BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005265
(705 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/679 (78%), Positives = 597/679 (87%), Gaps = 1/679 (0%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
+V DL +SSPFAKLLDSCLRS+S TR VHARI+ +QF+ EIFIQNRLIDVY KC C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L ARK+FD+M +N FTWNS+I+ L K GF+D+A+RLF SMPE DQCSWNSMVSGFAQH
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
DRF E+L YFVKMH E+F L+EYSFGSALSACAG +D MGTQVHAL+SKSRYS+DVYMG
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
SALIDMY KCG V+CA VF GM ERN+V+WNSLITCYEQNGPAS+ALEVFVRMM SG+E
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PDEVTLASVVSACASL A KEGLQIHAR+++ K R+DLVLGNALVDMYAKC K+NEAR
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VFDRM IRNVVSETSMVSGYA+A+SVK+AR MF+KM +RNVVSWNALIAGYTQNGENEEA
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LFRLLKRES+ PTHYTFGNLL+ACANLADL LGRQAHTHV+K G F SG ESDIFVG
Sbjct: 366 LRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVG 425
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NSLIDMYMKCGS+EDG R+FE M ERD VSWNA+IVG AQNGYG EAL +F+KML+CGEK
Sbjct: 426 NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK 485
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PDHVTMIGVLCACSHAGLVEEGR YF SM +EHGL PLKDHYTCMVDLLGRAGCL+EAK
Sbjct: 486 PDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKN 544
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
LIEAMP+ PDAV+WGSLLAACKVH NI +G++ A+KLLEI+P NSGPYVLLSNMYAELGR
Sbjct: 545 LIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGR 604
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
WG+VVRVRKLMR++GV KQPGCSWIE+ V+VF+VKDK HP K+IY VLKMLT +MKR
Sbjct: 605 WGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKR 664
Query: 670 VGYVPNASDDEAYEEQNGS 688
VGY+P+A+D EAY+EQ+ S
Sbjct: 665 VGYIPDANDFEAYDEQSKS 683
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/705 (73%), Positives = 603/705 (85%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
MA V+++VGDL+FLDSSPFAKLLD+C++SKSV + R VHARIIK+QF+SEIFIQNRL
Sbjct: 1 MAKHGLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRL 60
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+DVY KCG L ARKVFD M +N F+WN+++ L K+G +D+A LF MPERDQCSWN
Sbjct: 61 VDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWN 120
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+MVSGFAQ DRF EAL + V MHSE+F L+EYSFGSALSACAG +D +G Q+H L++KS
Sbjct: 121 AMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS 180
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
RYS DVYMGSAL+DMY KC V+ A+R FD M RNIVSWNSLITCYEQNGPA ALEVF
Sbjct: 181 RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
VRMM GIEPDE+TLASV SACASL+A +EGLQIHAR+M+ +K RNDLVLGNALVDMYAK
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C ++NEAR VFDRMP+R+VVSETSMVSGYAKASSVK+ARLMF+ M+ERNVVSWNALIAGY
Sbjct: 301 CRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGY 360
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
TQNGENEEA+ LF LLKRES+ PTHYTFGNLLNACANLADL+LGRQAHTH++KHG F S
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKS 420
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
GE+SDIFVGNSLIDMYMKCG VEDG +FE M+ERD VSWNAMIVG AQNGYGTEAL +F
Sbjct: 421 GEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIF 480
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
++ML+ GE+PDHVTMIGVL ACSHAGLVEEGR YF SM+ EHGL P+KDHYTCMVDLLGR
Sbjct: 481 REMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGR 540
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
AGCLDEA LI+ MPM+PDAV+WGSLLAACKVH NI LG+YVA++LLEI+P NSGPYVLL
Sbjct: 541 AGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLL 600
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SNMYAELGRW +VVRVRK MR+ GV+KQPGCSWI I H++VFMVKDKRHP K+IYL+L
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLIL 660
Query: 661 KMLTREMKRVGYVPNASDDEAYEEQNGSNSTSDCQIDFQVETAIA 705
K+LT +MKRVGYVP A DDE YEE++ S +++ V+ A+
Sbjct: 661 KILTEQMKRVGYVPEADDDEPYEEESDSELILHSEMETAVDAAVG 705
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/705 (73%), Positives = 602/705 (85%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
M V+++VG+L FLDSSPFAKLLDSC+RSKS D RR+HARIIK+QF+SEIFIQNRL
Sbjct: 1 MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+D Y KCG ARKVFD+M +N F++N++++ L K+G +D+A +F SMPE DQCSWN
Sbjct: 61 VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+MVSGFAQHDRF EAL +FV MHSE+F L+EYSFGSALSACAG D MG Q+HAL+SKS
Sbjct: 121 AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
RY DVYMGSAL+DMY KCG V+CA+R FDGM RNIVSWNSLITCYEQNGPA ALEVF
Sbjct: 181 RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
V MM +G+EPDE+TLASVVSACAS +A +EGLQIHAR+++ +K RNDLVLGNALVDMYAK
Sbjct: 241 VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C ++NEAR VFDRMP+RNVVSETSMV GYA+A+SVK+ARLMF+ M+E+NVVSWNALIAGY
Sbjct: 301 CRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGY 360
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
TQNGENEEA+ LF LLKRES+ PTHYTFGNLLNACANLADL+LGRQAHT ++KHG F S
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS 420
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
GEESDIFVGNSLIDMYMKCG VEDGC +FE MVERD VSWNAMIVG AQNGYGT AL +F
Sbjct: 421 GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIF 480
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+KML+ G+KPDHVTMIGVL ACSHAGLVEEGR+YF SM E GLAP+KDH+TCMVDLLGR
Sbjct: 481 RKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGR 540
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
AGCLDEA LI+ MPMQPD V+WGSLLAACKVH NI LG+YVA+KL+EI+P NSGPYVLL
Sbjct: 541 AGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLL 600
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SNMYAELGRW +VVRVRK MR+RGV+KQPGCSWIEI V+VFMVKDKRHPL K+I+LVL
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVL 660
Query: 661 KMLTREMKRVGYVPNASDDEAYEEQNGSNSTSDCQIDFQVETAIA 705
K LT +MK GYVP A DDE EE++ S +++ + +TA+A
Sbjct: 661 KFLTEQMKWAGYVPEADDDEICEEESDSELVLHFEMETEADTAVA 705
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 1082 bits (2797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/689 (72%), Positives = 596/689 (86%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F DSSPFAKLLD C++ +S D R VH R+I++ F E+FIQNRLIDVY KCG L ARK
Sbjct: 21 FTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARK 80
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFD+MS +NVF++NSII+ L++WGF+D+++ LF+ MPE+DQCSWNSM++GFAQHDRF EA
Sbjct: 81 VFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEA 140
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L +FV+MH ++F L++YSFGS LSAC+ D K+G Q+H L+SKS+YS DV+MGS LID
Sbjct: 141 LDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF 200
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG V CARRVFDGM E+N+VSWN LITCYEQNGPA +ALE F RM G +PDEVTL
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTL 260
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
ASVVSACA+LAAFKEG+QIHAR+++ +K RNDL+LGNALVDMYAKCG++NEARCVFDRMP
Sbjct: 261 ASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMP 320
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+RN VSET+MVSGYAK++SVK+AR MF + ++++VSWNALIAGYTQNGENEEALGLFR+
Sbjct: 321 VRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRM 380
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
LKRESVCPTHYTFGNLLNA ANLADL+LGRQAH+HVVKHG RF SGEE DIFVGNSLIDM
Sbjct: 381 LKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDM 440
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
YMKCGSVE+G R+FE MVE+D VSWN MI+G AQNGYG EAL LF+KML GEKPDHVTM
Sbjct: 441 YMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTM 500
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IG LCACSHAGLVEEGR+YF SM+KEHGL P+KDHYTCMVDLLGRAGCL+EAK LIE+MP
Sbjct: 501 IGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMP 560
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
QPDAV+W SLL+ACKVHRNI LG+YVA+K+ EI+P++SGPYVLL+NMY+ELGRWG+ V
Sbjct: 561 KQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVS 620
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VRKLMR+RGVVKQPGCSWI+I +V+VFMVKDKRHP KEIY +LK+LT+ M++ GYVP+
Sbjct: 621 VRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Query: 676 ASDDEAYEEQNGSNSTSDCQIDFQVETAI 704
ASD EAYEE + S+S ++ Q E A+
Sbjct: 681 ASDHEAYEEPSELESSSCFHMEMQAEAAV 709
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/679 (74%), Positives = 573/679 (84%), Gaps = 31/679 (4%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
+V DL +SSPFAKLLDSCLRS+S TR VHARI+ +QF+ EIFIQNRLIDVY KC C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L ARK+FD+M +N FTWNS+I+ L K GF+D+A+RLF SMPE DQCSWNSMVSGFAQH
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
DRF E+L YFVKMH E+F L+EYSFGSALSACAG +D MGTQVHAL+SKSRYS+DVYMG
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
SALIDMY KCG V+CA VF GM ERN+V+WNSLITCYEQNGPAS+ALEVFVRMM SG+E
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PDEVTLASVVSACASL A KEGLQIHAR+++ K R+DLVLGNALVDMYAKC K+NEAR
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VFDRM IRNVVSETSMVSGYA+A+SVK+AR MF+KM +RNVVSWNALIAGYTQNGENEEA
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LFRLLKRES+ PTHYTFGNLL +SDIFVG
Sbjct: 366 LRLFRLLKRESIWPTHYTFGNLL------------------------------KSDIFVG 395
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NSLIDMYMKCGS+EDG R+FE M ERD VSWNA+IVG AQNGYG EAL +F+KML+CGEK
Sbjct: 396 NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEK 455
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PDHVTMIGVLCACSHAGLVEEGR YF SM +EHGL PLKDHYTCMVDLLGRAGCL+EAK
Sbjct: 456 PDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKN 514
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
LIEAMP+ PDAV+WGSLLAACKVH NI +G++ A+KLLEI+P NSGPYVLLSNMYAELGR
Sbjct: 515 LIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGR 574
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
WG+VVRVRKLMR++GV KQPGCSWIE+ V+VF+VKDK HP K+IY VLKMLT +MKR
Sbjct: 575 WGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKR 634
Query: 670 VGYVPNASDDEAYEEQNGS 688
VGY+P+A+D EAY+EQ+ S
Sbjct: 635 VGYIPDANDFEAYDEQSKS 653
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/685 (71%), Positives = 571/685 (83%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
MA VK + GDL FLDSSPF+KLL+ C RS+S DT RVHA IIKS FASE FIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
IDVY KCGC+ ARK+FD+M +N+F+WNSII K GF+DDA +F MP+ DQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
SM+SGF QH RF EAL YF +MH F ++EYSFGSALSACAG D K+G+Q+H+L+ +S
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Y SDVYMGSAL+DMY KCGRV A+ VFD M R+ VSWNSLITCYEQNGP +AL++F
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
V M+ G+EPDEVTLASVVSACA+++A KEG QIHAR+++C++ RNDL+LGNAL+DMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C ++NEAR +FD MPIR+VVSETSMVSGYAKAS VK AR MF+ M+ ++V++WNALIAG
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
TQNGENEEAL LFRLLKRESV PTHYTFGNLLNACANLADLQLGRQAH+HV+KHG RF
Sbjct: 361 TQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQY 420
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
GE+SD+FVGNSLIDMYMKCGSVE+GCR+F+ M+E+D VSWNAMIVG AQNG+G +AL +F
Sbjct: 421 GEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
KML GE PDHVTMIGVLCACSHAGL++EGR YF SM+ +HGL PLKDHYTCMVDLLGR
Sbjct: 481 CKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGR 540
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
AG L+EAK LIE M MQPDA++WGSLLAACKVHRNI LGEYV KKLLE++P NSGPYVLL
Sbjct: 541 AGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLL 600
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SNMYAE W VVRVRKLMR+RGVVKQPGCSWIEI G +NVFMVKDKRH KEIY+VL
Sbjct: 601 SNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVL 660
Query: 661 KMLTREMKRVGYVPNASDDEAYEEQ 685
+ + ++MK+ GYVP +E E++
Sbjct: 661 RTILQQMKQAGYVPYVGSNEFDEDE 685
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/670 (69%), Positives = 558/670 (83%), Gaps = 3/670 (0%)
Query: 1 MATQRSVKQIVGDLA-FLDSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQN 58
MAT +S ++ DL+ F DSSPFAKLLDSC++SK S R VHA +IKS F++EIFIQN
Sbjct: 1 MAT-KSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQN 59
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
RLID Y+KCG L R+VFDKM +N++TWNS++TGL K GF+D+A LF SMPERDQC+
Sbjct: 60 RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WNSMVSGFAQHDR EAL YF MH E F L+EYSF S LSAC+G D G QVH+L++
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
KS + SDVY+GSAL+DMY KCG V+ A+RVFD M +RN+VSWNSLITC+EQNGPA +AL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
VF M+ S +EPDEVTLASV+SACASL+A K G ++H R+++ +KLRND++L NA VDMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AKC ++ EAR +FD MPIRNV++ETSM+SGYA A+S K+ARLMFTKM ERNVVSWNALIA
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GYTQNGENEEAL LF LLKRESVCPTHY+F N+L ACA+LA+L LG QAH HV+KHG +F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
SGEE DIFVGNSLIDMY+KCG VE+G +F M+ERD VSWNAMI+G AQNGYG EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
LF++ML GEKPDH+TMIGVL AC HAG VEEGR YFSSM+++ G+APL+DHYTCMVDLL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L+EAK++IE MPMQPD+VIWGSLLAACKVHRNI LG+YVA+KLLE+EPSNSGPYV
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSNMYAELG+W +V+ VRK MRK GV KQPGCSWI+I GH +VFMVKDK HP K+I+
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 659 VLKMLTREMK 668
+L +L EM+
Sbjct: 660 LLDILIAEMR 669
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/663 (70%), Positives = 553/663 (83%), Gaps = 2/663 (0%)
Query: 9 QIVGDLA-FLDSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
++ GDL+ F SSPFAKLLDSC++ K S D R VHA +IKS F++E+FIQNRLID YAK
Sbjct: 8 KLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAK 67
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG L R++FDKM +NVFTWNS++TGL K GF+D+A LF SMPERDQC+WNSMVSGF
Sbjct: 68 CGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
AQHDR EAL YF MH E F L+EY+F S LSAC+G D G Q+H+L++KS SDV
Sbjct: 128 AQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDV 187
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
Y+GSAL+DMY KCG V+ A++VFD M +RN+VSWNSLITCYEQNGPA +AL+VF M+ S
Sbjct: 188 YIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLES 247
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
+EPDEVTLASV+SACASL+A K G ++HAR+++ +KLRND++L NA VDMYAKC ++ E
Sbjct: 248 WVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKE 307
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR +FD MPIRNV++ETSMVSGYA A+S K+ARLMFTKM ERNVVSWNALIAGYTQNGEN
Sbjct: 308 ARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGEN 367
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EEAL LF LLKRESVCPTHYTF N+L ACA+LADL LG QAH HV+KHG +F SGEE DI
Sbjct: 368 EEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDI 427
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FVGNSLIDMY+KCG VE+G +F M+ERD VSWNAMI+G AQNGYG EAL LF++ML
Sbjct: 428 FVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDS 487
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
GEKPDH+TMIGVL AC HAG VEEGR YFSSM+++ G+APL+DHYTCMVDLLGRAG L+E
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
AK++IE MP+QPD+VIWGSLLAACKVHRNI LG+YVA+KL E+E SNSGPYVLLSNMYAE
Sbjct: 548 AKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAE 607
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
LG+WG+ + VRKLMRK GV KQPGCSWI+I GH +VFMVKDK HP K+I+ +L +L E
Sbjct: 608 LGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAE 667
Query: 667 MKR 669
M++
Sbjct: 668 MRQ 670
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/524 (77%), Positives = 470/524 (89%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
M+ VK+IVGDL+FLDSSPFAKLLDSCL+SKS+ DTRR+HARIIK+QFA E+FIQNRL
Sbjct: 1 MSKHGFVKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRL 60
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
ID Y KCGC ARK+FD+M KNVF+WN+I++ L+K GF+D+ +RLF SMPE DQCSWN
Sbjct: 61 IDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWN 120
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
S+++GFAQHDRF EAL YFVKMH + F L+EY+FGS LSACAG D K+GTQ+H L+ KS
Sbjct: 121 SLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKS 180
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
++ DVYMGSALID+Y KCG V CA+RVFDGM ERN+VSWNSLITCYEQNGP+ +ALE+F
Sbjct: 181 QFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIF 240
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+RMM SG EPDEVTLASVVSACASLAA K+GL+IHA +++ +KLR+DL+L NALVDMYAK
Sbjct: 241 MRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAK 300
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG++NEARCVFDRMPIRNVVSETSMVSGYAK +SVK+ARL+FTKM+ERNVVSWNALIAGY
Sbjct: 301 CGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGY 360
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
TQNGENEEAL LFR+LKRE++CPTHYTFGNLLNACANLADLQLGRQAH HV+KHG RF
Sbjct: 361 TQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKHGFRFQY 420
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
GEESD+FVGN+LIDMYMKCGSVE+GCRIFE MVERD+VSWNAMIVG AQNGYG EALGLF
Sbjct: 421 GEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLF 480
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
+KML GEKPDHVTMIG LCACSHAGLV+EGRK+FSSM++E+GL
Sbjct: 481 RKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGL 524
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 205/375 (54%), Gaps = 11/375 (2%)
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D A ++ +C + ++ +IHAR+++ + ++ + N L+D Y KCG ++AR +
Sbjct: 18 DSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQ-FAYEVFIQNRLIDAYGKCGCFDDARKI 76
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FD+MP +NV S ++VS K+ + +F M E + SWN+LIAG+ Q+ EEAL
Sbjct: 77 FDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEAL 136
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
F + R+ YTFG+ L+ACA L DL++G Q H GL S D+++G+
Sbjct: 137 NYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIH------GLMLKSQFLLDVYMGS 190
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+LID+Y KCG V+ R+F+ M+ER+ VSWN++I QNG EAL +F +M+ G +P
Sbjct: 191 ALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEP 250
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D VT+ V+ AC+ ++G + + + K L +VD+ + G ++EA+ +
Sbjct: 251 DEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCV 310
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
+ MP++ + V S+++ ++ + K++E N + L Y + G
Sbjct: 311 FDRMPIR-NVVSETSMVSGYAKTASVKAARLLFTKMIE---RNVVSWNALIAGYTQNGEN 366
Query: 611 GEVVRVRKLMRKRGV 625
E +R+ +++++ +
Sbjct: 367 EEALRLFRMLKREAI 381
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/654 (57%), Positives = 506/654 (77%), Gaps = 5/654 (0%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
SSP A LL S + ++S R HARI+KS A E F+ N L+ YA+ G L AR+VFD
Sbjct: 20 SSPLADLLRS---APNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFD 76
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR--FSEAL 136
++ +N F++N++++ + G D+A LF ++P+ DQCS+N++V+ A+H R ++AL
Sbjct: 77 EIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADAL 136
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ MH+++F L+ YSF SALSACA D + G QVH L+++S ++ DV++ SAL+DMY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMY 196
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC R ARRVFD M ERN+VSWNSLITCYEQNGP +AL +FV MMA+G PDEVTL+
Sbjct: 197 AKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLS 256
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SACA LAA +EG Q+HA +++C++LR+D+VL NALVDMYAKCG+ EARC+FD MP
Sbjct: 257 SVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++VSETS+++GYAK+++V+ A+++F++M+E+NV++WN LIA Y QNGE EEA+ LF L
Sbjct: 317 RSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
KR+S+ PTHYT+GN+LNAC N+ADLQLG+QAH HV+K G RF G ESD+FVGNSL+DMY
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+K GS++DG ++FE M RD VSWNAMIVG AQNG +AL LF++ML E PD VTMI
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC H+GLV+EGR+YF SM+++HG+ P +DHYTCMVDLLGRAG L EA+ LI MPM
Sbjct: 497 GVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPM 556
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD+V+W SLL AC++H+N+ LGE+ A +L E++P NSGPYVLLSNMYAE+G+W EV RV
Sbjct: 557 EPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRV 616
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
R+ M+ RGV KQPGCSWIEI +NVF+ +DKRHP EI+ L+++ EM R
Sbjct: 617 RRSMKDRGVSKQPGCSWIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEMGRT 670
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 225/508 (44%), Gaps = 119/508 (23%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R + + D L++ FA L +C K +VH + +S A ++ I++ L+D+Y
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMY 196
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AKC AR+VFD M +NV +WNS+IT C
Sbjct: 197 AKCERPEDARRVFDAMPERNVVSWNSLIT-----------------------C------- 226
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYS 183
+ Q+ EAL FV+M + F+ E + S +SACAG + G QVHA + K R
Sbjct: 227 -YEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLR 285
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMR------------------------------ 213
D+ + +AL+DMY KCGR AR +FD M
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQM 345
Query: 214 -ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E+N+++WN LI Y QNG +A+ +FV++ I P T +V++AC ++A + G
Sbjct: 346 VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQ 405
Query: 273 QIHARLMRCEKLR------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
Q H +++ E R +D+ +GN+LVDMY K G +++ VF+RM R+ VS +M+
Sbjct: 406 QAHVHVLK-EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMI 464
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
GYA QNG ++AL LF + + P
Sbjct: 465 VGYA-------------------------------QNGRAKDALHLFERMLCSNENPDSV 493
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCG 440
T +L+AC H+ +V G R+ D + S ++D+ + G
Sbjct: 494 TMIGVLSAC-----------GHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAG 542
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGC 467
+++ + M +E D V W +++ C
Sbjct: 543 HLKEAEELINDMPMEPDSVLWASLLGAC 570
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/661 (58%), Positives = 501/661 (75%), Gaps = 3/661 (0%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+P A LL S + + R HAR ++S FA E F+ N L+ YA+ G L+ AR+VFD
Sbjct: 18 SAPLADLLRS---APGLRAARAAHARALRSPFAGETFLLNTLLSAYARLGSLHDARRVFD 74
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
M ++N F++N++++ + G DDA LF ++P+ DQCS+N++V+ AQH R +AL +
Sbjct: 75 GMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRF 134
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
MH+++F L+ YSF SALSACA + G QVHAL++KS + SDVY+G+AL+DMY K
Sbjct: 135 LAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAK 194
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C R A++VFD M ERNIVSWNSLITCYEQNGP +AL +FVRMM G PDEVTLASV
Sbjct: 195 CERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASV 254
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA LAA +EG Q+H R+++ ++ R D+VL NALVDMYAKCG+ EA+CVFDRM IR+
Sbjct: 255 MSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS 314
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
VVSETSM++GYAK+++V A+ +F +M+E+NVV+WN LIA Y N E EEAL LF LKR
Sbjct: 315 VVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKR 374
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
ESV PTHYT+GN+LNACANLA+LQLG+QAH HV+K G RF SG ESD+FVGNSL+DMY+K
Sbjct: 375 ESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLK 434
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
GS+ DG ++FE M RD VSWNAMIVG AQNG +AL LF++ML E+PD VTMIGV
Sbjct: 435 TGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGV 494
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC H+GLV+EGR+YF SM+++HG+ P +DHYTCM+DLLGRAG L E + LIE MPM+P
Sbjct: 495 LSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEP 554
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
DAV+W SLL AC++H+NI +GE+ A KL E++P NSGPYVLLSNMYAELG+W +V RVR+
Sbjct: 555 DAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRR 614
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
M+ RGV KQPGCSWIEI VNVF+ +D HP EI+ L+++ +M R+ +D
Sbjct: 615 SMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSIDAEIAD 674
Query: 679 D 679
D
Sbjct: 675 D 675
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 227/508 (44%), Gaps = 119/508 (23%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R + + D L++ FA L +C K+ +VHA + KS S+++I L+D+Y
Sbjct: 133 RFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMY 192
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AKC A+KVFD M +N+ +WNS+IT + G +D
Sbjct: 193 AKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVD---------------------- 230
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYS 183
EAL FV+M + F E + S +SACAG + G QVH + KS R+
Sbjct: 231 ---------EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMR------------------------------ 213
D+ + +AL+DMY KCGR A+ VFD M
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQM 341
Query: 214 -ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E+N+V+WN LI Y N +AL +FVR+ + P T +V++ACA+LA + G
Sbjct: 342 VEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQ 401
Query: 273 QIHARLMRCEKLR------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
Q H +++ E R +D+ +GN+LVDMY K G +++ VF+RM R+ VS +M+
Sbjct: 402 QAHVHVLK-EGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMI 460
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
GYA+ K A L+F +ML NE P
Sbjct: 461 VGYAQNGRAKDALLLFERML-----------------CSNER--------------PDSV 489
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCG 440
T +L+AC H+ +VK G R+ D + + +ID+ + G
Sbjct: 490 TMIGVLSAC-----------GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAG 538
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGC 467
+++ + E M +E D V W +++ C
Sbjct: 539 HLKEVEELIENMPMEPDAVLWASLLGAC 566
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/652 (57%), Positives = 499/652 (76%), Gaps = 3/652 (0%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+P A LL S + ++ R HAR +KS F +E F+ N L+ YA+ G L AR+VFD
Sbjct: 763 SAPLADLLRS---APNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFD 819
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++ + N F++N++++ + G DA LF ++P+ DQCS+N++++ AQH R ++AL +
Sbjct: 820 EIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLF 879
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
MH+++F L+ YSF SALSACA D + G QVHAL+SKS ++ DVY+GSAL+DMY K
Sbjct: 880 LAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAK 939
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C ARRVF+ M ERNIVSWNSLITCYEQNGP +AL +FV MM +G PDEVTLASV
Sbjct: 940 CEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASV 999
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA LAA +EG Q+HAR+++ ++ R D+VL NALVDMYAKCG+ ARCVFDRM R+
Sbjct: 1000 MSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRS 1059
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
VVSETS+++GYA++++V+ A+++F++M+E+NV++WN LIA Y QNGE EEAL LF LKR
Sbjct: 1060 VVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKR 1119
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
ESV PTHYT+GN+LNAC N+ADLQLG+QAH HV+K G RF G ESD+FVGNSL+DMY+K
Sbjct: 1120 ESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLK 1179
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
GS++DG ++FE M RD VSWNAMIVG AQNG +AL LF++ML E PD VTMIGV
Sbjct: 1180 TGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGV 1239
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC H+GLVEEGR+YF SM+++HG+ P +DHYTCM+DLLGRAG L E + LI+ M M+P
Sbjct: 1240 LSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEP 1299
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
DAV+W SLL +C++H+N+ +GE+ A KL E++P NSGPYVLLSNMYAELG+W +V RVR
Sbjct: 1300 DAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRS 1359
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
M+ RGV KQPGCSWIEI V+VF+ +D HP EI+ +L+++ +M RV
Sbjct: 1360 SMKHRGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRV 1411
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 284/608 (46%), Gaps = 102/608 (16%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A +L C + R++H I K F S + + L+DVY C L AR+ FD +
Sbjct: 155 ASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILE 214
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
N SWN +V + A+ F +M
Sbjct: 215 PNAI-------------------------------SWNVIVRRYHLAGMGDMAVDMFFRM 243
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-- 200
S Y+ A+ AC + + G +HA + + Y V++ S+++DMY KCG
Sbjct: 244 LSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAM 303
Query: 201 -----------------------------RVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
R++ A+RVF+GM+ERN+VSWN+++T Y ++
Sbjct: 304 DAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSM 363
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ AL +F +M E D +TL SV+SAC + +G ++HA ++C + +L
Sbjct: 364 DLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKC-GFFSSPILK 422
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NALV MY+KCG L A +R+ L+F ER+
Sbjct: 423 NALVRMYSKCGCLRSA----ERL-------------------------LLFEMGSERDSY 453
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTH 410
SWN+LI+GY ++ +E AL + L K +S V P TF + L ACAN+ L+ G Q H +
Sbjct: 454 SWNSLISGYERHSMSEAAL--YALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAY 511
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
+++ G E D + + LIDMY KC + RIFE RD + WN+MI GCA +
Sbjct: 512 MIRKGY------EIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYS 565
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G G L LF +M G K D VT +G L +C G V GR YF+ M E + P +H
Sbjct: 566 GKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEH 624
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
Y CM++LLG+ GC+ E + +E MP +P +W + C+ + N LGE AK + +
Sbjct: 625 YECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSN 684
Query: 591 PSNSGPYV 598
P +V
Sbjct: 685 PLTPVQFV 692
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 265/488 (54%), Gaps = 12/488 (2%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
F +N I L G + DA LF MP RD SWN++++ ++ SEAL F M+S
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + S LS CA +D Q+H ++K + S+V +G+AL+D+YG C ++
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
ARR FD + E N +SWN ++ Y G A+++F RM+++G+ P T++ V AC
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRD 264
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
A +EG IHA ++R + + + +++VDMYAKCG ++ A+ +F+ P++++V TS
Sbjct: 265 NNALEEGRCIHAFVLR-HGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTS 323
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
+VSG A + A+ +F M ERN+VSWNA++ GY ++ + AL LF+ +++E+
Sbjct: 324 IVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFD 383
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T G++L+AC + D+ G + H +K G F S + N+L+ MY KCG +
Sbjct: 384 AITLGSVLSACTGILDIGKGEEVHAFAIKCG--FFSSP----ILKNALVRMYSKCGCLRS 437
Query: 445 GCR--IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
R +FE ERD SWN++I G ++ AL KM P+ T L AC
Sbjct: 438 AERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAAC 496
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++ L+++G + + M ++ G + ++D+ + D + + EA P + D ++
Sbjct: 497 ANIFLLKQGMQIHAYMIRK-GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSR-DVIL 554
Query: 563 WGSLLAAC 570
W S++ C
Sbjct: 555 WNSMIFGC 562
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 217/456 (47%), Gaps = 87/456 (19%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++ FA L +C K +VHA + KS A +++I + L+D+YAKC AR+V
Sbjct: 890 LNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRV 949
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ M +N+ +WNS+IT C + Q+ EAL
Sbjct: 950 FEAMPERNIVSWNSLIT-----------------------C--------YEQNGPVGEAL 978
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDM 195
FV M F E + S +SACAG + G QVHA + KS R+ D+ + +AL+DM
Sbjct: 979 VLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDM 1038
Query: 196 YGKCGRVSCARRVFDGMR-------------------------------ERNIVSWNSLI 224
Y KCGR AR VFD M E+N+++WN LI
Sbjct: 1039 YAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLI 1098
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y QNG +AL +FVR+ + P T +V++AC ++A + G Q H +++ E
Sbjct: 1099 AAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLK-EGF 1157
Query: 285 R------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
R +D+ +GN+LVDMY K G +++ VF+RM R+ VS +M+ G+A+ K A
Sbjct: 1158 RFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDA 1217
Query: 339 RLMFTKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPT--HYTFGNL 391
+F +ML + V+ +++ +G EE FR + + + P+ HYT
Sbjct: 1218 LHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYT---- 1273
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
C + DL LGR H V+ ++ +S E +
Sbjct: 1274 ---C--MIDL-LGRAGHLKEVEELIKEMSMEPDAVL 1303
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 200/436 (45%), Gaps = 74/436 (16%)
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I+ CG V+ AR +FD M R+ SWN++IT + G S+AL +F M + GI P +
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ASV+S CA Q+H + + +++++LG ALVD+Y C L +AR FD
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAK-RDFQSNVILGTALVDVYGNCFLLADARRAFD 210
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+LE N +SWN ++ Y G + A+ +
Sbjct: 211 -------------------------------DILEPNAISWNVIVRRYHLAGMGDMAVDM 239
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + V P YT + + AC + L+ GR H V++HG E + V +S+
Sbjct: 240 FFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGY------EHHVHVRSSV 293
Query: 433 IDMYMKCGSVE-------------------------------DGCRIFETMVERDWVSWN 461
+DMY KCG+++ D R+FE M ER+ VSWN
Sbjct: 294 VDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWN 353
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR-KYFSSMSK 520
AM+ G ++ T AL LF++M + D +T+ VL AC+ G+++ G+ + + +
Sbjct: 354 AMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIGKGEEVHAFAI 411
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEA-KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+ G +V + + GCL A + L+ M + D+ W SL++ + H
Sbjct: 412 KCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAA 471
Query: 580 EYVAKKLL-EIEPSNS 594
Y K+ E+ P+ S
Sbjct: 472 LYALTKMQSEVTPNQS 487
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 140/622 (22%), Positives = 240/622 (38%), Gaps = 109/622 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK- 75
D+ +L +C + VHA IK F S ++N L+ +Y+KCGCL A +
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 76 -VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+F+ S ++ ++WNS+I SG+ +H
Sbjct: 442 LLFEMGSERDSYSWNSLI-------------------------------SGYERHSMSEA 470
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL KM SE ++ +F SAL+ACA K G Q+HA + + Y D + S LID
Sbjct: 471 ALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLID 529
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KC + + R+F+ R+++ WNS+I +G L++F M GI+ D VT
Sbjct: 530 MYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVT 589
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ +C S + G + + LM E + + ++++ K G + E + M
Sbjct: 590 FLGALVSCISEGHVRLG-RSYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHM 648
Query: 315 PIRNVVS-------------ETSMVSGYAK----ASSVKSARLMFTKMLERNVVSWNALI 357
P + + AK ++ + + + T E N A
Sbjct: 649 PFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDGGREAES 708
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYT-----------------FGNLLNACANLAD 400
++ GE E L + P T F + L A A LAD
Sbjct: 709 TSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYGMARHHHHHFVSHLRASAPLAD 768
Query: 401 -LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L+ H S ++ F+ N+L+ Y + G + D R+F+ + + S
Sbjct: 769 LLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFS 828
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
+NA++ A+ G +A LF + PD + V+ A + + + ++M
Sbjct: 829 YNALLSAHARLGRPADARALFHAI----PDPDQCSYNAVIAALAQHSRGADALLFLAAMH 884
Query: 520 KE----------------------------HGLAPLKDHY------TCMVDLLGRAGCLD 545
+ H L H + ++D+ + +
Sbjct: 885 ADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPE 944
Query: 546 EAKTLIEAMPMQPDAVIWGSLL 567
EA+ + EAMP + + V W SL+
Sbjct: 945 EARRVFEAMP-ERNIVSWNSLI 965
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/654 (56%), Positives = 497/654 (75%), Gaps = 5/654 (0%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
SSP A LL S + S+ R H ++KS A E F+ N L+ YA+ G L AR+VFD
Sbjct: 20 SSPLADLLRS---APSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFD 76
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR--FSEAL 136
+ +N F++N++++ + G D+A LF ++P+ DQCS+N++V+ A+H R +AL
Sbjct: 77 GIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDAL 136
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ MH+++F L+ YSF SALSACA D + G QVH L+++S ++ DV++G+AL+DMY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY 196
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC R ARRVFD M ERN+VSWNSLITCYEQNGP +AL +FV MMA+G PDEVTL+
Sbjct: 197 AKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLS 256
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SACA LAA +EG Q+HA +++ ++LR+D+VL NALVDMYAKCG+ EARC+FD MP
Sbjct: 257 SVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+VVSETS+++GYAK+++V+ A+++F++M+E+NV++WN LIA Y QNGE EEA+ LF L
Sbjct: 317 RSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
KR+S+ PTHYT+GN+LNAC N+A LQLG+QAH HV+K G RF G ESD+FVGNSL+DMY
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 436
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+K GS++DG ++FE M RD VSWNAMIVG AQNG +AL LF++ML E PD VTMI
Sbjct: 437 LKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMI 496
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC H+GLV+EGR++F M+++HG+ P +DHYTCMVDLLGRAG L EA+ LI+ MP
Sbjct: 497 GVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPT 556
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD+V+W SLL AC++H+N+ LGE A +L E++P NSGPYVLLSNMYAE+G+W +V RV
Sbjct: 557 EPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRV 616
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
R+ M+ RGV KQPGCSWIEI +NVF+ +D RHP EI+ L+++ EM R
Sbjct: 617 RRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRT 670
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 227/504 (45%), Gaps = 111/504 (22%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R + + D L++ FA L +C K + +VH + +S A ++ I L+D+Y
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY 196
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AKC AR+VFD M +NV +WNS+IT C
Sbjct: 197 AKCERPVDARRVFDAMPERNVVSWNSLIT-----------------------C------- 226
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYS 183
+ Q+ EAL FV+M + F E + S +SACAG + G QVHA ++ + R
Sbjct: 227 -YEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLR 285
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMR------------------------------ 213
D+ + +AL+DMY KCGR AR +FD M
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQM 345
Query: 214 -ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E+N+++WN LI Y QNG +A+ +FV++ I P T +V++AC ++A + G
Sbjct: 346 VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQ 405
Query: 273 QIHARLMRCEKLR------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
Q H +++ E R +D+ +GN+LVDMY K G +++ VF+RM R+ VS +M+
Sbjct: 406 QAHVHVLK-EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMI 464
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
GYA QNG ++AL LF + + P
Sbjct: 465 VGYA-------------------------------QNGRAKDALHLFERMLCSNENPDSV 493
Query: 387 TFGNLLNACANLADLQLGRQAHTHVV--KHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T +L+AC + + GR+ H H + HG+ D + ++D+ + G +++
Sbjct: 494 TMIGVLSACGHSGLVDEGRR-HFHFMTEDHGIT----PSRDHYT--CMVDLLGRAGHLKE 546
Query: 445 GCRIFETM-VERDWVSWNAMIVGC 467
+ + M E D V W +++ C
Sbjct: 547 AEELIKDMPTEPDSVLWASLLGAC 570
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 263/428 (61%), Positives = 345/428 (80%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
MMA+G PDEVTL+SV+SACA LAA +EG Q+HA +++ ++LR+D+VL NALVDMYAKCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+ EARC+FD MP R+VVSETS+++GYAK+++V+ A+++F++M+E+NV++WN LIA Y Q
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NGE EEA+ LF LKR+S+ PTHYT+GN+LNAC N+A LQLG+QAH HV+K G RF G
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGP 180
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
ESD+FVGNSL+DMY+K GS++DG ++FE M RD VSWNAMIVG AQNG +AL LF++
Sbjct: 181 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFER 240
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML E PD VTMIGVL AC H+GLV+EGR++F M+++HG+ P +DHYTCMVDLLGRAG
Sbjct: 241 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAG 300
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L EA+ LI+ MP +PD+V+W SLL AC++H+N+ LGE A +L E++P NSGPYVLLSN
Sbjct: 301 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSN 360
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MYAE+G+W +V RVR+ M+ RGV KQPGCSWIEI +NVF+ +D RHP EI+ L++
Sbjct: 361 MYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRI 420
Query: 663 LTREMKRV 670
+ EM R
Sbjct: 421 IQMEMCRT 428
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 167/307 (54%), Gaps = 7/307 (2%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGAR 74
F D + ++ +C + + R+VHA ++K + ++ + N L+D+YAKCG + AR
Sbjct: 7 FPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEAR 66
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD M +++V + SI+ G K ++DA +F+ M E++ +WN +++ +AQ+ E
Sbjct: 67 CIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEE 126
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY------SSDVYM 188
A+ FV++ ++ + Y++G+ L+AC ++G Q H + K + SDV++
Sbjct: 127 AIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFV 186
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G++L+DMY K G + +VF+ M R+ VSWN++I Y QNG A DAL +F RM+ S
Sbjct: 187 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNE 246
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD VT+ V+SAC EG + + + +VD+ + G L EA
Sbjct: 247 NPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAE 306
Query: 309 CVFDRMP 315
+ MP
Sbjct: 307 ELIKDMP 313
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 168/367 (45%), Gaps = 80/367 (21%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCG 200
M + F E + S +SACAG + G QVHA ++ + R D+ + +AL+DMY KCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 201 RVSCARRVFDGMR-------------------------------ERNIVSWNSLITCYEQ 229
R AR +FD M E+N+++WN LI Y Q
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR---- 285
NG +A+ +FV++ I P T +V++AC ++A + G Q H +++ E R
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLK-EGFRFDFG 179
Query: 286 --NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+D+ +GN+LVDMY K G +++ VF+RM R+ VS +M+ GYA
Sbjct: 180 PESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYA------------- 226
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
QNG ++AL LF + + P T +L+AC + +
Sbjct: 227 ------------------QNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDE 268
Query: 404 GRQAHTHVV--KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSW 460
GR+ H H + HG+ D + ++D+ + G +++ + + M E D V W
Sbjct: 269 GRR-HFHFMTEDHGIT----PSRDHYT--CMVDLLGRAGHLKEAEELIKDMPTEPDSVLW 321
Query: 461 NAMIVGC 467
+++ C
Sbjct: 322 ASLLGAC 328
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/621 (43%), Positives = 388/621 (62%), Gaps = 7/621 (1%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H K F + ++ ++D+Y KCG + A+KVF + N ++F WNS+I G K+G
Sbjct: 135 QLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYG 194
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+ A LFA MPERD SWN+M+S +QH +E L F++M ++ F + ++ S LS
Sbjct: 195 SVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLS 254
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
AC D + G +HA + + DVY G LIDMY KCGR+ AR+VFDG+ E N VS
Sbjct: 255 ACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVS 314
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W SLI Q G +AL +F +M + D+ TLA+V+ C S G Q+HA +
Sbjct: 315 WTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTI 374
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
L + + + NALV MYAKCG + +A F+ MPIR+++S T+M++ +++A V+ AR
Sbjct: 375 -TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAR 433
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F KM ERNV+SWN+++A Y Q G EE L ++ + RE V TF ++ACA+LA
Sbjct: 434 EYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLA 493
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L LG Q K G S++ V NS++ MY +CG +E+ ++F ++V ++ VS
Sbjct: 494 VLILGNQILAQAEKLGF------SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVS 547
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNAM+ G AQNG G + + +F+KML G PD ++ + VL CSH+G V EG+ YF SM+
Sbjct: 548 WNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMT 607
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
K+HG++P+ +H+ CMVDLLGRAG L++AK LI MP +P+A IWG+LLAAC++H N L
Sbjct: 608 KDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLA 667
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E K LLE++ G Y LL+N+Y+E G+ V VRKLMR +GV K PGCSWIE+
Sbjct: 668 ELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNR 727
Query: 640 VNVFMVKDKRHPLNKEIYLVL 660
V+VF V D HP K+++ +L
Sbjct: 728 VHVFTVDDTNHPQIKDVHRML 748
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 283/594 (47%), Gaps = 86/594 (14%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F + + C +S+ R++HA++I S IF+QN L+++Y+ CG + A +VF
Sbjct: 4 SQKFYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFG 63
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF------ 132
+ NV++WN++I+G G + +A +LF MPERD SWNSM+SG+ +
Sbjct: 64 GIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKA 123
Query: 133 SEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-----SSDV 186
S +LGY + + FA ++ FG + C + M + A+ + + +
Sbjct: 124 SGSLGYLKLALQLHGFA-EKFDFG--IDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSL 180
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ +++I Y K G V A +F M ER+ VSWN++I+ Q+G ++ L F+ M
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G P+ +T ASV+SAC S+ + G +HAR++R E D+ G L+DMYAKCG+L
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCL-DVYAGCGLIDMYAKCGRLES 299
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR VFD + N VS TS++ G A+A G
Sbjct: 300 ARQVFDGLTEHNAVSWTSLIGGVAQA-------------------------------GFQ 328
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EEAL LF ++ V +T +L C + D+ +G Q H H + GL +S +
Sbjct: 329 EEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGL------DSSV 382
Query: 427 FVGNSLIDMYMKC-------------------------------GSVEDGCRIFETMVER 455
V N+L+ MY KC G VE F+ M ER
Sbjct: 383 PVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPER 442
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
+ +SWN+M+ Q GY E L ++ +ML G K D +T + AC+ ++ G +
Sbjct: 443 NVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQIL 502
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ K G + +V + R G ++EA+ + ++ M+ + V W +++A
Sbjct: 503 AQAEK-LGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK-NLVSWNAMMAG 554
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 192/368 (52%), Gaps = 4/368 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L CL K +S ++HA I S + + N L+ +YAKCG ++ A F
Sbjct: 346 DQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAF 405
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M +++ +W ++IT + G ++ A F MPER+ SWNSM++ + Q + E L
Sbjct: 406 ELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLK 465
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+++M E +F +++SACA +G Q+ A K +SS+V + ++++ MY
Sbjct: 466 VYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYS 525
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG++ A+++F + +N+VSWN+++ Y QNG +E+F +M+ G PD+++ S
Sbjct: 526 RCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVS 585
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C+ EG + + + +VD+ + G+L +A+ + ++MP +
Sbjct: 586 VLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFK 645
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV---SWNALIAGYTQNGENEEALGLF 373
N ++++ + K A L +LE + S+ L Y+++G+ + +
Sbjct: 646 PNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVR 705
Query: 374 RLLKRESV 381
+L++ + V
Sbjct: 706 KLMRDKGV 713
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 223/489 (45%), Gaps = 106/489 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +A +L +C + +HARI++ + +++ LID+YAKCG L AR+VF
Sbjct: 245 NSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVF 304
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D ++ N +W S+I G+ + GF ++A LF M E
Sbjct: 305 DGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMRE------------------------ 340
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
V + S+ F L+ + L C D +G Q+HA S V + +AL+ MY
Sbjct: 341 --VPVASDQFTLA-----TVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 393
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
KC G V AR FD M ERN++SWNS++
Sbjct: 394 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 453
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL-- 284
Y Q G + L+V+++M+ G++ D +T ++ +SACA LA G QI L + EKL
Sbjct: 454 YMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQI---LAQAEKLGF 510
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+++ + N++V MY++CG++ EA+ +F + ++N+VS +M++GYA
Sbjct: 511 SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYA-------------- 556
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
QNG+ + + +F + P ++ ++L+ C++ + G
Sbjct: 557 -----------------QNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEG 599
Query: 405 RQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
+ + K HG+ + S+ FV ++D+ + G +E + M + + W A
Sbjct: 600 QYYFLSMTKDHGISPM----SEHFV--CMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGA 653
Query: 463 MIVGCAQNG 471
++ C +G
Sbjct: 654 LLAACRIHG 662
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/720 (38%), Positives = 426/720 (59%), Gaps = 47/720 (6%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S P+ L L+ K + +HARIIK+ +F+ N L++ YAK G +Y A +VFD
Sbjct: 13 SDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFD 72
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+M K+VF+WN I++G K G +++A R+F MPE D SW +M+ G+ Q +F A+G
Sbjct: 73 EMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGM 132
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M S++ ++++ + L++CA +G +VH+ + K SS + + ++L++MY K
Sbjct: 133 FREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAK 192
Query: 199 CGRVSCARRVFDGMR-------------------------------ERNIVSWNSLITCY 227
G A+ VFD M+ ER++VSWN++I+ Y
Sbjct: 193 SGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGY 252
Query: 228 EQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q+G +AL++F +M M S +PD+ TLAS +SACA+L K G QIHA ++R E
Sbjct: 253 NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTE-FDT 311
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRN--VVSETSMVSGYAKASSVKSARLMFTK 344
+GNAL+ MY+K G + A+ + ++ I N V++ T+++ GY K + AR +F
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDS 371
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+ R+VV+W A+I GY QNG N++A+ LFR + +E P +YT +L+ ++LA L G
Sbjct: 372 LRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHG 431
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
RQ H + SG S + V N+LI MY K GS+ D +F + +RD ++W +M
Sbjct: 432 RQIHASATR------SGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I+ AQ+G G EAL LF++ML G KPDH+T +GVL AC+H GLVE+GR Y++ M H
Sbjct: 486 IIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHK 545
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P HY CM+DL GRAG L EA IE MP++PD + WGSLLA+CKVH+N+ L E A
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAA 605
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
++LL IEP NSG Y L+N+Y+ G+W +RK M+ +GV K G SW++I V++F
Sbjct: 606 ERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
V D HP IY ++ + +E+K++G+VP+ +E +EQ S+ + I F
Sbjct: 666 GVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAF 725
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 198/371 (53%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L +C +++ +++HA II+++F + + N LI +Y+K G + A+K+
Sbjct: 277 DKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKII 336
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ +SN +V + +++ G +K G I+ A R+F S+ RD +W +M+ G+ Q+ +A
Sbjct: 337 EQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDA 396
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M E + Y+ + LS + G Q+HA ++S +S V + +ALI M
Sbjct: 397 MELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITM 456
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ AR VF+ + +R+ ++W S+I Q+G +AL +F RM+ +GI+PD +T
Sbjct: 457 YAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHIT 516
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC + ++G + + K+ ++D++ + G L EA + M
Sbjct: 517 YVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENM 576
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
PI +V++ S+++ +V+ A + ++L N +++AL Y+ G+ E A
Sbjct: 577 PIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAA 636
Query: 371 GLFRLLKRESV 381
+ + +K + V
Sbjct: 637 NIRKSMKDKGV 647
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 275/690 (39%), Positives = 410/690 (59%), Gaps = 42/690 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L + +R K R VH +IIK +++ N L+ YAK G L A VFD+M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+ F+WN++I+G K G + + RL MP+ D SW +++ G+ Q F A+ F K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE S+++ + LS+CA + +G ++H+ + K S V + ++L++MY KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 202 VSCARRVFD-------------------------------GMRERNIVSWNSLITCYEQN 230
A+ VFD M +R+IVSWNS+I+ Y Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 231 GPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL +F +M+ ++PD TLAS++SACA+L G QIHA ++R E + V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 290 LGNALVDMYAKCGKLNEARCVFD--RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
GNAL+ MYAK G + AR + + R N+++ TS++ GY K +VK AR +F K+ +
Sbjct: 313 -GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
R+VV+W A+I GY QNG +AL LFRL+ E P YT +L+ ++L L+ G+Q
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE-TMVERDWVSWNAMIVG 466
H +K +GE S V N+LI MY K G++ R+F+ +++ VSW +MI+
Sbjct: 432 HASAIK------AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G G EA+ LF++ML G KPDH+T +GVL AC+H GLVE+GRKY++ M++ H + P
Sbjct: 486 LAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP 545
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
HY CM+DL GRAG L EA IE+MP++PD + WGSLLA+CK+H+N L + A++L
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERL 605
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
L I+P NSG Y+ L+N+Y+ G+W + RKLM+ RGV K+ G SWI I V+ F V+
Sbjct: 606 LLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVE 665
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
D HP EIY ++ + E+K++G++P+
Sbjct: 666 DVIHPQKDEIYKLMAEIWEEIKKMGFIPDT 695
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 242/497 (48%), Gaps = 73/497 (14%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N S F L D G VH + K VY+ + L+ Y K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG----------------PAS----------- 234
+ A VFD M ++ SWN+LI+ Y + G P S
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 235 ----DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+A+ +F +M++ + P + T+++V+S+CA+ G +IH+ +++ L + + +
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKL-GLGSCVPV 179
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
+L++MYAKCG A+ VFDRM ++N+ + +++S Y ++ + A F KM +R++
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 351 VSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VSWN++I+GY+Q G N EAL +F ++L S+ P ++T ++L+ACANL L +G+Q H
Sbjct: 240 VSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHA 299
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE-----------------------DGC 446
++++ + E+ VGN+LI MY K G VE DG
Sbjct: 300 YILR------AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 447 ----------RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
IF + +RD V+W AMIVG QNG +AL LF+ M+ G +P+ T+
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L S ++E G++ +S K G + ++ + + G ++ AK + +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472
Query: 557 QPDAVIWGSLLAACKVH 573
+ + V W S++ A H
Sbjct: 473 KKEIVSWTSMIMALAQH 489
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 165/305 (54%), Gaps = 7/305 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A +L +C + ++ +++HA I++++ + + N LI +YAK G + AR +
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333
Query: 78 D--KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ + SN N+ + S++ G K G + A +F + +RD +W +M+ G+ Q+ +++A
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L F M +E + Y+ + LS + + G Q+HA K+ SS + +ALI M
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453
Query: 196 YGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
Y K G ++ A+RVFD G +E IVSW S+I Q+G +A+ +F RM++ G++PD
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKE--IVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDH 511
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T V+SAC + ++G + + + ++ L ++D+Y + G L EA +
Sbjct: 512 ITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIE 571
Query: 313 RMPIR 317
MPI
Sbjct: 572 SMPIE 576
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 275/690 (39%), Positives = 410/690 (59%), Gaps = 42/690 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L + +R K R VH +IIK +++ N L+ YAK G L A VFD+M
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+ F+WN++I+G K G + + RL MP+ D SW +++ G+ Q F A+ F K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE S+++ + LS+CA + +G ++H+ + K S V + ++L++MY KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 202 VSCARRVFD-------------------------------GMRERNIVSWNSLITCYEQN 230
A+ VFD M +R+IVSWNS+I+ Y Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 231 GPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL +F +M+ ++PD TLAS++SACA+L G QIHA ++R E + V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 290 LGNALVDMYAKCGKLNEARCVFD--RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
GNAL+ MYAK G + AR + + R N+++ TS++ GY K +VK AR +F K+ +
Sbjct: 313 -GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
R+VV+W A+I GY QNG +AL LFRL+ E P YT +L+ ++L L+ G+Q
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE-TMVERDWVSWNAMIVG 466
H +K +GE S V N+LI MY K G++ R+F+ +++ VSW +MI+
Sbjct: 432 HASAIK------AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMA 485
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G G EA+ LF++ML G KPDH+T +GVL AC+H GLVE+GRKY++ M++ H + P
Sbjct: 486 LAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEP 545
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
HY CM+DL GRAG L EA IE+MP++PD + WGSLLA+CK+H+N L + A++L
Sbjct: 546 TLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERL 605
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
L I+P NSG Y+ L+N+Y+ G+W + RKLM+ RGV K+ G SWI I V+ F V+
Sbjct: 606 LLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVE 665
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
D HP EIY ++ + E+K++G++P+
Sbjct: 666 DVIHPQKDEIYKLMAEIWEEIKKMGFIPDT 695
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 242/497 (48%), Gaps = 73/497 (14%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N S F L D G VH + K VY+ + L+ Y K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG----------------PAS----------- 234
+ A VFD M ++ SWN+LI+ Y + G P S
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 235 ----DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+A+ +F +M++ + P + T+++V+S+CA+ G +IH+ +++ L + + +
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKL-GLGSCVPV 179
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
+L++MYAKCG A+ VFDRM ++N+ + +++S Y ++ + A F KM +R++
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 351 VSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VSWN++I+GY+Q G N EAL +F ++L S+ P ++T ++L+ACANL L +G+Q H
Sbjct: 240 VSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHA 299
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE-----------------------DGC 446
++++ + E+ VGN+LI MY K G VE DG
Sbjct: 300 YILR------AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353
Query: 447 ----------RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
IF + +RD V+W AMIVG QNG +AL LF+ M+ G +P+ T+
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L S ++E G++ +S K G + ++ + + G ++ AK + +
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNG 472
Query: 557 QPDAVIWGSLLAACKVH 573
+ + V W S++ A H
Sbjct: 473 KKEIVSWTSMIMALAQH 489
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 165/305 (54%), Gaps = 7/305 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A +L +C + ++ +++HA I++++ + + N LI +YAK G + AR +
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333
Query: 78 D--KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ + SN N+ + S++ G K G + A +F + +RD +W +M+ G+ Q+ +++A
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L F M +E + Y+ + LS + + G Q+HA K+ SS + +ALI M
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453
Query: 196 YGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
Y K G ++ A+RVFD G +E IVSW S+I Q+G +A+ +F RM++ G++PD
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKE--IVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDH 511
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T V+SAC + ++G + + + ++ L ++D+Y + G L EA +
Sbjct: 512 ITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIE 571
Query: 313 RMPIR 317
MPI
Sbjct: 572 SMPIE 576
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/657 (39%), Positives = 401/657 (61%), Gaps = 13/657 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
D F ++ +C S+ D+R ++HA + K F E IQN ++ +Y KCG + A
Sbjct: 145 DPFSFTSVMKAC---GSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAE 201
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
VF + ++F WNS+I G + A ++F MPERD+ SWN+++S F+QH +
Sbjct: 202 TVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQ 261
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L FV+M ++ F+ + ++GS LSACA + D K G +HA + + +S D+ G+ LID
Sbjct: 262 CLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLID 321
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG + A+RVF +RE + +SWNSLIT G DAL +F +M S + DE
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFI 381
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L +++ C+ G +H ++ + + +GNA++ MYAKCG ++A VF M
Sbjct: 382 LPTILGVCSGPDYASTGELLHGYTIK-SGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P+RN +S T+M++ ++++ + AR F M ERN+V+WN++++ Y QNG +EE L L+
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYV 500
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ V P TF + ACA+LA ++LG Q TH K GL ++ V NS++
Sbjct: 501 SMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSL------NVSVANSIVT 554
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY +CG +++ F+++ ++D +SWNAM+ AQNG G + + F+ ML KP+H++
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ VL CSH GLV EG+ YF SM++ G++P +H++CMVDLLGRAG L++AK LIE M
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P +P+A +W +LL +C+VH ++ L E AKKL+E++ S YVLLSNMY+E G V
Sbjct: 675 PFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVA 734
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+RKLM+ +G+ GCSWIE+ V+VF V + HP KE+YL L+ + + ++ G
Sbjct: 735 DMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTG 791
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 186/620 (30%), Positives = 287/620 (46%), Gaps = 109/620 (17%)
Query: 19 SSPFAKLLDSC-LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S F C KS R++HA++I S S +F+ N L+ +Y+ CG + A +VF
Sbjct: 7 SQKFYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVF 66
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER--DQCSWNSMVSGFAQ---HDRF 132
+ ++N+FTWN++I L+ + DA +LF MP R D SW +M+SG++Q H R
Sbjct: 67 QETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRS 126
Query: 133 SEALGYFVKMHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
E ++ ++ +SF S + AC D ++ Q+HAL+SK + + + ++
Sbjct: 127 FETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNS 186
Query: 192 LIDMYGKCGRVSCAR-------------------------------RVFDGMRERNIVSW 220
++ MY KCG V A ++F+ M ER+ VSW
Sbjct: 187 VVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSW 246
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q+G L +FV M G P+ +T SV+SACAS + K G +HAR++R
Sbjct: 247 NTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILR 306
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
E DLV GN L+DMYAKCG L+ A+ VF KS R
Sbjct: 307 MEH-SLDLVFGNGLIDMYAKCGCLDLAKRVF------------------------KSLR- 340
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
E + +SWN+LI G G E+AL LF ++R SV + +L C+
Sbjct: 341 ------EHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDY 394
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI------------ 448
G H + +K SG S VGN++I MY KCG + +
Sbjct: 395 ASTGELLHGYTIK------SGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISW 448
Query: 449 -------------------FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
F+ M ER+ V+WN+M+ QNG+ E L L+ M G +
Sbjct: 449 TAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PD +T + AC+ +V+ G + + +K GL+ +V + R G + EAK
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKN 567
Query: 550 LIEAMPMQPDAVIWGSLLAA 569
+++ D + W ++LAA
Sbjct: 568 TFDSID-DKDLISWNAMLAA 586
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 178/369 (48%), Gaps = 4/369 (1%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD +L C S +H IKS S + N +I +YAKCG A V
Sbjct: 377 LDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLV 436
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M +N +W ++IT + G I A F MPER+ +WNSM+S + Q+ E L
Sbjct: 437 FRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGL 496
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V M S +F +++ ACA K+G QV +K S +V + ++++ MY
Sbjct: 497 KLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMY 556
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG + A+ FD + +++++SWN+++ + QNG ++ F M+ + +P+ ++
Sbjct: 557 SRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYV 616
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+S C+ + EG + R + + +VD+ + G L +A+ + + MP
Sbjct: 617 SVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPF 676
Query: 317 RNVVSETSMVSGYAKA-SSVKSARLMFTKMLERNV---VSWNALIAGYTQNGENEEALGL 372
+ + S + G + ++ A K++E +V + L Y+++GE + +
Sbjct: 677 KPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADM 736
Query: 373 FRLLKRESV 381
+L+K + +
Sbjct: 737 RKLMKVKGI 745
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/687 (38%), Positives = 402/687 (58%), Gaps = 71/687 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL C + + + + +H+ IIK+ E F+ N LI YAK G + A KVFD+M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ N+++WN+I++ K G + + LF +MP RD SWNS++SG+A +++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 142 M--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + +F L+ +F + L + K+G Q+H + K + S V++GS L+DMY K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 200 GRVSCARRVFDG-------------------------------MRERNIVSWNSLITCYE 228
G +SCAR+VFD MRER+ +SW S+IT +
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
QNG DA+++F M ++ D+ T SV++AC + A +EG Q+HA ++R + ++++
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKDNI 310
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ +ALVDMY KC ++KSA +F KM +
Sbjct: 311 FVASALVDMYCKC-------------------------------KNIKSAEAVFKKMTCK 339
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
NVVSW A++ GY QNG +EEA+ F +++ + P +T G+++++CANLA L+ G Q H
Sbjct: 340 NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
+ GL S I V N+L+ +Y KCGS+ED R+F + +D V+W A++ G A
Sbjct: 400 ARALTSGLI------SFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYA 453
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
Q G E +GLF+ ML G KPD VT IGVL ACS AGLVE+G + F SM EHG+ P++
Sbjct: 454 QFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQ 513
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
DHYTCM+DL RAG ++EA+ I MP PDA+ W +LL++C+ + N+ +G++ A+ L+E
Sbjct: 514 DHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLME 573
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++P N+ YVLLS++YA G+W EV R+RK MR +G+ K+PGCSWI+ V+VF DK
Sbjct: 574 LDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDK 633
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPN 675
+P + +IY L+ L +M + GYVP+
Sbjct: 634 SNPFSDQIYSELEKLNYKMIKEGYVPD 660
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 263/492 (53%), Gaps = 43/492 (8%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ F+ LL + V R++H ++K F S +F+ + L+D+Y+K G + ARKV
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++ KNV +N++I GL++ G ++D+ RLF M ERD SW SM++GF Q+ +A+
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAI 260
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M EN + +Y+FGS L+AC G + + G QVHA + ++ Y ++++ SAL+DMY
Sbjct: 261 DIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY 320
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + A VF M +N+VSW +++ Y QNG + +A++ F M GIEPD+ TL
Sbjct: 321 CKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLG 380
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+S+CA+LA+ +EG Q HAR + L + + + NALV +Y KCG + ++ +F+ +
Sbjct: 381 SVISSCANLASLEEGAQFHARAL-TSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ V+ T++VSGYA Q G+ E +GLF +
Sbjct: 440 KDEVTWTALVSGYA-------------------------------QFGKANETIGLFESM 468
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLIDM 435
+ P TF +L+AC+ ++ G Q ++ +HG+ + + +ID+
Sbjct: 469 LAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYT------CMIDL 522
Query: 436 YMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
+ + G +E+ M D +SW ++ C YG +G + L P H T
Sbjct: 523 FSRAGRIEEARNFINKMPFSPDAISWATLLSSC--RFYGNMDIGKWAAEFLMELDP-HNT 579
Query: 495 MIGVLCACSHAG 506
VL + +A
Sbjct: 580 ASYVLLSSVYAA 591
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/713 (38%), Positives = 410/713 (57%), Gaps = 54/713 (7%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK----CGCLYGAR 74
S +A+LL C + + R +HAR +K+ + ++ N L+ Y + G L AR
Sbjct: 26 SDHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDAR 85
Query: 75 KVFDK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
++FD+ ++ +NVFTWNS+++ K G + DA +FA MPERD SW MV G + RF
Sbjct: 86 RLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRF 145
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA+ + M ++ F ++++ + LS+CA + +G +VH+ + K S V + +++
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205
Query: 193 IDMYGKCG-------------------------------RVSCARRVFDGMRERNIVSWN 221
++MYGKCG R+ A +F+ M +R+IVSWN
Sbjct: 206 LNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWN 265
Query: 222 SLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
++I Y QNG + AL++F RM+ S + PDE T+ SV+SACA+L + G Q+HA ++R
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR 325
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM--PIRNVVSETSMVSGYAKASSVKSA 338
E N V NAL+ YAK G + AR + D+ NV+S T+++ GY K ++SA
Sbjct: 326 TEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESA 384
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R MF M R+VV+W A+I GY QNG N+EA+ LFR + P YT +L+ CA+L
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 444
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DW 457
A L G+Q H ++ L E V N++I MY + GS R+F+ + R +
Sbjct: 445 ACLDYGKQIHCRAIRSLL------EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
++W +MIV AQ+G G EA+GLF++ML G +PD +T +GVL ACSHAG V EG++Y+
Sbjct: 499 ITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 558
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
+ EH +AP HY CMVDLL RAG EA+ I MP++PDA+ WGSLL+AC+VH+N
Sbjct: 559 IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE 618
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L E A+KLL I+P+NSG Y ++N+Y+ GRW + R+ K +++ V K+ G SW I
Sbjct: 619 LAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIR 678
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
++VF D HP +Y + + E+K G+VP+ DDE EE
Sbjct: 679 SKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEE 731
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C +V ++VHA I++++ A + N LI YAK G + AR++
Sbjct: 296 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 355
Query: 78 DKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D+ ++ NV ++ +++ G +K G ++ A +F M RD +W +M+ G+ Q+ R EA
Sbjct: 356 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 415
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + + Y+ + LS CA G Q+H +S + +A+I M
Sbjct: 416 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITM 475
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G ARR+FD + + ++W S+I Q+G +A+ +F M+ +G+EPD +T
Sbjct: 476 YARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRIT 535
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC+ EG + + ++ ++ ++ +VD+ A+ G +EA+ RM
Sbjct: 536 YVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM 595
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEAL 370
P+ + ++ S++S + + A L K+L N +++A+ Y+ G +A
Sbjct: 596 PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAA 655
Query: 371 GLFRLLKRESV 381
+++ K ++V
Sbjct: 656 RIWKARKEKAV 666
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/715 (38%), Positives = 411/715 (57%), Gaps = 55/715 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-----LYG 72
DS A+LL C + + R +HAR +K+ + ++ N L+ YA
Sbjct: 22 DSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFRE 81
Query: 73 ARKVFDKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
AR++FD++ + +NVFTWNS+++ K G + DA +FA MPERD SW MV G +
Sbjct: 82 ARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVG 141
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
RF EA+ F+ M ++ + ++++ + LS+CA + +G +VH+ + K SS V + +
Sbjct: 142 RFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVAN 201
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERN-------------------------------IVS 219
++++MYGKCG AR VF+ M ER+ IVS
Sbjct: 202 SVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVS 261
Query: 220 WNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
WN++I Y QNG + AL F RM++ S + PDE T+ SV+SACA+L G Q+HA +
Sbjct: 262 WNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYI 321
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR--MPIRNVVSETSMVSGYAKASSVK 336
+R ++ + NAL+ MYAK G + AR V + M NV+S T+++ GY K +K
Sbjct: 322 LR-SRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
AR MF M R+VV+W A+I GY QNG N+EA+ LFRL+ R P YT +L+ CA
Sbjct: 381 HAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCA 440
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER- 455
+LA L+ G+Q H ++ S +E V NS++ MY + GS+ R+F+ + R
Sbjct: 441 SLACLEYGKQIHCKAIR------SLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRK 494
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
+ V+W +MIV AQ+G G +A+GLF++ML G KPD +T +GVL AC+H G V+EG++YF
Sbjct: 495 ETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYF 554
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ +HG+ P HY CMVDLL RAG EA+ I+ MP++PDA+ WGSLL+AC+VH+N
Sbjct: 555 QQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKN 614
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
L E A+KLL I+P NSG Y LSN+Y+ GRW + ++ K + + V K+ G SW
Sbjct: 615 ADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTH 674
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
I V+VF D HP +Y + ++K+ G+VP+ DDE EE
Sbjct: 675 IGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEE 729
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/691 (38%), Positives = 409/691 (59%), Gaps = 47/691 (6%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL S ++S+ R +HARIIK +F+ N L+++Y K G A ++FD+M K
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
F+WN+I++ K G +D A R+F +P+ D SW +M+ G+ F A+ F++M
Sbjct: 78 TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
S + ++++F + L++CA + +G +VH+ + K S V + ++L++MY KCG
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV 197
Query: 204 CARRVFDGMR-------------------------------ERNIVSWNSLITCYEQNGP 232
A+ VFD MR + +IVSWNS+IT Y G
Sbjct: 198 MAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGY 257
Query: 233 ASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL--V 289
ALE F M+ +S ++PD+ TL SV+SACA+ + K G QIHA ++R + D+
Sbjct: 258 DIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADV---DIAGA 314
Query: 290 LGNALVDMYAKCGKLNEARCVFD--RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+GNAL+ MYAK G + A + + P NV++ TS++ GY K + AR +F +
Sbjct: 315 VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKH 374
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
R+VV+W A+I GY QNG +AL LFRL+ RE P +YT +L+ ++LA L G+Q
Sbjct: 375 RDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQL 434
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVG 466
H ++ E S + VGN+LI MY + GS++D +IF + RD ++W +MI+
Sbjct: 435 HAVAIR------LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILS 488
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G G EA+ LF+KML KPDH+T +GVL AC+H GLVE+G+ YF+ M H + P
Sbjct: 489 LAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEP 548
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
HY CM+DLLGRAG L+EA I MP++PD V WGSLL++C+VH+ + L + A+KL
Sbjct: 549 TSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKL 608
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
L I+P+NSG Y+ L+N + G+W + +VRK M+ + V K+ G SW++I V++F V+
Sbjct: 609 LLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVE 668
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D HP IY ++ + +E+K++G++P+ +
Sbjct: 669 DALHPQRDAIYCMISKIWKEIKKMGFIPDTN 699
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 267/549 (48%), Gaps = 87/549 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L SC ++++ ++VH+ ++K + + + N L+++YAKCG A+ VFD+M
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+ TWN++I+ +++ D A LF M + D SWNS+++G+ AL F
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 142 M-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + +++ GS LSACA K+G Q+HA + ++ +G+ALI MY K G
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 201 RVSCARR---------------------------------VFDGMRERNIVSWNSLITCY 227
V A R +FD ++ R++V+W ++I Y
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
QNG SDAL +F M+ G +P+ TLA+V+S +SLA+ G Q+HA +R E++ +
Sbjct: 388 AQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV-SS 446
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+ +GNAL+ MY++ G + +AR +F+ + R+ ++ TSM+ A
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLA---------------- 490
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
Q+G EA+ LF + R ++ P H T+ +L+AC ++ ++ G+
Sbjct: 491 ---------------QHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK- 534
Query: 407 AHTHVVK--HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
++ +++K H + S + +ID+ + G +E+ M +E D V+W ++
Sbjct: 535 SYFNLMKNVHNIEPTSSHYA------CMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSL 588
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPD--HVTMIGVLCACSHAGLVEEGRKYFSSM--- 518
+ C + Y A +K+LL ++ + L AC G E+ K SM
Sbjct: 589 LSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSAC---GKWEDAAKVRKSMKDK 645
Query: 519 --SKEHGLA 525
KE G +
Sbjct: 646 AVKKEQGFS 654
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 183/371 (49%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C +S+ +++HA I+++ + N LI +YAK G + A ++
Sbjct: 277 DKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIV 336
Query: 78 DKMSNK--NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ NV + S++ G K G ID A +F S+ RD +W +M+ G+AQ+ S+A
Sbjct: 337 EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDA 396
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L F M E + Y+ + LS + G Q+HA+ + S V +G+ALI M
Sbjct: 397 LVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITM 456
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G + AR++F+ + R+ ++W S+I Q+G ++A+E+F +M+ ++PD +T
Sbjct: 457 YSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHIT 516
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC + ++G + + ++D+ + G L EA M
Sbjct: 517 YVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNM 576
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
PI +VV+ S++S V A++ K+L N ++ AL + G+ E+A
Sbjct: 577 PIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAA 636
Query: 371 GLFRLLKRESV 381
+ + +K ++V
Sbjct: 637 KVRKSMKDKAV 647
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 42/212 (19%)
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+LL + D +GR H ++KHGLR+L +F+ N+L+++Y+K GS D R+F
Sbjct: 17 HLLQSAIKSRDPFIGRCIHARIIKHGLRYLG-----VFLTNNLLNLYVKTGSSSDAHRLF 71
Query: 450 ETM-------------------------------VERDWVSWNAMIVGCAQNGYGTEALG 478
+ M + D VSW MIVG G A+
Sbjct: 72 DEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVH 131
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK--EHGLAPLKDHYTCMVD 536
F +M+ G P T VL +C+ A ++ G+K S + K + G+ P+ + +++
Sbjct: 132 AFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN---SLLN 188
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ + G AK + + M ++ D W ++++
Sbjct: 189 MYAKCGDSVMAKVVFDRMRLK-DTSTWNTMIS 219
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 278/710 (39%), Positives = 408/710 (57%), Gaps = 54/710 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG----CLYGARKVF 77
FA+LL + + S R +HA +K+ ++ N L+ YA+ G C + AR++F
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 78 DKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D + + +N FTWNS+++ K G + DA +FA MPERD SW MV G + RF +A
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F+ M E A S++ + LS+CA + +G +VH+ + K SS V + ++++ M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207
Query: 196 YGKCGRVSCARRVFDGMR-------------------------------ERNIVSWNSLI 224
YGKCG AR VF+ M+ ER+IVSWN++I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267
Query: 225 TCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
Y QNG AL+ F RM+ AS +EPDE T+ SV+SACA+L K G Q+H+ ++R
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGM 327
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMVSGYAKASSVKSARLM 341
+ ++ NAL+ YAK G + AR + D+ + NV+S T+++ GY K K AR +
Sbjct: 328 PYSSQIM-NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREV 386
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F M R+V++W A+I GY QNG+N+EA+ LFR + R P +T +L+ACA+LA L
Sbjct: 387 FDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYL 446
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSW 460
G+Q H ++ S +E + V N++I +Y + GSV R+F+ + R + V+W
Sbjct: 447 GYGKQIHCRAIR------SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTW 500
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
+MIV AQ+G G +A+ LF++ML G KPD VT IGV AC+HAG +++G++Y+ M
Sbjct: 501 TSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLN 560
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
EHG+ P HY CMVDLL RAG L EA I+ MP+ PD V+WGSLLAAC+V +N L E
Sbjct: 561 EHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAE 620
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A+KLL I+P NSG Y L+N+Y+ GRW + R+ KL + + V K+ G SW + V
Sbjct: 621 LAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKV 680
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
+VF D HP I + E+K+ G+VP+ + DDE EE
Sbjct: 681 HVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEE 730
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 181/371 (48%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + + +++H+ I+++ I N LI YAK G + AR++
Sbjct: 295 DEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIM 354
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
DK +++ NV ++ +++ G +K G A +F M RD +W +M+ G+ Q+ + EA
Sbjct: 355 DKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEA 414
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + ++ + LSACA G Q+H +S V + +A+I +
Sbjct: 415 MELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITV 474
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G V ARRVFD + + V+W S+I Q+G A+ +F M+ G++PD VT
Sbjct: 475 YARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVT 534
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V SAC +G + + +++ + ++ +VD+ A+ G L EA RM
Sbjct: 535 YIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRM 594
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEAL 370
P+ + V S+++ + A L K+L N +++AL Y+ G +A
Sbjct: 595 PVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAA 654
Query: 371 GLFRLLKRESV 381
+++L K ++V
Sbjct: 655 RIWKLRKDKAV 665
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/713 (38%), Positives = 409/713 (57%), Gaps = 54/713 (7%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK----CGCLYGAR 74
S +A+LL C + + R +HAR +K+ + ++ N L+ Y + G L AR
Sbjct: 26 SDHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDAR 85
Query: 75 KVFDK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
++FD+ ++ +NVFTWNS+++ K G + DA +FA MPERD SW MV G + RF
Sbjct: 86 RLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRF 145
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA+ + M ++ F ++++ + LS+CA + +G +VH+ + K S V + +++
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSV 205
Query: 193 IDMYGKC-------------------------------GRVSCARRVFDGMRERNIVSWN 221
++MYGKC GR+ A +F+ M R+IVSWN
Sbjct: 206 LNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWN 265
Query: 222 SLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
++I Y QNG + AL++F RM+ S + PDE T+ SV+SACA+L + G Q+HA ++R
Sbjct: 266 AMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR 325
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM--PIRNVVSETSMVSGYAKASSVKSA 338
E N V NAL+ YAK G + AR + D+ NV+S T+++ GY K ++SA
Sbjct: 326 TEMAYNSQVT-NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESA 384
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R MF M R+VV+W A+I GY QNG N+EA+ LFR + P YT +L+ CA+L
Sbjct: 385 REMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASL 444
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DW 457
A L G+Q H ++ L E V N++I MY + GS R+F+ + R +
Sbjct: 445 ACLDYGKQIHCRAIRSLL------ERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKET 498
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
++W +MIV AQ+G G EA+GLF++ML G +PD +T +GVL ACSHAG V EG++Y+
Sbjct: 499 ITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 558
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
+ EH +AP HY CMVDLL RAG EA+ I MP++PDA+ WGSLL+AC+VH+N
Sbjct: 559 IKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE 618
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L E A+KLL I+P+NSG Y ++N+Y+ GRW + R+ K +++ V K+ G SW I
Sbjct: 619 LAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIR 678
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
++VF D HP +Y + + E+K G+VP+ DDE EE
Sbjct: 679 SKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEE 731
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C +V ++VHA I++++ A + N LI YAK G + AR++
Sbjct: 296 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 355
Query: 78 DKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D+ ++ NV ++ +++ G +K G ++ A +F M RD +W +M+ G+ Q+ R EA
Sbjct: 356 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 415
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + + Y+ + LS CA G Q+H +S + +A+I M
Sbjct: 416 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITM 475
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G ARR+FD + + ++W S+I Q+G +A+ +F M+ +G+EPD +T
Sbjct: 476 YARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRIT 535
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC+ EG + + ++ ++ ++ +VD+ A+ G +EA+ RM
Sbjct: 536 YVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM 595
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEAL 370
P+ + ++ S++S + + A L K+L N +++A+ Y+ G +A
Sbjct: 596 PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAA 655
Query: 371 GLFRLLKRESV 381
+++ K ++V
Sbjct: 656 RIWKARKEKAV 666
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 277/710 (39%), Positives = 408/710 (57%), Gaps = 54/710 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG----CLYGARKVF 77
+A+LL C + + S R +HA +K+ ++ N L+ YA G C AR +F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 78 DKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D + + +N FTWNS+++ K G + DA +FA MP+RD SW M+ G + RF +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F+ M SE FA S+++ + LS+CA +G +VH + K SS V + ++++ M
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 196 YGKCGRVSCARRVFDGMR-------------------------------ERNIVSWNSLI 224
YGKCG AR VF+ M+ ER+IVSWN++I
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451
Query: 225 TCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
Y QNG AL+ F RM+ AS +EPD T+ SV+SACA+L K G Q+H+ ++R
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGM 511
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMVSGYAKASSVKSARLM 341
+ ++ NAL+ YAK G + AR + D+ + NV+S T+++ GY K K AR +
Sbjct: 512 PCSSQIM-NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F M R+V++W A+I GY QNG+N+EA+ LFR + P +T +L+ACA+LA L
Sbjct: 571 FDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYL 630
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSW 460
G+Q H ++ S +E + V N++I +Y + GSV R+F+ + R + ++W
Sbjct: 631 DYGKQIHCKAIR------SLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
+MIV AQ+G G +A+ LF++M+ G KPDH+T +GVL AC+HAG V++G++Y+ M
Sbjct: 685 TSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQN 744
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
EHG+ P HY CMVDL RAG L EA I+ MP+ PD V+WGSLLAAC+V +N L E
Sbjct: 745 EHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAE 804
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A KLL I+P NSG Y L+N+Y+ GRW + R+ KL + +GV K+ G SW + G V
Sbjct: 805 LAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKV 864
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
+VF D HP IY + E+K+ G+VP+ + DDE EE
Sbjct: 865 HVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEE 914
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 182/371 (49%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +L +C + + +++H+ I+++ I N LI YAK G + AR++
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D+ +++ NV ++ +++ G +K G A +F M RD +W +M+ G+ Q+ + EA
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + ++ + LSACA G Q+H +S V + +A+I +
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITV 658
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G V ARRVFD + + ++W S+I Q+G A+ +F M+ G++PD +T
Sbjct: 659 YARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHIT 718
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SACA +G + + ++ + + +VD++A+ G L EA RM
Sbjct: 719 YVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRM 778
Query: 315 PI-RNVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEAL 370
P+ + V S+++ + A L K+L N +++AL Y+ G +A
Sbjct: 779 PVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAA 838
Query: 371 GLFRLLKRESV 381
+++L K + V
Sbjct: 839 RIWKLRKDKGV 849
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/660 (38%), Positives = 383/660 (58%), Gaps = 69/660 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C + R+VH II F S++ + L +Y KCG L AR+VF
Sbjct: 119 DKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVF 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ MP+RD SWN++++G++Q+ + EAL
Sbjct: 179 DR-------------------------------MPKRDVVSWNAIIAGYSQNGQPYEALA 207
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S + CA + + G Q+H +S SDV + + L++MY
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V+ A ++F+ M R++ SWN++I Y N +AL F RM GI+P+ +T+ S
Sbjct: 268 KCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVS 327
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA L A ++G QIH +R ND V+GNALV+MYAKCG +N A +F+RMP +
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESND-VVGNALVNMYAKCGNVNSAYKLFERMPKK 386
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NVV+ +++SG Y+Q+G EAL LF ++
Sbjct: 387 NVVAWNAIISG-------------------------------YSQHGHPHEALALFIEMQ 415
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P + ++L ACA+ L+ G+Q H + ++ SG ES++ VG L+D+Y
Sbjct: 416 AQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR------SGFESNVVVGTGLVDIYA 469
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+V ++FE M E+D VSW MI+ +G+G +AL LF KM G K DH+
Sbjct: 470 KCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTA 529
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACSHAGLV++G +YF M ++GLAP +HY C+VDLLGRAG LDEA +I+ M ++
Sbjct: 530 ILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLE 589
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA +WG+LL AC++H NI LGE AK L E++P N+G YVLLSN+YAE RW +V ++R
Sbjct: 590 PDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLR 649
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K+M+++GV KQPGCS + + V F+V D+ HP +++IY +L++L +M++ GYVPN +
Sbjct: 650 KMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTN 709
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 40/358 (11%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N V W I Y +NG + AL ++ +M +GI PD++ SV+ AC S + + G ++H
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++ +D+++G AL MY KCG L AR VFDRMP R+VVS ++++G
Sbjct: 144 EDII-ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG------- 195
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
Y+QNG+ EAL LF ++ + P T +++ C
Sbjct: 196 ------------------------YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVC 231
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+L L+ G+Q H + ++ SG ESD+ V N L++MY KCG+V ++FE M R
Sbjct: 232 AHLLALEQGKQIHCYAIR------SGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR 285
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D SWNA+I G + N EAL F +M + G KP+ +TM+ VL AC+H +E+G++
Sbjct: 286 DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQ-I 344
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ G +V++ + G ++ A L E MP + + V W ++++ H
Sbjct: 345 HGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQH 401
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 135/254 (53%), Gaps = 16/254 (6%)
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRL 375
RN V T VS A + FT+ + N V W I GY +NG +AL L+
Sbjct: 58 RNKVKTTREVSACANQTQ-------FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQ 110
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++R + P F +++ AC + +DLQ GR+ H ++ G ESD+ VG +L M
Sbjct: 111 MQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF------ESDVIVGTALASM 164
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+E+ ++F+ M +RD VSWNA+I G +QNG EAL LF +M + G KP+ T+
Sbjct: 165 YTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTL 224
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ V+ C+H +E+G++ + G+ +V++ + G ++ A L E MP
Sbjct: 225 VSVMPVCAHLLALEQGKQ-IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP 283
Query: 556 MQPDAVIWGSLLAA 569
++ D W +++
Sbjct: 284 IR-DVASWNAIIGG 296
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/689 (38%), Positives = 400/689 (58%), Gaps = 76/689 (11%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+ + +LL C DT+++H IIK+ EIF+ N L+ YAK + AR+VFD
Sbjct: 15 SNHYCELLKHC------RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFD 68
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL-G 137
+M +N+++WN++++ K + + R+F +MP RD SWNS++S +A +++
Sbjct: 69 QMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKA 128
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
Y + +++ F L+ + + L + +G QVH + K + S V++GS L+DMY
Sbjct: 129 YNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYS 188
Query: 198 KCGRVSCARRVFDGMRERNIV-------------------------------SWNSLITC 226
K G V CAR+ FD M E+N+V SW ++I
Sbjct: 189 KTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG 248
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+ QNG +A+++F M +E D+ T SV++AC + A +EG Q+HA ++R + ++
Sbjct: 249 FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YQD 307
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ +G+ALVDMY KC S+KSA +F KM
Sbjct: 308 NIFVGSALVDMYCKC-------------------------------KSIKSAETVFRKMN 336
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+NVVSW A++ GY QNG +EEA+ +F ++ + P +T G+++++CANLA L+ G Q
Sbjct: 337 CKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQ 396
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H + +SG S I V N+L+ +Y KCGS+ED R+F M D VSW A++ G
Sbjct: 397 FHCRAL------VSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSG 450
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ G E L LF+ ML G KPD VT IGVL ACS AGLV++G + F SM KEH + P
Sbjct: 451 YAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIP 510
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
++DHYTCM+DL RAG L+EA+ I MP PDA+ W SLL++C+ HRN+ +G++ A+ L
Sbjct: 511 IEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESL 570
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
L++EP N+ Y+LLS++YA G+W EV +RK MR +G+ K+PGCSWI+ V++F
Sbjct: 571 LKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSAD 630
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
D+ +P + +IY L+ L +M + GYVP+
Sbjct: 631 DQSNPFSDQIYSELEKLNYKMVQEGYVPD 659
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 172/360 (47%), Gaps = 35/360 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ + ++VHA II++ + IF+ + L+D+Y KC + A V
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F KM+ KNV +W +++ G + Q+ EA+
Sbjct: 332 FRKMNCKNVVSWTAMLVG-------------------------------YGQNGYSEEAV 360
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M + +++ GS +S+CA + G Q H S S + + +AL+ +Y
Sbjct: 361 KIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLY 420
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + + R+F M + VSW +L++ Y Q G A++ L +F M+A G +PD+VT
Sbjct: 421 GKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFI 480
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+SAC+ ++G QI +++ ++ ++D++++ G+L EAR ++MP
Sbjct: 481 GVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPF 540
Query: 317 R-NVVSETSMVSG---YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ + S++S + K A K+ N S+ L + Y G+ EE L
Sbjct: 541 SPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANL 600
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/699 (37%), Positives = 408/699 (58%), Gaps = 50/699 (7%)
Query: 22 FAKLLDSC--LRSKSVSDT------RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ LL+ C L KSV+ + + VH R+IKS +++ N L++VY+K G A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHA 68
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
RK+FD+M + F+WN++++ K G +D + F +P+RD SW +M+ G+ ++
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYH 128
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A+ +M E S+++ + L++ A + + G +VH+ + K +V + ++L+
Sbjct: 129 KAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 194 DMYGKCGRVSCARRVFD-------------------------------GMRERNIVSWNS 222
+MY KCG A+ VFD M ER+IV+WNS
Sbjct: 189 NMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 223 LITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+I+ Y Q G AL++F +M+ S + PD TLASV+SACA+L G QIH+ ++
Sbjct: 249 MISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTT 308
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE--TSMVSGYAKASSVKSAR 339
+ +VL NAL+ MY++CG + AR + ++ +++ E T+++ GY K + A+
Sbjct: 309 GFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAK 367
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +R+VV+W A+I GY Q+G EA+ LFR + E P YT +L+ ++LA
Sbjct: 368 NIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLA 427
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV 458
L G+Q H VK SGE + V N+LI MY K GS+ R F+ + ERD V
Sbjct: 428 SLGHGKQIHGSAVK------SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTV 481
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW +MI+ AQ+G+ EAL LF+ ML+ G +PDH+T +GV AC+HAGLV +GR+YF M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ P HY CMVDL GRAG L EA+ IE MP++PD V WGSLL+AC+V++NI L
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDL 601
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ A++LL +EP NSG Y L+N+Y+ G+W E ++RK M+ V K+ G SWIE+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+ F V+D HP EIY+ +K + E+K++GYVP+ +
Sbjct: 662 KVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTA 700
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 189/367 (51%), Gaps = 7/367 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C + + ++H+ I+ + F + N LI +Y++CG + AR++
Sbjct: 278 DRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 78 DKMSNKN--VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ K+ + + +++ G +K G +++A +F S+ +RD +W +M+ G+ QH + EA
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEA 397
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M E + Y+ + LS + G Q+H KS V + +ALI M
Sbjct: 398 INLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ A R FD +R ER+ VSW S+I Q+G A +ALE+F M+ G+ PD +T
Sbjct: 458 YAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V SAC +G Q + +K+ L +VD++ + G L EA+ ++M
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
PI +VV+ S++S ++ ++ ++L N +++AL Y+ G+ EEA
Sbjct: 578 PIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 371 GLFRLLK 377
+ + +K
Sbjct: 638 KIRKSMK 644
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 34/221 (15%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ +VG+ +S A +L S+ +++H +KS + + N LI +YAK
Sbjct: 402 RSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 68 GCLYGARKVFDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G + A + FD + ++ +W S+I L
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIAL------------------------------- 490
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSD 185
AQH EAL F M E ++ SAC + G Q ++ +
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+ + ++D++G+ G + A+ + M E ++V+W SL++
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS 591
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/687 (39%), Positives = 395/687 (57%), Gaps = 47/687 (6%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR S+ R VH II F I NRLIDVY K L AR++FD++S +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIART 84
Query: 90 SIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
++++G G I A +F P RD +N+M++GF+ ++ A+ F KM E F
Sbjct: 85 TMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 148 ALSEYSFGSALSACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----V 202
++++ S L+ A VD K Q HA KS + +AL+ +Y +C +
Sbjct: 145 KPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLL 204
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNG------------------------------- 231
AR+VFD + E++ SW +++T Y +NG
Sbjct: 205 HSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNC 264
Query: 232 -PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+ALE+ RM++SGIE DE T SV+ ACA+ + G Q+HA ++R E
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF--SFHF 322
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N+LV +Y KCGK NEAR +F++MP +++VS +++SGY + + A+L+F +M E+N+
Sbjct: 323 DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SW +I+G +NG EE L LF +KRE P Y F + +CA L G+Q H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQ 442
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
+VK G +S + GN+LI MY KCG VE+ ++F TM D VSWNA+I Q+
Sbjct: 443 LVKIGF------DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQH 496
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G+G EA+ ++++ML G +PD +T + VL ACSHAGLV++GRKYF+SM + + P DH
Sbjct: 497 GHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADH 556
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
Y ++DLL R+G EA+++IE++P +P A IW +LL+ C+VH N+ LG A KL +
Sbjct: 557 YARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
P + G Y+LLSNMYA G+W EV RVRKLMR RGV K+ CSWIE+ V+ F+V D H
Sbjct: 617 PEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNAS 677
P + +Y L+ L +EM+R+GYVP+ S
Sbjct: 677 PEAEAVYKYLQDLGKEMRRLGYVPDTS 703
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + SC + + ++ HA+++K F S + N LI +YAKCG + A++VF M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP 479
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALG 137
+ +WN++I L + G +A ++ M ++ D+ ++ ++++ + +
Sbjct: 480 CLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539
Query: 138 YFVKMHS 144
YF M +
Sbjct: 540 YFNSMET 546
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/681 (38%), Positives = 392/681 (57%), Gaps = 70/681 (10%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
C +++ + +++H IIKS E F+ N LI+ Y+K G + AR VFDKM N F+W
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-F 147
N++++ K G + +F+ MP RD SWNS++SG+ + EA+ + M +
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
L+ +F + L + +G Q+H + K + + V++GS+L+DMY K G VS A +
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 208 VFD-------------------------------GMRERNIVSWNSLITCYEQNGPASDA 236
VFD GM+ER+ +SW ++IT QNG ++A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++F M G+ D+ T SV++AC L A KEG +IH ++R +++ +G+ALVD
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIR-SGYNHNVFVGSALVD 313
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY KC SV+ A +F +M +NVVSW A+
Sbjct: 314 MYCKC-------------------------------RSVRYAEAVFKRMANKNVVSWTAM 342
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
+ GY QNG +EEA+ +F ++R + P +T G+++++CANLA L+ G Q H +
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQAL---- 398
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+SG S I V N+LI +Y KCGS+ED ++F+ M RD VSW A++ G AQ G E
Sbjct: 399 --VSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANET 456
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ LF++ML+ G KPD VT I VL ACS AGLVE G++YF SM K+HG+ P DHYTCM+D
Sbjct: 457 IDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMID 516
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
L GRAG L+EAK I MP PD++ W +LL++C+++ N +G++ A+ LLE++P N
Sbjct: 517 LFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAG 576
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
Y+LLS++YA G+W V ++R+ MR++G K+PG SWI+ V +F D+ P + +I
Sbjct: 577 YILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQI 636
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
Y L+ L +M GYVP+AS
Sbjct: 637 YAELEKLNHKMIEEGYVPDAS 657
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 31/300 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C +++ + + +H II+S + +F+ + L+D+Y KC + A V
Sbjct: 268 MDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+NKNV +W +++ G + GF ++A R+F M +G D
Sbjct: 328 FKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQR----------NGIEPDD------ 371
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
++ GS +S+CA + G Q H S S + + +ALI +Y
Sbjct: 372 ---------------FTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + + ++FD M R+ VSW +L++ Y Q G A++ +++F RM+ G++PD VT
Sbjct: 417 GKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFI 476
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+SAC+ + G Q +++ + ++D++ + G+L EA+ ++MP
Sbjct: 477 AVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPF 536
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 384/640 (60%), Gaps = 8/640 (1%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++H K F + IQN +ID+Y KC +Y A +VF ++ ++F+WN +I G K
Sbjct: 13 HQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYGYSKL 72
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+ A F MPERD SWN+++S F+ H ++LG FV+M + + ++ S L
Sbjct: 73 HEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVL 132
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SACA DF+ G +HA + + DV +G+ L+DMY KCG + ++RVF+ +RE N+V
Sbjct: 133 SACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVV 192
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+W SLI+ G + ++F +M + D LA+++ C G Q+H
Sbjct: 193 TWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFT 252
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + + + +GNA + MYAKCG +A F+ M +V+S T+M++ ++ + +V+ A
Sbjct: 253 VK-TGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERA 311
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R F +M ERNV+SWNA++ Y QN EE L L+ L+ R+ V P TF ++ AC+ L
Sbjct: 312 RDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSEL 371
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A +LG Q + VK GL SD+ V NS I +Y +CG +E+ +F+++ E++ +
Sbjct: 372 AISKLGTQILSQAVKVGLG------SDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLI 425
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN+++ G AQNG G + + +F+ ML+ G KPDH+T I +L CSH+GLV+E + +F+SM
Sbjct: 426 SWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSM 485
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+K+ G++ +H+ CMVDL GRAG L A +I+ MP +P+A IWG+LL+AC++H + +
Sbjct: 486 TKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEM 545
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E K LLE+ N Y+LL+N Y+ GR V VR++M+++ V K PGCSWIE+
Sbjct: 546 AELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCN 605
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNAS 677
V+VF D HP K+IY L+ + +++K GY +S
Sbjct: 606 RVHVFTANDTSHPQVKDIYKALEDIVKKIKDDYGYFDRSS 645
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 209/472 (44%), Gaps = 102/472 (21%)
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV----------- 208
AC+ ++ Q+H L K + ++ + +++IDMY KC + A +V
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 209 --------------------FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
F M ER+ VSWN++I+ + +G +L FV M G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+P+ +T ASV+SACA++ F+ G +HAR++R E D+++GN LVDMYAKCG ++ ++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFL-DVLVGNGLVDMYAKCGLIDASK 180
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF+ + NVV+ TS++SG A G EE
Sbjct: 181 RVFNTLREHNVVTWTSLISGIA-------------------------------HFGSQEE 209
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+F ++++ V ++ +L C ++ +G Q H VK G+ S + V
Sbjct: 210 VYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMN------SSVPV 263
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMV-------------------------------ERDW 457
GN+ + MY KCG E FETM ER+
Sbjct: 264 GNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNV 323
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
+SWNAM+ QN + E L L+ ML +PD +T + ++ ACS + + G + S
Sbjct: 324 ISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQ 383
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
K GL + L R G ++EA+ L +++ + + + W S++
Sbjct: 384 AVKV-GLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ-EKNLISWNSIMGG 433
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 176/350 (50%), Gaps = 1/350 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ D +D+ A +L C ++S ++H +K+ S + + N + +YAKCG
Sbjct: 216 QMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCG 275
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
A F+ M+ +V +W ++IT G ++ A F MPER+ SWN+M+ + Q
Sbjct: 276 DFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQ 335
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ + E L ++ M + +F + + AC+ K+GTQ+ + K SDV +
Sbjct: 336 NSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSV 395
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
++ I +Y +CGR+ A+ +FD ++E+N++SWNS++ Y QNG +E+F M+ +G
Sbjct: 396 VNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGC 455
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+PD +T +++S C+ KE + + + L +VD++ + G L A
Sbjct: 456 KPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLAL 515
Query: 309 CVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
+ D+MP + N +++S + A L +LE N ++ + I
Sbjct: 516 DMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYI 565
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 201/408 (49%), Gaps = 70/408 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +A +L +C + +HARI++ + ++ + N L+D+YAKCG + +++VF
Sbjct: 124 NSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVF 183
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + NV TW S+I+G+ +G ++ +F M R C
Sbjct: 184 NTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQM--RKDC-------------------- 221
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
V M +NF L+ + L C G + +G Q+H K+ +S V +G+A + MY
Sbjct: 222 --VIM--DNFILA-----TILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYA 272
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
KC G V AR F+ M ERN++SWN+++
Sbjct: 273 KCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGA 332
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y QN + L++++ M+ + PD +T +++ AC+ LA K G QI ++ ++ L +
Sbjct: 333 YCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKV-GLGS 391
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ + N+ + +Y++CG++ EA+ +FD + +N++S S++ GYA+ +F ML
Sbjct: 392 DVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNML 451
Query: 347 ----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRE---SVCPTHYT 387
+ + +++ A+++G + +G +EA F + ++ SV H+
Sbjct: 452 MAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFV 499
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 262/668 (39%), Positives = 383/668 (57%), Gaps = 73/668 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S FA + SC ++ ++H +K+ F +++ I +D+Y KC L
Sbjct: 273 VSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL------ 326
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DA +LF S+P + S+N+++ G+A+ D+ EAL
Sbjct: 327 -------------------------SDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEAL 361
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
G F + L E S A ACA G QVH L KS S++ + +A++DMY
Sbjct: 362 GMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMY 421
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A VF+ M R+ VSWN++I +EQNG L +FV M+ SG+EPDE T
Sbjct: 422 GKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYG 481
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ ACA A G++IH R+++ +L D +G AL+DMY+KCG + +A + DR+
Sbjct: 482 SVLKACAGWQALNCGMEIHNRIIK-SRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA- 539
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
E+ VVSWNA+I+G++ ++EEA F +
Sbjct: 540 ------------------------------EQTVVSWNAIISGFSLQKQSEEAQKTFSKM 569
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
V P ++T+ +L+ CANL ++LG+Q H ++K L +SD ++ ++L+DMY
Sbjct: 570 LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL------QSDAYISSTLVDMY 623
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D IFE RD+V+WNAM+ G AQ+G G EAL +F+ M L KP+H T +
Sbjct: 624 SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFL 683
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC H GLVE+G YF SM +GL P +HY+C+VD++GR+G + +A LIE MP
Sbjct: 684 AVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 743
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ DAVIW +LL+ CK+H N+ + E A +L++EP +S YVLLSN+YA G W EV ++
Sbjct: 744 EADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKL 803
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RK+MR G+ K+PGCSWIEI V+ F+V DK HP +KEIY L +LT EMK VGY+P+
Sbjct: 804 RKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDT 863
Query: 677 ----SDDE 680
+DDE
Sbjct: 864 DFILNDDE 871
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 292/575 (50%), Gaps = 44/575 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C K++ ++ HAR+I ++F +F+ N LI +Y KC L A KVFD M
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ +WN+++ G G I A +LF +MPERD SWNS++SG+ + + + F++
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +F L +C+ D G Q+H L K + DV GSAL+DMY KC +
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ C+ + F M E+N VSW+++I QN LE+F M +G+ + T ASV +
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L+A + G Q+H ++ + D+V+G A +DMY KC L++A+ +F+ +P N+ S
Sbjct: 285 CAGLSALRLGSQLHGHALKTD-FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++ GYA++ + EALG+FRLL++ +
Sbjct: 344 YNAIIVGYARSD-------------------------------KGIEALGMFRLLQKSGL 372
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ ACA + G Q HGL S +S+I V N+++DMY KCG+
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQV------HGLSMKSLCQSNICVANAILDMYGKCGA 426
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ + C +FE MV RD VSWNA+I QNG + L LF ML G +PD T VL A
Sbjct: 427 LVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKA 486
Query: 502 CSHAGLVEEGRKYFSSMSKEH-GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
C+ + G + + + K GL ++D+ + G +++A+ L + + Q
Sbjct: 487 CAGWQALNCGMEIHNRIIKSRLGLDSFVG--IALIDMYSKCGMMEKAEKLHDRLAEQT-V 543
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSN 593
V W ++++ + + + K+LE ++P N
Sbjct: 544 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 280/582 (48%), Gaps = 78/582 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D + FA +L SC + ++H +K F ++ + L+D+YAKC L + +
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M KN +W++II G + Q+D L
Sbjct: 232 FHSMPEKNWVSWSAIIAGCV-------------------------------QNDDLRGGL 260
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +S+ +F S +CAG ++G+Q+H K+ + +DV +G+A +DMY
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC +S A+++F+ + N+ S+N++I Y ++ +AL +F + SG+ DEV+L+
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 380
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
ACA + EGLQ+H M+ ++++ + NA++DMY KCG L EA VF+
Sbjct: 381 GAFRACAVIKGDLEGLQVHGLSMK-SLCQSNICVANAILDMYGKCGALVEACLVFE---- 435
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+M+ R+ VSWNA+IA + QNG E+ L LF +
Sbjct: 436 ---------------------------EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWM 468
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P +T+G++L ACA L G + H ++K L D FVG +LIDMY
Sbjct: 469 LQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL------DSFVGIALIDMY 522
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +E ++ + + E+ VSWNA+I G + EA F KML G PD+ T
Sbjct: 523 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 582
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAM 554
+L C++ VE G++ + + K+ + D Y + +VD+ + G + + + + E
Sbjct: 583 TILDTCANLVTVELGKQIHAQIIKKELQS---DAYISSTLVDMYSKCGNMQDFQLIFEKA 639
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
P + D V W +++ H LGE K ++ N P
Sbjct: 640 PNR-DFVTWNAMVCGYAQHG---LGEEALKIFEYMQLENVKP 677
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 217/460 (47%), Gaps = 83/460 (18%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ G Q HA + + + V++ + LI MY KC + A +VFDGM
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 213 RER-------------------------------NIVSWNSLITCYEQNGPASDALEVFV 241
+R ++VSWNSLI+ Y NG ++VF+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M G D T A V+ +C+SL G+QIH ++ D+V G+AL+DMYAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM-GFDCDVVTGSALLDMYAKC 222
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
KL+ + F MP +N VS W+A+IAG
Sbjct: 223 KKLDCSIQFFHSMPEKNWVS-------------------------------WSAIIAGCV 251
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QN + L LF+ +++ V + TF ++ +CA L+ L+LG Q H H +K
Sbjct: 252 QNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG---- 307
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D+ +G + +DMYMKC ++ D ++F ++ + S+NA+IVG A++ G EALG+F+
Sbjct: 308 --TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFR 365
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA--PLKDHYTC----MV 535
+ G D V++ G AC+ EG + HGL+ L C ++
Sbjct: 366 LLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV-------HGLSMKSLCQSNICVANAIL 418
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
D+ G+ G L EA + E M + DAV W +++AA + + N
Sbjct: 419 DMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGN 457
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/691 (38%), Positives = 395/691 (57%), Gaps = 70/691 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+ +A LL C S++ + +++H I+K+ E F+ N LI Y K G L A VFD
Sbjct: 5 SNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFD 64
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG- 137
+ N+F+WN+I++ K G + ++F MP RD SWN +SG+A + S+A+
Sbjct: 65 HIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRV 124
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
Y + + L+ +F + L C+ +G Q++ + K + SDV++GS L+DMY
Sbjct: 125 YKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYT 184
Query: 198 KCGRVSCARRVFDGMRERNIV-------------------------------SWNSLITC 226
K G + A+R FD M ERN+V SW +IT
Sbjct: 185 KLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
QNG +AL++F M +G D+ T SV++AC SL A EG QIHA ++R + ++
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH-KD 303
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ +G+ALVDMY+ K S+KSA +F +M
Sbjct: 304 NVFVGSALVDMYS-------------------------------KCRSIKSAETVFKRMP 332
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
++NV+SW A++ GY QNG +EEA+ +F ++R V P +T G+++++CANLA L+ G Q
Sbjct: 333 QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H + +SG S I V N+LI +Y KCGS E+ R+F M RD VSW A++ G
Sbjct: 393 FHCRAL------VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAG 446
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ G E +GLF++ML G KPD VT IGVL ACS AGLVE+G +YF SM KEHG+ P
Sbjct: 447 YAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMP 506
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+ DH TC++DLLGRAG L+EA+ I MP PD V W +LL++C+VH ++ +G++ A L
Sbjct: 507 IVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSL 566
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
+ +EP N YVLLS++YA G+W +V ++R+ MR + V K+PG SWI+ G V+VF
Sbjct: 567 IALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSAD 626
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D+ P +IY L+ L +M GYVP+ S
Sbjct: 627 DQSSPFLGQIYAELEKLNYKMIEEGYVPDMS 657
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 255/470 (54%), Gaps = 41/470 (8%)
Query: 5 RSVKQIVGDLAF-LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
R K ++ D A L+ F+ +L C + + V R+++ +I+K F S++F+ + L+D+
Sbjct: 123 RVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDM 182
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y K G +Y A++ FD+M +NV N++ITGL++ G I+++ RLF + ERD SW M+
Sbjct: 183 YTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMI 242
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
+G Q+ EAL F +M FA+ +++FGS L+AC + G Q+HA + ++ +
Sbjct: 243 TGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHK 302
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+V++GSAL+DMY KC + A VF M ++N++SW +++ Y QNG + +A+++F M
Sbjct: 303 DNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEM 362
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+G+EPD+ TL SV+S+CA+LA+ +EG Q H R + L + + + NAL+ +Y KCG
Sbjct: 363 QRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRAL-VSGLISFITVSNALITLYGKCGS 421
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ +F M IR+ VS T++++GYA Q
Sbjct: 422 TENSHRLFTEMNIRDEVSWTALLAGYA-------------------------------QF 450
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGE 422
G+ E +GLF + + P TF +L+AC+ ++ G Q ++K HG+ +
Sbjct: 451 GKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDH 510
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ I ID+ + G +E+ M D V W ++ C +G
Sbjct: 511 CTCI------IDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/700 (39%), Positives = 397/700 (56%), Gaps = 53/700 (7%)
Query: 23 AKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A+L C + S S R VHA +I S F +I NRLIDVY K L A +FD++
Sbjct: 18 AQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIR 77
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYF 139
++ ++I G + A +F + P RD +N+M++G++ ++ A+ F
Sbjct: 78 QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137
Query: 140 VKMHSENFALSEYSFGSALSACAGSV-DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ F ++F S L A A V D K Q+H + KS + +AL+ ++ K
Sbjct: 138 RDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVK 197
Query: 199 C----------------------------------------GRVSCARRVFDGMRERNIV 218
C G + AR+ DGM E+ +V
Sbjct: 198 CASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVV 257
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WN++I+ Y +G +ALE+F +M GI+ DE T SV+SACA+ F G Q+HA +
Sbjct: 258 AWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYI 317
Query: 279 MRCEK---LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+R E L L + NAL +Y KCGK++EAR VF++MP++++VS +++SGY A +
Sbjct: 318 LRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRI 377
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
A+ F +M ERN+++W +I+G QNG EE+L LF +K E P Y F + AC
Sbjct: 378 DEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIAC 437
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA L GRQ H +V+ G +S + GN+LI MY KCG VE +F TM
Sbjct: 438 AWLAALMHGRQLHAQLVRLGF------DSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL 491
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSWNAMI Q+G+G +AL LF+ ML PD +T + VL CSHAGLVEEG +YF
Sbjct: 492 DSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYF 551
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
SMS +G+ P +DHY M+DLL RAG EAK +IE MP++P IW +LLA C++H N
Sbjct: 552 KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ LG A++L E+ P + G YVLLSNMYA +GRW +V +VRKLMR +GV K+PGCSWIE
Sbjct: 612 MDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIE 671
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ V+VF+V D HP + +Y L+ L +M+++GY+P+
Sbjct: 672 VENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPD 711
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA + +C ++ R++HA++++ F S + N LI +YAKCG + A +F M
Sbjct: 430 FAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+ +WN++I L + G A LF M + D
Sbjct: 490 YLDSVSWNAMIAALGQHGHGAQALELFELMLKED 523
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/691 (38%), Positives = 396/691 (57%), Gaps = 65/691 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC----LYG 72
D + FA +L SC + ++H +K F ++ + L+D+YAKC L G
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRG 215
Query: 73 ARKVFDKMSN------------------KNVFTWNSIITGLLKWGFIDDAS-RLFASMPE 113
++F +M +V + + +K + D S +LF S+P
Sbjct: 216 GLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN 275
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+ S+N+++ G+A+ D+ EALG F + L E S A ACA G QV
Sbjct: 276 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV 335
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H L KS S++ + +A++DMYGKCG + A VF+ M R+ VSWN++I +EQNG
Sbjct: 336 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 395
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
L +FV M+ SG+EPDE T SV+ ACA A G++IH R+++ ++ D +G A
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK-SRMGLDSFVGIA 454
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+DMY+KCG + +A + DR+ E+ VVSW
Sbjct: 455 LIDMYSKCGMMEKAEKLHDRLA-------------------------------EQTVVSW 483
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
NA+I+G++ ++EEA F + V P ++T+ +L+ CANL ++LG+Q H ++K
Sbjct: 484 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK 543
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
L +SD ++ ++L+DMY KCG+++D IFE RD+V+WNAM+ G AQ+G G
Sbjct: 544 KEL------QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLG 597
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EAL +F+ M L KP+H T + VL AC H GLVE+G YF SM +GL P +HY+C
Sbjct: 598 EEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSC 657
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
+VD++GR+G + +A LIE MP + DAVIW +LL+ CK+H N+ + E A +L++EP +
Sbjct: 658 VVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPED 717
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
S YVLLSN+YA G W EV ++RK+MR G+ K+PGCSWIEI V+ F+V DK HP +
Sbjct: 718 SAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRS 777
Query: 654 KEIYLVLKMLTREMKRVGYVPNA----SDDE 680
KEIY L +LT EMK VGY+P+ +DDE
Sbjct: 778 KEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 295/619 (47%), Gaps = 93/619 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C K++ ++ HAR+I ++F +F+ N LI +Y KC L A KVFD M
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMP 104
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER-------------------DQCSWNSM 122
++ +WN+++ G G I A +LF +MP D+ ++ +
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVV 164
Query: 123 V---SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL-----SACAGSVDFKMG---- 170
+ S H + G VKM + ++ GSAL C + D + G
Sbjct: 165 LKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT----GSALLDMYAKCCVQNDDLRGGLELF 220
Query: 171 ----------TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS-CARRVFDGMRERNIVS 219
Q+H K+ + +DV +G+A +DMY KC +S C+ ++F+ + N+ S
Sbjct: 221 KEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQS 280
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+N++I Y ++ +AL +F + SG+ DEV+L+ ACA + EGLQ+H M
Sbjct: 281 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSM 340
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ ++++ + NA++DMY KCG L EA VF+
Sbjct: 341 K-SLCQSNICVANAILDMYGKCGALVEACLVFE--------------------------- 372
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+M+ R+ VSWNA+IA + QNG E+ L LF + + + P +T+G++L ACA
Sbjct: 373 ----EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 428
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L G + H ++K + D FVG +LIDMY KCG +E ++ + + E+ VS
Sbjct: 429 ALNCGMEIHNRIIKSRMGL------DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVS 482
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNA+I G + EA F KML G PD+ T +L C++ VE G++ + +
Sbjct: 483 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 542
Query: 520 KEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
K+ + D Y + +VD+ + G + + + + E P + D V W +++ H
Sbjct: 543 KKELQS---DAYISSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG--- 595
Query: 578 LGEYVAKKLLEIEPSNSGP 596
LGE K ++ N P
Sbjct: 596 LGEEALKIFEYMQLENVKP 614
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 248/544 (45%), Gaps = 55/544 (10%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ G Q HA + + + V++ + LI MY KC + A +VFDGM
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVF---------------VRMMASGIEPDEVTLAS 257
+R+ VSWN+++ Y G A ++F RM G D T A
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE----ARCVFDR 313
V+ +C+SL G+QIH ++ D+V G+AL+DMYAKC N+ +F
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKM-GFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKE 222
Query: 314 MPI------------------RNVVSETSMVSGYAKASSVKS-ARLMFTKMLERNVVSWN 354
M +VV T+ + Y K +++ + +F + N+ S+N
Sbjct: 223 MQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYN 282
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I GY ++ + EALG+FRLL++ + + ACA + G Q H
Sbjct: 283 AIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV------H 336
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
GL S +S+I V N+++DMY KCG++ + C +FE MV RD VSWNA+I QNG
Sbjct: 337 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEE 396
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH-GLAPLKDHYTC 533
+ L LF ML G +PD T VL AC+ + G + + + K GL
Sbjct: 397 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVG--IA 454
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEP 591
++D+ + G +++A+ L + + Q V W ++++ + + + K+LE ++P
Sbjct: 455 LIDMYSKCGMMEKAEKLHDRLAEQT-VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513
Query: 592 SNSGPYVLLSN----MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
N +L + ELG+ ++K ++ + G++ F +
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 573
Query: 648 KRHP 651
++ P
Sbjct: 574 EKAP 577
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/687 (38%), Positives = 395/687 (57%), Gaps = 47/687 (6%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR S+ R VH II F I NRLIDVY K L AR++FD++S +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 90 SIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
++++G G I A +F P RD +N+M++GF+ ++ A+ F KM E F
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 148 ALSEYSFGSALSACA-GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----V 202
++F S L+ A + D K Q HA KS + +AL+ +Y KC +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGP------------------------------ 232
AR+VFD + E++ SW +++T Y +NG
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 233 --ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+ALE+ RM++SGIE DE T SV+ ACA+ + G Q+HA ++R E
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHF 322
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N+LV +Y KCGK +EAR +F++MP +++VS +++SGY + + A+L+F +M E+N+
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SW +I+G +NG EE L LF +KRE P Y F + +CA L G+Q H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++K G +S + GN+LI MY KCG VE+ ++F TM D VSWNA+I Q+
Sbjct: 443 LLKIGF------DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G+G EA+ ++++ML G +PD +T++ VL ACSHAGLV++GRKYF SM + + P DH
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
Y ++DLL R+G +A+++IE++P +P A IW +LL+ C+VH N+ LG A KL +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
P + G Y+LLSNM+A G+W EV RVRKLMR RGV K+ CSWIE+ V+ F+V D H
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNAS 677
P + +Y+ L+ L +EM+R+GYVP+ S
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + SC + + ++ HA+++K F S + N LI +YAKCG + AR+VF M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
+ +WN++I L + G +A ++ M ++
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/667 (36%), Positives = 394/667 (59%), Gaps = 42/667 (6%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
++K +++ N L+++YAK G A +F++M K F+WN+I++G K G ++ A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
++F +P RD SW +++ G+ Q RF +A+ FV M + ++++ + L++CA +
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR----------- 213
+G +VH+ + K + V + ++L++MY K G + A+ VFD M+
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 214 --------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDE 252
ER+IVSWNS+I Q+G ++AL+ F ++ + ++PD
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+LAS +SACA+L G QIH ++R +GNAL+ MYAK G + AR + +
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRT-MFDASGAVGNALISMYAKSGGVEIARRIIE 299
Query: 313 RMPIRN--VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
+ I + V++ T++++GY K + AR +F + + +VV+W A+I GY QNG N +A+
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAI 359
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F+ + E P +T +L+A +++ L G+Q H ++ SGE VGN
Sbjct: 360 EVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR------SGEALSPSVGN 413
Query: 431 SLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+L MY K GS+ ++F + + RD VSW +MI+ AQ+G G EA+ LF++ML G K
Sbjct: 414 ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIK 473
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PDH+T +GVL AC+H GLVE+GR YF M H + P HY CMVDL GRAG L EA
Sbjct: 474 PDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYK 533
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
+E MPM+PD + WGSLL++CKV++N+ L + A++LL IEP+NSG Y L+N+Y+ G+
Sbjct: 534 FVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGK 593
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W + ++RKLM+ RGV K+ G SW++I +VF V+D HP EIY ++ + +E+K+
Sbjct: 594 WDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKK 653
Query: 670 VGYVPNA 676
+G+ P+
Sbjct: 654 MGFAPDT 660
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 238/499 (47%), Gaps = 83/499 (16%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
+V D +L SC + S ++VH+ ++K + + + N L+++YAK G
Sbjct: 98 MVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGD 157
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L A+ VFD+M +N +WN++I+ + G +D A F + ERD SWNSM++G QH
Sbjct: 158 LKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQH 217
Query: 130 DRFSEALGYFVK-MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+EAL +F + + +S SALSACA G Q+H + ++ + + +
Sbjct: 218 GFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAV 277
Query: 189 GSALIDMYGKCGRVSCARR---------------------------------VFDGMRER 215
G+ALI MY K G V ARR +F+ +++
Sbjct: 278 GNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDP 337
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++V+W ++I Y QNG +DA+EVF M++ G P+ TLA+++SA +S+ + G QIH
Sbjct: 338 DVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIH 397
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASS 334
A +R + + V GNAL MYAK G +N AR VF+ + R+ VS TSM+ A
Sbjct: 398 ASAIRSGEALSPSV-GNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALA---- 452
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
Q+G EEA+ LF + + P H T+ +L+A
Sbjct: 453 ---------------------------QHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 395 CANLADLQLGRQ-----AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
C + ++ GR + H + L + ++D++ + G +++ +
Sbjct: 486 CTHGGLVEQGRSYFDLMKNVHKIDPTLSHYA----------CMVDLFGRAGLLQEAYKFV 535
Query: 450 ETM-VERDWVSWNAMIVGC 467
E M +E D ++W +++ C
Sbjct: 536 ENMPMEPDVIAWGSLLSSC 554
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 197/371 (53%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L +C + +S +++H I+++ F + + N LI +YAK G + AR++
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ +S+ +V + +++ G +K G I A ++F S+ + D +W +M+ G+ Q+ ++A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M SE + ++ + LSA + G Q+HA +S + +G+AL M
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418
Query: 196 YGKCGRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ AR+VF+ +R+ R+ VSW S+I Q+G +A+E+F +M+ GI+PD +T
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC ++G + K+ L +VD++ + G L EA + M
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
P+ +V++ S++S +V A++ ++L N +++AL Y+ G+ ++A
Sbjct: 539 PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAA 598
Query: 371 GLFRLLKRESV 381
+ +L+K V
Sbjct: 599 KIRKLMKARGV 609
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 48/267 (17%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K +V + +S A +L + S++ +++HA I+S A + N L +YAK
Sbjct: 363 KTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKA 422
Query: 68 GCLYGARKVFDKM-SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G + GARKVF+ + N++ +W S+I L
Sbjct: 423 GSINGARKVFNLLRQNRDTVSWTSMIMAL------------------------------- 451
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
AQH EA+ F +M + ++ LSAC + G L+ K+ + D
Sbjct: 452 AQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLM-KNVHKIDP 510
Query: 187 YMG--SALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT---CYEQNGPASDALEVF 240
+ + ++D++G+ G + A + + M E ++++W SL++ Y+ A A E
Sbjct: 511 TLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAE-- 568
Query: 241 VRMMASGIEPDE----VTLASVVSACA 263
R++ IEP+ LA+V S+C
Sbjct: 569 -RLLL--IEPNNSGAYSALANVYSSCG 592
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/629 (40%), Positives = 375/629 (59%), Gaps = 52/629 (8%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCGCLYGARKVF 77
SS + LL CL +KS+ D + +HA +I++QF +I + N+L+ +Y K G L AR
Sbjct: 64 SSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEAR--- 120
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
R+F MP ++ SW +M++ +A+H+ EALG
Sbjct: 121 ----------------------------RVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M + ++F S L AC D ++ + H + K + S+V++G+ L+DMY
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYA 209
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + AR +FD M +R++VSWN++I Y QNG DAL++F E+
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLF----------QEIPKRD 259
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V++ +A + + + + EK+ +LV N ++ Y + G + EA +F MP
Sbjct: 260 VITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPE 319
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RNV+S +++SG+A+ V+ A +F M E NVVSWNA+IAGY+QNG+ E AL LF +
Sbjct: 320 RNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQM 379
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P TF +L ACA LA L+ G +AH V++ SG +SD+ VGN+L+ MY
Sbjct: 380 QMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIR------SGFQSDVLVGNTLVGMY 433
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+ED ++F+ M ++D S +AMIVG A NG E+L LF++M G KPD VT +
Sbjct: 434 AKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFV 493
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC HAGLV+EGR+YF M++ + + P +HY CM+DLLGRAGC DEA LI MP+
Sbjct: 494 GVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPI 553
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PDA +WGSLL+AC+ H NI LGE VA+ L+ + P N PYVLLSN+YA GRW ++ V
Sbjct: 554 KPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSV 613
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
R M+ R V K+ GCSWI I V+ F+V
Sbjct: 614 RNRMKDRKVKKKLGCSWIVIKKQVHAFLV 642
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 50/349 (14%)
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ L+ + G +AL + M+ +GI P T S++ C + + + +HA +++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ D+ LGN LV +Y K G L EAR VFD MP++NVVS T+M++ YA+
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYAR--------- 143
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+ +EALG F ++ + P H+TF ++L AC D
Sbjct: 144 ----------------------HEHGQEALGFFYEMQDVGIQPNHFTFASILPAC---TD 178
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L++ + H +VK G ES++FVGN L+DMY K G +E +F+ M +RD VSW
Sbjct: 179 LEVLGEFHDEIVKGGF------ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSW 232
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NAMI G QNG +AL LF+++ K D +T ++ + G VE + F M +
Sbjct: 233 NAMIAGYVQNGLIEDALKLFQEI----PKRDVITWNTMMAGYAQCGDVENAVELFEKMPE 288
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++ ++ + M+ + G + EA L + MP + + + W ++++
Sbjct: 289 QNLVS-----WNTMIAGYVQNGSVKEAFKLFQIMP-ERNVISWNAVISG 331
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 128/326 (39%), Gaps = 92/326 (28%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++ G + +D P FA +L +C + H +I+S F S++ + N L+ +Y
Sbjct: 374 KLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMY 433
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AKCG + ARKVFD+M ++D S ++M+
Sbjct: 434 AKCGSIEDARKVFDRMR-------------------------------QQDSASLSAMIV 462
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRY 182
G+A + E+L F +M +F LSAC AG VD G Q ++++ +
Sbjct: 463 GYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVD--EGRQYFDIMTRFYH 520
Query: 183 -SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
+ + +ID+ G+ G C+++ A+D +
Sbjct: 521 ITPAMEHYGCMIDLLGRAG-------------------------CFDE---ANDLIN--- 549
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA-------- 293
I+PD S++SAC + H + EK+ L+ N
Sbjct: 550 ---KMPIKPDADMWGSLLSAC----------RTHNNIDLGEKVAQHLIALNPQNPAPYVL 596
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNV 319
L ++YA G+ ++ V +RM R V
Sbjct: 597 LSNIYAAAGRWDDIGSVRNRMKDRKV 622
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/693 (37%), Positives = 401/693 (57%), Gaps = 73/693 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVF 77
SS +A LL + R++ +H I+++ ++ N L+ Y K G AR+VF
Sbjct: 6 SSQYAALLSAAARTEP-HVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M + N+FT+N++++ L + D LFASM +RD S+N++++GF+ ++A+
Sbjct: 65 DAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVR 124
Query: 138 YFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
++ + + ++ S + + + A + D +G Q H + + + ++ ++GS L+DM
Sbjct: 125 VYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDM 184
Query: 196 YGK-------------------------------CGRVSCARRVFDGMRERNIVSWNSLI 224
Y K C V ARR+F+ M +R+ ++W +++
Sbjct: 185 YAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
T + QNG S+ALE+F RM GI D+ T S+++AC +L+A ++G QIHA ++R +
Sbjct: 245 TGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRT-RY 303
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+++ +G+ALVDMY+KC S+K A +F +
Sbjct: 304 DDNVFVGSALVDMYSKC-------------------------------RSIKLAETVFRR 332
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M +N++SW ALI GY QNG +EEA+ +F ++R+ + P YT G+++++CANLA L+ G
Sbjct: 333 MTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEG 392
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
Q H L +SG I V N+L+ +Y KCGS+ED R+F+ M D VSW A++
Sbjct: 393 AQFHC------LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 446
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQ G E + LF+KML G KPD VT IGVL ACS AG VE+GR YF SM K+HG+
Sbjct: 447 SGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
P+ DHYTCM+DL R+G L EA+ I+ MPM PDA+ WG+LL+AC++ ++ +G++ A+
Sbjct: 507 VPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAE 566
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
LLEI+P N YVLL +M+A G+W EV ++R+ MR R V K+PGCSWI+ V++F
Sbjct: 567 NLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 626
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D+ HP +K IY L+ L +M GY P+ S
Sbjct: 627 ADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVS 659
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 180/369 (48%), Gaps = 35/369 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ +++HA II++++ +F+ + L+D+Y+KC + A V
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+ KN+ +W ++I G + G ++A R+F+ M +RD +
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEM-QRDGIDPD---------------- 372
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+Y+ GS +S+CA + G Q H L S + + +AL+ +Y
Sbjct: 373 --------------DYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLY 418
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L++ Y Q G A + +++F +M+A G++PD VT
Sbjct: 419 GKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFI 478
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+SAC+ ++G + + + ++D+Y++ GKL EA +MP+
Sbjct: 479 GVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPM 538
Query: 317 R-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGL 372
+ + +++S ++ + +LE +N S+ L + + G+ E L
Sbjct: 539 HPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQL 598
Query: 373 FRLLKRESV 381
R ++ V
Sbjct: 599 RRGMRDRQV 607
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/693 (37%), Positives = 393/693 (56%), Gaps = 74/693 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+ + L C +++ + +++H RII++ E F+ N LI+ Y K G L AR VFD
Sbjct: 5 SNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFD 64
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ N+F+WN++++ K G++ D R+F SMP D SWNS++SG+A + SE++
Sbjct: 65 HIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRV 124
Query: 139 F---VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ +K S N +S LS+ G VD +G Q+H + K Y S +++GS L+DM
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVD--LGRQIHGQIFKFGYQSYLFVGSPLVDM 182
Query: 196 YGKCGRVSCARRVFDGMRERNIV-------------------------------SWNSLI 224
Y K G ++ A R+F+ + E+NIV SW ++I
Sbjct: 183 YAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTII 242
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
T QNG +A++ F M G D+ T SV++AC A EG QIHA ++R +
Sbjct: 243 TGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD-Y 301
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
++++ +G+AL+DMY KC RNV K A +F K
Sbjct: 302 QDNIFVGSALLDMYCKC---------------RNV----------------KYAEAVFRK 330
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M +NV+SW A++ GY QNG +EEA+ +F ++R + P +T G+++++CANLA L+ G
Sbjct: 331 MRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG 390
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
Q H + GL + V N+LI +Y KCGS+E ++F M RD VSW A++
Sbjct: 391 AQFHGQALASGLICF------VTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALV 444
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQ G E + LF+ ML G PD VT +GVL ACS AGLVE+G YF M KEH +
Sbjct: 445 SGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRI 504
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
P+ DHYTCM+DLL RAG L+EAK I MP PDA+ W +LL++C+++ N+ +G++ A+
Sbjct: 505 TPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAE 564
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
L ++EP N Y+LLS++YA G+W +V ++RK MR+ GV K+PG SWI+ V++F
Sbjct: 565 SLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFS 624
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D+ P + +IY L+ L +M GYVP+ S
Sbjct: 625 ADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMS 657
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 31/300 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ + +++HA II++ + IF+ + L+D+Y KC + A V
Sbjct: 268 MDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F KM +KNV +W +++ G + G+ ++A R+F M +R++
Sbjct: 328 FRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDM-QRNE-------------------- 366
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+H ++F L GS +S+CA + G Q H S V + +ALI +Y
Sbjct: 367 -----IHPDDFTL-----GSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A ++F M+ R+ VSW +L++ Y Q G A++ + +F M+A GI PD VT
Sbjct: 417 GKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFV 476
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+SAC+ ++G +++ ++ ++D+ ++ G+L EA+ ++MP
Sbjct: 477 GVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPF 536
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/699 (37%), Positives = 406/699 (58%), Gaps = 50/699 (7%)
Query: 22 FAKLLDSC--LRSKSVSDT------RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ LL+ C L KSV+ + + VH R+IKS +++ N L++VY+K G A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
RK+FD+M + F+WN++++ K G +D F +P+RD SW +M+ G+ ++
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A+ M E ++++ + L++ A + + G +VH+ + K +V + ++L+
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 194 DMYGKCGRVSCARRVFD-------------------------------GMRERNIVSWNS 222
+MY KCG A+ VFD M ER+IV+WNS
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 223 LITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+I+ + Q G AL++F +M+ S + PD TLASV+SACA+L G QIH+ ++
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE--TSMVSGYAKASSVKSAR 339
+ +VL NAL+ MY++CG + AR + ++ +++ E T+++ GY K + A+
Sbjct: 309 GFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +R+VV+W A+I GY Q+G EA+ LFR + P YT +L+ ++LA
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV 458
L G+Q H VK SGE + V N+LI MY K G++ R F+ + ERD V
Sbjct: 428 SLSHGKQIHGSAVK------SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW +MI+ AQ+G+ EAL LF+ ML+ G +PDH+T +GV AC+HAGLV +GR+YF M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ P HY CMVDL GRAG L EA+ IE MP++PD V WGSLL+AC+VH+NI L
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ A++LL +EP NSG Y L+N+Y+ G+W E ++RK M+ V K+ G SWIE+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+VF V+D HP EIY+ +K + E+K++GYVP+ +
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 7/367 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C + + +++H+ I+ + F + N LI +Y++CG + AR++
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 78 DKMSNKN--VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ K+ + + +++ G +K G ++ A +F S+ +RD +W +M+ G+ QH + EA
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + Y+ + LS + G Q+H KS V + +ALI M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ A R FD +R ER+ VSW S+I Q+G A +ALE+F M+ G+ PD +T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V SAC +G Q + +K+ L +VD++ + G L EA+ ++M
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
PI +VV+ S++S ++ ++ ++L N +++AL Y+ G+ EEA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 371 GLFRLLK 377
+ + +K
Sbjct: 638 KIRKSMK 644
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/634 (39%), Positives = 377/634 (59%), Gaps = 8/634 (1%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
+ K F + + ++D++ +CG + A K F ++ VF NS++ G K +D A
Sbjct: 188 LTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHA 247
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
LF SMPERD SWN MVS +Q R EAL V MH+ L ++ S+L+ACA
Sbjct: 248 LELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKL 307
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
G Q+HA + +S D Y+ SA++++Y KCG ARRVF +R+RN VSW LI
Sbjct: 308 SSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLI 367
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Q G S++LE+F +M A + D+ LA+++S C++ Q+H+ ++
Sbjct: 368 GGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHT 427
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
R +V+ N+L+ MYAKCG L A +F M R++VS T M++ Y++ ++ AR F
Sbjct: 428 RA-VVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDG 486
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQL 403
M RNV++WNA++ Y Q+G E+ L ++ +L + V P T+ L CA++ +L
Sbjct: 487 MSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKL 546
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G Q H VK GL D V N++I MY KCG + + +IF+ + +D VSWNAM
Sbjct: 547 GDQITGHTVKVGLIL------DTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAM 600
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G +Q+G G +A+ +F ML G KPD+++ + VL +CSH+GLV+EG+ YF + ++H
Sbjct: 601 ITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHN 660
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
++P +H++CMVDLL RAG L EAK LI+ MPM+P A +WG+LL+ACK H N L E A
Sbjct: 661 VSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAA 720
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
K L +++ +SG Y+LL+ +YA+ G+ + +VRKLMR +G+ K PG SW+E+ V+VF
Sbjct: 721 KHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVF 780
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+D HP I L L ++ ++GYV S
Sbjct: 781 KAEDVSHPQVIAIREKLDELMEKIAQLGYVRTES 814
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 257/541 (47%), Gaps = 75/541 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF- 77
+ A L SC +++ R +H R++ AS +F+QN L+ Y CG L AR +
Sbjct: 28 TQALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLR 87
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q RF +A+
Sbjct: 88 GDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAME 147
Query: 138 YFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV M +L + ++FG A+ +C ++ Q+ LL+K + D + + ++DM+
Sbjct: 148 SFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMF 207
Query: 197 GKCGRVSCARR-------------------------------VFDGMRERNIVSWNSLIT 225
+CG V A + +F+ M ER++VSWN +++
Sbjct: 208 VRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVS 267
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G A +AL V V M G+ D T S ++ACA L++ G Q+HA+++R
Sbjct: 268 ALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCI 327
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ V +A+V++YAKCG EAR VF + RN V
Sbjct: 328 DPYV-ASAMVELYAKCGCFKEARRVFSSLRDRNTV------------------------- 361
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
SW LI G+ Q G E+L LF ++ E + + +++ C+N D+ L R
Sbjct: 362 ------SWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLAR 415
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ L SG + + NSLI MY KCG++++ IF +M ERD VSW M+
Sbjct: 416 QLHS------LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLT 469
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + +T +L A G E+G K +S+M E +
Sbjct: 470 AYSQVGNIGKAREFFDGM----STRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVI 525
Query: 526 P 526
P
Sbjct: 526 P 526
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 215/422 (50%), Gaps = 69/422 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C + S+ +++HA++I+S + ++ + ++++YAKCGC AR+V
Sbjct: 292 LDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRV 351
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + ++N +W +I G L++G C FSE+L
Sbjct: 352 FSSLRDRNTVSWTVLIGGFLQYG-----------------C--------------FSESL 380
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + +++ + +S C+ +D + Q+H+L KS ++ V + ++LI MY
Sbjct: 381 ELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMY 440
Query: 197 GKC-------------------------------GRVSCARRVFDGMRERNIVSWNSLIT 225
KC G + AR FDGM RN+++WN+++
Sbjct: 441 AKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLG 500
Query: 226 CYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G D L+++ M+ + PD VT ++ CA + A K G QI ++ +
Sbjct: 501 AYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLI 560
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ V+ NA++ MY+KCG+++EAR +FD + +++VS +M++GY++ K A +F
Sbjct: 561 LDTSVM-NAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 619
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHYTFGNLLNACANLA 399
ML++ + +S+ A+++ + +G +E F +LKR+ +V P F +++ A
Sbjct: 620 MLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAG 679
Query: 400 DL 401
+L
Sbjct: 680 NL 681
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 161/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L +D A ++ C + R++H+ +KS + I N LI +YAKCG
Sbjct: 385 QMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCG 444
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A +F M +++ +W ++T + G I A F M R+ +WN+M+ + Q
Sbjct: 445 NLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQ 504
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M +E + ++ ++ + CA K+G Q+ K D
Sbjct: 505 HGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTS 564
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A+I MY KCGR+S AR++FD + +++VSWN++IT Y Q+G A+E+F M+ G
Sbjct: 565 VMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG 624
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S+C+ +EG L R + L + +VD+ A+ G L EA
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684
Query: 308 RCVFDRMPIR 317
+ + D MP++
Sbjct: 685 KNLIDEMPMK 694
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/743 (36%), Positives = 400/743 (53%), Gaps = 114/743 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS + KLL SC+++K ++ ++VH I++ ++I N L+ +YA CG + AR++
Sbjct: 26 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL 85
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK SNK+V SWN M+SG+A EA
Sbjct: 86 FDKFSNKSVV-------------------------------SWNVMISGYAHRGLAQEAF 114
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M E +++F S LSAC+ G ++H + ++ ++D +G+ALI MY
Sbjct: 115 NLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMY 174
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG V ARRVFD M R+ VSW +L Y ++G ++L+ + M+ + P +T
Sbjct: 175 AKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYM 234
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG-------------- 302
+V+SAC SLAA ++G QIHA ++ E +D+ + AL MY KCG
Sbjct: 235 NVLSACGSLAALEKGKQIHAHIVESE-YHSDVRVSTALTKMYMKCGAFKDAREVFECLSY 293
Query: 303 -----------------KLNEARCVFDRM------PIR---------------------- 317
+L EA F RM P R
Sbjct: 294 RDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEI 353
Query: 318 -------NVVSET----SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
+VS+ ++++ Y+KA S+K AR +F +M +R+VVSW L+ Y +
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQV 413
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
E+ F+ + ++ V T+ +L AC+N L+ G++ H VVK GL +D+
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLL------ADL 467
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V N+L+ MY KCGSVED R+FE M RD V+WN +I G QNG G EAL ++ M
Sbjct: 468 AVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSE 527
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G +P+ T + VL AC LVEEGR+ F+ MSK++G+ P + HY CMVD+L RAG L E
Sbjct: 528 GMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLRE 587
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A+ +I +P++P A +WG+LLAAC++H N+ +GE A+ L++EP N+G YV LS +YA
Sbjct: 588 AEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAA 647
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
G W +V ++RK M++RGV K+PG SWIEI G V+ F+ +D+ HP +EIY L+ L ++
Sbjct: 648 AGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQ 707
Query: 667 MKRVGYVPNAS------DDEAYE 683
MK +GYVP+ DDE E
Sbjct: 708 MKSLGYVPDTRFVMHDLDDEGKE 730
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 224/426 (52%), Gaps = 40/426 (9%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+H + + Y + L +C + D +G QVH + + +VY+ + L+ +Y CG
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V+ AR++FD +++VSWN +I+ Y G A +A +F M +EPD+ T S++SA
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSA 138
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+S A G +IH R+M L ND +GNAL+ MYAKCG + +AR VFD M R+ VS
Sbjct: 139 CSSPAVLNWGREIHVRVMEA-GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS 197
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T++ YA ++G EE+L + + +E V
Sbjct: 198 WTTLTGAYA-------------------------------ESGYGEESLKTYHAMLQERV 226
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P+ T+ N+L+AC +LA L+ G+Q H H+V+ S SD+ V +L MYMKCG+
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVE------SEYHSDVRVSTALTKMYMKCGA 280
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+D +FE + RD ++WN MI G +G EA G F +ML G PD T VL A
Sbjct: 281 FKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSA 340
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ G + G++ + +K+ GL ++++ +AG + +A+ + + MP + D V
Sbjct: 341 CARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVV 398
Query: 562 IWGSLL 567
W +LL
Sbjct: 399 SWTTLL 404
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+ + L R+ Y + LL +C DL +G+Q H H+++ G++ ++++ N+
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK------PNVYITNT 68
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+ +Y CGSV + ++F+ + VSWN MI G A G EA LF M +PD
Sbjct: 69 LLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
T + +L ACS ++ GR+ + E GLA ++ + + G + +A+ +
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRV-MEAGLANDTTVGNALISMYAKCGSVRDARRVF 187
Query: 552 EAMPMQPDAVIWGSLLAA 569
+AM + D V W +L A
Sbjct: 188 DAMASR-DEVSWTTLTGA 204
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/690 (37%), Positives = 391/690 (56%), Gaps = 58/690 (8%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R VHA I+ S F FI NRLI++Y K + ARK+FDK+ ++ ++++
Sbjct: 25 RAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSS 84
Query: 99 GFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
G + A +LF + P RD S+N+M++ ++ + AL FV+M F ++F S
Sbjct: 85 GNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSS 144
Query: 157 ALSACAGSVD------------FKMGTQV-----HALLS-------KSRYSSDVYMGSA- 191
LSA + D K+GT + +ALLS S M SA
Sbjct: 145 VLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASAR 204
Query: 192 ------------------LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+I Y + + AR + DG+ V+WN++I+ Y + G
Sbjct: 205 KVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLY 264
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACAS----LAAFKEGLQIHARLMRC---EKLRN 286
+A + F RM + GI+ DE T S++SAC S + F G Q+H ++R
Sbjct: 265 EEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHF 324
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
L + NAL+ Y K ++ EAR VFD+MP+R+++S +++SGY A ++ A +F++M
Sbjct: 325 VLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMP 384
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ERNV++W +I+G QNG EE L LF +K E + P Y F + AC+ L L G+Q
Sbjct: 385 ERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQ 444
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H+ V++ G +S + GN+LI MY +CG VE +F TM D VSWNAMI
Sbjct: 445 IHSQVIR------LGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAA 498
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G+G +A+ LF++M+ PD +T + +L AC+HAGL++EGR YF +M +G+ P
Sbjct: 499 LAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITP 558
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+DHY ++DLL RAG +A+++I++MP + A IW +LLA C++H N+ LG A +L
Sbjct: 559 GEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
LE+ P G Y++LSNMYA LG+W EV RVR LMR+RGV K+PGCSW+E+ V+VF+V
Sbjct: 619 LELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVD 678
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
D RHP + +Y L+ L EMK++GYVP+
Sbjct: 679 DARHPEVQAVYTYLQQLVNEMKKLGYVPDT 708
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA + +C S+ + +++H+++I+ S + N LI +Y++CG + A VF M
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP 485
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+ +WN++I L + G A LF M + D
Sbjct: 486 YVDSVSWNAMIAALAQHGHGVKAIELFEQMMKED 519
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/658 (37%), Positives = 372/658 (56%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C + ++ ++H+ +IK+ +S++ ++ L+D+Y C + A ++F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+NV W N M+ F + D SE+
Sbjct: 373 LTAQTENVVLW-------------------------------NVMLVAFGKLDNLSESFR 401
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++++ S L C +G Q+H + K+ + +VY+ S LIDMY
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A + + E ++VSW +LI+ Y Q+ ++AL+ F M+ GI+ D + +S
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A +G QIHA+ DL +GNALV +YA+CG+
Sbjct: 522 AISACAGIQALNQGRQIHAQ-SYVSGYSEDLSIGNALVSLYARCGR-------------- 566
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+K A L F K+ ++ +SWN LI+G+ Q+G E+AL +F +
Sbjct: 567 -----------------IKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMN 609
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + + +TFG+ ++A AN+A+++ G+Q H ++K G +SDI V N+LI Y
Sbjct: 610 RAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF------DSDIEVSNALITFYA 663
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED R F M E++ VSWNAMI G +Q+GYG EA+ LF+KM GE P+HVT +G
Sbjct: 664 KCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVG 723
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV +G YF SMSKEHGL P HY C+VDL+ RAG L A+ IE MP++
Sbjct: 724 VLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIE 783
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA IW +LL+AC VH+N+ +GE+ A+ LLE+EP +S YVLLSNMYA G+W + R
Sbjct: 784 PDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTR 843
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++MR RGV K+PG SWIE+ V+ F V D+ HPL +IY L L ++ +GY +
Sbjct: 844 QMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQD 901
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/554 (29%), Positives = 268/554 (48%), Gaps = 82/554 (14%)
Query: 22 FAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
FA +L +C + + ++HARII I N LI +YAK G + ARKV
Sbjct: 114 FASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKV---- 169
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
F ++ +D SW +M+SGF+Q+ EA+ F
Sbjct: 170 ---------------------------FDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFC 202
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+MH+ + Y F S LS C F +G Q+HAL+ K S + Y+ +AL+ +Y +
Sbjct: 203 EMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMP 262
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A +VF M+ ++ VS+NSLI+ Q G + ALE+F +M ++PD VT+AS++S
Sbjct: 263 NFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLS 322
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACAS A +G Q+H+ +++ + +D+++ AL+D+Y C
Sbjct: 323 ACASNGALCKGEQLHSYVIKA-GISSDMIVEGALLDLYVNC------------------- 362
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S +K+A MF NVV WN ++ + + E+ +FR ++ +
Sbjct: 363 ------------SDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKG 410
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T+ ++L C ++ L LG Q HT V+K G +F +++V + LIDMY K G
Sbjct: 411 LIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQF------NVYVCSVLIDMYAKHG 464
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++ I T+ E D VSW A+I G AQ+ EAL FK+ML G + D++ +
Sbjct: 465 KLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524
Query: 501 ACSHAGLVEEGRK-----YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
AC+ + +GR+ Y S S++ + +V L R G + EA E +
Sbjct: 525 ACAGIQALNQGRQIHAQSYVSGYSEDLSIG------NALVSLYARCGRIKEAYLEFEKID 578
Query: 556 MQPDAVIWGSLLAA 569
+ D++ W L++
Sbjct: 579 AK-DSISWNGLISG 591
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 155/552 (28%), Positives = 258/552 (46%), Gaps = 76/552 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LLD CL S S+ + +++H +I+K F +E + N+L+DVY G L G KVF+
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFE------ 69
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
MP R SW+ ++SGF + + L F M
Sbjct: 70 -------------------------DMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIE 104
Query: 145 ENFALSEYSFGSALSACAGS-VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
EN + +E SF S L AC+G + + Q+HA + + + LI +Y K G +
Sbjct: 105 ENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLII 164
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR+VFD + ++ VSW ++I+ + QNG +A+ +F M +GI P +SV+S C
Sbjct: 165 SARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT 224
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ F G Q+HA + + V NALV +Y++ A VF +M ++ VS
Sbjct: 225 KIKLFDVGEQLHALVFKYGSSLETYVC-NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++SG A Q G ++ AL LF +KR+ + P
Sbjct: 284 SLISGLA-------------------------------QQGFSDGALELFTKMKRDYLKP 312
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL+ACA+ L G Q H++V+K G+ SD+ V +L+D+Y+ C ++
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGI------SSDMIVEGALLDLYVNCSDIK 366
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+F T + V WN M+V + +E+ +F++M + G P+ T +L C+
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
G ++ G + + + K G + Y C ++D+ + G LD A ++ + + D V
Sbjct: 427 SVGALDLGEQIHTQVIKT-GFQ--FNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVV 482
Query: 562 IWGSLLAACKVH 573
W +L++ H
Sbjct: 483 SWTALISGYAQH 494
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ +C T+ LL+ C N L ++ H ++K G G ES + N L+D+
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGF----GNES--VLCNKLVDV 54
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y G ++ ++FE M R SW+ +I G + L LF M+ P ++
Sbjct: 55 YFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISF 114
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKE---HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VL ACS + G +Y + HGL ++ L + G + A+ + +
Sbjct: 115 ASVLRACSGHRI---GIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFD 171
Query: 553 AMPMQPDAVIWGSLLAA 569
+ + D+V W ++++
Sbjct: 172 NLCTK-DSVSWVAMISG 187
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/679 (36%), Positives = 392/679 (57%), Gaps = 79/679 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S +A + SC ++ ++HA +K F S+I + +D+YAKCG L
Sbjct: 275 VSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL------ 328
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DA R+F S+P+ +N+++ G ++++ EAL
Sbjct: 329 -------------------------ADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEAL 363
Query: 137 GYFVKMHSENFALSEYSFGSALSACA---GSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+F + +E S A SACA G +D G Q+H+L KS S++ + ++++
Sbjct: 364 QFFQLLLKSGLGFNEISLSGAFSACASIKGDLD---GRQLHSLSVKSTLRSNICVANSIL 420
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMYGKC +S A +FD M R+ VSWN++I +EQNG + L +F M+ +EPD+
Sbjct: 421 DMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQF 480
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T SV+ AC+S A G++IH R+++ L D +G AL+DMY KCG + EA+ + DR
Sbjct: 481 TYGSVLKACSSQQALNSGMEIHNRIIK-SGLGLDSFVGGALIDMYCKCGMIEEAKKIHDR 539
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ ++ +VSWNA+IAG+T +E+A F
Sbjct: 540 IE-------------------------------QQTMVSWNAIIAGFTLLKHSEDAHSFF 568
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + SV P ++T+ +L+ACANLA + LG+Q H ++K L SD+++ ++L+
Sbjct: 569 YEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELH------SDVYITSTLV 622
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG+++D +FE +D+V+WNAMI G AQ+G G EALG F++M L +P+H
Sbjct: 623 DMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHA 682
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T + +L AC+H G +++G YF++M E+GL P +HY+CM+D++GR+G + EA LI+
Sbjct: 683 TFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQE 742
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP + DAVIW +LL+ CK+H NI + E +L++EP +S +LLSN+YA+ G WG+V
Sbjct: 743 MPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKV 802
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+RK+MR + K+PGCSWIE+ V+ F+V +K HP +EIY +L +L EMK +GY+
Sbjct: 803 SEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYI 862
Query: 674 PNAS---DDEAYE-EQNGS 688
P+ D+E+ E EQ S
Sbjct: 863 PDIDFLIDEESEEYEQKAS 881
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 286/549 (52%), Gaps = 41/549 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ ++ C S+ ++ HAR+I S F +++I N L+ +Y +C L A KVF+KMS
Sbjct: 46 FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMS 105
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V ++N++I+G G ++ A+ F P+RD SWNSM+SGF Q+ +++ F+
Sbjct: 106 QRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLD 165
Query: 142 M-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M SE + +F L AC+ D +G QVH L+ + + DV GSAL+DMY KC
Sbjct: 166 MGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCK 225
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
R+ + ++F + +N V W+++I QN LE+F M GI + ASV
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFR 285
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+CA L+A K G Q+HA ++C+ +D+ +G A +DMYAKCG L +A+ +F+ +P
Sbjct: 286 SCAGLSALKVGTQLHAHALKCD-FGSDITVGTATLDMYAKCGSLADAQRIFNSLP----- 339
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ ++ +NA+I G +N + EAL F+LL +
Sbjct: 340 --------------------------KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSG 373
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ + +ACA++ GRQ H+ VK LR S+I V NS++DMY KC
Sbjct: 374 LGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLR------SNICVANSILDMYGKCE 427
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++ + C +F+ M RD VSWNA+I QNG E L LF ML +PD T VL
Sbjct: 428 ALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLK 487
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACS + G + + + K GL ++D+ + G ++EAK + + + Q
Sbjct: 488 ACSSQQALNSGMEIHNRIIKS-GLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT-M 545
Query: 561 VIWGSLLAA 569
V W +++A
Sbjct: 546 VSWNAIIAG 554
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 293/598 (48%), Gaps = 82/598 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D + FA +L +C + +VH I++ F ++ + L+D+YAKC L
Sbjct: 174 FDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRL------ 227
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DD+ ++F+ +P ++ W+++++G Q+D L
Sbjct: 228 -------------------------DDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGL 262
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +S+ + S +CAG K+GTQ+HA K + SD+ +G+A +DMY
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMY 322
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG ++ A+R+F+ + + ++ +N++I +N +AL+ F ++ SG+ +E++L+
Sbjct: 323 AKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLS 382
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SACAS+ +G Q+H+ ++ LR+++ + N+++DMY KC L+EA C+FD M
Sbjct: 383 GAFSACASIKGDLDGRQLHSLSVK-STLRSNICVANSILDMYGKCEALSEACCMFDEMER 441
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R + VSWNA+IA + QNG EE L LF +
Sbjct: 442 R-------------------------------DAVSWNAVIAAHEQNGNEEETLNLFASM 470
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P +T+G++L AC++ L G + H ++K GL D FVG +LIDMY
Sbjct: 471 LRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL------DSFVGGALIDMY 524
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +E+ +I + + ++ VSWNA+I G + +A F +ML KPD+ T
Sbjct: 525 CKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYA 584
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAM 554
VL AC++ V G++ + K L D Y + +VD+ + G + ++ + E
Sbjct: 585 IVLDACANLASVGLGKQIHGQIIK---LELHSDVYITSTLVDMYSKCGNMQDSALVFEKA 641
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGE----YVAKKLLEIEPSNSGPYVLLSNMYAELG 608
P D V W +++ H LGE Y + LE N +V + A +G
Sbjct: 642 P-NKDFVTWNAMICGYAQHG---LGEEALGYFERMQLENVRPNHATFVSILRACAHMG 695
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 72/449 (16%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F + C+ K G Q HA + S + DVY+ + L+ MY +C ++ A +VF+ M
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 213 RERNIVS-------------------------------WNSLITCYEQNGPASDALEVFV 241
+R+++S WNS+++ + QNG +++VF+
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 242 RMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M S + D+ T A V+ AC+ L G+Q+H ++R D+V G+AL+DMYAK
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRM-GFYKDVVTGSALLDMYAK 223
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C +L+++ +F +P+ +N V W+A+IAG
Sbjct: 224 CKRLDDSLKIFSEIPV-------------------------------KNWVCWSAIIAGC 252
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
QN E+ L LF+ +++ + + + ++ +CA L+ L++G Q H H +K
Sbjct: 253 VQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFG--- 309
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
SDI VG + +DMY KCGS+ D RIF ++ + +NA+IVGC +N G EAL F
Sbjct: 310 ---SDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFF 366
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+ +L G + +++ G AC+ +GR+ S+S + L ++D+ G+
Sbjct: 367 QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ-LHSLSVKSTLRSNICVANSILDMYGK 425
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
L EA + + M + DAV W +++AA
Sbjct: 426 CEALSEACCMFDEME-RRDAVSWNAVIAA 453
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/675 (37%), Positives = 389/675 (57%), Gaps = 74/675 (10%)
Query: 38 TRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
T VHA I+++ S ++ N L+ YA G L AR+VFD M +N+ T NS+++ L
Sbjct: 29 TAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALA 88
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL--SEYSF 154
+ G + D RLF S+P+RD S+N++++GF++ + A G +V + + + S +
Sbjct: 89 RAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITM 148
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+ + D +G QVH + + + + + GS L+DMY K G + ARRVFD M
Sbjct: 149 SGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEG 208
Query: 215 RNIV-------------------------------SWNSLITCYEQNGPASDALEVFVRM 243
+N+V +W +++T QNG S+AL+VF RM
Sbjct: 209 KNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM 268
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCG 302
A G+ D+ T S+++AC +LAA +EG QIHA + R C + +++ +G+ALVDMY+KC
Sbjct: 269 RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYE--DNVFVGSALVDMYSKC- 325
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
SV+ A +F +M+ +N++SW A+I GY Q
Sbjct: 326 ------------------------------RSVRLAEAVFRRMMWKNIISWTAMIVGYGQ 355
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NG EEA+ +F ++R+ + P +T G+++++CANLA L+ G Q H L +SG
Sbjct: 356 NGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC------LALVSGL 409
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ V N+L+ +Y KCGS+ED R+F+ M D VSW A+++G AQ G E + LF+K
Sbjct: 410 RPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEK 469
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML G KPD VT IGVL ACS +GLV++GR YF SM ++H + PL DHYTCM+DL R+G
Sbjct: 470 MLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSG 529
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L +A+ I+ MP PDA W +LL+AC++ ++ +G++ A+ LL+++P N YVLL +
Sbjct: 530 WLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCS 589
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
M+A G W +V ++R+ MR R V K+PGCSWI+ V++F D+ HP ++ IY L+
Sbjct: 590 MHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQW 649
Query: 663 LTREMKRVGYVPNAS 677
L +M GY P+ S
Sbjct: 650 LNSKMVEEGYKPDVS 664
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ + +++HA I ++ + +F+ + L+D+Y+KC + A V
Sbjct: 275 IDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAV 334
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M KN+ +W ++I G + G ++A R+F+ M +RD G D
Sbjct: 335 FRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM-QRD---------GIKPDD------ 378
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
++ GS +S+CA + G Q H L S V + +AL+ +Y
Sbjct: 379 ---------------FTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLY 423
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L+ Y Q G A + +++F +M++ G++PD VT
Sbjct: 424 GKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFI 483
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ +G + + + ++D+Y++ G L +A +MP
Sbjct: 484 GVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMP 542
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 270/715 (37%), Positives = 400/715 (55%), Gaps = 57/715 (7%)
Query: 11 VGDLAFLDSSPFAKLLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
V D+ L + FA+L C ++ S S R VH +I S F I NRLID+Y K
Sbjct: 4 VLDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSD 63
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFA 127
ARK+FD++ +V ++IT G + A +F P RD +N+M++G++
Sbjct: 64 FVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYS 123
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACA-------------GSVDFKMGTQV- 173
+ A+ F M NF +++F S LSA G+V K G ++
Sbjct: 124 HMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTV-VKFGIEIF 182
Query: 174 ----HALLS------------------------KSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ALLS + ++ + LI Y + G ++ A
Sbjct: 183 PAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGA 242
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R + D M E+ ++WN++I+ Y +G DAL +F +M G++ DE T SV+SACA
Sbjct: 243 REILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302
Query: 266 AAFKEGLQIHARLMRCEKLRND----LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
F G Q+HA +++ E L D L +GN L+ +Y K GK++ AR +F MP++++++
Sbjct: 303 GFFLLGKQVHAYILKNE-LNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIIT 361
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++SGY A ++ A+ F +M E+N+++W +I+G QNG E+AL LF +K +
Sbjct: 362 WNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY 421
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P Y F + AC+ L L+ GRQ H +V G +S + VGN++I MY +CG
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVH------LGHDSTLSVGNAMITMYARCGI 475
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE +F TM D VSWN+MI Q+G+G +A+ L+++ML G PD T + VL A
Sbjct: 476 VEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSA 535
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSHAGLVEEG +YF+SM + +G+AP +DHY M+DL RAG +AK +I++MP + A
Sbjct: 536 CSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAP 595
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW +LLA C+ H N+ LG A+KL ++ P + G YVLLSNMYA LGRW +V R RKLMR
Sbjct: 596 IWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMR 655
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RGV K+P CSW E+ V+VF+V D HP IY L+ L EMK++GY+P+
Sbjct: 656 DRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDT 710
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/623 (38%), Positives = 370/623 (59%), Gaps = 8/623 (1%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+Q L+D+ +CG + A K F ++ N + NS++ G K +D A +F SMPERD
Sbjct: 196 VQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
SWN ++S ++ R EAL V MH + ++ S+L+ACA + G Q+H
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+ ++ D Y+ SA++++Y KCG A+RVF +R+RN VSW LI + Q G S+
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSE 375
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
++E+F +M A + D+ LA+++S C + G Q+H+ ++ R +V+ N+L+
Sbjct: 376 SVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRA-VVVSNSLI 434
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
MYAKCG L A +F+ M R++VS T M++ Y++ ++ AR F M RNV++WNA
Sbjct: 435 SMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNA 494
Query: 356 LIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++ Y Q+G E+ L ++ +L + V P T+ L CA++ +LG Q H VK
Sbjct: 495 MLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV 554
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
GL D V N++I MY KCG + + + F+ + +D VSWNAMI G +Q+G G
Sbjct: 555 GLIL------DTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGK 608
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+A+ +F +L G KPD+++ + VL CSH+GLVEEG+ YF M ++H ++P +H++CM
Sbjct: 609 QAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCM 668
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
VDLLGRAG L EAK LI+ MPM+P A +WG+LL+ACK H N L E AK L +++ S
Sbjct: 669 VDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGS 728
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNK 654
G Y+LL+ MYA+ G+ + +VRKLMR +G+ K PG SW+E+ V+VF +D HP
Sbjct: 729 GGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVI 788
Query: 655 EIYLVLKMLTREMKRVGYVPNAS 677
I L L ++ +GYV S
Sbjct: 789 AIREKLDELMEKIAHLGYVRTES 811
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 255/541 (47%), Gaps = 75/541 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF- 77
+ A L SC +++ R +H+R+I AS +F+QN L+ Y CG L AR +
Sbjct: 25 TQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLR 84
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+++ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q +F AL
Sbjct: 85 DEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALD 144
Query: 138 YFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV M +L + ++FG + +C ++ Q+ LLSK D + +AL+DM
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDML 204
Query: 197 GKCGRVSCARR-------------------------------VFDGMRERNIVSWNSLIT 225
+CG + A + +F M ER++VSWN +I+
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
++G +AL++ V M G+ PD T S ++ACA L++ + G Q+H +++R
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIR-NLPH 323
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D + +A+V++YAKCG EA+ VF + RN VS
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVS------------------------ 359
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
W LI G+ Q G E++ LF ++ E + + L++ C N D+ LG
Sbjct: 360 -------WTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGS 412
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG + V NSLI MY KCG++++ IF M ERD VSW MI
Sbjct: 413 QLHSLCLK------SGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMIT 466
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + +T +L A G E+G K +S M E +
Sbjct: 467 AYSQVGNIAKAREFFDDM----STRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVI 522
Query: 526 P 526
P
Sbjct: 523 P 523
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 218/428 (50%), Gaps = 77/428 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ + L +C R S+ +++H ++I++ + ++ + ++++YAKCGC A++VF
Sbjct: 290 DSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVF 349
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++N +W +I G L++G C FSE++
Sbjct: 350 SSLRDRNSVSWTVLIGGFLQYG-----------------C--------------FSESVE 378
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +E A+ +++ + +S C ++D +G+Q+H+L KS ++ V + ++LI MY
Sbjct: 379 LFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYA 438
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
KC G ++ AR FD M RN+++WN+++
Sbjct: 439 KCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGA 498
Query: 227 YEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q+G D L+++ M+ + PD VT ++ CA + A K G QI ++ +
Sbjct: 499 YIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLIL 558
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ V+ NA++ MY+KCG+++EAR FD + +++VS +M++GY++ K A +F +
Sbjct: 559 DTSVV-NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDI 617
Query: 346 LER----NVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHYTFGNLLNACANLAD 400
L + + +S+ A+++G + +G EE F ++KR+ ++ P F +C + D
Sbjct: 618 LNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHF-----SC--MVD 670
Query: 401 LQLGRQAH 408
L LGR H
Sbjct: 671 L-LGRAGH 677
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 211/421 (50%), Gaps = 24/421 (5%)
Query: 163 GSVDFKMGTQVHALLSKSRYSS------------DVYMGSALIDMYGKCGRVSCARRVFD 210
SV F T +HA LS S +V + +++ Y K G +S A +F
Sbjct: 57 ASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFG 116
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAAFK 269
M R++ SWN++++ Y Q+G +AL++FV M +G P+ T V+ +C +L +
Sbjct: 117 RMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHE 176
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
LQ+ L + + ++D + ALVDM +CG ++ A F R+ ++ SM+ GY
Sbjct: 177 VALQLLGLLSKFDS-QDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGY 235
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
AK+ V A +F M ER+VVSWN +I+ +++G EAL + + + V P T+
Sbjct: 236 AKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYT 295
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+ L ACA L+ L+ G+Q H V+++ D +V ++++++Y KCG ++ R+F
Sbjct: 296 SSLTACARLSSLEWGKQLHVQVIRNLPHI------DPYVASAMVELYAKCGCFKEAKRVF 349
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
++ +R+ VSW +I G Q G +E++ LF +M D + ++ C + +
Sbjct: 350 SSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDIC 409
Query: 510 EGRKYFS-SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G + S + H A + + ++ + + G L A+ + M + D V W ++
Sbjct: 410 LGSQLHSLCLKSGHTRAVVVSN--SLISMYAKCGNLQNAELIFNFMA-ERDIVSWTGMIT 466
Query: 569 A 569
A
Sbjct: 467 A 467
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 160/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L +D A L+ C + + ++H+ +KS + + N LI +YAKCG
Sbjct: 382 QMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCG 441
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A +F+ M+ +++ +W +IT + G I A F M R+ +WN+M+ + Q
Sbjct: 442 NLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQ 501
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M +E + ++ ++ + CA K+G Q+ K D
Sbjct: 502 HGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTS 561
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A+I MY KCGR+S AR+ FD + +++VSWN++IT Y Q+G A+E+F ++ G
Sbjct: 562 VVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKG 621
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 622 AKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEA 681
Query: 308 RCVFDRMPIR 317
+ + D MP++
Sbjct: 682 KNLIDEMPMK 691
>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 767
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/621 (40%), Positives = 360/621 (57%), Gaps = 42/621 (6%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H K F + ++ ++D+Y KCG + A+KVF + N ++F WNS+I G K+G
Sbjct: 148 QLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYG 207
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+ A LFA MPERD SWN+M+S +QH +E L F++M ++ F + ++ S LS
Sbjct: 208 SVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLS 267
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
AC D + G +HA + + DVY G LIDMY KCGR+ AR+VFDG+ E N VS
Sbjct: 268 ACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVS 327
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W SLI Q G +AL +F +M + D+ TLA+V+ C S G Q+HA +
Sbjct: 328 WTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTI 387
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
L + + + NALV MYAKCG + +A F+ MPIR+++S T+M++ +++A V+ AR
Sbjct: 388 -TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAR 446
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F KM ERNV+SWN+++A Y Q G EE L ++ + RE V TF ++ACA+LA
Sbjct: 447 EYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLA 506
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L LG Q K G S++ V NS++ MY +CG +E+ ++F ++V ++ VS
Sbjct: 507 VLILGNQILAQAEKLGF------SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVS 560
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNAM+ G AQNG G + + +F+KML G PD ++ + VL
Sbjct: 561 WNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLS------------------- 601
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
DLLGRAG L++AK LI MP +P+A IWG+LLAAC++H N L
Sbjct: 602 ----------------DLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLA 645
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E K LLE++ G Y LL+N+Y+E G+ V VRKLMR +GV K PGCSWIE+
Sbjct: 646 ELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNR 705
Query: 640 VNVFMVKDKRHPLNKEIYLVL 660
V+VF V D HP K+++ +L
Sbjct: 706 VHVFTVDDTNHPQIKDVHRML 726
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 203/416 (48%), Gaps = 75/416 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +A +L +C + +HARI++ + +++ LID+YAKCG L AR+VF
Sbjct: 258 NSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVF 317
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D ++ N +W S+I G+ + GF ++A LF M E
Sbjct: 318 DGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMRE------------------------ 353
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
V + S+ F L+ + L C D +G Q+HA S V + +AL+ MY
Sbjct: 354 --VPVASDQFTLA-----TVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 406
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
KC G V AR FD M ERN++SWNS++
Sbjct: 407 KCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 466
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL-- 284
Y Q G + L+V+++M+ G++ D +T ++ +SACA LA G QI L + EKL
Sbjct: 467 YMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQI---LAQAEKLGF 523
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+++ + N++V MY++CG++ EA+ +F + ++N+VS +M++GYA+ + +F K
Sbjct: 524 SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEK 583
Query: 345 MLE----RNVVSWNALIAGYT-QNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
ML + +S+ ++++ + G+ E+A L + + P +G LL AC
Sbjct: 584 MLNIGNVPDQISYVSVLSDLLGRAGQLEQAKNLINQMPFK---PNAAIWGALLAAC 636
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 183/368 (49%), Gaps = 39/368 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L CL K +S ++HA I S + + N L+ +YAKCG ++ A F
Sbjct: 359 DQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAF 418
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M +++ +W ++IT + G ++ A F MPER+ SWNSM++ + Q + E L
Sbjct: 419 ELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLK 478
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+++M E +F +++SACA +G Q+ A K +SS+V + ++++ MY
Sbjct: 479 VYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYS 538
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG++ A+++F + +N+VSWN+++ Y QNG +E+F +M+ G PD+++ S
Sbjct: 539 RCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVS 598
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S D+ + G+L +A+ + ++MP +
Sbjct: 599 VLS-----------------------------------DLLGRAGQLEQAKNLINQMPFK 623
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV---SWNALIAGYTQNGENEEALGLF 373
N ++++ + K A L +LE + S+ L Y+++G+ + +
Sbjct: 624 PNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVR 683
Query: 374 RLLKRESV 381
+L++ + V
Sbjct: 684 KLMRDKGV 691
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ CA+L + + R+ H ++ GL+ S IF+ N L++MY CG + D R+F
Sbjct: 1 MKECASLRSIPIARKLHAQLIFMGLK------SSIFLQNHLLNMYSNCGLISDAYRVFGG 54
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
++ + SWN MI G A +G EA LF+KM + D V+ ++ H G +E
Sbjct: 55 IMFPNVYSWNTMISGFADSGQMREAEKLFEKM----PERDSVSWNSMMSGYFHNGELEAT 110
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
K F SM ++ P ++C++ G G L A L
Sbjct: 111 IKVFVSMVRDCCCVPDPFSFSCVMKASGSLGYLKLALQL 149
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/687 (37%), Positives = 380/687 (55%), Gaps = 73/687 (10%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+I ++ F SP + LL +C + ++H+ + K+ +S+ ++ L+D+Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KCG + A +F+ NV W N M+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLW-------------------------------NLMLV 318
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
F Q + +++ F +M + +++++ L C + + +G Q+H+L K+ + S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D+Y+ LIDMY K G + ARRV + ++E+++VSW S+I Y Q+ DAL F M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI PD + LAS +S CA + A ++GLQIHAR+ D+ + NALV++YA+CG++
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCGRI 497
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
EA F+ + ++ ++WN L++G+ Q+G
Sbjct: 498 REAFSSFEEIE-------------------------------HKDEITWNGLVSGFAQSG 526
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EEAL +F + + V +TF + L+A ANLA+++ G+Q H V+K G F
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF------ 580
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ VGN+LI +Y KCGS ED F M ER+ VSWN +I C+Q+G G EAL LF +M
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G KP+ VT IGVL ACSH GLVEEG YF SMS E+G+ P DHY C++D+ GRAG L
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
D AK IE MP+ DA++W +LL+ACKVH+NI +GE+ AK LLE+EP +S YVLLSN Y
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A +W +VRK+MR RGV K+PG SWIE+ V+ F V D+ HPL ++IY L ++
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Query: 665 REMKRVGYVPNASDDEAYEEQNGSNST 691
+ +VGY +EQ G + T
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPT 847
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 257/534 (48%), Gaps = 81/534 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA+ + + N LID+Y+K G + AR+VF++
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE--------------------- 102
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ RD SW +M+SG+AQ+ EALG + +MH + Y S LS+
Sbjct: 103 ----------LSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + F G +HA K + S++++G+A+I +Y +CG A RVF M R+ V++
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q G ALE+F M SG+ PD VT++S+++ACASL ++G Q+H+ L +
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK 272
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +D ++ +L+D+Y KCG V++A +
Sbjct: 273 A-GISSDYIMEGSLLDLYVKCG-------------------------------DVETALV 300
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F NVV WN ++ + Q + ++ LF ++ + P +T+ +L C +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ LG Q H+ VK G ESD++V LIDMY K G +E R+ E + E+D VSW
Sbjct: 361 IDLGEQIHSLSVKTGF------ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-----HAGLVEEGRKYF 515
+MI G Q+ +AL FK+M CG PD++ + + C+ GL R Y
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S S + + + +V+L R G + EA + E + + D + W L++
Sbjct: 475 SGYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSG 521
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 226/466 (48%), Gaps = 45/466 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS-VDFKM 169
M R S ++GF H+ ++ L F ++ L F AL AC G+ +++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
++HA +G+ LID+Y K G V ARRVF+ + R+ VSW ++++ Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG +AL ++ +M +G+ P L+SV+S+C F +G IHA+ + +++
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSEIF 179
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNA++ +Y +CG A VF MP R+ V+ +++SG+A
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA------------------- 220
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
Q G E AL +F ++ + P T +LL ACA+L DLQ G Q H+
Sbjct: 221 ------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K G+ SD + SL+D+Y+KCG VE IF + + V WN M+V Q
Sbjct: 269 YLFKAGI------SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ LF +M G +P+ T +L C+ ++ G + S+S + G D
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFE--SD 379
Query: 530 HYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y ++D+ + G L++A+ ++E M + D V W S++A H
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQH 424
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M R S +AG+ + + + L LF R+ H G L ACA A G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQ-----HGGLGPLDFACALRACRGNG 55
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R+ H G VGN LID+Y K G V R+FE + RD VSW AM+
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQNG G EALGL+++M G P + VL +C+ A L +GR + +HG
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYKHGF 174
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
++ L R G A+ + MP + D V + +L++ H GE+ +
Sbjct: 175 CSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALE 230
Query: 585 KLLEIEPSNSGP-YVLLSNMYAELGRWGEVVRVRKL 619
E++ S P V +S++ A G++ + +L
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 256/687 (37%), Positives = 380/687 (55%), Gaps = 73/687 (10%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+I ++ F SP + LL +C + ++H+ + K+ +S+ ++ L+D+Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KCG + A +F+ NV W N M+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLW-------------------------------NLMLV 318
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
F Q + +++ F +M + +++++ L C + + +G Q+H+L K+ + S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D+Y+ LIDMY K G + ARRV + ++E+++VSW S+I Y Q+ DAL F M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI PD + LAS +S CA + A ++GLQIHAR+ D+ + NALV++YA+CG++
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCGRI 497
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
EA F+ + ++ ++WN L++G+ Q+G
Sbjct: 498 REAFSSFEEIE-------------------------------HKDEITWNGLVSGFAQSG 526
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EEAL +F + + V +TF + L+A ANLA+++ G+Q H V+K G F
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF------ 580
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ VGN+LI +Y KCGS ED F M ER+ VSWN +I C+Q+G G EAL LF +M
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G KP+ VT IGVL ACSH GLVEEG YF SMS E+G+ P DHY C++D+ GRAG L
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
D AK IE MP+ DA++W +LL+ACKVH+NI +GE+ AK LLE+EP +S YVLLSN Y
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A +W +VRK+MR RGV K+PG SWIE+ V+ F V D+ HPL ++IY L ++
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Query: 665 REMKRVGYVPNASDDEAYEEQNGSNST 691
+ +VGY +EQ G + T
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPT 847
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 257/534 (48%), Gaps = 81/534 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA+ + + N LID+Y+K G + AR+VF++
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE--------------------- 102
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ RD SW +M+SG+AQ+ EALG + +MH + Y S LS+
Sbjct: 103 ----------LSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + F G +HA K + S++++G+A+I +Y +CG A RVF M R+ V++
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q G ALE+F M SG+ PD VT++S+++ACASL ++G Q+H+ L +
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK 272
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +D ++ +L+D+Y KCG V++A +
Sbjct: 273 A-GISSDYIMEGSLLDLYVKCG-------------------------------DVETALV 300
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F NVV WN ++ + Q + ++ LF ++ + P +T+ +L C +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ LG Q H+ VK G ESD++V LIDMY K G +E R+ E + E+D VSW
Sbjct: 361 IDLGEQIHSLSVKTGF------ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-----HAGLVEEGRKYF 515
+MI G Q+ +AL FK+M CG PD++ + + C+ GL R Y
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S S + + + +V+L R G + EA + E + + D + W L++
Sbjct: 475 SGYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSG 521
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 226/466 (48%), Gaps = 45/466 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS-VDFKM 169
M R S ++GF H+ ++ L F ++ L F AL AC G+ +++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
++HA +G+ LID+Y K G V ARRVF+ + R+ VSW ++++ Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG +AL ++ +M +G+ P L+SV+S+C F +G IHA+ + +++
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSEIF 179
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNA++ +Y +CG A VF MP R+ V+ +++SG+A
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA------------------- 220
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
Q G E AL +F ++ + P T +LL ACA+L DLQ G Q H+
Sbjct: 221 ------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K G+ SD + SL+D+Y+KCG VE IF + + V WN M+V Q
Sbjct: 269 YLFKAGI------SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ LF +M G +P+ T +L C+ ++ G + S+S + G D
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFE--SD 379
Query: 530 HYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y ++D+ + G L++A+ ++E M + D V W S++A H
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQH 424
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M R S +AG+ + + + L LF R+ H G L ACA A G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQ-----HGGLGPLDFACALRACRGNG 55
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R+ H G VGN LID+Y K G V R+FE + RD VSW AM+
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQNG G EALGL+++M G P + VL +C+ A L +GR + +HG
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYKHGF 174
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
++ L R G A+ + MP + D V + +L++ H GE+ +
Sbjct: 175 CSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALE 230
Query: 585 KLLEIEPSNSGPY-VLLSNMYAELGRWGEVVRVRKL 619
E++ S P V +S++ A G++ + +L
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/738 (34%), Positives = 401/738 (54%), Gaps = 107/738 (14%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q+V D D F +L++C +++V R ++ I+K+ + +++F+ LI+++ KC
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G I DA+++F ++P RD +W SM++G A
Sbjct: 260 GD-------------------------------IGDATKVFDNLPTRDLVTWTSMITGLA 288
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+H RF +A F +M E + +F S L AC + G +VHA + + + +++Y
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ MY KCG + A VFD ++ RN+VSW ++I + Q+G +A F +M+ SG
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLM-------------------RCEKLRN-- 286
IEP+ VT S++ AC+S +A K G QI ++ +C L++
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 287 ---------DLVLGNALVDMYAKCGKLNEARCVFDRM-------------PIRNVVSET- 323
++V NA++ Y + + + A F + I NV +
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 324 -------------------------SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
++VS + + SA+ +F M +R++VSWN +IA
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G+ Q+G+N+ A F++++ + P TF LLNACA+ L GR+ H + +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF-- 646
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ D+ VG LI MY KCGS+ED ++F + +++ SW +MI G AQ+G G EAL
Sbjct: 647 ----DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALE 702
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
LF +M G KPD +T +G L AC+HAGL+EEG +F SM KE + P +HY CMVDL
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLF 761
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L+EA I M ++PD+ +WG+LL AC+VH N+ L E A+K LE++P+++G +V
Sbjct: 762 GRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFV 821
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
+LSN+YA G W EV ++RK+M RGVVK+PG SWIE+ G V+ F DK HP +EI+
Sbjct: 822 ILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881
Query: 659 VLKMLTREMKRVGYVPNA 676
L+ L EM+++GYVP+
Sbjct: 882 ELERLHMEMRQLGYVPDT 899
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 275/552 (49%), Gaps = 71/552 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ LL C++ K++ D R++ I KS +IF+
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFM------------------------- 147
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
WN++I K G A ++F M E+D SWN ++ G+ QH + EA +
Sbjct: 148 ------WNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQ 201
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++ + +F S L+ACA + + G +++ L+ K+ + +D+++G+ALI+M+ KCG
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +VFD + R++V+W S+IT ++G A +F RM G++PD+V S++ A
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C A ++G ++HAR M+ ++ +G A++ MY KCG + +A VFD + RNVVS
Sbjct: 322 CNHPEALEQGKKVHAR-MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS 380
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T+M++G+A+ + A L F KM+E +
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIE------------------------------ 410
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF ++L AC++ + L+ G+Q H+++ +G SD V +L+ MY KCGS
Sbjct: 411 -PNRVTFMSILGACSSPSALKRGQQIQDHIIE------AGYGSDDRVRTALLSMYAKCGS 463
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++D R+FE + +++ V+WNAMI Q+ AL F+ +L G KP+ T +L
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C + +E G K+ + + GL +V + G L AK L MP + D V
Sbjct: 524 CKSSDSLELG-KWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLV 581
Query: 562 IWGSLLAACKVH 573
W +++A H
Sbjct: 582 SWNTIIAGFVQH 593
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 260/503 (51%), Gaps = 46/503 (9%)
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+D N++++ ++ +F+EA+ ++ S + + ++ + L C + G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+ + KS D++M + LI+MY KCG A+++FD MRE+++ SWN L+ Y Q+G
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+A ++ +M+ ++PD+ T S+++ACA +G +++ +++ DL +G A
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTA 251
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L++M+ KCG + +A VFD +P R++V+ TSM++G A+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR---------------------- 289
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+G ++A LF+ ++ E V P F +LL AC + L+ G++ H + +
Sbjct: 290 ---------HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G +++I+VG +++ MY KCGS+ED +F+ + R+ VSW AMI G AQ+G
Sbjct: 341 ------VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EA F KM+ G +P+ VT + +L ACS ++ G++ + E G T
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTA 453
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEP 591
++ + + G L +A + E + Q + V W +++ A H + LL+ I+P
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 592 SNSGPYVLL----SNMYAELGRW 610
++S +L S+ ELG+W
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKW 535
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 226/465 (48%), Gaps = 78/465 (16%)
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
G+C + C VF +++ N+++ + G ++A++V R+ +S I+ T +
Sbjct: 59 GRCPKGRCV--VFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYS 114
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++ C +G +I+ + + ++ D+ + N L++MYAKCG
Sbjct: 115 ALLQLCIKFKNLGDGERIYNHIKK-SGVQPDIFMWNTLINMYAKCG-------------- 159
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N +S A+ +F M E++V SWN L+ GY Q+G EEA L +
Sbjct: 160 -NTIS----------------AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM 202
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++SV P TF ++LNACA+ ++ GR+ + ++K +G ++D+FVG +LI+M+
Sbjct: 203 VQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILK------AGWDTDLFVGTALINMH 256
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+KCG + D ++F+ + RD V+W +MI G A++G +A LF++M G +PD V +
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGL-----------------APLKD---------- 529
+L AC+H +E+G+K + M KE G ++D
Sbjct: 317 SLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 530 ----HYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+T M+ + G +DEA M ++P+ V + S+L AC + G+ +
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 583 AKKLLEI-EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
++E S+ L +MYA+ G + RV + + K+ VV
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVV 480
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/738 (34%), Positives = 401/738 (54%), Gaps = 107/738 (14%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q+V D D F +L++C +++V R ++ I+K+ + +++F+ LI+++ KC
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G I DA+++F ++P RD +W SM++G A
Sbjct: 260 GD-------------------------------IGDATKVFDNLPTRDLVTWTSMITGLA 288
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+H RF +A F +M E + +F S L AC + G +VHA + + + +++Y
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ MY KCG + A VFD ++ RN+VSW ++I + Q+G +A F +M+ SG
Sbjct: 349 VGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLM-------------------RCEKLRN-- 286
IEP+ VT S++ AC+S +A K G QI ++ +C L++
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468
Query: 287 ---------DLVLGNALVDMYAKCGKLNEARCVFDRM-------------PIRNVVSET- 323
++V NA++ Y + + + A F + I NV +
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 324 -------------------------SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
++VS + + SA+ +F M +R++VSWN +IA
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G+ Q+G+N+ A F++++ + P TF LLNACA+ L GR+ H + +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAF-- 646
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ D+ VG LI MY KCGS+ED ++F + +++ SW +MI G AQ+G G EAL
Sbjct: 647 ----DCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALE 702
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
LF +M G KPD +T +G L AC+HAGL+EEG +F SM KE + P +HY CMVDL
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLF 761
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L+EA I M ++PD+ +WG+LL AC+VH N+ L E A+K LE++P+++G +V
Sbjct: 762 GRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFV 821
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
+LSN+YA G W EV ++RK+M RGVVK+PG SWIE+ G V+ F DK HP +EI+
Sbjct: 822 ILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881
Query: 659 VLKMLTREMKRVGYVPNA 676
L+ L EM+++GYVP+
Sbjct: 882 ELERLHMEMRQLGYVPDT 899
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 175/622 (28%), Positives = 301/622 (48%), Gaps = 110/622 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ LL C++ K++ D R++ I KS +IF++N LI++YAKCG
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCG------------- 159
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+I A ++F M E+D SWN ++ G+ QH + EA +
Sbjct: 160 -------NTI-----------SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQ 201
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++ + +F S L+ACA + + G +++ L+ K+ + +D+++G+ALI+M+ KCG
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +VFD + R++V+W S+IT ++G A +F RM G++PD+V S++ A
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C A ++G ++HAR M+ ++ +G A++ MY KCG + +A VFD + RNVVS
Sbjct: 322 CNHPEALEQGKKVHAR-MKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS 380
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLER----NVVSW------------------------ 353
T+M++G+A+ + A L F KM+E N V++
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 354 -----------NALIAGYTQNGENEEALGLFRLLKRESVC-------------------- 382
AL++ Y + G ++A +F + +++V
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 383 -----------PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
P TF ++LN C + L+LG+ H ++K GL ESD+ V N+
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL------ESDLHVSNA 554
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+ M++ CG + +F M +RD VSWN +I G Q+G A FK M G KPD
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPD 614
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+T G+L AC+ + EGR+ ++ E T ++ + + G +++A +
Sbjct: 615 KITFTGLLNACASPEALTEGRR-LHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 552 EAMPMQPDAVIWGSLLAACKVH 573
+P + + W S++A H
Sbjct: 674 HKLP-KKNVYSWTSMIAGYAQH 694
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 260/503 (51%), Gaps = 46/503 (9%)
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+D N++++ ++ +F+EA+ ++ S + + ++ + L C + G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+ + KS D++M + LI+MY KCG A+++FD MRE+++ SWN L+ Y Q+G
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+A ++ +M+ ++PD+ T S+++ACA +G +++ +++ DL +G A
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKA-GWDTDLFVGTA 251
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L++M+ KCG + +A VFD +P R++V+ TSM++G A+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR---------------------- 289
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+G ++A LF+ ++ E V P F +LL AC + L+ G++ H + +
Sbjct: 290 ---------HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G +++I+VG +++ MY KCGS+ED +F+ + R+ VSW AMI G AQ+G
Sbjct: 341 ------VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EA F KM+ G +P+ VT + +L ACS ++ G++ + E G T
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII-EAGYGSDDRVRTA 453
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEP 591
++ + + G L +A + E + Q + V W +++ A H + LL+ I+P
Sbjct: 454 LLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 592 SNSGPYVLL----SNMYAELGRW 610
++S +L S+ ELG+W
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKW 535
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 226/465 (48%), Gaps = 78/465 (16%)
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
G+C + C VF +++ N+++ + G ++A++V R+ +S I+ T +
Sbjct: 59 GRCPKGRCV--VFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYS 114
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++ C +G +I+ + + ++ D+ + N L++MYAKCG
Sbjct: 115 ALLQLCIKFKNLGDGERIYNHIKK-SGVQPDIFMRNTLINMYAKCG-------------- 159
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N +S A+ +F M E++V SWN L+ GY Q+G EEA L +
Sbjct: 160 -NTIS----------------AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM 202
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++SV P TF ++LNACA+ ++ GR+ + ++K +G ++D+FVG +LI+M+
Sbjct: 203 VQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILK------AGWDTDLFVGTALINMH 256
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+KCG + D ++F+ + RD V+W +MI G A++G +A LF++M G +PD V +
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGL-----------------APLKD---------- 529
+L AC+H +E+G+K + M KE G ++D
Sbjct: 317 SLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 530 ----HYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+T M+ + G +DEA M ++P+ V + S+L AC + G+ +
Sbjct: 376 RNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 583 AKKLLEI-EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
++E S+ L +MYA+ G + RV + + K+ VV
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVV 480
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/670 (37%), Positives = 377/670 (56%), Gaps = 71/670 (10%)
Query: 41 VHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
VH I+K+ A F+ N L+ YAK G L AR+VFD+M + N+FT N++++ L
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG-YFVKMHSENFALSEYSFGSAL 158
+ D RLFASMPERD S+N++++GF+ + ++ Y + E+ + + + +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR----- 213
+ D +G VH + + + + ++GS L+DMY K G + ARRVF M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 214 --------------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+R+ ++W +++T QNG +AL+VF RM A G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ D+ T S+++AC +LAA +EG QIHA + R +++ +G+ALVDMY+KC
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTW-YEDNVFVGSALVDMYSKC------ 326
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
S++ A +F +M RN++SW A+I GY QN +E
Sbjct: 327 -------------------------RSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ F ++ + + P +T G+++++CANLA L+ G Q H L +SG I
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC------LALVSGLMRYIT 415
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+L+ +Y KCGS+ED R+F+ M D VSW A++ G AQ G E + LF+KML G
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG 475
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KPD VT IGVL ACS AGLVE+G YF SM K+HG+ P+ DHYTCM+DL R+G EA
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ I+ MP PDA W +LL++C++ N+ +G++ A+ LLE +P N YVLL +M+A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W EV +R+ MR R V K+PGCSWI+ V++F D+ HP + IY L+ L +M
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 668 KRVGYVPNAS 677
GY P+ S
Sbjct: 656 AEEGYKPDVS 665
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ + +++HA I ++ + +F+ + L+D+Y+KC + A V
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+ +N+ +W +M+ G+ Q+ EA+
Sbjct: 336 FRRMTCRNIISW-------------------------------TAMIVGYGQNACSEEAV 364
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + +++ GS +S+CA + G Q H L S + + +AL+ +Y
Sbjct: 365 RAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLY 424
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L+T Y Q G A + +++F +M+A+G++PD VT
Sbjct: 425 GKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFI 484
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ ++G + + + ++D+Y++ G+ EA +MP
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/728 (35%), Positives = 396/728 (54%), Gaps = 106/728 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS + KLL SC+++K ++ ++VH I++ ++I N L+ +Y CG
Sbjct: 42 VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS------- 94
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+++A RLF + SWN M+SG+A EA
Sbjct: 95 ------------------------VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAF 130
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M E +++F S LSAC+ G +VH + ++ +++ +G+ALI MY
Sbjct: 131 NLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMY 190
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG V ARRVFD M R+ VSW +L Y ++G A ++L+ + M+ G+ P +T
Sbjct: 191 AKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYM 250
Query: 257 SVVSACASLAAFKEGLQIHARL-------------------MRCEKLRN----------- 286
+V+SAC SLAA ++G QIHA++ ++C +++
Sbjct: 251 NVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR 310
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRM------PIR----------------------- 317
D++ N ++ G+L EA +F RM P R
Sbjct: 311 DVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIH 370
Query: 318 ------NVVSET----SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+VS+ ++++ Y+KA S+K AR +F +M +R+VVSW AL+ GY G+
Sbjct: 371 ARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVV 430
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
E+ F+ + ++ V T+ +L AC+N L+ G++ H VVK G+ +D+
Sbjct: 431 ESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIF------ADLA 484
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+L+ MY KCGSVED R+ E M RD V+WN +I G AQNG G EAL F+ M
Sbjct: 485 VANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEE 544
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+P+ T + V+ AC LVEEGR+ F+SM K++G+ P + HY CMVD+L RAG L EA
Sbjct: 545 MRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEA 604
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ +I MP +P A +WG+LLAAC+ H N+ +GE A++ L++EP N+G YV LS +YA
Sbjct: 605 EDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAA 664
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W +V ++RKLM++RGV K+PG SWIE+ G V+ F+ D+ HP +EIY L+ LT+++
Sbjct: 665 GMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQI 724
Query: 668 KRVGYVPN 675
K +GYVP+
Sbjct: 725 KSLGYVPD 732
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 227/426 (53%), Gaps = 40/426 (9%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+H + + Y + L +C + D +G QVH + + +VY+ + L+ +Y CG
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V+ ARR+FD +++VSWN +I+ Y G +A +F M G+EPD+ T S++SA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+S AA G ++H R+M L N+ +GNAL+ MYAKCG + +AR VFD M R+ VS
Sbjct: 155 CSSPAALNWGREVHVRVMEA-GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVS 213
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T++ YA+ +GY Q E+L + + +E V
Sbjct: 214 WTTLTGAYAE--------------------------SGYAQ-----ESLKTYHAMLQEGV 242
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P+ T+ N+L+AC +LA L+ G+Q H +V+ S SD+ V +L MY+KCG+
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVE------SEHHSDVRVSTALTKMYIKCGA 296
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V+D +FE + RD ++WN MI G +G EA G+F +ML PD VT + +L A
Sbjct: 297 VKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSA 356
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ G + G++ + K+ GL ++++ +AG + +A+ + + MP + D V
Sbjct: 357 CARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVV 414
Query: 562 IWGSLL 567
W +L+
Sbjct: 415 SWTALV 420
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/667 (38%), Positives = 385/667 (57%), Gaps = 43/667 (6%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK--CGCLY 71
L L +P L+ +C KS++ +++H++ I + S + ++I K G +
Sbjct: 14 LPSLPQTPPLSLIKTC---KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDME 70
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
AR VFD M N F WN+M+ G+++
Sbjct: 71 YARMVFDTMPGPNHFV-------------------------------WNNMIKGYSRVGC 99
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ A+ + +M EY++ L K G ++H + K +SS+V++ +A
Sbjct: 100 PNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNA 159
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LI +Y G VS AR VFD + ++V+WN +I+ Y ++ +++++F M + P
Sbjct: 160 LIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPS 219
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+TL SV+SAC+ L G ++H R ++ K+ VL NAL+DMYA CG ++ A +F
Sbjct: 220 SITLVSVLSACSKLKDLNVGKRVH-RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIF 278
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D M R+V+S T++V+G+ V AR F KM ER+ VSW A+I GY Q +E L
Sbjct: 279 DNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLS 338
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LFR ++ ++ P +T ++L ACA+L L+LG ++ K+ ++ D FVGN+
Sbjct: 339 LFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKI------DSFVGNA 392
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
LIDMY CG+VE RIF M RD +SW A+I G A NGYG EAL +F +ML PD
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPD 452
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT IGVLCAC+H+G+V++G+K+F+ M+ +HG+ P HY CMVDLLGRAG L EA +I
Sbjct: 453 EVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVI 512
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
+ MP++P++++WGSLL AC+VHR+ + E A+++LE+EP N YVLL N+YA RW
Sbjct: 513 KNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWE 572
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
++ VRKLM RG+ K PGCS IE+ G V+ F+ D+ HP +KEIY L ++ ++K G
Sbjct: 573 KLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAG 632
Query: 672 YVPNASD 678
Y P+ S+
Sbjct: 633 YSPDTSE 639
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/632 (38%), Positives = 374/632 (59%), Gaps = 8/632 (1%)
Query: 47 KSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASR 106
K F + ++ L+D++ +CG + A ++F ++ +F NS++ G K ID A
Sbjct: 166 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 225
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
F M ERD SWN M++ +Q R EALG V+MH + L ++ S+L+ACA
Sbjct: 226 YFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS 285
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
G Q+HA + +S D Y+ SALI++Y KCG A+RVF+ +++RN VSW LI
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q S ++E+F +M A + D+ LA+++S C + G Q+H+ ++ R
Sbjct: 346 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 405
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+V+ N+L+ +YAKCG L A VF M R++VS TSM++ Y++ ++ AR F M
Sbjct: 406 -IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMD 464
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGR 405
RN ++WNA++ Y Q+G E+ L ++ +L ++ V P T+ L CA++ +LG
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 524
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H VK GL ++ V N+ I MY KCG + + ++F+ + +D VSWNAMI
Sbjct: 525 QIIGHTVKAGLIL------NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G +Q+G G +A F ML G KPD+++ + VL CSH+GLV+EG+ YF M++ HG++
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +H++CMVDLLGRAG L EAK LI+ MPM+P A +WG+LL+ACK+H N L E AK
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 698
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+ E++ +SG Y+LL+ +Y++ G+ + +VRKLMR +G+ K PG SW+E+ V+VF
Sbjct: 699 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D HP I L L ++ +GYV S
Sbjct: 759 DDVSHPQVIAIRNKLDELMEKIAHLGYVRTES 790
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 182/641 (28%), Positives = 286/641 (44%), Gaps = 106/641 (16%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ A L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLR 63
Query: 79 -KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q RF + L
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 138 YFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV MH +L + ++F + +C ++ Q+ L K + D + +AL+DM+
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMF 183
Query: 197 GKCGRVSCARRV-------------------------------FDGMRERNIVSWNSLIT 225
+CG V A R+ F+ M ER++VSWN +I
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G +AL + V M G+ D T S ++ACA L + G Q+HA+++R +
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP-Q 302
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D + +AL+++YAKCG EA+ VF+ + RN
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRN--------------------------- 335
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
VSW LI G Q +++ LF ++ E + + L++ C N DL LGR
Sbjct: 336 ----SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 391
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG I V NSLI +Y KCG +++ +F +M ERD VSW +MI
Sbjct: 392 QLHSLCLK------SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + + +T +L A G E+G K +S+M + +
Sbjct: 446 AYSQIGNIIKAREFFDGM----DTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P + V L GC D + A K+ I+ A
Sbjct: 502 P---DWVTYVTLF--RGCAD---------------------IGANKLGDQIIGHTVKAGL 535
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+L + +N+ MY++ GR E ++ L+ + VV
Sbjct: 536 ILNVSVANAAI-----TMYSKCGRISEAQKLFDLLNGKDVV 571
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I+S + ++ + LI++YAKCG A++V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N +W +I G L Q++ FS+++
Sbjct: 328 FNSLQDRNSVSWTVLIGGSL-------------------------------QYECFSKSV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E A+ +++ + +S C +D +G Q+H+L KS ++ + + ++LI +Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYE---------------------------- 228
KCG + A VF M ER+IVSW S+IT Y
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLG 476
Query: 229 ---QNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Q+G D L+++ M++ + PD VT ++ CA + A K G QI ++ +
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
N + + NA + MY+KCG+++EA+ +FD + ++VVS +M++GY++ K A F
Sbjct: 537 LN-VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 595
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
ML + + +S+ A+++G + +G +E F ++ R + P F +C +
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF-----SC--MV 648
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 649 DL-LGRAGH 656
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L +D A L+ C + R++H+ +KS I + N LI +YAKCG
Sbjct: 361 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 420
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A VF MS +++ +W S+IT + G I A F M R+ +WN+M+ + Q
Sbjct: 421 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQ 480
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M S+ ++ ++ + CA K+G Q+ K+ +V
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 540
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A I MY KCGR+S A+++FD + +++VSWN++IT Y Q+G A + F M++ G
Sbjct: 541 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 600
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 308 RCVFDRMPIR 317
+ + D+MP++
Sbjct: 661 KDLIDKMPMK 670
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/632 (38%), Positives = 374/632 (59%), Gaps = 8/632 (1%)
Query: 47 KSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASR 106
K F + ++ L+D++ +CG + A ++F ++ +F NS++ G K ID A
Sbjct: 166 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 225
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
F M ERD SWN M++ +Q R EALG V+MH + L ++ S+L+ACA
Sbjct: 226 YFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS 285
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
G Q+HA + +S D Y+ SALI++Y KCG A+RVF+ +++RN VSW LI
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q S ++E+F +M A + D+ LA+++S C + G Q+H+ ++ R
Sbjct: 346 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 405
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+V+ N+L+ +YAKCG L A VF M R++VS TSM++ Y++ ++ AR F M
Sbjct: 406 -IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 464
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGR 405
RN ++WNA++ Y Q+G E+ L ++ +L ++ V P T+ L CA++ +LG
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 524
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H VK GL ++ V N+ I MY KCG + + ++F+ + +D VSWNAMI
Sbjct: 525 QIIGHTVKAGLIL------NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 578
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G +Q+G G +A F ML G KPD+++ + VL CSH+GLV+EG+ YF M++ HG++
Sbjct: 579 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 638
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +H++CMVDLLGRAG L EAK LI+ MPM+P A +WG+LL+ACK+H N L E AK
Sbjct: 639 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 698
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+ E++ +SG Y+LL+ +Y++ G+ + +VRKLMR +G+ K PG SW+E+ V+VF
Sbjct: 699 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 758
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D HP I + L ++ +GYV S
Sbjct: 759 DDVSHPQVIAIRNKMDELMEKIAHLGYVRTES 790
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 182/641 (28%), Positives = 285/641 (44%), Gaps = 106/641 (16%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ A L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 63
Query: 79 -KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q RF + L
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 138 YFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV MH +L + ++F + +C ++ Q+ L K + D + +AL+DM+
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMF 183
Query: 197 GKCGRVSCARRV-------------------------------FDGMRERNIVSWNSLIT 225
+CG V A R+ F+ M ER++VSWN +I
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G +AL + V M G+ D T S ++ACA L + G Q+HA+++R +
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP-Q 302
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D + +AL+++YAKCG EA+ VF+ + RN
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRN--------------------------- 335
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
VSW LI G Q +++ LF ++ E + + L++ C N DL LGR
Sbjct: 336 ----SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 391
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG I V NSLI +Y KCG +++ +F +M ERD VSW +MI
Sbjct: 392 QLHSLCLK------SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + +T +L A G E+G K +S+M + +
Sbjct: 446 AYSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P + V L GC D + A K+ I+ A
Sbjct: 502 P---DWVTYVTLF--RGCAD---------------------IGANKLGDQIIGHTVKAGL 535
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+L + +N+ MY++ GR E ++ L+ + VV
Sbjct: 536 ILNVSVANAAI-----TMYSKCGRISEAQKLFDLLNGKDVV 571
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I+S + ++ + LI++YAKCG A++V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N +W +I G L Q++ FS+++
Sbjct: 328 FNSLQDRNSVSWTVLIGGSL-------------------------------QYECFSKSV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E A+ +++ + +S C +D +G Q+H+L KS ++ + + ++LI +Y
Sbjct: 357 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYE---------------------------- 228
KCG + A VF M ER+IVSW S+IT Y
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 476
Query: 229 ---QNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Q+G D L+++ M++ + PD VT ++ CA + A K G QI ++ +
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
N + + NA + MY+KCG+++EA+ +FD + ++VVS +M++GY++ K A F
Sbjct: 537 LN-VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 595
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
ML + + +S+ A+++G + +G +E F ++ R + P F +C +
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF-----SC--MV 648
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 649 DL-LGRAGH 656
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L +D A L+ C + R++H+ +KS I + N LI +YAKCG
Sbjct: 361 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 420
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A VF MS +++ +W S+IT + G I A F M R+ +WN+M+ + Q
Sbjct: 421 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQ 480
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M S+ ++ ++ + CA K+G Q+ K+ +V
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 540
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A I MY KCGR+S A+++FD + +++VSWN++IT Y Q+G A + F M++ G
Sbjct: 541 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 600
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 308 RCVFDRMPIR 317
+ + D+MP++
Sbjct: 661 KDLIDKMPMK 670
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/679 (37%), Positives = 385/679 (56%), Gaps = 71/679 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ G + S +A L SC ++ + +H+ +KS F S+I + +D+YAKC
Sbjct: 271 KEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC 330
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G +M+ DA ++ +SMP+ S+N+++ G+A
Sbjct: 331 G----------RMA---------------------DAQKVLSSMPKCSLQSYNAIIVGYA 359
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ DR +AL F + E + AL+ACA G QVH L KS S++
Sbjct: 360 RSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC 419
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A++DMYGKC ++ A +FD M R+ VSWN++I EQNG + L F M+ S
Sbjct: 420 VANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR 479
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EPD+ T SV+ ACA A G++IH R+++ + D +G ALVDMY KCG + +A
Sbjct: 480 MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIK-SGMGFDSFVGAALVDMYCKCGMIEKA 538
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ DR ++ +VSWNA+I+G++ ++E
Sbjct: 539 DKIHDRTE-------------------------------QKTMVSWNAIISGFSLLQQSE 567
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+A F + V P ++T+ +L+ CANLA + LG+Q H ++K L +SD++
Sbjct: 568 DAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQEL------QSDVY 621
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ ++L+DMY KCG+++D +FE RD+V+WNAM+ G A +G G EAL LF+ M L
Sbjct: 622 ICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVN 681
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KP+H T + VL AC+H GLV++G YF M E+GL P +HY+CMVD+LGR+G +DEA
Sbjct: 682 VKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEA 741
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L++ MP + DAVIW +LL+ CK+H N+ + E + LL+++P +S VLLSN+YA+
Sbjct: 742 LNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADA 801
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G WG V +RK+MR + K+PGCSWIE+ V+ F+V DK HP ++EIY L +L EM
Sbjct: 802 GMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEM 861
Query: 668 KRVGYVPNASD--DEAYEE 684
+ VGY+P+ DE EE
Sbjct: 862 QSVGYIPDCDVLLDEEVEE 880
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 318/664 (47%), Gaps = 92/664 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C + S++ ++ HAR+I F F+ N L+ +Y KC L A KVFDKM
Sbjct: 52 FSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMY 111
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V ++NSII+G G +D A + F MPERD SWNS++SGF Q+ +++ F++
Sbjct: 112 LRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S L AC + MG QVH L+ K + DV GSAL+ MY KC R
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKR 231
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ + VF + E+N VSW+++I QN + LE+F M G+ + AS+ +
Sbjct: 232 LDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRS 291
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+L+A + G ++H+ ++ +D+++G A +DMYAKCG++ +A+ V MP ++ S
Sbjct: 292 CAALSALRLGKELHSHALK-SAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 322 ETSMVSGYAKA----SSVKSARLMFTKMLE------------------------------ 347
+++ GYA++ ++KS +L+ L
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 348 -----RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC-------------------- 382
N+ NA++ Y + EA LF +++R
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470
Query: 383 -----------PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
P +T+G++L ACA L G + HT ++K G+ F D FVG +
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGF------DSFVGAA 524
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KCG +E +I + ++ VSWNA+I G + +A F +ML G PD
Sbjct: 525 LVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPD 584
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKT 549
+ T VL C++ V G++ + + K+ + D Y C +VD+ + G + +++
Sbjct: 585 NFTYAAVLDTCANLATVGLGKQIHAQIIKQELQS---DVYICSTLVDMYSKCGNMQDSQL 641
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK-----KLLEIEPSNSGPYVLLSNMY 604
+ E P + D V W ++L H LGE K +L+ ++P N +V +
Sbjct: 642 MFEKAPNR-DFVTWNAMLCGYAHHG---LGEEALKLFESMQLVNVKP-NHATFVSVLRAC 696
Query: 605 AELG 608
A +G
Sbjct: 697 AHMG 700
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 218/460 (47%), Gaps = 83/460 (18%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ G Q HA + + ++ + L+ MY KC + A +VFD M
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 213 RERNIVSWNSLITCYE-------------------------------QNGPASDALEVFV 241
R++VS+NS+I+ Y QNG +++VF+
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M G+ D +LA V+ AC +L G+Q+H +++ D+V G+AL+ MYAKC
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKF-GFDCDVVTGSALLGMYAKC 229
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
+L+++ VF +P +N VSW+A+IAG
Sbjct: 230 KRLDDSLSVFSELPEKN-------------------------------WVSWSAMIAGCV 258
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QN N E L LF+ ++ V + + +L +CA L+ L+LG++ H+H +K S
Sbjct: 259 QNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALK------SA 312
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
SDI VG + +DMY KCG + D ++ +M + S+NA+IVG A++ G +AL F+
Sbjct: 313 FGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQ 372
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA--PLKDHYTC----MV 535
+L G D +T+ G L AC+ EGR+ HGLA + C ++
Sbjct: 373 LLLKTGLGFDEITLSGALNACASIRGDLEGRQV-------HGLAVKSISMSNICVANAIL 425
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
D+ G+ L EA L + M + DAV W +++AAC+ + N
Sbjct: 426 DMYGKCKALAEASDLFDMMERR-DAVSWNAIIAACEQNGN 464
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/632 (38%), Positives = 374/632 (59%), Gaps = 8/632 (1%)
Query: 47 KSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASR 106
K F + ++ L+D++ +CG + A ++F ++ +F NS++ G K ID A
Sbjct: 156 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 215
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
F M ERD SWN M++ +Q R EALG V+MH + L ++ S+L+ACA
Sbjct: 216 YFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS 275
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
G Q+HA + +S D Y+ SALI++Y KCG A+RVF+ +++RN VSW LI
Sbjct: 276 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 335
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q S ++E+F +M A + D+ LA+++S C + G Q+H+ ++ R
Sbjct: 336 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA 395
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+V+ N+L+ +YAKCG L A VF M R++VS TSM++ Y++ ++ AR F M
Sbjct: 396 -IVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMA 454
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGR 405
RN ++WNA++ Y Q+G E+ L ++ +L ++ V P T+ L CA++ +LG
Sbjct: 455 TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGD 514
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H VK GL ++ V N+ I MY KCG + + ++F+ + +D VSWNAMI
Sbjct: 515 QIIGHTVKAGLIL------NVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMIT 568
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G +Q+G G +A F ML G KPD+++ + VL CSH+GLV+EG+ YF M++ HG++
Sbjct: 569 GYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGIS 628
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +H++CMVDLLGRAG L EAK LI+ MPM+P A +WG+LL+ACK+H N L E AK
Sbjct: 629 PGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKH 688
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+ E++ +SG Y+LL+ +Y++ G+ + +VRKLMR +G+ K PG SW+E+ V+VF
Sbjct: 689 VFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKA 748
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D HP I + L ++ +GYV S
Sbjct: 749 DDVSHPQVIAIRNKMDELMEKIAHLGYVRTES 780
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 239/540 (44%), Gaps = 99/540 (18%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ A L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 20 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 79
Query: 79 -KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ NV T N ++ G K G + DA LF MP RD SWN+++S ++
Sbjct: 80 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSR--------- 130
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
GS +S C ++ Q+ L K + D + +AL+DM+
Sbjct: 131 ---------------PAGSWMS-CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFV 174
Query: 198 KCGRVSCARRV-------------------------------FDGMRERNIVSWNSLITC 226
+CG V A R+ F+ M ER++VSWN +I
Sbjct: 175 RCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAA 234
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q+G +AL + V M G+ D T S ++ACA L + G Q+HA+++R +
Sbjct: 235 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLP-QI 293
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D + +AL+++YAKCG EA+ VF+ + RN
Sbjct: 294 DPYVASALIELYAKCGSFKEAKRVFNSLQDRN---------------------------- 325
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
VSW LI G Q +++ LF ++ E + + L++ C N DL LGRQ
Sbjct: 326 ---SVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQ 382
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H+ +K SG I V NSLI +Y KCG +++ +F +M ERD VSW +MI
Sbjct: 383 LHSLCLK------SGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITA 436
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+Q G +A F M + +T +L A G E+G K +S+M + + P
Sbjct: 437 YSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 492
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 213/429 (49%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I+S + ++ + LI++YAKCG A++V
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N +W +I G L Q++ FS+++
Sbjct: 318 FNSLQDRNSVSWTVLIGGSL-------------------------------QYECFSKSV 346
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E A+ +++ + +S C +D +G Q+H+L KS ++ + + ++LI +Y
Sbjct: 347 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 406
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYE---------------------------- 228
KCG + A VF M ER+IVSW S+IT Y
Sbjct: 407 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 466
Query: 229 ---QNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Q+G D L+++ M++ + PD VT ++ CA + A K G QI ++ +
Sbjct: 467 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 526
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
N + + NA + MY+KCG+++EA+ +FD + ++VVS +M++GY++ K A F
Sbjct: 527 LN-VSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD 585
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
ML + + +S+ A+++G + +G +E F ++ R + P F +C +
Sbjct: 586 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHF-----SC--MV 638
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 639 DL-LGRAGH 646
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L +D A L+ C + R++H+ +KS I + N LI +YAKCG
Sbjct: 351 QMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCG 410
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A VF MS +++ +W S+IT + G I A F M R+ +WN+M+ + Q
Sbjct: 411 DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQ 470
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M S+ ++ ++ + CA K+G Q+ K+ +V
Sbjct: 471 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVS 530
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A I MY KCGR+S A+++FD + +++VSWN++IT Y Q+G A + F M++ G
Sbjct: 531 VANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG 590
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 591 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 650
Query: 308 RCVFDRMPIR 317
+ + D+MP++
Sbjct: 651 KDLIDKMPMK 660
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 208/433 (48%), Gaps = 18/433 (4%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG- 211
+ AL +C +H L +S V++ + L+ Y CG +S ARR+
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE------PDEVTLASVVSACASL 265
++E N+++ N ++ Y + G SDA E+F RM + D A +C +L
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ Q+ + + D + ALVDM+ +CG ++ A +F ++ + SM
Sbjct: 142 GCRELAPQLLGLFWKFD-FWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 200
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
++GYAK + A F M ER+VVSWN +IA +Q+G EALGL + R+ V
Sbjct: 201 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 260
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T+ + L ACA L L G+Q H V++ S + D +V ++LI++Y KCGS ++
Sbjct: 261 TTYTSSLTACARLFSLGWGKQLHAKVIR------SLPQIDPYVASALIELYAKCGSFKEA 314
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
R+F ++ +R+ VSW +I G Q ++++ LF +M D + ++ C +
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 374
Query: 506 GLVEEGRKYFS-SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+ GR+ S + H A + + ++ L + G L A+ + +M + D V W
Sbjct: 375 MDLCLGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCGDLQNAEFVFSSMS-ERDIVSWT 431
Query: 565 SLLAACKVHRNIM 577
S++ A NI+
Sbjct: 432 SMITAYSQIGNII 444
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/670 (37%), Positives = 377/670 (56%), Gaps = 71/670 (10%)
Query: 41 VHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
VH I+K+ A F+ N L+ YAK G L AR+VFD+M + N+FT N++++ L
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG-YFVKMHSENFALSEYSFGSAL 158
+ D RLFASMPERD S+N++++GF+ + ++ Y + E+ + + + +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR----- 213
+ D +G VH + + + + ++GS L+DMY K G + ARRVF M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 214 --------------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+R+ ++W +++T QNG +AL+VF RM A G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ D+ T S+++AC +LAA +EG QIHA + R +++ +G+ALVDMY+KC
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTW-YEDNVFVGSALVDMYSKC------ 326
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
S++ A +F +M RN++SW A+I GY QN +E
Sbjct: 327 -------------------------RSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ F ++ + + P +T G+++++CANLA L+ G Q H L +SG I
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC------LALVSGLMRYIT 415
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+L+ +Y KCGS+ED R+F+ M D VSW A++ G AQ G E + LF+KML G
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG 475
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KPD VT IGVL ACS AGLVE+G YF SM K+HG+ P+ DHYTCM+DL R+G EA
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ I+ MP PDA W +LL++C++ N+ +G++ A+ LLE +P N YVLL +M+A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W EV +R+ MR R V K+PGCSWI+ V++F D+ HP + IY L+ L +M
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 668 KRVGYVPNAS 677
GY P+ S
Sbjct: 656 AEEGYKPDVS 665
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ + +++HA I ++ + +F+ + L+D+Y+KC + A V
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+ +N+ +W +M+ G+ Q+ EA+
Sbjct: 336 FRRMTCRNIISW-------------------------------TAMIVGYGQNACSEEAV 364
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + +++ GS +S+CA + G Q H L S + + +AL+ +Y
Sbjct: 365 RAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLY 424
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L+T Y Q G A + +++F +M+A+G++PD VT
Sbjct: 425 GKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFI 484
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ ++G + + + ++D+Y++ G+ EA +MP
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/711 (35%), Positives = 394/711 (55%), Gaps = 93/711 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D + FA +L SC + ++H +K F ++ + L+D+YAKC L
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKL------ 225
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D + + F SMPE++ SW+++++G Q+D L
Sbjct: 226 -------------------------DCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +S+ +F S +CAG ++G+Q+H K+ + +DV +G+A +DMY
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC +S A+++F+ + N+ S+N++I Y ++ G+ DEV+L+
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KGLGLDEVSLS 366
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
ACA + EGLQ+H M+ ++++ + NA++DMY KCG L EA VF+ M
Sbjct: 367 GAFRACAVIKGDLEGLQVHGLSMK-SLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 425
Query: 317 RNVVSETSMVSG-------------------------------------YAKASSVKSAR 339
R+ VS ++++ Y+K ++ A
Sbjct: 426 RDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 485
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+ ++ E+ VVSWNA+I+G++ ++EEA F + V P ++T+ +L+ CANL
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
++LG+Q H ++K L +SD ++ ++L+DMY KCG+++D IFE RD+V+
Sbjct: 546 TVELGKQIHAQIIKKEL------QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVT 599
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNAM+ G AQ+G G EAL +F+ M L KP+H T + VL AC H GLVE+G YF SM
Sbjct: 600 WNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSML 659
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+GL P +HY+C+VD++GR+G + +A LIE MP + DAVIW +LL+ CK+H N+ +
Sbjct: 660 SNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVA 719
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E A +L++EP +S YVLLSN+YA G W EV ++RK+MR G+ K+PGCSWIEI
Sbjct: 720 EKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSE 779
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA----SDDEAYEEQN 686
V+ F+V DK HP +KEIY L +LT EMK VGY+P+ +DDE QN
Sbjct: 780 VHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDELRSLQN 830
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 297/608 (48%), Gaps = 55/608 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C K++ ++ HAR+I ++F +F+ N LI +Y KC L A KVFD M
Sbjct: 45 FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ +WN+++ G G I A +LF +MPERD SWNS++SG+ + + + F++
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +F L +C+ D G Q+H L K + DV GSAL+DMY KC +
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ C+ + F M E+N VSW+++I QN LE+F M +G+ + T ASV +
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L+A + G Q+H ++ + D+V+G A +DMY KC L++A+ +F+ +P N+ S
Sbjct: 285 CAGLSALRLGSQLHGHALKTD-FGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 322 ETSMVSGYAKASS-------------------------VKSARLMFTKMLERNVVSWNAL 356
+++ GYA++ ++ L + + N+ NA+
Sbjct: 344 YNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAI 403
Query: 357 IAGYTQNGENEEALGLF-RLLKRESV-----CPTHYTFGNLLNACANLADLQLGRQAHTH 410
+ Y + G EA +F ++ R++V H GN + L H
Sbjct: 404 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN--------EEKTLSLFIHNR 455
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++K L D FVG +LIDMY KCG +E ++ + + E+ VSWNA+I G +
Sbjct: 456 IIKSRLGL------DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 509
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
EA F KML G PD+ T +L C++ VE G++ + + K+ + D
Sbjct: 510 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS---DA 566
Query: 531 Y--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
Y + +VD+ + G + + + + E P + D V W +++ H LGE K
Sbjct: 567 YISSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG---LGEEALKIFEY 622
Query: 589 IEPSNSGP 596
++ N P
Sbjct: 623 MQLENVKP 630
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 240/525 (45%), Gaps = 105/525 (20%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ G Q HA + + + V++ + LI MY KC + A +VFDGM
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 213 RER-------------------------------NIVSWNSLITCYEQNGPASDALEVFV 241
+R ++VSWNSLI+ Y NG ++VF+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M G D T A V+ +C+SL G+QIH ++ D+V G+AL+DMYAKC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM-GFDCDVVTGSALLDMYAKC 222
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
KL+ + F MP +N VS W+A+IAG
Sbjct: 223 KKLDCSIQFFHSMPEKNWVS-------------------------------WSAIIAGCV 251
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QN + L LF+ +++ V + TF ++ +CA L+ L+LG Q H H +K
Sbjct: 252 QNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG---- 307
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D+ +G + +DMYMKC ++ D ++F ++ + S+NA+IVG A++ G LGL
Sbjct: 308 --TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKG---LGL-- 360
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA--PLKDHYTC----MV 535
D V++ G AC+ EG + HGL+ L C ++
Sbjct: 361 ---------DEVSLSGAFRACAVIKGDLEGLQV-------HGLSMKSLCQSNICVANAIL 404
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN--IMLGEYVAKKLLEIEPS- 592
D+ G+ G L EA + E M + DAV W +++AA + + N L ++ ++++
Sbjct: 405 DMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGL 463
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
+S + L +MY++ G + ++ + ++ VV SW I+
Sbjct: 464 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVV-----SWNAII 503
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/687 (37%), Positives = 380/687 (55%), Gaps = 73/687 (10%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+I ++ F SP + LL +C + ++H+ + K+ +S+ ++ L+D+Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KCG + A +F+ NV W N M+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLW-------------------------------NLMLV 318
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
F Q + +++ F +M + +++++ L C + + +G Q+H+L K+ + S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D+Y+ LIDMY K G + ARRV + ++E+++VSW S+I Y Q+ DAL F M
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQ 438
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI PD + LAS +S CA + A ++GLQIHAR+ D+ + NALV++YA+CG++
Sbjct: 439 KCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY-VSGYSGDVSIWNALVNLYARCGRI 497
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
EA F+ M + ++ ++ N L++G+ Q+G
Sbjct: 498 REAFSSFEEMEL-------------------------------KDGITGNGLVSGFAQSG 526
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EEAL +F + + V +TF + L+A ANLA+++ G+Q H V+K G F
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSF------ 580
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ VGN+LI +Y KCGS ED F M ER+ VSWN +I C+Q+G G EAL LF +M
Sbjct: 581 ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMK 640
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G KP+ VT IGVL ACSH GLVEEG YF SMS E+G+ P DHY C++D+ GRAG L
Sbjct: 641 KEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQL 700
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
D AK IE MP+ DA++W +LL+ACKVH+NI +GE+ AK LLE+EP +S YVLLSN Y
Sbjct: 701 DRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAY 760
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A +W +VRK+MR RGV K+PG SWIE+ V+ F V D+ HPL ++IY L ++
Sbjct: 761 AVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVIN 820
Query: 665 REMKRVGYVPNASDDEAYEEQNGSNST 691
+ +VGY +EQ G + T
Sbjct: 821 DRVAKVGYKQEKYHLFHDKEQEGRDPT 847
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 257/534 (48%), Gaps = 81/534 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA+ + + N LID+Y+K G + AR+VF++
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE--------------------- 102
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ RD SW +M+SG+AQ+ EALG + +MH + Y S LS+
Sbjct: 103 ----------LSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + F G +HA K + S++++G+A+I +Y +CG A RVF M R+ V++
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTF 212
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q G ALE+F M SG+ PD VT++S+++ACASL ++G Q+H+ L +
Sbjct: 213 NTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK 272
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +D ++ +L+D+Y KCG V++A +
Sbjct: 273 A-GISSDYIMEGSLLDLYVKCG-------------------------------DVETALV 300
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F NVV WN ++ + Q + ++ LF ++ + P +T+ +L C +
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ LG Q H+ VK G ESD++V LIDMY K G +E R+ E + E+D VSW
Sbjct: 361 IDLGEQIHSLSVKTGF------ESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSW 414
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-----HAGLVEEGRKYF 515
+MI G Q+ +AL FK+M CG PD++ + + C+ GL R Y
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S S + + + +V+L R G + EA + E M ++ D + L++
Sbjct: 475 SGYSGDVSI------WNALVNLYARCGRIREAFSSFEEMELK-DGITGNGLVSG 521
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 226/466 (48%), Gaps = 45/466 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS-VDFKM 169
M R S ++GF H+ ++ L F ++ L F AL AC G+ +++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
++HA +G+ LID+Y K G V ARRVF+ + R+ VSW ++++ Y Q
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG +AL ++ +M +G+ P L+SV+S+C F +G IHA+ + +++
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSEIF 179
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNA++ +Y +CG A VF MP R+ V+ +++SG+A
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHA------------------- 220
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
Q G E AL +F ++ + P T +LL ACA+L DLQ G Q H+
Sbjct: 221 ------------QCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K G+ SD + SL+D+Y+KCG VE IF + + V WN M+V Q
Sbjct: 269 YLFKAGI------SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ LF +M G +P+ T +L C+ ++ G + S+S + G D
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ-IHSLSVKTGFE--SD 379
Query: 530 HYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y ++D+ + G L++A+ ++E M + D V W S++A H
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQH 424
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M R S +AG+ + + + L LF R+ H G L ACA A G
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQ-----HGGLGPLDFACALRACRGNG 55
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R+ H G VGN LID+Y K G V R+FE + RD VSW AM+
Sbjct: 56 RRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAML 115
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQNG G EALGL+++M G P + VL +C+ A L +GR + +HG
Sbjct: 116 SGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGR-LIHAQGYKHGF 174
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
++ L R G A+ + MP + D V + +L++ H GE+ +
Sbjct: 175 CSEIFVGNAVITLYLRCGSFRLAERVFCDMPHR-DTVTFNTLISG---HAQCGHGEHALE 230
Query: 585 KLLEIEPSNSGP-YVLLSNMYAELGRWGEVVRVRKL 619
E++ S P V +S++ A G++ + +L
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/667 (37%), Positives = 387/667 (58%), Gaps = 47/667 (7%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGA 73
+ + P L+D C +K + +++HA+++++ + F +RLI A L A
Sbjct: 32 YFANHPTLSLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYA 88
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
++VFD++ + N++TWN++I R +AS Q
Sbjct: 89 QQVFDQIPHPNLYTWNTLI-------------RAYASSSNPHQ----------------- 118
Query: 134 EALGYFVKM--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+L F++M S +F +++F + A + + G H ++ K SDV++ ++
Sbjct: 119 -SLLIFLRMLHQSPDFP-DKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNS 176
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LI Y KCG + RVF + R++VSWNS+IT + Q G +ALE+F M ++P+
Sbjct: 177 LIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+T+ V+SACA + F+ G +H+ + R ++ L L NA++DMY KCG + +A+ +F
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIER-NRIGESLTLSNAMLDMYTKCGSVEDAKRLF 295
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D+MP +++VS T+M+ GYAK +A+ +F M +++ +WNALI+ Y Q G+ +EAL
Sbjct: 296 DKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALE 355
Query: 372 LFRLLK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF L+ ++ P T + L+ACA L + LG H ++ K G++ + +
Sbjct: 356 LFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKL------NCHLTT 409
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLIDMY KCG ++ +F ++ +D W+AMI G A +G+G +A+ LF KM KP
Sbjct: 410 SLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP 469
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ VT +LCACSH GLVEEGR +F+ M +G+ P HY CMVD+LGRAG L+EA L
Sbjct: 470 NAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL 529
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MPM P A +WG+LL AC +H N++L E +L+E+EP N G YVLLSN+YA+ G+W
Sbjct: 530 IEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKW 589
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
V +RKLMR G+ K+PGCS IE+ G V+ F+V D HP K+IY L + ++ +
Sbjct: 590 DRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETI 649
Query: 671 GYVPNAS 677
GYVPN S
Sbjct: 650 GYVPNKS 656
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/644 (35%), Positives = 386/644 (59%), Gaps = 38/644 (5%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+ R +H ++++ S+I + + L+D+Y+KCG
Sbjct: 393 IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCG-------------------------- 426
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-FALSEYS 153
+++A ++F S+ ER++ S+N++++G+ Q + EAL + M SE+ +++
Sbjct: 427 -----MVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F + L+ CA + G Q+HA L ++ + ++ + + L+ MY +CGR++ A+ +F+ M
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
ERN SWNS+I Y+QNG +AL +F +M +GI+PD +L+S++S+C SL+ ++G +
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 601
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H ++R + + +L LVDMYAKCG ++ A V+D+ ++V+ MVS + +
Sbjct: 602 LHNFIVR-NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A+ +F +M +RN WN+++AGY G +E+ F + + T ++N
Sbjct: 661 RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
C++L L+ G Q H+ ++K G S + + +L+DMY KCG++ +F+ M
Sbjct: 721 LCSSLPALEHGDQLHSLIIKKGFVNCS-----VVLETALVDMYSKCGAITKARTVFDNMN 775
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++ VSWNAMI G +++G EAL L+++M G P+ VT + +L ACSH GLVEEG +
Sbjct: 776 GKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLR 835
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
F+SM +++ + +HYTCMVDLLGRAG L++AK +E MP++P+ WG+LL AC+VH
Sbjct: 836 IFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 895
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+++ +G A++L E++P N GPYV++SN+YA GRW EV +R++M+ +GV K PG SW
Sbjct: 896 KDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSW 955
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
IEI + +F K HP +EIY L+ LT + K +GY+P+ S
Sbjct: 956 IEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTS 999
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 177/588 (30%), Positives = 290/588 (49%), Gaps = 102/588 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ FA L C +S ++VH+++I F + F+ N LID+YAKC KVF
Sbjct: 275 DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVF 334
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M +N TWNSII+ ++G +DA LF M E SG+ + +RF
Sbjct: 335 DEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE----------SGY-KSNRF----- 378
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ GS L A AG D G ++H L ++ +SD+ +GSAL+DMY
Sbjct: 379 ---------------NLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLA 256
KCG V A +VF + ERN VS+N+L+ Y Q G A +ALE++ M + GI+PD+ T
Sbjct: 424 KCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFT 483
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++++ CA+ +G QIHA L+R +N +++ LV MY++CG+LN A+ +F+RM
Sbjct: 484 TLLTLCANQRNDNQGRQIHAHLIRANITKN-IIVETELVHMYSECGRLNYAKEIFNRMAE 542
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN S SM+ G Y QNGE +EAL LF+ +
Sbjct: 543 RNAYSWNSMIEG-------------------------------YQQNGETQEALRLFKQM 571
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P ++ ++L++C +L+D Q GR+ H +V++ + E + + L+DMY
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTM------EEEGILQVVLVDMY 625
Query: 437 MKCGSVE-------------------------------DGCRIFETMVERDWVSWNAMIV 465
KCGS++ D +F+ M +R+ WN+++
Sbjct: 626 AKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILA 685
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G A G E+ F +ML + D +TM+ ++ CS +E G + S + K+ +
Sbjct: 686 GYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVN 745
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
T +VD+ + G + +A+T+ + M + + V W ++++ H
Sbjct: 746 CSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKH 792
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 264/552 (47%), Gaps = 79/552 (14%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
M R ++ G F D F ++ +C+ + + R++ + ++K+ +F+ L
Sbjct: 157 MEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGAL 216
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+D YA+ +G++DDA + +WN
Sbjct: 217 VDGYAR-------------------------------FGWMDDAVTSLDEIEGTSVVTWN 245
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
++++G+ + + EA G F +M ++F SAL C G QVH+ L
Sbjct: 246 AVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIAC 305
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ D ++G+ALIDMY KC +VFD M ERN V+WNS+I+ Q G +DAL +F
Sbjct: 306 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+RM SG + + L S++ A A LA +G ++H L+R L +D++LG+ALVDMY+K
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVR-NLLNSDIILGSALVDMYSK 424
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG + EA VF + RN VS ++ +AGY
Sbjct: 425 CGMVEEAHQVFRSLLERNEVSYNAL-------------------------------LAGY 453
Query: 361 TQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q G+ EEAL L+ ++ E + P +TF LL CAN + GRQ H H+++ +
Sbjct: 454 VQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI--- 510
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+I V L+ MY +CG + IF M ER+ SWN+MI G QNG EAL L
Sbjct: 511 ---TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 567
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK----EHGLAPLKDHYTCMV 535
FK+M L G KPD ++ +L +C ++GR+ + + + E G+ + +V
Sbjct: 568 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV-----VLV 622
Query: 536 DLLGRAGCLDEA 547
D+ + G +D A
Sbjct: 623 DMYAKCGSMDYA 634
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 272/552 (49%), Gaps = 77/552 (13%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P++ L+ C+ S S + +H ++I + + + ++ +++ +YA+ GCL
Sbjct: 73 PYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL---------- 122
Query: 81 SNKNVFTWNSIITGLLKWGFIDD---ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DD A +LF MPER+ +WN+M+ +A+ D + E L
Sbjct: 123 ---------------------DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLR 161
Query: 138 YFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ +M S NF+ +++F S + AC D Q+ + + K+ + ++++G AL+D Y
Sbjct: 162 LYGRMRGSGNFS-DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGY 220
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ G + A D + ++V+WN++I Y + +A +F RM+ G+ PD T A
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S + C +L + G Q+H++L+ C + D +GNAL+DMYAKC VFD M
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIAC-GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE 339
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN V+ S++S A+ A ++F +M E +GY N
Sbjct: 340 RNQVTWNSIISAEAQFGHFNDALVLFLRMQE----------SGYKSN------------- 376
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ G++L A A LAD+ GR+ H H+V++ L SDI +G++L+DMY
Sbjct: 377 --------RFNLGSILMASAGLADIGKGRELHGHLVRNLLN------SDIILGSALVDMY 422
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTM 495
KCG VE+ ++F +++ER+ VS+NA++ G Q G EAL L+ M G +PD T
Sbjct: 423 SKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF 482
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L C++ +GR+ + + + + + T +V + G L+ AK + M
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE-TELVHMYSECGRLNYAKEIFNRMA 541
Query: 556 MQPDAVIWGSLL 567
+ +A W S++
Sbjct: 542 -ERNAYSWNSMI 552
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 167/305 (54%), Gaps = 1/305 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L SC+ R +H I+++ E +Q L+D+YAKCG + A KV+
Sbjct: 579 DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 638
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ K+V N +++ + G +DA LF M +R+ WNS+++G+A E+
Sbjct: 639 DQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFN 698
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMY 196
+F++M + + + ++ C+ + G Q+H+L+ K + + V + +AL+DMY
Sbjct: 699 HFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMY 758
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG ++ AR VFD M +NIVSWN++I+ Y ++G + +AL ++ M G+ P+EVT
Sbjct: 759 SKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFL 818
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++SAC+ +EGL+I + + +VD+ + G+L +A+ ++MPI
Sbjct: 819 AILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPI 878
Query: 317 RNVVS 321
VS
Sbjct: 879 EPEVS 883
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 383/659 (58%), Gaps = 42/659 (6%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D+ D + + +C S ++HA +IK ++ IQN L+D+Y KCG +
Sbjct: 136 DIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITL 195
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A VF + + ++F WNS+I G + +A +F MPERD SWN+++S F+Q+
Sbjct: 196 AETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHG 255
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
L FV+M + F + ++GS LSACA D K G +HA + + +S D ++GS L
Sbjct: 256 IRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGL 315
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
IDMY KCG ++ ARRVF+ + E+N VSW LI+ Q G DAL +F +M + + DE
Sbjct: 316 IDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDE 375
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
TLA+++ C+ G +H ++ + + + +GNA++ MYA+CG +A F
Sbjct: 376 FTLATILGVCSGQNYAATGELLHGYAIK-SGMDSFVPVGNAIITMYARCGDTEKASLAFR 434
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
MP+R+ +S T+M++ +++ + AR F M ERNV++WN++++ Y Q+G +EE + L
Sbjct: 435 SMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKL 494
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ L++ ++V P TF + ACA+LA ++LG Q +HV K GL SD+ V NS+
Sbjct: 495 YVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGL------SSDVSVANSI 548
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+ MY +CG +++ ++F+++ ++ +SWNAM+ AQNG G +A+ ++ ML KPDH
Sbjct: 549 VTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDH 608
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
++ + VL DLLGRAG LD+AK LI+
Sbjct: 609 ISYVAVLS-----------------------------------DLLGRAGLLDQAKNLID 633
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP +P+A +WG+LL AC++H + +L E AKKL+E+ +SG YVLL+N+YAE G
Sbjct: 634 GMPFKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELEN 693
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
V +RKLM+ +G+ K PGCSWIE+ V+VF V + HP E+Y+ L+ + ++++ G
Sbjct: 694 VADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTG 752
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/671 (27%), Positives = 307/671 (45%), Gaps = 116/671 (17%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R++HA++I S + +F+ N L+ +Y+ CG + A +VF + ++ N+FTWN+++
Sbjct: 24 RKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDS 83
Query: 99 GFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSE---Y 152
G + +A LF MP RD SW +M+SG+ Q+ + ++ F+ M N + +
Sbjct: 84 GRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPF 143
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR------ 206
S+ + AC + Q+HA + K + + ++L+DMY KCG ++ A
Sbjct: 144 SYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNI 203
Query: 207 -------------------------RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
VF M ER+ VSWN+LI+ + Q G L FV
Sbjct: 204 ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFV 263
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M G +P+ +T SV+SACAS++ K G +HAR++R E D LG+ L+DMYAKC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEH-SLDAFLGSGLIDMYAKC 322
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G L AR VF+ + +N VS T ++SG A
Sbjct: 323 GCLALARRVFNSLGEQNQVSWTCLISGVA------------------------------- 351
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q G ++AL LF +++ SV +T +L C+ G H + +K SG
Sbjct: 352 QFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIK------SG 405
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN----------- 470
+S + VGN++I MY +CG E F +M RD +SW AMI +QN
Sbjct: 406 MDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFD 465
Query: 471 --------------------GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
G+ E + L+ M KPD VT + AC+ ++
Sbjct: 466 MMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKL 525
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G + S ++K GL+ +V + R G + EA+ + +++ ++ + + W +++AA
Sbjct: 526 GTQVVSHVTK-FGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWNAMMAAF 583
Query: 571 KVH--RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+ N + Y E +P + +LS++ LGR G + + + L+ G+ +
Sbjct: 584 AQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL---LGRAGLLDQAKNLI--DGMPFK 638
Query: 629 PGCS-WIEILG 638
P + W +LG
Sbjct: 639 PNATVWGALLG 649
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 372/637 (58%), Gaps = 69/637 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ VH+RI+ + S+ + L+ +YAKCG R+VF+K+ N
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN---------------- 290
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
RD +WN+M+ G A+ + EA + +M E ++ ++ L
Sbjct: 291 ---------------RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILL 335
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+AC S G ++H+ ++K+ ++SD+ + +ALI MY +CG + AR VFD M ++++
Sbjct: 336 NACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVI 395
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW ++I ++G ++AL V+ M +G+EP+ VT S+++AC+S AA + G +IH ++
Sbjct: 396 SWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV 455
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ L D +GN LV+MY+ CG SVK A
Sbjct: 456 VEA-GLATDAHVGNTLVNMYSMCG-------------------------------SVKDA 483
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F +M++R++V++NA+I GY + +EAL LF L+ E + P T+ N+LNACAN
Sbjct: 484 RQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 543
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L+ R+ HT V K G SD VGN+L+ Y KCGS D +FE M +R+ +
Sbjct: 544 GSLEWAREIHTLVRKGGFF------SDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVI 597
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I G AQ+G G +AL LF++M + G KPD VT + +L ACSHAGL+EEGR+YF SM
Sbjct: 598 SWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 657
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
S++ + P +HY CMVDLLGRAG LDEA+ LI+ MP Q + IWG+LL AC++H N+ +
Sbjct: 658 SQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPV 717
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E A+ L+++ N+ YV LS+MYA G W ++RKLM +RGV K+PG SWI++
Sbjct: 718 AERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGD 777
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++ F+ +D+ HP +++IY L LT MK GYVP+
Sbjct: 778 KLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPD 814
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 183/614 (29%), Positives = 298/614 (48%), Gaps = 76/614 (12%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A ++SS + K+L C+ K + R+VH II+ + + + N LI++Y +CG + AR
Sbjct: 19 AQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEAR 78
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+V+ K+S ER SWN+MV G+ Q+ +
Sbjct: 79 QVWKKLS-----------------------------YMERTVHSWNAMVVGYIQYGYIEK 109
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL +M A + S LS+C + G ++H ++ DV + + +++
Sbjct: 110 ALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILN 169
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG + AR VFD M ++++VSW I Y G + A E+F +M G+ P+ +T
Sbjct: 170 MYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRIT 229
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
SV++A +S AA K G +H+R++ +D +G ALV MYAKCG + R VF+++
Sbjct: 230 YISVLNAFSSPAALKWGKAVHSRILNAGH-ESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R++++ +M+ G A + G EEA ++
Sbjct: 289 VNRDLIAWNTMIGGLA-------------------------------EGGYWEEASEVYN 317
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++RE V P T+ LLNAC N A L G++ H+ V K G SDI V N+LI
Sbjct: 318 QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF------TSDIGVQNALIS 371
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY +CGS++D +F+ MV +D +SW AMI G A++G+G EAL ++++M G +P+ VT
Sbjct: 372 MYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVT 431
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+L ACS +E GR+ + E GLA +V++ G + +A+ + + M
Sbjct: 432 YTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP----YVLLSNMYAELGRW 610
+Q D V + +++ H LG+ K ++ P Y+ + N A G
Sbjct: 491 -IQRDIVAYNAMIGGYAAHN---LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 611 GEVVRVRKLMRKRG 624
+ L+RK G
Sbjct: 547 EWAREIHTLVRKGG 560
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 232/457 (50%), Gaps = 81/457 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL++C+ S ++ + +H+R+ K+ F S+I +QN LI +Y++CG + AR VFDKM
Sbjct: 331 YVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMV 390
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V +W ++I GL K GF +EAL + +
Sbjct: 391 RKDVISWTAMIGGLAKSGF-------------------------------GAEALTVYQE 419
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++ S L+AC+ + G ++H + ++ ++D ++G+ L++MY CG
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS 479
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR+VFD M +R+IV++N++I Y + +AL++F R+ G++PD+VT ++++A
Sbjct: 480 VKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 539
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+ + + +IH L+R +D +GNALV YAKCG ++A VF++M RNV+S
Sbjct: 540 CANSGSLEWAREIHT-LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS 598
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
WNA+I G Q+G ++AL LF +K E V
Sbjct: 599 -------------------------------WNAIIGGSAQHGRGQDALQLFERMKMEGV 627
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDM 435
P TF +LL+AC +H +++ G R+ D + + ++D+
Sbjct: 628 KPDIVTFVSLLSAC-----------SHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDL 676
Query: 436 YMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G +++ + +TM + + W A++ C +G
Sbjct: 677 LGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHG 713
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
E + A+ + + L+++ + +L C + DL GRQ H H+++H R +
Sbjct: 3 EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQH--RTV----P 56
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETM--VERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D + N+LI+MY++CGS+E+ ++++ + +ER SWNAM+VG Q GY +AL L ++
Sbjct: 57 DQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQ 116
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRK-YFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
M G PD T++ L +C G +E GR+ +F +M + GL C++++ +
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM--QAGLLFDVKVANCILNMYAKC 174
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
G ++EA+ + + M + V W + R+ E K E N Y+ +
Sbjct: 175 GSIEEAREVFDKME-KKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISV 233
Query: 601 SNMYAELG--RWGEVVRVRKL 619
N ++ +WG+ V R L
Sbjct: 234 LNAFSSPAALKWGKAVHSRIL 254
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L++C S S+ R +H + K F S+ + N L+ YAKCG A VF
Sbjct: 529 DKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVF 588
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+KM+ +NV +WN+II G + G DA +LF M + D ++ S++S +
Sbjct: 589 EKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLE 648
Query: 134 EALGYFVKMHSENFA----LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
E YF M S++FA + Y L AG +D + AL+ + ++ +
Sbjct: 649 EGRRYFCSM-SQDFAIIPTIEHYGCMVDLLGRAGQLD-----EAEALIKTMPFQANTRIW 702
Query: 190 SALIDMYGKCGRVSCARR 207
AL+ G V A R
Sbjct: 703 GALLGACRIHGNVPVAER 720
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/670 (37%), Positives = 377/670 (56%), Gaps = 71/670 (10%)
Query: 41 VHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
VH I+K+ A F+ N L+ YAK G L AR+VFD+M + N+FT N++++ L
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG-YFVKMHSENFALSEYSFGSAL 158
+ D RLFASMPERD S+N++++GF+ + ++ Y + E+ + + + +
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR----- 213
+ D +G VH + + + + ++GS L+DMY K G + ARRVF M
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 214 --------------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+R+ ++W +++T QNG +AL+VF RM A G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ D+ T S+++AC +LAA +EG QIHA + R +++ +G+ALVDMY+KC
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTW-YEDNVFVGSALVDMYSKC------ 326
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
S++ A +F +M RN++SW A+I GY QN +E
Sbjct: 327 -------------------------RSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ F ++ + + P +T G+++++CANLA L+ G Q H L +SG I
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC------LALVSGLMRYIT 415
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+L+ +Y KCGS+ED R+F+ M D VSW A++ G AQ G E + LF+KML+ G
Sbjct: 416 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNG 475
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KPD VT IGVL ACS AGLVE+G YF SM K+H + P+ DHYTCM+DL R+G EA
Sbjct: 476 LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEA 535
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ I+ MP PDA W +LL++C++ N+ +G++ A+ LLE +P N YVLL +M+A
Sbjct: 536 EEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAK 595
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W EV +R+ MR R V K+PGCSWI+ V++F D+ HP + IY L+ L +M
Sbjct: 596 GQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKM 655
Query: 668 KRVGYVPNAS 677
GY P+ S
Sbjct: 656 AEEGYKPDVS 665
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 145/299 (48%), Gaps = 31/299 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C + + +++HA I ++ + +F+ + L+D+Y+KC + A V
Sbjct: 276 IDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+ +N+ +W +M+ G+ Q+ EA+
Sbjct: 336 FRRMTCRNIISW-------------------------------TAMIVGYGQNACSEEAV 364
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + +++ GS +S+CA + G Q H L S + + +AL+ +Y
Sbjct: 365 RAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLY 424
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L+T Y Q G A + +++F +M+ +G++PD VT
Sbjct: 425 GKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFI 484
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ ++G + + + ++D+Y++ G+ EA +MP
Sbjct: 485 GVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMP 543
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/619 (38%), Positives = 376/619 (60%), Gaps = 8/619 (1%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
L+D++ +CG + A ++F ++ +F NS++ G +K +D A LF SMPERD SW
Sbjct: 179 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 238
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N MVS +Q R EAL V M S+ L ++ S+L+ACA + G Q+HA + +
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ D Y+ SAL+++Y K G A+ VF+ + +RN V+W LI+ + Q G ++++E+
Sbjct: 299 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVEL 358
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F +M A + D+ LA+++S C S G Q+H+ ++ +++ +V+ N+L+ MYA
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYA 417
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KC L A +F M +++VS TSM++ Y++ +V AR F M E+NV++WNA++
Sbjct: 418 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 477
Query: 360 YTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Y Q+G E+ L +++ +L E V P T+ L CA+L +LG Q VK GL
Sbjct: 478 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 537
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
D V N++I MY KCG + + ++F+ + +D VSWNAMI G +Q+G G +A+
Sbjct: 538 ------DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIE 591
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F +L G KPD+++ + VL CSH+GLV+EG+ YF M + H ++P +H++CMVDLL
Sbjct: 592 IFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLL 651
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EAK LI+ MPM+P A +WG+LL+ACK+H N L E AK + E++ +SG Y+
Sbjct: 652 GRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYM 711
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
L++ +YA+ G+ + ++RKLMR +G+ K PG SW+E+ V+VF D HP I
Sbjct: 712 LMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRK 771
Query: 659 VLKMLTREMKRVGYVPNAS 677
L L ++ R+GYV S
Sbjct: 772 KLDELMEKIARLGYVRTDS 790
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 259/541 (47%), Gaps = 75/541 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF- 77
+ FA L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 4 TQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLL 63
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q ++ +L
Sbjct: 64 MDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLE 123
Query: 138 YFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+ MH S + + ++ A+ +C + Q+ A++ K D + +AL+DM+
Sbjct: 124 TFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMF 183
Query: 197 GKCGRVSCARR-------------------------------VFDGMRERNIVSWNSLIT 225
+CG V A R +FD M ER++VSWN +++
Sbjct: 184 VRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVS 243
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G +AL++ V M + G+ D T S ++ACA L++ + G Q+HA+++R
Sbjct: 244 ALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPH 302
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D + +ALV++YAK G EA+ VF+ + RN V+ T
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWT---------------------- 340
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
LI+G+ Q G E++ LF ++ E + + L++ C + DL LGR
Sbjct: 341 ---------VLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGR 391
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG+ + V NSLI MY KC +++ IF M E+D VSW +MI
Sbjct: 392 QLHSLCLK------SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + + +T +L A G E+G + + M E +
Sbjct: 446 AYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501
Query: 526 P 526
P
Sbjct: 502 P 502
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 217/429 (50%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I++ + ++ + L+++YAK GC A+ V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N W +I+G L++G C F+E++
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYG-----------------C--------------FTESV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E L +++ + +S C +D +G Q+H+L KS V + ++LI MY
Sbjct: 357 ELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 416
Query: 197 GKC-------------------------------GRVSCARRVFDGMRERNIVSWNSLIT 225
KC G V+ AR FDGM E+N+++WN+++
Sbjct: 417 AKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLG 476
Query: 226 CYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G D L ++ M++ + PD VT ++ CA L A K G QI R ++ L
Sbjct: 477 AYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GL 535
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
D + NA++ MY+KCG++ EAR VFD + ++++VS +M++GY++ K A +F
Sbjct: 536 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
+L+R + +S+ A+++G + +G +E F ++KR ++ P F +C +
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF-----SC--MV 648
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 649 DL-LGRAGH 656
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L LD A L+ C + R++H+ +KS + + N LI +YAKC
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A +F M+ K++ +W S+IT + G + A F M E++ +WN+M+ + Q
Sbjct: 421 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 480
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M SE + ++ ++ + CA K+G Q+ K D
Sbjct: 481 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 540
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A+I MY KCGR+ AR+VFD + ++IVSWN++IT Y Q+G A+E+F ++ G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 308 RCVFDRMPIR 317
+ + D MP++
Sbjct: 661 KDLIDDMPMK 670
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 208/428 (48%), Gaps = 22/428 (5%)
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSS------------DVYMGSALIDMYGKCGRV 202
G ++ S F T +HA LS S +V + +++ Y K GR+
Sbjct: 28 GRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRL 87
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSA 261
S A +F M R++ SWN+L++ Y Q+ +LE F+ M SG P+ TLA + +
Sbjct: 88 SDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKS 147
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C +L LQ+ A + + + ++D + ALVDM+ +CG ++ A +F R+ +
Sbjct: 148 CGALGWHSLALQLLAMVQKFDS-QDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM++GY K V A +F M ER+VVSWN +++ +Q+G EAL + ++ + V
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T+ + L ACA L+ L+ G+Q H V+++ D +V ++L+++Y K G
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHI------DPYVASALVELYAKSGC 320
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++ +F ++ +R+ V+W +I G Q G TE++ LF +M D + ++
Sbjct: 321 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 380
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C + GR+ S+ + G ++ + + L A+ + M + D V
Sbjct: 381 CCSRMDLCLGRQ-LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIV 438
Query: 562 IWGSLLAA 569
W S++ A
Sbjct: 439 SWTSMITA 446
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/619 (38%), Positives = 376/619 (60%), Gaps = 8/619 (1%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
L+D++ +CG + A ++F ++ +F NS++ G +K +D A LF SMPERD SW
Sbjct: 199 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 258
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N MVS +Q R EAL V M S+ L ++ S+L+ACA + G Q+HA + +
Sbjct: 259 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 318
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ D Y+ SAL+++Y K G A+ VF+ + +RN V+W LI+ + Q G ++++E+
Sbjct: 319 NLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVEL 378
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F +M A + D+ LA+++S C S G Q+H+ ++ +++ +V+ N+L+ MYA
Sbjct: 379 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYA 437
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KC L A +F M +++VS TSM++ Y++ +V AR F M E+NV++WNA++
Sbjct: 438 KCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGA 497
Query: 360 YTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Y Q+G E+ L +++ +L E V P T+ L CA+L +LG Q VK GL
Sbjct: 498 YIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLII 557
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
D V N++I MY KCG + + ++F+ + +D VSWNAMI G +Q+G G +A+
Sbjct: 558 ------DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIE 611
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F +L G KPD+++ + VL CSH+GLV+EG+ YF M + H ++P +H++CMVDLL
Sbjct: 612 IFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLL 671
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EAK LI+ MPM+P A +WG+LL+ACK+H N L E AK + E++ +SG Y+
Sbjct: 672 GRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYM 731
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
L++ +YA+ G+ + ++RKLMR +G+ K PG SW+E+ V+VF D HP I
Sbjct: 732 LMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRK 791
Query: 659 VLKMLTREMKRVGYVPNAS 677
L L ++ R+GYV S
Sbjct: 792 KLDELMEKIARLGYVRTDS 810
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 259/541 (47%), Gaps = 75/541 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF- 77
+ FA L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 24 TQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLL 83
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ NV T N ++ G K G + DA LF MP RD SWN+++SG+ Q ++ +L
Sbjct: 84 MDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLE 143
Query: 138 YFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+ MH S + + ++ A+ +C + Q+ A++ K D + +AL+DM+
Sbjct: 144 TFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMF 203
Query: 197 GKCGRVSCARR-------------------------------VFDGMRERNIVSWNSLIT 225
+CG V A R +FD M ER++VSWN +++
Sbjct: 204 VRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVS 263
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G +AL++ V M + G+ D T S ++ACA L++ + G Q+HA+++R
Sbjct: 264 ALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPH 322
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D + +ALV++YAK G EA+ VF+ + RN V+ T
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWT---------------------- 360
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
LI+G+ Q G E++ LF ++ E + + L++ C + DL LGR
Sbjct: 361 ---------VLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGR 411
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG+ + V NSLI MY KC +++ IF M E+D VSW +MI
Sbjct: 412 QLHSLCLK------SGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + + +T +L A G E+G + + M E +
Sbjct: 466 AYSQVGNVAKAREFFDGM----SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521
Query: 526 P 526
P
Sbjct: 522 P 522
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 217/429 (50%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I++ + ++ + L+++YAK GC A+ V
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 347
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N W +I+G L++G C F+E++
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYG-----------------C--------------FTESV 376
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E L +++ + +S C +D +G Q+H+L KS V + ++LI MY
Sbjct: 377 ELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 436
Query: 197 GKC-------------------------------GRVSCARRVFDGMRERNIVSWNSLIT 225
KC G V+ AR FDGM E+N+++WN+++
Sbjct: 437 AKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLG 496
Query: 226 CYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G D L ++ M++ + PD VT ++ CA L A K G QI R ++ L
Sbjct: 497 AYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GL 555
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
D + NA++ MY+KCG++ EAR VFD + ++++VS +M++GY++ K A +F
Sbjct: 556 IIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 615
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
+L+R + +S+ A+++G + +G +E F ++KR ++ P F +C +
Sbjct: 616 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHF-----SC--MV 668
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 669 DL-LGRAGH 676
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L LD A L+ C + R++H+ +KS + + N LI +YAKC
Sbjct: 381 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 440
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A +F M+ K++ +W S+IT + G + A F M E++ +WN+M+ + Q
Sbjct: 441 NLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQ 500
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M SE + ++ ++ + CA K+G Q+ K D
Sbjct: 501 HGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTS 560
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A+I MY KCGR+ AR+VFD + ++IVSWN++IT Y Q+G A+E+F ++ G
Sbjct: 561 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 620
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEA 680
Query: 308 RCVFDRMPIR 317
+ + D MP++
Sbjct: 681 KDLIDDMPMK 690
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 208/428 (48%), Gaps = 22/428 (5%)
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSS------------DVYMGSALIDMYGKCGRV 202
G ++ S F T +HA LS S +V + +++ Y K GR+
Sbjct: 48 GRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRL 107
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSA 261
S A +F M R++ SWN+L++ Y Q+ +LE F+ M SG P+ TLA + +
Sbjct: 108 SDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKS 167
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C +L LQ+ A + + + ++D + ALVDM+ +CG ++ A +F R+ +
Sbjct: 168 CGALGWHSLALQLLAMVQKFDS-QDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM++GY K V A +F M ER+VVSWN +++ +Q+G EAL + ++ + V
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T+ + L ACA L+ L+ G+Q H V+++ D +V ++L+++Y K G
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHI------DPYVASALVELYAKSGC 340
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++ +F ++ +R+ V+W +I G Q G TE++ LF +M D + ++
Sbjct: 341 FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISG 400
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C + GR+ S+ + G ++ + + L A+ + M + D V
Sbjct: 401 CCSRMDLCLGRQ-LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-EKDIV 458
Query: 562 IWGSLLAA 569
W S++ A
Sbjct: 459 SWTSMITA 466
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/667 (37%), Positives = 395/667 (59%), Gaps = 16/667 (2%)
Query: 18 DSSP----FAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
DSSP FA + SC L +S++ + SQ S++ L+D++ +CG +
Sbjct: 133 DSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDV--AAALVDMFVRCGTVD 190
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A ++F ++ +F NS++ G +K +D A LF SMPERD SWN MVS +Q R
Sbjct: 191 LASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 250
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
EAL V M S+ L ++ S+L+ACA + G Q+HA + ++ D Y+ SA
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASA 310
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+++Y KCG A+ VF+ + +RN V+W LI + Q+G ++++E+F +M A + D
Sbjct: 311 LVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLD 370
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+ LA+++S C S G Q+H+ ++ +++ +V+ N+L+ MYAKC L A +F
Sbjct: 371 QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYAKCDNLQSAESIF 429
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
M +++VS TSM++ +++ ++ AR F M +NV++WNA++ Y Q+G E+ L
Sbjct: 430 RFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLR 489
Query: 372 LFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
++ +L + V P T+ L CA+L +LG Q VK GL D V N
Sbjct: 490 MYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIL------DTSVAN 543
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
++I MY KCG + + ++F+ + +D VSWNAMI G +Q+G G +A+ +F +L G KP
Sbjct: 544 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKP 603
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D+++ + VL CSH+GLV+EG+ YF M + H ++P +H++CMVDLLGRAG L EAK L
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDL 663
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ MPM+P A +WG+LL+ACK+H N L E AK + E++ +SG Y+L++ +YA+ G+
Sbjct: 664 IDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKS 723
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+ ++RKLMR +G+ K PG SW+E+ V+VF D HP I L L ++ R+
Sbjct: 724 DDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARL 783
Query: 671 GYVPNAS 677
GYV S
Sbjct: 784 GYVRTDS 790
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/541 (29%), Positives = 264/541 (48%), Gaps = 75/541 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF- 77
+ FA L SC +++ R +H R++ AS +F+QN L+ Y CG L AR++
Sbjct: 4 TQAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLL 63
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ NV T N ++ G +K G + DA LF MP RD SWN+++SG+ Q ++ +L
Sbjct: 64 TDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLE 123
Query: 138 YFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV MH S + + + ++F A+ +C + + Q+ ++ K D + +AL+DM+
Sbjct: 124 SFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMF 183
Query: 197 GKCGRVSCARR-------------------------------VFDGMRERNIVSWNSLIT 225
+CG V A R +FD M ER++VSWN +++
Sbjct: 184 VRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVS 243
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Q+G +AL++ V M + G+ D T S ++ACA L++ + G Q+HA+++R
Sbjct: 244 ALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCI 303
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ V +ALV++YAKCG EA+ VF+ + RN V
Sbjct: 304 DPYV-ASALVELYAKCGCFKEAKGVFNSLHDRNNV------------------------- 337
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+W LIAG+ Q+G E++ LF ++ E + + L++ C + DL LGR
Sbjct: 338 ------AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGR 391
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H+ +K SG+ + V NSLI MY KC +++ IF M E+D VSW +MI
Sbjct: 392 QLHSLCLK------SGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMIT 445
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+Q G +A F M + +T +L A G E+G + ++ M E +
Sbjct: 446 AHSQVGNIAKAREFFDGM----STKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVR 501
Query: 526 P 526
P
Sbjct: 502 P 502
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 214/429 (49%), Gaps = 77/429 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ + L +C R S+ +++HA++I++ + ++ + L+++YAKCGC A+ V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++N W +I G F QH F+E++
Sbjct: 328 FNSLHDRNNVAWTVLIAG-------------------------------FLQHGCFTESV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E L +++ + +S C +D +G Q+H+L KS V + ++LI MY
Sbjct: 357 ELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 416
Query: 197 GKC-------------------------------GRVSCARRVFDGMRERNIVSWNSLIT 225
KC G ++ AR FDGM +N+++WN+++
Sbjct: 417 AKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLG 476
Query: 226 CYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G D L ++ M++ + PD VT ++ CA L A K G QI R ++ L
Sbjct: 477 AYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GL 535
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
D + NA++ MY+KCG++ EAR VFD + ++++VS +M++GY++ K A +F
Sbjct: 536 ILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDD 595
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLA 399
+L+R + +S+ A+++G + +G +E F ++KR ++ P F +C +
Sbjct: 596 ILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHF-----SC--MV 648
Query: 400 DLQLGRQAH 408
DL LGR H
Sbjct: 649 DL-LGRAGH 656
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 158/310 (50%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ +L LD A L+ C + R++H+ +KS + + N LI +YAKC
Sbjct: 361 QMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCD 420
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A +F M+ K++ +W S+IT + G I A F M ++ +WN+M+ + Q
Sbjct: 421 NLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQ 480
Query: 129 HDRFSEALGYFVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
H + L + M SE ++ ++ + CA K+G Q+ K D
Sbjct: 481 HGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTS 540
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A+I MY KCGR+ AR+VFD + ++IVSWN++IT Y Q+G A+E+F ++ G
Sbjct: 541 VANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG 600
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD ++ +V+S C+ +EG + R + L + +VD+ + G L EA
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 308 RCVFDRMPIR 317
+ + D MP++
Sbjct: 661 KDLIDEMPMK 670
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 208/450 (46%), Gaps = 42/450 (9%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR----- 207
+F AL +C +H L +S V++ + L+ Y CG + ARR
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 208 ---------------------------VFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+F M R++ SWN+L++ Y Q+ +LE F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 241 VRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
V M SG P+ T A + +C +L LQ+ + + ++D + ALVDM+
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGS-QDDSDVAAALVDMFV 184
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
+CG ++ A +F R+ + SM+ GY K V A +F M ER+VVSWN +++
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+Q+G EAL + ++ + V T+ + L ACA L+ L+ G+Q H V+++ L +
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPCI 303
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
D +V ++L+++Y KCG ++ +F ++ +R+ V+W +I G Q+G TE++ L
Sbjct: 304 -----DPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVEL 358
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F +M D + ++ C + GR+ S+ + G ++ +
Sbjct: 359 FNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ-LHSLCLKSGQIQAVVVSNSLISMYA 417
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ L A+++ M + D V W S++ A
Sbjct: 418 KCDNLQSAESIFRFMN-EKDIVSWTSMITA 446
>gi|356562121|ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 921
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/643 (36%), Positives = 379/643 (58%), Gaps = 44/643 (6%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
CL S ++ ++HA +IK ++ IQN L+D+Y KCG + A +F + + ++F W
Sbjct: 154 CLASTRLA--LQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSLFCW 211
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+I G + +A +F MPERD SWN+++S F+Q+ L FV+M + F
Sbjct: 212 NSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFK 271
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ ++GS LSACA D K G +HA + + +S D ++GS LIDMY KCG ++ ARRV
Sbjct: 272 PNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRV 331
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ + E+N VSW I+ Q G DAL +F +M + + DE TLA+++ C+
Sbjct: 332 FNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYA 391
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G +H ++ + + + +GNA++ MYA+CG +A F MP+R+ +S T+M++
Sbjct: 392 ASGELLHGYAIK-SGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITA 450
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+++ + AR F M ERNV++WN++++ Y Q+G +EE + L+ L++ ++V P TF
Sbjct: 451 FSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTF 510
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+ ACA+LA ++LG Q +HV K GL SD+ V NS++ MY +CG +++ ++
Sbjct: 511 ATSIRACADLATIKLGTQVVSHVTKFGL------SSDVSVANSIVTMYSRCGQIKEARKV 564
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+++ ++ +SWNAM+ AQNG G +A+ ++ ML KPDH++ + VL
Sbjct: 565 FDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLS-------- 616
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
DLLGRAG L++AK LI+ MP +P+A +WG+LL
Sbjct: 617 ---------------------------DLLGRAGLLNQAKNLIDGMPFKPNATVWGALLG 649
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC++H + +L E AKKL+E+ +SG YVLL+N+YAE G V +RKLM+ +G+ K
Sbjct: 650 ACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKS 709
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
PGCSWIE+ V+VF V + HP ++Y+ L+ + ++++ G
Sbjct: 710 PGCSWIEVDNRVHVFTVDETSHPQINKVYVKLEEMMKKIEDTG 752
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 187/671 (27%), Positives = 307/671 (45%), Gaps = 116/671 (17%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R++HA++I S + +F+ N L+ VY+ CG + A +VF + ++ N+FTWN+++
Sbjct: 24 RKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDS 83
Query: 99 GFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSE---Y 152
G + +A LF MP RD SW +M+SG+ Q+ ++ F+ M N + +
Sbjct: 84 GRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCDPF 143
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR------ 206
S+ + AC ++ Q+HA + K + + ++L+DMY KCG ++ A
Sbjct: 144 SYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNI 203
Query: 207 -------------------------RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
VF M ER+ VSWN+LI+ + Q G L FV
Sbjct: 204 ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFV 263
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M G +P+ +T SV+SACAS++ K G +HAR++R E D LG+ L+DMYAKC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEH-SLDAFLGSGLIDMYAKC 322
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G L AR VF+ + +N VS T +SG A
Sbjct: 323 GCLALARRVFNSLGEQNQVSWTCFISGVA------------------------------- 351
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q G ++AL LF +++ SV +T +L C+ G H + +K SG
Sbjct: 352 QFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAASGELLHGYAIK------SG 405
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN----------- 470
+S + VGN++I MY +CG E F +M RD +SW AMI +QN
Sbjct: 406 MDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFD 465
Query: 471 --------------------GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
G+ E + L+ M KPD VT + AC+ ++
Sbjct: 466 MMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKL 525
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G + S ++K GL+ +V + R G + EA+ + +++ ++ + + W +++AA
Sbjct: 526 GTQVVSHVTK-FGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWNAMMAAF 583
Query: 571 KVH--RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+ N + Y A E +P + +LS++ LGR G + + + L+ G+ +
Sbjct: 584 AQNGLGNKAIETYEAMLRTECKPDHISYVAVLSDL---LGRAGLLNQAKNLI--DGMPFK 638
Query: 629 PGCS-WIEILG 638
P + W +LG
Sbjct: 639 PNATVWGALLG 649
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 196/423 (46%), Gaps = 110/423 (26%)
Query: 22 FAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ +L +C S+SD + +HARI++ + + + F+ + LID+YAKCGCL AR+VF+
Sbjct: 277 YGSVLSAC---ASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFN 333
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ +N +W I+G+ ++G DD AL
Sbjct: 334 SLGEQNQVSWTCFISGVAQFGLGDD-------------------------------ALAL 362
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M + L E++ + L C+G G +H KS S V +G+A+I MY +
Sbjct: 363 FNQMRQASVVLDEFTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYAR 422
Query: 199 C-------------------------------GRVSCARRVFDGMRERNIVSWNSLITCY 227
C G + AR+ FD M ERN+++WNS+++ Y
Sbjct: 423 CGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTY 482
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
Q+G + + ++++V M + ++PD VT A+ + ACA LA K G Q+ + + + L +D
Sbjct: 483 IQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKF-GLSSD 541
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ + N++V MY++CG++ EAR VFD + ++N
Sbjct: 542 VSVANSIVTMYSRCGQIKEARKVFDSIHVKN----------------------------- 572
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF----------GNLLNACAN 397
++SWNA++A + QNG +A+ + + R P H ++ LLN N
Sbjct: 573 --LISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLSDLLGRAGLLNQAKN 630
Query: 398 LAD 400
L D
Sbjct: 631 LID 633
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 176/369 (47%), Gaps = 39/369 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A +L C + +H IKS S + + N +I +YA+CG A
Sbjct: 373 LDEFTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLA 432
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M ++ +W ++IT + G ID A + F MPER+ +WNSM+S + QH E +
Sbjct: 433 FRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGM 492
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V M S+ +F +++ ACA K+GTQV + ++K SSDV + ++++ MY
Sbjct: 493 KLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMY 552
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG++ AR+VFD + +N++SWN+++ + QNG + A+E + M+ + +PD ++
Sbjct: 553 SRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYV 612
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+S D+ + G LN+A+ + D MP
Sbjct: 613 AVLS-----------------------------------DLLGRAGLLNQAKNLIDGMPF 637
Query: 317 R-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS---WNALIAGYTQNGENEEALGL 372
+ N +++ A K++E NV + L Y ++GE E +
Sbjct: 638 KPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADM 697
Query: 373 FRLLKRESV 381
+L+K + +
Sbjct: 698 RKLMKVKGI 706
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 393/661 (59%), Gaps = 44/661 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV--YAKCGCLYGARKVF 77
SP + LL+ C KS+ +++H+ IK +S+ Q R+I + G + AR+VF
Sbjct: 9 SPIS-LLEKC---KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVF 64
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + +F WN++I G SR+ + P+ + M++ + DRF+
Sbjct: 65 DAIPQPTLFIWNTMIKGY---------SRI--NHPQNGVSMYLLMLASNIKPDRFT--FP 111
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +K + N AL +G L HA+ K + S++++ A I M+
Sbjct: 112 FLLKGFTRNMAL---QYGKVLLN-------------HAV--KHGFDSNLFVQKAFIHMFS 153
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
C V AR+VFD +V+WN +++ Y + + +F+ M G+ P+ VTL
Sbjct: 154 LCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVL 213
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC+ L + G I+ + + + +L+L N L+DM+A CG+++EA+ VFD M R
Sbjct: 214 MLSACSKLKDLEGGKHIY-KYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNR 272
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V+S TS+V+G+A + AR F ++ ER+ VSW A+I GY + EAL LFR ++
Sbjct: 273 DVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQ 332
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+V P +T ++L ACA+L L+LG T++ K+ ++ +D FVGN+LIDMY
Sbjct: 333 MSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK------NDTFVGNALIDMYF 386
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+V ++F+ M +D +W AMIVG A NG+G EAL +F M+ PD +T IG
Sbjct: 387 KCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIG 446
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VLCAC+HAG+VE+G+ +F SM+ +HG+ P HY CMVDLLGRAG L+EA +I MP++
Sbjct: 447 VLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVK 506
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P++++WGSLL AC+VH+N+ L E AK++LE+EP N YVLL N+YA RW + +VR
Sbjct: 507 PNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVR 566
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
KLM +RG+ K PGCS +E+ G+V F+ D+ HP +KEIY L+ + +++ + GY P+ S
Sbjct: 567 KLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTS 626
Query: 678 D 678
+
Sbjct: 627 E 627
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 207/483 (42%), Gaps = 102/483 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL R+ ++ + + +K F S +F+Q I +++ C + ARKVF
Sbjct: 106 DRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVF 165
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D V TWN M+SG+ + +F ++
Sbjct: 166 DMGDAWEVVTWN-------------------------------IMLSGYNRVKQFKKSKM 194
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + + + LSAC+ D + G ++ ++ ++ + + LIDM+
Sbjct: 195 LFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFA 254
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD---------- 235
CG + A+ VFD M+ R+++SW S++T + G P D
Sbjct: 255 ACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDG 314
Query: 236 ---------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
AL +F M S ++PDE T+ S+++ACA L A + G + + + ++N
Sbjct: 315 YLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK-NSIKN 373
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D +GNAL+DMY KCG + +A+ VF M ++ + T+M+ G A
Sbjct: 374 DTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLA---------------- 417
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG EEAL +F + S+ P T+ +L AC + ++ G+
Sbjct: 418 ---------------INGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQS 462
Query: 407 AH-THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
+ ++HG++ ++ ++D+ + G +E+ + M V+ + + W +++
Sbjct: 463 FFISMTMQHGIK------PNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516
Query: 465 VGC 467
C
Sbjct: 517 GAC 519
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/693 (36%), Positives = 389/693 (56%), Gaps = 73/693 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVF 77
SS +A LL + R++ + +H I+++ + N L+ Y K G AR+VF
Sbjct: 6 SSQYAALLSAAARTEPHA-AGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVF 64
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + N+FT+N++++ L +DD LFASM +RD S+N++++GF+ + A+
Sbjct: 65 DATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVR 124
Query: 138 YFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ + ++ S + + + A + D +G Q H + + + + ++GS L+ M
Sbjct: 125 LYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGM 184
Query: 196 YGKCGRVSCARRVFDGMRERNIV-------------------------------SWNSLI 224
Y K G + A+RVFD M +N+V +W +++
Sbjct: 185 YAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMV 244
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
T + QNG S AL F RM GI D+ T S+++AC +L+A ++G QIHA ++R
Sbjct: 245 TGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTH-Y 303
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+++ +G+ALVDMY+KC S+K A F +
Sbjct: 304 DDNVFVGSALVDMYSKC-------------------------------RSIKPAETAFRR 332
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M +N++SW ALI GY QNG +EEA+ +F ++R+ + P +T G+++++CANLA L+ G
Sbjct: 333 MSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
Q H L +SG I V N+L+ +Y KCGS+ED R+F+ M+ D VSW A++
Sbjct: 393 AQFHC------LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALV 446
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G AQ G E + LF+KML KPD VT IGVL ACS AG VE+G YF SM K+HG+
Sbjct: 447 TGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGI 506
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
P+ DHYTCM+DL R+G L EA+ I+ MPM PDA+ WG+LL+AC++ ++ +G++ A+
Sbjct: 507 VPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAE 566
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
LLEI+P N YVLL +M+A G W +V ++R+ MR R V K+PGCSWI+ V++F
Sbjct: 567 NLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 626
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D+ HP +K IY L+ L +M GY P+ S
Sbjct: 627 ADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVS 659
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 150/300 (50%), Gaps = 31/300 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C ++ +++HA II++ + +F+ + L+D+Y+KC + A
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETA 329
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +MS KN+ +W ++I G + G ++A R+F+ M +RD +
Sbjct: 330 FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEM-QRDGIDPD---------------- 372
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+++ GS +S+CA + G Q H L S + + +AL+ +Y
Sbjct: 373 --------------DFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLY 418
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VSW +L+T Y Q G A + +++F +M+A ++PD VT
Sbjct: 419 GKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFI 478
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+SAC+ ++G + + + ++D+Y++ G+L EA +MP+
Sbjct: 479 GVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPM 538
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/659 (37%), Positives = 369/659 (55%), Gaps = 70/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL +C +++ +RVHAR+ + +EI++ L+ +Y KC
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKC---------- 354
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
G ++DA +F + R+ SW +M++GFAQH R EA
Sbjct: 355 ---------------------GSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFL 393
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F KM + +F S L AC+ K G Q+H + K+ Y +D + +AL+ MY
Sbjct: 394 FFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYA 453
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VF+ + ++N+V+WN++IT Y Q+ +A+ F ++ GI+PD T S
Sbjct: 454 KCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTS 513
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++ C S A + G + + ++R +DL + NALV M+ CG L
Sbjct: 514 ILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDL------------- 559
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
SA +F M ER++VSWN +IAG+ Q+GEN+ A F++++
Sbjct: 560 ------------------MSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQ 601
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P TF LLNACA+ L GR+ H + + L + D+ VG LI MY
Sbjct: 602 ESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAAL------DCDVVVGTGLISMYT 655
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS++D +F + +++ SW +MI G AQ+G G EAL LF +M G KPD +T +G
Sbjct: 656 KCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVG 715
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L AC+HAGL++EG +F SM K+ + P +HY CMVDL GRAG L EA I M ++
Sbjct: 716 ALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVK 774
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD+ +WG+LL AC+VH ++ L E VA+K LE++P++ G YV+LSN+YA G W EV ++R
Sbjct: 775 PDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMR 834
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K+M RGVVK+PG SWIE+ G V++F DK HP +EI+ L L EMK++GYVP+
Sbjct: 835 KVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDT 893
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/622 (26%), Positives = 293/622 (47%), Gaps = 110/622 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ LL C++ K++ D R+H I S+ +IF+
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFM------------------------- 141
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
WN +I+ K G + A ++F MP++D SWN ++ G+ QH R+ EA +
Sbjct: 142 ------WNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQ 195
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +Y+F L+ACA + + G ++ +L+ + + +D+++G+ALI+M+ KCG
Sbjct: 196 MVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGG 255
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A +VF+ + R++++W S+IT ++ A +F M G++PD+V S++ A
Sbjct: 256 VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKA 315
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C A ++G ++HAR M+ L ++ +G AL+ MY KCG + +A VF+ + RNVVS
Sbjct: 316 CNHPEALEQGKRVHAR-MKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLER----NVVSW------------------------ 353
T+M++G+A+ ++ A L F KM+E N V++
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 354 -----------NALIAGYTQNGENEEALGLFRLLKRESVC-------------------- 382
AL++ Y + G +A +F + +++V
Sbjct: 435 KAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVA 494
Query: 383 -----------PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
P TF ++LN C + L+LG+ + +++ G ESD+ + N+
Sbjct: 495 TFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGF------ESDLHIRNA 548
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+ M++ CG + +F M ERD VSWN +I G Q+G A FK M G KPD
Sbjct: 549 LVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPD 608
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+T G+L AC+ + EGR+ ++ E L T ++ + + G +D+A +
Sbjct: 609 QITFTGLLNACASPEALTEGRR-LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVF 667
Query: 552 EAMPMQPDAVIWGSLLAACKVH 573
+P + + W S++ H
Sbjct: 668 HNLP-KKNVYSWTSMITGYAQH 688
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 256/504 (50%), Gaps = 46/504 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+ ++ ++ + SEA+ + + S + + ++ S L C + G ++H +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
S+ D++M + LI MY KCG + A+++FD M ++++ SWN L+ Y Q+ +A +
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
+M+ G++PD+ T +++ACA +G ++ + ++ DL +G AL++M+
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNA-GWDTDLFVGTALINMHI 251
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG +++A VF+ +P R++++ TSM++G A+ K
Sbjct: 252 KCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK----------------------- 288
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+A LF++++ E V P F +LL AC + L+ G++ H + + GL
Sbjct: 289 --------QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGL--- 337
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+++I+VG +L+ MY KCGS+ED +F + R+ VSW AMI G AQ+G EA
Sbjct: 338 ---DTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLF 394
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F KM+ G +P+ VT + +L ACS +++GR+ + K G T ++ +
Sbjct: 395 FNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA-GYITDDRVRTALLSMYA 453
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPY 597
+ G L +A+ + E + Q + V W +++ A H + LL+ I+P +S
Sbjct: 454 KCGSLMDARNVFERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 598 VLL----SNMYAELGRWGEVVRVR 617
+L S ELG+W + + +R
Sbjct: 513 SILNVCKSPDALELGKWVQSLIIR 536
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/637 (37%), Positives = 363/637 (56%), Gaps = 69/637 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+H ++K+ F +F+ L+D+YAKC C+ A +F +
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE------------------- 224
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ W +MV+G+AQ+ +A+ +F MH++ ++Y+F + L+A
Sbjct: 225 ----------FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C+ + G QVH + KS + S+VY+ SAL+DMY KCG + A+ + + M + ++VSW
Sbjct: 275 CSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW 334
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NSL+ + ++G +AL +F M ++ D+ T SV++ C + +H +++
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIK 392
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
N ++ NALVDMYAK G ++ A V
Sbjct: 393 -TGFENYKLVSNALVDMYAKTGDMDCAYTV------------------------------ 421
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
F KMLE++V+SW +L+ GY QN +EE+L +F ++ V P + ++L+ACA L
Sbjct: 422 -FEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTL 480
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G+Q H +K GLR+ V NSL+ MY KCG ++D IF +M +D ++W
Sbjct: 481 LEFGKQVHLDFIKSGLRWSQS------VYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 534
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+IVG AQNG G +L + M+ G +PD +T IG+L ACSHAGLV+EGRKYF M+K
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+G+ P +HY CM+DL GR+G LDEAK L++ M ++PDA +W SLL+AC+VH N+ L E
Sbjct: 595 VYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAE 654
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A L E+EP N+ PYV+LSNMY+ +W +V ++RKLM+ +G+VK+PGCSW+EI V
Sbjct: 655 RAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRV 714
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
N F+ D+ HP EIY + + +K GYVP+ S
Sbjct: 715 NTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMS 751
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 225/449 (50%), Gaps = 75/449 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + +VH I+KS F S +++Q+ L+D+YAKCG L A+ + + M
Sbjct: 268 FPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETME 327
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +V +WNS++ G ++ G ++A RLF +
Sbjct: 328 DDDVVSWNSLMVGFVRHGLEEEALRLFKN------------------------------- 356
Query: 142 MHSENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
MH N + +Y+F S L+ C GS++ K VH L+ K+ + + + +AL+DMY K G
Sbjct: 357 MHGRNMKIDDYTFPSVLNCCVVGSINPK---SVHGLIIKTGFENYKLVSNALVDMYAKTG 413
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ CA VF+ M E++++SW SL+T Y QN ++L++F M +G+ PD+ +AS++S
Sbjct: 414 DMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILS 473
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA L + G Q+H ++ LR + N+LV MYAKCG L++A +F M +++V+
Sbjct: 474 ACAELTLLEFGKQVHLDFIK-SGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI 532
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ T+++ GYA QNG+ +L + +
Sbjct: 533 TWTAIIVGYA-------------------------------QNGKGRNSLKFYDAMVSSG 561
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKC 439
P TF LL AC++ + GR+ + K +G++ G E +ID++ +
Sbjct: 562 TRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIK--PGPEHYA----CMIDLFGRS 615
Query: 440 GSVEDGCRIFETM-VERDWVSWNAMIVGC 467
G +++ ++ + M V+ D W +++ C
Sbjct: 616 GKLDEAKQLLDQMDVKPDATVWKSLLSAC 644
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 186/418 (44%), Gaps = 77/418 (18%)
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE----------------- 228
+Y + L++ K G+V+ AR++FD M +++ SWN++I+ Y
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 229 --------------QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+ G +A ++F M G + + TL SV+ C+SL + G I
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H V+ N NV T +V YAK
Sbjct: 185 HG-----------FVVKNGFEG---------------------NVFVVTGLVDMYAKCKC 212
Query: 335 VKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
V A +F K LE +N V W A++ GY QNG+ +A+ FR + + V YTF +
Sbjct: 213 VSEAEFLF-KGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTI 271
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L AC+++ G Q H +VK SG S+++V ++L+DMY KCG +++ + ET
Sbjct: 272 LTACSSVLARCFGEQVHGFIVK------SGFGSNVYVQSALVDMYAKCGDLKNAKNMLET 325
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M + D VSWN+++VG ++G EAL LFK M K D T VL C +
Sbjct: 326 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI---N 382
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
K + + G K +VD+ + G +D A T+ E M ++ D + W SL+
Sbjct: 383 PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKM-LEKDVISWTSLVTG 439
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 10/284 (3%)
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N L++ +K G++N+AR +FD+MP ++ S +M+S Y + AR +F ++ +
Sbjct: 69 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
+W+++I+GY + G EA LFR ++ E + +T G++L C++L +Q G H V
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQ 469
VK+G E ++FV L+DMY KC V + +F+ + ++ V W AM+ G AQ
Sbjct: 189 VKNGF------EGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQ 242
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
NG G +A+ F+ M G + + T +L ACS G + + K G
Sbjct: 243 NGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS-GFGSNVY 301
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ +VD+ + G L AK ++E M D V W SL+ H
Sbjct: 302 VQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 344
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/612 (41%), Positives = 374/612 (61%), Gaps = 30/612 (4%)
Query: 68 GCL-----YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
GCL Y AR++F+KM +++ +WN +I+G +++ + A LF MPERD SWN+M
Sbjct: 89 GCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAM 148
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+SG+AQ+ EA F +M +N S+ L+A + + + L +S+
Sbjct: 149 LSGYAQNGYVKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARR----LFESKA 200
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++ + ++ Y K R+ AR +FD M ER+ VSWN++I+ Y QNG +A +F
Sbjct: 201 DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF-- 258
Query: 243 MMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+E + V + A ++ + + G+ AR + + V NA++ Y +C
Sbjct: 259 --------EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQC 310
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
++++AR +F+ MP +NV S +M++GYA+ + AR F +M +R+ +SW A+IAGY
Sbjct: 311 KRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 370
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q+G EEAL LF +KR+ TF + L+ CA +A L+LG+Q H VVK GL
Sbjct: 371 QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL----- 425
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
ES +VGN+L+ MY KCG+++D +FE + E++ VSWN MI G A++G+G EAL LF+
Sbjct: 426 -ESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFE 484
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
M G PD VTM+GVL ACSH GLV++G +YF SM++++G+ HYTCM+DLLGRA
Sbjct: 485 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 544
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G LD+A+ L++ MP +PDA WG+LL A ++H N LGE AK + E+EP NSG YVLLS
Sbjct: 545 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLS 604
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+YA GRWG+V R+R MR RGV K PG SW+E+ ++ F V D HP IY L+
Sbjct: 605 NLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLE 664
Query: 662 MLTREMKRVGYV 673
L +MK+ GYV
Sbjct: 665 ELDLKMKKEGYV 676
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 235/502 (46%), Gaps = 64/502 (12%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+ K+I ++ +S + +L + +++ + D RR + +S+ E+ N ++ Y
Sbjct: 159 KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR----LFESKADWELISWNCMMGGY 214
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
K L AR +FD+M ++ +WN++I+G + G + +A RLF P RD +W +MVS
Sbjct: 215 VKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVS 274
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G+ Q+ EA F M +N S + AG V K Q L ++
Sbjct: 275 GYVQNGMLDEARRVFDGMPEKNSV-------SWNAIIAGYVQCKRMDQARELF-EAMPCQ 326
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+V + +I Y + G ++ AR FD M +R+ +SW ++I Y Q+G +AL +FV M
Sbjct: 327 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 386
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G + T S +S CA +AA + G Q+H R+++ L + +GNAL+ MY KCG +
Sbjct: 387 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNI 445
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
++A VF+ + + VVS +M++GYA+ +G
Sbjct: 446 DDAYIVFEGIEEKEVVSWNTMIAGYAR-------------------------------HG 474
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EAL LF +K+ + P T +L+AC +HT +V G +
Sbjct: 475 FGKEALMLFESMKKTGILPDDVTMVGVLSAC-----------SHTGLVDKGTEYFYSMTQ 523
Query: 425 DI-FVGNS-----LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEAL 477
D NS +ID+ + G ++D + + M E D +W A++ A +G L
Sbjct: 524 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL--GASRIHGNTEL 581
Query: 478 GLFKKMLLCGEKPDHVTMIGVL 499
G ++ +PD+ M +L
Sbjct: 582 GEKAAKMIFEMEPDNSGMYVLL 603
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 72/358 (20%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+IV WN IT + +NG AL +F M ++ +++S C
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSM----PRRSSISWNAMISGC------------- 90
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
L ND K AR +F++MP R++VS M+SG + ++
Sbjct: 91 --------LSND---------------KFYLARQLFEKMPTRDLVSWNVMISGCVRYRNL 127
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
++ARL+F +M ER+VVSWNA+++GY QNG +EA +F E C ++ +L A
Sbjct: 128 RAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF----DEMPCKNSISWNGMLAAY 183
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++ R+ F S + ++ N ++ Y+K + D IF+ M ER
Sbjct: 184 VQNGRIEDARRL----------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 233
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP--DHVTMIGVLCACSHAGLVEEGRK 513
D VSWN MI G AQNG EA LF+ E P D T ++ G+++E R+
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFE------ESPVRDVFTWTAMVSGYVQNGMLDEARR 287
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGC--LDEAKTLIEAMPMQPDAVIWGSLLAA 569
F M P K+ + + G C +D+A+ L EAMP Q + W +++
Sbjct: 288 VFDGM-------PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITG 337
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/689 (38%), Positives = 388/689 (56%), Gaps = 54/689 (7%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
S R VHA I+ S F I NRLID Y K + AR +FDK+ ++ ++++
Sbjct: 12 TSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSA 71
Query: 95 LLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY 152
G I A +LF + P RD S+N+M++ F+ AL FV+M F +
Sbjct: 72 YSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPF 131
Query: 153 SFGSALSACAGSVD------------FKMG-----TQVHALLS-------KSRYSSDVYM 188
+F S L A + D FK G + ++AL+S +S V M
Sbjct: 132 TFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLM 191
Query: 189 GSA-------------------LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
+A +I Y + + AR + +GM + V+WN++I+ Y
Sbjct: 192 AAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVH 251
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND-- 287
G +A ++ RM + GI+ DE T SV+SA ++ F G Q+HA ++R +
Sbjct: 252 RGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHF 311
Query: 288 -LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
L + NAL+ +Y +CGKL EAR VFD+MP++++VS +++SG A ++ A +F +M
Sbjct: 312 VLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMP 371
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
R++++W +I+G QNG EE L LF +K E + P Y + + +C+ L L G+Q
Sbjct: 372 VRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H+ +++ G +S + VGN+LI MY +CG VE +F TM D VSWNAMI
Sbjct: 432 LHSQIIQ------LGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAA 485
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G+G +A+ L++KML PD +T + +L ACSHAGLV+EGR YF +M +G+ P
Sbjct: 486 LAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITP 545
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+DHY+ ++DLL RAG EAK + E+MP +P A IW +LLA C +H N+ LG A +L
Sbjct: 546 EEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRL 605
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
LE+ P G Y+ LSNMYA LG+W EV RVRKLMR+RGV K+PGCSWIE+ V+VF+V
Sbjct: 606 LELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVD 665
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
D HP +Y L+ L EM+++GYVP+
Sbjct: 666 DAVHPEVHAVYRYLEQLVHEMRKLGYVPD 694
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A + SC S+ + +++H++II+ S + + N LI +Y++CG + A VF M
Sbjct: 413 YAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMP 472
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +WN++I L AQH +A+ + K
Sbjct: 473 YVDSVSWNAMIAAL-------------------------------AQHGHGVQAIQLYEK 501
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSALIDMYGK 198
M E+ +F + LSAC+ + K G + D Y S LID+ +
Sbjct: 502 MLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHY--SRLIDLLCR 559
Query: 199 CGRVSCARRVFDGMR-ERNIVSWNSLI 224
G S A+ V + M E W +L+
Sbjct: 560 AGMFSEAKNVTESMPFEPGAPIWEALL 586
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/658 (37%), Positives = 367/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C + +++H+ +IK +S++ I+ L+D+Y KC + A + F
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF 372
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+NV W N M+ + Q SE+
Sbjct: 373 LTTETENVVLW-------------------------------NVMLVAYGQLGNLSESYW 401
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M E ++Y++ S L C +G Q+H + KS + +VY+ S LIDMY
Sbjct: 402 IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA 461
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + AR + +RE ++VSW ++I Y Q+ ++AL++F M GI D + +S
Sbjct: 462 KHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSS 521
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A +G QIHA+ DL +GNALV +YA+CG+ +A F+++ +
Sbjct: 522 AISACAGIQALNQGQQIHAQ-SYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAK 580
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +S +++SG+A Q+G EEAL +F +
Sbjct: 581 DNISWNALISGFA-------------------------------QSGHCEEALQVFSQMN 609
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V +TFG+ ++A AN A+++ G+Q H ++K +G +S+ N LI +Y
Sbjct: 610 QAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIK------TGYDSETEASNVLITLYS 663
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED R F M E++ VSWNAMI G +Q+GYG+EA+ LF++M G P+HVT +G
Sbjct: 664 KCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVG 723
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV EG YF SMSKEHGL P +HY C+VDLLGRA L A+ IE MP++
Sbjct: 724 VLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIE 783
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA+IW +LL+AC VH+NI +GE+ A+ LLE+EP +S YVLLSNMYA G+W R R
Sbjct: 784 PDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTR 843
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++M+ RGV K+PG SWIE+ ++ F V D+ HPL ++IY + L +GYV +
Sbjct: 844 QMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQD 901
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 276/558 (49%), Gaps = 82/558 (14%)
Query: 18 DSSPFAKLLDSCLRSKS-VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D S FA +L +C K+ T ++HA+II F S + N LID+Y+K G + A+ V
Sbjct: 110 DESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLV 169
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ RLF +D SW +M+SG +Q+ R EA+
Sbjct: 170 FE---------------------------RLFL----KDSVSWVAMISGLSQNGREDEAI 198
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +MH + Y F S LSAC FK+G Q+H + K SS+ ++ +AL+ +Y
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLY 258
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ G + A ++F M R+ +S+NSLI+ Q G + AL++F +M ++PD VT+A
Sbjct: 259 SRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++SACAS+ A +G Q+H+ +++ + +DL++ +L+D+Y KC FD
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKM-GMSSDLIIEGSLLDLYVKC---------FD---- 364
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+++A F NVV WN ++ Y Q G E+ +F +
Sbjct: 365 ------------------IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM 406
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ E + P YT+ ++L C +L L LG Q HT V+K G +F +++V + LIDMY
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF------NVYVCSVLIDMY 460
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
K G ++ I + + E D VSW AMI G Q+ EAL LF++M G + D++
Sbjct: 461 AKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFS 520
Query: 497 GVLCACSHAGLVEEGRK-----YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ AC+ + +G++ Y S S++ + +V L R G +A
Sbjct: 521 SAISACAGIQALNQGQQIHAQSYISGYSEDLSIG------NALVSLYARCGRAQDAYLAF 574
Query: 552 EAMPMQPDAVIWGSLLAA 569
E + + D + W +L++
Sbjct: 575 EKIDAK-DNISWNALISG 591
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 267/552 (48%), Gaps = 76/552 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L + C S S+ D +++HARI KS F E + +RLID+Y
Sbjct: 16 LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIY-------------------- 55
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
L G +D+A +LF +P + WN ++SG S+ LG F M +
Sbjct: 56 -----------LAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMIT 104
Query: 145 ENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
EN E +F S L AC+G F++ Q+HA + + S + + LID+Y K G V
Sbjct: 105 ENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVD 164
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ VF+ + ++ VSW ++I+ QNG +A+ +F +M S + P +SV+SAC
Sbjct: 165 LAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACT 224
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ FK G Q+H +++ L ++ + NALV +Y++ G L A +F +M R+ +S
Sbjct: 225 KIELFKLGEQLHGFIVKW-GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYN 283
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++SG A Q G ++ AL LF ++ + + P
Sbjct: 284 SLISGLA-------------------------------QRGFSDRALQLFEKMQLDCMKP 312
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL+ACA++ G+Q H++V+K G+ SD+ + SL+D+Y+KC +E
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKMGM------SSDLIIEGSLLDLYVKCFDIE 366
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
F T + V WN M+V Q G +E+ +F +M + G P+ T +L C+
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
G ++ G + + + K G + Y C ++D+ + G LD A+ +++ + + D V
Sbjct: 427 SLGALDLGEQIHTQVIKS-GFQ--FNVYVCSVLIDMYAKHGELDTARGILQRL-REEDVV 482
Query: 562 IWGSLLAACKVH 573
W +++A H
Sbjct: 483 SWTAMIAGYTQH 494
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 267/552 (48%), Gaps = 71/552 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L +C + + ++H I+K +SE F+ N L+ +Y++ G L A ++F KM
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ ++NS+I+GL + GF D A +LF K
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFE-------------------------------K 304
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + S LSACA G Q+H+ + K SSD+ + +L+D+Y KC
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A F N+V WN ++ Y Q G S++ +F++M G+ P++ T S++
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C SL A G QIH ++++ + ++ + + L+DMYAK G+L+ AR + R+ +VVS
Sbjct: 425 CTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T+M++G YTQ+ EAL LF+ ++ + +
Sbjct: 484 WTAMIAG-------------------------------YTQHDLFAEALKLFQEMENQGI 512
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ F + ++ACA + L G+Q H ++SG D+ +GN+L+ +Y +CG
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQ------SYISGYSEDLSIGNALVSLYARCGR 566
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+D FE + +D +SWNA+I G AQ+G+ EAL +F +M G + + T + A
Sbjct: 567 AQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSA 626
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
++ +++G++ + M K G + ++ L + G +++AK MP + + V
Sbjct: 627 TANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVV 684
Query: 562 IWGSLLAACKVH 573
W +++ H
Sbjct: 685 SWNAMITGYSQH 696
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/709 (36%), Positives = 403/709 (56%), Gaps = 59/709 (8%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
S S R VHA +I S F NRL+++Y K L AR++F+++ N + ++IT
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87
Query: 94 GLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
G ++ +F P RD +N+M++G+A + AL F M ++F +
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 152 YSFGSALSACAGSV-DFKMGTQVHALLSKSR---YSSDVYMGSALIDMYGK--------C 199
++F S LSA V + + Q+H + K+ SS V +AL+ +Y K C
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYVKRASELGISC 205
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS------------- 246
+ AR++FD M +R+ ++W ++IT Y +N + A EVF M+ +
Sbjct: 206 SAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265
Query: 247 ------------------GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND- 287
GI+ D++T +++SACA++ +F+ G Q+HA +++ E N
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHS 325
Query: 288 --LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
L + NAL+ +Y K K++EAR +F MP+RN+++ +++SGY A ++ A+ F +M
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+N+++ +I+G QNG +E L LF+ ++ + P + F L AC+ L L+ GR
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGR 445
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H +V G ES + VGN++I MY KCG VE +F TM D VSWN+MI
Sbjct: 446 QLHAQLVHLGY------ESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIA 499
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
Q+G+G +A+ LF +ML G PD +T + VL ACSHAGLVE+GR YF+SM + +G+
Sbjct: 500 ALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +DHY MVDL RAG A+ +I++MP +P A +W +LLA C++H N+ LG A++
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L ++ P N G YVLLSN+YA++GRW EV +VRKLMR + V K+P CSWIE+ V+VFMV
Sbjct: 620 LFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMV 679
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS---DDEAYEEQNGSNST 691
D HP +Y L+ L EMK++GY+P+ D YE++ + ST
Sbjct: 680 DDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 158/303 (52%), Gaps = 4/303 (1%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE----IFIQNRLIDVYAKCGCLYG 72
D + ++ +C S ++VHA I+K++ + + N LI +Y K +
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARK+F M +N+ TWN+I++G + G +++A F MP ++ + M+SG AQ+
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
E L F +M + F +++F AL+AC+ + G Q+HA L Y S + +G+A+
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAM 466
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I MY KCG V A VF M ++VSWNS+I Q+G A+E+F +M+ G+ PD
Sbjct: 467 ISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDR 526
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T +V++AC+ ++G ++ + +VD++ + G + AR V D
Sbjct: 527 ITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVID 586
Query: 313 RMP 315
MP
Sbjct: 587 SMP 589
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/629 (39%), Positives = 363/629 (57%), Gaps = 48/629 (7%)
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
K G + DA +FA MPERD SW MV G + RF EA+ + M ++ F ++++ +
Sbjct: 4 KSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTN 63
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG---------------- 200
LS+CA + +G +VH+ + K S V + +++++MYGKCG
Sbjct: 64 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 123
Query: 201 ---------------RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM- 244
R+ A +F+ M +R+IVSWN++I Y QNG + AL++F RM+
Sbjct: 124 VSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLH 183
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
S + PDE T+ SV+SACA+L + G Q+HA ++R E N V NAL+ YAK G +
Sbjct: 184 ESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT-NALISTYAKSGSV 242
Query: 305 NEARCVFDRM--PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
AR + D+ NV+S T+++ GY K ++SAR MF M R+VV+W A+I GY Q
Sbjct: 243 ENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQ 302
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NG N+EA+ LFR + P YT +L+ CA+LA L G+Q H ++ L
Sbjct: 303 NGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL------ 356
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFK 481
E V N++I MY + GS R+F+ + R + ++W +MIV AQ+G G EA+GLF+
Sbjct: 357 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 416
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+ML G +PD +T +GVL ACSHAG V EG++Y+ + EH +AP HY CMVDLL RA
Sbjct: 417 EMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 476
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G EA+ I MP++PDA+ WGSLL+AC+VH+N L E A+KLL I+P+NSG Y ++
Sbjct: 477 GLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIA 536
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+Y+ GRW + R+ K +++ V K+ G SW I ++VF D HP +Y +
Sbjct: 537 NVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAA 596
Query: 662 MLTREMKRVGYVPNAS------DDEAYEE 684
+ E+K G+VP+ DDE EE
Sbjct: 597 RMWEEIKGAGFVPDLQSVLHDVDDELKEE 625
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 234/487 (48%), Gaps = 83/487 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+L SC +++ + R+VH+ ++K S + + N ++++Y KCG A VF++M
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +WN++++ G +D A LF SMP+R SWN+M++G+ Q+ ++AL F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 142 M-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M H + A E++ S LSACA + ++G QVHA + ++ + + + +ALI Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 201 RVSCARRVFDG---------------------------------MRERNIVSWNSLITCY 227
V ARR+ D M R++V+W ++I Y
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
EQNG +A+++F M+ G EP+ TLA+V+S CASLA G QIH R +R L
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR-SLLEQS 359
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ NA++ MYA+ G AR +FD++ R
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWR------------------------------ 389
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+ ++W ++I Q+G+ EEA+GLF + R V P T+ +L+AC +
Sbjct: 390 KETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC-----------S 438
Query: 408 HTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSW 460
H V G R+ +++ + ++D+ + G + M VE D ++W
Sbjct: 439 HAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAW 498
Query: 461 NAMIVGC 467
+++ C
Sbjct: 499 GSLLSAC 505
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 188/371 (50%), Gaps = 7/371 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C +V ++VHA I++++ A + N LI YAK G + AR++
Sbjct: 190 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 249
Query: 78 DKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D+ ++ NV ++ +++ G +K G ++ A +F M RD +W +M+ G+ Q+ R EA
Sbjct: 250 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 309
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + + Y+ + LS CA G Q+H +S + +A+I M
Sbjct: 310 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITM 369
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G ARR+FD + + ++W S+I Q+G +A+ +F M+ +G+EPD +T
Sbjct: 370 YARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRIT 429
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC+ EG + + ++ ++ ++ +VD+ A+ G +EA+ RM
Sbjct: 430 YVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM 489
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEAL 370
P+ + ++ S++S + + A L K+L N +++A+ Y+ G +A
Sbjct: 490 PVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAA 549
Query: 371 GLFRLLKRESV 381
+++ K ++V
Sbjct: 550 RIWKARKEKAV 560
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/694 (37%), Positives = 392/694 (56%), Gaps = 53/694 (7%)
Query: 29 CLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
CL+S S S R VHA +I S F I NRLID+Y+K L AR +FD++ ++
Sbjct: 22 CLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVA 81
Query: 88 WNSIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
++I G + + ++F+ P RD +N+M++ ++ + A+ F M +
Sbjct: 82 RTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRD 141
Query: 146 NFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--- 201
NF Y+F S L A A + K Q+H + KS + +ALI Y KC
Sbjct: 142 NFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPS 201
Query: 202 ------VSCARRVFDGMRERNIVSWNSLITCYEQN------------------------- 230
++ AR++FD M R+ +SW ++IT Y +N
Sbjct: 202 AQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMI 261
Query: 231 ------GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC-EK 283
G +A E+F +M+ S I+ DE T SV+S CA+ F+ G ++HA ++
Sbjct: 262 SGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVAN 321
Query: 284 LRNDLVL--GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
D+ + NAL+ Y KCGK++ A+ +F++MP R++VS ++SGY + A+
Sbjct: 322 PAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSF 381
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F +M E+N++SW +I+G Q G EEAL F +K + P Y F + +C+ L L
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+ GRQ H VV++G ES + GN+LI MY +CG V+ +F M D +SWN
Sbjct: 442 KHGRQLHAQVVRYGY------ESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWN 495
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
AMI Q+G GT+A+ LF++ML G PD ++ + V+ ACSHAGLV+EGRKYF SM
Sbjct: 496 AMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV 555
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+G+ P ++HY ++DLL RAG EAK ++E+MP +P A IW +LLA C++H NI LG
Sbjct: 556 YGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIE 615
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
A++L E++P + G YVLLSNMYA G+W ++ +VRKLMR RGV K+PGCSWIE+ V+
Sbjct: 616 AAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675
Query: 642 VFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
F+V D HP ++IY L+ L EM+++GYVP+
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPD 709
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA + SC S+ R++HA++++ + S + N LI +YA+CG + A +F M
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALG 137
+ +WN++I L + G A LF M + D+ S+ +++S + E
Sbjct: 488 CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 138 YFVKMHS 144
YF MH+
Sbjct: 548 YFDSMHN 554
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 256/653 (39%), Positives = 385/653 (58%), Gaps = 29/653 (4%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ S +R+ S+ RV R+ + S N +I Y + G AR +FD+M +++
Sbjct: 66 ISSYMRTGRCSEALRVFKRMPRWSSVS----YNAMISGYLRNGEFELARMLFDEMPERDL 121
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+WN +I G ++ + A LF MPERD CSWN+++SG+AQ+ +A F +M +
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEK 181
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N + S+ + LSA + + +L SR + + + L+ + K ++ A
Sbjct: 182 N----DVSWNALLSAYVQNSKLEEA----CVLFGSRENWALVSWNCLLGGFVKKKKIVEA 233
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+ FD M+ R++VSWN++IT Y QNG +A ++F DE + V + A +
Sbjct: 234 RQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLF----------DESPVHDVFTWTAMV 283
Query: 266 AAFKEGLQIH-ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ + + + AR + + V NA++ Y + ++ A+ +FD MP RNV + +
Sbjct: 284 SGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNT 343
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++GYA+ + A+ +F KM +R+ VSW A+IAGY+Q+G + EAL LF L++RE
Sbjct: 344 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLN 403
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+F + L+ CA++ L+LG+Q H +VK G E+ FVGN+L+ MY KCGS+E+
Sbjct: 404 RSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEE 457
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M +D VSWN MI G +++G+G EAL F+ M G KPD TM+ VL ACSH
Sbjct: 458 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH 517
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV++GR+YF +M++++G+ P HY CMVDLLGRAG L+EA L++ MP +PDA IWG
Sbjct: 518 TGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWG 577
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL A +VH N L E A K+ +EP NSG YVLLSN+YA GRWG+V ++R MR +G
Sbjct: 578 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 637
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V K PG SWIEI + F V D+ HP EI+ L+ L MK+ GYV S
Sbjct: 638 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTS 690
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 142/329 (43%), Gaps = 52/329 (15%)
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+D+ N + Y + G+ +EA VF RMP + VS +M+SGY + + AR++F +M
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF-GNLLNACANLADLQLG 404
ER++VSWN +I GY +N +A LF + VC + G N C + A
Sbjct: 117 PERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFD 176
Query: 405 RQAHTHVVKHG----------------LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
R + V + F S E + N L+ ++K + + +
Sbjct: 177 RMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQF 236
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH--VTMIGVLCACSHAG 506
F++M RD VSWN +I G AQNG EA LF E P H T ++
Sbjct: 237 FDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD------ESPVHDVFTWTAMVSGYIQNR 290
Query: 507 LVEEGRKYFSSMSKEHGLA------------------------PLKDHYTCMVDLLGRAG 542
+VEE R+ F M + + ++ P ++ T + G A
Sbjct: 291 MVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQ 350
Query: 543 C--LDEAKTLIEAMPMQPDAVIWGSLLAA 569
C + EAK L + MP + D V W +++A
Sbjct: 351 CGKISEAKNLFDKMPKR-DPVSWAAMIAG 378
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ S F+ L +C ++ +++H R++K + + F+ N L+ +Y KCG + A +
Sbjct: 402 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 461
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRF 132
F +M+ K++ +WN++I G + GF ++A R F SM D + +++S +
Sbjct: 462 FKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLV 521
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGS 190
+ YF M ++++ + S AC + + G + H L+ + D +
Sbjct: 522 DKGRQYFHTM-TQDYGVRP---NSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWG 577
Query: 191 ALIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
L+ G A D M N + L Y +G D ++ VRM G
Sbjct: 578 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 637
Query: 248 IE 249
++
Sbjct: 638 VK 639
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/659 (37%), Positives = 366/659 (55%), Gaps = 43/659 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + R++H + +++ + LI +Y+KCG + A +VF K
Sbjct: 160 FLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK-- 217
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M ER+ SW +++ AQH + +EA + +
Sbjct: 218 -----------------------------MTERNVVSWTAIIQANAQHRKLNEAFELYEQ 248
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + +F S L++C G ++H+ +S+ +D+ + +ALI MY KC
Sbjct: 249 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNS 308
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG-----PASDALEVFVRMMASGIEPDEVTLA 256
V AR +FD M +R+++SW+++I Y Q+G + ++ RM G+ P++VT
Sbjct: 309 VQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFM 368
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC + A ++G QIHA L + D L A+ +MYAKCG + EA VF +M
Sbjct: 369 SILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMAN 427
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+NVV+ TS +S Y K + SA +F++M RNVVSWN +IAGY QNG+ + L +
Sbjct: 428 KNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSM 487
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
K E P T +L AC LA L+ G+ H VK GL ESD V SLI MY
Sbjct: 488 KAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGL------ESDTVVATSLIGMY 541
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V + +F+ M RD V+WNAM+ G Q+G G EA+ LFK+ML P+ +T+
Sbjct: 542 SKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLT 601
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
V+ ACS AGLV+EGR+ F M ++ + P K HY CMVDLLGRAG L EA+ I++MP
Sbjct: 602 AVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPC 661
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD +W +LL ACK H N+ L E A +LE+EPS + Y+ LSN+YA+ GRW + +V
Sbjct: 662 EPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKV 721
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R++M RG+ K G S IEI G ++ F+ +D HP I+ L+ LT+EMK GY P+
Sbjct: 722 RRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPD 780
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 171/633 (27%), Positives = 299/633 (47%), Gaps = 91/633 (14%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
++S+ + +++ C +++ D + VH ++ + +I++ N LI+ Y+K
Sbjct: 53 LVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSK--------- 103
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F+ +++ A ++F M RD +W+SM++ +A ++ ++A
Sbjct: 104 -FEDVAS---------------------AEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 141
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F +M N + +F S L AC + G ++H ++ +DV + +ALI M
Sbjct: 142 FDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITM 201
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG +S A VF M ERN+VSW ++I Q+ ++A E++ +M+ +GI P+ VT
Sbjct: 202 YSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTF 261
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++++C + A G +IH+ + L D+++ NAL+ MY KC + EAR +FDRM
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISE-RGLETDMIVANALITMYCKCNSVQEAREIFDRMS 320
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R+V+S ++M++GYA+ +GY +E L
Sbjct: 321 KRDVISWSAMIAGYAQ--------------------------SGYKDKESIDEVFQLLER 354
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF-------- 427
++RE V P TF ++L AC L+ GRQ H + K G ++ IF
Sbjct: 355 MRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGS 414
Query: 428 -----------------VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
S + MY+KCG + ++F M R+ VSWN MI G AQN
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQN 474
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G + L M G +PD VT+I +L AC +E G K + + + GL
Sbjct: 475 GDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVV 533
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE-- 588
T ++ + + G + EA+T+ + M + D V W ++LA H + + + K++L+
Sbjct: 534 ATSLIGMYSKCGQVAEARTVFDKMSNR-DTVAWNAMLAGYGQHGDGLEAVDLFKRMLKER 592
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+ P+ + L+ + + R G V R++ R
Sbjct: 593 VSPNE----ITLTAVISACSRAGLVQEGREIFR 621
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 228/443 (51%), Gaps = 45/443 (10%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R EA+ + ++ ++G + CA + F+ G VH L + D+Y+G+
Sbjct: 36 RLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGN 95
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+LI+ Y K V+ A +VF M R++V+W+S+I Y N + A + F RM + IEP
Sbjct: 96 SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T S++ AC + + ++G +IH +++ + D+ + AL+ MY+KCG+++ A V
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHT-IVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F +M RNVVS T+++ A+ + A ++ +ML+ AG
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ----------AG----------- 253
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+ P TF +LLN+C L GR+ H+H+ + GL E+D+ V N
Sbjct: 254 ----------ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL------ETDMIVAN 297
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG-----TEALGLFKKMLL 485
+LI MY KC SV++ IF+ M +RD +SW+AMI G AQ+GY E L ++M
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G P+ VT + +L AC+ G +E+GR+ + +SK G + T + ++ + G +
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIY 416
Query: 546 EAKTLIEAMPMQPDAVIWGSLLA 568
EA+ + M + V W S L+
Sbjct: 417 EAEQVFSKMA-NKNVVAWTSFLS 438
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 162/300 (54%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F + F +L +C ++ R++HA + K F + +Q + ++YAKCG +Y A +
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF KM+NKNV W S ++ +K G + A ++F+ MP R+ SWN M++G+AQ+ +
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
M +E F + + L AC + G VHA K SD + ++LI M
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG+V+ AR VFD M R+ V+WN+++ Y Q+G +A+++F RM+ + P+E+TL
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITL 600
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+SAC+ +EG +I + K+ +VD+ + G+L EA MP
Sbjct: 601 TAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMP 660
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 59/350 (16%)
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G EA+ L ++K+ + T+G ++ CA + G+ H + + G+ E
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV------E 88
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
DI++GNSLI+ Y K V ++F M RD V+W++MI A N + +A F++M
Sbjct: 89 IDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 148
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG- 542
+P+ +T + +L AC++ ++E+GRK ++ K G+ T ++ + + G
Sbjct: 149 TDANIEPNRITFLSILKACNNYSILEKGRK-IHTIVKAMGMETDVAVATALITMYSKCGE 207
Query: 543 ----C--------------------------LDEAKTLIEAM---PMQPDAVIWGSLLAA 569
C L+EA L E M + P+AV + SLL +
Sbjct: 208 ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS 267
Query: 570 CK----VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
C ++R + +++++ LE + + + MY + E + M KR V
Sbjct: 268 CNTPEALNRGRRIHSHISERGLETDMIVANALI---TMYCKCNSVQEAREIFDRMSKRDV 324
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ SW ++ KDK + I V ++L R M+R G PN
Sbjct: 325 I-----SWSAMIAGYAQSGYKDK-----ESIDEVFQLLER-MRREGVFPN 363
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/709 (36%), Positives = 403/709 (56%), Gaps = 59/709 (8%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
S S R VHA +I S F NRL+++Y K + AR++F+++ N + ++IT
Sbjct: 28 SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87
Query: 94 GLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
G ++ +F P RD +N+M++G+A + AL F M ++F +
Sbjct: 88 AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147
Query: 152 YSFGSALSACAGSV-DFKMGTQVHALLSKSR---YSSDVYMGSALIDMYGK--------C 199
++F S LSA V + + Q+H + K+ SS V +AL+ +Y K C
Sbjct: 148 FTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL--NALLSVYVKRASELGIPC 205
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS------------- 246
+ AR++FD M +R+ ++W ++IT Y +N + A EVF M+ +
Sbjct: 206 SAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265
Query: 247 ------------------GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND- 287
GI+ D++T +++SACA++ +F+ G Q+HA +++ E N
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHS 325
Query: 288 --LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
L + NAL+ +Y K K++EAR +F MP+RN+++ +++SGY A ++ A+ F +M
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+N+++ +I+G QNG +E L LF+ ++ + P + F L AC+ L L+ GR
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGR 445
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H +V G ES + VGN++I MY KCG VE +F TM D VSWN+MI
Sbjct: 446 QLHAQLVHLGY------ESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIA 499
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
Q+G+G +A+ LF +ML G PD +T + VL ACSHAGLVE+GR YF+SM + +G+
Sbjct: 500 ALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGIT 559
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +DHY MVDL RAG A+ +I++MP +P A +W +LLA C++H N+ LG A++
Sbjct: 560 PCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQ 619
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L ++ P N G YVLLSN+YA++GRW +V +VRKLMR + V K+P CSWIE+ V+VFMV
Sbjct: 620 LFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMV 679
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS---DDEAYEEQNGSNST 691
D HP +Y L+ L EMK++GY+P+ D YE++ + ST
Sbjct: 680 DDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALST 728
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 33/205 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA L +C ++ + R++HA+++ + S + + N +I +YAKCG + A VF M
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ ++ +WNS+I L QH +A+ F +
Sbjct: 488 SVDLVSWNSMIAAL-------------------------------GQHGHGVKAIELFDQ 516
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCG 200
M E +F + L+AC+ + + G +++L + + ++D++ + G
Sbjct: 517 MLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAG 576
Query: 201 RVSCARRVFDGMRER-NIVSWNSLI 224
S AR V D M + W +L+
Sbjct: 577 MFSYARIVIDSMPSKPGAPVWEALL 601
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/656 (38%), Positives = 376/656 (57%), Gaps = 40/656 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL +C+ + +S + +H+ IKS + N I +Y+KCG L ARK F +S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF++N+II K A +LF +PE D S+N+++S +A + ALG F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++ + ++AC D + Q+H++ S + S V + +AL+ YGK G
Sbjct: 131 MREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+RVF GM R+ VSWNS+I Y Q+ S AL +F M+ G+ D TLASV++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A L GLQ H +L++ +N V G+ L+D+Y+KCG
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHV-GSGLIDLYSKCG------------------ 289
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN-EEALGLFRLLKRE 379
+ R +F ++ E ++V WN +++GY+QN E E+AL FR ++
Sbjct: 290 ------------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P +F +++AC+NL+ G+Q H+ +K + + I V N+LI MY KC
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI-----PSNRISVDNALIAMYSKC 392
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G+++D R+F+ M E + VS N+MI G AQ+G E+L LF+ ML P +T I VL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G VEEG YF+ M ++ + P +HY+CM+DLLGRAG L EA+ LI MP P
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
++ W SLL AC+ H NI L A ++L++EPSN+ PYV+LSNMYA GRW EV VRK
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
MR RGV K+PGCSWIE+ ++VF+ +D HP+ KEIY L+ ++ +MKR GYVP+
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/656 (38%), Positives = 376/656 (57%), Gaps = 40/656 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL +C+ + +S + +H+ IKS + N I +Y+KCG L ARK F +S
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF++N+II K A +LF +PE D S+N+++S +A + ALG F
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++ + ++AC D + Q+H++ S + S V + +AL+ YGK G
Sbjct: 131 MREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+RVF GM R+ VSWNS+I Y Q+ S AL +F M+ G+ D TLASV++
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A L GLQ H +L++ +N V G+ L+D+Y+KCG
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHV-GSGLIDLYSKCG------------------ 289
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN-EEALGLFRLLKRE 379
+ R +F ++ E ++V WN +++GY+QN E E+AL FR ++
Sbjct: 290 ------------GGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGI 337
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P +F +++AC+NL+ G+Q H+ +K + + I V N+LI MY KC
Sbjct: 338 GYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDI-----PSNRISVDNALIAMYSKC 392
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G+++D R+F+ M E + VS N+MI G AQ+G E+L LF+ ML P +T I VL
Sbjct: 393 GNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G VEEG YF+ M ++ + P +HY+CM+DLLGRAG L EA+ LI MP P
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
++ W SLL AC+ H NI L A ++L++EPSN+ PYV+LSNMYA GRW EV VRK
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKF 572
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
MR RGV K+PGCSWIE+ ++VF+ +D HP+ KEIY L+ ++ +MKR GYVP+
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPD 628
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/637 (37%), Positives = 369/637 (57%), Gaps = 69/637 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ VH+ I+ + S++ + L+ +YAKCG R+VF+K+ N
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN---------------- 408
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
RD +WN+M+ G A+ + EA + +M E ++ ++ L
Sbjct: 409 ---------------RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILL 453
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+AC G ++H+ + K + D+ + +ALI MY +CG + AR +F+ M ++I+
Sbjct: 454 NACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDII 513
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW ++I ++G ++AL VF M +G++P+ VT S+++AC+S AA G +IH ++
Sbjct: 514 SWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ L D + N LV+MY+ CG SVK A
Sbjct: 574 IEA-GLATDAHVANTLVNMYSMCG-------------------------------SVKDA 601
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F +M +R++V++NA+I GY + +EAL LF L+ E + P T+ N+LNACAN
Sbjct: 602 RQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 661
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L+ ++ H+ V+K G +LS D +GN+L+ Y KCGS D +F+ M++R+ +
Sbjct: 662 GSLEWAKEIHSLVLKDG--YLS----DTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVI 715
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I GCAQ+G G + L LF++M + G KPD VT + +L ACSHAGL+EEGR+YF SM
Sbjct: 716 SWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 775
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
S++ G+ P +HY CMVDLLGRAG LDE + LI+ MP Q + IWG+LL AC++H N+ +
Sbjct: 776 SRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPV 835
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E A+ L+++P N+ YV LS+MYA G W ++RKLM +RGV K+PG SWIE+
Sbjct: 836 AERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGD 895
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++ F+ +D+ HP +++IY L LT MK GYVP+
Sbjct: 896 KLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPD 932
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/616 (29%), Positives = 298/616 (48%), Gaps = 80/616 (12%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A ++S + K+L C+ K + R VH II+ + + N LI++Y +CG + AR
Sbjct: 137 ARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEAR 196
Query: 75 KVFDKMSN--KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
+V++K+++ + V +WN+++ G +++G+I++A +L M QH
Sbjct: 197 QVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQ---------------QH--- 238
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
AL + LS+C + G ++H K+R DV + + +
Sbjct: 239 -------------GLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCI 285
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
++MY KCG + AR VFD M +++VSW +I Y G + A E+F +M G+ P+
Sbjct: 286 LNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNR 345
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T +V++A + AA K G +H+ ++ +DL +G ALV MYAKCG + R VF+
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGH-ESDLAVGTALVKMYAKCGSYKDCRQVFE 404
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++ R++++ +M+ G A + G EEA +
Sbjct: 405 KLVNRDLIAWNTMIGGLA-------------------------------EGGNWEEASEI 433
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ ++RE + P T+ LLNAC N L GR+ H+ VVK G F DI V N+L
Sbjct: 434 YHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF------DISVQNAL 487
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
I MY +CGS++D +F MV +D +SW AMI G A++G G EAL +F+ M G KP+
Sbjct: 488 ISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNR 547
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT +L ACS ++ GR+ + E GLA +V++ G + +A+ + +
Sbjct: 548 VTYTSILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVFD 606
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP----YVLLSNMYAELG 608
M Q D V + +++ H LG+ K ++ P Y+ + N A G
Sbjct: 607 RMT-QRDIVAYNAMIGGYAAHN---LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 609 RWGEVVRVRKLMRKRG 624
+ L+ K G
Sbjct: 663 SLEWAKEIHSLVLKDG 678
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 154/296 (52%), Gaps = 31/296 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L++C ++ RR+H ++I++ A++ + N L+++Y+ CG + AR+VFD+M+
Sbjct: 550 YTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT 609
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ +N +M+ G+A H+ EAL F +
Sbjct: 610 QRDIVAYN-------------------------------AMIGGYAAHNLGKEALKLFDR 638
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E + ++ + L+ACA S + ++H+L+ K Y SD +G+AL+ Y KCG
Sbjct: 639 LQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGS 698
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
S A VFD M +RN++SWN++I Q+G D L++F RM GI+PD VT S++SA
Sbjct: 699 FSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSA 758
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
C+ +EG + + R + + +VD+ + G+L+E + MP +
Sbjct: 759 CSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQ 814
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 17/255 (6%)
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+ A+ + + L+++ + +L C + DL GR+ H H+++H D
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVL------DQ 176
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETM--VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ N+LI+MY++CGS+E+ +++ + ER SWNAM+VG Q GY EAL L ++M
Sbjct: 177 YTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQ 236
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G T + +L +C +E GR+ K L + + C++++ + G +
Sbjct: 237 QHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDV-NVANCILNMYAKCGSI 295
Query: 545 DEAKTLIEAMPMQPDAVIWGSLL---AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
EA+ + + M + V W ++ A C H I E K E N Y+ +
Sbjct: 296 HEAREVFDKMETKS-VVSWTIIIGGYADCG-HSEIAF-EIFQKMQQEGVVPNRITYINVL 352
Query: 602 NMYAELG--RWGEVV 614
N ++ +WG+ V
Sbjct: 353 NAFSGPAALKWGKTV 367
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L++C S S+ + +H+ ++K + S+ + N L+ YAKCG A VF
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVF 706
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
DKM +NV +WN+II G + G D +LF M + D ++ S++S +
Sbjct: 707 DKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLE 766
Query: 134 EALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
E YF M S +F ++ Y L AG +D +V AL+ + ++ +
Sbjct: 767 EGRRYFCSM-SRDFGITPTIEHYGCMVDLLGRAGQLD-----EVEALIKTMPFQANTRIW 820
Query: 190 SALIDMYGKCGRVSCARR 207
AL+ G V A R
Sbjct: 821 GALLGACRIHGNVPVAER 838
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/697 (36%), Positives = 390/697 (55%), Gaps = 53/697 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F + +C SV R++H +IK +F I++ N LID+Y KCG L A+KV
Sbjct: 158 LDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKV 217
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ-----CSWNSMVSGFAQHDR 131
KM ++ TWNS+IT G + +A M D SW++++ GFAQ+
Sbjct: 218 LVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGY 277
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
EA+ +M E + + L ACA +G Q+H +++ + S+ + +A
Sbjct: 278 DEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNA 337
Query: 192 LIDMYGKCGR-------------------------------VSCARRVFDGMR----ERN 216
L+D+Y +CG VS A+ +FD M ER
Sbjct: 338 LVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERG 397
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++SWNS+I+ Y +N +A +F M M GIEPD TL SV++ACA + ++G +IH
Sbjct: 398 LISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIH 457
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A+ + + L++D +G ALV+MY+KC L A+ FD + ++V + +++SGY +++ +
Sbjct: 458 AQAI-VKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQI 516
Query: 336 KSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ + + KM N+ +WN+++AG +N + + + LF ++ + P YT G +
Sbjct: 517 ERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGII 576
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L AC+ LA L+ G+QAH H +K G ++D+ +G +L+DMY KCGS++ ++
Sbjct: 577 LPACSRLATLERGKQAHAHSIK------CGYDTDVHIGAALVDMYAKCGSLKYAQLAYDR 630
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ + VS NAM+ CA +G+G E + LF+ ML G PDHVT + VL +C H G VE G
Sbjct: 631 ISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETG 690
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++F M + + P HYT MVDLL R+G L EA LI+ MP++ D+V+WG+LL C
Sbjct: 691 CEFFDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCV 749
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
H NI LGE A++L+E+EP+NSG YVLL+N++A RW ++ RVR +M+ RG+ K PGC
Sbjct: 750 THGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGC 809
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
SWIE ++ F+ D+ H +EIY L L MK
Sbjct: 810 SWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMK 846
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/633 (29%), Positives = 303/633 (47%), Gaps = 119/633 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++S +A +LDSC K ++VHA IK+ F ++ FI +L+ +YA+CG L
Sbjct: 60 LNTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLL------ 110
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DA LF +MP R+ SW +++S + H F EA
Sbjct: 111 -------------------------KDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAF 145
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + + L + F AC+G ++G Q+H L+ K R+ ++Y+ +ALIDMY
Sbjct: 146 LLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMY 205
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITC------------------------------ 226
GKCG + A++V M ER+ V+WNS+IT
Sbjct: 206 GKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265
Query: 227 ------YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ QNG +A+E+ RM G+ P+ TLA V+ ACA L G Q+H + R
Sbjct: 266 SAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR 325
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ + N +V+ NALVD+Y +CG + A +F + ++NV+S +M+ GY ++ V A+
Sbjct: 326 HDFISNPVVV-NALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKE 384
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNAC 395
+F M +ER ++SWN++I+GY +N +EA +F+ +L E + P +T G++L AC
Sbjct: 385 LFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTAC 444
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+ L+ G++ H + GL +SD FVG +L++MY KC + F+ ++E+
Sbjct: 445 ADTISLRQGKEIHAQAIVKGL------QSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEK 498
Query: 456 DWVSWNAMIVGCAQ----------------NGYGTE-------------------ALGLF 480
D +WNA+I G + +GY + LF
Sbjct: 499 DVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLF 558
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+M + +PD T+ +L ACS +E G++ + S + G +VD+ +
Sbjct: 559 SEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAH-SIKCGYDTDVHIGAALVDMYAK 617
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
G L A+ + + P+ V ++L AC +H
Sbjct: 618 CGSLKYAQLAYDRIS-NPNLVSHNAMLTACAMH 649
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 136/483 (28%), Positives = 234/483 (48%), Gaps = 53/483 (10%)
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+N L+ + S L +C K+G QVHA K+ + +D ++ + L+ MY +CG +
Sbjct: 56 DNKPLNTSKYASVLDSCKCP---KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKD 112
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +F+ M RN+ SW ++++ Y +G +A +F + G+E D V AC+
Sbjct: 113 ADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSG 172
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + + G Q+H +++ N + + NAL+DMY KCG L++A+ V +MP R+ V+ S
Sbjct: 173 LGSVELGRQLHGLVIKFRFCLN-IYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNS 231
Query: 325 MVSGYAKASSVKSARLMFTKMLE-----RNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+++ A V A KM NVVSW+A+I G+ QNG +EEA+ + ++ E
Sbjct: 232 VITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVE 291
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P T +L ACA L L LG+Q H ++ +H S+ V N+L+D+Y +C
Sbjct: 292 GLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFI------SNPVVVNALVDVYRRC 345
Query: 440 GSVEDGCRIF-----------ETM------------------------VERDWVSWNAMI 464
G + +IF TM +ER +SWN++I
Sbjct: 346 GDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSII 405
Query: 465 VGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
G +N EA +F+ ML+ G +PD T+ VL AC+ + +G++ + + G
Sbjct: 406 SGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKE-IHAQAIVKG 464
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
L +V++ + L A+ + + M+ D W +L++ I +Y+
Sbjct: 465 LQSDTFVGGALVEMYSKCQDLTAAQVAFDEV-MEKDVPTWNALISGYTRSNQIERIQYLL 523
Query: 584 KKL 586
+K+
Sbjct: 524 EKM 526
>gi|356532255|ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Glycine max]
Length = 948
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 228/632 (36%), Positives = 371/632 (58%), Gaps = 42/632 (6%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++HA +IK ++ IQN L+D+Y KCG + A VF + + ++F WNS+I G +
Sbjct: 163 QLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLY 222
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+A +F MP+ D SWN+++S F+Q+ L +V+M + F + ++GS LS
Sbjct: 223 GPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTYVEMCNLGFKPNFMTYGSVLS 282
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
ACA D K G +HA + + +S D ++GS LIDMY KCG ++ ARRVF+ + E+N VS
Sbjct: 283 ACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVS 342
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W LI+ Q G DAL +F +M + + DE TL +++ C+ G +H +
Sbjct: 343 WTCLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHGYAI 402
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ + + + +GNA++ MYA+CG +A F MP+R+ +S T+M++ +++ + AR
Sbjct: 403 K-NGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRAR 461
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F ERNV++WN++++ Y Q+G +EE + L+ L++ ++V P TF + ACA+LA
Sbjct: 462 QCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLA 521
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
++LG Q +HV K GL SD+ V NS++ MY +CG +++ ++F+++ ++ +S
Sbjct: 522 TIKLGTQVVSHVTKFGL------SSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLIS 575
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNAM+ AQNG G +A+ ++ ML KPDH++ + VL
Sbjct: 576 WNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS------------------- 616
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
DLLGRAG LD+AK LI+ MP +P+A +WG+LL AC++H + +L
Sbjct: 617 ----------------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILA 660
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
+ AKKL+E+ +SG YVLL+N+Y E G V +RKLM+ +G+ K PGCSWIE+
Sbjct: 661 KTAAKKLMELNVEDSGGYVLLANIYTESGELENVADMRKLMKVKGIRKSPGCSWIEVDNR 720
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
++VF V + HP E+Y+ L+ + ++++ G
Sbjct: 721 LHVFTVDETSHPQINEVYVKLEEMMKKIEDTG 752
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 181/671 (26%), Positives = 306/671 (45%), Gaps = 116/671 (17%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R++HA++I S + +F+ N L+ +Y+ CG + A VF + ++ N+FTWN+++
Sbjct: 24 RKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFDS 83
Query: 99 GFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSE---Y 152
G + +A LF MP RD SW +M+SG+ Q+ + ++ F+ M N + +
Sbjct: 84 GRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPF 143
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR------ 206
S+ + AC + Q+HA + K + + ++L+DMY KCG ++ A
Sbjct: 144 SYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNI 203
Query: 207 -------------------------RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
VF M + + VSWN+LI+ + Q G L +V
Sbjct: 204 ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTYV 263
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M G +P+ +T SV+SACAS++ K G +HAR++R E D LG+ L+DMYAKC
Sbjct: 264 EMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEH-SLDAFLGSGLIDMYAKC 322
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G L AR VF+ + +N VS T ++SG A
Sbjct: 323 GCLALARRVFNSLGEQNQVSWTCLISGVA------------------------------- 351
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q G ++AL LF +++ SV +T +L C+ G H + +K+G+
Sbjct: 352 QFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHGYAIKNGM----- 406
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN----------- 470
+S + VGN++I MY +CG E F +M RD +SW AMI +QN
Sbjct: 407 -DSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFD 465
Query: 471 --------------------GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
G+ E + L+ M KPD VT + AC+ ++
Sbjct: 466 MTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKL 525
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G + S ++K GL+ +V + R G + EA+ + +++ ++ + + W +++AA
Sbjct: 526 GTQVVSHVTK-FGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVK-NLISWNAMMAAF 583
Query: 571 KVH--RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+ N + Y E +P + +LS++ LGR G + + + L+ G+ +
Sbjct: 584 AQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL---LGRAGLLDQAKNLI--DGMPFK 638
Query: 629 PGCS-WIEILG 638
P + W +LG
Sbjct: 639 PNATVWGALLG 649
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 198/418 (47%), Gaps = 107/418 (25%)
Query: 22 FAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ +L +C S+SD + +HARI++ + + + F+ + LID+YAKCGCL AR+VF+
Sbjct: 277 YGSVLSAC---ASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFN 333
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ +N +W +I+G+ ++G DD AL
Sbjct: 334 SLGEQNQVSWTCLISGVAQFGLGDD-------------------------------ALAL 362
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M + L E++ + L C+G G +H K+ S V +G+A+I MY +
Sbjct: 363 FNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGNAIITMYAR 422
Query: 199 C-------------------------------GRVSCARRVFDGMRERNIVSWNSLITCY 227
C G + AR+ FD ERN+++WNS+++ Y
Sbjct: 423 CGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMTPERNVITWNSMLSTY 482
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
Q+G + + ++++V M + ++PD VT A+ + ACA LA K G Q+ + + + L +D
Sbjct: 483 IQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKF-GLSSD 541
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ + N++V MY++CG++ EAR VFD + ++N
Sbjct: 542 VSVANSIVTMYSRCGQIKEARKVFDSIHVKN----------------------------- 572
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
++SWNA++A + QNG +A+ + + R P H ++ A L+DL LGR
Sbjct: 573 --LISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISY------VAVLSDL-LGR 621
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 39/369 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD +L C + +H IK+ S + + N +I +YA+CG A
Sbjct: 373 LDEFTLVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLA 432
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M ++ +W ++IT + G ID A + F PER+ +WNSM+S + QH E +
Sbjct: 433 FRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEGM 492
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V M S+ +F +++ ACA K+GTQV + ++K SSDV + ++++ MY
Sbjct: 493 KLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMY 552
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG++ AR+VFD + +N++SWN+++ + QNG + A+E + M+ + +PD ++
Sbjct: 553 SRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYV 612
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+S D+ + G L++A+ + D MP
Sbjct: 613 AVLS-----------------------------------DLLGRAGLLDQAKNLIDGMPF 637
Query: 317 R-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS---WNALIAGYTQNGENEEALGL 372
+ N +++ A+ K++E NV + L YT++GE E +
Sbjct: 638 KPNATVWGALLGACRIHHDSILAKTAAKKLMELNVEDSGGYVLLANIYTESGELENVADM 697
Query: 373 FRLLKRESV 381
+L+K + +
Sbjct: 698 RKLMKVKGI 706
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 387/673 (57%), Gaps = 42/673 (6%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ P LL++C +S+ ++VH + IK + +QNR++ C C +
Sbjct: 18 THPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTF---C-CTH------- 63
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++G A RLF +PE + WN+M+ G+++ D +
Sbjct: 64 ------------------EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSL 105
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+++M Y+F + + G Q+H + K +V++ +AL+ MY
Sbjct: 106 YLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLL 165
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG++ AR VFD + ++++WN +I+ Y + G ++ +F+ M + P VTL V
Sbjct: 166 CGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 225
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SAC+ L + G ++H+ + C K+ ++LVL NA++DMYA CG+++ A +F M R+
Sbjct: 226 LSACSKLKDLRTGKKVHSYVKNC-KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 284
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
++S T++VSG+ + AR F KM E++ VSW A+I GY ++ +EAL LFR ++
Sbjct: 285 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+V P +T ++L ACA+L L+LG T++ ++ ++ +D+FV N+LIDMY K
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK------NDLFVRNALIDMYFK 398
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG V+ IF M +RD +W AMIVG A NG+G +AL +F ML PD +T IGV
Sbjct: 399 CGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGV 458
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+H GLV++GRKYF M+ +HG+ P HY C+VDLL RAG L EA +IE MP++
Sbjct: 459 LSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 518
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
++++WG+LLA C+V+R + E V K++LE+EP N YVLL N+YA RW ++ +R+
Sbjct: 519 NSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQ 578
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+M +G+ K PGCS IE+ G V+ F+ D+ HP K I L +T+++K GY P+ S+
Sbjct: 579 MMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISE 638
Query: 679 ---DEAYEEQNGS 688
D A E++ S
Sbjct: 639 VFLDIAEEDKENS 651
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 232/534 (43%), Gaps = 110/534 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L R ++ R++H ++K +F+ L+ +Y CG L AR VF
Sbjct: 117 DRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF 176
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +V TWN II+ K G +++ RLF M ++
Sbjct: 177 DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLP------------------- 217
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + LSAC+ D + G +VH+ + + S++ + +A+IDMY
Sbjct: 218 ------------TTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
C G + AR FD M E++ VSW ++I
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y ++ +ALE+F M A+ ++PDE T+ SV++ACA L A + G I + R K++N
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR-NKIKN 384
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
DL + NAL+DMY KCG +++A +F M R+ + T+M+ G A
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA---------------- 428
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG E+AL +F + + S+ P T+ +L+AC + + GR
Sbjct: 429 ---------------VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGR- 472
Query: 407 AHTHVVKHGLRFLS--GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
K+ LR S G E +I L+D+ + G +++ + E M ++ + + W A+
Sbjct: 473 ------KYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 526
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC----ACSHAGLVEEGRK 513
+ GC A + K++L +PD+ + +LC AC + E R+
Sbjct: 527 LAGCRVYRESDMAEMVVKQILEL--EPDNGAVYVLLCNIYAACKRWNDLRELRQ 578
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/658 (37%), Positives = 371/658 (56%), Gaps = 69/658 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +++ C + R++H +IK + S+ F N L+D+YAK G
Sbjct: 114 LSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVG------------- 160
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++DAS +F + + D SWN++++G H+ AL +
Sbjct: 161 ------------------ILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLRE 202
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M+ + ++ SAL ACAG ++G Q+H+ L K SD ++G LIDMY KC
Sbjct: 203 MNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNS 262
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VF M ER++++WN++I+ + QN +A +F M GI ++ TL++V+ +
Sbjct: 263 MDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A+L A QIHA ++ D + N+L+D Y KCG + +A VF+ PI ++V
Sbjct: 323 IAALQANYMCRQIHALSLK-SGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLV- 380
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+FT +L+ Y Q+G+ EEAL L+ ++ +
Sbjct: 381 -------------------LFT-----------SLVTAYAQDGQGEEALRLYLEMQDRGI 410
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + +LLNACA+L+ + G+Q H H++K G SDIF GNSL++MY KCGS
Sbjct: 411 KPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFM------SDIFAGNSLVNMYAKCGS 464
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ED F + R VSW+AMI G AQ+GYG EAL LFK+ML G P+H+T++ VLCA
Sbjct: 465 IEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCA 524
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGLV E + YF+SM G+ P+++HY CM+DLLGRAG L+ A L+ MP Q +A+
Sbjct: 525 CNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANAL 584
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++H+NI LGE A+ LL +EP SG +VLL+N+YA +G W +V RVR+LM+
Sbjct: 585 VWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMK 644
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
V K+PG SW+E+ V F+V D+ H + EIY L L+ +K+ GYVP D
Sbjct: 645 DGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEID 702
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 268/554 (48%), Gaps = 75/554 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C +K + ++VH ++ + F S+ F+ N L+ +YAKCG
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCG------------- 59
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
GF DA LF ++P+R SWN++ S + D EA+ F
Sbjct: 60 -----------------GF-GDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHD 101
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E+S S ++ C G D G ++H L K Y SD + +AL+DMY K G
Sbjct: 102 MVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGI 161
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VFD + + +IVSWN++I + ALE+ M SG+ P+ TL+S + A
Sbjct: 162 LEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKA 221
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA +A + G Q+H+ L++ + + +D LG L+DMY+KC +++AR VF MP R+++
Sbjct: 222 CAGMALRELGRQLHSSLIKMD-MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMI- 279
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+WNA+I+G++QN E+EEA LF L+ E +
Sbjct: 280 ------------------------------AWNAVISGHSQNEEDEEAASLFPLMHTEGI 309
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T +L + A L + RQ H +K G F D +V NSLID Y KCG
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF------DNYVVNSLIDTYGKCGH 363
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VED R+FE D V + +++ AQ+G G EAL L+ +M G KPD +L A
Sbjct: 364 VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
C+ E+G++ + K + D + +V++ + G +++A +P++
Sbjct: 424 CASLSAYEQGKQVHVHILK---FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-G 479
Query: 560 AVIWGSLLAACKVH 573
V W +++ H
Sbjct: 480 IVSWSAMIGGLAQH 493
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 272/573 (47%), Gaps = 98/573 (17%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH +E++F S L AC + D +G QVH ++ + + SD ++ ++L+ +Y KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
AR +FD + +R++VSWN+L +CY + +A+ +F M+ SGI P+E +L+S+++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L +G +IH L++ +D NALVDMYAK G L +A VFD +
Sbjct: 121 CTGLEDSVQGRKIHGYLIKL-GYDSDAFSANALVDMYAKVGILEDASSVFDEIA------ 173
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ ++VSWNA+IAG + + AL L R + + +
Sbjct: 174 -------------------------KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGM 208
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
CP +T + L ACA +A +LGRQ H+ ++K + SD F+G LIDMY KC S
Sbjct: 209 CPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG------SDSFLGVGLIDMYSKCNS 262
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL-- 499
++D +F+ M ERD ++WNA+I G +QN EA LF M G + T+ VL
Sbjct: 263 MDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKS 322
Query: 500 ---------CACSHAGLVEEGRKY----FSSMSKEHGL-------------APLKD--HY 531
C HA ++ G ++ +S+ +G +P+ D +
Sbjct: 323 IAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLF 382
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL- 587
T +V + G +EA L M ++PD+ + SLL AC G+ V +L
Sbjct: 383 TSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 588 -----EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
+I NS L NMYA+ G + + RG+V SW ++G +
Sbjct: 443 FGFMSDIFAGNS-----LVNMYAKCGSIEDASCAFSRIPVRGIV-----SWSAMIGGL-- 490
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+H KE L ++M +VG PN
Sbjct: 491 -----AQHGYGKEAL----QLFKQMLKVGVPPN 514
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + LL++C + ++VH I+K F S+IF N L+++YAKCG + A F
Sbjct: 413 DSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
++ + + +W+++I GL + G+ +A +LF M
Sbjct: 473 SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQM 506
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/658 (36%), Positives = 369/658 (56%), Gaps = 69/658 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F LL C R +S+ R VHA I+KS +++N L+ +YAKCG L
Sbjct: 96 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSL-------- 147
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
DA R+F + +R+ SW +M+ F ++ EA
Sbjct: 148 -----------------------TDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKC 184
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ M + +F S L+A ++G +VH ++K+ + +G++L+ MY K
Sbjct: 185 YETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAK 244
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG +S A+ +FD + E+N+V+W LI Y Q G ALE+ +M + + P+++T S+
Sbjct: 245 CGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSI 304
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ C + A + G ++H +++ R V+ NAL+ MY KCG L E
Sbjct: 305 LQGCTTPLALEHGKKVHRYIIQSGYGREIWVV-NALITMYCKCGGLKE------------ 351
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
AR +F + R+VV+W A++ GY Q G ++EA+ LFR +++
Sbjct: 352 -------------------ARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ + P TF + L +C++ A LQ G+ H +V G D+++ ++L+ MY K
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL------DVYLQSALVSMYAK 446
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CGS++D +F M ER+ V+W AMI GCAQ+G EAL F++M G KPD VT V
Sbjct: 447 CGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSV 506
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+H GLVEEGRK+F SM ++G+ P+ +HY+C VDLLGRAG L+EA+ +I MP QP
Sbjct: 507 LSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQP 566
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+WG+LL+AC++H ++ GE A+ +L+++P + G YV LSN+YA GR+ + +VR+
Sbjct: 567 GPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQ 626
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+M KR VVK+PG SWIE+ G V+VF V+DK HP KEIY L LT ++K GYVP+
Sbjct: 627 VMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDT 684
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 235/478 (49%), Gaps = 76/478 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL++ + + ++VH I K+ E + L+ +YAKCG + A+ +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK+ KNV TW +I G +AQ + AL
Sbjct: 256 DKLPEKNVVTWTLLIAG-------------------------------YAQQGQVDVALE 284
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
KM A ++ ++ S L C + + G +VH + +S Y ++++ +ALI MY
Sbjct: 285 LLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYC 344
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR++F + R++V+W +++T Y Q G +A+++F RM GI+PD++T S
Sbjct: 345 KCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTS 404
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++C+S A +EG IH +L+ D+ L +ALV MYAKCG +++AR VF++M R
Sbjct: 405 ALTSCSSPAFLQEGKSIHQQLVHA-GYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER 463
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLF 373
NVV+ T+M++G A+ + A F +M ++ + V++ ++++ T G EE F
Sbjct: 464 NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHF 523
Query: 374 R--------------------LLKR-------ESVC------PTHYTFGNLLNACANLAD 400
R LL R E+V P +G LL+AC +D
Sbjct: 524 RSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSD 583
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
++ G +A +V+K L ++ +V +L ++Y G ED ++ + M +RD V
Sbjct: 584 VERGERAAENVLK-----LDPDDDGAYV--ALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 189/450 (42%), Gaps = 72/450 (16%)
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
G R+ + ++ + ++ + G +AL + M+ G ++ CA L + ++
Sbjct: 55 GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ 114
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G ++HA +++ ++ + L N L+ MYAKCG L +AR VFD + RN+
Sbjct: 115 GREVHAAILK-SGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNI----------- 162
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
VSW A+I + +N EA + +K P TF +
Sbjct: 163 --------------------VSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVS 202
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LLNA N LQ+G++ H + K GL E + VG SL+ MY KCG + IF+
Sbjct: 203 LLNAFTNPELLQVGQKVHMEIAKAGL------ELEPRVGTSLVGMYAKCGDISKAQVIFD 256
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ E++ V+W +I G AQ G AL L +KM P+ +T +L C+ +E
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 511 GRKY----------------------------FSSMSKEHGLAPLKD--HYTCMVDLLGR 540
G+K K G P +D +T MV +
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 541 AGCLDEAKTLIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGP 596
G DEA L M Q PD + + S L +C + G+ + ++L+ S +
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L +MYA+ G + V M +R VV
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMSERNVV 466
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 102/323 (31%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L SC + + + +H +++ + ++ ++++Q+ L+ +YAKCG + AR VF
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVF 457
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++MS +NV W ++ITG AQH R EAL
Sbjct: 458 NQMSERNVVAWTAMITGC-------------------------------AQHGRCREALE 486
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG-------- 189
YF +M + + +F S LSAC T V + ++ +Y+
Sbjct: 487 YFEQMKKQGIKPDKVTFTSVLSAC---------THVGLVEEGRKHFRSMYLDYGIKPMVE 537
Query: 190 --SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
S +D+ G+ G + A N ++T Q GP+
Sbjct: 538 HYSCFVDLLGRAGHLEEAE--------------NVILTMPFQPGPS-------------- 569
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN--------ALVDMYA 299
+++SAC +IH+ + R E+ +++ + AL ++YA
Sbjct: 570 ------VWGALLSAC----------RIHSDVERGERAAENVLKLDPDDDGAYVALSNIYA 613
Query: 300 KCGKLNEARCVFDRMPIRNVVSE 322
G+ +A V M R+VV E
Sbjct: 614 AAGRYEDAEKVRQVMEKRDVVKE 636
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 387/673 (57%), Gaps = 42/673 (6%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ P LL++C +S+ ++VH + IK + +QNR++ C C +
Sbjct: 39 THPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTF---C-CTH------- 84
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++G A RLF +PE + WN+M+ G+++ D +
Sbjct: 85 ------------------EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSL 126
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+++M Y+F + + G Q+H + K +V++ +AL+ MY
Sbjct: 127 YLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLL 186
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG++ AR VFD + ++++WN +I+ Y + G ++ +F+ M + P VTL V
Sbjct: 187 CGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLV 246
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SAC+ L + G ++H+ + C K+ ++LVL NA++DMYA CG+++ A +F M R+
Sbjct: 247 LSACSKLKDLRTGKKVHSYVKNC-KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRD 305
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
++S T++VSG+ + AR F KM E++ VSW A+I GY ++ +EAL LFR ++
Sbjct: 306 IISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+V P +T ++L ACA+L L+LG T++ ++ ++ +D+FV N+LIDMY K
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK------NDLFVRNALIDMYFK 419
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG V+ IF M +RD +W AMIVG A NG+G +AL +F ML PD +T IGV
Sbjct: 420 CGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGV 479
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+H GLV++GRKYF M+ +HG+ P HY C+VDLL RAG L EA +IE MP++
Sbjct: 480 LSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 539
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
++++WG+LLA C+V+R + E V K++LE+EP N YVLL N+YA RW ++ +R+
Sbjct: 540 NSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQ 599
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+M +G+ K PGCS IE+ G V+ F+ D+ HP K I L +T+++K GY P+ S+
Sbjct: 600 MMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISE 659
Query: 679 ---DEAYEEQNGS 688
D A E++ S
Sbjct: 660 VFLDIAEEDKENS 672
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 232/534 (43%), Gaps = 110/534 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L R ++ R++H ++K +F+ L+ +Y CG L AR VF
Sbjct: 138 DRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF 197
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +V TWN II+ K G +++ RLF M ++
Sbjct: 198 DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLP------------------- 238
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + LSAC+ D + G +VH+ + + S++ + +A+IDMY
Sbjct: 239 ------------TTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286
Query: 198 KC-------------------------------GRVSCARRVFDGMRERNIVSWNSLITC 226
C G + AR FD M E++ VSW ++I
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y ++ +ALE+F M A+ ++PDE T+ SV++ACA L A + G I + R K++N
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDR-NKIKN 405
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
DL + NAL+DMY KCG +++A +F M R+ + T+M+ G A
Sbjct: 406 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLA---------------- 449
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG E+AL +F + + S+ P T+ +L+AC + + GR
Sbjct: 450 ---------------VNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGR- 493
Query: 407 AHTHVVKHGLRFLS--GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
K+ LR S G E +I L+D+ + G +++ + E M ++ + + W A+
Sbjct: 494 ------KYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGAL 547
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC----ACSHAGLVEEGRK 513
+ GC A + K++L +PD+ + +LC AC + E R+
Sbjct: 548 LAGCRVYRESDMAEMVVKQILEL--EPDNGAVYVLLCNIYAACKRWNDLRELRQ 599
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/603 (40%), Positives = 353/603 (58%), Gaps = 39/603 (6%)
Query: 73 ARKVFDKM-SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A V KM S ++VF +S++ K G +A ++F +MPER+ SW +M+SG+A
Sbjct: 130 AHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKL 189
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+EALG F M E +E+ F S LSA G Q+H + K+ S V +G+A
Sbjct: 190 AAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNA 249
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+ MY KCG + A + F+ ++N ++W+++IT Y Q+G + AL++F M SGI P
Sbjct: 250 LVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPS 309
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
E T V++AC+ L A EG Q+H L++ + + + ALVDMYAKC
Sbjct: 310 EFTFVGVINACSDLGAAWEGKQVHDYLLKL-GFESQIYVMTALVDMYAKC---------- 358
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
SS+ AR F + E ++V W ++I GY QNGENE+AL
Sbjct: 359 ---------------------SSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALS 397
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
L+ ++ E + P T ++L AC++LA L+ G+Q H VK+G ++ +G++
Sbjct: 398 LYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGL------EVPIGSA 451
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L MY KCG ++DG +F M RD +SWNAMI G +QNG G EAL LF++M L G KPD
Sbjct: 452 LSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPD 511
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+VT + +L ACSH GLVE G YF M E G+ P +HY CMVD+L RAG L EA
Sbjct: 512 YVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFT 571
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
E+ + +W +L AC+ +RN LG Y +KL+E+ S YVLLS++Y+ LGRW
Sbjct: 572 ESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWE 631
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+V RVR++M+ RGV K+PGCSWIE+ V+VF+VKD+ HP +I++ L+ L+++MK G
Sbjct: 632 DVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEG 691
Query: 672 YVP 674
Y P
Sbjct: 692 YEP 694
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/558 (30%), Positives = 279/558 (50%), Gaps = 83/558 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F LL ++S+ + +HA+IIKS +S ++I N L+++YAKC L A+ VF
Sbjct: 6 NRSFFTALLQYT-HNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVF 63
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH--DRFSEA 135
+++ NK+V SWN +++G++QH S
Sbjct: 64 ERIQNKDV-------------------------------VSWNCIINGYSQHGPSGSSHV 92
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F +M +EN A + ++F +A + VD G HA+ K DV++GS+L++M
Sbjct: 93 MELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNM 152
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G AR+VFD M ERN VSW ++I+ Y A++AL +F M +E
Sbjct: 153 YCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV----LGNALVDMYAKCGKLNEARCVF 311
SV+SA G QIH C ++N L+ +GNALV MYAKCG L++A F
Sbjct: 213 TSVLSALTLPELVNNGKQIH-----CIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTF 267
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ +N ++ ++M++GYA Q+G++++AL
Sbjct: 268 ETSSDKNSITWSAMITGYA-------------------------------QSGDSDKALK 296
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF + + P+ +TF ++NAC++L G+Q H +++K G ES I+V +
Sbjct: 297 LFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF------ESQIYVMTA 350
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KC S+ D + F+ + E D V W +MI G QNG +AL L+ +M + G P+
Sbjct: 351 LVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPN 410
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+TM VL ACS +E+G++ + K +G + + + + GCL + +
Sbjct: 411 ELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVF 469
Query: 552 EAMPMQPDAVIWGSLLAA 569
MP + D + W ++++
Sbjct: 470 RRMPAR-DVISWNAMISG 486
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 200/383 (52%), Gaps = 63/383 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L + + V++ +++H +K+ S + + N L+ +YAKCG L A + F+ S
Sbjct: 212 FTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSS 271
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+KN TW+++ITG + G D A +LF+S
Sbjct: 272 DKNSITWSAMITGYAQSGDSDKALKLFSS------------------------------- 300
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH SE++F ++AC+ G QVH L K + S +Y+ +AL+DMY KC
Sbjct: 301 MHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSS 360
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR+ FD ++E +IV W S+I Y QNG DAL ++ RM GI P+E+T+ASV+ A
Sbjct: 361 IVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKA 420
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+SLAA ++G QIHAR ++ ++ +G+AL MYAKCG L + VF RMP R+V+S
Sbjct: 421 CSSLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS 479
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M+S G +QNG +EAL LF ++ E
Sbjct: 480 WNAMIS-------------------------------GLSQNGCGKEALELFEEMQLEGT 508
Query: 382 CPTHYTFGNLLNACANLADLQLG 404
P + TF N+L+AC+++ ++ G
Sbjct: 509 KPDYVTFVNILSACSHMGLVERG 531
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P++ +F L + LQ G+ H ++K S +++ NSL+++Y KC +
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-------SSSSCVYIANSLVNLYAKCQRL 56
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGY--GTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ +FE + +D VSWN +I G +Q+G + + LF++M P+ T GV
Sbjct: 57 REAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFT 116
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
A S GR + K + +D + + ++++ +AG EA+ + + MP +
Sbjct: 117 AASTLVDAAGGRLAHAVAIK---MDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ER 172
Query: 559 DAVIWGSLLAA 569
++V W ++++
Sbjct: 173 NSVSWATMISG 183
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 457 bits (1176), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 385/653 (58%), Gaps = 29/653 (4%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ S +R+ ++ RV R+ + S N +I Y + G ARK+FD+M +++
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVS----YNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+WN +I G ++ + A LF MPERD CSWN+M+SG+AQ+ +A F +M +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N + S+ + LSA + + +L KSR + + + L+ + K ++ A
Sbjct: 187 N----DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+ FD M R++VSWN++IT Y Q+G +A ++F DE + V + A +
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----------DESPVQDVFTWTAMV 288
Query: 266 AAFKEGLQIH-ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ + + + AR + + + V NA++ Y + ++ A+ +FD MP RNV + +
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++GYA+ + A+ +F KM +R+ VSW A+IAGY+Q+G + EAL LF ++RE
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+F + L+ CA++ L+LG+Q H +VK G E+ FVGN+L+ MY KCGS+E+
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEE 462
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M +D VSWN MI G +++G+G AL F+ M G KPD TM+ VL ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV++GR+YF +M++++G+ P HY CMVDLLGRAG L++A L++ MP +PDA IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL A +VH N L E A K+ +EP NSG YVLLSN+YA GRWG+V ++R MR +G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V K PG SWIEI + F V D+ HP EI+ L+ L MK+ GYV S
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 41/355 (11%)
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
L++C +D+ N + Y + G+ NEA VF RMP + VS M+SGY + +
Sbjct: 56 LLKCGD--SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF-GNLLNACA 396
AR +F +M ER++VSWN +I GY +N +A LF ++ VC + G N C
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ A R E++D+ N+L+ Y++ +E+ C +F++
Sbjct: 174 DDARSVFDRMP--------------EKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSWN ++ G + EA F M + D V+ ++ + +G ++E R+ F
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 517 SMSKEHGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
+P++D +T MV + ++EA+ L + MP + + V W ++LA
Sbjct: 275 E-------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG----- 321
Query: 575 NIMLGEY--VAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ GE +AK+L ++ P N + + YA+ G+ E + M KR V
Sbjct: 322 -YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 13/242 (5%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ S F+ L +C ++ +++H R++K + + F+ N L+ +Y KCG + A +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRF 132
F +M+ K++ +WN++I G + GF + A R F SM D + +++S +
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGS 190
+ YF M + + S AC + + G H L+ + D +
Sbjct: 527 DKGRQYFYTMTQDYGVMP----NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 191 ALIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
L+ G A D M N + L Y +G D ++ VRM G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 248 IE 249
++
Sbjct: 643 VK 644
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/659 (37%), Positives = 366/659 (55%), Gaps = 43/659 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + R +H + S +++ + LI +Y+KCG + A ++F K
Sbjct: 182 FLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK-- 239
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M ER+ SW +++ AQH + +EA + K
Sbjct: 240 -----------------------------MKERNVVSWTAIIQANAQHRKLNEAFELYEK 270
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + +F S L++C G ++H+ +S+ +DV + +ALI MY KC
Sbjct: 271 MLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC 330
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG-----PASDALEVFVRMMASGIEPDEVTLA 256
+ AR FD M +R+++SW+++I Y Q+G + ++ RM G+ P++VT
Sbjct: 331 IQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFM 390
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC+ A ++G QIHA + + +D L A+ +MYAKCG + EA VF +M
Sbjct: 391 SILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN 449
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+NVV+ S+++ Y K + SA +F++M RNVVSWN +IAGY Q+G+ + L +
Sbjct: 450 KNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
K E P T ++L AC L+ L+ G+ H VK GL ESD V SLI MY
Sbjct: 510 KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGL------ESDTVVATSLIGMY 563
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V + +F+ + RD V+WNAM+ G Q+G G EA+ LFK+ML P+ +T
Sbjct: 564 SKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFT 623
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
V+ AC AGLV+EGR+ F M ++ + P K HY CMVDLLGRAG L EA+ I+ MP
Sbjct: 624 AVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPC 683
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD +W +LL ACK H N+ L E+ A +L +EPSN+ YV LSN+YA+ GRW + +V
Sbjct: 684 EPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKV 743
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
RK+M +G+ K G S IEI G ++ F+ +D HP I+ L+MLT+EMK GY P+
Sbjct: 744 RKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPD 802
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 248/506 (49%), Gaps = 54/506 (10%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R EA+ + ++ ++G + CA F+ G VH L + + D+Y+G+
Sbjct: 58 RLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGN 117
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+LI+ Y K G V+ +VF M R++V+W+S+I Y N + A + F RM + IEP
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T S++ AC + + ++ +IH +++ + D+ + AL+ MY+KCG+++ A +
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHT-VVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F +M RNVVS T+++ A+ + A ++ KML+ AG
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ----------AG----------- 275
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+ P TF +LLN+C L GR+ H+H+ + GL E+D+ V N
Sbjct: 276 ----------ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGL------ETDVVVAN 319
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG-----TEALGLFKKMLL 485
+LI MY KC ++D F+ M +RD +SW+AMI G AQ+GY E L ++M
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRR 379
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G P+ VT + +L ACS G +E+GR+ + +SK G + T + ++ + G +
Sbjct: 380 EGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIY 438
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA--KKLLEIEPSNSGPYVLLSNM 603
EA+ + M + V W SLL I G+ + K E+ N + L+
Sbjct: 439 EAEQVFSKME-NKNVVAWASLLTM-----YIKCGDLTSAEKVFSEMSTRNVVSWNLMIAG 492
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQP 629
YA+ G +V + M+ G QP
Sbjct: 493 YAQSGDIAKVFELLSSMKVEGF--QP 516
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 160/300 (53%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F + F +L +C ++ R++HA I K F S+ +Q + ++YAKCG +Y A +
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF KM NKNV W S++T +K G + A ++F+ M R+ SWN M++G+AQ ++
Sbjct: 443 VFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
M E F + S L AC + G VHA K SD + ++LI M
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGM 562
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG V+ AR VFD + R+ V+WN+++ Y Q+G +A+++F RM+ + P+E+T
Sbjct: 563 YSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITF 622
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+SAC +EG +I + +++ +VD+ + G+L EA RMP
Sbjct: 623 TAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMP 682
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 11/241 (4%)
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G +EA+ L ++K+ + T+G ++ CA L + G+ H + + GL
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAI----- 111
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
DI++GNSLI+ Y K G V ++F M RD V+W++MI A N + +A F++M
Sbjct: 112 -DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 170
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
+P+ +T + +L AC++ ++E+ R+ ++ K G+ T ++ + + G
Sbjct: 171 KDANIEPNRITFLSILKACNNYSMLEKARE-IHTVVKASGMETDVAVATALITMYSKCGE 229
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLLS 601
+ A + + M + + V W +++ A HR + + +K+L+ I P N+ +V L
Sbjct: 230 ISLACEIFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP-NAVTFVSLL 287
Query: 602 N 602
N
Sbjct: 288 N 288
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/668 (35%), Positives = 384/668 (57%), Gaps = 49/668 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A +L C + ++ +VHA+++ + F+ +RL++VY + GC+ AR++FDKMS
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NVF+W +I+ M G ++ E + F
Sbjct: 73 ERNVFSWTAIM----------------------------EMYCGLGDYE---ETIKLFYL 101
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E + F AC+ ++++G V+ + + + + +++DM+ KCGR
Sbjct: 102 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 161
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR F+ + +++ WN +++ Y G AL VF +M+ G++P+ +T+AS VSA
Sbjct: 162 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSA 221
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C +L+ + G +IH ++ E+L +DL++GN+LVD YAKC + AR F + ++VS
Sbjct: 222 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 281
Query: 322 ETSM--VSGYAKASSVKSARLMFTKML----------ERNVVSWNALIAGYTQNGENEEA 369
+M V+G+ + K+A F +M R+VV WN++I+ Q+G + A
Sbjct: 282 WNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNA 341
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L L R + +V T + L AC+ LA L+ G++ H +++ GL ++ F+
Sbjct: 342 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL------DTCNFIL 395
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NSLIDMY +CGS++ RIF+ M +RD VSWN MI +G+G +A+ LF++ G K
Sbjct: 396 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 455
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+H+T +L ACSH+GL+EEG KYF M E+ + P + Y CMVDLL RAG +E
Sbjct: 456 PNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 515
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
IE MP +P+A +WGSLL AC++H N L EY A+ L E+EP +SG YVL++N+Y+ GR
Sbjct: 516 FIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGR 575
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W + ++R LM++RGV K PGCSWIE+ ++ F+V D HPL ++I ++ L ++K
Sbjct: 576 WEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKE 635
Query: 670 VGYVPNAS 677
+GYVP+ +
Sbjct: 636 IGYVPDTN 643
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 213/501 (42%), Gaps = 125/501 (24%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F K+ +C K+ + V+ ++ F ++ ++D++ KCG + AR+ F
Sbjct: 110 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 169
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ K+VF WN MVSG+ F +AL
Sbjct: 170 EEIEFKDVFMWN-------------------------------IMVSGYTSKGEFKKALN 198
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMY 196
F KM E + + SA+SAC + G ++H K SD+ +G++L+D Y
Sbjct: 199 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 258
Query: 197 GKCGRVSCARR-------------------------------------------VFDGMR 213
KC V ARR VF +
Sbjct: 259 AKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELS 318
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++V WNS+I+ Q+G + +AL++ M S +E + VT+ S + AC+ LAA ++G +
Sbjct: 319 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 378
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH ++RC + +L N+L+DMY +CG + ++R +FD MP R
Sbjct: 379 IHQFIIRCGLDTCNFIL-NSLIDMYGRCGSIQKSRRIFDLMPQR---------------- 421
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
++VSWN +I+ Y +G +A+ LF+ + + P H TF NLL+
Sbjct: 422 ---------------DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLS 466
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCR 447
AC +H+ +++ G ++ +++ + + ++D+ + G +
Sbjct: 467 AC-----------SHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 515
Query: 448 IFETM-VERDWVSWNAMIVGC 467
E M E + W +++ C
Sbjct: 516 FIEKMPFEPNAAVWGSLLGAC 536
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/672 (35%), Positives = 374/672 (55%), Gaps = 71/672 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S +A + SC + ++H +KS FA + I +D+YAKC
Sbjct: 237 VSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKC--------- 287
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D+MS DA ++F ++P + S+N+++ G+A+ D+ +AL
Sbjct: 288 -DRMS---------------------DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKAL 325
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + + E S AL+AC+ G Q+H L K ++ + + ++DMY
Sbjct: 326 EIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A +FD M R+ VSWN++I +EQN L +FV M+ S +EPD+ T
Sbjct: 386 GKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYG 445
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SVV ACA A G++IH R+++ + D +G+ALVDMY KCG L EA + DR+
Sbjct: 446 SVVKACAGQQALNYGMEIHGRIVK-SGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE- 503
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
E+ VSWN++I+G++ ++E A F +
Sbjct: 504 ------------------------------EKTTVSWNSIISGFSSQKQSENAQRYFSQM 533
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
V P ++T+ +L+ CAN+A ++LG+Q H ++K L SD+++ ++L+DMY
Sbjct: 534 LEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLH------SDVYIASTLVDMY 587
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D +FE +RD+V+W+AMI A +G+G +A+ LF++M L KP+H I
Sbjct: 588 SKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFI 647
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+H G V++G YF M +GL P +HY+CMVDLLGR+ ++EA LIE+M
Sbjct: 648 SVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHF 707
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D VIW +LL+ CK+ N+ + E LL+++P +S YVLL+N+YA +G WGEV ++
Sbjct: 708 EADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKI 767
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R +M+ + K+PGCSWIE+ V+ F+V DK HP ++EIY +L EMK GYVP+
Sbjct: 768 RSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDI 827
Query: 677 SD--DEAYEEQN 686
DE EEQ+
Sbjct: 828 DSMLDEEVEEQD 839
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 289/553 (52%), Gaps = 50/553 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L C K+++ ++ HA++I + F I++ N L+ Y K + A KVFD+M
Sbjct: 9 FSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMP 68
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V +WN++I G + G + A LF +MPERD SWNS++S + + +++ FV+
Sbjct: 69 HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S +F L AC+G D+ +G QVH L + + +DV GSAL+DMY KC +
Sbjct: 129 MRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A R+F M ERN+V W+++I Y QN + L++F M+ G+ + T ASV +
Sbjct: 189 LDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L+AFK G Q+H ++ + D ++G A +DMYAKC ++++A VF+ +P N
Sbjct: 249 CAGLSAFKLGTQLHGHALKSD-FAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP--NPPR 305
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ S+NA+I GY + + +AL +F+ L+R +
Sbjct: 306 Q-----------------------------SYNAIIVGYARQDQGLKALEIFQSLQRTYL 336
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ L AC+ + G Q H VK GL F +I V N+++DMY KCG+
Sbjct: 337 SFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGF------NICVANTILDMYGKCGA 390
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ + C IF+ M RD VSWNA+I QN + L LF ML +PD T V+ A
Sbjct: 391 LVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 502 CS-----HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
C+ + G+ GR S M + + + +VD+ G+ G L EA+ + + +
Sbjct: 451 CAGQQALNYGMEIHGRIVKSGMGLDWFVG------SALVDMYGKCGMLMEAEKIHDRLE- 503
Query: 557 QPDAVIWGSLLAA 569
+ V W S+++
Sbjct: 504 EKTTVSWNSIISG 516
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 285/581 (49%), Gaps = 78/581 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F+ +L +C + +VH I+ F +++ + L+D+Y+KC L GA ++F
Sbjct: 137 DYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF 196
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +N+ W+++I +G+ Q+DRF E L
Sbjct: 197 REMPERNLVCWSAVI-------------------------------AGYVQNDRFIEGLK 225
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M +S+ ++ S +CAG FK+GTQ+H KS ++ D +G+A +DMY
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC R+S A +VF+ + S+N++I Y + ALE+F + + + DE++L+
Sbjct: 286 KCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSG 345
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++AC+ + EG+Q+H ++C L ++ + N ++DMY KCG L EA +FD M R
Sbjct: 346 ALTACSVIKGHLEGIQLHGLAVKC-GLGFNICVANTILDMYGKCGALVEACTIFDDMERR 404
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V SWNA+IA + QN E + L LF +
Sbjct: 405 DAV-------------------------------SWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R ++ P +T+G+++ ACA L G + H +VK G+ D FVG++L+DMY
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGL------DWFVGSALVDMYG 487
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + + +I + + E+ VSWN++I G + A F +ML G PD+ T
Sbjct: 488 KCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYAT 547
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + + K L D Y + +VD+ + G + +++ + E P
Sbjct: 548 VLDVCANMATIELGKQIHAQILK---LNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
+ D V W +++ A H + GE K E++ N P
Sbjct: 605 -KRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQLLNVKP 641
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 223/476 (46%), Gaps = 73/476 (15%)
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
+++F L C+ G Q HA + + + +Y+ + L+ Y K ++ A +VFD
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 211 GMRERNIVS-------------------------------WNSLITCYEQNGPASDALEV 239
M R+++S WNSL++CY NG ++E+
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
FVRM + I D T + V+ AC+ + + GLQ+H ++ ND+V G+ALVDMY+
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQM-GFENDVVTGSALVDMYS 184
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KC KL+ A +F MP RN+V ++++ AG
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVI-------------------------------AG 213
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Y QN E L LF+ + + + + T+ ++ +CA L+ +LG Q H H +K +
Sbjct: 214 YVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAY- 272
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
D +G + +DMY KC + D ++F T+ S+NA+IVG A+ G +AL +
Sbjct: 273 -----DSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEI 327
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F+ + D +++ G L ACS EG + ++ + GL ++D+ G
Sbjct: 328 FQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ-LHGLAVKCGLGFNICVANTILDMYG 386
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM--LGEYVAKKLLEIEPSN 593
+ G L EA T+ + M + DAV W +++AA + + I+ L +V+ +EP +
Sbjct: 387 KCGALVEACTIFDDMERR-DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 48/288 (16%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
QR Q++ D+ +A +LD C ++ +++HA+I+K S+++I + L+D+
Sbjct: 527 QRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDM 586
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+KCG + +R +F+K ++ TW ++M+
Sbjct: 587 YSKCGNMQDSRLMFEKTPKRDYVTW-------------------------------SAMI 615
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSR 181
+A H +A+ F +M N + F S L ACA G VD G ++ +S
Sbjct: 616 CAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD--KGLHYFQIM-QSH 672
Query: 182 YSSDVYMG--SALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALE 238
Y D +M S ++D+ G+ +V+ A ++ + M E + V W +L++ + G A +
Sbjct: 673 YGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEK 732
Query: 239 VFVRMMASGIEPDE----VTLASVVSACASLAAFKEGLQIHARLMRCE 282
F ++ ++P + V LA+V A++ + E +I + + C+
Sbjct: 733 AFNSLLQ--LDPQDSSAYVLLANVY---ANVGMWGEVAKIRSIMKNCK 775
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/656 (37%), Positives = 367/656 (55%), Gaps = 69/656 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C ++ +++H+ ++K+ + + I+ L+D+Y KCG + A ++F
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
NV WN M+ + Q +++
Sbjct: 303 KSGDRTNVVL-------------------------------WNLMLVAYGQISDLAKSFD 331
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +E+++ L C + + +G Q+H L K+ + SD+Y+ LIDMY
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + ARR+ + + +++VSW S+I Y Q+ +ALE F M GI PD + LAS
Sbjct: 392 KYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLAS 451
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A ++G QIH+R+ D+ + NALV++YA+CG+ EA +F+ +
Sbjct: 452 AISACAGIKAMRQGQQIHSRVY-VSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-- 508
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ ++WN +++G+ Q+G EEAL +F +
Sbjct: 509 -----------------------------HKDKITWNGMVSGFAQSGLYEEALEVFIKMY 539
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V +TF + ++A ANLAD++ G+Q H V+K +G S+ V N+LI +Y
Sbjct: 540 QAGVKYNVFTFVSSISASANLADIKQGKQIHATVIK------TGCTSETEVANALISLYG 593
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED F M ER+ VSWN +I C+Q+G+G EAL LF +M G KP+ VT IG
Sbjct: 594 KCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIG 653
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLVEEG YF SMS EHG+ P DHY C+VD+LGRAG LD A+ +E MP+
Sbjct: 654 VLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVS 713
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A++W +LL+AC+VH+NI +GE AK LLE+EP +S YVLLSN YA G+W VR
Sbjct: 714 ANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVR 773
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
K+M+ RGV K+PG SWIE+ V+ F V D+ HPL +IY L L + ++GY+
Sbjct: 774 KMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYI 829
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 238/481 (49%), Gaps = 40/481 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N +I K G + A R+F + RD SW +M+SG+A++ EA+G + +MH
Sbjct: 81 NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVV 140
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ Y S LSAC + F+ G VHA + K S+ +G+ALI +Y + G +S A RV
Sbjct: 141 PTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERV 200
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M + V++N+LI+ + Q G ALE+F M SG PD VT+AS+++ACAS+
Sbjct: 201 FSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDL 260
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+G Q+H+ L++ + D ++ +L+D+Y KCG + EA +F NV
Sbjct: 261 NKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNV--------- 310
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
V WN ++ Y Q + ++ LF + V P +T+
Sbjct: 311 ----------------------VLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTY 348
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
LL C ++ LG Q H +K G ESD++V LIDMY K G ++ RI
Sbjct: 349 PCLLRTCTYAGEINLGEQIHLLSIKTGF------ESDMYVSGVLIDMYSKYGWLDKARRI 402
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
E + +D VSW +MI G Q+ + EAL FK M L G PD++ + + AC+ +
Sbjct: 403 LEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM 462
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+G++ S + G + + +V+L R G EA +L EA+ D + W +++
Sbjct: 463 RQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HKDKITWNGMVS 520
Query: 569 A 569
Sbjct: 521 G 521
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 236/490 (48%), Gaps = 47/490 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD-FKM 169
M R S N ++GF H+ + L F + L F AL C GSV + +
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
+HA D G+ LID+Y K G V ARRVF+ + R+ VSW ++++ Y +
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG +A+ ++ +M SG+ P L+SV+SAC A F++G +HA++ + + ++ V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYK-QGSCSETV 179
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNAL+ +Y + G L+ A VF MP + V+ +++S +A
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHA------------------- 220
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
Q G E AL +F ++ P T +LL ACA++ DL G+Q H+
Sbjct: 221 ------------QCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHS 268
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+++K G+ D + SL+D+Y+KCG + + IF++ + V WN M+V Q
Sbjct: 269 YLLKAGM------SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ LF +M+ G +P+ T +L C++AG + G + +S + G D
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQ-IHLLSIKTGFE--SD 379
Query: 530 HYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR--NIMLGEYVAKK 585
Y ++D+ + G LD+A+ ++E + + D V W S++A H L + +
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGYVQHEFCKEALETFKDMQ 438
Query: 586 LLEIEPSNSG 595
L I P N G
Sbjct: 439 LFGIWPDNIG 448
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 131/320 (40%), Gaps = 47/320 (14%)
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC-ANLADLQL 403
M R S N + G+ + + E+ L LF R+ F L C ++ L
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
H + GL GE D GN LID+Y K G V+ R+FE + RD VSW AM
Sbjct: 61 VPVIHAKAITCGL----GE--DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAM 114
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
+ G A+NG G EA+GL+ +M G P + VL AC+ A L E+GR + + K+ G
Sbjct: 115 LSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQ-G 173
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM--------------------------- 556
++ L R G L A+ + MP
Sbjct: 174 SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFE 233
Query: 557 -------QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL---LSNMYAE 606
PD V SLLAAC ++ G+ + LL + S Y++ L ++Y +
Sbjct: 234 EMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL--KAGMSPDYIIEGSLLDLYVK 291
Query: 607 LGRWGEVVRVRKLMRKRGVV 626
G E + + K + VV
Sbjct: 292 CGVIVEALEIFKSGDRTNVV 311
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/617 (40%), Positives = 372/617 (60%), Gaps = 26/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y ARKVF+KM ++++ +WN +++G +K G + A LF MPE+D
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+M+SGFAQ+ EA F +M +N E S+ LSA + + + L
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARR----L 206
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
S+ ++ + L+ Y + R+ AR +FD M R+ +SWN +IT Y QNG S+A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F +E+ + V + A ++ F + G+ A + E + V NA++
Sbjct: 267 RLF----------EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIA 316
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + ++ +AR +FD+MP RN S +MV+GYA+ ++ A+++F +M +R+ +SW A+
Sbjct: 317 GYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+GY Q+G++EEAL LF +KR+ L++CA +A L+LG+Q H +VK G
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
++ GN+L+ MY KCGS+E+ +FE + E+D VSWN MI G A++G+G EA
Sbjct: 437 ------QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L LF+ M + KPD VT++GVL ACSH GLV++G +YF+SM + +G+ HYTCM+D
Sbjct: 491 LALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAG LDEA L+++MP PDA WG+LL A ++H + LGE A+K+ E+EP NSG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW EV +R MR +GV K PG SW+EI ++F V D HP + I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L E+K+ G+V
Sbjct: 670 YAYLEELDLELKKDGFV 686
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D L+ S A L SC ++ +++H R++K+ F + N L+ +Y KCG +
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP---ERDQCSWNSMVSGFAQH 129
A VF+ ++ K++ +WN++I G + GF +A LF SM + D + ++S +
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHT 518
Query: 130 DRFSEALGYFVKMHSENFALS----EYSFGSALSACAGSVD-----------FKMGTQVH 174
+ + YF M+ +N+ ++ Y+ L AG +D +
Sbjct: 519 GLVDKGMEYFNSMY-QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 577
Query: 175 ALLSKSRYSSDVYMGSA------------------LIDMYGKCGRVSCARRVFDGMRERN 216
ALL SR D +G L ++Y GR R + MR++
Sbjct: 578 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 217 I 217
+
Sbjct: 638 V 638
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/617 (40%), Positives = 371/617 (60%), Gaps = 26/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y ARKVF+KM ++++ +WN +++G +K G + A LF MPE+D
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+M+SGFAQ+ EA F +M +N E S+ LSA + + + L
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVKN----EISWNGLLSAYVQNGRIEDARR----L 206
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
S+ ++ + L+ Y + R+ AR +FD M R+ +SWN +IT Y QNG S+A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEAR 266
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F +E+ + V + A ++ F + G+ A + E + V NA++
Sbjct: 267 RLF----------EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIA 316
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + ++ +AR +FD+MP RN S +MV+GYA+ ++ A+++F +M +R+ +SW A+
Sbjct: 317 GYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAM 376
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+GY Q+G++EEAL LF +KR+ L++CA +A L+LG+Q H +VK G
Sbjct: 377 ISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGF 436
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
++ GN+L+ MY KCGS+E+ +FE + E+D VSWN MI G A++G+G EA
Sbjct: 437 ------QTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L LF+ M + KPD VT++GVL ACSH G V++G +YF+SM + +G+ HYTCM+D
Sbjct: 491 LALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAG LDEA L+++MP PDA WG+LL A ++H + LGE A+K+ E+EP NSG
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW EV +R MR +GV K PG SW+EI ++F V D HP + I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L E+K+ G+V
Sbjct: 670 YAYLEELDLELKKDGFV 686
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 37/241 (15%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D L+ S A L SC ++ +++H R++K+ F + N L+ +Y KCG +
Sbjct: 399 DGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEE 458
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP---ERDQCSWNSMVSGFAQH 129
A VF+ ++ K++ +WN++I G + GF +A LF SM + D + ++S +
Sbjct: 459 AFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHT 518
Query: 130 DRFSEALGYFVKMHSENFALS----EYSFGSALSACAGSVD-----------FKMGTQVH 174
+ + YF M+ +N+ ++ Y+ L AG +D +
Sbjct: 519 GFVDKGMEYFNSMY-QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWG 577
Query: 175 ALLSKSRYSSDVYMGSA------------------LIDMYGKCGRVSCARRVFDGMRERN 216
ALL SR D +G L ++Y GR R + MR++
Sbjct: 578 ALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637
Query: 217 I 217
+
Sbjct: 638 V 638
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 247/675 (36%), Positives = 370/675 (54%), Gaps = 69/675 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A LL +C + +++H+ ++K+ + + ++ L+D+Y K G + A ++F
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D NV WN M+ + Q D +++
Sbjct: 303 DSGDRTNVVL-------------------------------WNLMLVAYGQIDDLAKSFD 331
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++++ L C + + +G Q+H+L K+ + SD+Y+ LIDMY
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A+R+ D + E+++VSW S+I Y Q+ +ALE F M A GI PD + LAS
Sbjct: 392 KYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLAS 451
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A +G QIHAR+ D+ + N LV +YA+CG EA F+ +
Sbjct: 452 AISACAGIKAVHQGSQIHARVY-VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIE-- 508
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ ++WN LI+G+ Q+G EEAL +F +
Sbjct: 509 -----------------------------HKEGITWNGLISGFAQSGLYEEALKVFMKMD 539
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ +TF + ++A ANLAD++ G+Q H V+K +G S+ + N+LI +Y
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIK------TGYTSETEISNALISLYG 593
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED F M +R+ VSWN +I C+Q+G G EAL LF +M G KP VT +G
Sbjct: 594 KCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVG 653
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLVEEG YF SMS EHG+ P DHY C+VD+LGRAG LD AK +E MP+
Sbjct: 654 VLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIP 713
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
D+++W +LL+ACKVH+N+ +GE+ AK LLE+EP +S YVLLSN YA G+W ++R
Sbjct: 714 ADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIR 773
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K+M+ RGV K+PG SWIE+ V+ F V D+ HPL +IY L L + ++GY
Sbjct: 774 KIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENY 833
Query: 678 DDEAYEEQNGSNSTS 692
+E+ G + T+
Sbjct: 834 HLFHEKEKEGKDPTA 848
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 242/486 (49%), Gaps = 50/486 (10%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N +I K GF+ A R+F + RD SW +++SG+AQ+ EA+ + +MH
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ Y S LSAC + F++G +H + K + S+ ++G+ALI +Y +C A RV
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M + V++N+LI+ + Q G AL +F M SG+ PD VT+AS+++AC+++
Sbjct: 201 FCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDL 260
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
++G Q+H+ L++ + D ++ +L+D+Y K G + EA +FD NV
Sbjct: 261 RKGKQLHSYLLKA-GMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV--------- 310
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
V WN ++ Y Q + ++ +F + V P +T+
Sbjct: 311 ----------------------VLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTY 348
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L C + ++ LG Q H+ +K+G +SD++V LIDMY K G ++ RI
Sbjct: 349 PCMLRTCTHTGEIGLGEQIHSLTIKNGF------QSDMYVSGVLIDMYSKYGWLDKAQRI 402
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
+ + E+D VSW +MI G Q+ + EAL FK+M CG PD++ + + AC+ V
Sbjct: 403 LDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAV 462
Query: 509 EEG-----RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
+G R Y S S + + + +V L R G EA + EA+ + + W
Sbjct: 463 HQGSQIHARVYVSGYSADVSI------WNGLVYLYARCGISKEAFSSFEAIE-HKEGITW 515
Query: 564 GSLLAA 569
L++
Sbjct: 516 NGLISG 521
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 230/466 (49%), Gaps = 45/466 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS-VDFKM 169
M R S+N ++GF D + L F + L F AL AC GS + +
Sbjct: 1 MTPRGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPL 60
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
++HA S +G+ LID+Y K G V ARRVF+ + R+ VSW ++++ Y Q
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG +A+ ++ M SG+ P L+S++SAC F+ G IH ++ + + ++
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYK-QGFFSETF 179
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNAL+ +Y +C A DR +F ML +
Sbjct: 180 VGNALISLYLRCRSFRLA----DR---------------------------VFCDMLYCD 208
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V++N LI+G+ Q G + ALG+F ++ + P T +LL AC+ + DL+ G+Q H+
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+++K G+ D + SL+D+Y+K G +E+ +IF++ + V WN M+V Q
Sbjct: 269 YLLKAGMSL------DYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ +F +ML G +P+ T +L C+H G + G + S++ ++G D
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQ--SD 379
Query: 530 HYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y ++D+ + G LD+A+ +++ M + D V W S++A H
Sbjct: 380 MYVSGVLIDMYSKYGWLDKAQRILD-MIEEKDVVSWTSMIAGYVQH 424
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 376/659 (57%), Gaps = 70/659 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F LL C R +S+ R VHA I+KS +++N L+ +YAKCG L
Sbjct: 47 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSL-------- 98
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
DA R+F S+ +R+ SW +M+ F ++ EA
Sbjct: 99 -----------------------TDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKC 135
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ M + +F S L+A ++G +VH + ++ + +G++L+ MY K
Sbjct: 136 YETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAK 195
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG +S AR +FD + E+N+V+W LI Y Q G ALE+ M + + P+++T AS+
Sbjct: 196 CGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASI 255
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ C + AA + G ++H +++ R +L + N+L+ MY KCG L EA
Sbjct: 256 LQGCTTPAALEHGKKVHRYIIQSGYGR-ELWVVNSLITMYCKCGGLEEA----------- 303
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
R +F+ + R+VV+W A++ GY Q G ++EA+ LFR +++
Sbjct: 304 --------------------RKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ + P TF ++L +C++ A LQ G++ H +V G D+++ ++L+ MY K
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL------DVYLQSALVSMYAK 397
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGC-AQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
CGS++D +F M ER+ V+W A+I GC AQ+G EAL F +M G KPD VT
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+H GLVEEGRK+F SM ++G+ P+ +HY+C VDLLGRAG L+EA+ +I +MP
Sbjct: 458 VLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFI 517
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P +WG+LL+AC+VH ++ GE A+ +L+++P + G YV LS++YA GR+ + +VR
Sbjct: 518 PGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVR 577
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
++M KR VVK+PG SWIE+ G V+VF V+DK HP +++IY+ L LT ++K +GYVP+
Sbjct: 578 QVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDT 636
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 236/479 (49%), Gaps = 77/479 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL++ + + ++VH I+++ E + L+ +YAKCG + AR +F
Sbjct: 147 DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIF 206
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ KNV TW +I G + G +D A L +M + +
Sbjct: 207 DRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE---------------------- 244
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
A ++ +F S L C + G +VH + +S Y ++++ ++LI MY
Sbjct: 245 ---------VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYC 295
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR++F + R++V+W +++T Y Q G +A+ +F RM GI+PD++T S
Sbjct: 296 KCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTS 355
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+++C+S A +EG +IH +L+ D+ L +ALV MYAKCG +++A VF++M R
Sbjct: 356 VLTSCSSPAFLQEGKRIHQQLVHA-GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER 414
Query: 318 NVVSETSMVSG-YAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGL 372
NVV+ T++++G A+ + A F +M ++ + V++ ++++ T G EE
Sbjct: 415 NVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKH 474
Query: 373 FR--------------------LLKR-------ESV------CPTHYTFGNLLNACANLA 399
FR LL R E+V P +G LL+AC +
Sbjct: 475 FRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHS 534
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
D++ G +A +V+K L ++ +V +L +Y G ED ++ + M +RD V
Sbjct: 535 DVERGERAAENVLK-----LDPDDDGAYV--ALSSIYAAAGRYEDAEKVRQVMEKRDVV 586
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/672 (36%), Positives = 371/672 (55%), Gaps = 71/672 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S +A + SC + ++H +KS FA + I +D+YAKC ++ A KV
Sbjct: 237 VSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKV 296
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + N P R S+N+++ G+A+ D+ +AL
Sbjct: 297 FNTLPN-----------------------------PPRQ--SYNAIIVGYARQDQGLKAL 325
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + N E S AL+AC+ G Q+H L K ++ + + ++DMY
Sbjct: 326 DIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMY 385
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A +F+ M R+ VSWN++I +EQN L +FV M+ S +EPD+ T
Sbjct: 386 GKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYG 445
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SVV ACA A G +IH R+++ + D +G+ALVDMY KCG L EA + R+
Sbjct: 446 SVVKACAGQQALNYGTEIHGRIIK-SGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLE- 503
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
E+ VSWN++I+G++ ++E A F +
Sbjct: 504 ------------------------------EKTTVSWNSIISGFSSQKQSENAQRYFSQM 533
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P +YT+ +L+ CAN+A ++LG+Q H ++K L SD+++ ++L+DMY
Sbjct: 534 LEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLH------SDVYIASTLVDMY 587
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D +FE +RD+V+W+AMI A +G G +A+ LF++M L KP+H I
Sbjct: 588 SKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFI 647
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+H G V++G YF M +GL P +HY+CMVDLLGR+G ++EA LIE+MP
Sbjct: 648 SVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPF 707
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D VIW +LL+ CK+ N+ + E LL+++P +S YVLL+N+YA +G WGEV ++
Sbjct: 708 EADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKM 767
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R +M+ + K+PGCSWIE+ V+ F+V DK HP ++EIY +L EMK GYVP+
Sbjct: 768 RSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDI 827
Query: 677 SD--DEAYEEQN 686
DE EEQ+
Sbjct: 828 DFMLDEEMEEQD 839
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 290/574 (50%), Gaps = 42/574 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L C K+++ ++VH ++I + F I++ N L+ Y K + A KVFD+M
Sbjct: 9 FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +WN++I G G + A LF SMPERD SWNS++S + + +++ FV+
Sbjct: 69 QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVR 128
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S +F L AC+G D+ +G QVH L + + +DV GSAL+DMY KC +
Sbjct: 129 MRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A RVF M ERN+V W+++I Y QN + L++F M+ G+ + T ASV +
Sbjct: 189 LDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRS 248
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L+AFK G Q+H ++ + D ++G A +DMYAKC ++ +A VF+ +P S
Sbjct: 249 CAGLSAFKLGTQLHGHALKSD-FAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++ GYA+ + +AL +F+ L+R ++
Sbjct: 308 YNAIIVGYARQD-------------------------------QGLKALDIFQSLQRNNL 336
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ L AC+ + G Q H VK GL F +I V N+++DMY KCG+
Sbjct: 337 GFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGF------NICVANTILDMYGKCGA 390
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ + C IFE M RD VSWNA+I QN + L LF ML +PD T V+ A
Sbjct: 391 LMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ + G + + K G+ + +VD+ G+ G L EA+ I A + V
Sbjct: 451 CAGQQALNYGTEIHGRIIKS-GMGLDWFVGSALVDMYGKCGMLMEAEK-IHARLEEKTTV 508
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSN 593
W S+++ + + ++LE I P N
Sbjct: 509 SWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDN 542
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 286/584 (48%), Gaps = 83/584 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA +L +C + +VH I+ F +++ + L+D+Y+KC L A +VF
Sbjct: 137 DYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF 196
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +N+ W+++I +G+ Q+DRF E L
Sbjct: 197 REMPERNLVCWSAVI-------------------------------AGYVQNDRFIEGLK 225
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M +S+ ++ S +CAG FK+GTQ+H KS ++ D +G+A +DMY
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC R+ A +VF+ + S+N++I Y + AL++F + + + DE++L+
Sbjct: 286 KCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSG 345
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++AC+ + EG+Q+H ++C L ++ + N ++DMY KCG L EA +F+ M R
Sbjct: 346 ALTACSVIKRHLEGIQLHGLAVKC-GLGFNICVANTILDMYGKCGALMEACLIFEEMERR 404
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V SWNA+IA + QN E + L LF +
Sbjct: 405 DAV-------------------------------SWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R ++ P +T+G+++ ACA L G + H ++K G+ D FVG++L+DMY
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGL------DWFVGSALVDMYG 487
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + + +I + E+ VSWN++I G + A F +ML G PD+ T
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + + K L D Y + +VD+ + G + +++ + E P
Sbjct: 548 VLDVCANMATIELGKQIHAQILK---LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGE-----YVAKKLLEIEPSNS 594
+ D V W +++ A H LGE + +LL ++P+++
Sbjct: 605 -KRDYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNVKPNHT 644
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 223/474 (47%), Gaps = 73/474 (15%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F L C+ G QVH + + + +Y+ + L+ Y K +++ A +VFD M
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 213 RERNIVSWNSLI-------------------------------TCYEQNGPASDALEVFV 241
+R+++SWN+LI +CY NG ++E+FV
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
RM + I D T A ++ AC+ + + GLQ+H ++ ND+V G+ALVDMY+KC
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQM-GFENDVVTGSALVDMYSKC 186
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
KL++A VF MP RN+V ++++ AGY
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVI-------------------------------AGYV 215
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QN E L LF+ + + + + T+ ++ +CA L+ +LG Q H H +K +
Sbjct: 216 QNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAY--- 272
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
D +G + +DMY KC + D ++F T+ S+NA+IVG A+ G +AL +F+
Sbjct: 273 ---DSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQ 329
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+ D +++ G L ACS EG + ++ + GL ++D+ G+
Sbjct: 330 SLQRNNLGFDEISLSGALTACSVIKRHLEGIQ-LHGLAVKCGLGFNICVANTILDMYGKC 388
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM--LGEYVAKKLLEIEPSN 593
G L EA + E M + DAV W +++AA + + I+ L +V+ +EP +
Sbjct: 389 GALMEACLIFEEMERR-DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 167/324 (51%), Gaps = 26/324 (8%)
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
++T + ++ C++L A G Q+H +++ + + N L+ Y K K+N A VF
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMI-VTGFVPTIYVANCLLQFYCKSSKMNYAFKVF 64
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
DRMP R+V+S +++ GYA ++ A+ +F M ER+VVSWN+L++ Y NG N +++
Sbjct: 65 DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+F ++ + + TF +L AC+ + D LG Q H ++ G E+D+ G++
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGF------ENDVVTGSA 178
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KC ++D R+F M ER+ V W+A+I G QN E L LFK ML G
Sbjct: 179 LVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCL 544
T V +C+ G F ++ HG A LK + T +D+ + +
Sbjct: 239 QSTYASVFRSCA-------GLSAFKLGTQLHGHA-LKSDFAYDSIIGTATLDMYAKCERM 290
Query: 545 DEAKTLIEAMPMQP----DAVIWG 564
+A + +P P +A+I G
Sbjct: 291 FDAWKVFNTLPNPPRQSYNAIIVG 314
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 41/262 (15%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
QR Q++ D+ +A +LD C ++ +++HA+I+K Q S+++I + L+D+
Sbjct: 527 QRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDM 586
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+KCG + +R +F+K ++ TW ++M+
Sbjct: 587 YSKCGNMQDSRLMFEKAPKRDYVTW-------------------------------SAMI 615
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSR 181
+A H +A+ F +M N + F S L ACA G VD K +LS
Sbjct: 616 CAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD-KGLHYFQKMLSHYG 674
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVF 240
+ S ++D+ G+ G+V+ A ++ + M E + V W +L++ + G A + F
Sbjct: 675 LDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAF 734
Query: 241 VRMMASGIEPDE----VTLASV 258
++ ++P + V LA+V
Sbjct: 735 NSLLQ--LDPQDSSAYVLLANV 754
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/654 (37%), Positives = 374/654 (57%), Gaps = 41/654 (6%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+D C SK + + VHAR++++ FD S +
Sbjct: 32 IDKCSSSKQL---KEVHARMLRTGL-------------------------FFDPFSASKL 63
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
FT + L + +D A LF +P+ + +WN+++ +A ++ F+ + +
Sbjct: 64 FT----ASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDK 119
Query: 146 NFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
L ++++F + A + ++GT VH + K + D+Y+ ++L+ YG CG +S
Sbjct: 120 CEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSM 179
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A R+F G+ +++VSWNS+I+ + Q DALE+F++M + P+ VT+ V+SACA
Sbjct: 180 AERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAK 239
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ G + + + R + ++ DL L NA++DMY KCG +++A+ +FD MP R+V S T
Sbjct: 240 KLDLEFGRWVCSYIER-KGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTI 298
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC-P 383
M+ GYAK +ARL+F M + + +WN LI+ Y QNG+ +EAL +F L+ + P
Sbjct: 299 MLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKP 358
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T + L+ACA L + LG H ++ + G+ + + +SL+DMY KCGS+E
Sbjct: 359 DEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVL------NCHLISSLVDMYAKCGSLE 412
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+F ++ ERD W+AMI G +G G A+ LF +M KP+ VT VLCACS
Sbjct: 413 KALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACS 472
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV+EGR +F M +G+ P HY CMVD+LGRAG L+EA LI M P A +W
Sbjct: 473 HAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVW 532
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL AC +H N+ LGE + +LL++EP N G VLLSN+YA+ GRW +V +RKLMR
Sbjct: 533 GALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDT 592
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ K+PGCS IE G+V+ F+V D HPL+ IY L+ + ++K VGY PN S
Sbjct: 593 ELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKS 646
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 209/481 (43%), Gaps = 103/481 (21%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF S L++ V VH IK F +++I N L+ Y CG L A ++F +
Sbjct: 130 PFVIKAASELKASRVGTA--VHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGI 187
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S K+V +WNS+I S FAQ + +AL F+
Sbjct: 188 SCKDVVSWNSMI-------------------------------SAFAQGNCPEDALELFL 216
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM EN + + LSACA +D + G V + + + D+ + +A++DMY KCG
Sbjct: 217 KMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG 276
Query: 201 RVSCARRVFDGMRERNIVS-------------------------------WNSLITCYEQ 229
V A+++FD M ER++ S WN LI+ YEQ
Sbjct: 277 SVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQ 336
Query: 230 NGPASDALEVFVRMMASGI-EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
NG +AL +F + S I +PDEVTL S +SACA L A G IH + R E + +
Sbjct: 337 NGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR-EGIVLNC 395
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
L ++LVDMYAKCG L +A VF + R+V ++M
Sbjct: 396 HLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAM----------------------- 432
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
IAG +G + A+ LF ++ V P TF N+L AC++ + GR
Sbjct: 433 --------IAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGR--- 481
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGC 467
V H + + G ++ ++D+ + G +E+ + M S W A++ C
Sbjct: 482 --VFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGAC 539
Query: 468 A 468
+
Sbjct: 540 S 540
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 83/215 (38%), Gaps = 45/215 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D L +C + ++ +H I + + + L+D+YAKCG L A +VF
Sbjct: 359 DEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVF 418
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++V+ W ++M++G H R A+
Sbjct: 419 YSVEERDVYVW-------------------------------SAMIAGLGMHGRGKAAID 447
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M + +F + L AC AG VD F V+ ++ + ++ +
Sbjct: 448 LFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHY------A 501
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVS-WNSLI 224
++D+ G+ G + A + + M S W +L+
Sbjct: 502 CMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/673 (35%), Positives = 368/673 (54%), Gaps = 72/673 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ + FA SC + ++HA +K+ F + + +D+YAKC + ARKV
Sbjct: 269 VSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKV 328
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ N P R S N+++ G+A+ D+ EAL
Sbjct: 329 FNTFPN-----------------------------PTRQ--SHNALIVGYARQDQVLEAL 357
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + E S AL+AC+ + G Q+H L K ++ + + ++DMY
Sbjct: 358 EIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMY 417
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A +FD M ++ VSWN++I +EQN + L +FV M+ S +EPD+ T
Sbjct: 418 AKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFG 477
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SVV ACA A G+++H R+++ + D +G+A++DMY KCG L EA + +R+
Sbjct: 478 SVVKACAGKKALNYGMEVHGRVIK-SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE- 535
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
ER VSWN++I+G++ + E AL F +
Sbjct: 536 ------------------------------ERTTVSWNSIISGFSSEKQGENALSYFSRM 565
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P ++T+ +L+ CANLA ++LG+Q H ++K L SD+++ ++++DMY
Sbjct: 566 LQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLH------SDVYIASTIVDMY 619
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D +FE +RD+V+W+AMI A +G G +A+ LF++M L KP+H I
Sbjct: 620 SKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFI 679
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+H G V++G YF M +GL P +HY+CMVDLLGR+G ++EA LIE+MP
Sbjct: 680 SVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPF 739
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D VIW +LL C++ N+ + E A LL+++P +S YVLLSN+YA G WGEV ++
Sbjct: 740 EADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKI 799
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+ + K+PGCSWI++ V+ F+V DK HP ++EIY +L EMK GYVP
Sbjct: 800 RSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEI 859
Query: 677 SD---DEAYEEQN 686
DE +EQ+
Sbjct: 860 DGFLLDEEVDEQD 872
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 288/581 (49%), Gaps = 78/581 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA +L +C + +VH I+ F S++ L+D+Y+ C L A +F
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF 228
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +N W+++I +G+ ++DRF+E L
Sbjct: 229 CEMPERNSVCWSAVI-------------------------------AGYVRNDRFTEGLK 257
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ M E +S+ +F SA +CAG F++GTQ+HA K+ + D +G+A +DMY
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC R+ AR+VF+ S N+LI Y + +ALE+F + S ++ DE++L+
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSG 377
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++AC+++ + EG+Q+H ++C L ++ + N ++DMYAKCG L EA +FD M I+
Sbjct: 378 ALTACSAIKGYLEGIQLHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFDDMEIK 436
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ VS WNA+IA + QN EE L LF +
Sbjct: 437 DAVS-------------------------------WNAIIAAHEQNEHVEETLALFVSML 465
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R ++ P YTFG+++ ACA L G + H V+K G+ D FVG+++IDMY
Sbjct: 466 RSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL------DWFVGSAIIDMYC 519
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + + +I E + ER VSWN++I G + G AL F +ML G PD+ T
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ VE G++ + K L D Y + +VD+ + G + +++ + E P
Sbjct: 580 VLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
+ D V W +++ A H LGE K E++ N P
Sbjct: 637 -KRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKP 673
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 215/480 (44%), Gaps = 85/480 (17%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ G Q HA ++ + + V++ + L+ Y KC ++ A VFD M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 213 RERNIVSWNSLI-------------------------------TCYEQNGPASDALEVFV 241
+R+++SWN++I +CY QNG ++E+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M I+ D T A V+ AC + + GLQ+H ++ +D+V G ALVDMY+ C
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQM-GFDSDVVTGTALVDMYSTC 218
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
KL+ A +F MP RN V ++++ AGY
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVI-------------------------------AGYV 247
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+N E L L++++ E + + TF + +CA L+ +LG Q H + +K +
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGY--- 304
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
D VG + +DMY KC + D ++F T S NA+IVG A+ EAL +F+
Sbjct: 305 ---DNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFR 361
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL--KDHYTC----MV 535
+ D +++ G L ACS EG + HGLA D C ++
Sbjct: 362 SLQKSYLDFDEISLSGALTACSAIKGYLEGIQL-------HGLAVKCGLDFNICVANTIL 414
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI--MLGEYVAKKLLEIEPSN 593
D+ + G L EA + + M ++ DAV W +++AA + + ++ L +V+ +EP +
Sbjct: 415 DMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDD 473
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 7/262 (2%)
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
++T + + C++L A G Q HA++ + + N L+ Y KC LN A VF
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQI-TVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVF 96
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D+MP R+V+S +M+ GYA +++ A+ +F M ER+VVSWN++++ Y QNG + +++
Sbjct: 97 DKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIE 156
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+F ++ + + TF +L AC + D LG Q H ++ G +SD+ G +
Sbjct: 157 IFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGF------DSDVVTGTA 210
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY C ++ IF M ER+ V W+A+I G +N TE L L+K ML G
Sbjct: 211 LVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVS 270
Query: 492 HVTMIGVLCACSHAGLVEEGRK 513
T +C+ E G +
Sbjct: 271 QATFASAFRSCAGLSAFELGTQ 292
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 380/657 (57%), Gaps = 39/657 (5%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
+I+K S++ + N +I Y + G L AR +FD+M +N +W+++I+GL+K+G +++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ F P ++ SW + +SGF ++ EAL F ++ ++ +F S + AC
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196
Query: 164 SVDFKMGTQVHALLSKSRYSS-------------------------------DVYMGSAL 192
DF +G + L+ K+ + DV +A+
Sbjct: 197 LGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAI 256
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D Y + G + ARR+FD M ERN +SW+++I Y Q+G A +AL++F +M+ G +P+
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
A +SA ASL A G+ IH + + + D+ +G++L+D+Y KCGK ++ R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ +NVV SMV GY+ ++ +F + E+N VSW +IAGY +N + E+ L +
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEV 435
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L P TF ++L ACA++A L G H ++K G+++ DIFVG +L
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY------DIFVGTAL 489
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPD 491
DMY KCG + ++FE M E++ +SW MI G A++G+ E+L LF++M E P+
Sbjct: 490 TDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN 549
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ ++ VL ACSH GLV++G YF+SM K +G+ P HYTC+VDLL R+G L EA+ I
Sbjct: 550 ELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFI 609
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
+P QP+A W +LL+ CK +++ + E AKKL ++ +NS YVLLSN+YA GRW
Sbjct: 610 RTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWI 669
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+V +RKLMR++G+ K GCSW+E+ V+ F +D H + EIY L++L EMK
Sbjct: 670 DVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEMK 726
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 236/493 (47%), Gaps = 106/493 (21%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKC------------------------------ 199
G +HA L K+ +SS Y+ L+ +Y C
Sbjct: 40 GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
Query: 200 -GRVSCARRVFDGMRERNIVSWNSL-------------------------------ITCY 227
G + AR +FD M ERN VSW++L I+ +
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+NG +AL++F R++ SG+ P++VT SVV AC L F G+ I +++ +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA-GFEHY 218
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
L + N+L+ + + G+++ AR VFDRM R+VVS T+++ Y + ++ AR +F +M E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
RN +SW+A+IA Y+Q+G EEAL LF + +E P F L+A A+L L G
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINI 338
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H HV K G+ + D+F+G+SLID+Y KCG +DG +F+ ++E++ V WN+M+ G
Sbjct: 339 HGHVTKIGI------DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGY 392
Query: 468 AQNG-------------------YGT------------EALGLFKKMLLCGEKPDHVTMI 496
+ NG +GT + L +F +L+ G+ P+ T
Sbjct: 393 SINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFS 452
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAM 554
VLCAC+ +++G + K L D + T + D+ + G + +K + E M
Sbjct: 453 SVLCACASIASLDKGMNVHGKIIK---LGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 555 PMQPDAVIWGSLL 567
P + + + W ++
Sbjct: 510 P-EKNEISWTVMI 521
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 154/297 (51%), Gaps = 1/297 (0%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA L + +++S +H + K ++FI + LID+Y KCG R VFD +
Sbjct: 319 FACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLIL 378
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
KNV WNS++ G G +++ LF +PE++ SW ++++G+ ++++ + L F
Sbjct: 379 EKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNT 438
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ ++ +F S L ACA G VH + K D+++G+AL DMY KCG
Sbjct: 439 LLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGD 498
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVS 260
+ +++VF+ M E+N +SW +I ++G A ++L +F M S + P+E+ L SV+
Sbjct: 499 IGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLF 558
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
AC+ +GL + + ++ +VD+ ++ G+L EA +P +
Sbjct: 559 ACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F+ +L +C S+ VH +IIK +IF+ L D+YAKCG + +++VF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
++M KN +W +I GL + GF ++ LF M + + N ++
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/672 (36%), Positives = 375/672 (55%), Gaps = 71/672 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C ++ ++ H+ IK+ +S+I ++ L+D+Y KC + A + F
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF 430
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+NV W N M+ + D +E+
Sbjct: 431 LSTETENVVLW-------------------------------NVMLVAYGLLDNLNESFK 459
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E +++++ S L C+ +G Q+H + K+ + +VY+ S LIDMY
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 519
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A ++F ++E+++VSW ++I Y Q+ ++AL +F M GI D + AS
Sbjct: 520 KLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFAS 579
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A +G QIHA+ +DL +GNALV +YA+CGK
Sbjct: 580 AISACAGIQALNQGQQIHAQAC-VSGYSDDLSVGNALVSLYARCGK-------------- 624
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V+ A F K+ ++ +SWN+LI+G+ Q+G EEAL LF +
Sbjct: 625 -----------------VRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMS 667
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ +TFG ++A AN+A+++LG+Q H ++K +G +S+ V N LI +Y
Sbjct: 668 KAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIK------TGHDSETEVSNVLITLYA 721
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+++D R F M E++ +SWNAM+ G +Q+G+G +AL LF+ M G P+HVT +G
Sbjct: 722 KCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVG 781
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV+EG KYF SM + HGL P +HY C+VDLLGR+G L A+ +E MP+Q
Sbjct: 782 VLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQ 841
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA++ +LL+AC VH+NI +GE+ A LLE+EP +S YVLLSNMYA G+WG R R
Sbjct: 842 PDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTR 901
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP--N 675
++M+ RGV K+PG SWIE+ V+ F D++HP +IY L+ L GY+P N
Sbjct: 902 QMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTN 961
Query: 676 ASDDEAYEEQNG 687
+ ++A Q G
Sbjct: 962 SLLNDAERRQKG 973
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 261/532 (49%), Gaps = 71/532 (13%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
++HAR I + + +F+ N LID+Y K
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDLY-------------------------------FK 217
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
GF++ A ++F + +RD SW +M+SG +Q EA+ F +MH+ + Y F S
Sbjct: 218 NGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSV 277
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
LSAC +K+G Q+H L+ K +S + Y+ +AL+ +Y + G A +VF+ M +R+
Sbjct: 278 LSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDE 337
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VS+NSLI+ Q G + ALE+F +M ++PD VT+AS++SAC+S+ A G Q H+
Sbjct: 338 VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSY 397
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ + +D++L AL+D+Y KC S +K+
Sbjct: 398 AIKA-GMSSDIILEGALLDLYVKC-------------------------------SDIKT 425
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
A F NVV WN ++ Y E+ +F ++ E + P +T+ ++L C++
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L + LG Q HT V+K G +F +++V + LIDMY K G ++ +IF + E+D
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQF------NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSW AMI G AQ+ EAL LFK+M G D++ + AC+ + +G++ +
Sbjct: 540 VSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ-IHA 598
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ G + +V L R G + +A + + D + W SL++
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 260/560 (46%), Gaps = 72/560 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S + LLD CL S SD ++H +I+K F +E+ + RL+D+Y G L GA VF
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ MP R WN ++ F LG
Sbjct: 127 DE-------------------------------MPVRPLSCWNKVLHRFVAGKMAGRVLG 155
Query: 138 YFVKMHSENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E E ++ L C G V F ++HA Y + +++ + LID+Y
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G ++ A++VFDG+++R+ VSW ++++ Q+G +A+ +F +M SG+ P +
Sbjct: 216 FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC + +K G Q+H +++ + + + NALV +Y++ G A VF+ M
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLK-QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ 334
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+ VS S++S G +Q G +++AL LF+ +
Sbjct: 335 RDEVSYNSLIS-------------------------------GLSQQGYSDKALELFKKM 363
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P T +LL+AC+++ L +G+Q H++ +K G+ SDI + +L+D+Y
Sbjct: 364 CLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGM------SSDIILEGALLDLY 417
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+KC ++ F + + V WN M+V E+ +F +M + G +P+ T
Sbjct: 418 VKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYP 477
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L CS V+ G + + + K G + ++D+ + G LD A + +
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK- 535
Query: 557 QPDAVIWGSLLAACKVHRNI 576
+ D V W +++A H
Sbjct: 536 EKDVVSWTAMIAGYAQHEKF 555
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 237/516 (45%), Gaps = 78/516 (15%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L C S F G ++H + K + ++V + L+D+Y G + A VFD M R +
Sbjct: 75 LDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPL 134
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHA 276
WN ++ + A L +F RM+ ++PDE T A V+ C F +IHA
Sbjct: 135 SCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHA 194
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R + N L + N L+D+Y K G LN A+ VFD + R+ VS +M+SG
Sbjct: 195 RTI-THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSG-------- 245
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+Q+G EEA+ LF + V PT Y F ++L+AC
Sbjct: 246 -----------------------LSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACT 282
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ ++G Q H V+K G + +V N+L+ +Y + G+ ++F M++RD
Sbjct: 283 KVEFYKVGEQLHGLVLKQGFSL------ETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VS+N++I G +Q GY +AL LFKKM L KPD VT+ +L ACS G + G+++ S
Sbjct: 337 EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHS 396
Query: 517 -----SMSKEHGL-APLKDHYTCMVDL------------------------LGRAGCLDE 546
MS + L L D Y D+ G L+E
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNE 456
Query: 547 AKTLIEAMPM---QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE-PSNSGPYVLLSN 602
+ + M M +P+ + S+L C R + LGE + ++L+ N +L +
Sbjct: 457 SFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLID 516
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
MYA+LG+ +++ + ++++ VV SW ++
Sbjct: 517 MYAKLGKLDHALKIFRRLKEKDVV-----SWTAMIA 547
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/676 (34%), Positives = 379/676 (56%), Gaps = 57/676 (8%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ + +L C KS+ D RR+H+ I + + + ++L+ +Y CG L R++
Sbjct: 99 LELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 77 FDKMSNKNVFTWNSIITGLLKWG------------------FIDDASRLFASMPERDQCS 118
FDK++N+ VF WN ++ G K G ++ A +LF + +RD S
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WNSM+SG+ + + L F +M + S ++ C+ + +G +H
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAI 278
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K+ + ++ + + L+DMY K G ++ A +VF+ M ER++VSW S+I Y + G + ++
Sbjct: 279 KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M GI PD T+ +++ ACA + G +H ++ K+++DL + NAL+DMY
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH-NYIKENKMQSDLFVSNALMDMY 397
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AKCG + +A V F++M +++VSWN +I
Sbjct: 398 AKCGSMGDAHSV-------------------------------FSEMQVKDIVSWNTMIG 426
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY++N EAL LF ++ S P T +L ACA+LA L+ G++ H H++++G
Sbjct: 427 GYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSL 485
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
D V N+L+DMY+KCG++ +F+ + E+D VSW MI G +GYG+EA+
Sbjct: 486 ------DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIA 539
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
F +M G +PD V+ I +L ACSH+GL++EG +F+ M + P +HY C+VDLL
Sbjct: 540 AFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLL 599
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
RAG L +A I+ MP++PDA IWG+LL C+++ ++ L E VA+ + E+EP N+G YV
Sbjct: 600 ARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYV 659
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LL+N+YAE +W EV ++R+ + +RG+ K PGCSWIEI G V++F+ D HPL +I L
Sbjct: 660 LLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 719
Query: 659 VLKMLTREMKRVGYVP 674
+LK MK G+ P
Sbjct: 720 LLKKTRTRMKEEGHFP 735
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/624 (37%), Positives = 361/624 (57%), Gaps = 18/624 (2%)
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD S +FT L +D A ++F +P + +WN+++ FA + + L
Sbjct: 60 FDPPSATKLFT----ACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGL 115
Query: 137 GYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F++M H + Y+F + A G +H ++ K+ + SD+++ ++LI
Sbjct: 116 LVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHF 175
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y G + A VF + E++IVSWNS+I+ + Q G +AL++F RM P+ VT+
Sbjct: 176 YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTM 235
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SACA + G + R + +L+L NA++DMY KCG L +AR +FD+M
Sbjct: 236 VGVLSACAKRIDLEFGRWACDYIER-NGIDINLILSNAMLDMYVKCGSLEDARRLFDKME 294
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++VS T+M+ GYAK +AR +F M ++ +WNALI+ Y QNG+ +EAL +FR
Sbjct: 295 EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE 354
Query: 376 LK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
L+ ++ P T + L ACA L + LG H ++ K G++ + + SLID
Sbjct: 355 LQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKL------NFHITTSLID 408
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG +E +F ++ RD W+AMI G A +G+G A+ LF KM KP+ VT
Sbjct: 409 MYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVT 468
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+LCACSH+GLV+EGR +F+ M +G+ P HY CMVD+LGRAGCL+EA LIE M
Sbjct: 469 FTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKM 528
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P+ P A +WG+LL AC+++ N+ L E +LLE + +N G YVLLSN+YA+ G+W V
Sbjct: 529 PIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVS 588
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R+R+ M+ G+ K+PGCS IE+ G ++ F+V D HPL+ EIY L + +K GYV
Sbjct: 589 RLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVS 648
Query: 675 NASD-----DEAYEEQNGSNSTSD 693
+ S +E Y +++ N S+
Sbjct: 649 DESHLLQFVEEEYMKEHALNLHSE 672
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 215/485 (44%), Gaps = 101/485 (20%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F +S F ++ + S+ + +H ++K+ F S++FI N LI Y+ G L A
Sbjct: 128 FPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYL 187
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF K+ K++ +WNS+I+G ++ G PE EA
Sbjct: 188 VFSKIVEKDIVSWNSMISGFVQGG-----------SPE--------------------EA 216
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L F +M EN + + LSACA +D + G + ++ ++ + +A++DM
Sbjct: 217 LQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDM 276
Query: 196 YGKCGRVSCARRVFDGMRERNIVS-------------------------------WNSLI 224
Y KCG + ARR+FD M E++IVS WN+LI
Sbjct: 277 YVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALI 336
Query: 225 TCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y+QNG +AL +F + + +P+EVTLAS ++ACA L A G IH + + +
Sbjct: 337 SSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK-QG 395
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
++ + + +L+DMY+KCG L +A VF + R+V ++M++G A
Sbjct: 396 IKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLA------------- 442
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+G A+ LF ++ V P TF NLL AC++ +
Sbjct: 443 ------------------MHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDE 484
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNA 462
GR + + +R + G ++D+ + G +E+ + E M S W A
Sbjct: 485 GR-----LFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGA 539
Query: 463 MIVGC 467
++ C
Sbjct: 540 LLGAC 544
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/736 (33%), Positives = 396/736 (53%), Gaps = 106/736 (14%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ D ++ + + +L++C SK++ +H+ I + +S++ I N LI +YA+CG
Sbjct: 375 QMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG 434
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L AR+ LF +MP+RD SWN++++G+A+
Sbjct: 435 DLPRARE-------------------------------LFNTMPKRDLISWNAIIAGYAR 463
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ EA+ + +M SE +F LSAC S + G +H + +S S+ ++
Sbjct: 464 REDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHL 523
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+AL++MY +CG + A+ VF+G R R+I+SWNS+I + Q+G A ++F+ M G+
Sbjct: 524 ANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGL 583
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLM-------------------RCEKLRN--- 286
EPD++T ASV+ C + A + G QIH ++ RC L++
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE 643
Query: 287 --------DLVLGNALVDMYAKCGKLNEARCVFDRM------PIRNVVSE---------- 322
+++ A++ +A G+ +A +F +M P+++ S
Sbjct: 644 VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSAC 703
Query: 323 -----------------------TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
+++S Y+K+ S+ AR +F KM R+++SWN +IAG
Sbjct: 704 LDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAG 763
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Y QNG AL ++ + V ++F ++LNAC++ + L+ G++ H +VK +
Sbjct: 764 YAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKM--- 820
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ D+ VG +LI MY KCGS+E+ +F+ E++ V+WNAMI AQ+G ++AL
Sbjct: 821 ---QGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDF 877
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F M G KPD T +L AC+H+GLV EG + FSS+ +HGL+P +HY C+V LLG
Sbjct: 878 FNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
RAG EA+TLI MP PDA +W +LL AC++H N+ L E+ A L++ N YVL
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVL 997
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLV 659
LSN+YA GRW +V ++R++M RG+ K+PG SWIE+ ++ F+ D+ HP EIY
Sbjct: 998 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEE 1057
Query: 660 LKMLTREMKRVGYVPN 675
LK L+ EM+R GY P+
Sbjct: 1058 LKRLSLEMERAGYSPD 1073
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/578 (28%), Positives = 285/578 (49%), Gaps = 76/578 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ + + L+ +C R +S+++ +R+HA+++++ +IF+ N LI++Y KC
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS-------- 132
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ DA ++F MP RD SWNS++S +AQ +A
Sbjct: 133 -----------------------VSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQ 169
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + F S+ ++ S L+AC + + G ++H+ + ++ Y D + ++L++MYG
Sbjct: 170 LFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYG 229
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + AR+VF G+ R++VS+N+++ Y Q + + +F +M + GI PD+VT +
Sbjct: 230 KCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYIN 289
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A + + EG +IH +L E L +D+ +G AL M+ +CG
Sbjct: 290 LLDAFTTPSMLDEGKRIH-KLAVNEGLNSDIRVGTALATMFVRCG--------------- 333
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V A+ +R+VV +NALIA Q+G EEA + ++
Sbjct: 334 ----------------DVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V T+ ++LNAC+ L G H+H+ + G SD+ +GNSLI MY
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE------VGHSSDVQIGNSLISMYA 431
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG + +F TM +RD +SWNA+I G A+ EA+ L+K+M G KP VT +
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+++ +G+ + + G+ ++++ R G + EA+ + E +
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D + W S++A H G Y A L +E G
Sbjct: 551 -DIISWNSMIAGHAQH-----GSYEAAYKLFLEMKKEG 582
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 280/552 (50%), Gaps = 71/552 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + LLD+ + + +R+H + S+I + L ++ +CG + GA++
Sbjct: 283 DKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQAL 342
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +RD +N++++ AQH + EA
Sbjct: 343 E-------------------------------AFADRDVVVYNALIAALAQHGHYEEAFE 371
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M S+ ++ ++ S L+AC+ S G +H+ +S+ +SSDV +G++LI MY
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + AR +F+ M +R+++SWN++I Y + +A++++ +M + G++P VT
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC + +A+ +G IH ++R ++++ L NAL++MY +CG + EA+ VF+ R
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILR-SGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++S SM++G+A Q+G E A LF +K
Sbjct: 551 DIISWNSMIAGHA-------------------------------QHGSYEAAYKLFLEMK 579
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E + P TF ++L C N L+LGRQ H +++ GL+ D+ +GN+LI+MY+
Sbjct: 580 KEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQL------DVNLGNALINMYI 633
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CGS++D +F ++ R+ +SW AMI G A G +A LF +M G KP T
Sbjct: 634 RCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSS 693
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC + ++EG+K + + G ++ ++G + +A+ + + MP +
Sbjct: 694 ILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSKSGSMTDARKVFDKMPNR 752
Query: 558 PDAVIWGSLLAA 569
D + W ++A
Sbjct: 753 -DIMSWNKMIAG 763
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/732 (34%), Positives = 394/732 (53%), Gaps = 106/732 (14%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D L+ + + +L++C SK++ + +H+ I + +S++ I N LI +YA+CG L
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR+ LF +MP+RD SWN++++G+A+ +
Sbjct: 384 ARE-------------------------------LFYTMPKRDLISWNAIIAGYARREDR 412
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA+ + +M SE +F LSACA S + G +H + +S S+ ++ +AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
++MY +CG + A+ VF+G + R+++SWNS+I + Q+G A ++F M +EPD
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 253 VTLASVVSACASLAAFKEGLQIHARL-------------------MRCEKLRN------- 286
+T ASV+S C + A + G QIH R+ +RC L++
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS 592
Query: 287 ----DLVLGNALVDMYAKCGKLNEARCVFDRM------PIRNVVSE-------------- 322
D++ A++ A G+ +A +F +M P+++ S
Sbjct: 593 LQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEG 652
Query: 323 -------------------TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+++S Y+K+ S+ AR +F KM R++VSWN +IAGY QN
Sbjct: 653 KKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQN 712
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G + A+ ++ + V P ++F +LLNAC++ + L+ G++ H +VK L +
Sbjct: 713 GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKL------Q 766
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
D+ VG +LI MY KCGS + +F+ ++E++ V+WNAMI AQ+G ++ALG F M
Sbjct: 767 GDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCM 826
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
G KPD T +L AC+HAGLV EG + FSSM E+G+ P +HY C+V LLGRA
Sbjct: 827 EKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARR 886
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNM 603
EA+TLI MP PDA +W +LL AC++H NI L E+ A L++ N Y+LLSN+
Sbjct: 887 FQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNV 946
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
YA GRW +V ++R++M RG+ K+PG SWIE+ ++ F+ D+ HP EIY LK L
Sbjct: 947 YAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRL 1006
Query: 664 TREMKRVGYVPN 675
+ EM+ GY P+
Sbjct: 1007 SVEMEEAGYFPD 1018
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 293/583 (50%), Gaps = 83/583 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ + + LL +C R + + + +R+HA+++++ +IF+ N LI++Y KC R V
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKC------RSVL 79
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D A ++F MP RD SWNS++S +AQ +A
Sbjct: 80 D-------------------------AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQ 114
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + F ++ ++ S L+AC + + G ++H+ + K+ Y D + ++L+ MYG
Sbjct: 115 LFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG 174
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR+VF G+ R++VS+N+++ Y Q + L +F +M + GI PD+VT +
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A + + EG +IH +L E L +D+ +G ALV M +CG ++ A+ F
Sbjct: 235 LLDAFTTPSMLDEGKRIH-KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF------ 287
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
G A +R+VV +NALIA Q+G N EA + ++
Sbjct: 288 ---------KGTA----------------DRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V T+ ++LNAC+ L+ G+ H+H+ + G SD+ +GN+LI MY
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE------DGHSSDVQIGNALISMYA 376
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG + +F TM +RD +SWNA+I G A+ EA+ L+K+M G KP VT +
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+++ +G+ + + G+ ++++ R G L EA+ + E +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 558 PDAVIWGSLLAACKVHRNIMLGEY-VAKKLL------EIEPSN 593
D + W S++A H G Y A KL E+EP N
Sbjct: 496 -DVISWNSMIAGHAQH-----GSYETAYKLFQEMQNEELEPDN 532
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 269/488 (55%), Gaps = 40/488 (8%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N ++ +++T ++ G +D A + F +RD +N++++ AQH EA + +
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR 320
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S+ AL+ ++ S L+AC+ S + G +H+ +S+ +SSDV +G+ALI MY +CG
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +F M +R+++SWN++I Y + +A+ ++ +M + G++P VT ++SA
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+ +A+ +G IH ++R ++++ L NAL++MY +CG L EA+ VF+ R+V+S
Sbjct: 441 CANSSAYADGKMIHEDILR-SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS 499
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM++G+A+ S ++A +F +M QN E E
Sbjct: 500 WNSMIAGHAQHGSYETAYKLFQEM----------------QNEELE-------------- 529
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + TF ++L+ C N L+LG+Q H + + GL+ D+ +GN+LI+MY++CGS
Sbjct: 530 -PDNITFASVLSGCKNPEALELGKQIHGRITESGLQL------DVNLGNALINMYIRCGS 582
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++D +F ++ RD +SW AMI GCA G +A+ LF +M G +P T +L
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKV 642
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ + ++EG+K + + G ++ ++G + +A+ + + MP + D V
Sbjct: 643 CTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR-DIV 700
Query: 562 IWGSLLAA 569
W ++A
Sbjct: 701 SWNKIIAG 708
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/659 (38%), Positives = 367/659 (55%), Gaps = 71/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C + R++HA ++KS+F + I QN LI +Y K
Sbjct: 163 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTK----------- 211
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
SN I DA +F+ M RD SW SM++GF+Q EAL
Sbjct: 212 ---SN-----------------LIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251
Query: 138 YFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
YF +M H + +E+ FGS SAC+ + + G Q+H + K DV+ G +L DMY
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMY 311
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG +SCAR VF + ++V+WN++I + G A +A+ F +M G+ PDE+T+
Sbjct: 312 AKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVR 371
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC S + +G+Q+H + + L D+ + N L+ MYAKC
Sbjct: 372 SLLCACTSPSELYQGMQVHGYINKM-GLDLDVPVCNTLLTMYAKC--------------- 415
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRL 375
S ++ A F +M ++VSWNA++ ++ + EE L +L
Sbjct: 416 ----------------SELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKL 459
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P + T N+L A A +++G Q H + +K GL D V N LID+
Sbjct: 460 MCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN------CDTSVTNGLIDL 513
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS++ +IF++M+ D VSW+++I+G AQ GYG EAL LFK M KP+HVT
Sbjct: 514 YAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTF 573
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSH GLVEEG K + +M KE G+AP ++H +CMVDLL RAGCL+EA+ I M
Sbjct: 574 VGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMA 633
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
PD V+W +LLAACK H N+ +G+ A+ +L+I+PSNS +VLL N+YA G W +V R
Sbjct: 634 FDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVAR 693
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+R LM++RGV K PG SWIE+ ++VF V+D HP +IY +L+ L +M GYVP
Sbjct: 694 LRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVP 752
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/508 (30%), Positives = 247/508 (48%), Gaps = 50/508 (9%)
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQ 172
R + S N ++ + F+EA+ F + + F L+ ++ +SAC+ + G +
Sbjct: 25 RAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKK 84
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+H + KS+ D+ + + +++MYGKC + A++VFD M ERN+VSW S+I Y QNG
Sbjct: 85 IHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQ 144
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ALE + +M+ SG+ PD+ T S++ AC+SL G Q+HA +++ E ++ N
Sbjct: 145 GGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSE-FGAHIIAQN 203
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
AL+ MY K + +A VF RM R+++S SM++G+++ A F +ML + V
Sbjct: 204 ALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV-- 261
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
P + FG++ +AC++L + GRQ H +
Sbjct: 262 ----------------------------YLPNEFIFGSVFSACSSLLQPEYGRQLHGMSI 293
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K GL D+F G SL DMY KCG + +F + D V+WNA+I G A G
Sbjct: 294 KFGL------GRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGD 347
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EA+ F +M G PD +T+ +LCAC+ + +G + ++K + D
Sbjct: 348 AKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINK---MGLDLDVPV 404
Query: 533 CMVDLLGRAGC--LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
C L A C L +A E M D V W ++L AC H E V + L +
Sbjct: 405 CNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ---AEEVFRLLKLMC 461
Query: 591 PSNSGP-YVLLSNMYAELGRWGEVVRVR 617
S P Y+ L+N+ LG E V +
Sbjct: 462 ISQHRPDYITLTNV---LGASAETVSIE 486
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/653 (39%), Positives = 356/653 (54%), Gaps = 69/653 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +LD+C + + HA++IK F S+ I L+ +Y K G + GAR+VFD
Sbjct: 165 FLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD--- 221
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
GL K RD ++N M+ G+A+ +A F +
Sbjct: 222 ------------GLYK----------------RDVSTFNVMIGGYAKSGDGEKAFQLFYR 253
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E F + SF S L C+ G VHA + DV + +ALI MY CG
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGS 313
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARRVFD M+ R++VSW +I Y +N DA +F M GI+PD +T +++A
Sbjct: 314 IEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINA 373
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS A +IH++++R DL++ ALV MYA
Sbjct: 374 CASSADLSLAREIHSQVVRA-GFGTDLLVDTALVHMYA---------------------- 410
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
K ++K AR +F M R+VVSW+A+I Y +NG EEA F L+KR +V
Sbjct: 411 ---------KCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T+ NLLNAC +L L LG + +T +K L S I VGN+LI+M +K GS
Sbjct: 462 EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADL------VSHIPVGNALINMNVKHGS 515
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E IFE MV+RD V+WN MI G + +G EAL LF +ML +P+ VT +GVL A
Sbjct: 516 IERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSA 575
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS AG VEEGR++FS + G+ P + Y CMVDLLGRAG LDEA+ LI MP++P++
Sbjct: 576 CSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSS 635
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW +LLAAC+++ N+ + E A++ L EP + YV LS+MYA G W V +VRK+M
Sbjct: 636 IWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVME 695
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RGV K+ GC+WIE+ G ++ F+V+D+ HP EIY L L +KR GY+P
Sbjct: 696 SRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIP 748
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 279/562 (49%), Gaps = 77/562 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS + KL C+ + ++V II+S I+ N LI +++ CG + AR+
Sbjct: 59 IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD + NK V TWN+II G +AQ EA
Sbjct: 119 FDSVENKTVVTWNAIIAG-------------------------------YAQLGHVKEAF 147
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E S +F L AC+ K+G + HA + K + SD +G+AL+ MY
Sbjct: 148 ALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMY 207
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + AR+VFDG+ +R++ ++N +I Y ++G A ++F RM G +P+ ++
Sbjct: 208 VKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFL 267
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ C++ A G +HA+ M L +D+ + AL+ MY CG + AR VFD+M +
Sbjct: 268 SILDGCSTPEALAWGKAVHAQCMNT-GLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+VVS T M+ GYA+ S++ E+A GLF +
Sbjct: 327 RDVVSWTVMIRGYAENSNI-------------------------------EDAFGLFATM 355
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ E + P T+ +++NACA+ ADL L R+ H+ VV+ G +D+ V +L+ MY
Sbjct: 356 QEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGF------GTDLLVDTALVHMY 409
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D ++F+ M RD VSW+AMI +NG G EA F M +PD VT I
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEA 553
+L AC H G ++ G + ++ K A L H ++++ + G ++ A+ + E
Sbjct: 470 NLLNACGHLGALDLGMEIYTQAIK----ADLVSHIPVGNALINMNVKHGSIERARYIFEN 525
Query: 554 MPMQPDAVIWGSLLAACKVHRN 575
M +Q D V W ++ +H N
Sbjct: 526 M-VQRDVVTWNVMIGGYSLHGN 546
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + LL++C ++ ++ + IK+ S I + N LI++ K G + AR +F
Sbjct: 464 DVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIF 523
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M ++V TWN M+ G++ H EAL
Sbjct: 524 ENMVQRDVVTWN-------------------------------VMIGGYSLHGNAREALD 552
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMY 196
F +M E F + +F LSAC+ + + G + + L R + + ++D+
Sbjct: 553 LFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLL 612
Query: 197 GKCGRVSCARRVFDGMRER-NIVSWNSLI 224
G+ G + A + + M + N W++L+
Sbjct: 613 GRAGELDEAELLINRMPLKPNSSIWSTLL 641
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/570 (40%), Positives = 341/570 (59%), Gaps = 38/570 (6%)
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
LF + + + WN+M+ G +D F +A+ ++ M SE F + ++F L ACA +D
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
++G ++H L+ K + DV++ ++L+ +Y KCG + A +VFD + ++N+VSW ++I+
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y G +A+++F R++ + PD T+ V+SAC L G IH
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIH----------- 236
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+C+ + +RNV TS+V YAK +++ AR +F M
Sbjct: 237 ---------------------KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E+++VSW A+I GY NG +EA+ LF ++RE+V P YT +L+ACA L L+LG
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEW 335
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
V ++ + + +G +LID+Y KCGS+ +F+ M E+D V WNA+I G
Sbjct: 336 VSGLVDRNEFLY------NPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISG 389
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A NGY + GLF ++ G KPD T IG+LC C+HAGLV+EGR+YF+SM + L P
Sbjct: 390 LAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTP 449
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+HY CMVDLLGRAG LDEA LI MPM+ +A++WG+LL AC++HR+ L E K+L
Sbjct: 450 SIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQL 509
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
+E+EP NSG YVLLSN+Y+ +W E +VR M ++ + K PGCSWIE+ G V+ F+V
Sbjct: 510 IELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVG 569
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
DK HPL+++IY L LT++MK GYVP
Sbjct: 570 DKYHPLSEKIYAKLDELTKKMKVAGYVPTT 599
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 216/447 (48%), Gaps = 69/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C R + ++H ++K F ++F++ L+ +YAKCG
Sbjct: 115 FPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCG------------- 161
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++DA ++F +P+++ SW +++SG+ +F EA+ F +
Sbjct: 162 ------------------YLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRR 203
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ N A ++ LSAC D G +H + + +V++G++L+DMY KCG
Sbjct: 204 LLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGN 263
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VFDGM E++IVSW ++I Y NG +A+++F++M ++PD T+ V+SA
Sbjct: 264 MEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSA 323
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L A + G + + R E L N VLG AL+D+YAKCG ++ A VF M
Sbjct: 324 CARLGALELGEWVSGLVDRNEFLYNP-VLGTALIDLYAKCGSMSRAWEVFKGMK------ 376
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
E++ V WNA+I+G NG + + GLF +++ +
Sbjct: 377 -------------------------EKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGI 411
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF LL C + + GR+ + RF S S G ++D+ + G
Sbjct: 412 KPDGNTFIGLLCGCTHAGLVDEGRRYFNSMY----RFFSLTPSIEHYG-CMVDLLGRAGL 466
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGC 467
+++ ++ M +E + + W A++ C
Sbjct: 467 LDEAHQLIRNMPMEANAIVWGALLGAC 493
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 150/287 (52%), Gaps = 20/287 (6%)
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
S R +F ++ + N+ WN +I G N ++A+ + L++ E P ++TF +L
Sbjct: 60 SDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVL 119
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
ACA L DLQLG + HT VVK G + D+FV SL+ +Y KCG +ED ++F+ +
Sbjct: 120 KACARLLDLQLGVKIHTLVVKGGF------DCDVFVKTSLVCLYAKCGYLEDAHKVFDDI 173
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
+++ VSW A+I G G EA+ +F+++L PD T++ VL AC+ G + G
Sbjct: 174 PDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG- 232
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
++ E G+ T +VD+ + G +++A+++ + MP + D V WG+++ +
Sbjct: 233 EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYAL 291
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGP--YVLLSNMYA-------ELGRW 610
+ L + L+++ N P Y ++ + A ELG W
Sbjct: 292 NG---LPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEW 335
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 34/339 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++L +C + ++ +H I++ +F+ L+D+YAKC
Sbjct: 212 DSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKC---------- 261
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
G ++ A +F MPE+D SW +M+ G+A + EA+
Sbjct: 262 ---------------------GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M EN Y+ LSACA ++G V L+ ++ + + +G+ALID+Y
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYA 360
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S A VF GM+E++ V WN++I+ NG + +F ++ GI+PD T
Sbjct: 361 KCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C EG + + R L + +VD+ + G L+EA + MP+
Sbjct: 421 LLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
N + +++ + A L +++E + WN+
Sbjct: 481 ANAIVWGALLGACRIHRDTQLAELALKQLIE--LEPWNS 517
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/656 (36%), Positives = 379/656 (57%), Gaps = 39/656 (5%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
+I+K S++ + N +I Y + G L AR +FD+M +N +W+++I+GL+K+G +++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ F P ++ SW + +SGF ++ EAL F ++ ++ +F S + AC
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196
Query: 164 SVDFKMGTQVHALLSKSRYSS-------------------------------DVYMGSAL 192
DF +G + L+ K+ + DV +A+
Sbjct: 197 LGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAI 256
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D Y + G + ARR+FD M ERN +SW+++I Y Q+G A +AL++F +M+ G +P+
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
A +SA ASL A G+ IH + + + D+ +G++L+D+Y KCGK ++ R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ +NVV SMV GY+ ++ +F + E+N VSW +IAGY +N + E+ L +
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEV 435
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L P TF ++L ACA++A L G H ++K G+++ DIFVG +L
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY------DIFVGTAL 489
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPD 491
DMY KCG + ++FE M E++ +SW MI G A++G+ E+L LF++M E P+
Sbjct: 490 TDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN 549
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ ++ VL ACSH GLV++G YF+SM K +G+ P HYTC+VDLL R+G L EA+ I
Sbjct: 550 ELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFI 609
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
+P QP+A W +LL+ CK +++ + E AKKL ++ +NS YVLLSN+YA GRW
Sbjct: 610 RTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWI 669
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+V +RKLMR++G+ K GCSW+E+ V+ F +D H + EIY L++L EM
Sbjct: 670 DVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSNEIYGTLQLLRSEM 725
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 235/493 (47%), Gaps = 106/493 (21%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKC------------------------------ 199
G +HA L K+ +SS Y+ L+ +Y C
Sbjct: 40 GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
Query: 200 -GRVSCARRVFDGMRER-------------------------------NIVSWNSLITCY 227
G + AR +FD M ER N+VSW + I+ +
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+NG +AL++F R++ SG+ P++VT SVV AC L F G+ I +++ +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA-GFEHY 218
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
L + N+L+ + + G+++ AR VFDRM R+VVS T+++ Y + ++ AR +F +M E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
RN +SW+A+IA Y+Q+G EEAL LF + +E P F L+A A+L L G
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINI 338
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H HV K G+ + D+F+G+SLID+Y KCG +DG +F+ ++E++ V WN+M+ G
Sbjct: 339 HGHVTKIGI------DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGY 392
Query: 468 AQNG-------------------YGT------------EALGLFKKMLLCGEKPDHVTMI 496
+ NG +GT + L +F +L+ G+ P+ T
Sbjct: 393 SINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFS 452
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAM 554
VLCAC+ +++G + K L D + T + D+ + G + +K + E M
Sbjct: 453 SVLCACASIASLDKGMNVHGKIIK---LGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 555 PMQPDAVIWGSLL 567
P + + + W ++
Sbjct: 510 P-EKNEISWTVMI 521
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S FA L + +++S +H + K ++FI + LID+Y KCG R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ KNV WNS++ G G +++ LF +PE++ SW ++++G+ ++++ + L F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVF 436
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ ++ +F S L ACA G VH + K D+++G+AL DMY KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASV 258
G + +++VF+ M E+N +SW +I ++G A ++L +F M S + P+E+ L SV
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ AC+ +GL + + ++ +VD+ ++ G+L EA +P +
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F+ +L +C S+ VH +IIK +IF+ L D+YAKCG + +++VF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
++M KN +W +I GL + GF ++ LF M + + N ++
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/672 (36%), Positives = 373/672 (55%), Gaps = 72/672 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C + +++H+ ++K+ + + + L+D+Y KCG + A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ NV WN + L+ +G I D ++ F
Sbjct: 304 NLGDRTNVVLWNLM---LVAYGQISDLAKSFE---------------------------- 332
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++++ L C + ++G Q+H+L K+ + SD+Y+ LIDMY
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + AR++ + + +R++VSW S+I Y Q+ +AL F M G+ PD + LAS
Sbjct: 393 KYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
SACA + A ++GLQIHAR+ D+ + N LV++YA+CG+ EA
Sbjct: 453 AASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYARCGRSEEAFS-------- 503
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+F ++ ++ ++WN LI+G+ Q+ ++AL +F +
Sbjct: 504 -----------------------LFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMG 540
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ +TF + ++A ANLAD++ G+Q H VK +G S+ V N+LI +Y
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK------TGHTSETEVANALISLYG 594
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED IF M R+ VSWN +I C+Q+G G EAL LF +M G KP+ VT IG
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLVEEG YF SMS +GL P+ DHY C+VD+LGRAG LD A+ ++ MP+
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A+IW +LL+ACKVH+NI +GE AK LLE+EP +S YVLLSN YA G+W +VR
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV---P 674
K+M+ RG+ K+PG SWIE+ V+ F V D+ HPL+ +IY L L + ++GY P
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENP 834
Query: 675 NASDDEAYEEQN 686
N ++ E+++
Sbjct: 835 NLFHEKEQEQKD 846
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 252/534 (47%), Gaps = 81/534 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA + ++ I N LID+YAK G ++ AR+VF ++S+
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS------------------ 106
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
RD SW +M+SG+AQ EA + +MH + Y S LSA
Sbjct: 107 -------------RDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C F G +HA + K + S+ ++G+ALI +Y G A RVF M + V++
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q G AL++F M SG+ PD VT+AS+++ACAS+ ++G Q+H+ L++
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK 273
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ D + +L+D+Y KCG +++A
Sbjct: 274 A-GMSFDYITEGSLLDLYVKCG-------------------------------DIETAHD 301
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F NVV WN ++ Y Q + ++ +F ++ + P +T+ +L C
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQ 361
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++LG Q H+ +K+G ESD++V LIDMY K G ++ +I E + +RD VSW
Sbjct: 362 IELGEQIHSLSIKNGF------ESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSW 415
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-----HAGLVEEGRKYF 515
+MI G Q+ + EAL FK+M CG PD++ + AC+ GL R Y
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S + + + + +V+L R G +EA +L + D + W L++
Sbjct: 476 SGYAADISI------WNTLVNLYARCGRSEEAFSLFREIE-HKDEITWNGLISG 522
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/670 (37%), Positives = 374/670 (55%), Gaps = 54/670 (8%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + S +A +L SC + ++HA +KS FA++ ++ +D+YAKC + A+
Sbjct: 235 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 294
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FDK N N ++N++IT G++Q + +
Sbjct: 295 ILFDKSENLNRQSYNAMIT-------------------------------GYSQEEHGFK 323
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F ++ S E S ACA G Q++ L KS S DV + +A ID
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAID 383
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKC ++ A RVFD MR R+ VSWN++I +EQNG + L +FV M+ S IEPDE T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
SV+ AC + G++IH+ +++ N V G +L+DMY+KCG + EA + R
Sbjct: 444 FGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSV-GCSLIDMYSKCGMIEEAEKIHSRF 501
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R VS T ++ M K L+ VSWN++I+GY ++E+A LF
Sbjct: 502 FQRTNVSGT-----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + P +T+ +L+ CANLA LG+Q H V+K L +SD+++ ++L+D
Sbjct: 551 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL------QSDVYISSTLVD 604
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + D +FE + RD+V+WNAMI G A +G G EA+ LF++M+L KP+HVT
Sbjct: 605 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 664
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I +L AC+H GL+++G +YF M +++GL P HY+ MVD+LG++G + A LI M
Sbjct: 665 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 724
Query: 555 PMQPDAVIWGSLLAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
P + D VIW +LL C +HR N+ + E LL ++P +S Y LLSN+YA+ G W +V
Sbjct: 725 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 784
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV--- 670
+R+ MR + K+PGCSW+E+ ++VF+V DK HP +EIY L ++ EMK
Sbjct: 785 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDS 844
Query: 671 GYVPNASDDE 680
+VP +E
Sbjct: 845 SFVPGVEVEE 854
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 257/523 (49%), Gaps = 42/523 (8%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
C + ++ ++ HA +I S F F+ N L+ VY A VFD+M ++V +W
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N +I G K + AS F MP RD SWNSM+SG+ Q+ +++ FV M
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+F L C+ D +G Q+H ++ + +DV SAL+DMY K R + RV
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F G+ E+N VSW+++I QN S AL+ F M + ASV+ +CA+L+
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ G Q+HA ++ + D ++ A +DMYAKC + +A+ +FD+ N S +M++G
Sbjct: 256 RLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL-GLFRLLKRESVCPTHYT 387
Y++ A L+F +++ + G +E +L G+FR
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGL-------------GFDEISLSGVFR------------- 348
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
ACA + L G Q + +K L D+ V N+ IDMY KC ++ + R
Sbjct: 349 ------ACALVKGLSEGLQIYDLAIKSSLSL------DVCVANAAIDMYGKCQALAEAFR 396
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M RD VSWNA+I QNG G E L LF ML +PD T VL AC+ G
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GGS 455
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ G + SS+ K G+A ++D+ + G ++EA+ +
Sbjct: 456 LGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 265/577 (45%), Gaps = 92/577 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D FA +L C + S ++H +++ +++ + L+D+YAK + +V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + KN +W++II G + Q++ S AL
Sbjct: 196 FQGIPEKNSVSWSAIIAGCV-------------------------------QNNLLSLAL 224
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F +M N +S+ + S L +CA + ++G Q+HA KS +++D + +A +DMY
Sbjct: 225 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + A+ +FD N S+N++IT Y Q AL +F R+M+SG+ DE++L+
Sbjct: 285 AKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 344
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V ACA + EGLQI+ ++ L D+ + NA +DMY KC L EA VFD M
Sbjct: 345 GVFRACALVKGLSEGLQIYDLAIK-SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R + VSWNA+IA + QNG+ E L LF +
Sbjct: 404 R-------------------------------DAVSWNAIIAAHEQNGKGYETLFLFVSM 432
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P +TFG++L AC L G + H+ +VK SG S+ VG SLIDMY
Sbjct: 433 LRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVK------SGMASNSSVGCSLIDMY 485
Query: 437 MKCGSVEDGCRIFETMVERD--------------------WVSWNAMIVGCAQNGYGTEA 476
KCG +E+ +I +R VSWN++I G +A
Sbjct: 486 SKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
LF +M+ G PD T VL C++ G++ + + K+ + + T +VD
Sbjct: 546 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISST-LVD 604
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + G L +++ + E ++ D V W +++ H
Sbjct: 605 MYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHH 640
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/652 (36%), Positives = 377/652 (57%), Gaps = 44/652 (6%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S +A +L SC + ++HA +KS F + ++ +D+YAKC + A+++
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD N N+ S+N+M++G++Q D AL
Sbjct: 340 FDMSENLNL-------------------------------QSYNAMITGYSQKDNGFRAL 368
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F K+ + E S AL ACA G Q+H L +KS +S ++ + +A IDMY
Sbjct: 369 LLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMY 428
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKC + A RVFD M ++ VSWN++I +EQN S L + V M+ SG+EPDE T
Sbjct: 429 GKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFG 488
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ ACA + G++IH +++ N + G++LVDMY+KCG ++EA + +++ I
Sbjct: 489 SVLKACAG-DSLNHGMEIHTTIVKLGMASNPYI-GSSLVDMYSKCGMIDEAEKIHNKIFI 546
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+ +++ S + + +++ + + + ++ +VSWNA+I+GY ++E+A F +
Sbjct: 547 G--IGDSNTYSEHPE--TIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRM 602
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P +T+ +L+ CANLA + LG+Q H HV+K L++ D+++ ++L+DMY
Sbjct: 603 MEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY------DVYICSTLVDMY 656
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG++ D +FE RD+V+WNAMI G A +G G EA+ LF+ M+L P+H T +
Sbjct: 657 SKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFV 716
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L AC+H GLVE G YF M KE+GL P +HY+ MVD+LG++G +++A LI+ MP
Sbjct: 717 SLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPF 776
Query: 557 QPDAVIWGSLLAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ D VIW +LL+ACK++R N+ E A LL ++P +S Y+LLSN+YA+ G W +
Sbjct: 777 EADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASE 836
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+R MR + K+PGCSW+EI + F+V DK HP KEIY L ++ EM
Sbjct: 837 LRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYNEM 888
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 265/529 (50%), Gaps = 40/529 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C + ++ ++ HA +I S F +F+ N L+ +Y CG L A K+FD M
Sbjct: 52 FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +WN++I G + AS F MP RD SWNSM+SGF Q E++ F++
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SF L C+ ++K+GTQ+H + + Y +DV GSAL+DMY KC R
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKR 231
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ + VF M ++N +SW+++I QN L++F M G+ + ASV+ +
Sbjct: 232 LDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKS 291
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+L + G Q+HA ++ + ++ D ++ A +DMYAKC + +A+ +FD N+ S
Sbjct: 292 CATLPDLRLGTQLHAHALKSDFVK-DGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQS 350
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M++G Y+Q AL LFR L + S+
Sbjct: 351 YNAMITG-------------------------------YSQKDNGFRALLLFRKLSKSSL 379
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ L ACA + L G Q HGL S +I V N+ IDMY KC +
Sbjct: 380 GFDEISLSGALRACATVKGLSEGLQL------HGLATKSNFSRNICVANAFIDMYGKCEA 433
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+++ CR+F+ M +D VSWNA+I QN ++ L + ML G +PD T VL A
Sbjct: 434 LDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKA 493
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
C+ L G + +++ K G+A + +VD+ + G +DEA+ +
Sbjct: 494 CAGDSL-NHGMEIHTTIVKL-GMASNPYIGSSLVDMYSKCGMIDEAEKI 540
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 172/626 (27%), Positives = 284/626 (45%), Gaps = 112/626 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D+ F+ +L C ++ ++H ++ + +++ + L+D+YAKC L + V
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M KN +W++II G ++ F+D ++F
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFK--------------------------- 271
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+M +S+ + S L +CA D ++GTQ+HA KS + D + +A +DMY
Sbjct: 272 ----EMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMY 327
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + A+R+FD N+ S+N++IT Y Q AL +F ++ S + DE++L+
Sbjct: 328 AKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLS 387
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ ACA++ EGLQ+H + RN + + NA +DMY KC L+EA VFD M
Sbjct: 388 GALRACATVKGLSEGLQLHGLATKSNFSRN-ICVANAFIDMYGKCEALDEACRVFDEMG- 445
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ VSWNA+IA + QN E + L + +
Sbjct: 446 ------------------------------RKDAVSWNAIIAAHEQNEERSKTLNILVSM 475
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P YTFG++L ACA L G + HT +VK G+ S+ ++G+SL+DMY
Sbjct: 476 LRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGM------ASNPYIGSSLVDMY 528
Query: 437 MKCGSVEDGCRIF-----------------ETM----------VERDWVSWNAMIVGCAQ 469
KCG +++ +I ET+ V+ VSWNA+I G
Sbjct: 529 SKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVM 588
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+A F +M+ G PD T VL C++ + G++ + + K+ D
Sbjct: 589 RKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKE---LQYD 645
Query: 530 HYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK--- 584
Y C +VD+ + G L +++ + E P++ D V W +++ H +GE K
Sbjct: 646 VYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMICGYAHHG---MGEEAIKLFE 701
Query: 585 --KLLEIEPSNSGPYVLLSNMYAELG 608
L+ I P N +V L A +G
Sbjct: 702 SMVLMNIMP-NHATFVSLLRACAHMG 726
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 218/466 (46%), Gaps = 85/466 (18%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
++ E A S +F CA ++G Q HA + S + V++ + L+ +Y CG
Sbjct: 40 VNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGN 99
Query: 202 VSCARRVFDGMRERNIVSWNSLI-------------TCYE------------------QN 230
+ A ++FDGM R++VSWN++I C+E Q
Sbjct: 100 LGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQT 159
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G ++++VF+ M SG+E D + + ++ C+ L +K G QIH +R D+V
Sbjct: 160 GENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRM-GYDTDVVS 218
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
G+AL+DMY AK + + +F M ++N
Sbjct: 219 GSALLDMY-------------------------------AKCKRLDESFTVFYAMPQKNW 247
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SW+A+IAG QN + L +F+ +++ V + + ++L +CA L DL+LG Q H H
Sbjct: 248 ISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAH 307
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
+K S D V + +DMY KC +++D R+F+ + S+NAMI G +Q
Sbjct: 308 ALK------SDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQK 361
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G AL LF+K+ D +++ G L AC+ + EG + HGLA K +
Sbjct: 362 DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL-------HGLAT-KSN 413
Query: 531 YT-------CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++ +D+ G+ LDEA + + M + DAV W +++AA
Sbjct: 414 FSRNICVANAFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAA 458
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 385/665 (57%), Gaps = 48/665 (7%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAK-CGCLYGARKVF 77
SP + LL++C ++ + ++H++ IK+ +S +F+ +I K G +Y ARKVF
Sbjct: 37 SPIS-LLETC---NTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVF 92
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +VF WN+M+ G+++ + +
Sbjct: 93 DEIPQPSVFI-------------------------------WNTMIKGYSRINCSESGVS 121
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV--HALLSKSRYSSDVYMGSALIDM 195
+ M N ++F L + K G + HA++ S++++ I +
Sbjct: 122 LYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVI-HGFLDSNLFVQKGFIHL 180
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM--MASGIEPDEV 253
+ CG V+ AR++FD +V+WN +++ Y + ++ +F+ M + P+ V
Sbjct: 181 FSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSV 240
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL ++SAC+ L G I+ + ++ + +L+L NAL+DM+A CG+++ AR VFD
Sbjct: 241 TLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDE 300
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M R+V+S TS+V+G+A + AR F +M ER+ VSW A+I GY + +E L LF
Sbjct: 301 MKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R ++ +V P +T ++L ACA+L L+LG A T++ K+ ++ +D F+GN+LI
Sbjct: 361 RDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK------NDTFIGNALI 414
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG+VE +IF M ++D +W AMIVG A NG+G EAL +F ML PD +
Sbjct: 415 DMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEI 474
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T IGV+CAC+H GLV +G+ +FS+M+ +HG+ P HY CMVDLLGRAG L EA +I
Sbjct: 475 TYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMN 534
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP++P++++WGSLL AC+VH+N+ L E A ++LE+EP N YVLL N+YA +W +
Sbjct: 535 MPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNL 594
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
VRK+M +RG+ K PGCS +E+ G V F+ DK HP +KEIY L+ + +++ GY
Sbjct: 595 HNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYS 654
Query: 674 PNASD 678
P+ S+
Sbjct: 655 PDTSE 659
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C ++ I K++ ++ FI N LID+Y KCG + A+K+F
Sbjct: 371 DEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIF 430
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
++M K+ FTW ++I GL G ++A +F+ M E
Sbjct: 431 NEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/656 (37%), Positives = 376/656 (57%), Gaps = 40/656 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+PF LL+ C KS+S +++ ++++ + + F +RLI A C
Sbjct: 7 NPFLSLLEKC---KSISQLKQIQSQMVLTGLIEDGFASSRLI---AFCA----------- 49
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +W +D + + + + SWN + GF + EA+ +
Sbjct: 50 ---------------ISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLY 94
Query: 140 VK-MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ + + Y++ ACA +MG+++ + + SD+++ +A+I +
Sbjct: 95 KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 154
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + AR++FD R++VSWNS+I Y + G A +AL + M GI+PDEVT+ V
Sbjct: 155 CGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGV 214
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
VS+CA L G + H + L+ + L NAL+DMY KCG L AR +FD M +
Sbjct: 215 VSSCAQLEDLDLGRESHCYIEE-NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT 273
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+VS T+MV GYA++ + A +F +M +++VV WNA+I GY +EAL LF ++
Sbjct: 274 MVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQA 333
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
++ P T + L+AC+ L L +G H ++ KH L ++ +G +LIDMY K
Sbjct: 334 MNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSL------NVALGTALIDMYAK 387
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG + ++F+ + R+ ++W A+I G A +G A+ F +M+ PD VT +G+
Sbjct: 388 CGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGL 447
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC H GLVEEGRKYFS MS + L+P HY+CMVDLLGRAG L+EA+ LI++MP++
Sbjct: 448 LSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA 507
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
DAV+WG+L AC++H N+++GE A KLL+++P +SG YVLL+NMY E W E + RK
Sbjct: 508 DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARK 567
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
LMR+RGV K PGCS IE+ G V F+V+DK HP +++IY L LTR+++ V P
Sbjct: 568 LMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 623
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 216/492 (43%), Gaps = 112/492 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L +C R + + ++ F S+IF+ N +I + CG L GARK+F
Sbjct: 106 DNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMF 165
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK +++ +WNS+I G ++ G+ EAL
Sbjct: 166 DKSCVRDLVSWNSMINGYVRRGWA-------------------------------YEALN 194
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ +M E E + +S+CA D +G + H + ++ V + +AL+DMY
Sbjct: 195 FYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYM 254
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD---------- 235
KCG + AR++FD M + +VSW +++ Y Q+G P D
Sbjct: 255 KCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGG 314
Query: 236 ---------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
AL +F M A I PDEVT+ S +SAC+ L A G+ IH + + E L
Sbjct: 315 YVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE-LSL 373
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ LG AL+DMYAKCGK+ +A VF +P RN ++ T+++SG A + A F++M+
Sbjct: 374 NVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMI 433
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+ SV P TF LL+AC
Sbjct: 434 DN-------------------------------SVMPDEVTFLGLLSAC----------- 451
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWVS 459
H +V+ G ++ S S + L +D+ + G +E+ + ++M +E D V
Sbjct: 452 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 511
Query: 460 WNAMIVGCAQNG 471
W A+ C +G
Sbjct: 512 WGALFFACRIHG 523
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/612 (40%), Positives = 354/612 (57%), Gaps = 49/612 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V+ +S++ K GF+ DA +LF MPER+ SW +M+SG+A D +A+ F M
Sbjct: 152 DVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMR 211
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E +E++ S LSA V G QVH+L K+ + V + +AL+ MY KCG +
Sbjct: 212 REEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLD 271
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A R F+ ++N ++W++++T Y Q G + AL++F +M +SG+ P E TL V++AC+
Sbjct: 272 DAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACS 331
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L A EG Q+H+ + L + +A+VDMYAKCG L +
Sbjct: 332 DLCAVVEGKQMHSFAFKL-GFGLQLYVLSAVVDMYAKCGSLAD----------------- 373
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
AR F + + +VV W ++I GY QNG+ E L L+ ++ E V P
Sbjct: 374 --------------ARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIP 419
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L AC++LA L G+Q H ++K+G + ++ +G++L MY KCGS++
Sbjct: 420 NELTMASVLRACSSLAALDQGKQMHARIIKYGFKL------EVPIGSALSAMYTKCGSLD 473
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
DG IF M RD +SWNAMI G +QNG+G +AL LF+KMLL G KPD VT + +L ACS
Sbjct: 474 DGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACS 533
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GLV+ G +YF M E +AP+ +HY CMVD+L RAG L+EAK IE+ + +W
Sbjct: 534 HMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLW 593
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
LL ACK HRN LG Y +KL+E+ S YVLLS++Y LG V RVR++M+ R
Sbjct: 594 RILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKAR 653
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP--------- 674
GV K+PGCSWIE+ G V+VF+V D +HP EI L L++LT+ M GY P
Sbjct: 654 GVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQPLLDRLPETV 713
Query: 675 --NASDDEAYEE 684
N +D E +E
Sbjct: 714 IDNLTDQEGSDE 725
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 279/573 (48%), Gaps = 77/573 (13%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C +K++ R +HARI+K+ S I++ N +++YAK L A +FD +++
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDN-- 75
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE---ALGYFVK- 141
++D SWNS+++ F+Q+ S A+ F +
Sbjct: 76 ---------------------------DKDDVSWNSLINAFSQNHSSSSSSFAISLFRRM 108
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + N + ++ SA + D G Q H++ K+ S DVY+GS+L++MY K G
Sbjct: 109 MRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGF 168
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR++FD M ERN VSW ++I+ Y + A A+EVF M +E L SV+SA
Sbjct: 169 VFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA 228
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
S G Q+H+ ++ L + + NALV MYAKCG L++A F+ +N ++
Sbjct: 229 LTSDVFVYTGRQVHSLAIK-NGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSIT 287
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++MV+GYA Q G++++AL LF + V
Sbjct: 288 WSAMVTGYA-------------------------------QGGDSDKALKLFNKMHSSGV 316
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P+ +T ++NAC++L + G+Q H+ K G ++V ++++DMY KCGS
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGL------QLYVLSAVVDMYAKCGS 370
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D + FE + + D V W ++I G QNG L L+ KM + P+ +TM VL A
Sbjct: 371 LADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRA 430
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS +++G++ + + K +G + + + + G LD+ + MP + D +
Sbjct: 431 CSSLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVI 488
Query: 562 IWGSLLAACKV--HRNIMLGEYVAKKLLE-IEP 591
W ++++ H N L E K LLE I+P
Sbjct: 489 SWNAMISGLSQNGHGNKAL-ELFEKMLLEGIKP 520
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 189/366 (51%), Gaps = 63/366 (17%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+VH+ IK+ + + + N L+ +YAKCG L
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSL---------------------------- 270
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
DDA R F +++ +W++MV+G+AQ +AL F KMHS SE++ +
Sbjct: 271 ---DDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVI 327
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+AC+ G Q+H+ K + +Y+ SA++DMY KCG ++ AR+ F+ +++ ++V
Sbjct: 328 NACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVV 387
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
W S+IT Y QNG L ++ +M + P+E+T+ASV+ AC+SLAA +G Q+HAR+
Sbjct: 388 LWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARI 447
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + ++ +G+AL MY KCG L++ +F RMP R+V+S +M+S
Sbjct: 448 IKY-GFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMIS----------- 495
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
G +QNG +AL LF + E + P TF NLL+AC+++
Sbjct: 496 --------------------GLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHM 535
Query: 399 ADLQLG 404
+ G
Sbjct: 536 GLVDRG 541
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 146/285 (51%), Gaps = 33/285 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
++++C +V + +++H+ K F ++++ + ++D+YAKCG L ARK F+ + +
Sbjct: 326 VINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD 385
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V W SIIT G+ Q+ + L + KM
Sbjct: 386 VVLWTSIIT-------------------------------GYVQNGDYEGGLNLYGKMQM 414
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E +E + S L AC+ G Q+HA + K + +V +GSAL MY KCG +
Sbjct: 415 ERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDD 474
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
+F M R+++SWN++I+ QNG + ALE+F +M+ GI+PD VT +++SAC+
Sbjct: 475 GYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSH 534
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNA-LVDMYAKCGKLNEAR 308
+ G + + ++M E +V A +VD+ ++ GKLNEA+
Sbjct: 535 MGLVDRGWE-YFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAK 578
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A +L +C ++ +++HARIIK F E+ I + L +Y KCG L +F +M +
Sbjct: 425 ASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPS 484
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFSEALGY 138
++V +WN++I+GL + G + A LF M + D ++ +++S + Y
Sbjct: 485 RDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEY 544
Query: 139 FVKMHSE 145
F M E
Sbjct: 545 FKMMFDE 551
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/650 (37%), Positives = 372/650 (57%), Gaps = 57/650 (8%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEI-FIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
++ C T R+ + ++ + E F++ + + L AR +FD+M ++
Sbjct: 1 MEHCHHQPHAKRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERD 60
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WN++++G + G++ +A +F MP ++ SWN M++ + Q+ R +A F
Sbjct: 61 VVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF----- 115
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+S+ ++ + ++ Y K R+
Sbjct: 116 ----------------------------------ESKADWELISWNCMMGGYVKRNRLVD 141
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +FD M ER+ VSWN++I+ Y QNG +A +F +E + V + A
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----------EESPVRDVFTWTAM 191
Query: 265 LAAF-KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
++ + + G+ AR + + V NA++ Y +C ++++AR +F+ MP +NV S
Sbjct: 192 VSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWN 251
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M++GYA+ + AR F +M +R+ +SW A+IAGY Q+G EEAL LF +KR+
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 311
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
TF + L+ CA +A L+LG+Q H VVK GL ES +VGN+L+ MY KCG+++
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL------ESGCYVGNALLVMYCKCGNID 365
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
D +FE + E++ VSWN MI G A++G+G EAL LF+ M G PD VTM+GVL ACS
Sbjct: 366 DAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACS 425
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GLV++G +YF SM++++G+ HYTCM+DLLGRAG LD+A+ L++ MP +PDA W
Sbjct: 426 HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATW 485
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL A ++H N LGE AK + E+EP NSG YVLLSN+YA GRWG+V R+R MR R
Sbjct: 486 GALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDR 545
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
GV K PG SW+E+ ++ F V D HP IY L+ L +MK+ GYV
Sbjct: 546 GVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYV 595
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 235/502 (46%), Gaps = 64/502 (12%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+ K+I ++ +S + +L + +++ + D RR + +S+ E+ N ++ Y
Sbjct: 78 KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARR----LFESKADWELISWNCMMGGY 133
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
K L AR +FD+M ++ +WN++I+G + G + +A RLF P RD +W +MVS
Sbjct: 134 VKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVS 193
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G+ Q+ EA F M +N S + AG V K Q L ++
Sbjct: 194 GYVQNGMLDEARRVFDGMPEKNSV-------SWNAIIAGYVQCKRMDQARELF-EAMPCQ 245
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+V + +I Y + G ++ AR FD M +R+ +SW ++I Y Q+G +AL +FV M
Sbjct: 246 NVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 305
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G + T S +S CA +AA + G Q+H R+++ L + +GNAL+ MY KCG +
Sbjct: 306 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA-GLESGCYVGNALLVMYCKCGNI 364
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
++A VF+ + + VVS +M++GYA+ +G
Sbjct: 365 DDAYIVFEGIEEKEVVSWNTMIAGYAR-------------------------------HG 393
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EAL LF +K+ + P T +L+AC +HT +V G +
Sbjct: 394 FGKEALMLFESMKKTGILPDDVTMVGVLSAC-----------SHTGLVDKGTEYFYSMTQ 442
Query: 425 DI-FVGNS-----LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEAL 477
D NS +ID+ + G ++D + + M E D +W A++ A +G L
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL--GASRIHGNTEL 500
Query: 478 GLFKKMLLCGEKPDHVTMIGVL 499
G ++ +PD+ M +L
Sbjct: 501 GEKAAKMIFEMEPDNSGMYVLL 522
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/632 (37%), Positives = 358/632 (56%), Gaps = 44/632 (6%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA ++K+ + ++ N L+ Y L A K+ M +V ++N+I++G K+G
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ +A +LF +RD SWN ++SG ++ + E L +F+KM + +++ +
Sbjct: 97 VSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPC 156
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C D G QVHA + K D ++G+ L+ MY + G + AR+VFDGM R +V+W
Sbjct: 157 C----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTW 212
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N++I+CY + G ++ +F ++ GI DE T A V++ A+ E +Q+H+ ++
Sbjct: 213 NAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIE 272
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+D NALV++Y+KCG V SA
Sbjct: 273 -RGFCSDRFTNNALVNLYSKCGY-------------------------------VASASR 300
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F ++ +++VVSW +I G+ Q+G EEA+ LF ++ + P +TFG LL ACA+
Sbjct: 301 LFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANA 360
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
Q GR H V+K GL +D+ VG++++DMY KCG + D R F+ M ERD SW
Sbjct: 361 FQKGRHFHGLVLKFGLL-----GADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASW 415
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHAGLVEEGRKYFSS 517
N +I G AQNG G +AL L+ +M+L G P+ VT +GVLCACSH GL++EG YF
Sbjct: 416 NGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKE 475
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
M +H + P +HYTCMVDLLGRAG L EA+ LI A+P++PD V+WG+LL ACK+H ++
Sbjct: 476 MVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQ 535
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
+ A+ L EP NS YVLL+N Y ++G WGE V +R++M RGV K GCSW+EI
Sbjct: 536 MTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIG 595
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
++ F+ D HP + VL L +M+
Sbjct: 596 TCMHSFLAGDXLHPQIEVASQVLPRLYLQMRE 627
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 82/478 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +A ++ C + ++VHA I+K + FI L+ +YA+ G + ARKVF
Sbjct: 146 DNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M ++ + TWN +M+S ++++ R +++G
Sbjct: 202 DGMPSRGLVTWN-------------------------------AMISCYSKYGRGDKSIG 230
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F ++ E + EY++ L+ A QVH+L+ + + SD + +AL+++Y
Sbjct: 231 LFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYS 290
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V+ A R+F+ + ++++VSW +I + Q+G +A+ +F +M IEP+ T
Sbjct: 291 KCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGG 350
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ ACA AF++G H +++ L D+V+G+A+VDMY+KCG++ +A F MP R
Sbjct: 351 LLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPER 410
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKM-------LERNVVSWNALIAGYTQNGENEEAL 370
++ S ++ GYA+ + A ++ +M + N V++ ++ + NG +E
Sbjct: 411 DIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGY 470
Query: 371 GLFR-LLKRESVCPT--HYT------------------------------FGNLLNACAN 397
F+ ++ + + PT HYT +G LL AC
Sbjct: 471 SYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKL 530
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
D+Q+ R+ H+ + R + + + NS D+ G + I E M R
Sbjct: 531 HGDVQMTRRTAEHLYTNEPR---NSSNYVLLANSYTDI----GEWGEAVEIREVMEAR 581
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 176/373 (47%), Gaps = 41/373 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +A +L+ V + +VH+ II+ F S+ F N L+++Y+KCG + A ++F
Sbjct: 243 DEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLF 302
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ +++V +W II G L+ G ++ EA+
Sbjct: 303 EEIPDQDVVSWTVIIVGFLQSGHME-------------------------------EAMW 331
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMY 196
F +M + + ++FG L ACA + F+ G H L+ K +DV +GSA++DMY
Sbjct: 332 LFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMY 391
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM---ASGIEPDEV 253
KCG + A R F M ER+I SWN +I Y QNG AL+++ M+ SGI P+EV
Sbjct: 392 SKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEV 451
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T V+ AC+ KEG ++ ++ +VD+ + G L EA +
Sbjct: 452 TFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILA 511
Query: 314 MPIRNVVSETSMVSGYAKAS-----SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+PI+ + G K + ++A ++T RN ++ L YT GE E
Sbjct: 512 LPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNE-PRNSSNYVLLANSYTDIGEWGE 570
Query: 369 ALGLFRLLKRESV 381
A+ + +++ V
Sbjct: 571 AVEIREVMEARGV 583
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/672 (36%), Positives = 371/672 (55%), Gaps = 72/672 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C + +++H+ ++K+ + + + L+D+Y KCG + A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ NV WN + L+ +G I D ++ F
Sbjct: 304 NLGDRTNVVLWNLM---LVAYGQISDLAKSFE---------------------------- 332
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++++ L C + ++G Q+H+L K+ + SD+Y+ LIDMY
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K + AR++ + + +R++VSW S+I Y Q+ +AL F M G+ PD + LAS
Sbjct: 393 KYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLAS 452
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
SACA + A ++GLQIHAR+ D+ + N LV++YA+CG+ EA +F +
Sbjct: 453 AASACAGIKAMRQGLQIHARVY-VSGYAADISIWNTLVNLYARCGRSEEAFSLFREID-- 509
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ ++WN LI+G+ Q+ E+AL +F +
Sbjct: 510 -----------------------------HKDEITWNGLISGFGQSRLYEQALMVFMKMS 540
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ +TF + ++A ANLAD++ G+Q H VK +G S+ V N+LI +Y
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK------TGHTSETEVANALISLYG 594
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ED IF M R+ VSWN +I C+Q+G G EAL LF +M G KP+ VT IG
Sbjct: 595 KCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIG 654
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLVEEG YF SMS +GL P+ DHY C+VD+LGRAG LD A+ ++ MP+
Sbjct: 655 VLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPIT 714
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A+IW +LL+ACKVH+NI +GE AK LLE+EP +S YVLLSN YA G+W +VR
Sbjct: 715 ANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVR 774
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV---P 674
K+M+ RG+ K+PG SWIE+ V+ F V D+ HPL+ +IY L L + ++GY P
Sbjct: 775 KMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENP 834
Query: 675 NASDDEAYEEQN 686
N ++ E+++
Sbjct: 835 NLFHEKEQEQKD 846
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 251/534 (47%), Gaps = 81/534 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA + ++ I N LID+YAK G ++ AR+VF ++S+
Sbjct: 65 IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS------------------ 106
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
RD SW +M+SG+AQ EA + +MH + Y S LSA
Sbjct: 107 -------------RDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C F G +HA + K + S+ ++G+ALI +Y G A RVF M + V++
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI+ + Q G AL++F M SG+ PD VT+AS+++ACAS+ ++G Q+H+ L++
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK 273
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ D + +L+D+Y KCG +++A
Sbjct: 274 A-GMSFDYITEGSLLDLYVKCG-------------------------------DIETAHD 301
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F NVV WN ++ Y Q + ++ +F ++ + P +T+ +L C
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQ 361
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++LG Q H+ +K+G ESD++V LIDMY K ++ +I E + +RD VSW
Sbjct: 362 IELGEQIHSLSIKNGF------ESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSW 415
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-----HAGLVEEGRKYF 515
+MI G Q+ + EAL FK+M CG PD++ + AC+ GL R Y
Sbjct: 416 TSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYV 475
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S + + + + +V+L R G +EA +L + D + W L++
Sbjct: 476 SGYAADISI------WNTLVNLYARCGRSEEAFSLFREID-HKDEITWNGLISG 522
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 84/208 (40%), Gaps = 33/208 (15%)
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
H + G +D +GN LID+Y K G V ++F+ + RD VSW AM+ G AQ G G
Sbjct: 66 HATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLG 125
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH----------- 522
EA L+ +M P + VL AC+ L +GR + + K+
Sbjct: 126 KEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNAL 185
Query: 523 -----GLAPLKDHYTCMVDLL-----------------GRAGCLDEAKTLIEAMPMQPDA 560
G K D+L G C + ++ ++PD
Sbjct: 186 IALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDC 245
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLE 588
V SLLAAC ++ G+ + LL+
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLK 273
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/607 (38%), Positives = 366/607 (60%), Gaps = 20/607 (3%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V ++I+ + G +D A F +MPER++ SW +M++ FAQ R +A+ + ++
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP 454
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ A +A+ V Q L+ + +V +A+I Y + G +
Sbjct: 455 EQTVATK-----TAMMTAYAQVG---RIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLK 506
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ +F M +N SW ++I + QN + +ALE+ + + SG P + + S +SACA
Sbjct: 507 EAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACA 566
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
++ + G IH+ ++ N V+ N L+ MYAKCG + + VF + +++ VS
Sbjct: 567 NIGDVEIGRVIHSLAIKTGCQFNSYVM-NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWN 625
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++SG ++ + AR++F KM +R+VVSW A+I+ Y Q G E AL LF + + P
Sbjct: 626 SLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKP 685
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL+AC NL ++LG Q H + K G ++ +FVGNSLI MY KCG E
Sbjct: 686 NQLTVTSLLSACGNLGAIKLGEQFHALIFKLGF------DTFLFVGNSLITMYFKCG-YE 738
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
DG +FE M E D ++WNA++VGCAQNG G EA+ +F++M + G PD ++ +GVLCACS
Sbjct: 739 DGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACS 798
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV+EG +F+SM++++G+ PL HYTCMVDLLGRAG L EA+ LIE MP++PD+VIW
Sbjct: 799 HAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIW 858
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
+LL AC++HRN+ LG+ VA++L ++ S YVLLSN++A G W +V +RKLM+ +
Sbjct: 859 EALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQ 918
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS----DD 679
G+ K+PG SWI++ ++ F+ D+ H +EIY LK + GY+P+ + D
Sbjct: 919 GLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDV 978
Query: 680 EAYEEQN 686
E ++QN
Sbjct: 979 EEEQKQN 985
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 168/545 (30%), Positives = 267/545 (48%), Gaps = 82/545 (15%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y + G L ARK+FD+M KNV +WNS++TG + +A LF MPER+
Sbjct: 268 NAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSV 327
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW M+SG+ + EA FVKM + F LSA G D ++ + +
Sbjct: 328 SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIA 387
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
K+ Y DV +GSA+++ Y + G + A F+ M ERN SW ++I + Q G DA+
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH-ARLMRCEKLRNDLVLGNALVD 296
+++ R+ P++ +V + A + A+ + +I ARL+ E L ++V NA++
Sbjct: 448 QLYERV------PEQ----TVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIA 497
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + G L EA+ +F +MP++N S W A+
Sbjct: 498 GYTQNGMLKEAKDLFQKMPVKNSAS-------------------------------WAAM 526
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IAG+ QN E+ EAL L L R P+ +F + L+ACAN+ D+++GR H+ +K G
Sbjct: 527 IAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGC 586
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN------ 470
+F S +V N LI MY KCG+VEDG +F T+ +D VSWN++I G ++N
Sbjct: 587 QFNS------YVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDA 640
Query: 471 -------------------------GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
G+G AL LF ML G KP+ +T+ +L AC +
Sbjct: 641 RVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G ++ G ++ + + K G ++ + + G ++ + E MP + D + W +
Sbjct: 701 GAIKLGEQFHALIFK-LGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNA 757
Query: 566 LLAAC 570
+L C
Sbjct: 758 VLVGC 762
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 233/466 (50%), Gaps = 76/466 (16%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+ D +++ R+ + A+ + ++ YA+ G + AR +FD++ N NV WN+II G
Sbjct: 443 LDDAIQLYERVPEQTVAT----KTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG 498
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+ G + +A LF MP ++ SW +M++GF Q++ EAL +++H S+ SF
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS----------- 203
SALSACA D ++G +H+L K+ + Y+ + LI MY KCG V
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 204 --------------------CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
AR VF+ M +R++VSW ++I+ Y Q G AL++F+ M
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+A GI+P+++T+ S++SAC +L A K G Q HA + + L +GN+L+ MY KCG
Sbjct: 679 LARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL-GFDTFLFVGNSLITMYFKCG- 736
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ CVF+ MP E ++++WNA++ G QN
Sbjct: 737 YEDGFCVFEEMP-------------------------------EHDLITWNAVLVGCAQN 765
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG-RQAHTHVVKHGLRFLSGE 422
G +EA+ +F ++ E + P +F +L AC++ + G ++ K+G+ L
Sbjct: 766 GLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPL--- 822
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++ ++D+ + G + + + E M V+ D V W A++ C
Sbjct: 823 ---VYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 865
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 29/394 (7%)
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+K + ++ + I G+ GRV ARRVF+ M +R++VSWNS+I Y QNG +A
Sbjct: 163 NKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 222
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F + I + L KEG AR + ++V NA++
Sbjct: 223 LLFDAFVGKNIRTWTILLTGYA---------KEGRIEEAREVFESMTERNVVSWNAMISG 273
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y + G L AR +FD MP +NV S S+V+GY + AR +F +M ERN VSW +I
Sbjct: 274 YVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMI 333
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+GY + EA +F + R P F +L+A L DL+L +K
Sbjct: 334 SGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIK---- 389
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+G E D+ VG+++++ Y + GS++ FETM ER+ SW MI AQ G +A+
Sbjct: 390 --TGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 478 GLFKKMLLCGEKPDHV--TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
L++++ P+ T ++ A + G +++ R F + L P + ++
Sbjct: 448 QLYERV------PEQTVATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAII 496
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ G L EAK L + MP++ A W +++A
Sbjct: 497 AGYTQNGMLKEAKDLFQKMPVKNSAS-WAAMIAG 529
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 9/302 (2%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKS--QFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S F L +C V R +H+ IK+ QF S ++ N LI +YAKCG + VF
Sbjct: 556 SSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNS--YVMNGLISMYAKCGNVEDGSHVF 613
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K+ +WNS+I+GL + +DDA +F MP+RD SW +++S + Q AL
Sbjct: 614 RTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALD 673
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F+ M + ++ + S LSAC K+G Q HAL+ K + + +++G++LI MY
Sbjct: 674 LFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYF 733
Query: 198 KCGRVS--CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
KCG C VF+ M E ++++WN+++ QNG +A+++F +M GI PD+++
Sbjct: 734 KCGYEDGFC---VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSF 790
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+ AC+ EG + + + + +VD+ + G L+EA + + MP
Sbjct: 791 LGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMP 850
Query: 316 IR 317
++
Sbjct: 851 VK 852
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 406 QAHTHVVKH--GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
Q V++H G + ++ +F N+ I + G VE+ R+F M++RD VSWN+M
Sbjct: 149 QQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSM 208
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G +QNG EA LF + G+ T++ L + G +EE R+ F SM++ +
Sbjct: 209 INGYSQNGKVDEARLLFDAFV--GKNIRTWTIL--LTGYAKEGRIEEAREVFESMTERNV 264
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYV 582
++ + M+ + G L A+ L + MP + + W S++ C +R + E
Sbjct: 265 VS-----WNAMISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHCYR---MSE-- 313
Query: 583 AKKLLEIEPS-NSGPYVLLSNMYAELGRWGE 612
A++L + P NS ++++ + Y + + E
Sbjct: 314 ARELFDQMPERNSVSWMVMISGYVHISDYWE 344
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/706 (34%), Positives = 382/706 (54%), Gaps = 108/706 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + + +++H ++K F+SE ++ N L+ +Y++ G L A ++F MS ++
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 85 VFTWNSIITGLLKWGFIDDASRLF-------------------------ASMPERDQCSW 119
++NS+I+GL + G+I+ A LF ++P Q
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS 376
Query: 120 NSMVSG------------------------------FAQHDRFSEALGYFVKMHSENFAL 149
++ +G + Q D +++ F +M E
Sbjct: 377 YAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVP 436
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
+++++ S L C +G Q+H + K+ + +VY+ S LIDMY K G++ A ++F
Sbjct: 437 NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
++E ++VSW ++I Y Q+ ++AL +F M GI+ D + AS +SACA + A
Sbjct: 497 RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 556
Query: 270 EGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+G QIHA+ C +DL +GNALV +YA+CGK
Sbjct: 557 QGRQIHAQ--SCLSGYSDDLSIGNALVSLYARCGK------------------------- 589
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
V+ A F ++ ++ VSWN+L++G+ Q+G EEAL +F + + + +TF
Sbjct: 590 ------VREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTF 643
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
G+ ++A AN+A++++G+Q H + K +G +S+ V N+LI +Y KCG+++D
Sbjct: 644 GSAVSAAANIANVRIGKQIHGMIRK------TGYDSETEVSNALITLYAKCGTIDD---- 693
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
+SWN+MI G +Q+G G EAL LF+ M P+HVT +GVL ACSH GLV
Sbjct: 694 ---------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLV 744
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+EG YF SMS+ H L P +HY C+VDLLGR+G L AK +E MP+QPDA++W +LL+
Sbjct: 745 DEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLS 804
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC VH+NI +GE+ A LLE+EP +S YVL+SNMYA G+W R R++M+ RGV K+
Sbjct: 805 ACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKE 864
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
PG SW+E+ V+ F D+ HP IY L+ L GYVP
Sbjct: 865 PGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVP 910
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/631 (27%), Positives = 289/631 (45%), Gaps = 130/631 (20%)
Query: 17 LDSSPFAKLLDSCL-RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D FA +L C + S ++HA+ I S F S FI N LID+Y
Sbjct: 161 FDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLY----------- 209
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
K GF+ A ++F ++ RD SW +M+SG +Q+ EA
Sbjct: 210 --------------------FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEA 249
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F ++ LSAC F+ G Q+H L+ K +SS+ Y+ +AL+ +
Sbjct: 250 MLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTL 295
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + G +S A ++F M +R+ VS+NSLI+ Q G + AL +F +M +PD VT+
Sbjct: 296 YSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTV 355
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG------------- 302
AS++SACAS+ A G Q H+ ++ + +D+V+ +L+D+Y KC
Sbjct: 356 ASLLSACASVGALPNGKQFHSYAIKA-GMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYG 414
Query: 303 ---KLNEARCVFDRMPIR---------------------------------------NVV 320
LN++ +F +M I NV
Sbjct: 415 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVY 474
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ ++ YAK + A +F ++ E +VVSW A+IAGYTQ+ + EAL LF+ ++ +
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG 534
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ + F + ++ACA + L GRQ H LSG D+ +GN+L+ +Y +CG
Sbjct: 535 IKSDNIGFASAISACAGIQALDQGRQIHAQSC------LSGYSDDLSIGNALVSLYARCG 588
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
V + F+ + +D VSWN+++ G AQ+GY EAL +F +M G + + T +
Sbjct: 589 KVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVS 648
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD--------------- 545
A ++ V G++ M ++ G + ++ L + G +D
Sbjct: 649 AAANIANVRIGKQ-IHGMIRKTGYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQHG 707
Query: 546 ---EAKTLIEAMP---MQPDAVIWGSLLAAC 570
EA L E M + P+ V + +L+AC
Sbjct: 708 CGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 228/507 (44%), Gaps = 80/507 (15%)
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
GCL +R +D + +I L +G ++ A +F MP R WN + + F
Sbjct: 90 GCL-NSRSFYDGLK---------LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFI 139
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDV 186
G F +M ++N E F L C+G +V F+ Q+HA S + S
Sbjct: 140 AERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESST 199
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ + LID+Y K G +S A++VF+ ++ R+ VSW ++I+ QNG +A+ +F ++
Sbjct: 200 FICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--- 256
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
V+SAC + F+ G Q+H +++ + ++ + NALV +Y++ G L+
Sbjct: 257 -----------VLSACTKVEFFEFGKQLHGLVLK-QGFSSETYVCNALVTLYSRSGNLSS 304
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A +F M R+ VS S++SG A Q G
Sbjct: 305 AEQIFHCMSQRDRVSYNSLISGLA-------------------------------QQGYI 333
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
AL LF+ + + P T +LL+ACA++ L G+Q H++ +K G+ SDI
Sbjct: 334 NRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGM------TSDI 387
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V SL+D+Y+KC ++ F + D ++ ++ +F +M +
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQMQIE 432
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G P+ T +L C+ G + G + + + K G + ++D+ + G LD
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDH 491
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
A + + + D V W +++A H
Sbjct: 492 ALKIFRRLK-ENDVVSWTAMIAGYTQH 517
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 219/484 (45%), Gaps = 79/484 (16%)
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
LL S Y G LID Y G ++CA VFD M R++ WN + +
Sbjct: 87 LLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGR 146
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLA-AFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+F RM+ +E DE A V+ C+ A +F+ QIHA+ + + + N L
Sbjct: 147 VPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTI-TSGFESSTFICNPL 205
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+D+Y K G L+ A+ VF+ + R+ VS +M+S
Sbjct: 206 IDLYFKNGFLSSAKKVFENLKARDSVSWVAMIS--------------------------- 238
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
G +QNG EEA+ LF C +L+AC + + G+Q H V+K
Sbjct: 239 ----GLSQNGYEEEAMLLF--------CQI------VLSACTKVEFFEFGKQLHGLVLKQ 280
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G S+ +V N+L+ +Y + G++ +IF M +RD VS+N++I G AQ GY
Sbjct: 281 GF------SSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL-------APL 527
AL LFKKM L +KPD VT+ +L AC+ G + G++ F S + + G+ L
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSL 393
Query: 528 KDHYTCMVDL---------LGRAGCLDEAKTLIEAMPMQ---PDAVIWGSLLAACKVHRN 575
D Y D+ G+ L+++ + M ++ P+ + S+L C
Sbjct: 394 LDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453
Query: 576 IMLGEYVAKKLLEIE-PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
LGE + ++L+ N +L +MYA+ G+ +++ + +++ VV SW
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVV-----SWT 508
Query: 635 EILG 638
++
Sbjct: 509 AMIA 512
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 58/217 (26%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++S F + + +V +++H I K+ + SE + N LI +YAKCG +
Sbjct: 638 INSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI------ 691
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D +S WNS+IT G++QH EAL
Sbjct: 692 -DDIS------WNSMIT-------------------------------GYSQHGCGFEAL 713
Query: 137 GYFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMG 189
F M + + +F LSAC+ G VD F+ ++ H L+ K +
Sbjct: 714 KLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHY------ 767
Query: 190 SALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+ ++D+ G+ G +S A+R + M + + + W +L++
Sbjct: 768 ACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLS 804
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/656 (36%), Positives = 378/656 (57%), Gaps = 39/656 (5%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
+I+K S++ + N +I Y + G L AR +FD+M +N +W+++I+GL+K+G +++
Sbjct: 77 QIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEE 136
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ F P ++ SW + +SGF ++ EAL F ++ ++ +F S + AC
Sbjct: 137 SMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGE 196
Query: 164 SVDFKMGTQVHALLSKSRYSS-------------------------------DVYMGSAL 192
DF +G + L+ K+ + DV +A+
Sbjct: 197 LGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAI 256
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D Y + G + ARR+FD M ERN +SW+++I Y Q+G A +AL++F +M+ G +P+
Sbjct: 257 LDAYVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNI 316
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
A +SA ASL A G+ IH + + + D+ +G++L+D+Y KCGK ++ R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKI-GIDKDVFIGSSLIDLYCKCGKPDDGRLVFD 375
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ +NVV SMV GY+ ++ +F + E+N SW +JAGY +N + E+ L +
Sbjct: 376 LILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEV 435
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L P TF ++L ACA++A L G H ++K G+++ DIFVG +L
Sbjct: 436 FNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQY------DIFVGTAL 489
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPD 491
DMY KCG + ++FE M E++ +SW MI G A++G+ E+L LF++M E P+
Sbjct: 490 TDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPN 549
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ ++ VL ACSH GLV++G YF+SM K +G+ P HYTC+VDLL R+G L EA+ I
Sbjct: 550 ELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFI 609
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
+P QP+A W +LL+ CK +++ + E AKKL ++ +NS YVLLSN+YA GRW
Sbjct: 610 RTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWI 669
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+V +RKLMR++G+ K GCSW+E+ V+ F +D H + EIY L++L EM
Sbjct: 670 DVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQSDEIYGTLQLLRSEM 725
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 235/493 (47%), Gaps = 106/493 (21%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKC------------------------------ 199
G +HA L K+ +SS Y+ L+ +Y C
Sbjct: 40 GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
Query: 200 -GRVSCARRVFDGMRER-------------------------------NIVSWNSLITCY 227
G + AR +FD M ER N+VSW + I+ +
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGF 159
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+NG +AL++F R++ SG+ P++VT SVV AC L F G+ I +++ +
Sbjct: 160 VRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKA-GFEHY 218
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
L + N+L+ + + G+++ AR VFDRM R+VVS T+++ Y + ++ AR +F +M E
Sbjct: 219 LSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDEMPE 278
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
RN +SW+A+IA Y+Q+G EEAL LF + +E P F L+A A+L L G
Sbjct: 279 RNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINI 338
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H HV K G+ + D+F+G+SLID+Y KCG +DG +F+ ++E++ V WN+M+ G
Sbjct: 339 HGHVTKIGI------DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGY 392
Query: 468 AQNG-------------------YGT------------EALGLFKKMLLCGEKPDHVTMI 496
+ NG +GT + L +F +L+ G+ P+ T
Sbjct: 393 SINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFS 452
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAM 554
VLCAC+ +++G + K L D + T + D+ + G + +K + E M
Sbjct: 453 SVLCACASIASLDKGMNVHGKIIK---LGIQYDIFVGTALTDMYAKCGDIGSSKQVFERM 509
Query: 555 PMQPDAVIWGSLL 567
P + + + W ++
Sbjct: 510 P-EKNEISWTVMI 521
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S FA L + +++S +H + K ++FI + LID+Y KCG R VFD
Sbjct: 317 SCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDL 376
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ KNV WNS++ G G +++ LF +PE++ SW ++++G+ ++++ + L F
Sbjct: 377 ILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVF 436
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ ++ +F S L ACA G VH + K D+++G+AL DMY KC
Sbjct: 437 NTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKC 496
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASV 258
G + +++VF+ M E+N +SW +I ++G A ++L +F M S + P+E+ L SV
Sbjct: 497 GDIGSSKQVFERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSV 556
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ AC+ +GL + + ++ +VD+ ++ G+L EA +P +
Sbjct: 557 LFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQ 615
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F+ +L +C S+ VH +IIK +IF+ L D+YAKCG + +++VF
Sbjct: 447 NKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
++M KN +W +I GL + GF ++ LF M + + N ++
Sbjct: 507 ERMPEKNEISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELM 552
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 372/658 (56%), Gaps = 69/658 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S +A + SC + ++H +K+ F S++ + +D+YAKC
Sbjct: 256 VSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC--------- 306
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D MS DA +LF+ +P+ + S+N+M+ G+A++++ +A
Sbjct: 307 -DNMS---------------------DAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAF 344
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+++ +F+ E S ALSA A G Q+H L KS SS++ + +A++DMY
Sbjct: 345 KLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMY 404
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A +FD M R+ VSWN++IT EQN L F M+ S +EPDE T
Sbjct: 405 GKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYG 464
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ ACA AF G+++H R+++ + + +G+ALVDMY+KCG + EA + R+
Sbjct: 465 SVLKACAGQRAFSNGMEVHGRIIK-SGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLE- 522
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
E+ +VSWNA+I+G++ ++E++ F +
Sbjct: 523 ------------------------------EQTMVSWNAIISGFSLQKKSEDSQRFFSHM 552
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
V P ++T+ +L+ CANLA + LG+Q H ++K L LS D+++ ++L+DMY
Sbjct: 553 LEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK--LELLS----DVYITSTLVDMY 606
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG++ D +F +RD V+WNAMI G A +G G EAL LF+ ML KP+H T +
Sbjct: 607 SKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFV 666
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL ACSH G ++G YF M+ + L P +HY+CMVD+LGR+G ++EA LI+ MP
Sbjct: 667 SVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPF 726
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ DA+IW +LL+ CK+ N+ + E A LL+++P +S Y LLSN+YA+ G W +V ++
Sbjct: 727 EADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKI 786
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R+ MR + K+PGCSWIE+ V+ F+V DK HP + IY +L +L +M+R G P
Sbjct: 787 RQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAP 844
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/625 (27%), Positives = 292/625 (46%), Gaps = 84/625 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + C +++ + HA +I S F +F+ N LI +Y KC L A KVF++M
Sbjct: 27 FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER-DQCSWNSMVSGFAQHDRFSEALGYFV 140
+++ +WN+++ G G ++ A +F SMP D SWNS++SG+ Q+ +++ F+
Sbjct: 87 QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM + +L C+ D +G Q+H + + + DV GSAL+DMY KC
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN 206
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ + VF + ++N +SW++ I QN L++F M GI + T ASV
Sbjct: 207 SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFR 266
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+CA L+A + G Q+H ++ + +D+++G A +DMYAKC +++A +F +P N+
Sbjct: 267 SCAGLSASRLGTQLHCHALKTD-FGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 321 SETSMVSGYAKASSVKSARLMFTKM----------------------------------- 345
S +M+ GYA+ A +F ++
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385
Query: 346 ----LERNVVSWNALIAGYTQNGENEEALGLFRLLK------------------------ 377
L N+ NA++ Y + G EA GLF ++
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 378 -------RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
R + P +T+G++L ACA G + H ++K G+ +FVG+
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGL------KMFVGS 499
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+DMY KCG +E+ +I + E+ VSWNA+I G + ++ F ML G +P
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEP 559
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAK 548
D+ T VL C++ V G++ + M K L L D Y + +VD+ + G + ++
Sbjct: 560 DNFTYATVLDTCANLATVGLGKQIHAQMIK---LELLSDVYITSTLVDMYSKCGNMHDSL 616
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVH 573
+ P + D+V W +++ H
Sbjct: 617 LMFRKAP-KRDSVTWNAMICGFAYH 640
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 214/458 (46%), Gaps = 86/458 (18%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F C+ K G + HA + S ++ V++ + LI MY KC + A +VF+ M
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 213 RERNIVS--------------------------------WNSLITCYEQNGPASDALEVF 240
+R+IVS WNSLI+ Y QNG ++ VF
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
++M G+ D TLA + C+ L G+QIH ++ D+V G+ALVDMYAK
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQM-GFDYDVVTGSALVDMYAK 204
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C L ++ VF +P ++N +SW+A IAG
Sbjct: 205 CNSLEDSLDVFSELP-------------------------------DKNWISWSAAIAGC 233
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
QN + L LF+ ++R+ + + T+ ++ +CA L+ +LG Q H H +K
Sbjct: 234 VQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFG--- 290
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
SD+ VG + +DMY KC ++ D ++F + + + S+NAMI+G A+N G +A LF
Sbjct: 291 ---SDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLF 347
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT-------C 533
++ D V++ G L A + EG + HGLA +K + +
Sbjct: 348 LQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL-------HGLA-IKSNLSSNICVANA 399
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++D+ G+ G L EA L + M ++ D V W +++ AC+
Sbjct: 400 ILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACE 436
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/690 (35%), Positives = 377/690 (54%), Gaps = 100/690 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+S +A L C++ S + +H I+K + GCL
Sbjct: 36 FNSHAYANALQDCIQKDEPSRGKGLHCEILK------------------RGGCL------ 71
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
++F WN ++ +K F+ DAS+LF MPER+ S+ +++ G+A+ RF EA+
Sbjct: 72 -------DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV++H E L+ + F + L + ++G +HA + K + S+ ++G+ALID Y
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAY 184
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
CGRV AR VFDG+ +++VSW ++TC+ +N +AL++F +M G +P+ T A
Sbjct: 185 SVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFA 244
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV AC L AF G +H ++ + DL +G AL+D+Y K G +++AR F+ +P
Sbjct: 245 SVFKACLGLEAFDVGKSVHGCALK-SRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPK 303
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++V+ + M++ YA Q+ +++EA+ +F +
Sbjct: 304 KDVIPWSFMIARYA-------------------------------QSDQSKEAVEMFFQM 332
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++ V P +TF ++L ACA + L LG Q H HV+K GL SD+FV N+L+D+Y
Sbjct: 333 RQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH------SDVFVSNALMDVY 386
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML------------ 484
KCG +E+ +F R+ V+WN +IVG Q G G +AL LF ML
Sbjct: 387 AKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYS 446
Query: 485 ----LCGE---------------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
C KPD +T +GVL AC++AGL+++G+ YF+SM ++HG+
Sbjct: 447 SALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIE 506
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HYTCMV LLGR G LD+A LI+ +P QP ++W +LL AC +H +I LG A++
Sbjct: 507 PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQR 566
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+LE+EP + +VLLSNMYA RW V VRK M+++GV K+PG SWIE G V+ F V
Sbjct: 567 VLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTV 626
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
D HP + I +L+ L + K+ GY+PN
Sbjct: 627 GDTSHPEVRVINGMLEWLHMKTKKAGYIPN 656
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 361/617 (58%), Gaps = 25/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y + AR +FD+M +++F+WN ++TG ++ + DA RLF MPE+D
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS++SG+AQ+ EA F M +N S+ L+A + + LL
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEA----CLL 195
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+S+ D+ + L+ + + ++ AR +FD M R+ +SWN++I+ Y Q G S A
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQAR 255
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F DE V + A ++ + + G+ A+ E + V NA++
Sbjct: 256 RLF----------DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIA 305
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + K++ AR +F+ MP RN+ S +M++GY + + AR F M +R+ VSW A+
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IAGY Q+G EEAL +F +K++ TFG L+ CA++A L+LG+Q H VK G
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+ FVGN+L+ MY KCGS+++ FE + E+D VSWN M+ G A++G+G +A
Sbjct: 426 ------GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L +F+ M G KPD +TM+GVL ACSH GL++ G +YF SM+K++G+ P HYTCM+D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAG L+EA+ LI MP QP A WG+LL A ++H N LGE A+ + ++EP NSG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW + ++R MR GV K PG SW+E+ ++ F V D HP + I
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L +M+ GYV
Sbjct: 660 YAYLEELDLKMREEGYV 676
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 152/305 (49%), Gaps = 31/305 (10%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
R+ ++F ++ Y + G L A+ FD+M KN ++N++I G ++ +D
Sbjct: 256 RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDI 315
Query: 104 ASRLFASMPERDQCSWNSMVS-------------------------------GFAQHDRF 132
A LF SMP R+ SWN+M++ G+AQ +
Sbjct: 316 ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL FV++ + +L+ +FG ALS CA ++G Q+H K Y + ++G+AL
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MY KCG + A F+G+ E+++VSWN+++ Y ++G AL VF M +G++PDE
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T+ V+SAC+ G + + + + ++D+ + G+L EA+ +
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 313 RMPIR 317
MP +
Sbjct: 556 NMPFQ 560
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 60/441 (13%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
+ +S+ ++ N L+ + + L AR +FDKM ++ +WN++I+G + G + A
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA 254
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
RLF P RD +W +MVSG+ Q+ EA +F +M +N E S+ + + AG
Sbjct: 255 RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMI---AGY 307
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
V K + L +S ++ + +I YG+ G ++ AR+ FD M +R+ VSW ++I
Sbjct: 308 VQTKK-MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G +AL +FV + G + T +S CA +AA + G QIH + ++
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM-GY 425
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+GNAL+ MY KCG ++EA F+ + ++VVS +M++GYA+
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR------------- 472
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+G +AL +F +K V P T +L+AC
Sbjct: 473 ------------------HGFGRQALTVFESMKTAGVKPDEITMVGVLSAC--------- 505
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDW 457
+HT ++ G + D V + +ID+ + G +E+ + M +
Sbjct: 506 --SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGA 563
Query: 458 VSWNAMIVGCAQNGYGTEALG 478
SW A++ A +G LG
Sbjct: 564 ASWGALL--GASRIHGNTELG 582
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 184/418 (44%), Gaps = 88/418 (21%)
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+++ +I+ WN I+ + +NG AL VF M
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMP--------------------------- 76
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
R V NA++ Y + K N AR +FD+MP R++ S M++GY +
Sbjct: 77 -------------RRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVR 123
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGN 390
+ AR +F M E++VVSWN+L++GY QNG +EA +F + ++ S+ ++
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSI-----SWNG 178
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL A + GR + + L F S + D+ N L+ +++ + D +F+
Sbjct: 179 LLAAY-----VHNGR-----IEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP--DHVTMIGVLCACSHAGLV 508
M RD +SWN MI G AQ G ++A LF E P D T ++ G++
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFD------ESPTRDVFTWTAMVSGYVQNGML 282
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+E + +F M +++ ++ Y M+ + +D A+ L E+MP + + W +++
Sbjct: 283 DEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMIT 336
Query: 569 ACKVHRNIMLGEYVAKKLLEIEP--------------SNSGPYVLLSNMYAELGRWGE 612
+I A+K ++ P + SG Y NM+ E+ + GE
Sbjct: 337 GYGQIGDIAQ----ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D++ N + + + G + A VF+ MP R+ VS +M+SGY + S AR +F +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ER++ SWN ++ GY +N +A LF L+ + V ++ +LL+ A + R+
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV----SWNSLLSGYAQNGYVDEARE 163
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
F + E + N L+ Y+ G +E+ C +FE+ + D +SWN ++ G
Sbjct: 164 V----------FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+ +A LF KM + D ++ ++ + G + + R+ F +P
Sbjct: 214 FVRKKKLGDARWLFDKMPV----RDAISWNTMISGYAQGGGLSQARRLFDE-------SP 262
Query: 527 LKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
+D +T MV + G LDEAKT + MP + + V N M+ YV
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE------------VSYNAMIAGYVQT 310
Query: 585 KLLEI--EPSNSGPYVLLSN---MYAELGRWGEVVRVRKLMRKRGVVKQPGC-SWIEIL- 637
K ++I E S P +S+ M G+ G++ + RK ++ Q C SW I+
Sbjct: 311 KKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF---DMMPQRDCVSWAAIIA 367
Query: 638 -----GH----VNVFM-VKDKRHPLNKEIY 657
GH +N+F+ +K LN+ +
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+I D L+ + F L +C ++ +++H + +K + + F+ N L+ +Y KCG
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCG 443
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ A F+ + K+V +WN+++ G +A+
Sbjct: 444 SIDEANDTFEGIEEKDVVSWNTMLAG-------------------------------YAR 472
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR---YSSD 185
H +AL F M + E + LSAC+ + GT+ ++K +S
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
Y + +ID+ G+ GR+ A+ + M + SW +L+
Sbjct: 533 HY--TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/658 (37%), Positives = 363/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++L CL+ K + ++VH IIKS+ + N L+ VY +CG L AR VF
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + K+ SWN+M++G+ +H +A+
Sbjct: 87 DALVKKS-------------------------------GASWNAMIAGYVEHKHAEDAMR 115
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E + ++ L ACA K G +VHA + SDV +G+AL+ MYG
Sbjct: 116 LFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYG 175
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG ++ ARR+FD + +I+SW +I Y Q+G +A + ++M G +P+ +T S
Sbjct: 176 KCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVS 235
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++ACAS A K ++H + L D+ +G ALV MYA
Sbjct: 236 ILNACASEGALKWVKRVHRHALDA-GLELDVRVGTALVQMYA------------------ 276
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
K+ S+ AR++F +M R+VVSWN +I + ++G EA LF ++
Sbjct: 277 -------------KSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ 323
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E P F ++LNACA+ L+ ++ H H + GL E D+ VG +L+ MY
Sbjct: 324 TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGL------EVDVRVGTALVHMYS 377
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K GS++D +F+ M R+ VSWNAMI G AQ+G G +AL +F++M G KPD VT +
Sbjct: 378 KSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVA 437
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHAGLV+EGR + +M++ +G+ P H CMVDLLGRAG L EAK I+ M +
Sbjct: 438 VLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVD 497
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD WG+LL +C+ + N+ LGE VAK+ L+++P N+ YVLLSN+YAE G+W V VR
Sbjct: 498 PDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVR 557
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+MR+RG+ K+PG SWIE+ ++ F+V D HP KEI + ++K GY+P+
Sbjct: 558 TMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPD 615
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/617 (39%), Positives = 361/617 (58%), Gaps = 25/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y + AR +FD+M +++F+WN ++TG ++ + DA RLF MPE+D
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS++SG+AQ+ EA F M +N S+ L+A + + LL
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIEEA----CLL 195
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+S+ D+ + L+ + + ++ AR +FD M R+ +SWN++I+ Y Q G S A
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQAR 255
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F DE V + A ++ + + G+ A+ E + V NA++
Sbjct: 256 RLF----------DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIA 305
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + K++ AR +F+ MP RN+ S +M++GY + + AR F M +R+ VSW A+
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IAGY Q+G EEAL +F +K++ TFG L+ CA++A L+LG+Q H VK G
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+ FVGN+L+ MY KCGS+++ FE + E+D VSWN M+ G A++G+G +A
Sbjct: 426 ------GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L +F+ M G KPD +TM+GVL ACSH GL++ G +YF SM+K++G+ P HYTCM+D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAG L+EA+ LI MP QP A WG+LL A ++H N LGE A+ + ++EP NSG
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW + ++R MR GV K PG SW+E+ ++ F V D HP + I
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L +M+ GYV
Sbjct: 660 YAYLEELDLKMREEGYV 676
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 152/305 (49%), Gaps = 31/305 (10%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
R+ ++F ++ Y + G L A+ FD+M KN ++N++I G ++ +D
Sbjct: 256 RLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDI 315
Query: 104 ASRLFASMPERDQCSWNSMVS-------------------------------GFAQHDRF 132
A LF SMP R+ SWN+M++ G+AQ +
Sbjct: 316 ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL FV++ + +L+ +FG ALS CA ++G Q+H K Y + ++G+AL
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MY KCG + A F+G+ E+++VSWN+++ Y ++G AL VF M +G++PDE
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T+ V+SAC+ G + + + + ++D+ + G+L EA+ +
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 313 RMPIR 317
MP +
Sbjct: 556 NMPFQ 560
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 205/441 (46%), Gaps = 60/441 (13%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
+ +S+ ++ N L+ + + L AR +FDKM ++ +WN++I+G + G + A
Sbjct: 195 LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA 254
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
RLF P RD +W +MVSG+ Q+ EA +F +M +N E S+ + + AG
Sbjct: 255 RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMI---AGY 307
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
V K + L +S ++ + +I YG+ G ++ AR+ FD M +R+ VSW ++I
Sbjct: 308 VQTKK-MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAII 366
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G +AL +FV + G + T +S CA +AA + G QIH + ++
Sbjct: 367 AGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKM-GY 425
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+GNAL+ MY KCG ++EA F+ + ++VVS +M++GYA+
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYAR------------- 472
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+G +AL +F +K V P T +L+AC
Sbjct: 473 ------------------HGFGRQALTVFESMKTAGVKPDEITMVGVLSAC--------- 505
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDW 457
+HT ++ G + D V + +ID+ + G +E+ + M +
Sbjct: 506 --SHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGA 563
Query: 458 VSWNAMIVGCAQNGYGTEALG 478
SW A++ A +G LG
Sbjct: 564 ASWGALL--GASRIHGNTELG 582
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 183/418 (43%), Gaps = 88/418 (21%)
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+++ +I+ WN I+ + +NG AL VF M
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMP--------------------------- 76
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
R V NA++ Y + K N AR +FD+MP R++ S M++GY +
Sbjct: 77 -------------RRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVR 123
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGN 390
+ AR +F M E++VVSWN+L++GY QNG +EA +F + ++ S+ ++
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSI-----SWNG 178
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL A + + + + L F S + D+ N L+ +++ + D +F+
Sbjct: 179 LLAAYVH----------NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP--DHVTMIGVLCACSHAGLV 508
M RD +SWN MI G AQ G ++A LF E P D T ++ G++
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFD------ESPTRDVFTWTAMVSGYVQNGML 282
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+E + +F M +++ ++ Y M+ + +D A+ L E+MP + + W +++
Sbjct: 283 DEAKTFFDEMPEKNEVS-----YNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMIT 336
Query: 569 ACKVHRNIMLGEYVAKKLLEIEP--------------SNSGPYVLLSNMYAELGRWGE 612
+I A+K ++ P + SG Y NM+ E+ + GE
Sbjct: 337 GYGQIGDIA----QARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 59/390 (15%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D++ N + + + G + A VF+ MP R+ VS +M+SGY + S AR +F +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ER++ SWN ++ GY +N +A LF L+ + V ++ +LL+ A + R+
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV----SWNSLLSGYAQNGYVDEARE 163
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
F + E + N L+ Y+ G +E+ C +FE+ + D +SWN ++ G
Sbjct: 164 V----------FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+ +A LF KM + D ++ ++ + G + + R+ F +P
Sbjct: 214 FVRKKKLGDARWLFDKMPV----RDAISWNTMISGYAQGGGLSQARRLFDE-------SP 262
Query: 527 LKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
+D +T MV + G LDEAKT + MP + + V N M+ YV
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNE------------VSYNAMIAGYVQT 310
Query: 585 KLLEI--EPSNSGPYVLLSN---MYAELGRWGEVVRVRKLMRKRGVVKQPGC-SWIEIL- 637
K ++I E S P +S+ M G+ G++ + RK ++ Q C SW I+
Sbjct: 311 KKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF---DMMPQRDCVSWAAIIA 367
Query: 638 -----GH----VNVFM-VKDKRHPLNKEIY 657
GH +N+F+ +K LN+ +
Sbjct: 368 GYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 38/147 (25%)
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L + GL++ G +YF M++E+ + P HYTCM+DLLGR L+E
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE------------ 818
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
G+LL A ++H N LGE A+ ++ P NSG + K
Sbjct: 819 -----GALLGASRIHGNTELGEKAAQMFFKMGPQNSG--------------------ISK 853
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMV 645
MR GV K PG SW E+ ++ F V
Sbjct: 854 -MRDVGVQKVPGYSWFEVQNKIHTFSV 879
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+I D L+ + F L +C ++ +++H + +K + + F+ N L+ +Y KCG
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCG 443
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ A F+ + K+V +WN+++ G +A+
Sbjct: 444 SIDEANDTFEGIEEKDVVSWNTMLAG-------------------------------YAR 472
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR---YSSD 185
H +AL F M + E + LSAC+ + GT+ ++K +S
Sbjct: 473 HGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSK 532
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
Y + +ID+ G+ GR+ A+ + M + SW +L+
Sbjct: 533 HY--TCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/598 (40%), Positives = 350/598 (58%), Gaps = 39/598 (6%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ +++T N+II+G K G I AS++F +RD SWN+M++GF F AL +
Sbjct: 30 TTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLK 89
Query: 141 KMHSENFALSEYSFGSALS--ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
M FA+ YSFGS L AC G V+ +G QVH+++ K Y +V+ GSAL+DMY K
Sbjct: 90 SMKRYGFAVDGYSFGSILKGVACVGYVE--VGQQVHSMMVKMGYEGNVFAGSALLDMYAK 147
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C RV A VF + RN V+WN+LI+ Y Q G A + M G+E D+ T A +
Sbjct: 148 CERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPL 207
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
++ K Q+HA++++ L +D + NA++ Y++CG + +A VFD
Sbjct: 208 LTLLDDPDLHKLTTQVHAKIVK-HGLASDTTVCNAIITAYSECGSIEDAERVFD------ 260
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
++++ L + VSWN+++ G++Q+G +E+AL F ++
Sbjct: 261 --------------GAIETRDL--------DHVSWNSILTGFSQSGLSEDALKFFENMRS 298
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ V HY F +L +C++LA LQLG+Q H V+K SG E + FV +SLI MY K
Sbjct: 299 QYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLK------SGFEPNGFVASSLIFMYSK 352
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG +ED + F+ + ++WN++I G AQ+G G AL LF M K DH+T + V
Sbjct: 353 CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAV 412
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVEEG + SM ++G+ P +HY CM+DLLGRAG LDEAK LIEAMP +P
Sbjct: 413 LTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEP 472
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
DA++W +LL AC+ +I L VA LLE+EP YVLLS+M+ L RW E +++
Sbjct: 473 DAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKR 532
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
LM++RGV K PG SWIE+ V F +D+ HP +EIYL L L E++R+ YV N+
Sbjct: 533 LMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVANS 590
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 214/490 (43%), Gaps = 85/490 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L V ++VH+ ++K + +F + L+D+YAKC + A +V
Sbjct: 98 VDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEV 157
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F ++ +N TWN++I+G +A + +R W
Sbjct: 158 FKSINIRNSVTWNALISG-------------YAQVGDRGTAFW----------------- 187
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
M E + + +F L+ K+ TQVHA + K +SD + +A+I Y
Sbjct: 188 -LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 197 GKCGRVSCARRVFDG---MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
+CG + A RVFDG R+ + VSWNS++T + Q+G + DAL+ F M + + D
Sbjct: 247 SECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHY 306
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
++V+ +C+ LA + G Q+H +++ N V ++L+ MY+KCG + +AR FD
Sbjct: 307 AFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFV-ASSLIFMYSKCGVIEDARKSFDA 365
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
P + ++ S++ GYA Q+G + AL LF
Sbjct: 366 TPKDSSIAWNSLIFGYA-------------------------------QHGRGKIALDLF 394
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS-- 431
L+K V H TF +L AC +H +V+ G FL ESD +
Sbjct: 395 FLMKDRRVKLDHITFVAVLTAC-----------SHIGLVEEGWSFLKSMESDYGIPPRME 443
Query: 432 ----LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+ID+ + G +++ + E M E D + W ++ C G E LL
Sbjct: 444 HYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCG-DIELASQVASHLLE 502
Query: 487 GEKPDHVTMI 496
E +H T +
Sbjct: 503 LEPEEHCTYV 512
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
V H L SG + I+ N++I Y KCG + ++F +RD VSWN MI G G
Sbjct: 20 VNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLG 79
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
AL K M G D + +L + G VE G++ S M K G
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVK-MGYEGNVFAG 138
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ ++D+ + +++A + +++ ++ ++V W +L++
Sbjct: 139 SALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/672 (36%), Positives = 383/672 (56%), Gaps = 62/672 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DSS +A LL+SC ++++ ++VHA +K+ F F++ +L+ +Y + GCL
Sbjct: 60 IDSSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCL------ 110
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DDA+ +F MP+R+ SW +++S H F EAL
Sbjct: 111 -------------------------DDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEAL 145
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK------------SRYS- 183
F K+ ++ L + F L C G ++G Q+H ++ K S +S
Sbjct: 146 SLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSV 205
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFV 241
+V + +I Y + G V A+ +FD M ++ +SWNS+I+ Y N +AL +F
Sbjct: 206 KNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFR 265
Query: 242 RM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+ M GIE D TL SV++ACA +A+ + G ++HA+ + L + +G ALV+MY+K
Sbjct: 266 DLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAV-VRGLHWNTFVGGALVEMYSK 324
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNAL 356
C L A+ FD + R+ + ++SGYA + +++ + + KM E NV +WN +
Sbjct: 325 CEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGI 384
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+G+ +NG NE AL LF ++ S+ P YT G +L ACA LA + G+Q H H ++ G
Sbjct: 385 ISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGY 444
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
E D+ +G +L+DMY KCGS++ +++ + + VS NAM+ A +G+G E
Sbjct: 445 ------ELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEG 498
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ LF+ ML G +PDHVT + VL +C HAG VE G ++F M+ + + P HYTC+VD
Sbjct: 499 IALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVD 557
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LL RAG LDEA L++ +P +PD+V+WG+LL C + N+ LGE A+ L+E+EP+N+G
Sbjct: 558 LLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGN 617
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLL+N+YA GRW ++ R R++++ RG+ K PGCSWIE ++VF+ DK H ++I
Sbjct: 618 YVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDI 677
Query: 657 YLVLKMLTREMK 668
Y L L M+
Sbjct: 678 YTTLDNLNTHMR 689
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 368/655 (56%), Gaps = 51/655 (7%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + S +A +L SC + ++HA +KS FA++ ++ +D+YAKC + A+
Sbjct: 235 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 294
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD N N ++N++IT G++Q + +
Sbjct: 295 ILFDNSENLNRQSYNAMIT-------------------------------GYSQEEHGFK 323
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F ++ S E S ACA G Q++ L KS S DV + +A ID
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 383
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKC ++ A RVFD MR R+ VSWN++I +EQNG + L +FV M+ S IEPDE T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++ AC + G++IH+ +++ N V G +L+DMY+KCG + EA + R
Sbjct: 444 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV-GCSLIDMYSKCGMIEEAEKIHSRF 501
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R VS T ++ M K L+ VSWN++I+GY ++E+A LF
Sbjct: 502 FQRANVSGT-----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + P +T+ +L+ CANLA LG+Q H V+K L +SD+++ ++L+D
Sbjct: 551 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL------QSDVYICSTLVD 604
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + D +FE + RD+V+WNAMI G A +G G EA+ LF++M+L KP+HVT
Sbjct: 605 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 664
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I +L AC+H GL+++G +YF M +++GL P HY+ MVD+LG++G + A LI M
Sbjct: 665 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 724
Query: 555 PMQPDAVIWGSLLAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
P + D VIW +LL C +HR N+ + E LL ++P +S Y LLSN+YA+ G W +V
Sbjct: 725 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 784
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+R+ MR + K+PGCSW+E+ ++VF+V DK HP +EIY L ++ EMK
Sbjct: 785 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 257/523 (49%), Gaps = 42/523 (8%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
C + ++ ++ HA +I S F F+ N L+ VY A VFDKM ++V +W
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N +I G K + A+ F MP RD SWNSM+SG+ Q+ +++ FV M E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+F L C+ D +G Q+H ++ + +DV SAL+DMY K R + RV
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F G+ E+N VSW+++I QN S AL+ F M + ASV+ +CA+L+
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ G Q+HA ++ + D ++ A +DMYAKC + +A+ +FD N S +M++G
Sbjct: 256 RLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL-GLFRLLKRESVCPTHYT 387
Y++ A L+F +++ + G +E +L G+FR
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGL-------------GFDEISLSGVFR------------- 348
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
ACA + L G Q + +K L D+ V N+ IDMY KC ++ + R
Sbjct: 349 ------ACALVKGLSEGLQIYGLAIKSSLSL------DVCVANAAIDMYGKCQALAEAFR 396
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M RD VSWNA+I QNG G E L LF ML +PD T +L AC+ G
Sbjct: 397 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGS 455
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ G + SS+ K G+A ++D+ + G ++EA+ +
Sbjct: 456 LGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 497
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 265/579 (45%), Gaps = 96/579 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D FA +L C + S ++H +++ +++ + L+D+YAK + +V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + KN +W++II G + Q++ S AL
Sbjct: 196 FQGIPEKNSVSWSAIIAGCV-------------------------------QNNLLSLAL 224
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F +M N +S+ + S L +CA + ++G Q+HA KS +++D + +A +DMY
Sbjct: 225 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + A+ +FD N S+N++IT Y Q AL +F R+M+SG+ DE++L+
Sbjct: 285 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 344
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V ACA + EGLQI+ ++ L D+ + NA +DMY KC L EA VFD M
Sbjct: 345 GVFRACALVKGLSEGLQIYGLAIK-SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R + VSWNA+IA + QNG+ E L LF +
Sbjct: 404 R-------------------------------DAVSWNAIIAAHEQNGKGYETLFLFVSM 432
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P +TFG++L AC L G + H+ +VK SG S+ VG SLIDMY
Sbjct: 433 LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK------SGMASNSSVGCSLIDMY 485
Query: 437 MKCGSVEDGCRIFETMVERD--------------------WVSWNAMIVGCAQNGYGTEA 476
KCG +E+ +I +R VSWN++I G +A
Sbjct: 486 SKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--M 534
LF +M+ G PD T VL C++ G++ + + K+ D Y C +
Sbjct: 546 QMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTL 602
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
VD+ + G L +++ + E ++ D V W +++ H
Sbjct: 603 VDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHH 640
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/676 (36%), Positives = 392/676 (57%), Gaps = 43/676 (6%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
Q +K+ G LA S ++ L++ C KS+ + VHA++IK F + F+ NR +D+
Sbjct: 23 QPFLKKAHGPLA-TSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDL 81
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y++ G + +VF+ + +KN+ +WN + +++G ++ A +F MP+RD SWN+M+
Sbjct: 82 YSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMI 141
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
SG+ F +A +F +M S +++ + LS + + G Q+HA + ++
Sbjct: 142 SGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR---GKQIHASMIRNGVD 198
Query: 184 -SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
S+V +G++LI MYGK G V A VF M E +I SWNSLI ++G + AL FV
Sbjct: 199 LSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVL 258
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M + G PD+ T+++V++ C++L ++G QI A +R L N +V +A +D+++KC
Sbjct: 259 MRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIV-SSASIDLFSKCN 317
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+L ++ VF+ ++ + + V NA+I+ Y
Sbjct: 318 RLEDSVRVFE-------------------------------EIYQWDSVLCNAMISSYAW 346
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+G E AL LF L RE++ PT +T +L+A + L + G Q H+ VVK GL
Sbjct: 347 HGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGL------ 400
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
ESD+ V +SL++MY K G ++ + F + RD +SWN MI+G A NG ++AL +FK+
Sbjct: 401 ESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKE 460
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
+L+ G PD +T+ GVL AC+ GLV+EG FSSM KE+G+ P +HY C+VD++ R G
Sbjct: 461 LLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGG 520
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L EA ++E MP +P +IWGSLL AC+++ ++ E VA++++E+EP +S PY++L+
Sbjct: 521 KLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQ 580
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
Y GRW +VRVR+ M+++GV K GCSWI I HV VF H K+IY +L++
Sbjct: 581 AYEMRGRWESLVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKENQLLHIGGKDIYFILRL 640
Query: 663 LTREMKRVGYVPNASD 678
L +E++ GY D
Sbjct: 641 LIQEIEDDGYASQQYD 656
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/579 (39%), Positives = 349/579 (60%), Gaps = 10/579 (1%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D A LF+ +P N ++ F++ L ++ + F L +SF L A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 161 CAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
+ +G ++H L SK + +D ++ SALI MY CGR+ AR +FD M R++V+
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN +I Y QN L+++ M SG EPD + L +V+SACA G IH + +
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIH-QFI 243
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ R + +LV+MYA CG ++ AR V+D++P +++V T+M+SGYAK V+ AR
Sbjct: 244 KDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDAR 303
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F +M+E+++V W+A+I+GY ++ + EAL LF ++R + P T ++++ACAN+
Sbjct: 304 FIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVG 363
Query: 400 DLQLGRQAHTHVVKHGL-RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L + HT+ K+G R L + N+LIDMY KCG++ +FE M ++ +
Sbjct: 364 ALVQAKWIHTYADKNGFGRTLP-------INNALIDMYAKCGNLVKAREVFENMPRKNVI 416
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW++MI A +G A+ LF +M +P+ VT IGVL ACSHAGLVEEG+K+FSSM
Sbjct: 417 SWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSM 476
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
EH ++P ++HY CMVDL RA L +A LIE MP P+ +IWGSL++AC+ H I L
Sbjct: 477 INEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIEL 536
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
GE+ A +LLE+EP + G V+LSN+YA+ RW +V VRKLM+ +GV K+ CS IE+
Sbjct: 537 GEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNN 596
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+VFM+ D+ H + EIY L + ++K VGY P+ S
Sbjct: 597 EVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTS 635
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 172/331 (51%), Gaps = 1/331 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +L +C + ++S + +H I + F IQ L+++YA CG ++ AR+V+
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +K++ ++++G K G + DA +F M E+D W++M+SG+A+ + EAL
Sbjct: 276 DQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQ 335
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S +SACA +H K+ + + + +ALIDMY
Sbjct: 336 LFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYA 395
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VF+ M +N++SW+S+I + +G A A+ +F RM IEP+ VT
Sbjct: 396 KCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIG 455
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI- 316
V+ AC+ +EG + + ++ ++ +VD+Y + L +A + + MP
Sbjct: 456 VLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFP 515
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
NV+ S++S ++ T++LE
Sbjct: 516 PNVIIWGSLMSACQNHGEIELGEFAATRLLE 546
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 223/522 (42%), Gaps = 115/522 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGARK 75
LD F LL + + +++ +H K F ++ FIQ+ LI +YA CG + AR
Sbjct: 113 LDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARF 172
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FDK M RD +WN M+ G++Q+ +
Sbjct: 173 LFDK-------------------------------MSHRDVVTWNIMIDGYSQNAHYDHV 201
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L + +M + + LSACA + + G +H + + + ++ ++L++M
Sbjct: 202 LKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNM 261
Query: 196 YGKCGRVSCARRV-------------------------------FDGMRERNIVSWNSLI 224
Y CG + AR V FD M E+++V W+++I
Sbjct: 262 YANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMI 321
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Y ++ +AL++F M I PD++T+ SV+SACA++ A + IH +
Sbjct: 322 SGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK-NGF 380
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
L + NAL+DMYAKCG L +AR VF+ MP +NV+S +SM++ +A SA +F +
Sbjct: 381 GRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHR 440
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M E+N+ P TF +L AC
Sbjct: 441 MKEQNIE-------------------------------PNGVTFIGVLYAC--------- 460
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDW 457
+H +V+ G +F S ++ + ++D+Y + + + ETM +
Sbjct: 461 --SHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNV 518
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+ W +++ C QN +G LG F L +PDH + VL
Sbjct: 519 IIWGSLMSAC-QN-HGEIELGEFAATRLLELEPDHDGALVVL 558
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 371/669 (55%), Gaps = 81/669 (12%)
Query: 28 SCLRSKSVSDT------RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
S L + +++ T + VH K+ F S++ + N LI +YAKCG
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGS------------ 284
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
IDDA +F M +RD SWN+M+ G AQ+ EA F+K
Sbjct: 285 -------------------IDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLK 325
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E F ++ S L+ + ++ +VH + SD+ +GSA + MY +CG
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGS 385
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A+ +FD + RN+ +WN++I Q +AL +F++M G PD T +++SA
Sbjct: 386 IDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + ++H+ + + DL +GNALV MYAKCG
Sbjct: 446 NVGEEALEWVKEVHSYAIDAGLV--DLRVGNALVHMYAKCGN------------------ 485
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ YAK +F M+ERNV +W +I+G Q+G EA LF + RE +
Sbjct: 486 -----TMYAKQ--------VFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGI 532
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T+ ++L+ACA+ L+ ++ H+H V GL SD+ VGN+L+ MY KCGS
Sbjct: 533 VPDATTYVSILSACASTGALEWVKEVHSHAVNAGLV------SDLRVGNALVHMYAKCGS 586
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V+D R+F+ M+ERD SW MI G AQ+G G +AL LF KM L G KP+ + + VL A
Sbjct: 587 VDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSA 646
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSHAGLV+EGR+ F S+++++G+ P +HYTCMVDLLGRAG L+EAK I MP++P
Sbjct: 647 CSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDA 706
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
WG+LL AC + N+ + E+ AK+ L+++P ++ YVLLSN+YA G W + + VR +M+
Sbjct: 707 PWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQ 766
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA----- 676
+RG+ K+PG SWIE+ ++ F+V D HP +KEIY LK L + +K GYVP+
Sbjct: 767 RRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLR 826
Query: 677 SDDEAYEEQ 685
+ D+ Y+EQ
Sbjct: 827 NTDQEYKEQ 835
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 283/590 (47%), Gaps = 80/590 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S + +L++ + ++ + VH+ + + A ++ + N L+ +YAK G
Sbjct: 130 NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS-------- 181
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
IDDA +F M ERD SW M+ G AQH R EA
Sbjct: 182 -----------------------IDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFS 218
Query: 138 YFVKMHSENFALSEYSFGSALSACA----GSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
F++M + ++ S L+A A G++++ +VH K+ + SD+ +G+ALI
Sbjct: 219 LFLQMERGGCLPNLTTYLSILNASAITSTGALEWV--KEVHKHAGKAGFISDLRVGNALI 276
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KCG + AR VFDGM +R+++SWN++I QNG +A +F++M G PD
Sbjct: 277 HMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDST 336
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S+++ S A++ ++H + L +DL +G+A V MY +CG +++A+ +FD+
Sbjct: 337 TYLSLLNTHVSTGAWEWVKEVHKHAVEV-GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK 395
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ +RNV + +M+ G A Q EAL LF
Sbjct: 396 LAVRNVTTWNAMIGGVA-------------------------------QQKCGREALSLF 424
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++RE P TF N+L+A L+ ++ H++ + GL D+ VGN+L+
Sbjct: 425 LQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-------VDLRVGNALV 477
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY KCG+ ++F+ MVER+ +W MI G AQ+G G EA LF +ML G PD
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDAT 537
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T + +L AC+ G + E K S + GL +V + + G +D+A+ + +
Sbjct: 538 TYVSILSACASTGAL-EWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDD 596
Query: 554 MPMQPDAVIWGSLLAACKVHRNIM--LGEYVAKKLLEIEPSNSGPYVLLS 601
M ++ D W ++ H + L +V KL +P+ +LS
Sbjct: 597 M-LERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 191/665 (28%), Positives = 306/665 (46%), Gaps = 135/665 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L +C S+ +++HA II+S F S++ ++ L+++Y KCG
Sbjct: 33 YLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS------------ 80
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
IDDA +F M ER+ SW M+ G A + R EA F++
Sbjct: 81 -------------------IDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQ 121
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E F + Y++ S L+A A + + +VH+ + + D+ +G+AL+ MY K G
Sbjct: 122 MQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGS 181
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VFDGM ER+I SW +I Q+G +A +F++M G P+ T S+++A
Sbjct: 182 IDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNA 241
Query: 262 CA--SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A S A + ++H + + +DL +GNAL+ MYAKCG +++AR VFD M R+V
Sbjct: 242 SAITSTGALEWVKEVHKHAGKAGFI-SDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+S +M+ G A QNG EA +F +++E
Sbjct: 301 ISWNAMIGGLA-------------------------------QNGCGHEAFTIFLKMQQE 329
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P T+ +LLN + + ++ H H V+ GL SD+ VG++ + MY++C
Sbjct: 330 GFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLV------SDLRVGSAFVHMYIRC 383
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS++D IF+ + R+ +WNAMI G AQ G EAL LF +M G PD T + +L
Sbjct: 384 GSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443
Query: 500 CACSHAGLVEEGRKYFS---SMSKEHGLAPLK---------------------------- 528
A + EE ++ S + + GL L+
Sbjct: 444 S----ANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVER 499
Query: 529 --DHYTCMVDLLGRAGCLDEAKTLIEAMPMQ---PDAVIWGSLLAAC----------KVH 573
+T M+ L + GC EA +L M + PDA + S+L+AC +VH
Sbjct: 500 NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 559
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+ + V+ ++ N+ L +MYA+ G + RV M +R V SW
Sbjct: 560 SHAVNAGLVS----DLRVGNA-----LVHMYAKCGSVDDARRVFDDMLERDVY-----SW 605
Query: 634 IEILG 638
++G
Sbjct: 606 TVMIG 610
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 227/450 (50%), Gaps = 42/450 (9%)
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
M+ G+A++ +A+ + +M E +E ++ S L AC V K G ++HA + +S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
+ SDV + +AL++MY KCG + A+ +FD M ERN++SW +I G +A F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M G P+ T S+++A AS A + ++H+ + L DL +GNALV MYAK
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKS 179
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G +++AR VFD M R++ S T M+ G A
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLA------------------------------- 208
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA--NLADLQLGRQAHTHVVKHGLRFL 419
Q+G +EA LF ++R P T+ ++LNA A + L+ ++ H H K G
Sbjct: 209 QHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFI-- 266
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
SD+ VGN+LI MY KCGS++D +F+ M +RD +SWNAMI G AQNG G EA +
Sbjct: 267 ----SDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTI 322
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F KM G PD T + +L G E K + E GL + V +
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTG-AWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYI 381
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R G +D+A+ + + + ++ + W +++
Sbjct: 382 RCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 215/460 (46%), Gaps = 80/460 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ + LL++ + + + + VH ++ S++ + + + +Y +CG + A+ +F
Sbjct: 334 DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIF 393
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK++ +NV TWN +M+ G AQ EAL
Sbjct: 394 DKLAVRNVTTWN-------------------------------AMIGGVAQQKCGREALS 422
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M E F +F + LSA G + +VH+ + D+ +G+AL+ MY
Sbjct: 423 LFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYA 481
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG A++VFD M ERN+ +W +I+ Q+G +A +F++M+ GI PD T S
Sbjct: 482 KCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVS 541
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SACAS A + ++H+ + L +DL +GNALV MYAKCG +++AR VFD M R
Sbjct: 542 ILSACASTGALEWVKEVHSHAVNA-GLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLER 600
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V S T M+ G A Q+G +AL LF +K
Sbjct: 601 DVYSWTVMIGGLA-------------------------------QHGRGLDALDLFVKMK 629
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS-----GEESDIFVGNSL 432
E P Y+F +L+AC++ + GR+ +FLS G E + +
Sbjct: 630 LEGFKPNGYSFVAVLSACSHAGLVDEGRR----------QFLSLTQDYGIEPTMEHYTCM 679
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+D+ + G +E+ M +E W A++ C G
Sbjct: 680 VDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYG 719
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+I GY + G E+A+ ++ ++RE P T+ ++L AC + L+ G++ H H+++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQ-- 58
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
SG +SD+ V +L++MY+KCGS++D IF+ MVER+ +SW MI G A G G E
Sbjct: 59 ----SGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 114
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
A F +M G P+ T + +L A + AG + E K S + GLA +V
Sbjct: 115 AFHRFLQMQREGFIPNSYTYVSILNANASAGAL-EWVKEVHSHAVNAGLALDLRVGNALV 173
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ ++G +D+A+ + + M ++ D W ++ H
Sbjct: 174 HMYAKSGSIDDARVVFDGM-VERDIFSWTVMIGGLAQH 210
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 368/655 (56%), Gaps = 51/655 (7%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + S +A +L SC + ++HA +KS FA++ ++ +D+YAKC + A+
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD N N ++N++IT G++Q + +
Sbjct: 337 ILFDNSENLNRQSYNAMIT-------------------------------GYSQEEHGFK 365
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F ++ S E S ACA G Q++ L KS S DV + +A ID
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKC ++ A RVFD MR R+ VSWN++I +EQNG + L +FV M+ S IEPDE T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++ AC + G++IH+ +++ N V G +L+DMY+KCG + EA + R
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV-GCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R VS T ++ M K L+ VSWN++I+GY ++E+A LF
Sbjct: 544 FQRANVSGT-----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + P +T+ +L+ CANLA LG+Q H V+K L +SD+++ ++L+D
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL------QSDVYICSTLVD 646
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + D +FE + RD+V+WNAMI G A +G G EA+ LF++M+L KP+HVT
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I +L AC+H GL+++G +YF M +++GL P HY+ MVD+LG++G + A LI M
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 555 PMQPDAVIWGSLLAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
P + D VIW +LL C +HR N+ + E LL ++P +S Y LLSN+YA+ G W +V
Sbjct: 767 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 826
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+R+ MR + K+PGCSW+E+ ++VF+V DK HP +EIY L ++ EMK
Sbjct: 827 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 263/535 (49%), Gaps = 42/535 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ ++ F+ + C + ++ ++ HA +I S F F+ N L+ VY A V
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKM ++V +WN +I G K + A+ F MP RD SWNSM+SG+ Q+ +++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV M E +F L C+ D +G Q+H ++ + +DV SAL+DMY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K R + RVF G+ E+N VSW+++I QN S AL+ F M + A
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ +CA+L+ + G Q+HA ++ + D ++ A +DMYAKC + +A+ +FD
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL-GLFRL 375
N S +M++GY++ A L+F +++ + G +E +L G+FR
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL-------------GFDEISLSGVFR- 390
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
ACA + L G Q + +K L D+ V N+ IDM
Sbjct: 391 ------------------ACALVKGLSEGLQIYGLAIKSSLSL------DVCVANAAIDM 426
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KC ++ + R+F+ M RD VSWNA+I QNG G E L LF ML +PD T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+L AC+ G + G + SS+ K G+A ++D+ + G ++EA+ +
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 85/473 (17%)
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+ YF ++ ++S +F CA ++G Q HA + S + ++ + L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSW-------------------------------NSL 223
+Y A VFD M R++VSW NS+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR--C 281
++ Y QNG + ++EVFV M GIE D T A ++ C+ L G+QIH ++R C
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ D+V +AL+DMYAK + E+ VF +P +N V
Sbjct: 212 D---TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV--------------------- 247
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
SW+A+IAG QN AL F+ +++ + + + ++L +CA L++L
Sbjct: 248 ----------SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+LG Q H H +K S +D V + +DMY KC +++D +F+ + S+N
Sbjct: 298 RLGGQLHAHALK------SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF-----S 516
AMI G +Q +G +AL LF +++ G D +++ GV AC+ + EG + + S
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S+S + +A +D+ G+ L EA + + M + DAV W +++AA
Sbjct: 412 SLSLDVCVA------NAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/676 (36%), Positives = 376/676 (55%), Gaps = 77/676 (11%)
Query: 41 VHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
VH ++++ ++ N L+ YA+ G L AR++FD M + N+FT N++++ L
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL-------SEY 152
+ D RLFASMP+RD S+N++++GF+ + A G + + E + S
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ + A + D +G QVH + + + + + S L+DMY K G + A+RVFD M
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210
Query: 213 RERNIV-------------------------------SWNSLITCYEQNGPASDALEVFV 241
+N+V +W +++T QNG S+AL+VF
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
RM A G+ D+ T S+++AC +LAA +EG QIHA +R ++ +G+ALVDMY+KC
Sbjct: 271 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIR-TLYDGNIFVGSALVDMYSKC 329
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
S++ A +F +M +N++SW A+I GY
Sbjct: 330 -------------------------------RSIRLAEAVFRRMTCKNIISWTAMIVGYG 358
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QNG EEA+ +F ++ + + P +T G+++++CANLA L+ G Q H + GLR
Sbjct: 359 QNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLR---- 414
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
I V ++L+ +Y KCGS+ED R+F+ M D VS+ A++ G AQ G E + LF+
Sbjct: 415 --PYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFE 472
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KMLL G KP+ VT IGVL ACS +GLVE+G YF SM ++HG+ L DHYTCM+DL R+
Sbjct: 473 KMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRS 532
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G L EA+ I MP PDA+ W +LL+AC++ ++ +G++ A+ LL+ +P N YVLL
Sbjct: 533 GRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLC 592
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
+M+A G W EV +R+ MR R V K+PGCSWI+ V++F D+ HP + IY L+
Sbjct: 593 SMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQ 652
Query: 662 MLTREMKRVGYVPNAS 677
L +M GY P+ S
Sbjct: 653 WLNSKMAEEGYKPDVS 668
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 228/415 (54%), Gaps = 44/415 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+VH +I++ F + F + L+D+YAK G + A++VFD+M KNV +N++ITGLL+
Sbjct: 169 RQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRC 228
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+++A +F +M +RD +W +MV+G Q+ SEAL F +M +E + +Y+FGS L
Sbjct: 229 KMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSIL 288
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+AC + G Q+HA ++ Y ++++GSAL+DMY KC + A VF M +NI+
Sbjct: 289 TACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNII 348
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW ++I Y QNG +A+ VF M GI+P++ TL SV+S+CA+LA+ +EG Q H
Sbjct: 349 SWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMA 408
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ LR + + +ALV +Y KCG + +A +FD MP + VS T++VSGYA+ K
Sbjct: 409 L-VSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKET 467
Query: 339 RLMFTKMLERNVVS----------------------------------------WNALIA 358
+F KML + V + +I
Sbjct: 468 IDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMID 527
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
Y+++G +EA R + R CP + LL+AC D+++G+ A +++K
Sbjct: 528 LYSRSGRLKEAEEFIRQMPR---CPDAIGWATLLSACRLRGDMEIGKWAAENLLK 579
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 151/303 (49%), Gaps = 39/303 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L +C + + +++HA I++ + IF+ + L+D+Y+KC + A V
Sbjct: 279 IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAV 338
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M+ KN+ +W ++I G+ Q+ EA+
Sbjct: 339 FRRMTCKNIISWTAMIV-------------------------------GYGQNGCGEEAV 367
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M ++ ++++ GS +S+CA + G Q H + S + + SAL+ +Y
Sbjct: 368 RVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLY 427
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + A R+FD M + VS+ +L++ Y Q G A + +++F +M+ G++P+ VT
Sbjct: 428 GKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFI 487
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN----ALVDMYAKCGKLNEARCVFD 312
V+SAC+ ++G + + + +VL + ++D+Y++ G+L EA
Sbjct: 488 GVLSACSRSGLVEKGCSYFHSMQQ----DHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIR 543
Query: 313 RMP 315
+MP
Sbjct: 544 QMP 546
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/704 (35%), Positives = 374/704 (53%), Gaps = 77/704 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D+ +L +C + + + VH ++K F + +F+ + L+D+Y KCG L
Sbjct: 179 FPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVL----- 233
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+DA ++F SM E++ +WNSM+ G+ Q+ EA
Sbjct: 234 --------------------------EDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEA 267
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M E + + S LSA A G Q HA+ + D +GS++I+
Sbjct: 268 IDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINF 327
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + A VF M E+++V+WN LI+ Y Q+ AL + M + + D VTL
Sbjct: 328 YSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTL 387
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S++SA A + K G + H +R L +D+V+ N+++DMYAKC ++++AR VFD
Sbjct: 388 SSILSASAVTSNIKLGKEGHCYCIR-RNLESDVVVANSIIDMYAKCERIDDARKVFDSTT 446
Query: 316 IR-----------------------------------NVVSETSMVSGYAKASSVKSARL 340
R NV+S S++ G+ + V A+
Sbjct: 447 ERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKD 506
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
MF++M + N+++W LI+G Q+G EA+ F+ ++ + P+ + ++L AC
Sbjct: 507 MFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACT 566
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
++ L GR H + +H + V SL+DMY KCGS+++ ++F M ++
Sbjct: 567 DIPSLWYGRAIHGFITRHEFCL------SVPVATSLVDMYAKCGSIDEAKKVFHMMSSKE 620
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+NAMI A +G EAL LFK + G +PD +T +L ACSHAGLV EG F+
Sbjct: 621 LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFA 680
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M +H + P+ +HY C+V LL R G LDEA LI MP QPDA I GSLL AC+ H I
Sbjct: 681 DMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEI 740
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
LGEY++K L ++EPSNSG YV LSN YA GRW EV +R LM+ RG+ K PGCSWI+
Sbjct: 741 ELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQT 800
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
G +NVF+ D HP +EIY +L ML EM+ +GYVP AS++E
Sbjct: 801 GGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIASNEE 844
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 186/608 (30%), Positives = 303/608 (49%), Gaps = 76/608 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ +LL C+ +++ +++HARI+K+ FA +++ +L+ YAKC A ++F +
Sbjct: 82 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHR 141
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +NVF+W +I+ + GF +DA F M E G F
Sbjct: 142 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQEN----------------------GVF 179
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+NF L + L AC +G VH + K + + V++ S+L+DMYGKC
Sbjct: 180 ----PDNFVLP-----NVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 230
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VFD M E+N+V+WNS+I Y QNG +A++VF M GIEP VT+AS +
Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA A+L A EG Q HA + L D +LG+++++ Y+K G + +A VF RM
Sbjct: 291 SASANLDALIEGKQGHA-IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM----- 344
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
LE++VV+WN LI+ Y Q+ + +AL + L++ E
Sbjct: 345 --------------------------LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSE 378
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ T ++L+A A ++++LG++ H + ++ L ESD+ V NS+IDMY KC
Sbjct: 379 NLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL------ESDVVVANSIIDMYAKC 432
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++D ++F++ ERD V WN ++ AQ G EAL LF +M P+ ++ V+
Sbjct: 433 ERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI 492
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---M 556
G V E + FS M + G P +T ++ L ++G EA + M +
Sbjct: 493 LGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGI 551
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL-LSNMYAELGRWGEVVR 615
+P S+L AC ++ G + + E S P L +MYA+ G E +
Sbjct: 552 RPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKK 611
Query: 616 VRKLMRKR 623
V +M +
Sbjct: 612 VFHMMSSK 619
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 225/477 (47%), Gaps = 54/477 (11%)
Query: 104 ASRLFASMPERDQC------SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
AS A + E+D+ S+ +S + E++ +M E+F + +G
Sbjct: 26 ASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGEL 85
Query: 158 LSACAGSVDFKMGTQVHALLSKSR--YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
L C G Q+HA + K+ ++ + Y+ + L+ Y KC A R+F +R R
Sbjct: 86 LQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVR 145
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ SW +++ + G + DAL F+ M +G+ PD L +V+ AC SL G +H
Sbjct: 146 NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVH 205
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + + ++LVDMY KCG L +AR VFD M +NVV+ SM
Sbjct: 206 GYVLKM-GFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM---------- 254
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
I GY QNG N+EA+ +F ++ E + PT T + L+A
Sbjct: 255 ---------------------IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 293
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
ANL L G+Q H + L+ + D +G+S+I+ Y K G +ED +F M+E+
Sbjct: 294 ANLDALIEGKQG------HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK 347
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA---CSHAGLVEEGR 512
D V+WN +I Q+ +AL + M + D VT+ +L A S+ L +EG
Sbjct: 348 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 407
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
Y + E + ++D+ + +D+A+ + ++ + D V+W +LLAA
Sbjct: 408 CYCIRRNLESDVVVANS----IIDMYAKCERIDDARKVFDS-TTERDLVLWNTLLAA 459
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 50/354 (14%)
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
++G +++ + M + ++ C A G QIHAR+ L+N
Sbjct: 56 KDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARI-----LKNG- 109
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
D +AK N ET +V YAK + A +F ++ R
Sbjct: 110 -------DFFAK-----------------NEYVETKLVVFYAKCDFPEVAVRLFHRLRVR 145
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
NV SW A++ + G +E+AL F ++ V P ++ N+L AC +L + LG+ H
Sbjct: 146 NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVH 205
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
+V+K G + +FV +SL+DMY KCG +ED ++F++MVE++ V+WN+MIVG
Sbjct: 206 GYVLKMGFG------ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYV 259
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
QNG EA+ +F M + G +P VT+ L A ++ + EG+ + H +A L
Sbjct: 260 QNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGK-------QGHAIAILN 312
Query: 529 ----DHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
D+ + +++ + G +++A+ + M ++ D V W L+++ H +
Sbjct: 313 SLDLDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQHHQV 365
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 331 KASSVKSARLMFTKMLERN------VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
K+S S RL K+ E++ S+ I+ ++G +E++ L ++ E
Sbjct: 21 KSSKFASTRL--AKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIG 78
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+G LL C L G+Q H ++K+G F E +V L+ Y KC E
Sbjct: 79 PEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNE----YVETKLVVFYAKCDFPEV 134
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R+F + R+ SW A++ + G+ +AL F +M G PD+ + VL AC
Sbjct: 135 AVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGS 194
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
L+ G+ + K G + +VD+ G+ G L++A+ + ++M ++ + V W
Sbjct: 195 LQLIGLGKGVHGYVLK-MGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-VEKNVVTWN 252
Query: 565 SLL 567
S++
Sbjct: 253 SMI 255
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 251/704 (35%), Positives = 374/704 (53%), Gaps = 77/704 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D+ +L +C + + + VH ++K F + +F+ + L+D+Y KCG L
Sbjct: 1274 FPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVL----- 1328
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+DA ++F SM E++ +WNSM+ G+ Q+ EA
Sbjct: 1329 --------------------------EDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEA 1362
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M E + + S LSA A G Q HA+ + D +GS++I+
Sbjct: 1363 IDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINF 1422
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + A VF M E+++V+WN LI+ Y Q+ AL + M + + D VTL
Sbjct: 1423 YSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTL 1482
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S++SA A + K G + H +R L +D+V+ N+++DMYAKC ++++AR VFD
Sbjct: 1483 SSILSASAVTSNIKLGKEGHCYCIR-RNLESDVVVANSIIDMYAKCERIDDARKVFDSTT 1541
Query: 316 IR-----------------------------------NVVSETSMVSGYAKASSVKSARL 340
R NV+S S++ G+ + V A+
Sbjct: 1542 ERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKD 1601
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
MF++M + N+++W LI+G Q+G EA+ F+ ++ + P+ + ++L AC
Sbjct: 1602 MFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACT 1661
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
++ L GR H + +H + V SL+DMY KCGS+++ ++F M ++
Sbjct: 1662 DIPSLWYGRAIHGFITRHEFCL------SVPVATSLVDMYAKCGSIDEAKKVFHMMSSKE 1715
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+NAMI A +G EAL LFK + G +PD +T +L ACSHAGLV EG F+
Sbjct: 1716 LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFA 1775
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M +H + P+ +HY C+V LL R G LDEA LI MP QPDA I GSLL AC+ H I
Sbjct: 1776 DMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEI 1835
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
LGEY++K L ++EPSNSG YV LSN YA GRW EV +R LM+ RG+ K PGCSWI+
Sbjct: 1836 ELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQT 1895
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
G +NVF+ D HP +EIY +L ML EM+ +GYVP AS++E
Sbjct: 1896 GGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIASNEE 1939
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 186/608 (30%), Positives = 303/608 (49%), Gaps = 76/608 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ +LL C+ +++ +++HARI+K+ FA +++ +L+ YAKC A ++F +
Sbjct: 1177 YGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHR 1236
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +NVF+W +I+ + GF +DA F M E G F
Sbjct: 1237 LRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQEN----------------------GVF 1274
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+NF L + L AC +G VH + K + + V++ S+L+DMYGKC
Sbjct: 1275 ----PDNFVLP-----NVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 1325
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VFD M E+N+V+WNS+I Y QNG +A++VF M GIEP VT+AS +
Sbjct: 1326 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 1385
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA A+L A EG Q HA + L D +LG+++++ Y+K G + +A VF RM
Sbjct: 1386 SASANLDALIEGKQGHA-IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM----- 1439
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
LE++VV+WN LI+ Y Q+ + +AL + L++ E
Sbjct: 1440 --------------------------LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSE 1473
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ T ++L+A A ++++LG++ H + ++ L ESD+ V NS+IDMY KC
Sbjct: 1474 NLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL------ESDVVVANSIIDMYAKC 1527
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++D ++F++ ERD V WN ++ AQ G EAL LF +M P+ ++ V+
Sbjct: 1528 ERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI 1587
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---M 556
G V E + FS M + G P +T ++ L ++G EA + M +
Sbjct: 1588 LGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGI 1646
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL-LSNMYAELGRWGEVVR 615
+P S+L AC ++ G + + E S P L +MYA+ G E +
Sbjct: 1647 RPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKK 1706
Query: 616 VRKLMRKR 623
V +M +
Sbjct: 1707 VFHMMSSK 1714
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 225/477 (47%), Gaps = 54/477 (11%)
Query: 104 ASRLFASMPERDQC------SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
AS A + E+D+ S+ +S + E++ +M E+F + +G
Sbjct: 1121 ASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGEL 1180
Query: 158 LSACAGSVDFKMGTQVHALLSKS--RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
L C G Q+HA + K+ ++ + Y+ + L+ Y KC A R+F +R R
Sbjct: 1181 LQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVR 1240
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ SW +++ + G + DAL F+ M +G+ PD L +V+ AC SL G +H
Sbjct: 1241 NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVH 1300
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + + ++LVDMY KCG L +AR VFD M +NVV+ SM
Sbjct: 1301 GYVLKM-GFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSM---------- 1349
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
I GY QNG N+EA+ +F ++ E + PT T + L+A
Sbjct: 1350 ---------------------IVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSAS 1388
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
ANL L G+Q H + L+ + D +G+S+I+ Y K G +ED +F M+E+
Sbjct: 1389 ANLDALIEGKQG------HAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK 1442
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA---CSHAGLVEEGR 512
D V+WN +I Q+ +AL + M + D VT+ +L A S+ L +EG
Sbjct: 1443 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 1502
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
Y + E + ++D+ + +D+A+ + ++ + D V+W +LLAA
Sbjct: 1503 CYCIRRNLESDVVVANS----IIDMYAKCERIDDARKVFDST-TERDLVLWNTLLAA 1554
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 329 YAKASSVKSARLMFTKMLERN------VVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+A S K A K+ E++ S+ I+ ++G +E++ L ++ E
Sbjct: 1112 FASVKSSKFASTRLAKLQEKDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQ 1171
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
+G LL C L G+Q H ++K+G F E +V L+ Y KC
Sbjct: 1172 IGPEIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNE----YVETKLVVFYAKCDFP 1227
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
E R+F + R+ SW A++ + G+ +AL F +M G PD+ + VL AC
Sbjct: 1228 EVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKAC 1287
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
L+ G+ + K G + +VD+ G+ G L++A+ + ++M ++ + V
Sbjct: 1288 GSLQLIGLGKGVHGYVLK-MGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM-VEKNVVT 1345
Query: 563 WGSLLAA 569
W S++
Sbjct: 1346 WNSMIVG 1352
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/702 (36%), Positives = 380/702 (54%), Gaps = 81/702 (11%)
Query: 14 LAFLDSSPFAKLLDSCLRSK--SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
LA LDS L +CL S S+S TR+ HA I+K+ ++ + +L+ YA C
Sbjct: 8 LALLDSVQHTIL--NCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A V D + NVF S+++++ F++ +
Sbjct: 66 DATLVLDLVPEPNVF-------------------------------SFSTLIYAFSKFHQ 94
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
F AL F +M + SA+ ACAG K QVH + S S + SD ++ S+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA------------------ 233
L+ MY KC ++ A RVFD M E ++VSW++L+ Y + G
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 234 -----------------SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
S+A+ +F+ M G EPD T++SV+ A L G+ IH
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+++ + L +D + +AL+DMY KC +E VFD+M +V S + + G ++ V+
Sbjct: 275 YVIK-QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 337 SARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
S+ +F ++ +E NVVSW ++IA +QNG + EAL LFR ++ V P T LL
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC N+A L G+ AH ++ G+ +D++VG++LIDMY KCG ++ F+ +
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGI------STDVYVGSALIDMYAKCGRIQASRICFDGI 447
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
++ V WNA+I G A +G EA+ +F M G+KPD ++ VL ACS +GL EEG
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF+SMS ++G+ +HY CMV LL RAG L++A +I MP+ PDA +WG+LL++C+V
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRV 567
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H N+ LGE A+KL E+EPSN G Y+LLSN+YA G W EV RVR +M+ +G+ K PGCS
Sbjct: 568 HNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCS 627
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
WIE+ V++ + DK HP +I L L+ EMK++GY P
Sbjct: 628 WIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFP 669
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/664 (37%), Positives = 363/664 (54%), Gaps = 69/664 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L++C + + +VH +IK + S+ F N L+D+YAK GC A VF ++
Sbjct: 191 LSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI- 249
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P+ D SWN++++G H++ AL K
Sbjct: 250 ------------------------------PKPDIVSWNAVIAGCVLHEKNDLALKLLGK 279
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S A S ++ SAL ACA K+G Q+H+ L K D ++G LIDMY KCG
Sbjct: 280 MGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGL 339
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VFD M ++++ WNS+I+ Y G +A+ +F M G+E ++ TL++++ +
Sbjct: 340 LQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A A Q+H ++ + D + N+L+D Y KC L +A VF+ P ++V+
Sbjct: 400 TAGSQANGFCEQVHTISIK-SGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVA 458
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
TSM I Y+Q G EEAL ++ ++ +
Sbjct: 459 YTSM-------------------------------ITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + F +L NACANL+ + G+Q H HV+K GL SD+F GNSL++MY KCGS
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLL------SDVFAGNSLVNMYAKCGS 541
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++D IF + R VSW+AMI G AQ+G+G +AL LF +ML G P+H+T++ VL A
Sbjct: 542 IDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSA 601
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGLV E R++F M K G+ P ++HY CMVD+LGR G LDEA L++ MP Q A
Sbjct: 602 CNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAA 661
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++H+NI LG + A+ LL +EP SG ++LL+N+YA G W V +VR+ M+
Sbjct: 662 VWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMK 721
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEA 681
V K+PG SWIE+ V F+V D+ HP +KEIY+ L L + GYVP D
Sbjct: 722 NSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLH 781
Query: 682 YEEQ 685
EQ
Sbjct: 782 DVEQ 785
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/566 (28%), Positives = 276/566 (48%), Gaps = 62/566 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ KLL SK VS +HARII+ +NRL+++Y+KC C ARK+ S
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGLLGL---RNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFA-----QHDRF 132
++ +W+++I+G ++ G ++A + M + ++ +++S++ G + + +
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+ +M S + +E+S + L+ACAG D G +VH L K Y SD + +AL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLI---TCYEQNGPASDALEVFVRMMASGIE 249
+DMY K G A VF + + +IVSWN++I +E+N AL++ +M + +
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKN---DLALKLLGKMGSYRVA 286
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P TL+S + ACA++ K G Q+H+ LM+ + + D +G L+DMY+KCG L +AR
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMD-MEPDSFVGVGLIDMYSKCGLLQDARM 345
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VFD MP ++V+ S++SGY+ G + EA
Sbjct: 346 VFDLMPXKDVIVWNSIISGYSNC-------------------------------GYDIEA 374
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+ LF + +E + T +L + A Q HT +K SG + D +V
Sbjct: 375 MSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIK------SGYQYDGYVA 428
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NSL+D Y KC +ED ++FE D V++ +MI +Q G G EAL ++ +M K
Sbjct: 429 NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEA 547
PD + AC++ E+G++ + K L D + +V++ + G +D+A
Sbjct: 489 PDAFIFSSLFNACANLSAYEQGKQIHVHVLK---CGLLSDVFAGNSLVNMYAKCGSIDDA 545
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + V W +++ H
Sbjct: 546 SCIFNEISWR-GIVSWSAMIGGLAQH 570
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 225/525 (42%), Gaps = 127/525 (24%)
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF------------ 240
+++Y KC AR++ E ++VSW++LI+ Y QNG +AL +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 241 ----------------------------VRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
M+++GI P+E +L++V++ACA L G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
++H L++ +D NAL+DMYAK G A VF +P
Sbjct: 209 KVHGYLIKL-GYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP----------------- 250
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+ ++VSWNA+IAG + +N+ AL L + V P+ +T + L
Sbjct: 251 --------------KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSAL 296
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
ACA + ++LGRQ H+ ++K + E D FVG LIDMY KCG ++D +F+ M
Sbjct: 297 KACAAIGLVKLGRQLHSALMKMDM------EPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL-----------CA 501
+D + WN++I G + GY EA+ LF M G + + T+ +L C
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 502 CSHAGLVEEGRKY-----------------FSSMSKEHGLAPLKD--HYTCMVDLLGRAG 542
H ++ G +Y +K + P +D YT M+ + G
Sbjct: 411 QVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYG 470
Query: 543 CLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL------EIEPSN 593
+EA + M ++PDA I+ SL AC G+ + +L ++ N
Sbjct: 471 LGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
S L NMYA+ G + + + RG+V SW ++G
Sbjct: 531 S-----LVNMYAKCGSIDDASCIFNEISWRGIV-----SWSAMIG 565
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ + + +L S S++ +VH IKS + + ++ N L+D Y KC L A KV
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ +++ + S+IT ++G ++A +++ M +RD + D F
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD-----------IKPDAF---- 492
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F S +ACA ++ G Q+H + K SDV+ G++L++MY
Sbjct: 493 ----------------IFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMY 536
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A +F+ + R IVSW+++I Q+G AL++F +M+ +GI P+ +TL
Sbjct: 537 AKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLV 596
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC E + + + + +VD+ + G+L+EA + MP
Sbjct: 597 SVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPF 656
Query: 317 R 317
+
Sbjct: 657 Q 657
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/642 (36%), Positives = 362/642 (56%), Gaps = 54/642 (8%)
Query: 42 HARIIKSQF-------ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
H RI +QF A+ N + C C YG ++ N+ +T
Sbjct: 83 HTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFES--------DILISNAFVTM 134
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+K +++ + F +M + S N+++SGF + + +++ E F + Y+F
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
S L CA D G +H + KS + D ++ ++L+++Y KCG + A +VF + E
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
R++VSW +LIT + G S L +F +M+A G P+ T S++ +C+SL+ G Q+
Sbjct: 255 RDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
HA++++ ND V G ALVDMYA K
Sbjct: 314 HAQIVKNSLDGNDFV-GTALVDMYA-------------------------------KNRF 341
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
++ A +F ++++R++ +W ++AGY Q+G+ E+A+ F ++RE V P +T + L+
Sbjct: 342 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
C+ +A L GRQ H+ +K +G+ D+FV ++L+DMY KCG VED +F+ +V
Sbjct: 402 CSRIATLDSGRQLHSMAIK------AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS 455
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
RD VSWN +I G +Q+G G +AL F+ ML G PD VT IGVL ACSH GL+EEG+K+
Sbjct: 456 RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKH 515
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F+S+SK +G+ P +HY CMVD+LGRAG E ++ IE M + + +IW ++L ACK+H
Sbjct: 516 FNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHG 575
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
NI GE A KL E+EP Y+LLSNM+A G W +V VR LM RGV K+PGCSW+
Sbjct: 576 NIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 635
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
E+ G V+VF+ D HP +EI+L L+ L +++ VGY PN
Sbjct: 636 EVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNT 677
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 214/451 (47%), Gaps = 70/451 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C +++ + +H ++IKS + + N L++VYAKCG A KVF ++
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +W ++ITG + G + L F +
Sbjct: 254 ERDVVSWTALITGFVAEG--------------------------------YGSGLRIFNQ 281
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E F + Y+F S L +C+ D +G QVHA + K+ + ++G+AL+DMY K
Sbjct: 282 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 341
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +F+ + +R++ +W ++ Y Q+G A++ F++M G++P+E TLAS +S
Sbjct: 342 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ +A G Q+H+ ++ + D+ + +ALVDMYAKCG + +A VFD + R+ VS
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVS 460
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++ G Y+Q+G+ +AL F + E
Sbjct: 461 WNTIICG-------------------------------YSQHGQGGKALKAFEAMLDEGT 489
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF +L+AC+++ ++ G++ + K + G I ++D+ + G
Sbjct: 490 VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK-----IYGITPTIEHYACMVDILGRAGK 544
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ E M + + + W ++ C +G
Sbjct: 545 FHEVESFIEEMKLTSNVLIWETVLGACKMHG 575
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 210/464 (45%), Gaps = 78/464 (16%)
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K+ D ++ S+L+++Y KC + CAR+V + M +++ WN ++ P +A++
Sbjct: 17 KNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQ 76
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M + I ++ AS++SA ASL G IHA + + +D+++ NA V MY
Sbjct: 77 LFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDILISNAFVTMY 135
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVS-- 352
K + F M I N+ S +++SG+ + + ++L E N+ +
Sbjct: 136 MKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFI 195
Query: 353 ---------------------------------WNALIAGYTQNGENEEA---------- 369
WN+L+ Y + G A
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 255
Query: 370 --------------------LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
L +F + E P YTF ++L +C++L+D+ LG+Q H
Sbjct: 256 DVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 315
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+VK+ L + + FVG +L+DMY K +ED IF +++RD +W ++ G AQ
Sbjct: 316 QIVKNSL------DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 369
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G G +A+ F +M G KP+ T+ L CS ++ GR+ SM+ + G +
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMF 428
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ +VD+ + GC+++A+ + + + + D V W +++ H
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQH 471
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/617 (38%), Positives = 365/617 (59%), Gaps = 25/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y + AR +FDKM +K++F+WN ++TG + + DA LF SMPE+D
Sbjct: 68 NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+M+SG+ + EA F +M +N S+ L+A S + + L
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEARR----L 179
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+S+ ++ + L+ Y K + AR++FD + R+++SWN++I+ Y Q+G S A
Sbjct: 180 FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQAR 239
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F +E + V + A + A+ ++G+ AR + E + + N ++
Sbjct: 240 RLF----------EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIA 289
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
YA+ +++ R +F+ MP N+ S M+SGY + + AR +F M +R+ VSW A+
Sbjct: 290 GYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAI 349
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IAGY QNG EEA+ + +KR+ TF L+ACA++A L+LG+Q H VV+
Sbjct: 350 IAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVR--- 406
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+G E VGN+L+ MY KCG +++ +F+ + +D VSWN M+ G A++G+G +A
Sbjct: 407 ---TGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQA 463
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L +F+ M+ G KPD +TM+GVL ACSH GL + G +YF SM+K++G+ P HY CM+D
Sbjct: 464 LTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMID 523
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAGCL+EA+ LI MP +PDA WG+LL A ++H N+ LGE A+ + ++EP NSG
Sbjct: 524 LLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGM 583
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW +V ++R MR+ GV K PG SW+E+ ++ F V D HP I
Sbjct: 584 YVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRI 643
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L +MK GYV
Sbjct: 644 YAFLEELDLKMKHEGYV 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 211/464 (45%), Gaps = 62/464 (13%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ + + +S + LL + +RS + + RR + +S+ E+ N L+ Y K
Sbjct: 146 RDVFDRMPHKNSISWNGLLAAYVRSGRLEEARR----LFESKSDWELISCNCLMGGYVKR 201
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
L AR++FD++ +++ +WN++I+G + G + A RLF P RD +W +MV +
Sbjct: 202 NMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYV 261
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q EA F +M + E S+ ++ A MG ++ + S
Sbjct: 262 QDGMLDEARRVFDEMPQKR----EMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGS--- 314
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +I Y + G ++ AR +FD M +R+ VSW ++I Y QNG +A+ + V M G
Sbjct: 315 -WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ T +SACA +AA + G Q+H +++R + LV GNALV MY KCG ++EA
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLV-GNALVGMYCKCGCIDEA 432
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF + +++VS +M++GYA+ +G
Sbjct: 433 YDVFQGVQHKDIVSWNTMLAGYAR-------------------------------HGFGR 461
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI- 426
+AL +F + V P T +L+AC +HT + G + D
Sbjct: 462 QALTVFESMITAGVKPDEITMVGVLSAC-----------SHTGLTDRGTEYFHSMNKDYG 510
Query: 427 FVGNS-----LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
NS +ID+ + G +E+ + M E D +W A++
Sbjct: 511 ITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALL 554
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 186/432 (43%), Gaps = 76/432 (17%)
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM----------MAS 246
G C C VFD M RN VS+N++I+ Y +N S A ++F +M M +
Sbjct: 47 GHCDLALC---VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLT 103
Query: 247 GIEP-----------DEVTLASVVSACASLAAFKEG------------------------ 271
G D + VVS A L+ +
Sbjct: 104 GYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGL 163
Query: 272 LQIHARLMRCEKLRN--------DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L + R R E+ R +L+ N L+ Y K L +AR +FD++P+R+++S
Sbjct: 164 LAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWN 223
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL--KRESV 381
+M+SGYA+ + AR +F + R+V +W A++ Y Q+G +EA +F + KRE
Sbjct: 224 TMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKRE-- 281
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
++ ++ A + +GR+ F +I N +I Y + G
Sbjct: 282 ----MSYNVMIAGYAQYKRMDMGREL----------FEEMPFPNIGSWNIMISGYCQNGD 327
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ +F+ M +RD VSW A+I G AQNG EA+ + +M GE + T L A
Sbjct: 328 LAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSA 387
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ +E G++ + + G +V + + GC+DEA + + + D V
Sbjct: 388 CADIAALELGKQVHGQVVRT-GYEKGCLVGNALVGMYCKCGCIDEAYDVFQGV-QHKDIV 445
Query: 562 IWGSLLAACKVH 573
W ++LA H
Sbjct: 446 SWNTMLAGYARH 457
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 167/372 (44%), Gaps = 80/372 (21%)
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS--------------------------- 327
+ + + G + A CVFD MP+RN VS +M+S
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99
Query: 328 ----GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
GYA+ ++ AR++F M E++VVSWNA+++GY ++G +EA +F R+ + S+
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI- 158
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
++ LL A L+ R+ F S + ++ N L+ Y+K +
Sbjct: 159 ----SWNGLLAAYVRSGRLEEARRL----------FESKSDWELISCNCLMGGYVKRNML 204
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP--DHVTMIGVLC 500
D ++F+ + RD +SWN MI G AQ+G ++A LF+ E P D T ++
Sbjct: 205 GDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE------ESPVRDVFTWTAMVY 258
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
A G+++E R+ F M ++ ++ Y M+ + +D + L E MP P+
Sbjct: 259 AYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNI 312
Query: 561 VIWGSLLAACKVHRNIMLGEYV-------AKKLLEIEPS-NSGPYVLLSNMYAELGRWGE 612
W NIM+ Y A+ L ++ P +S + + YA+ G + E
Sbjct: 313 GSW-----------NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEE 361
Query: 613 VVRVRKLMRKRG 624
+ + M++ G
Sbjct: 362 AMNMLVEMKRDG 373
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 61/351 (17%)
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V T +S + + A +F M RN VS+NA+I+GY +N + A LF +
Sbjct: 32 HTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP 91
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + +++ +L A L+ R + F S E D+ N+++ Y+
Sbjct: 92 HKDL----FSWNLMLTGYARNRRLRDAR----------MLFDSMPEKDVVSWNAMLSGYV 137
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF----------------- 480
+ G V++ +F+ M ++ +SWN ++ ++G EA LF
Sbjct: 138 RSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGG 197
Query: 481 ---KKML-----LCGEKP--DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD- 529
+ ML L + P D ++ ++ + G + + R+ F +P++D
Sbjct: 198 YVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE-------SPVRDV 250
Query: 530 -HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+T MV + G LDEA+ + + MP Q + + ++A ++ + +G ++L E
Sbjct: 251 FTWTAMVYAYVQDGMLDEARRVFDEMP-QKREMSYNVMIAGYAQYKRMDMG----RELFE 305
Query: 589 IEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
P N G + ++ + Y + G + + +M +R V SW I+
Sbjct: 306 EMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSV-----SWAAIIA 351
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 354/595 (59%), Gaps = 39/595 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N ++ +++T ++ G +D A + F + +RD +N++++ AQH EA + +
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYR 320
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S+ AL+ ++ S L+AC+ S + G +H+ +S+ +SSDV +G+ALI MY +CG
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +F M +R+++SWN++I Y + +A+ ++ +M + G++P VT ++SA
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+ +A+ +G IH ++R ++++ L NAL++MY +CG L EA+ VF+
Sbjct: 441 CANSSAYADGKMIHEDILR-SGIKSNGHLANALMNMYRRCGSLMEAQNVFE--------- 490
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
R+V+SWN++IAG+ Q+G E A LF+ ++ E +
Sbjct: 491 ----------------------GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEEL 528
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + TF ++L+ C N L+LG+Q H + + GL+ D+ +GN+LI+MY++CGS
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL------DVNLGNALINMYIRCGS 582
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVTMIGVLC 500
++D +F ++ RD +SW AMI GCA G +A+ LF +M G PD T +L
Sbjct: 583 LQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILS 642
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+HAGLV EG + FSSM E+G+ P +HY C+V LLGRA EA+TLI MP PDA
Sbjct: 643 ACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDA 702
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+W +LL AC++H NI L E+ A L++ N Y+LLSN+YA GRW +V ++R++M
Sbjct: 703 AVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVM 762
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
RG+ K+PG SWIE+ ++ F+ D+ HP EIY LK L+ EM+ GY P+
Sbjct: 763 EGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPD 817
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 292/583 (50%), Gaps = 83/583 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + + LL +C R + + + +R+HA+++++ +IF+ N LI++Y KC R V
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKC------RSVL 79
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D A ++F MP RD SWNS++S +AQ +A
Sbjct: 80 D-------------------------AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQ 114
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + F ++ ++ S L+AC + + G ++H+ + K+ Y D + ++L+ MYG
Sbjct: 115 LFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYG 174
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR+VF G+ R++VS+N+++ Y Q + L +F +M + GI PD+VT +
Sbjct: 175 KCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYIN 234
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A + + EG +IH +L E L +D+ +G ALV M +CG ++ A+ F
Sbjct: 235 LLDAFTTPSMLDEGKRIH-KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF------ 287
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +R+VV +NALIA Q+G N EA + ++
Sbjct: 288 -------------------------KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMR 322
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V T+ ++LNAC+ L+ G+ H+H+ + G SD+ +GN+LI MY
Sbjct: 323 SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISE------DGHSSDVQIGNALISMYA 376
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG + +F TM +RD +SWNA+I G A+ EA+ L+K+M G KP VT +
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+++ +G+ + + G+ ++++ R G L EA+ + E +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 558 PDAVIWGSLLAACKVHRNIMLGEY-VAKKLL------EIEPSN 593
D + W S++A H G Y A KL E+EP N
Sbjct: 496 -DVISWNSMIAGHAQH-----GSYETAYKLFQEMQNEELEPDN 532
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 204/417 (48%), Gaps = 75/417 (17%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D L+ + + +L++C SK++ + +H+ I + +S++ I N LI +YA+CG L
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR++F M +++ +WN+II +G+A+ +
Sbjct: 384 ARELFYTMPKRDLISWNAII-------------------------------AGYARREDR 412
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA+ + +M SE +F LSACA S + G +H + +S S+ ++ +AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
++MY +CG + A+ VF+G + R+++SWNS+I + Q+G A ++F M +EPD
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T ASV+S C + A + G QIH R+ L+ D+ LGNAL++MY +CG L +AR VF
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ R+V+S W A+I G GE+ +A+ L
Sbjct: 592 SLQHRDVMS-------------------------------WTAMIGGCADQGEDMKAIEL 620
Query: 373 FRLLKRESVCPTH-YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
F ++ E P TF ++L+AC H +V G + S ES+ V
Sbjct: 621 FWQMQNEGFRPPDGSTFTSILSAC-----------NHAGLVLEGYQIFSSMESEYGV 666
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 15/276 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ FA +L C +++ +++H RI +S ++ + N LI++Y +CG L AR VF
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF 590
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER-----DQCSWNSMVSGFAQHDRF 132
+ +++V +W ++I G G A LF M D ++ S++S
Sbjct: 591 HSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLV 650
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
E F M SE L L G + + L+++ + D + L
Sbjct: 651 LEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRA--RRFQEAETLINQMPFPPDAAVWETL 708
Query: 193 IDMYGKCGRVSCARRVFDG---MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI- 248
+ G ++ A + + RN + L Y G D ++ M GI
Sbjct: 709 LGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIR 768
Query: 249 -EPDE--VTLASVVSA-CASLAAFKEGLQIHARLMR 280
EP + + +++ A+ + E +I+A L R
Sbjct: 769 KEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKR 804
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/702 (36%), Positives = 380/702 (54%), Gaps = 81/702 (11%)
Query: 14 LAFLDSSPFAKLLDSCLRSK--SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
LA LDS + +CL S S+S TR+ HA I+K+ ++ + +L+ YA C
Sbjct: 8 LALLDS--VQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFA 65
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A V D + NVF S+++++ F++ +
Sbjct: 66 DATLVLDLVPEPNVF-------------------------------SFSTLIYAFSKFHQ 94
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
F AL F +M + SA+ ACAG K QVH + S S + SD ++ S+
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA------------------ 233
L+ MY KC ++ A RVFD M E ++VSW++L+ Y + G
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 234 -----------------SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
S+A+ +F+ M G EPD T++SV+ A L G+ IH
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+++ + L +D + +AL+DMY KC +E VFD+M +V S + + G ++ V+
Sbjct: 275 YVIK-QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333
Query: 337 SARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
S+ +F ++ +E NVVSW ++IA +QNG + EAL LFR ++ V P T LL
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC N+A L G+ AH ++ G+ +D++VG++LIDMY KCG ++ F+ +
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGI------STDVYVGSALIDMYAKCGRIQASRICFDGI 447
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
++ V WNA+I G A +G EA+ +F M G+KPD ++ VL ACS +GL EEG
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF+SMS ++G+ +HY CMV LL RAG L++A +I MP+ PDA +WG+LL++C+V
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRV 567
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H N+ LGE A+KL E+EPSN G Y+LLSN+YA G W EV RVR +M+ +G+ K PGCS
Sbjct: 568 HNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCS 627
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
WIE+ V++ + DK HP +I L L+ EMK++GY P
Sbjct: 628 WIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFP 669
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/731 (34%), Positives = 380/731 (51%), Gaps = 108/731 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D + +L C KS+ D RRV + I S + + +L+ +Y KCG L R V
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK+S +F WN M+S ++ + E++
Sbjct: 208 FDKLSESKIFL-------------------------------WNLMISEYSGSGNYGESI 236
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + Y+F S L A + G QVH L+ K ++S + ++LI Y
Sbjct: 237 NLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY 296
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+V CA+++FD + +R+++SWNS+I+ Y +NG +E+F++M+ G++ D T+
Sbjct: 297 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 356
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV------ 310
+V ACA++ G +H+ ++ L ++ N L+DMY+KCG LN A V
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 311 -------------------------FDRMPIRNVVSETSMVSG----------------- 328
FD M R VV + V+
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 329 ----------------------YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
YAK S+K A +F+ M +++V+SWN +I GYT+N
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EAL LF ++RES P T +L ACA+LA L GR+ H + +++G D
Sbjct: 537 NEALTLFAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGY------SEDK 589
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+V N+++DMY+KCG + +F+ + +D VSW MI G +GYG+EA+ F +M +
Sbjct: 590 YVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMT 649
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G +PD V+ I +L ACSH+GL++EG K F+ M KE + P +HY CMVDLL R G L +
Sbjct: 650 GIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVK 709
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A I+AMP++PDA IWG+LL C++H ++ L E VA+++ E+EP N+G YVLL+N+YAE
Sbjct: 710 AHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAE 769
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
+W EV ++RK + +RG+ K PGCSWIEI G +N+F+ D P K+I L+LK L +
Sbjct: 770 AEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSK 829
Query: 667 MKRVGYVPNAS 677
MK GY P +
Sbjct: 830 MKEEGYSPKTA 840
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 231/519 (44%), Gaps = 83/519 (15%)
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
F + A+ + NF L Y S L CA + G +V +++ S D
Sbjct: 127 FCEVGDLKNAMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRSIIESSGVMID 184
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+G L+ MY KCG + R VFD + E I WN +I+ Y +G +++ +F +M+
Sbjct: 185 GILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE 244
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
GI+P+ T +S++ A++A +EG Q+H + + + V+ N+L+ Y K+
Sbjct: 245 LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVV-NSLISFYFVGRKVR 303
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM-------------------- 345
A+ +FD + R+V+S SM+SGY K +F KM
Sbjct: 304 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363
Query: 346 --------------------LERNVVSWNALIAGYTQNGENEEALGLFRLL--------- 376
L+R V N L+ Y++ G+ A+ +F +
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWT 423
Query: 377 ----------------------KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
K V P Y ++LNACA +L+ G+ H ++ ++
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN 483
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
L E++ FV N+L DMY KCGS++D +F M ++D +SWN MI G +N
Sbjct: 484 NL------ETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPN 537
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
EAL LF +M KPD T+ +L AC+ +++GR+ + +G + K +
Sbjct: 538 EALTLFAEMQR-ESKPDGTTVACILPACASLAALDKGRE-IHGYALRNGYSEDKYVTNAV 595
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
VD+ + G L A++L + +P D V W ++A +H
Sbjct: 596 VDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMH 633
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/655 (37%), Positives = 367/655 (56%), Gaps = 42/655 (6%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYG 72
++ S+P LL++C KS S +++ A++I + + F +RLI A + L
Sbjct: 49 TYVLSNPLLSLLENC---KSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDY 105
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
K+ + + N NVF+WN++I G ++ L+ M R C ++
Sbjct: 106 CIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDN----------- 154
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
Y++ CA V MG ++ + K + D+Y+ + +
Sbjct: 155 -------------------YTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGI 195
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I M G A +VFD R++VSWNSLI Y + +A+ ++ +M+ ++PDE
Sbjct: 196 IHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDE 255
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
VT+ VVSACA L + K G +IH R + L + L NAL+DMY KCG L + +FD
Sbjct: 256 VTMIGVVSACAQLESLKLGREIH-RYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFD 314
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M + VVS T+M+ GYAK + A +F M E+NVV+WNA+I Q + EAL L
Sbjct: 315 NMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALEL 374
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
FR ++ ++ P T + L+AC+ L L G H ++ KH L D+ +G +L
Sbjct: 375 FREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSL------DVALGTAL 428
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG++ ++F M R+ ++W A+I G A G +A+ F KM+ G PD
Sbjct: 429 IDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDE 488
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +GVL AC H GLVEEGRKYF M L+P HY+CMV+LLGRAG L+EA+ LI+
Sbjct: 489 ITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIK 548
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM+ DA++WG+L AC +HRN+++GE A KLL+++P +SG YVLL+NMY E G+W E
Sbjct: 549 TMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEE 608
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+RK+M +RGV K PG S IE+ G +N F+V+DK HP +++IY ++ + +
Sbjct: 609 AQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSEQIYECFNLINKTI 663
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 159/310 (51%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q++ + D ++ +C + +S+ R +H I +S +I + N L+D+Y KC
Sbjct: 244 QQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKC 303
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L + +FD M K V +W ++I G K G +D A +LF MPE++ +WN+M+
Sbjct: 304 GDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCV 363
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q + EAL F +M N + + LSAC+ G H + K S DV
Sbjct: 364 QANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVA 423
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+ALIDMY KCG ++ A +VF+ M RN ++W ++I G +DA+ F +M+ SG
Sbjct: 424 LGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSG 483
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PDE+T V++AC +EG + ++ L + +V++ + G L EA
Sbjct: 484 LMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEA 543
Query: 308 RCVFDRMPIR 317
+ MP+
Sbjct: 544 EELIKTMPME 553
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 372/676 (55%), Gaps = 73/676 (10%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLID 62
QR +V D A S LL +C + K + RR+H + S QF ++ + R+I
Sbjct: 91 QRESDDVVLDSA-QRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIIT 149
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y+ CG +R VFDK+ KN+F WN++
Sbjct: 150 MYSMCGSPSDSRMVFDKLRRKNLF-------------------------------QWNAI 178
Query: 123 VSGFAQHDRFSEALGYFVKMHS-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
VS + +++ F +A+ F ++ S ++ + ACAG +D +G +H + +K
Sbjct: 179 VSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMD 238
Query: 182 YSSDVYMGSALIDMYGKCGRVSCA-RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
SDV++G+ALI MYGKCG V A +RVFD M + + SWN+L+ Y QN AL+++
Sbjct: 239 LVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 298
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
++M SG++PD T+ S++ AC+ + + G +IH +R L D +G +L+ +Y
Sbjct: 299 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR-NGLAVDPFIGISLLSLYIC 357
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CGK A+ +FD M R++VSWN +IAGY
Sbjct: 358 CGKPFAAQVLFDGME-------------------------------HRSLVSWNVMIAGY 386
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+QNG +EA+ LFR + + + P + AC+ L+ L+LG++ H +K L
Sbjct: 387 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHL---- 442
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
DIFV +S+IDMY K G + RIF+ + E+D SWN +I G +G G EAL LF
Sbjct: 443 --TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 500
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+KML G KPD T G+L ACSHAGLVE+G +YF+ M H + P +HYTC+VD+LGR
Sbjct: 501 EKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGR 560
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
AG +D+A LIE MP PD+ IW SLL++C++H N+ LGE VA KLLE+EP YVL+
Sbjct: 561 AGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLI 620
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SN++A G+W +V RVR M+ G+ K GCSWIE+ G V+ F++ D+ P +E+
Sbjct: 621 SNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETW 680
Query: 661 KMLTREMKRVGYVPNA 676
+ L ++ +GY P+
Sbjct: 681 RRLEVKISSIGYTPDT 696
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 245/505 (48%), Gaps = 56/505 (11%)
Query: 82 NKNVFTWNSIITGL----LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KN ++ +SI T + L S FA+ Q S + + EAL
Sbjct: 29 SKNKYSLHSIFTPIASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEALD 88
Query: 138 YFVKMHSENFALSEY----SFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSAL 192
F++ S++ L + G L AC D ++G ++H ++S S ++ +D + + +
Sbjct: 89 -FLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRI 147
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPD 251
I MY CG S +R VFD +R +N+ WN++++ Y +N DA+ +F +++ + +PD
Sbjct: 148 ITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPD 207
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA-RCV 310
TL V+ ACA L G IH + + L +D+ +GNAL+ MY KCG + EA + V
Sbjct: 208 NFTLPCVIKACAGLLDLGLGQIIHGMATKMD-LVSDVFVGNALIAMYGKCGLVEEAVKRV 266
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FD LM TK V SWNAL+ GY QN + +AL
Sbjct: 267 FD---------------------------LMDTK----TVSSWNALLCGYAQNSDPRKAL 295
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
L+ + + P +T G+LL AC+ + L G + H +++GL D F+G
Sbjct: 296 DLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAV------DPFIGI 349
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SL+ +Y+ CG +F+ M R VSWN MI G +QNG EA+ LF++ML G +P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAK 548
+ ++ V ACS + G++ K H +D + + ++D+ + GC+ ++
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAH---LTEDIFVSSSIIDMYAKGGCIGLSQ 466
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + + D W ++A +H
Sbjct: 467 RIFDRL-REKDVASWNVIIAGYGIH 490
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/734 (34%), Positives = 385/734 (52%), Gaps = 106/734 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L +C K + ++VH ++ S F ++F+ N L+ +YAKC
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFL---------- 209
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
D+ RLF +PER+ SWN++ S + Q D EA+G F +
Sbjct: 210 ---------------------DSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYE 248
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E+S S ++AC G D G +H L K Y D + +AL+DMY K G
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ A VF+ +++ +IVSWN++I + ALE+ +M SGI P+ TL+S + A
Sbjct: 309 LADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKA 368
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLRN-----------DLVLG 291
CA + + G Q+H+ LM+ C+ L + DL+
Sbjct: 369 CAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAW 428
Query: 292 NALVDMYAKCGKLNEARCVFDRM----------PIRNVVSET------------------ 323
NA++ Y++ + EA +F M + ++ T
Sbjct: 429 NAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVK 488
Query: 324 -----------SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
S++ Y K S V+ A +F + ++VS+ ++I Y Q G+ EEAL L
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKL 548
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F ++ + P + +LLNACANL+ + G+Q H H++K+G DIF GNSL
Sbjct: 549 FLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL------DIFAGNSL 602
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
++MY KCGS++D R F + ER VSW+AMI G AQ+G+G +AL LF +ML G P+H
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNH 662
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T++ VL AC+HAGLV E + YF SM + G P+++HY CM+DLLGRAG ++EA L+
Sbjct: 663 ITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVN 722
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP + +A +WG+LL A ++H+++ LG A+ L +EP SG +VLL+N+YA G+W
Sbjct: 723 KMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWEN 782
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V VR+LMR V K+PG SWIE+ V F+V D+ H ++EIY L L+ M + GY
Sbjct: 783 VAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGY 842
Query: 673 VPNASDDEAYEEQN 686
VP D EQ+
Sbjct: 843 VPMVEIDLHDVEQS 856
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 204/663 (30%), Positives = 316/663 (47%), Gaps = 126/663 (19%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S ++KLL C +KS+ ++HA I KS + + I+N LI++Y+KC ARK+ D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVD 115
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ S E D SW++++SG+AQ+ AL
Sbjct: 116 ESS-------------------------------EPDLVSWSALISGYAQNGLGGGALMA 144
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +MH +E++F S L AC+ D ++G QVH ++ S + DV++ + L+ MY K
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK 204
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C ++R+FD + ERN+VSWN+L +CY Q +A+ +F M+ SGI+P+E +L+S+
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
V+AC L G IH L++ D NALVDMYAK G L +A VF+
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVFE------ 317
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
K+ + ++VSWNA+IAG + +E+AL L +KR
Sbjct: 318 -------------------------KIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+CP +T + L ACA + +LGRQ H+ ++K + ESD+FV L+DMY K
Sbjct: 353 SGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDM------ESDLFVSVGLVDMYSK 406
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
C +ED F + E+D ++WNA+I G +Q EAL LF +M G + T+ +
Sbjct: 407 CDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTI 466
Query: 499 LCACSHAGLVEEGRKY--FSSMSKEHG----LAPLKDHY--------------------- 531
L + + +V R+ S S H + L D Y
Sbjct: 467 LKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL 526
Query: 532 ---TCMVDLLGRAGCLDEAKTL---IEAMPMQPDAVIWGSLLAAC----------KVHRN 575
T M+ + G +EA L ++ M ++PD + SLL AC ++H +
Sbjct: 527 VSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVH 586
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
I+ +V L+I NS L NMYA+ G + R + +RG+V SW
Sbjct: 587 ILKYGFV----LDIFAGNS-----LVNMYAKCGSIDDAGRAFSELTERGIV-----SWSA 632
Query: 636 ILG 638
++G
Sbjct: 633 MIG 635
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 213/426 (50%), Gaps = 44/426 (10%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
NF + S+ LS C + + G Q+HA ++KS S D + + LI++Y KC A
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYA 110
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R++ D E ++VSW++LI+ Y QNG AL F M G++ +E T +SV+ AC+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ G Q+H ++ D+ + N LV MYAKC + +++ +FD +P RNV
Sbjct: 171 KDLRIGKQVHG-VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV------ 223
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
VSWNAL + Y Q EA+GLF + + P
Sbjct: 224 -------------------------VSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNE 258
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
++ +++NAC L D G+ H +++K G + D F N+L+DMY K G + D
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW------DPFSANALVDMYAKVGDLADA 312
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+FE + + D VSWNA+I GC + + +AL L +M G P+ T+ L AC+
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGM 372
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
GL E GR+ SS+ K + D + +VD+ + L++A+ +P + D + W
Sbjct: 373 GLKELGRQLHSSLMK---MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAW 428
Query: 564 GSLLAA 569
++++
Sbjct: 429 NAIISG 434
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 39/371 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ + + +L S + V R+VH +KS F S+I++ N LID Y KC + A ++
Sbjct: 458 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 517
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ + ++ ++ S+IT ++G ++A +LF M + + + DRF +
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME-----------LKPDRFVCS- 565
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
S L+ACA F+ G Q+H + K + D++ G++L++MY
Sbjct: 566 -------------------SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMY 606
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A R F + ER IVSW+++I Q+G AL++F +M+ G+ P+ +TL
Sbjct: 607 AKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 666
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + ++D+ + GK+NEA + ++MP
Sbjct: 667 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPF 726
Query: 317 RNVVSETSMVSGYAKASS-----VKSARLMFTKMLERNVVSWNALIAG-YTQNGENEEAL 370
S + G A+ ++A ++F +LE + L+A Y G+ E
Sbjct: 727 EANASVWGALLGAARIHKDVELGRRAAEMLF--ILEPEKSGTHVLLANIYASAGKWENVA 784
Query: 371 GLFRLLKRESV 381
+ RL++ V
Sbjct: 785 EVRRLMRDSKV 795
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
LI Q ++ + + L+ + + PT ++ LL+ C L+ G Q H H+ K G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
L D + N LI++Y KC + ++ + E D VSW+A+I G AQNG G
Sbjct: 87 L------SDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGG 140
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACS 503
AL F +M L G K + T VL ACS
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACS 168
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/640 (39%), Positives = 356/640 (55%), Gaps = 73/640 (11%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
D R+VH IK+ ++F+ + L++ Y K GC++ AR
Sbjct: 130 DARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEAR---------------------- 167
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
+LF MPER+ SW +M+SG+A EALG F M L+E+ F S
Sbjct: 168 ---------KLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTS 218
Query: 157 ALSA--CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
LSA C VD G QVH ++ K+ V + +AL+ MY KCG ++ + +F+ +
Sbjct: 219 VLSALVCPEFVD--SGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSD 276
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+N ++W++LIT Y Q G + AL++F +M +G P E TL V+ AC+ +AA +EG Q
Sbjct: 277 KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQT 336
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H L++ + ALVDMYA K
Sbjct: 337 HGYLLK-SGYETQIYTATALVDMYA-------------------------------KFGF 364
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
AR F +LE ++V W ++IAGY QNG+NEEAL ++ ++ + P T ++L A
Sbjct: 365 TGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKA 424
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
C+NLA L+ G+Q H +K+GL G E I ++L MY KCGS+E+G IF M++
Sbjct: 425 CSNLAALEQGKQIHARTIKYGL----GPELSI--RSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
RD VSWNAMI G +QNG+G EAL LF++M L G KPDH+T + VL ACSH G+V+ G Y
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY 538
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F+ M E L P +HY CMVD+L RAG L+EAK IE+ + +W LL AC+ H
Sbjct: 539 FNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHC 598
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N LG Y +KL+E+ S YVLLS++Y +GR +VVRVR++M+ RGV K+ GCSWI
Sbjct: 599 NYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWI 658
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
E+ HV+VF+V D+ HP +EI + L + MK GY P
Sbjct: 659 ELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRP 698
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 268/550 (48%), Gaps = 71/550 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEI-FIQNRLIDVYAKCGCLYGARKVFDKM 80
F LL KS+ + +HA IIK + S ++ N LI YAKCG L+GA+ VF+ +
Sbjct: 10 FYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENL 69
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+KNV ++N +I GL G S S F L F
Sbjct: 70 KHKNVVSYNCLIHGLSHNG---------------------SKGSNF--------VLELFR 100
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKM-GTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M + N ++F +A A ++ QVH L K+ DV++GS+L++ Y K
Sbjct: 101 RMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKV 160
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR++FD M ERN+VSW ++I+ Y A +AL VF M +E SV+
Sbjct: 161 GCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVL 220
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA G Q+H +++ L VL NALV MYAKCG LN + +F+ +N
Sbjct: 221 SALVCPEFVDSGKQVHCVVVKNGVLEFVSVL-NALVTMYAKCGNLNYSLMLFEMCSDKNA 279
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ +++++GY++A G++ +AL LF +
Sbjct: 280 ITWSALITGYSQA-------------------------------GDSHKALKLFSKMHYA 308
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P+ +T +L AC+++A ++ G+Q H +++K SG E+ I+ +L+DMY K
Sbjct: 309 GFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLK------SGYETQIYTATALVDMYAKF 362
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G D + F+ ++E D V W ++I G QNG EAL ++ +M + P+ +TM VL
Sbjct: 363 GFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVL 422
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACS+ +E+G++ + K +GL P + + + + G L+E + M +Q D
Sbjct: 423 KACSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM-LQRD 480
Query: 560 AVIWGSLLAA 569
V W ++++
Sbjct: 481 IVSWNAMISG 490
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 193/388 (49%), Gaps = 63/388 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ F +L + + + V ++VH ++K+ + + N L+ +YAKCG L + +
Sbjct: 211 LNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLML 270
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ S+KN TW+++IT G++Q +AL
Sbjct: 271 FEMCSDKNAITWSALIT-------------------------------GYSQAGDSHKAL 299
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KMH F SE++ L AC+ + G Q H L KS Y + +Y +AL+DMY
Sbjct: 300 KLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMY 359
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G AR+ FD + E ++V W S+I Y QNG +AL ++ RM I P+E+T+A
Sbjct: 360 AKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMA 419
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC++LAA ++G QIHAR ++ L +L + +AL MYAKCG L E +F RM
Sbjct: 420 SVLKACSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++VS +M+S G +QNG EAL LF +
Sbjct: 479 RDIVSWNAMIS-------------------------------GLSQNGHGREALELFEEM 507
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLG 404
+ E P H TF +L+AC+++ ++ G
Sbjct: 508 RLEGTKPDHITFVTVLSACSHMGIVKRG 535
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 215/422 (50%), Gaps = 46/422 (10%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDG 211
SF + L A K G +HA + K Y SS Y+ + LI Y KCG + A+ VF+
Sbjct: 9 SFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFEN 68
Query: 212 MRERNIVSWNSLITCYEQNGPASD--ALEVFVRMMASGIEPDEVTLASVVSACA-SLAAF 268
++ +N+VS+N LI NG LE+F RM+A+ I PD T V +A A +L
Sbjct: 69 LKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCN 128
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ Q+H ++ + +D+ +G++LV+ Y K G + EAR +FDRMP RN+VS T+M+SG
Sbjct: 129 FDARQVHVLGIKTASI-DDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISG 187
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
YA K EALG+F L++ + F
Sbjct: 188 YASKQMAK-------------------------------EALGVFGLMRLVEGNLNEFVF 216
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHG-LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
++L+A + G+Q H VVK+G L F+S V N+L+ MY KCG++
Sbjct: 217 TSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVS-------VLNALVTMYAKCGNLNYSLM 269
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+FE +++ ++W+A+I G +Q G +AL LF KM G P T++GVL ACS
Sbjct: 270 LFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAA 329
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+EEG++ + K G T +VD+ + G +A+ + + ++PD V+W S++
Sbjct: 330 IEEGKQTHGYLLKS-GYETQIYTATALVDMYAKFGFTGDARKGFDFL-LEPDLVLWTSII 387
Query: 568 AA 569
A
Sbjct: 388 AG 389
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 42/323 (13%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P + +++ A + K+G +HA +++ L + L N L+ YAKCG L+ A+
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE- 368
VF+ + +N VVS+N LI G + NG
Sbjct: 65 VFENLKHKN-------------------------------VVSYNCLIHGLSHNGSKGSN 93
Query: 369 -ALGLFRLLKRESVCPTHYTFGNLLNACA-NLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L LFR + ++ P +TF + A A NL RQ H +K + D+
Sbjct: 94 FVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIK------TASIDDV 147
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FVG+SL++ Y K G V + ++F+ M ER+ VSW MI G A EALG+F M L
Sbjct: 148 FVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLV 207
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
+ VL A V+ G++ + K +G+ +V + + G L+
Sbjct: 208 EGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVK-NGVLEFVSVLNALVTMYAKCGNLNY 266
Query: 547 AKTLIEAMPMQPDAVIWGSLLAA 569
+ L E M +A+ W +L+
Sbjct: 267 SLMLFE-MCSDKNAITWSALITG 288
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A +L +C ++ +++HAR IK E+ I++ L +YAKCG L +F +M
Sbjct: 419 ASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ 478
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFSEALGY 138
+++ +WN++I+GL + G +A LF M + D ++ +++S + Y
Sbjct: 479 RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAY 538
Query: 139 FVKMHSE 145
F M E
Sbjct: 539 FNMMFDE 545
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/658 (36%), Positives = 366/658 (55%), Gaps = 69/658 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ ++++C S+ + R+VHA +I++ +
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVIRTGY------------------------------- 233
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K+VFT N+++ K G I A+ +F +PE D SWN+ +SG H AL ++
Sbjct: 234 DKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQ 293
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S + ++ S L ACAGS F +G Q+H + K+ SD Y+ L+DMY K G
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A++VFD + +R++V WN+LI+ ++AL +F RM G + + TLA+V+ +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
ASL A + Q+HA + L + V+ N L+D Y KC LN A VF++ ++++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVV-NGLIDSYWKCDCLNYAYRVFEKHGSYDIIA 472
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
TSM I +Q E+A+ LF + R+ +
Sbjct: 473 FTSM-------------------------------ITALSQCDHGEDAIKLFMEMLRKGL 501
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + +LLNACA+L+ + G+Q H H++K +F+S D+F GN+L+ Y KCGS
Sbjct: 502 DPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--QFMS----DVFAGNALVYTYAKCGS 555
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ED F + E+ VSW+AMI G AQ+G+G AL +F +M+ P+H+TM VLCA
Sbjct: 556 IEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCA 615
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGLV+E ++YF+SM + G+ ++HY CM+DLLGRAG LD+A L+ +MP Q +A
Sbjct: 616 CNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAA 675
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LLAA +VHR+ LG A+KL +EP SG +VLL+N YA G W +V +VRKLM+
Sbjct: 676 VWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMK 735
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
V K+P SW+E+ V+ F+V DK HP ++IY L L M + GYVPN D
Sbjct: 736 DSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVD 793
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 248/491 (50%), Gaps = 41/491 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++F N+++ +GF+D+A +F ER+ SWN ++S + ++DR S A+ F +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+E+ F ++AC GS D + G +VHA++ ++ Y DV+ +AL+DMY K G +
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF + E ++VSWN+ I+ +G ALE+ ++M +SG+ P+ TL+S++ AC
Sbjct: 254 RMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKAC 313
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A AF G QIH +++ +D + LVDMYAK G L++A+ VFD +P R++
Sbjct: 314 AGSGAFNLGRQIHGFMVKANA-DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDL--- 369
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
V WNALI+G + ++ EAL LF +++E
Sbjct: 370 ----------------------------VLWNALISGCSHGAQHAEALSLFCRMRKEGFD 401
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T +L + A+L + RQ H K G FL SD V N LID Y KC +
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLG--FL----SDSHVVNGLIDSYWKCDCL 455
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
R+FE D +++ +MI +Q +G +A+ LF +ML G PD + +L AC
Sbjct: 456 NYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ E+G++ + + K ++ + +V + G +++A +P + V
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDVFAG-NALVYTYAKCGSIEDADLAFSGLP-EKGVVS 573
Query: 563 WGSLLAACKVH 573
W +++ H
Sbjct: 574 WSAMIGGLAQH 584
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 281/606 (46%), Gaps = 88/606 (14%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL ++S+ +HA ++KS + +N L+ Y+KC AR+VFD+
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDE----- 62
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+P+ SW+S+V+ ++ + +ALG F M S
Sbjct: 63 --------------------------IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRS 96
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ +E+ L CA F GTQ+HAL + D+++ +AL+ MYG G V
Sbjct: 97 CSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDE 153
Query: 205 ARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR VFD ERN VSWN L++ Y +N S A++VF M+ G++P+E + VV+AC
Sbjct: 154 ARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACT 213
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ G ++HA ++R D+ NALVDMY+K G + A VF ++P
Sbjct: 214 GSRDLEAGRKVHAMVIR-TGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVP-------- 264
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
E +VVSWNA I+G +G ++ AL L +K + P
Sbjct: 265 -----------------------ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+T ++L ACA LGRQ H +VK + +SD ++ L+DMY K G ++
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVK------ANADSDNYIAFGLVDMYAKHGLLD 355
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
D ++F+ + +RD V WNA+I GC+ EAL LF +M G + T+ VL + +
Sbjct: 356 DAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTA 415
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ + R+ + K L L D + ++D + CL+ A + E D +
Sbjct: 416 SLEAISDTRQVHALAEK---LGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG-SYDII 471
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEI--EPSNSGPYVL--LSNMYAELGRWGEVVRVR 617
+ S++ A + GE K +E+ + + P+VL L N A L + + +V
Sbjct: 472 AFTSMITALSQCDH---GEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 618 KLMRKR 623
+ KR
Sbjct: 529 AHLIKR 534
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 200/420 (47%), Gaps = 48/420 (11%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ G L+ A + G +HA L KS + + L+ Y KC ARRVFD +
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ VSW+SL+T Y N DAL F M + + +E L VV CA A F G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVL-PVVLKCAPDAGF--GT 120
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA M L D+ + NALV MY G ++EAR VFD
Sbjct: 121 QLHALAM-ATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGC---------------- 163
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
ERN VSWN L++ Y +N A+ +F + V P + F ++
Sbjct: 164 --------------ERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
NAC DL+ GR+ H V++ +G + D+F N+L+DMY K G + +F +
Sbjct: 210 NACTGSRDLEAGRKVHAMVIR------TGYDKDVFTANALVDMYSKLGDIRMAAVVFGKV 263
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
E D VSWNA I GC +G+ AL L +M G P+ T+ +L AC+ +G GR
Sbjct: 264 PETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGR 323
Query: 513 KYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+ M K + + D+Y +VD+ + G LD+AK + + +P Q D V+W +L++ C
Sbjct: 324 QIHGFMVKANADS---DNYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGC 379
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 148/302 (49%), Gaps = 31/302 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + A +L S +++SDTR+VHA K F S+ + N LID Y KC CL A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+K + ++ + S+IT L + +DA +LF M +
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRK---------------------- 499
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ + F LS S L+ACA ++ G QVHA L K ++ SDV+ G+AL+ Y
Sbjct: 500 ----GLDPDPFVLS-----SLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTY 550
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A F G+ E+ +VSW+++I Q+G AL+VF RM+ I P+ +T+
Sbjct: 551 AKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMT 610
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + + ++D+ + GKL++A + + MP
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPF 670
Query: 317 RN 318
+
Sbjct: 671 QT 672
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/661 (37%), Positives = 365/661 (55%), Gaps = 72/661 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +CL S++D ++H ++K F ++++ LI +Y++ G + A KV
Sbjct: 149 DFYTFPPVLKACL---SLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKV- 204
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F MP RD SWN+M+SGF Q+ +EAL
Sbjct: 205 ------------------------------FVDMPVRDVGSWNAMISGFCQNGNVAEALR 234
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M +E + + S L CA S D G VH + K SDV++ +ALI+MY
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYS 294
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K GR+ A+RVFDGM R++VSWNS+I YEQN AL F M+ G+ PD +T+ S
Sbjct: 295 KFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVS 354
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S L+ + G +H ++RC L D+V+GNALV+MYA
Sbjct: 355 LASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYA------------------ 396
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
K S+ AR +F ++ R+V+SWN LI GY QNG EA+ + +++
Sbjct: 397 -------------KLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMME 443
Query: 378 R-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++ P T+ ++L A +++ LQ G + H ++K+ L FL D+FV LIDMY
Sbjct: 444 EGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCL-FL-----DVFVATCLIDMY 497
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +ED +F + + V WNA+I +G+G +AL LFK M G K DH+T +
Sbjct: 498 GKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH+GLV+E + F +M KE+ + P HY CMVDL GRAG L++A L+ MP+
Sbjct: 558 SLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI 617
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
Q DA IWG+LLAAC++H N LG + + +LLE++ N G YVLLSN+YA +G+W V+V
Sbjct: 618 QADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKV 677
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R L R RG+ K PG S + + V VF ++ HP EIY L++L +MK +GYVP+
Sbjct: 678 RSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDY 737
Query: 677 S 677
S
Sbjct: 738 S 738
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 224/474 (47%), Gaps = 87/474 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D+ + +L C +S V VH +IK S++F+ N LI++Y+K G L A++V
Sbjct: 246 MDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRV 305
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M +++ +WNSII + + Q+D AL
Sbjct: 306 FDGMEVRDLVSWNSII-------------------------------AAYEQNDDPVTAL 334
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDM 195
G+F +M + S S D ++G VH + + R+ D+ +G+AL++M
Sbjct: 335 GFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNM 394
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEV 253
Y K G + CAR VF+ + R+++SWN+LIT Y QNG AS+A++ + MM G I P++
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQG 453
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S++ A + + A ++G++IH RL++ L D+ + L+DMY KCG+L +A +F
Sbjct: 454 TWVSILPAYSHVGALQQGMKIHGRLIK-NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYE 512
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P ETS V WNA+I+ +G E+AL LF
Sbjct: 513 IP-----QETS--------------------------VPWNAIISSLGIHGHGEKALQLF 541
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL- 432
+ ++ + V H TF +LL+AC +H+ +V + + + +L
Sbjct: 542 KDMRADGVKADHITFVSLLSAC-----------SHSGLVDEAQWCFDTMQKEYRIKPNLK 590
Query: 433 -----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
+D++ + G +E + M ++ D W ++ C +G LG F
Sbjct: 591 HYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAAC--RIHGNAELGTF 642
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 219/449 (48%), Gaps = 51/449 (11%)
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ + Q+HALL + DV + + L+ +Y G +S + F ++ +NI SWNS+++
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 226 CYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y + G D+++ +++ SG+ PD T V+ AC SLA +G ++H +++
Sbjct: 123 AYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLA---DGEKMHCWVLKM-GF 178
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+D+ + +L+ +Y++ G + A VF MP+R+V S +M+SG+
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFC-------------- 224
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
QNG EAL + +K E V T ++L CA D+ G
Sbjct: 225 -----------------QNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG 267
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
H +V+KHGL ESD+FV N+LI+MY K G ++D R+F+ M RD VSWN++I
Sbjct: 268 VLVHLYVIKHGL------ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSII 321
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
QN ALG FK+ML G +PD +T++ + GR + + L
Sbjct: 322 AAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWL 381
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV-A 583
+V++ + G +D A+ + E +P + D + W +L+ +N + E + A
Sbjct: 382 EVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR-DVISWNTLITGYA--QNGLASEAIDA 438
Query: 584 KKLLE----IEPSNSGPYVLLSNMYAELG 608
++E I P N G +V + Y+ +G
Sbjct: 439 YNMMEEGRTIVP-NQGTWVSILPAYSHVG 466
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/671 (35%), Positives = 387/671 (57%), Gaps = 49/671 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDKMSN 82
L++ C+ S+ ++ H +I++ S+ + ++L + A L ARKVFD++
Sbjct: 36 LIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
N F WN++I R +AS P+ ++S +A D SE+ Y
Sbjct: 93 PNSFAWNTLI-------------RAYASGPD-------PVLSIWAFLDMVSESQCY---- 128
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
++Y+F + A A +G +H + KS SDV++ ++LI Y CG +
Sbjct: 129 ------PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A +VF ++E+++VSWNS+I + Q G ALE+F +M + ++ VT+ V+SAC
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A + + G Q+ + + ++ +L L NA++DMY KCG + +A+ +FD M ++ V+
Sbjct: 243 AKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK-RESV 381
T+M+ GYA + ++AR + M ++++V+WNALI+ Y QNG+ EAL +F L+ ++++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T + L+ACA + L+LGR H+++ KHG+R + V ++LI MY KCG
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM------NFHVTSALIHMYSKCGD 415
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E +F ++ +RD W+AMI G A +G G EA+ +F KM KP+ VT V CA
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+E F M +G+ P + HY C+VD+LGR+G L++A IEAMP+ P
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL ACK+H N+ L E +LLE+EP N G +VLLSN+YA+LG+W V +RK MR
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS---- 677
G+ K+PGCS IEI G ++ F+ D HP+++++Y L + ++K GY P S
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655
Query: 678 --DDEAYEEQN 686
++E +EQ+
Sbjct: 656 IIEEEEMKEQS 666
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 218/492 (44%), Gaps = 108/492 (21%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L+ + S+S + +H +KS S++F+ N LI Y CG L A KVF +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V +WNS+I G ++ G D A LF K
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFK-------------------------------K 222
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE+ S + LSACA + + G QV + + ++R + ++ + +A++DMY KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 202 VSCARRVFDGMRE-------------------------------RNIVSWNSLITCYEQN 230
+ A+R+FD M E ++IV+WN+LI+ YEQN
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 231 GPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G ++AL VF + + ++ +++TL S +SACA + A + G IH+ + + +R +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFH 401
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ +AL+ MY+KCG L ++R VF+ + R+V ++M+ G A A MF KM E N
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 350 V----VSWNALIAGYTQNGENEEALGLF-------------------------------- 373
V V++ + + G +EA LF
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 374 -RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ ++ + P+ +G LL AC A+L L A T R L E + L
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT-------RLLELEPRNDGAHVLL 574
Query: 433 IDMYMKCGSVED 444
++Y K G E+
Sbjct: 575 SNIYAKLGKWEN 586
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ L +C + ++ R +H+ I K + + LI +Y+KCG L +R+V
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
F+ + ++VF W+++I GL G ++A +F M E +
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/617 (39%), Positives = 363/617 (58%), Gaps = 25/617 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N +I Y + AR +FDKM +++F+WN ++TG ++ + +A +LF MP++D
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+M+SG+AQ+ EA F KM N S+ L+A + K + L
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHRN----SISWNGLLAAYVHNGRLKEARR----L 192
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+S+ + ++ + L+ Y K + AR++FD M R+++SWN++I+ Y Q G S A
Sbjct: 193 FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAK 252
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVD 296
+F +E + V + A ++ + + G+ AR E + + NA++
Sbjct: 253 RLF----------NESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLA 302
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + K+ A +F+ MP RN+ S +M++GY + + AR +F M +R+ VSW A+
Sbjct: 303 GYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAI 362
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+GY QNG EEAL +F +KR+ TF L+ CA++A L+LG+Q H VVK G
Sbjct: 363 ISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGF 422
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
E+ FVGN+L+ MY KCGS ++ +FE + E+D VSWN MI G A++G+G +A
Sbjct: 423 ------ETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQA 476
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L LF+ M G KPD +TM+GVL ACSH+GL++ G +YF SM +++ + P HYTCM+D
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMID 536
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGRAG L+EA+ L+ MP P A WG+LL A ++H N LGE A+ + ++EP NSG
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 596
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA GRW +V ++R MR+ GV K G SW+E+ ++ F V D HP I
Sbjct: 597 YVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRI 656
Query: 657 YLVLKMLTREMKRVGYV 673
Y L+ L +M+R GYV
Sbjct: 657 YAFLEELDLKMRREGYV 673
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 238/499 (47%), Gaps = 64/499 (12%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++ + +S + LL + + + + + RR + +SQ E+ N L+ Y K
Sbjct: 159 REVFNKMPHRNSISWNGLLAAYVHNGRLKEARR----LFESQSNWELISWNCLMGGYVKR 214
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
L AR++FD+M ++V +WN++I+G + G + A RLF P RD +W +MVSG+
Sbjct: 215 NMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYV 274
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+ EA YF +M +N E S+ + L AG V +K + L ++ ++
Sbjct: 275 QNGMVDEARKYFDEMPVKN----EISYNAML---AGYVQYKKMV-IAGELFEAMPCRNIS 326
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +I YG+ G ++ AR++FD M +R+ VSW ++I+ Y QNG +AL +FV M G
Sbjct: 327 SWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ T + +S CA +AA + G Q+H ++++ +GNAL+ MY KCG +EA
Sbjct: 387 ESSNRSTFSCALSTCADIAALELGKQVHGQVVKA-GFETGCFVGNALLGMYFKCGSTDEA 445
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF+ + ++VVS +M++GYA+ +G
Sbjct: 446 NDVFEGIEEKDVVSWNTMIAGYAR-------------------------------HGFGR 474
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+AL LF +K+ V P T +L+AC +H+ ++ G + + D
Sbjct: 475 QALVLFESMKKAGVKPDEITMVGVLSAC-----------SHSGLIDRGTEYFYSMDRDYN 523
Query: 428 VGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
V + +ID+ + G +E+ + M + SW A++ A +G LG
Sbjct: 524 VKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL--GASRIHGNTELGEK 581
Query: 481 KKMLLCGEKPDHVTMIGVL 499
++ +P + M +L
Sbjct: 582 AAEMVFKMEPQNSGMYVLL 600
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 181/420 (43%), Gaps = 92/420 (21%)
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
++ +IV+WN I+ + +NG AL VF M
Sbjct: 41 FKDPDIVTWNKAISSHMRNGHCDSALRVFNSM---------------------------- 72
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
R V NA++ Y + K + AR +FD+MP R++ S M++GY +
Sbjct: 73 ------------PRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVR 120
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGN 390
+ A +F M +++VVSWNA+++GY QNG +EA +F ++ R S+ ++
Sbjct: 121 NRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSI-----SWNG 175
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL A + L+ R+ F S ++ N L+ Y+K + D ++F+
Sbjct: 176 LLAAYVHNGRLKEARRL----------FESQSNWELISWNCLMGGYVKRNMLGDARQLFD 225
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP--DHVTMIGVLCACSHAGLV 508
M RD +SWN MI G AQ G ++A LF E P D T ++ G+V
Sbjct: 226 RMPVRDVISWNTMISGYAQVGDLSQAKRLFN------ESPIRDVFTWTAMVSGYVQNGMV 279
Query: 509 EEGRKYFSSMSKEHGLAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
+E RKYF M P+K+ Y M+ + + A L EAMP + + W ++
Sbjct: 280 DEARKYFDEM-------PVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTM 331
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEP--------------SNSGPYVLLSNMYAELGRWGE 612
+ + I A+KL ++ P + +G Y NM+ E+ R GE
Sbjct: 332 ITGYGQNGGIAQ----ARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 118/242 (48%), Gaps = 28/242 (11%)
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTF 388
+K S S K + ++V+WN I+ + +NG + AL +F + +R SV
Sbjct: 26 SKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMIS 85
Query: 389 GNLLNACANLA-DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
G L NA +LA DL F E D+F N ++ Y++ + + +
Sbjct: 86 GYLRNAKFSLARDL----------------FDKMPERDLFSWNVMLTGYVRNRRLGEAHK 129
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M ++D VSWNAM+ G AQNG+ EA +F KM + ++ G+L A H G
Sbjct: 130 LFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM----PHRNSISWNGLLAAYVHNGR 185
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
++E R+ F S S ++ + C++ + L +A+ L + MP++ D + W +++
Sbjct: 186 LKEARRLFESQSNWELIS-----WNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMI 239
Query: 568 AA 569
+
Sbjct: 240 SG 241
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/695 (33%), Positives = 390/695 (56%), Gaps = 51/695 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F +L+ C + R+VH ++K F + +++ N LID+Y KCG L A+KV
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRF 132
+ M+ K+ +WNSIIT + G + +A L +M E + +W++++ GF+ +
Sbjct: 192 LEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYD 251
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
E++ F +M A + S L AC+ +G ++H + + S+ ++ +AL
Sbjct: 252 VESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANAL 311
Query: 193 IDMYGKCGRVSCARRVFDGMR-----------------------------------ERNI 217
+ MY +CG + A ++F ER+
Sbjct: 312 VGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDR 371
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+SWN +I+ + N DAL +F ++ GIEPD TL S+++ A + ++G +IH+
Sbjct: 372 ISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHS- 430
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+ + L+++ +G ALV+MY KC + A+ FD + R+ + +++SGYA+ + +
Sbjct: 431 IAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGK 490
Query: 338 ARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
R + +M E NV +WN+++AG +N + + A+ LF ++ S+ P YT G +L
Sbjct: 491 IRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILA 550
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC+ LA + G+Q H + ++ +G +SD +G +L+DMY KCGS++ +++ +
Sbjct: 551 ACSKLATIHRGKQVHAYSIR------AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS 604
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+ V NAM+ A +G+G E + +F++ML +PDHVT + VL +C HAG ++ G +
Sbjct: 605 NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYE 664
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
F M + + + P HYTCMVDLL RAG LDEA LI+ MPM+ D+V W +LL C +H
Sbjct: 665 CFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIH 723
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+ + LGE A+KL+E+EPSN+G YVLL+N+YA GRW ++ + R+LM +G+ K PGCSW
Sbjct: 724 KEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSW 783
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
IE V++F+ DK H +EIY +L LT+ ++
Sbjct: 784 IEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 179/646 (27%), Positives = 302/646 (46%), Gaps = 115/646 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S+ ++ +L S S S++ +++H+ IK+ F + F+Q +L+ +Y+ A +
Sbjct: 32 LTSTTYSTILQS---SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKM+ KN+ +W +++ L G LF E C D E L
Sbjct: 89 FDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLF----EEFLC------------DGLGEKL 132
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+FV F L+ C G D ++G QVH ++ K + ++VY+G+ALIDMY
Sbjct: 133 DFFV-------------FPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMY 179
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL------------------- 237
GKCG + A++V +GM +++ VSWNS+IT NG +AL
Sbjct: 180 GKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWS 239
Query: 238 ----------------EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
E+F RM+ +G+ PD TLASV+ AC+ + G ++H ++R
Sbjct: 240 AVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRH 299
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
E N V NALV MY +CG + A +F + + S +M+ GY + +V A+ +
Sbjct: 300 ELFSNGFV-ANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKEL 358
Query: 342 FTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
F +M +ER+ +SWN +I+G+ N ++AL LFR L E + P +T G++L A+
Sbjct: 359 FYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFAD 418
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
+ ++ G++ H+ + GL +S+ FVG +L++MY KC + F+ + ERD
Sbjct: 419 MTCIRQGKEIHSIAIVKGL------QSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDT 472
Query: 458 VSWNAMIVG---CAQNGYGTE--------------------------------ALGLFKK 482
+WNA+I G C Q G E A+ LF +
Sbjct: 473 STWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNE 532
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M + +PD T+ +L ACS + G++ + S G +VD+ + G
Sbjct: 533 MQVSSLRPDIYTVGIILAACSKLATIHRGKQ-VHAYSIRAGYDSDAHIGATLVDMYAKCG 591
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+ + + P+ V ++L A +H + G + +++L+
Sbjct: 592 SIKHCYQVYNKIS-NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLD 636
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 232/503 (46%), Gaps = 86/503 (17%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
++VG D+ A +L +C R K + + +H I++ + S F+ N L+ +Y +CG
Sbjct: 260 RMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCG 319
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVS 124
+ A K+F K + K ++N++I G L+ G + A LF M ERD+ SWN M+S
Sbjct: 320 DMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMIS 379
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G + F +AL F + E ++ GS L+ A + G ++H++ S
Sbjct: 380 GHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQS 439
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE---------------- 228
+ ++G AL++MY KC + A+ FD + ER+ +WN+LI+ Y
Sbjct: 440 NSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMK 499
Query: 229 -------------------QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
+N A+++F M S + PD T+ +++AC+ LA
Sbjct: 500 SDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIH 559
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G Q+HA +R +D +G LVDMYAKCG + V++++ N+V +M++ Y
Sbjct: 560 RGKQVHAYSIRA-GYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAY 618
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
A +G EE + +FR + V P H TF
Sbjct: 619 A-------------------------------MHGHGEEGIVIFRRMLDSRVRPDHVTFL 647
Query: 390 NLLNACANLADLQLGRQA----HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
++L++C + +++G + T+ + L+ + ++D+ + G +++
Sbjct: 648 SVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYT----------CMVDLLSRAGKLDEA 697
Query: 446 CRIFETM-VERDWVSWNAMIVGC 467
++ + M +E D V+W+A++ GC
Sbjct: 698 YQLIKNMPMEADSVTWSALLGGC 720
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 27/244 (11%)
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F LL + T T+ +L + +L LG+Q H+H +K G + FV L
Sbjct: 24 FSLLHTPPLTST--TYSTILQSSNSLT---LGKQLHSHSIKTGFY------NHNFVQTKL 72
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL--CGEKP 490
+ MY S ED +F+ M ++ SW A++ G + LF++ L GEK
Sbjct: 73 LQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKL 132
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D VL C G +E GR+ M +HG ++D+ G+ G LDEAK +
Sbjct: 133 DFFVFPVVLNICCGLGDLELGRQ-VHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
+E M Q D V W S++ AC + + Y A LLE +LLS + + W
Sbjct: 192 LEGMT-QKDCVSWNSIITACVANGVV----YEALDLLE--------NMLLSELEPNVVTW 238
Query: 611 GEVV 614
V+
Sbjct: 239 SAVI 242
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/433 (47%), Positives = 304/433 (70%), Gaps = 7/433 (1%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ G++P++ TL++VV ACAS+A+ ++G Q H +++ +D+V+ ALV MYA+CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKM-GFESDVVVQTALVHMYARCG 59
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L +A VFD+M R+ + +M++G+A+ +K A +F +M ER+VVSW A+IAGY Q
Sbjct: 60 SLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NG +E+L +F +++ + + G++L+ACA+LA L+LGRQ H +VV+ G
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFAL---- 175
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
DI VG++L+DMY K GS+ED C++F+ M +R+ VSWN++I GCAQ+G G +A+ LF++
Sbjct: 176 --DIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQ 233
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML G KP+ ++ +GVL ACSH GLV EGR YF+ M++ +G+ P HYTCM+DLLGRAG
Sbjct: 234 MLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
CLDEA+ I MP++PD +WG+LL AC++H N L + +A+ LL +E +G YVLLSN
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSN 353
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
+YA G+W + +VRKLM+ RGV+KQPG SWIE+ ++ F+ + HP KEI+ L+
Sbjct: 354 IYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLES 413
Query: 663 LTREMKRVGYVPN 675
L+R+MK GYVPN
Sbjct: 414 LSRKMKAAGYVPN 426
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 172/300 (57%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ ++ +C S+ ++ H IIK F S++ +Q L+ +YA+CG L A VFDKMS
Sbjct: 13 LSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ TWN++ITG + + A +LF M ERD SW ++++G+AQ+ E+L F +
Sbjct: 73 ERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQ 132
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + GS LSACA ++G Q HA + +S ++ D+ +GSAL+DMY K G
Sbjct: 133 MRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGS 192
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +VFD M +RN VSWNS+IT Q+G +DA+ +F +M+ +GI+P+E++ V+SA
Sbjct: 193 MEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSA 252
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ EG + + + D+ ++D+ + G L+EA + MP+ VS
Sbjct: 253 CSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVS 312
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 144/276 (52%), Gaps = 39/276 (14%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
++++ + + ACA + G Q H + K + SDV + +AL+ MY +CG + A VF
Sbjct: 9 NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 210 DG-------------------------------MRERNIVSWNSLITCYEQNGPASDALE 238
D M ER++VSW ++I Y QNG ++L
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
VF +M +G++ D + SV+SACA LAA + G Q HA +++ D+V+G+ALVDMY
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQ-SGFALDIVVGSALVDMY 187
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWN 354
AK G + +A VFD+MP RN VS S+++G A+ A L+F +ML+ N +S+
Sbjct: 188 AKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFV 247
Query: 355 ALIAGYTQNGENEEALGLFRLLKRE-SVCP--THYT 387
+++ + G E G F L+ + + P +HYT
Sbjct: 248 GVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYT 283
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/720 (34%), Positives = 384/720 (53%), Gaps = 110/720 (15%)
Query: 33 KSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
K V D R +VHA + + F S++F+ N L+ +Y
Sbjct: 111 KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGG----------------------- 147
Query: 90 SIITGLLKWGFIDDASRLFASM-PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+GF+DDA R+F ER+ SWN ++S + ++D+ +A+ F +M
Sbjct: 148 --------FGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E+ F ++AC GS + + G QVHA++ + Y DV+ +AL+DMY K GRV A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M + ++VSWN+LI+ NG A+E+ ++M SG+ P+ TL+S++ AC+ AF
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319
Query: 269 KEGLQIHARLMRCEK------------------------------LRNDLVLGNALVDMY 298
G QIH +++ DL+L NAL+
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379
Query: 299 AKCGKLNEARCVF----------DRMPIRNVVSETS------------------------ 324
+ G+ +EA +F +R + V+ T+
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439
Query: 325 -----MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ Y K S + A +F + ++++ ++I +Q E A+ LF + R+
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNACA+L+ + G+Q H H++K +F+S D F GN+L+ Y KC
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--QFMS----DAFAGNALVYTYAKC 553
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F ++ ER VSW+AMI G AQ+G+G AL LF +M+ G P+H+TM VL
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAGLV+E ++YF+SM + G+ ++HY+CM+DLLGRAG LD+A L+ +MP Q +
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A IWG+LL A +VH++ LG+ A+KL +EP SG +VLL+N YA G W EV +VRKL
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ + K+P SWIE+ V+ F+V DK HP+ KEIY L L M + G+VPN D
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 204/397 (51%), Gaps = 42/397 (10%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A R F +P+ SW+S+V+ ++ + A+ F M +E +E++ L
Sbjct: 56 ARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP- 114
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF-DGMRERNIVSWNS 222
D ++G QVHA+ + + SDV++ +AL+ MYG G + ARRVF + ERN VSWN
Sbjct: 115 --DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNG 172
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
L++ Y +N DA++VF M+ SGI+P E + VV+AC + G Q+HA ++R
Sbjct: 173 LMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM- 231
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
D+ NALVDMY K G+++ A +F++MP
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMP--------------------------- 264
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ +VVSWNALI+G NG + A+ L +K + P +T ++L AC+
Sbjct: 265 ----DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFD 320
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
LGRQ H ++K + +SD ++G L+DMY K ++D ++F+ M RD + NA
Sbjct: 321 LGRQIHGFMIK------ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNA 374
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+I GC+ G EAL LF ++ G + T+ VL
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 201/403 (49%), Gaps = 48/403 (11%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G +HA L KS S + LI Y KC R CARR FD + + VSW+SL+T Y
Sbjct: 23 GAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG A++ F M A G+ +E L VV C A + G Q+HA M +D+
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDA--RLGAQVHAMAM-ATGFGSDVF 136
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NALV MY G +++AR VF+ +A S ++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFN------------------EADSERNA----------- 167
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VSWN L++ Y +N + +A+ +F + + PT + F ++NAC +++ GRQ H
Sbjct: 168 -VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHA 226
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
VV+ G + D+F N+L+DMYMK G V+ IFE M + D VSWNA+I GC
Sbjct: 227 MVVRMGY------DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
NG+ A+ L +M G P+ T+ +L ACS AG + GR+ M K + + D
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADS---D 337
Query: 530 HY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
Y +VD+ + LD+A+ + + M D ++ +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 207/444 (46%), Gaps = 69/444 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L +C + + R++H +IK+ S+ +I L+D+YAK L ARKVFD M
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++++ N++I+G G R EAL F +
Sbjct: 366 HRDLILCNALISGCSHGG-------------------------------RHDEALSLFYE 394
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E ++ + + L + A QVHAL K + D ++ + LID Y KC
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC 454
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S A RVF+ +I++ S+IT Q A+++F+ M+ G+EPD L+S+++A
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CASL+A+++G Q+HA L++ + +D GNALV YAKCG + +A F +P R VVS
Sbjct: 515 CASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++M+ G A Q+G + AL LF + E +
Sbjct: 574 WSAMIGGLA-------------------------------QHGHGKRALELFGRMVDEGI 602
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P H T ++L AC N A L + + + +K EE + +ID+ + G
Sbjct: 603 NPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEH----YSCMIDLLGRAGK 657
Query: 442 VEDGCRIFETM-VERDWVSWNAMI 464
++D + +M + + W A++
Sbjct: 658 LDDAMELVNSMPFQANASIWGALL 681
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 31/301 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + A +L S ++ S TR+VHA +K F + + N LID Y KC CL A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ S+ ++ S+IT L QC D A+
Sbjct: 462 FEECSSGDIIACTSMITAL-------------------SQC------------DHGEGAI 490
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F++M + + S L+ACA ++ G QVHA L K ++ SD + G+AL+ Y
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTY 550
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A F + ER +VSW+++I Q+G ALE+F RM+ GI P+ +T+
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMT 610
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + + + ++D+ + GKL++A + + MP
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 670
Query: 317 R 317
+
Sbjct: 671 Q 671
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 61/353 (17%)
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T++ ++ A+ A G +HA L++ L + N L+ Y+KC + AR FD
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRFFDE 62
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P + VSW++L+ Y+ NG A+ F
Sbjct: 63 IP-------------------------------DPCHVSWSSLVTAYSNNGLPRSAIQAF 91
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ E VC + +L + D +LG Q H + +G SD+FV N+L+
Sbjct: 92 HGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHA------MAMATGFGSDVFVANALV 142
Query: 434 DMYMKCGSVEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
MY G ++D R+F E ER+ VSWN ++ +N +A+ +F +M+ G +P
Sbjct: 143 AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT--CMVDLLGRAGCLDEAKTL 550
V+ AC+ + +E GR+ + + + + KD +T +VD+ + G +D A +
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVR---MGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 551 IEAMPMQPDAVIWGSLLAACKV----HRNIMLGEYVAKKLLEIEPSNSGPYVL 599
E MP D V W +L++ C + HR I L LL+++ S P V
Sbjct: 260 FEKMP-DSDVVSWNALISGCVLNGHDHRAIEL-------LLQMKYSGLVPNVF 304
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ PF + LL++C + ++VHA +IK QF S+ F N L+ YAKCG + A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F + + V +W+++I GL AQH
Sbjct: 561 LAFSSLPERGVVSWSAMIGGL-------------------------------AQHGHGKR 589
Query: 135 ALGYFVKMHSENFALSEYSFGSALSAC--AGSVD--FKMGTQVHALLSKSRYSSDVYMGS 190
AL F +M E + + S L AC AG VD + + + R + + Y S
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR-TEEHY--S 646
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ID+ G+ G++ A + + M + N W +L+
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 369/624 (59%), Gaps = 16/624 (2%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTW----NSIITGLLKWGFIDDASRLFASMPERD 115
+ V C L R++ +++ + ++ N+++T ++G + DA R+F S+ RD
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+ SWN+++ +Q +S AL F +M + + ++ + +S + G ++HA
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+ + + SD+ + +ALI+MYGKCG AR VFD M++R++VSWN +I CY QNG +
Sbjct: 232 EIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHE 291
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
ALE++ ++ G + + T S++ AC+S+ A +G +H+ ++ L +++ + ALV
Sbjct: 292 ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE-RGLDSEVAVATALV 350
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK---ASSVKSARLMFTKMLERNVVS 352
+MYAKCG L EAR VF+ M R+ V+ ++++ YA + AR +F ++ R+ +
Sbjct: 351 NMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIC 410
Query: 353 WNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WNA+I Y QNG A+ +FR + + P TF +L ACA+L L + H +
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ L ES++ V N+LI+MY +CGS+E+ R+F E+ VSW AM+ +Q G
Sbjct: 471 SESEL------ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL LF++M L G KPD VT +L C+H G +E+G +YF+ M++ HGLAP DH+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHF 584
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
MVDLLGR+G L +AK L+E+MP +PD V W + L AC++H + LGE A+++ E++P
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDP 644
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
S++ PY+ +SN+YA G W +V VRK M +RG+ K PG S+IE+ G ++ F K HP
Sbjct: 645 SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHP 704
Query: 652 LNKEIYLVLKMLTREMKRVGYVPN 675
EI L L M+ GYVP+
Sbjct: 705 RTDEICEELTRLHGLMRAAGYVPD 728
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/589 (29%), Positives = 278/589 (47%), Gaps = 112/589 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L SC V++ R +H RI S+F + + N LI +Y KC L AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 78 DKMS--NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ M +NV +W N+M++ +AQ+ +EA
Sbjct: 66 ESMDWRQRNVVSW-------------------------------NAMIAAYAQNGHSTEA 94
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L + +M+ + +F S L AC+ G ++H + S S + +AL+ M
Sbjct: 95 LVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTM 151
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + G V A+R+F ++ R+ SWN++I + Q+G S AL +F + M ++P+ T
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF-KEMKCDMKPNSTTY 210
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+S ++ EG +IHA ++ +DLV+ AL++MY KCG +EAR VFD+M
Sbjct: 211 INVISGFSTPEVLPEGRKIHAEIV-ANGFDSDLVVATALINMYGKCGSSHEAREVFDKMK 269
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R+ +VSWN +I Y QNG+ EAL L++
Sbjct: 270 KRD-------------------------------MVSWNVMIGCYVQNGDFHEALELYQK 298
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L E T TF ++L AC+++ L GR H+H+++ GL +S++ V +L++M
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGL------DSEVAVATALVNM 352
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE-------------------- 475
Y KCGS+E+ ++F M RD V+W+ +I A NGYG +
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWN 412
Query: 476 --------------ALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+ +F++M G KPD VT I VL AC+ G + E + + +S
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS- 471
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
E L ++++ R G L+EA+ L A + V W +++AA
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 228/491 (46%), Gaps = 106/491 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S+ + ++ + + + R++HA I+ + F S++ + LI++Y KCG + AR+VF
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM +++ +W N M+ + Q+ F EAL
Sbjct: 266 DKMKKRDMVSW-------------------------------NVMIGCYVQNGDFHEALE 294
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ K+ E F ++ +F S L AC+ G VH+ + + S+V + +AL++MY
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354
Query: 198 KCGRVSCARRVFDGMRERNIVS----------------------------------WNSL 223
KCG + AR+VF+ M+ R+ V+ WN++
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAM 414
Query: 224 ITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
IT Y QNG A A+++F M A+G++PD VT +V+ ACASL E +HA++ E
Sbjct: 415 ITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE 474
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L +++V+ N L++MYA+CG L EA +F + VVS T+MV
Sbjct: 475 -LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV---------------- 517
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
A ++Q G EAL LF+ + E V P T+ ++L C + L+
Sbjct: 518 ---------------AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLE 562
Query: 403 LGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSW 460
G + T + + HGL +D F +++D+ + G + D + E+M E D V+W
Sbjct: 563 QGWRYFTDMAELHGL----APTADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAW 616
Query: 461 NAMIVGCAQNG 471
+ C +G
Sbjct: 617 MTFLTACRIHG 627
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 194/428 (45%), Gaps = 87/428 (20%)
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+PD VT +V+ +C+S EG +H R+ RC + D ++GNAL+ MY KC L +AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERI-RCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 309 CVFDRMPI--RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
VF+ M RNVVS +M++ YA QNG +
Sbjct: 63 SVFESMDWRQRNVVSWNAMIAAYA-------------------------------QNGHS 91
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EAL L+ + + + H TF ++L AC++LA GR+ H V F SG +S
Sbjct: 92 TEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRV------FYSGLDSFQ 142
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+ N+L+ MY + GSV D R+F+++ RD SWNA+I+ +Q+G + AL +FK+M C
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KC 201
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
KP+ T I V+ S ++ EGRK + + +G T ++++ G+ G E
Sbjct: 202 DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA-NGFDSDLVVATALINMYGKCGSSHE 260
Query: 547 AKTLIEAMPMQPDAVIWG-----------------------------------SLLAACK 571
A+ + + M + D V W S+L AC
Sbjct: 261 AREVFDKMK-KRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 572 VHRNIMLGEYVAKKLLEIE-PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+ + G V +LE S L NMYA+ G E +V M+ R V
Sbjct: 320 SVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAV---- 375
Query: 631 CSWIEILG 638
+W ++G
Sbjct: 376 -AWSTLIG 382
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/720 (34%), Positives = 384/720 (53%), Gaps = 110/720 (15%)
Query: 33 KSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
K V D R +VHA + + F S++F+ N L+ +Y
Sbjct: 111 KCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGG----------------------- 147
Query: 90 SIITGLLKWGFIDDASRLFASM-PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+GF+DDA R+F ER+ SWN ++S + ++D+ +A+ F +M
Sbjct: 148 --------FGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E+ F ++AC GS + + G QVHA++ + Y DV+ +AL+DMY K GRV A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M + ++VSWN+LI+ NG A+E+ ++M SG+ P+ TL+S++ AC+ AF
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAF 319
Query: 269 KEGLQIHARLMRCEK------------------------------LRNDLVLGNALVDMY 298
G QIH +++ DL+L NAL+
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGC 379
Query: 299 AKCGKLNEARCVF----------DRMPIRNVVSETS------------------------ 324
+ G+ +EA +F +R + V+ T+
Sbjct: 380 SHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDA 439
Query: 325 -----MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ Y K S + A +F + ++++ ++I +Q E A+ LF + R+
Sbjct: 440 HVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNACA+L+ + G+Q H H++K +F+S D F GN+L+ Y KC
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--QFMS----DAFAGNALVYTYAKC 553
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F ++ ER VSW+AMI G AQ+G+G AL LF +M+ G P+H+TM VL
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAGLV+E ++YF+SM + G+ ++HY+CM+DLLGRAG LD+A L+ +MP Q +
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A IWG+LL A +VH++ LG+ A+KL +EP SG +VLL+N YA G W EV +VRKL
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ + K+P SWIE+ V+ F+V DK HP+ KEIY L L M + G+VPN D
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 224/461 (48%), Gaps = 75/461 (16%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+HA ++KS S +N LI Y+KC AR+VFD++
Sbjct: 25 HLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRVFDEI------------------- 63
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
P+ SW+S+V+ ++ + A+ F M +E +E++ L
Sbjct: 64 ------------PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK 111
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF-DGMRERNIV 218
D ++G QVHA+ + + SDV++ +AL+ MYG G + ARRVF + ERN V
Sbjct: 112 CVP---DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAV 168
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWN L++ Y +N DA++VF M+ SGI+P E + VV+AC + G Q+HA +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMV 228
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R D+ NALVDMY K G+++ A +F++MP
Sbjct: 229 VRM-GYDKDVFTANALVDMYMKMGRVDIASVIFEKMP----------------------- 264
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+ +VVSWNALI+G NG + A+ L +K + P +T ++L AC+
Sbjct: 265 --------DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
LGRQ H ++K + +SD ++G L+DMY K ++D ++F+ M RD +
Sbjct: 317 GAFDLGRQIHGFMIK------ANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLI 370
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
NA+I GC+ G EAL LF ++ G + T+ VL
Sbjct: 371 LCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 202/403 (50%), Gaps = 48/403 (11%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G +HA L KS S + LI Y KC R CARRVFD + + VSW+SL+T Y
Sbjct: 23 GAHLHASLLKS--GSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG A++ F M A G+ +E L VV C A + G Q+HA M +D+
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDA--RLGAQVHAMAM-ATGFGSDVF 136
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NALV MY G +++AR VF+ +A S ++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFN------------------EADSERNA----------- 167
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VSWN L++ Y +N + +A+ +F + + PT + F ++NAC +++ GRQ H
Sbjct: 168 -VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHA 226
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
VV+ G + D+F N+L+DMYMK G V+ IFE M + D VSWNA+I GC
Sbjct: 227 MVVRMGY------DKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
NG+ A+ L +M G P+ T+ +L ACS AG + GR+ M K + + D
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADS---D 337
Query: 530 HY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
Y +VD+ + LD+A+ + + M D ++ +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 207/444 (46%), Gaps = 69/444 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L +C + + R++H +IK+ S+ +I L+D+YAK L ARKVFD M
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++++ N++I+G G R EAL F +
Sbjct: 366 HRDLILCNALISGCSHGG-------------------------------RHDEALSLFYE 394
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E ++ + + L + A QVHAL K + D ++ + LID Y KC
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSC 454
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S A RVF+ +I++ S+IT Q A+++F+ M+ G+EPD L+S+++A
Sbjct: 455 LSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNA 514
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CASL+A+++G Q+HA L++ + +D GNALV YAKCG + +A F +P R VVS
Sbjct: 515 CASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS 573
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++M+ G A Q+G + AL LF + E +
Sbjct: 574 WSAMIGGLA-------------------------------QHGHGKRALELFGRMVDEGI 602
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P H T ++L AC N A L + + + +K EE + +ID+ + G
Sbjct: 603 NPNHITMTSVLCAC-NHAGLVDEAKRYFNSMKEMFGIDRTEEH----YSCMIDLLGRAGK 657
Query: 442 VEDGCRIFETM-VERDWVSWNAMI 464
++D + +M + + W A++
Sbjct: 658 LDDAMELVNSMPFQANASIWGALL 681
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 31/301 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + A +L S ++ S TR+VHA +K F + + N LID Y KC CL A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ S+ ++ S+IT L QC D A+
Sbjct: 462 FEECSSGDIIACTSMITAL-------------------SQC------------DHGEGAI 490
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F++M + + S L+ACA ++ G QVHA L K ++ SD + G+AL+ Y
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTY 550
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A F + ER +VSW+++I Q+G ALE+F RM+ GI P+ +T+
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMT 610
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + + + ++D+ + GKL++A + + MP
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 670
Query: 317 R 317
+
Sbjct: 671 Q 671
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 159/353 (45%), Gaps = 61/353 (17%)
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T++ ++ A+ A G +HA L++ L + N L+ Y+KC + AR VFD
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRVFDE 62
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P + VSW++L+ Y+ NG A+ F
Sbjct: 63 IP-------------------------------DPCHVSWSSLVTAYSNNGLPRSAIQAF 91
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ E VC + +L + D +LG Q H + +G SD+FV N+L+
Sbjct: 92 HGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHA------MAMATGFGSDVFVANALV 142
Query: 434 DMYMKCGSVEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
MY G ++D R+F E ER+ VSWN ++ +N +A+ +F +M+ G +P
Sbjct: 143 AMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTE 202
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT--CMVDLLGRAGCLDEAKTL 550
V+ AC+ + +E GR+ + + + + KD +T +VD+ + G +D A +
Sbjct: 203 FGFSCVVNACTGSRNIEAGRQVHAMVVR---MGYDKDVFTANALVDMYMKMGRVDIASVI 259
Query: 551 IEAMPMQPDAVIWGSLLAACKV----HRNIMLGEYVAKKLLEIEPSNSGPYVL 599
E MP D V W +L++ C + HR I L LL+++ S P V
Sbjct: 260 FEKMP-DSDVVSWNALISGCVLNGHDHRAIEL-------LLQMKYSGLVPNVF 304
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ PF + LL++C + ++VHA +IK QF S+ F N L+ YAKCG + A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F + + V +W+++I GL AQH
Sbjct: 561 LAFSSLPERGVVSWSAMIGGL-------------------------------AQHGHGKR 589
Query: 135 ALGYFVKMHSENFALSEYSFGSALSAC--AGSVD--FKMGTQVHALLSKSRYSSDVYMGS 190
AL F +M E + + S L AC AG VD + + + R + + Y S
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR-TEEHY--S 646
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ID+ G+ G++ A + + M + N W +L+
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/628 (38%), Positives = 351/628 (55%), Gaps = 50/628 (7%)
Query: 52 SEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
S IF + V K C Y +VF +S++ K G + +A +F M
Sbjct: 125 SSIFFGQQAHAVAIKMACFY------------DVFVGSSLLNMYCKAGLLFEAREVFDRM 172
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
PER++ +W +M+SG+A EA F M E ++E++F S LSA A G
Sbjct: 173 PERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGK 232
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+H L K+ + + +AL+ MY KCG + + +VF+ ++N ++W+++IT Y Q+G
Sbjct: 233 QIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSG 292
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ AL++F RM +GI P E TL V++AC+ A +EG Q+H L++ + L +
Sbjct: 293 DSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKL-GFESQLYIM 351
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
ALVDMYA K+ + AR F + + ++V
Sbjct: 352 TALVDMYA-------------------------------KSGVTEDARKGFNYLQQPDLV 380
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
W ++IAGY QNGENE+AL L+ ++ E + P T ++L AC+NLA GRQ H
Sbjct: 381 LWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K+GL ++ +G++L MY KCG++E+G +F M ERD +SWNAMI G +QNG
Sbjct: 441 IKYGLGL------EVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNG 494
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
YG EAL LF++M KPD VT + VL ACSH GLV+ G YF M E GL P +HY
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHY 554
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVD+L RAG L EAK IE+ + +W LL AC+ +RN LG Y +KL+E+
Sbjct: 555 ACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGS 614
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
S YVLLS +Y LGR +V RVR +M+ RGV K+PGCSWIE+ +V+VF+V D+ HP
Sbjct: 615 QESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHP 674
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNASDD 679
EI + L+++MK GY P + D
Sbjct: 675 CIGEIRTEILRLSKQMKDEGYQPASVTD 702
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 142/285 (49%), Gaps = 33/285 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L++C + +V + ++VH ++K F S+++I L+D+YAK G ARK F+ + +
Sbjct: 319 VLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPD 378
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ W S+I +G+ Q+ +AL + +M
Sbjct: 379 LVLWTSMI-------------------------------AGYVQNGENEDALSLYCRMQM 407
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E +E + S L AC+ F G Q+HA K +V +GSAL MY KCG +
Sbjct: 408 EGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEE 467
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
VF M ER+I+SWN++I+ QNG +ALE+F M +PD+VT +V+SAC+
Sbjct: 468 GNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSH 527
Query: 265 LAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEAR 308
+ G ++ R+M E L + +VD+ ++ GKL EA+
Sbjct: 528 MGLVDSGW-LYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAK 571
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 145/305 (47%), Gaps = 41/305 (13%)
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
+ ++G +HA++++ + + L N+L++ YAKC L
Sbjct: 22 SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHL---------------------- 59
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA--LGLFRLLKRESVCPT 384
A+L+F ++ ++V+SWN LI GY+Q G + + LF+ ++ +++ P
Sbjct: 60 ---------PKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPN 110
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+TF + A +NL+ + G+QAH +K + D+FVG+SL++MY K G + +
Sbjct: 111 AHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFY------DVFVGSSLLNMYCKAGLLFE 164
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M ER+ V+W MI G A EA +F+ M E + VL A +
Sbjct: 165 AREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAV 224
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
V+ G++ ++ + GL +V + + G LD++ + E M +++ W
Sbjct: 225 PEFVDSGKQ-IHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFE-MSNDKNSITWS 282
Query: 565 SLLAA 569
+++
Sbjct: 283 AMITG 287
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P + + N L + LQ GR H ++K L+ S I++ NSLI+ Y KC +
Sbjct: 5 PQNLSSFNSLVQFTHQKSLQKGRALHAQIIK-----LASSSSCIYLANSLINFYAKCCHL 59
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGY--GTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+F+ + +D +SWN +I G +Q G + + LF++M P+ T G+
Sbjct: 60 PKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFT 119
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
A S+ + G++ + K +A D + + ++++ +AG L EA+ + + MP +
Sbjct: 120 AASNLSSIFFGQQAHAVAIK---MACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMP-ER 175
Query: 559 DAVIWGSLLAACKVHR 574
+ V W ++++ + R
Sbjct: 176 NEVTWATMISGYAIQR 191
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A +L +C + R++HAR IK E+ I + L +YAKCG L VF +M
Sbjct: 418 ASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPE 477
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+++ +WN++I+GL + G+ +A LF M ++D
Sbjct: 478 RDIISWNAMISGLSQNGYGKEALELFEEMRQQD 510
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/726 (34%), Positives = 386/726 (53%), Gaps = 110/726 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A ++ +C + V ++H +++S F ++++ LID Y+K G
Sbjct: 132 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGN------------ 179
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I++A +F + E+ +W ++++G+ + R + +L F +
Sbjct: 180 -------------------IEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 220
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N Y S LSAC+ + G Q+HA + + DV + + LID Y KC R
Sbjct: 221 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 280
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R++FD M +NI+SW ++I+ Y QN +A+++F M G +PD SV+++
Sbjct: 281 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 340
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG------------------- 302
C S A ++G Q+HA ++ L +D + N L+DMYAK
Sbjct: 341 CGSREALEQGRQVHAYTIKA-NLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 399
Query: 303 ------------KLNEARCVFDRMPIR--------------------------------- 317
KL+EA +F M +R
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459
Query: 318 ------NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
++ + ++++ Y+K S VK AR +F +M E+++V WNA+ GYTQ+ ENEEAL
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
L+ L+ P +TF L+ A +NLA L+ G+Q H +VK GL F FV N+
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP------FVTNA 573
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KCGS+E+ ++F + + RD V WN+MI AQ+G EALG+F++M+ G +P+
Sbjct: 574 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 633
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+VT + VL ACSHAG VE+G +F+SM G+ P +HY C+V LLGR+G L EAK I
Sbjct: 634 YVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFI 692
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
E MP++P A++W SLL+AC++ N+ LG+Y A+ + +P +SG Y+LLSN++A G W
Sbjct: 693 EKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWA 752
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+V +VR M VVK+PG SWIE+ VNVF+ +D H +I VL +L + +K G
Sbjct: 753 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHR-EADIGSVLDILIQHIKGAG 811
Query: 672 YVPNAS 677
YVP+A+
Sbjct: 812 YVPDAT 817
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/553 (28%), Positives = 267/553 (48%), Gaps = 72/553 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL + + + +H +II S S+ F+ N LI+V +K + AR VFDK
Sbjct: 30 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDK-- 87
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
MP ++ +W+SMVS ++Q EAL FV
Sbjct: 88 -----------------------------MPHKNLITWSSMVSMYSQQGYSEEALMVFVD 118
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ ++ +E+ S + AC + G Q+H + +S + DVY+G++LID Y K G
Sbjct: 119 LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNG 178
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR VFD + E+ V+W ++I Y + G ++ +LE+F +M + + PD ++SV+S
Sbjct: 179 NIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLS 238
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ L + G QIHA ++R D+ + N L+D Y KC ++ R +FD+M ++N++
Sbjct: 239 ACSMLEFLEGGKQIHAYVLR-RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNII 297
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S T+M+S GY QN + EA+ LF + R
Sbjct: 298 SWTTMIS-------------------------------GYMQNSFDWEAMKLFGEMNRLG 326
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P + ++L +C + L+ GRQ H + +K L ESD FV N LIDMY K
Sbjct: 327 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANL------ESDEFVKNGLIDMYAKSN 380
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ D ++F+ M E++ +S+NAMI G + +EAL LF +M + P +T + +L
Sbjct: 381 LLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL- 439
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
S + E K + + G++ + ++D+ + + +A+ + E M + D
Sbjct: 440 GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDI 498
Query: 561 VIWGSLLAACKVH 573
V+W ++ H
Sbjct: 499 VVWNAMFFGYTQH 511
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/672 (35%), Positives = 387/672 (57%), Gaps = 46/672 (6%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F + L +C+ + + + +HA IKS + ++ N + +Y+KC L AR+VFD
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF++N++I+ K +++ A +LF MP+ D S+N++++ +A+ A F++
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++ ++AC ++ + Q+HAL + S V +G+ALI Y K G
Sbjct: 131 MREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ ARR+F + E R+ VSWNS++ Y Q+ S ALE+++ M G+ D TLASV++
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A ++ GLQ HA+L++ +N V G+ L+D+Y+KCG C+ D
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHV-GSGLIDLYSKCGG-----CMLD-------- 294
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGLFRLLKRE 379
R +F ++ ++V WN +I+GY+ + ++EAL FR L+
Sbjct: 295 -----------------CRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVV 337
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + +++AC+N++ GRQ H +K L + I V N+LI MY KC
Sbjct: 338 GHRPDDCSLVCVISACSNMSSPSQGRQVHGLALK-----LDIPSNRISVNNALIAMYSKC 392
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ D +F+TM E + VS+N+MI G AQ+G G ++L LF++ML G P ++T I VL
Sbjct: 393 GNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVL 452
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G VE+G+ YF+ M ++ G+ P H++CM+DLLGRAG L EA+ LIE +P P
Sbjct: 453 AACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPG 512
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
W +LL AC++H N+ L A +LL+++P N+ PYV+L+N+Y++ GR + VRKL
Sbjct: 513 FFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKL 572
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---- 675
MR RGV K+PGCSWIE+ +++F+ +D HP+ K+I L+ + R++K+VGY P
Sbjct: 573 MRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSA 632
Query: 676 --ASDDEAYEEQ 685
DD ++ +
Sbjct: 633 LVGGDDRVWQRE 644
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 226/493 (45%), Gaps = 93/493 (18%)
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+F+ ++F L C D + G +HAL KS + Y+ + + +Y KC R+S
Sbjct: 2 HHFSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSA 61
Query: 205 ARRVFDGMRERNI-------------------------------VSWNSLITCYEQNGPA 233
ARRVFD + N+ VS+N+LI Y + G
Sbjct: 62 ARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDT 121
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL--QIHARLMRCEKLRNDLVLG 291
A ++F+ M + ++ D TL+ +++AC GL Q+HA L L + + +G
Sbjct: 122 QPAFQLFLEMREAFLDMDGFTLSGIITAC----GINVGLIRQLHA-LSVVTGLDSYVSVG 176
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NAL+ Y+K G L EAR +F + +SE +R+ V
Sbjct: 177 NALITSYSKNGFLKEARRIF------HWLSE------------------------DRDEV 206
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SWN+++ Y Q+ E +AL L+ + + +T ++L A N+ DL G Q H +
Sbjct: 207 SWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKL 266
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR-IFETMVERDWVSWNAMIVGCA-Q 469
+K SG + VG+ LID+Y KCG CR +F+ + D V WN MI G +
Sbjct: 267 IK------SGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLY 320
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
EAL F+++ + G +PD +++ V+ ACS+ +GR+ HGLA D
Sbjct: 321 EDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV-------HGLALKLD 373
Query: 530 HYT-------CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ ++ + + G L +AKTL + MP + + V + S++A H ++
Sbjct: 374 IPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 583 AKKLLEI--EPSN 593
+++LE+ P+N
Sbjct: 433 FQRMLEMGFTPTN 445
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 365/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ A L+ +C ++ +++HA K FAS I+ L+++YAKC + A F
Sbjct: 371 DSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF 430
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +NV WN + L+ +G +DD F
Sbjct: 431 LETEVENVVLWNVM---LVAYGLLDDLRNSFR---------------------------- 459
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E ++Y++ S L C D ++G Q+H+ + K+ + + Y+ S LIDMY
Sbjct: 460 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYA 519
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A + +++VSW ++I Y Q AL F +M+ GI DEV L +
Sbjct: 520 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 579
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VSACA L A KEG QIHA+ +DL NALV +Y+KCG
Sbjct: 580 AVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSKCG--------------- 623
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++ A L F + + ++WNAL++G+ Q+G NEEAL +F +
Sbjct: 624 ----------------NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMN 667
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE + ++TFG+ + A + A+++ G+Q H + K +G +S+ V N++I MY
Sbjct: 668 REGIDSNNFTFGSAVKAASETANMKQGKQVHAVITK------TGYDSETEVCNAIISMYA 721
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ D + F + ++ VSWNAMI +++G+G+EAL F +M+ +P+HVT++G
Sbjct: 722 KCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 781
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV++G +YF SM+ E+GLAP +HY C+VD+L RAG L AK I MP++
Sbjct: 782 VLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIE 841
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA++W +LL+AC VH+N+ +GE+ A LLE+EP +S YVLLSN+YA +W R
Sbjct: 842 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTR 901
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ M+++GV K+PG SWIE+ ++ F V D+ HPL EI+ K LT+ +GYV +
Sbjct: 902 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQD 959
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/554 (27%), Positives = 255/554 (46%), Gaps = 74/554 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVS--DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+ F+ +L++C R SV+ ++HARII + N LID+Y++ G
Sbjct: 168 NEGTFSGVLEAC-RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNG------- 219
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F+D A R+F + +D SW +M+SG ++++ EA
Sbjct: 220 ------------------------FVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEA 255
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M+ + Y+F S LSAC ++G Q+H L+ K +SSD Y+ +AL+ +
Sbjct: 256 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 315
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y G + A +F M +R+ V++N+LI Q G A+E+F RM G+EPD TL
Sbjct: 316 YFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTL 375
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AS+V AC+S G Q+HA + ND + G AL+++YAKC + A F
Sbjct: 376 ASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG-ALLNLYAKCSDIETALNYFLETE 434
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ N VV WN ++ Y + + +FR
Sbjct: 435 VEN-------------------------------VVLWNVMLVAYGLLDDLRNSFRIFRQ 463
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ E + P YT+ ++L C L DL+LG Q H+ ++K + + +V + LIDM
Sbjct: 464 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL------NAYVCSVLIDM 517
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y K G ++ I +D VSW MI G Q + +AL F++ML G + D V +
Sbjct: 518 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 577
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ AC+ ++EG++ + + G + +V L + G ++EA E
Sbjct: 578 TNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636
Query: 556 MQPDAVIWGSLLAA 569
D + W +L++
Sbjct: 637 -AGDNIAWNALVSG 649
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 256/550 (46%), Gaps = 79/550 (14%)
Query: 25 LLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL+ CL++ S+ + R++H++I+K F + + +L+D Y G L GA KVFD+M +
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPER 132
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+FTWN +I L ASR S+ + C + MV
Sbjct: 133 TIFTWNKMIKEL--------ASR---SLSGKVFCLFGRMV-------------------- 161
Query: 144 SENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+EN +E +F L AC GSV F + Q+HA + + + LID+Y + G V
Sbjct: 162 NENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFV 221
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
ARRVFDG+ ++ SW ++I+ +N +A+ +F M GI P +SV+SAC
Sbjct: 222 DRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSAC 281
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ + + G Q+H +++ +D + NALV +Y G L A +F M R+ V
Sbjct: 282 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAV-- 338
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++N LI G +Q G E+A+ LF+ ++ + +
Sbjct: 339 -----------------------------TYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P T +L+ AC++ L G+Q H + K G F S ++ + +L+++Y KC +
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLG--FASNDK----IEGALLNLYAKCSDI 423
Query: 443 EDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
E F ET VE + V WN M+V + +F++M + P+ T +L
Sbjct: 424 ETALNYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 482
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPD 559
C G +E G + S + K + + Y C ++D+ + G LD A ++ + D
Sbjct: 483 CIRLGDLELGEQIHSQIIKT---SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 538
Query: 560 AVIWGSLLAA 569
V W +++A
Sbjct: 539 VVSWTTMIAG 548
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/682 (36%), Positives = 371/682 (54%), Gaps = 78/682 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C+ S+ D ++VH + K F ++F+ L+ +Y++
Sbjct: 123 DFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSR----------- 168
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+G +D A ++F MP +D SWN+M+SGF Q+ + ALG
Sbjct: 169 --------------------YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M E + + S L CA S D G +H + K SDV++ +ALI+MY
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K GR+ A+ VFD M R++VSWNS+I YEQN S AL F M GI PD +T+ S
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S + L+ + I ++R E L D+V+GNALV+MYAK
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKL---------------- 372
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
GY + A +F ++ ++ +SWN L+ GYTQNG EA+ + +++
Sbjct: 373 ----------GY-----MNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 378 --RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
R+++ P T+ +++ A +++ LQ G + H ++K+ L D+FV LID+
Sbjct: 418 ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL------DVFVATCLIDL 470
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG +ED +F + V WNA+I +G G EAL LFK ML K DH+T
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSH+GLV+EG+K F M KE+G+ P HY CMVDLLGRAG L++A L+ MP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+QPDA IWG+LL+ACK++ N LG + +LLE++ N G YVLLSN+YA +W V++
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VR L R RG+ K PG S + + VF ++ HP EIY LK+L+ +MK +GYVP+
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710
Query: 676 AS----DDEAYEEQNGSNSTSD 693
S D E E++ NS S+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSE 732
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 203/420 (48%), Gaps = 49/420 (11%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F + ++C V+ ++HALL S ++ + + LI++Y G +S +R FD +
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 214 ERNIVSWNSLITCYEQNGPASDAL----EVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
++NI SWNS+I+ Y + G +A+ ++F + PD T ++ AC SL
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV--- 138
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
+G ++H + + +D+ + +LV +Y++ G L+ A VF MP+++V S
Sbjct: 139 DGKKVHCCVFKM-GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-------- 189
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
WNA+I+G+ QNG ALG+ +K E V T
Sbjct: 190 -----------------------WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++L CA D+ G H HV+KHGL +SD+FV N+LI+MY K G ++D +F
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGL------DSDVFVSNALINMYSKFGRLQDAQMVF 280
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M RD VSWN++I QN + AL FK M L G +PD +T++ + S
Sbjct: 281 DQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQR 340
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R + + L +V++ + G ++ A T+ + +P + D + W +L+
Sbjct: 341 ISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTG 399
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 222/477 (46%), Gaps = 87/477 (18%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
G+ +D+ A +L C +S V + +H ++K S++F+ N LI++Y+K G L
Sbjct: 215 GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQ 274
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A+ VFD+M +++ +WNSII + + Q++
Sbjct: 275 DAQMVFDQMEVRDLVSWNSII-------------------------------AAYEQNND 303
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGS 190
S AL +F M + S S + D ++ + + + + DV +G+
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GI 248
AL++MY K G ++CA VFD + ++ +SWN+L+T Y QNG AS+A++ + MM
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDT 422
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P++ T S++ A + + A ++G++IHA+L++ L D+ + L+D+Y KCG+L +A
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIK-NSLYLDVFVATCLIDLYGKCGRLEDAM 481
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +P +TS V WNA+IA +G EE
Sbjct: 482 SLFYEIP-----RDTS--------------------------VPWNAIIASLGIHGRGEE 510
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
AL LF+ + E V H TF +LL+AC +H+ +V G + + + +
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSAC-----------SHSGLVDEGQKCFDIMQKEYGI 559
Query: 429 GNSL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALG 478
SL +D+ + G +E + M ++ D W A++ C YG LG
Sbjct: 560 KPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI--YGNAELG 614
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/659 (37%), Positives = 366/659 (55%), Gaps = 69/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C ++ ++H+ IK+ +++I ++ L+D+Y+KC + A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+N+ W N M+ + Q D S++
Sbjct: 421 LTTETENIVLW-------------------------------NVMLVAYGQLDNLSDSFE 449
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E +++++ S L C +G Q+H + K+ + +VY+ S LIDMY
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G+++ A R+ + E ++VSW ++I Y Q+ S+AL++F M GI+ D + AS
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A ++G QIHA+ DL + NAL+ +YA+CG++ E
Sbjct: 570 AISACAGIRALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQE----------- 617
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A L F K+ ++N +SWN+L++G Q+G EEAL +F +
Sbjct: 618 --------------------AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R +T+G+ ++A A+LA+++ G+Q H+ V+K +G +S+ V NSLI +Y
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK------TGYDSEREVSNSLISLYA 711
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K GS+ D R F M ER+ +SWNAMI G +Q+G G EAL LF++M +CG P+HVT +G
Sbjct: 712 KSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVG 771
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV+EG YF SM K H L P +HY C+VDLLGRAG LD A I+ MP+
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DA+IW +LL+AC +H+NI +GE A LLE+EP +S YVL+SN+YA +W R
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
KLM+ RGV K+PG SWIE+ V+ F DK HPL +IY + L R +GYV ++
Sbjct: 892 KLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 265/549 (48%), Gaps = 72/549 (13%)
Query: 22 FAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
FA +L +C+ + + ++VH+R F S + N LID+Y+K G
Sbjct: 162 FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG------------ 209
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+I+ A ++F + +D +W +M+SG +Q+ EA+ F
Sbjct: 210 -------------------YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFC 250
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
MH+ + Y S LSA F++G Q+H L+ K + S+ Y+ + L+ +Y +
Sbjct: 251 DMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSR 310
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A R+F M R+ VS+NSLI+ Q G + ALE+F +M ++PD +T+AS++S
Sbjct: 311 KLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLS 370
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACAS+ A +G+Q+H+ ++ + D++L +L+D+Y+KC
Sbjct: 371 ACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKC------------------- 410
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ V++A F N+V WN ++ Y Q ++ +FR ++ E
Sbjct: 411 ------------ADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T+ ++L C +L L LG Q HTHV+K G + +++V + LIDMY K G
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL------NVYVCSVLIDMYAKYG 512
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ RI + E D VSW AMI G Q+ +EAL LF++M G + D++ +
Sbjct: 513 QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAIS 572
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+ + +G++ + S G ++ L R G + EA E + +
Sbjct: 573 ACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNN 630
Query: 561 VIWGSLLAA 569
+ W SL++
Sbjct: 631 ISWNSLVSG 639
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 259/552 (46%), Gaps = 76/552 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL+ CL S S+ +T R+H RI KS F E + + L+D Y + G +GA KVFD+ SN++
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
VF SWN M+ F + F +M +
Sbjct: 124 VF-------------------------------SWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 145 ENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E + Y+F L AC G + F QVH+ + S + + LID+Y K G +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A++VF+ + ++IV+W ++I+ QNG +A+ +F M AS I P L+SV+SA
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ F+ G Q+H +++ ++ + N LV +Y++ KL A +F M R+ VS
Sbjct: 273 KIQLFELGEQLHCLVIKW-GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYN 331
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++S G Q G ++ AL LF ++R+ + P
Sbjct: 332 SLIS-------------------------------GLVQQGFSDRALELFTKMQRDCLKP 360
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL+ACA++ L G Q H+H +K G+ +DI + SL+D+Y KC VE
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGM------SADIILEGSLLDLYSKCADVE 414
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ F T + V WN M+V Q +++ +F++M + G P+ T +L C+
Sbjct: 415 TAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
G + G + + + K G + Y C ++D+ + G L A ++ +P + D V
Sbjct: 475 SLGALYLGEQIHTHVIKT-GFQL--NVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVV 530
Query: 562 IWGSLLAACKVH 573
W +++A H
Sbjct: 531 SWTAMIAGYVQH 542
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 222/505 (43%), Gaps = 75/505 (14%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L C S ++H +SKS + + + +L+D Y + G A +VFD R++
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSV 124
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHA 276
SWN +I + +F RM+A GI P+ T A V+ AC AF Q+H+
Sbjct: 125 FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHS 184
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R + LV N L+D+Y+K G + A+ VF+ + ++++V+ +M+S
Sbjct: 185 RTFYYGFDSSPLV-ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS--------- 234
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
G +QNG EEA+ LF + + PT Y ++L+A
Sbjct: 235 ----------------------GLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ +LG Q H V+K G S+ +V N L+ +Y + + RIF TM RD
Sbjct: 273 KIQLFELGEQLHCLVIKWGFH------SETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VS+N++I G Q G+ AL LF KM KPD +T+ +L AC+ G + +G + S
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 517 -----SMSKEHGL-APLKDHYTCMVDL------------------------LGRAGCLDE 546
MS + L L D Y+ D+ G+ L +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSD 446
Query: 547 AKTLIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV--LLS 601
+ + M M+ P+ + S+L C + LGE + +++ YV +L
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLI 505
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVV 626
+MYA+ G+ +R+ + + + VV
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVV 530
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/655 (35%), Positives = 359/655 (54%), Gaps = 69/655 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C S ++ + VH+ I+ + FI L+D+Y+KCG
Sbjct: 333 LSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCG------------- 379
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DA ++F + + D SW+++++ Q + EA F +
Sbjct: 380 ------------------LAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKR 421
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++++ S +SA D G +HA + K + D + +AL+ MY K G
Sbjct: 422 MRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGS 481
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V RVF+ R+++SWN+L++ + N L +F +M+A G P+ T S++ +
Sbjct: 482 VQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRS 541
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+SL+ G Q+HA++++ ND V G ALVDMYA
Sbjct: 542 CSSLSDVDLGKQVHAQIVKNSLDGNDFV-GTALVDMYA---------------------- 578
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
K ++ A +F ++++R++ +W ++AGY Q+G+ E+A+ F ++RE V
Sbjct: 579 ---------KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +T + L+ C+ +A L GRQ H+ +K +G+ D+FV ++L+DMY KCG
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIK------AGQSGDMFVASALVDMYAKCGC 683
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VED +F+ +V RD VSWN +I G +Q+G G +AL F+ ML G PD VT IGVL A
Sbjct: 684 VEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSA 743
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GL+EEG+K+F+S+SK +G+ P +HY CMVD+LGRAG E ++ IE M + + +
Sbjct: 744 CSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVL 803
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW ++L ACK+H NI GE A KL E+EP Y+LLSNM+A G W +V VR LM
Sbjct: 804 IWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMS 863
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RGV K+PGCSW+E+ G V+VF+ D HP +EI+L L+ L +++ VGY PN
Sbjct: 864 TRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNT 918
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 169/550 (30%), Positives = 274/550 (49%), Gaps = 75/550 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C +++ + +H ++IKS + + N L++VYAKCG A KVF ++
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +W ++ITG + G+ S A+ F +
Sbjct: 191 ERDVVSWTALITGFVAEGY-------------------------------GSGAVNLFCE 219
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E +E+++ +AL AC+ +D + G QVHA K SD+++GSAL+D+Y KCG
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGE 279
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A RVF M ++N VSWN+L+ + Q G A L +F RM S I + TL++V+
Sbjct: 280 MVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKG 339
Query: 262 CASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
CA+ + G +H+ +R CE D + LVDMY+KCG +A VF R+
Sbjct: 340 CANSGNLRAGQIVHSLAIRIGCEL---DEFISCCLVDMYSKCGLAGDALKVFVRIE---- 392
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ +VVSW+A+I Q G++ EA +F+ ++
Sbjct: 393 ---------------------------DPDVVSWSAIITCLDQKGQSREAAEVFKRMRHS 425
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P +T +L++A +L DL G H V K+G E D V N+L+ MYMK
Sbjct: 426 GVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGF------EYDNTVCNALVTMYMKI 479
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GSV+DGCR+FE RD +SWNA++ G N L +F +ML G P+ T I +L
Sbjct: 480 GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
+CS V+ G++ + + K + L T +VD+ + L++A+T+ + ++ D
Sbjct: 540 RSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRD 597
Query: 560 AVIWGSLLAA 569
W ++A
Sbjct: 598 LFAWTVIVAG 607
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 237/508 (46%), Gaps = 54/508 (10%)
Query: 96 LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFG 155
L+ GF S+L S P R + + + + R L + K L +YS
Sbjct: 82 LQDGFQKTPSKL--SSPNRPNSTPGNKIPETVEKKRIWRGLDFDSKGR-----LRQYS-- 132
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
L CA D G +H + KS + D ++ ++L+++Y KCG + A +VF + ER
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 192
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++VSW +LIT + G S A+ +F M G+E +E T A+ + AC+ + G Q+H
Sbjct: 193 DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVH 252
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A ++ +DL +G+ALVD+YAKCG++ A VF MP +N VS ++++G+A
Sbjct: 253 AEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA----- 306
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
Q G+ E+ L LF + + + +T +L C
Sbjct: 307 --------------------------QMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGC 340
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
AN +L+ G+ H+ ++ G E D F+ L+DMY KCG D ++F + +
Sbjct: 341 ANSGNLRAGQIVHSLAIRIGC------ELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW+A+I Q G EA +FK+M G P+ T+ ++ A + G + G
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454
Query: 516 SSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + K +G D+ C +V + + G + + + EA + D + W +LL+ +
Sbjct: 455 ACVCK-YGFE--YDNTVCNALVTMYMKIGSVQDGCRVFEATTNR-DLISWNALLSGFHDN 510
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G + ++L E N Y +S
Sbjct: 511 ETCDTGLRIFNQMLA-EGFNPNMYTFIS 537
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/657 (36%), Positives = 365/657 (55%), Gaps = 39/657 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L C + + + +VH ++K ++FIQN LI YA+CG
Sbjct: 134 FPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECG------------- 180
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+D ++F M ER+ SW S++ G+A+ DR EA+ F +
Sbjct: 181 ------------------HMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFE 222
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S + +SACA D MG +V A + + + M +AL+DMY KCG
Sbjct: 223 MVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGA 282
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A+R+FD +RN+V +N++++ Y + G A +AL + M+ G PD VT+ S +SA
Sbjct: 283 IDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A L G H ++R L +GN ++DMY KCGK A VFD M + VVS
Sbjct: 343 SAQLVDLFYGKVCHGYVIR-NGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVS 401
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S+ +G+ + V+SA +F ++ ERN V WN +I+G Q E+A+ LFR ++ E +
Sbjct: 402 WNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI 461
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T + +AC L +L + HT++ K+G+ D+ + +L+DM+ +CG
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI------PCDMRLNTALVDMFARCGD 515
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ ++F M ERD +W A I A G G A GLF +ML+ G KPD V + VL A
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH G VE+G FS M ++HG++P +HY CMVDLLGRAG L EA LI++MPM+P+ V
Sbjct: 576 CSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 634
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WGSLLAAC+VH+N+ + Y A+++ E+ P +G +VLLSN+YA G+W +V RVR +R
Sbjct: 635 VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLR 694
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
++GV K PG S +++ G ++ F D+ HP I L+L+ + G++P+ S+
Sbjct: 695 EKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSN 751
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 224/487 (45%), Gaps = 71/487 (14%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
NS++ G++ EA+ +V+M + Y+F LS C F G QVH + K
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
DV++ + LI Y +CG + +VF+GM ERN+VSW SLI Y + +A+ +
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F M+ +GI P VT+ V+SACA L G ++ A + L+ + V+ NALVDMY
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGEL-GLKLNKVMVNALVDMYM 278
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG ++ A+ +FD RN+V +++S YA+ + A + +ML
Sbjct: 279 KCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEML------------- 325
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q G P T + ++A A L DL G+ H +V+++GL
Sbjct: 326 --QQGPR----------------PDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLE-- 365
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM--------------------------- 452
G +S +GN +IDMYMKCG E CR+F+ M
Sbjct: 366 -GWDS---IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEV 421
Query: 453 ----VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
ER+ V WN MI G Q +A+ LF++M G K D VTM+G+ AC + G
Sbjct: 422 FNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLG-A 480
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
E K+ + +++G+ T +VD+ R G A + M + D W + +
Sbjct: 481 PELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIG 539
Query: 569 ACKVHRN 575
+ N
Sbjct: 540 TMAMEGN 546
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/726 (34%), Positives = 382/726 (52%), Gaps = 109/726 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A ++ +C + V ++H +++S F ++++ LID Y+K G + AR V
Sbjct: 40 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLV----- 94
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F + E+ +W ++++G+ + R +L F +
Sbjct: 95 --------------------------FDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N Y S LSAC+ + G Q+HA + + DV + + LID Y KC R
Sbjct: 129 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R++FD M +NI+SW ++I+ Y QN +A+++F M G +PD SV+++
Sbjct: 189 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 248
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG------------------- 302
C SL A ++G Q+HA ++ N+ V N L+DMYAK
Sbjct: 249 CGSLEALEQGRQVHAYTIKANLESNEFV-KNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307
Query: 303 ------------KLNEARCVFDRMPIR--------------------------------- 317
KL+EA +F M +R
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 367
Query: 318 ------NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
++ + ++++ Y+K S VK AR +F +M E+++V WNA+ GYTQ+ ENEEAL
Sbjct: 368 KXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 427
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
L+ L+ P +TF L+ A +NLA L+ G+Q H +VK GL F FV N+
Sbjct: 428 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP------FVTNA 481
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KCGS+E+ ++F + + RD V WN+MI AQ+G EALG+F++M+ G +P+
Sbjct: 482 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 541
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+VT + VL ACSHAG VE+G +F+SM G+ P +HY C+V LLGR+G L EAK I
Sbjct: 542 YVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFI 600
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
E MP++P A++W SLL+AC++ N+ LG+Y A+ + +P +SG Y+LLSN++A G W
Sbjct: 601 EKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWA 660
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+V +VR M VVK+PG SWIE+ VNVF+ + H I VL +L + +K G
Sbjct: 661 DVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAG 720
Query: 672 YVPNAS 677
YVP+A+
Sbjct: 721 YVPDAT 726
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 242/511 (47%), Gaps = 80/511 (15%)
Query: 134 EALGYFVKMHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL FV + ++ +E+ S + AC + G Q+H + +S + DVY+G++L
Sbjct: 19 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
ID Y K G + AR VFD + E+ V+W ++I Y + G + +LE+F +M + + PD
Sbjct: 79 IDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDR 138
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
++SV+SAC+ L + G QIHA ++R D+ + N L+D Y KC ++ R +FD
Sbjct: 139 YVVSSVLSACSMLEFLEGGKQIHAYVLR-RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKM--------------------------- 345
+M ++N++S T+M+SGY + S A +F +M
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257
Query: 346 ------------LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC----------- 382
LE N N LI Y ++ +A +F ++ ++V
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317
Query: 383 --------------------PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
P+ TF +LL A+L L+L +Q H ++K G+
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL---- 373
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D+F G++LID+Y KC V+D +FE M E+D V WNAM G Q+ EAL L+
Sbjct: 374 --DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYST 431
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
+ +KP+ T ++ A S+ + G+++ + + K GL +VD+ + G
Sbjct: 432 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCG 490
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++EA+ + + + D V W S+++ H
Sbjct: 491 SIEEARKMFNS-SIWRDVVCWNSMISTHAQH 520
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 364 GENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G +EEAL +F L+R+S P + +++ AC L ++ G Q H VV+ SG
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVR------SGF 68
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ D++VG SLID Y K G +E +F+ ++E+ V+W +I G + G +L LF +
Sbjct: 69 DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
M PD + VL ACS +E G++
Sbjct: 129 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 159
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/653 (37%), Positives = 352/653 (53%), Gaps = 69/653 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +LD+C ++ + VHA+++ + F S+ I L+ +Y K G +
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSM----------- 209
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DDA ++F + RD ++N MV G+A+ + +A F +
Sbjct: 210 --------------------DDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYR 249
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++ SF S L C G VHA + D+ + ++LI MY CG
Sbjct: 250 MQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGS 309
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARRVFD M+ R++VSW +I Y +NG DA +F M GI+PD +T +++A
Sbjct: 310 IEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNA 369
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA A +IH+++ DL++ ALV M
Sbjct: 370 CAISANLNHAREIHSQV-DIAGFGTDLLVSTALVHM------------------------ 404
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
YAK ++K AR +F M R+VVSW+A+I Y +NG EA F L+KR ++
Sbjct: 405 -------YAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNI 457
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T+ NLLNAC +L L +G + +T +K L S + +GN+LI M K GS
Sbjct: 458 EPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL------VSHVPLGNALIIMNAKHGS 511
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE IF+TMV RD ++WNAMI G + +G EAL LF +ML +P+ VT +GVL A
Sbjct: 512 VERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSA 571
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS AG V+EGR++F+ + + G+ P Y CMVDLLGRAG LDEA+ LI++MP++P +
Sbjct: 572 CSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSS 631
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW SLL AC++H N+ + E A++ L I+P + YV LS+MYA G W V +VRK+M
Sbjct: 632 IWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVME 691
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RG+ K+ GC+WIE+ G V+ F+V+D+ HPL EIY L L +KR GY+P
Sbjct: 692 SRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIP 744
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/634 (29%), Positives = 309/634 (48%), Gaps = 91/634 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS + KL C + + ++V II+ I+ N LI +Y+ CG + AR++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD + NK V T WN++++G+AQ EA
Sbjct: 115 FDSVENKTVVT-------------------------------WNALIAGYAQVGHVKEAF 143
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E S +F S L AC+ G +VHA + + + SD +G+AL+ MY
Sbjct: 144 ALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMY 203
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + AR+VFDG+ R++ ++N ++ Y ++G A E+F RM G++P++++
Sbjct: 204 VKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFL 263
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ C + A G +HA+ M L +D+ + +L+ MY CG + AR VFD M +
Sbjct: 264 SILDGCWTPEALAWGKAVHAQCMNA-GLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKV 322
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+VVS T M+ GYA +NG E+A GLF +
Sbjct: 323 RDVVSWTVMIEGYA-------------------------------ENGNIEDAFGLFATM 351
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ E + P T+ +++NACA A+L R+ H+ V ++G +D+ V +L+ MY
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVD------IAGFGTDLLVSTALVHMY 405
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+++D ++F+ M RD VSW+AMI +NGYGTEA F M +PD VT I
Sbjct: 406 AKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYI 465
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEA 553
+L AC H G ++ G + ++ K A L H ++ + + G ++ A+ + +
Sbjct: 466 NLLNACGHLGALDVGMEIYTQAIK----ADLVSHVPLGNALIIMNAKHGSVERARYIFDT 521
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLLSNMYAELGRWG 611
M ++ D + W +++ +H N Y+ ++L+ P++ V + + R G
Sbjct: 522 M-VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNS----VTFVGVLSACSRAG 576
Query: 612 EVVRVRK----LMRKRGV---VKQPGCSWIEILG 638
V R+ L+ RG+ VK GC +++LG
Sbjct: 577 FVDEGRRFFTYLLEGRGIVPTVKLYGCM-VDLLG 609
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/682 (36%), Positives = 370/682 (54%), Gaps = 78/682 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C+ S+ D ++VH + K F ++F+ L+ +Y++
Sbjct: 123 DFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSR----------- 168
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+G +D A ++F MP +D SWN+M+SGF Q+ + ALG
Sbjct: 169 --------------------YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M E + + S L CA S D G +H + K SDV++ +ALI+MY
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K GR+ A+ VFD M R++VSWNS+I YEQN S AL F M GI PD +T+ S
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S + L+ + I ++R E L D+V+GNALV+MYA KL C
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA---KLGYMNC-------- 377
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A +F ++ ++ +SWN L+ GYTQNG EA+ + +++
Sbjct: 378 --------------------AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMME 417
Query: 378 --RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
R+++ P T+ +++ A +++ LQ G + H ++K+ L D+FV LID+
Sbjct: 418 ECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL------DVFVATCLIDL 470
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG +ED +F + V WNA+I +G G EAL LFK ML K DH+T
Sbjct: 471 YGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITF 530
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSH+GLV+EG+K F M KE+G+ P HY CMVDLLGRAG L++A L+ MP
Sbjct: 531 VSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP 590
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+QPDA IWG+LL+ACK++ N LG + +LLE++ N G YVLLSN+YA +W V++
Sbjct: 591 IQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIK 650
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VR L R RG+ K PG S + + VF ++ HP EIY LK+L+ +MK +GYVP+
Sbjct: 651 VRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPD 710
Query: 676 AS----DDEAYEEQNGSNSTSD 693
S D E E++ NS S+
Sbjct: 711 YSFVYQDIEEDEKEQILNSHSE 732
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 203/420 (48%), Gaps = 49/420 (11%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F + ++C V+ ++HALL S ++ + + LI++Y G +S +R FD +
Sbjct: 25 FNALFNSC---VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81
Query: 214 ERNIVSWNSLITCYEQNGPASDAL----EVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
++NI SWNS+I+ Y + G +A+ ++F + PD T ++ AC SL
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV--- 138
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
+G ++H + + +D+ + +LV +Y++ G L+ A VF MP+++V S
Sbjct: 139 DGKKVHCCVFKM-GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS-------- 189
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
WNA+I+G+ QNG ALG+ +K E V T
Sbjct: 190 -----------------------WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++L CA D+ G H HV+KHGL +SD+FV N+LI+MY K G ++D +F
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGL------DSDVFVSNALINMYSKFGRLQDAQMVF 280
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M RD VSWN++I QN + AL FK M L G +PD +T++ + S
Sbjct: 281 DQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQR 340
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R + + L +V++ + G ++ A T+ + +P + D + W +L+
Sbjct: 341 ISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTG 399
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 220/472 (46%), Gaps = 87/472 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D+ A +L C +S V + +H ++K S++F+ N LI++Y+K G L A+ V
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M +++ +WNSII + + Q++ S AL
Sbjct: 280 FDQMEVRDLVSWNSII-------------------------------AAYEQNNDPSTAL 308
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDM 195
+F M + S S + D ++ + + + + DV +G+AL++M
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GIEPDEV 253
Y K G ++CA VFD + ++ +SWN+L+T Y QNG AS+A++ + MM P++
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQG 427
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S++ A + + A ++G++IHA+L++ L D+ + L+D+Y KCG+L +A +F
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIK-NSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P +TS V WNA+IA +G EEAL LF
Sbjct: 487 IP-----RDTS--------------------------VPWNAIIASLGIHGRGEEALQLF 515
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL- 432
+ + E V H TF +LL+AC +H+ +V G + + + + SL
Sbjct: 516 KDMLAERVKADHITFVSLLSAC-----------SHSGLVDEGQKCFDIMQKEYGIKPSLK 564
Query: 433 -----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALG 478
+D+ + G +E + M ++ D W A++ C YG LG
Sbjct: 565 HYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKI--YGNAELG 614
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/671 (34%), Positives = 371/671 (55%), Gaps = 70/671 (10%)
Query: 19 SSP-FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S P +A SC ++ R++HA IK++F+S+ + ++DVYAK L
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSL------- 301
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA R F +P + N+M+ G + EA+G
Sbjct: 302 ------------------------TDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + S SACA + + G QVH L KS + D+ + +A++D+YG
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A +F GM++++ VSWN++I EQNG D + F M+ G++PD+ T S
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA+L + + GL +H ++++ L +D + + +VDMY KCG ++EA+ + DR
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR---- 512
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ G + VVSWNA+++G++ N E+EEA F +
Sbjct: 513 --------IGG-------------------QQVVSWNAILSGFSLNKESEEAQKFFSEML 545
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P H+TF +L+ CANLA ++LG+Q H ++K + D ++ ++L+DMY
Sbjct: 546 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEML------DDEYISSTLVDMYA 599
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + D +FE + +RD+VSWNAMI G A +G G EAL +F++M P+H T +
Sbjct: 600 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 659
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GL ++G +YF M+ + L P +H+ CMVD+LGR+ EA I +MP Q
Sbjct: 660 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 719
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DAVIW +LL+ CK+ +++ + E A +L ++P +S Y+LLSN+YAE G+W +V R R
Sbjct: 720 ADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTR 779
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+L+++ + K+PGCSWIE+ ++ F+V DK HP + E+Y +L L EMK GY P+++
Sbjct: 780 RLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSA 839
Query: 678 DDEAYEEQNGS 688
+E+ +
Sbjct: 840 SFVEVDEEGSA 850
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 208/692 (30%), Positives = 326/692 (47%), Gaps = 94/692 (13%)
Query: 22 FAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
F+++ SC ++ ++++ R HAR++ S F F+ N L+ +YA+C AR+VFD
Sbjct: 18 FSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDA 77
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M ++ +WN+++T G I A LF MP+ D SWN++VSG+ Q F E++ F
Sbjct: 78 MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 137
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V+M + +F L +C+ + +G QVHAL K+ DV GSAL+DMYGKC
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 197
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ A F GM ERN VSW + I QN LE+F+ M G+ + + AS
Sbjct: 198 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAF 257
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+CA+++ G Q+HA ++ K +D V+G A+VD+YAK L +AR F +P N
Sbjct: 258 RSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP--NH 314
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
ETS NA++ G + G EA+GLF+ + R
Sbjct: 315 TVETS-----------------------------NAMMVGLVRAGLGIEAMGLFQFMIRS 345
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
S+ + + +ACA G+Q H +K SG + DI V N+++D+Y KC
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK------SGFDVDICVNNAVLDLYGKC 399
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ + IF+ M ++D VSWNA+I QNG+ + + F +ML G KPD T VL
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE------- 552
AC+ +E G + K GL + +VD+ + G +DEA+ L +
Sbjct: 460 KACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518
Query: 553 ---------------------------AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
M ++PD + ++L C I LG+ + +
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 586 LLEIEPSNSGPYV--LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
+++ E + Y+ L +MYA+ G + + V + + KR V SW N
Sbjct: 579 IIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV-----SW-------NAM 625
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ H L E L+M R M++ VPN
Sbjct: 626 ICGYALHGLGVE---ALRMFER-MQKENVVPN 653
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 269/558 (48%), Gaps = 75/558 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA LL SC + +S +VHA +K+ ++ + L+D+Y KC L A F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +N W SW + ++G Q++++ L
Sbjct: 208 YGMPERN---W----------------------------VSWGAAIAGCVQNEQYVRGLE 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M +S+ S+ SA +CA G Q+HA K+++SSD +G+A++D+Y
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K ++ ARR F G+ + + N+++ + G +A+ +F M+ S I D V+L+
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 356
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V SACA + +G Q+H ++ D+ + NA++D+Y KC L E
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIK-SGFDVDICVNNAVLDLYGKCKALME----------- 404
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A L+F M +++ VSWNA+IA QNG ++ + F +
Sbjct: 405 --------------------AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 444
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P +T+G++L ACA L L+ G H V+K GL SD FV ++++DMY
Sbjct: 445 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG------SDAFVASTVVDMYC 498
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +++ ++ + + + VSWNA++ G + N EA F +ML G KPDH T
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + K+ L D Y + +VD+ + G + ++ + E +
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQE---MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 615
Query: 556 MQPDAVIWGSLLAACKVH 573
+ D V W +++ +H
Sbjct: 616 KR-DFVSWNAMICGYALH 632
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C +S+ VH ++IKS S+ F+ + ++D+Y KCG + A+K+
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ + V +WN+I+ SGF+ + EA
Sbjct: 511 DRIGGQQVVSWNAIL-------------------------------SGFSLNKESEEAQK 539
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M ++F + L CA ++G Q+H + K D Y+ S L+DMY
Sbjct: 540 FFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYA 599
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + VF+ + +R+ VSWN++I Y +G +AL +F RM + P+ T +
Sbjct: 600 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 659
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ + F +G + + KL L +VD+ + EA + MP +
Sbjct: 660 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 719
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA +LD+C ++ +++H +IIK + + +I + L+D+YAKCG + + VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K+ ++ +WN++I G+A H EAL
Sbjct: 612 EKVEKRDFVSWNAMIC-------------------------------GYALHGLGVEALR 640
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMY 196
F +M EN + +F + L AC+ F G + H + + + + + ++D+
Sbjct: 641 MFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDIL 700
Query: 197 GKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
G+ A + + M + + V W +L++
Sbjct: 701 GRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/687 (34%), Positives = 374/687 (54%), Gaps = 73/687 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIF-IQNRLIDVYAKCGCLYGARK 75
LD A+ L SC S+ R +H +KS + I NRL+ +Y++C + A++
Sbjct: 4 LDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 76 VFDKMSNKNVFTWNSIITGLLK---------------------W----------GFIDDA 104
+F++M +N F+WN++I G LK W G ++ A
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVA 123
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS---ENFALSEYSFGSALSAC 161
RLF MP ++ +WNSM+ G+A + R EA+G F + E F + + + AC
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN----- 216
G Q+HA + D +GS+L+++YGKCG + A V + M+E +
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 217 --------------------------IVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+V WNS+I+ Y N A +ALE+F M G++
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D T ASV+SAC++L +G+Q+HA + + ND+++ +ALVDMY+KC + ++A +
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKV-GFTNDIIIDSALVDMYSKCRRPDDACKL 362
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F + + + SM++ Y+ + AR +F M ++++SWN++I G++QN EAL
Sbjct: 363 FSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEAL 422
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF + + + ++ +++ACA+++ L+LG Q GL F D +
Sbjct: 423 DLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEF------DQIIST 476
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SL+D Y KCG VE G ++F+ M++ D V WN+M++G A NG+G EAL +F +M G +P
Sbjct: 477 SLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQP 536
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+T +GVL AC H GLVEEGRK+F +M ++ + P +HY+CMVDL RAG L++A L
Sbjct: 537 TDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNL 596
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MP++ D +W S+L C H N +LG+ VAK++++++P NSG YV LS +YA W
Sbjct: 597 IEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDW 656
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEIL 637
G +VRKLM + + K PGCSW + L
Sbjct: 657 GRSAQVRKLMYDKKIPKVPGCSWADSL 683
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 71/329 (21%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++ D +LA + +C + + G +H ++ L + L +GN L+ MY++C + EA
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 308 RCVFDRMPIRNVVSETSM-------------------------------VSGYAKASSVK 336
+ +F+ MP RN S +M +SG+AK +++
Sbjct: 62 QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLE 121
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR---LLKRESVCPTHYTFGNLLN 393
AR +F +M +N ++WN++I GY NG +EA+GLF+ L E C + ++
Sbjct: 122 VARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVG 181
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC NL L G+Q H +V + F D +G+SL+++Y KCG ++ + M
Sbjct: 182 ACTNLGALDCGKQIHARIVVDEVEF------DSVLGSSLVNLYGKCGDIDSANHVLNLMK 235
Query: 454 ERDWVS-------------------------------WNAMIVGCAQNGYGTEALGLFKK 482
E D S WN+MI G N EAL LF
Sbjct: 236 EPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNN 295
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M G + D+ T VL ACS G++++G
Sbjct: 296 MRRKGVQEDYSTFASVLSACSTLGIIDQG 324
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/660 (35%), Positives = 367/660 (55%), Gaps = 70/660 (10%)
Query: 19 SSP-FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S P +A SC ++ R++HA IK++F+S+ + ++DVYAK L
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSL------- 301
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA R F +P + N+M+ G + EA+G
Sbjct: 302 ------------------------TDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + S SACA + + G QVH L KS + D+ + +A++D+YG
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 397
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A +F GM++++ VSWN++I EQNG D + F M+ G++PD+ T S
Sbjct: 398 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 457
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA+L + + GL +H ++++ L +D + + +VDMY KCG ++EA+ + DR
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR---- 512
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ G + VVSWNA+++G++ N E+EEA F +
Sbjct: 513 --------IGG-------------------QQVVSWNAILSGFSLNKESEEAQKFFSEML 545
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P H+TF +L+ CANLA ++LG+Q H ++K + D ++ ++L+DMY
Sbjct: 546 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEML------DDEYISSTLVDMYA 599
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + D +FE + +RD+VSWNAMI G A +G G EAL +F++M P+H T +
Sbjct: 600 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 659
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GL ++G +YF M+ + L P +H+ CMVD+LGR+ EA I +MP Q
Sbjct: 660 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 719
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DAVIW +LL+ CK+ +++ + E A +L ++P +S Y+LLSN+YAE G+W +V R R
Sbjct: 720 ADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTR 779
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+L+++ + K+PGCSWIE+ ++ F+V DK HP + E+Y +L L EMK GY P+++
Sbjct: 780 RLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSA 839
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 208/692 (30%), Positives = 326/692 (47%), Gaps = 94/692 (13%)
Query: 22 FAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
F+++ SC ++ ++++ R HAR++ S F F+ N L+ +YA+C AR+VFD
Sbjct: 18 FSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDA 77
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M ++ +WN+++T G I A LF MP+ D SWN++VSG+ Q F E++ F
Sbjct: 78 MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 137
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V+M + +F L +C+ + +G QVHAL K+ DV GSAL+DMYGKC
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 197
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ A F GM ERN VSW + I QN LE+F+ M G+ + + AS
Sbjct: 198 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAF 257
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+CA+++ G Q+HA ++ K +D V+G A+VD+YAK L +AR F +P N
Sbjct: 258 RSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP--NH 314
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
ETS NA++ G + G EA+GLF+ + R
Sbjct: 315 TVETS-----------------------------NAMMVGLVRAGLGIEAMGLFQFMIRS 345
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
S+ + + +ACA G+Q H +K SG + DI V N+++D+Y KC
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK------SGFDVDICVNNAVLDLYGKC 399
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ + IF+ M ++D VSWNA+I QNG+ + + F +ML G KPD T VL
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE------- 552
AC+ +E G + K GL + +VD+ + G +DEA+ L +
Sbjct: 460 KACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 518
Query: 553 ---------------------------AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
M ++PD + ++L C I LG+ + +
Sbjct: 519 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 578
Query: 586 LLEIEPSNSGPYV--LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
+++ E + Y+ L +MYA+ G + + V + + KR V SW N
Sbjct: 579 IIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV-----SW-------NAM 625
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ H L E L+M R M++ VPN
Sbjct: 626 ICGYALHGLGVE---ALRMFER-MQKENVVPN 653
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 269/558 (48%), Gaps = 75/558 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA LL SC + +S +VHA +K+ ++ + L+D+Y KC L A F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +N W SW + ++G Q++++ L
Sbjct: 208 YGMPERN---W----------------------------VSWGAAIAGCVQNEQYVRGLE 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M +S+ S+ SA +CA G Q+HA K+++SSD +G+A++D+Y
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K ++ ARR F G+ + + N+++ + G +A+ +F M+ S I D V+L+
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 356
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V SACA + +G Q+H ++ D+ + NA++D+Y KC L E
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIK-SGFDVDICVNNAVLDLYGKCKALME----------- 404
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A L+F M +++ VSWNA+IA QNG ++ + F +
Sbjct: 405 --------------------AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 444
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P +T+G++L ACA L L+ G H V+K GL SD FV ++++DMY
Sbjct: 445 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLG------SDAFVASTVVDMYC 498
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +++ ++ + + + VSWNA++ G + N EA F +ML G KPDH T
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + K+ L D Y + +VD+ + G + ++ + E +
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQE---MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 615
Query: 556 MQPDAVIWGSLLAACKVH 573
+ D V W +++ +H
Sbjct: 616 KR-DFVSWNAMICGYALH 632
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C +S+ VH ++IKS S+ F+ + ++D+Y KCG + A+K+
Sbjct: 451 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 510
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ + V +WN+I+ SGF+ + EA
Sbjct: 511 DRIGGQQVVSWNAIL-------------------------------SGFSLNKESEEAQK 539
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M ++F + L CA ++G Q+H + K D Y+ S L+DMY
Sbjct: 540 FFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYA 599
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + VF+ + +R+ VSWN++I Y +G +AL +F RM + P+ T +
Sbjct: 600 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 659
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ + F +G + + KL L +VD+ + EA + MP +
Sbjct: 660 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 719
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA +LD+C ++ +++H +IIK + + +I + L+D+YAKCG + + VF
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 611
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K+ ++ +WN++I G+A H EAL
Sbjct: 612 EKVEKRDFVSWNAMIC-------------------------------GYALHGLGVEALR 640
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMY 196
F +M EN + +F + L AC+ F G + H + + + + + ++D+
Sbjct: 641 MFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDIL 700
Query: 197 GKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
G+ A + + M + + V W +L++
Sbjct: 701 GRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/673 (35%), Positives = 380/673 (56%), Gaps = 48/673 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F ++L SC+ +K + + +H +KS S ++ N I +Y+KC L A F++
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
NVF++N++I K I A LF +P+ D S+N++++ +A AL F +
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++F ++AC V + Q+H+L S + S V + ++L+ Y K G
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVG--LIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188
Query: 202 VSCARRVFDGMRE--RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ A VF+GM E R+ VSWNS+I Y Q+ AL ++ M+ G E D TLASV+
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK-LNEARCVFDRMPIRN 318
+ + + GLQ HA+ ++ +N V G+ L+DMYAKCG ++E+R VF+ + +
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNRHV-GSGLIDMYAKCGAGMSESRKVFEEICGSD 307
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGLFRLLK 377
+V +M+S GY+QN E + EAL FR ++
Sbjct: 308 LVVWNTMIS-------------------------------GYSQNKELSVEALECFRQMQ 336
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R P +F ++AC+NL+ G+Q H +K + + I V N+L+ MY
Sbjct: 337 RAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEI-----PSNQISVNNALVTMYS 391
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+++D ++F+ M + + V+ N++I G AQ+G GTE+L LF++ML P +T++
Sbjct: 392 KCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVS 451
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+H G VEEG+KYF+ M G+ P +HY+CM+DLLGRAG L EA+ LI+ MP
Sbjct: 452 ILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFS 511
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P + W +LL AC+ + N+ L E A + L++EP+N+ PY++L++MY+ +W E R+R
Sbjct: 512 PGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIR 571
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN-- 675
KLMR RG+ K+PGCSWIE+ V+VF+ +D HP KEI++ L + +MKR GYVP+
Sbjct: 572 KLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVR 631
Query: 676 ---ASDDEAYEEQ 685
DDE E++
Sbjct: 632 WAFVKDDETGEQE 644
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 16/433 (3%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
F+ + SF L +C + D G +H + KS S Y+ + I +Y KC ++ A
Sbjct: 3 QFSWTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTA 62
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
F+ E N+ S+N+LI Y + A +F ++ +PD V+ ++++A A
Sbjct: 63 HHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQI----PQPDLVSFNTLINAYADR 118
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS-ETS 324
L + + + + + G + + + + VS + S
Sbjct: 119 GDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNS 178
Query: 325 MVSGYAKASSVKSARLMFTKMLE--RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+++ Y+K ++ A ++F M E R+ VSWN++I Y Q+ +AL L+R +
Sbjct: 179 LLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFE 238
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS- 441
+T ++L + + DL G Q H +K G + VG+ LIDMY KCG+
Sbjct: 239 IDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGF------NKNRHVGSGLIDMYAKCGAG 292
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNG-YGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ + ++FE + D V WN MI G +QN EAL F++M G PD + + +
Sbjct: 293 MSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAIS 352
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACS+ +G+++ + K + +V + + G L +A+ L + MP Q +
Sbjct: 353 ACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNT 411
Query: 561 VIWGSLLAACKVH 573
V S++A H
Sbjct: 412 VTLNSIIAGYAQH 424
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 179/372 (48%), Gaps = 38/372 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-LYGARK 75
+D A +L + + +S + HA+ IK+ F + + LID+YAKCG + +RK
Sbjct: 239 IDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRK 298
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS-E 134
VF+++ ++ W N+M+SG++Q+ S E
Sbjct: 299 VFEEICGSDLVVW-------------------------------NTMISGYSQNKELSVE 327
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALI 193
AL F +M + + SF A+SAC+ G Q HAL KS S+ + + +AL+
Sbjct: 328 ALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALV 387
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KCG + AR++F M + N V+ NS+I Y Q+G +++L +F +M+A+ I P +
Sbjct: 388 TMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSI 447
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL S++SACA +EG + + + + + ++D+ + GKL+EA + D
Sbjct: 448 TLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDT 507
Query: 314 MPIRNVVSETSMVSG----YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
MP + + + G Y + A F ++ N V + L + Y+ + EEA
Sbjct: 508 MPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEA 567
Query: 370 LGLFRLLKRESV 381
+ +L++ +
Sbjct: 568 ARIRKLMRDRGI 579
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 54/280 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKV 76
D F + +C S S ++ HA +KS+ S +I + N L+ +Y+KCG L ARK+
Sbjct: 343 DDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKL 402
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M N T NSII +G+AQH +E+L
Sbjct: 403 FQRMPQHNTVTLNSII-------------------------------AGYAQHGIGTESL 431
Query: 137 GYFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMG 189
F +M + + A + + S LSACA G F M + + ++ +
Sbjct: 432 NLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY------ 485
Query: 190 SALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGP---ASDALEVFVRMMA 245
S +ID+ G+ G++S A R+ D M +W +L+ + G A A F+++
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ P + LAS+ SA ++E +I +LMR +R
Sbjct: 546 TNAVP-YIMLASMYSAARK---WEEAARIR-KLMRDRGIR 580
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/663 (35%), Positives = 359/663 (54%), Gaps = 69/663 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + R +H +I + F S +F ++++YAKC R+
Sbjct: 145 FTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKC------RQ------ 192
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I+DA ++F MP+RD SWN++V+G+AQ+ A+ ++
Sbjct: 193 -------------------IEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQ 233
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + S L A A ++G +H ++ + V + +A++D Y KCG
Sbjct: 234 MQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS 293
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR VF GM RN+VSWN++I Y QNG + +A F++M+ G+EP V++ + A
Sbjct: 294 VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHA 353
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+L + G +H RL+ +K+ D+ + N+L+ MY+KC +++ A V
Sbjct: 354 CANLGDLERGRYVH-RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASV----------- 401
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F + + VV+WNA+I GY QNG EAL LF ++ +
Sbjct: 402 --------------------FGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDI 441
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +T +++ A LADL + RQA HGL + + ++FV +LID + KCG+
Sbjct: 442 KPDSFTLVSVITA---LADLSVTRQAKW---IHGLAIRTLMDKNVFVCTALIDTHAKCGA 495
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++ ++F+ M ER ++WNAMI G NG+G EAL LF +M KP+ +T + V+ A
Sbjct: 496 IQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA 555
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+GLVEEG YF SM + +GL P DHY MVDLLGRAG LD+A I+ MP++P
Sbjct: 556 CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+ G++L AC++H+N+ LGE A +L +++P + G +VLL+NMYA W +V RVR M
Sbjct: 616 VLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAME 675
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEA 681
K+G+ K PGCS +E+ V+ F HP +K IY L+ L EMK GYVP+ +
Sbjct: 676 KKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIHD 735
Query: 682 YEE 684
EE
Sbjct: 736 VEE 738
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 305/663 (46%), Gaps = 135/663 (20%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P A LL+ C S+ + ++ IIK+ F +E Q +LI ++ K
Sbjct: 46 PSAILLELC---TSLKELHQILPLIIKNGFYNEHLFQTKLISLFCK-------------- 88
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+NSI +A+R+F + + +++M+ G+A++ +A+ ++
Sbjct: 89 -------FNSIT----------EAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYE 131
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + Y F L ++D + G ++H ++ + + S+++ +A++++Y KC
Sbjct: 132 RMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCR 191
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A ++F+ M +R++VSWN+++ Y QNG A A++V ++M +G +PD +TL SV+
Sbjct: 192 QIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLP 251
Query: 261 ACASLAAFKEGLQIHARLMRC--EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
A A L A + G IH R E + N + A++D Y KCG + AR VF M RN
Sbjct: 252 AVADLKALRIGRSIHGYAFRAGFEYMVN---VATAMLDTYFKCGSVRSARLVFKGMSSRN 308
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
VVS +M+ GYA+ + A F KML+
Sbjct: 309 VVSWNTMIDGYAQNGESEEAFATFLKMLD------------------------------- 337
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E V PT+ + L+ACANL DL+ GR H + + + F D+ V NSLI MY K
Sbjct: 338 EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF------DVSVMNSLISMYSK 391
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
C V+ +F + + V+WNAMI+G AQNG EAL LF +M KPD T++ V
Sbjct: 392 CKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSV 451
Query: 499 LCAC---------------------------------SHA--GLVEEGRKYFSSMSKEHG 523
+ A +HA G ++ RK F M + H
Sbjct: 452 ITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHV 511
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGE 580
+ + M+D G G EA L M ++P+ + + S++AAC + G
Sbjct: 512 IT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGM 566
Query: 581 YVAKKLLE---IEPS--NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
Y + + E +EP+ + G V L LGR G + K ++ V +PG I
Sbjct: 567 YYFESMKENYGLEPTMDHYGAMVDL------LGRAGRLDDAWKFIQDMPV--KPG---IT 615
Query: 636 ILG 638
+LG
Sbjct: 616 VLG 618
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 207/457 (45%), Gaps = 81/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS +L + K++ R +H ++ F + + ++D Y KCG + AR VF
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF 301
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
MS++NV +WN +M+ G+AQ+ EA
Sbjct: 302 KGMSSRNVVSWN-------------------------------TMIDGYAQNGESEEAFA 330
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F+KM E + S AL ACA D + G VH LL + + DV + ++LI MY
Sbjct: 331 TFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC RV A VF ++ + +V+WN++I Y QNG ++AL +F M + I+PD TL S
Sbjct: 391 KCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVS 450
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++A A L+ ++ IH +R +N V AL+D +AKCG + AR +FD M R
Sbjct: 451 VITALADLSVTRQAKWIHGLAIRTLMDKNVFVC-TALIDTHAKCGAIQTARKLFDLMQER 509
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V++ +M+ GY NG EAL LF ++
Sbjct: 510 HVITWNAMIDGYGT-------------------------------NGHGREALDLFNEMQ 538
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS------GEESDIFVGNS 431
SV P TF +++ AC +H+ +V+ G+ + G E + +
Sbjct: 539 NGSVKPNEITFLSVIAAC-----------SHSGLVEEGMYYFESMKENYGLEPTMDHYGA 587
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGC 467
++D+ + G ++D + + M + ++ AM+ C
Sbjct: 588 MVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGAC 624
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 385/673 (57%), Gaps = 52/673 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDKMSN 82
L+D C S+ ++ HA +I++ S+ + ++L + A L ARKVFD++
Sbjct: 37 LIDRC---SSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN--SMVSGFAQHDRFSEALGYFV 140
N FTWN++I R +AS P+ W MVS SE+ Y
Sbjct: 94 PNSFTWNTLI-------------RAYASGPDPVCSIWAFLDMVS--------SESQCYPN 132
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
K Y+F + A A +G +H + KS SDV++ ++LI Y CG
Sbjct: 133 K----------YTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCG 182
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF ++E+++VSWNS+I + Q G ALE+F +M + ++ VT+ V+S
Sbjct: 183 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 242
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA + + G ++ + + ++ +L L NA++DMY KCG + +A+ +FD M ++ V
Sbjct: 243 ACAKIRDLEFGRRVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 301
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK-RE 379
+ T+M+ GYA + ++AR + M ++++V+WNALI+ Y QNG+ EAL +F L+ ++
Sbjct: 302 TWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQK 361
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ T + L+ACA + L+LGR H+++ K+G++ + +V ++LI MY KC
Sbjct: 362 NIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKM------NFYVTSALIHMYSKC 415
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G +E +F ++ +RD W+AMI G A +G G+EA+ +F KM KP+ VT V
Sbjct: 416 GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVF 475
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACSH GLV+E F M +G+ P HY C+VD+LGR+G L++A IEAMP+ P
Sbjct: 476 CACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPS 535
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+WG+LL ACK+H N+ L E +LLE+EP N G +VLLSN+YA+ G+W V +RK
Sbjct: 536 TSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKH 595
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
MR G+ K+PGCS IEI G ++ F+ D HP+++++Y L + ++K GY P S
Sbjct: 596 MRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHV 655
Query: 678 ----DDEAYEEQN 686
++E +EQ+
Sbjct: 656 LQIIEEEEMKEQS 668
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 209/461 (45%), Gaps = 101/461 (21%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L+ + S+S + +H IKS S++F+ N LI Y CG L A KVF +
Sbjct: 136 FPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 195
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V +WNS+I G ++ G D A LF K
Sbjct: 196 EKDVVSWNSMINGFVQKGSPDKALELFK-------------------------------K 224
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE+ S + LSACA D + G +V + + ++R + ++ + +A++DMY KCG
Sbjct: 225 MESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGS 284
Query: 202 VSCARRVFDGMRE-------------------------------RNIVSWNSLITCYEQN 230
+ A+R+FD M E ++IV+WN+LI+ YEQN
Sbjct: 285 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQN 344
Query: 231 GPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G ++AL VF + + I+ +++TL S +SACA + A + G IH+ + + ++ +
Sbjct: 345 GKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKK-NGIKMNFY 403
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ +AL+ MY+KCG L +AR VF+ + R+V ++M+ G A A MF KM E N
Sbjct: 404 VTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEAN 463
Query: 350 V----VSWNALIAGYTQNGENEEALGLF-------------------------------- 373
V V++ + + G +EA LF
Sbjct: 464 VKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKA 523
Query: 374 -RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+ ++ + P+ +G LL AC A+L L A T +++
Sbjct: 524 VKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLE 564
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 46/204 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ L +C + ++ R +H+ I K+ ++ + LI +Y+KCG L AR+V
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREV 424
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ + ++VF W+++I GL A H SEA+
Sbjct: 425 FNSVEKRDVFVWSAMIGGL-------------------------------AMHGCGSEAV 453
Query: 137 GYFVKMHSENFALSEYSFGSALSACA--GSVD------FKMGTQVHALLSKSRYSSDVYM 188
F KM N + +F + AC+ G VD +KM + + Y
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHY------ 507
Query: 189 GSALIDMYGKCGRVSCARRVFDGM 212
+ ++D+ G+ G + A + + M
Sbjct: 508 -ACIVDVLGRSGYLEKAVKFIEAM 530
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/650 (34%), Positives = 363/650 (55%), Gaps = 69/650 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + L +C + SVS +H +K+ F + +F+ + L+D+Y
Sbjct: 66 MDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMY------------ 113
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+K G +D+ +F MP R+ SW ++++G + EAL
Sbjct: 114 -------------------MKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEAL 154
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
YF M + Y+F SAL ACA S G ++H K +++ ++ + L MY
Sbjct: 155 AYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMY 214
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG++ R+F+ M +R++VSW ++I Q G +A++ F RM + + P+E T A
Sbjct: 215 NKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFA 274
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+S CA+L + G Q+HA ++R L + L + N+++ MY+KC +L+ A VF +
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIR-RGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS- 332
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+++SW+ +I+GY Q G EEA +
Sbjct: 333 ------------------------------RRDIISWSTMISGYAQGGCGEEAFDYLSWM 362
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+RE P + F ++L+ C N+A L+ G+Q H HV+ GL E + V ++LI+MY
Sbjct: 363 RREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGL------EQNTMVQSALINMY 416
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+++ +IF+ + VSW AMI G A++GY EA+ LFKK+ G +PD VT I
Sbjct: 417 SKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFI 476
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL ACSHAGLV+ G YF+S+SK H + P KDHY CM+DLL RAG L++A+++I++MP
Sbjct: 477 AVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPF 536
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
Q D V+W +LL AC++H ++ G+ A+K+L+++P+ + ++ L+NMYA G+W E V
Sbjct: 537 QRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEV 596
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
RK+M+ +GVVK+PG SWI+ V+ F+ D+ HP + IY VL +L +
Sbjct: 597 RKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQ 646
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 235/520 (45%), Gaps = 80/520 (15%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE-NF 147
N ++ L+K G +++A +LF M +RD+ SW +++SG+ +EAL F KM E
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ + AL AC ++ G +H K+ + + V++GSAL+DMY K G+V
Sbjct: 65 HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF M RN+VSW ++I + G +AL F M + D T +S + ACA A
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 268 FKEGLQIHARLMRCEKLRNDLV----LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
G +IH C+ L+ + N L MY KCGKL+ +F+ M R+VVS
Sbjct: 185 LNYGREIH-----CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVS-- 237
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
W +I Q G+ E A+ FR ++ V P
Sbjct: 238 -----------------------------WTTIIMSNVQIGQEENAVKAFRRMRETDVSP 268
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+TF +++ CA L ++ G Q H HV++ GL + V NS++ MY KC ++
Sbjct: 269 NEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV------DSLSVANSIMAMYSKCWQLD 322
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+F+ + RD +SW+ MI G AQ G G EA M G +P+ VL C
Sbjct: 323 LASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCG 382
Query: 504 HAGLVEEGRKYFSSM----------------------------SKEHGLAPLKD--HYTC 533
+ ++E+G++ + + SK A + +T
Sbjct: 383 NMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTA 442
Query: 534 MVDLLGRAGCLDEAKTLIEAMP---MQPDAVIWGSLLAAC 570
M++ G EA L + +P ++PD+V + ++LAAC
Sbjct: 443 MINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAAC 482
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 24/305 (7%)
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFG 389
K + +AR +F KML+R+ +SW +I+GY EAL LF ++ + +
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
L AC + G H + VK + +FVG++L+DMYMK G V++GC +F
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFV------NSVFVGSALVDMYMKIGKVDEGCIVF 126
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M R+ VSW A+I G + GY EAL F M + D T L AC+ +G +
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALN 186
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
GR+ K+ G + + + + G LD L E+M Q D V W +++ +
Sbjct: 187 YGREIHCQTLKK-GFTAVSFVANTLATMYNKCGKLDYGLRLFESMT-QRDVVSWTTIIMS 244
Query: 570 CKVHRNIMLG--EYVAKKLLEIEPSNSGP----YVLLSNMYAELGR--WGEVVRVRKLMR 621
N+ +G E K + ++ P + + + A LGR WGE + +
Sbjct: 245 -----NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVI-- 297
Query: 622 KRGVV 626
+RG+V
Sbjct: 298 RRGLV 302
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 365/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ A L+ +C ++ +++HA K FAS I+ L+++YAKC + A F
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +NV WN + L+ +G +DD F
Sbjct: 408 LETEVENVVLWNVM---LVAYGLLDDLRNSFR---------------------------- 436
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E ++Y++ S L C D ++G Q+H+ + K+ + + Y+ S LIDMY
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 496
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A + +++VSW ++I Y Q AL F +M+ GI DEV L +
Sbjct: 497 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 556
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VSACA L A KEG QIHA+ +DL NALV +Y++CGK+ E+
Sbjct: 557 AVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIEESY--------- 606
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
L F + + ++WNAL++G+ Q+G NEEAL +F +
Sbjct: 607 ----------------------LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 644
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE + ++TFG+ + A + A+++ G+Q H + K +G +S+ V N+LI MY
Sbjct: 645 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK------TGYDSETEVCNALISMYA 698
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ D + F + ++ VSWNA+I +++G+G+EAL F +M+ +P+HVT++G
Sbjct: 699 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 758
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV++G YF SM+ E+GL+P +HY C+VD+L RAG L AK I+ MP++
Sbjct: 759 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 818
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA++W +LL+AC VH+N+ +GE+ A LLE+EP +S YVLLSN+YA +W R
Sbjct: 819 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 878
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ M+++GV K+PG SWIE+ ++ F V D+ HPL EI+ + LT+ +GYV +
Sbjct: 879 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 936
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 250/550 (45%), Gaps = 79/550 (14%)
Query: 25 LLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL+ CL++ S+ + R++H++I+K S + +L D Y G LYGA KVFD+M
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM--- 106
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
PER +WN M+ A + E G FV+M
Sbjct: 107 ----------------------------PERTIFTWNKMIKELASRNLIGEVFGLFVRMV 138
Query: 144 SENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
SEN +E +F L AC GSV F + Q+HA + + + LID+Y + G V
Sbjct: 139 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 198
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
ARRVFDG+R ++ SW ++I+ +N ++A+ +F M GI P +SV+SAC
Sbjct: 199 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 258
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ + + G Q+H +++ +D + NALV +Y G L A +F M R+ V+
Sbjct: 259 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT- 316
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+N LI G +Q G E+A+ LF+ + + +
Sbjct: 317 ------------------------------YNTLINGLSQCGYGEKAMELFKRMHLDGLE 346
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P T +L+ AC+ L G+Q H + K G S+ + +L+++Y KC +
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF------ASNNKIEGALLNLYAKCADI 400
Query: 443 EDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
E F ET VE + V WN M+V + +F++M + P+ T +L
Sbjct: 401 ETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPD 559
C G +E G + S + K + + Y C ++D+ + G LD A ++ + D
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 515
Query: 560 AVIWGSLLAA 569
V W +++A
Sbjct: 516 VVSWTTMIAG 525
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 83/494 (16%)
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
GS+D G ++H+ + K S+ + L D Y G + A +VFD M ER I +WN
Sbjct: 59 GSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 116
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHARLMRC 281
+I + +FVRM++ + P+E T + V+ AC AF QIHAR++
Sbjct: 117 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY- 175
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ LR+ V+ N L+D+Y++ G ++ AR VFD + +++ S
Sbjct: 176 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-------------------- 215
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
W A+I+G ++N EA+ LF + + PT Y F ++L+AC + L
Sbjct: 216 -----------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 264
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
++G Q H V+K G SD +V N+L+ +Y G++ IF M +RD V++N
Sbjct: 265 EIGEQLHGLVLKLGF------SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 318
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY------- 514
+I G +Q GYG +A+ LFK+M L G +PD T+ ++ ACS G + G++
Sbjct: 319 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 378
Query: 515 -FSSMSKEHGLAPLKDHYTCMVD---------------------LLGRAGCLDEAKT--- 549
F+S +K G L + Y D +L G LD+ +
Sbjct: 379 GFASNNKIEG--ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 436
Query: 550 LIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYA 605
+ M ++ P+ + S+L C ++ LGE + ++++ N+ +L +MYA
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 496
Query: 606 ELGR----WGEVVR 615
+LG+ W ++R
Sbjct: 497 KLGKLDTAWDILIR 510
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/686 (35%), Positives = 388/686 (56%), Gaps = 60/686 (8%)
Query: 39 RRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGL 95
R +HAR++ + S + RL+ +Y L +F ++ S+++
Sbjct: 42 RCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLF--RADPGPVAATSLVSAY 99
Query: 96 LKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL--SE 151
G + D++ F S+P RD N+M+S FA+ + A+ F + + + +L +
Sbjct: 100 AVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDD 159
Query: 152 YSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSALIDMYGKC---GRVSCAR 206
YSF S LSA D + TQ+H + K + + + +ALI +Y KC G AR
Sbjct: 160 YSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDAR 219
Query: 207 RVFDGMRERN-------------------------------IVSWNSLITCYEQNGPASD 235
+V D M E++ V WN++I+ Y Q+G ++
Sbjct: 220 KVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAE 279
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV------ 289
A E+F RM++ I PDE T S++SACA+ F G +H + +R L+ D V
Sbjct: 280 AFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIR---LQPDFVPEAALP 336
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NALV +Y+K GK+ A +FD M +++VVS +++SGY ++ + +A +F +M ++
Sbjct: 337 VNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKS 396
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
+SW +++GY G E+AL LF ++ E V P YT+ + AC L L+ G+Q H
Sbjct: 397 ELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHA 456
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
H+V+ G E+ GN+L+ MY +CG+V+D +F M D VSWNAMI Q
Sbjct: 457 HLVQCGF------EASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G+G EAL LF +M+ G PD ++ + +L AC+HAGLV++G +YF SM ++ G++P +D
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGED 570
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY ++DLLGRAG + EA+ LI+ MP +P IW ++L+ C+++ ++ LG Y A +L ++
Sbjct: 571 HYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKM 630
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
P + G Y+LLSN Y+ GRW + RVRKLMR RGV K+PGCSWIE+ V+VF+V D +
Sbjct: 631 VPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTK 690
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPN 675
HP E+Y L+M+ +M+++GYVP+
Sbjct: 691 HPDAHEVYRFLEMVGAKMRKLGYVPD 716
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 165/303 (54%), Gaps = 4/303 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASE--IFIQNRLIDVYAKCGCLYGA 73
D F LL +C + + VH + I+ Q F E + + N L+ +Y+K G + A
Sbjct: 295 DEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVA 354
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
K+FD M+ K+V +WN+I++G ++ G +D+A+R+F MP + + SW MVSG+
Sbjct: 355 TKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAE 414
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+AL F +M SE+ +Y++ A++AC K G Q+HA L + + + G+AL+
Sbjct: 415 DALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALL 474
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +CG V AR VF M + VSWN++I+ Q+G +ALE+F +M+A GI PD +
Sbjct: 475 TMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRI 534
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+ ++++AC +G Q + R + L+D+ + G++ EAR +
Sbjct: 535 SFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKT 594
Query: 314 MPI 316
MP
Sbjct: 595 MPF 597
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/671 (34%), Positives = 371/671 (55%), Gaps = 70/671 (10%)
Query: 19 SSP-FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S P +A SC ++ R++HA IK++F+S+ + ++DVYAK L
Sbjct: 291 SQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSL------- 343
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA R F +P + N+M+ G + EA+G
Sbjct: 344 ------------------------TDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 379
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + S SACA + + G QVH L KS + D+ + +A++D+YG
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYG 439
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A +F GM++++ VSWN++I EQNG D + F M+ G++PD+ T S
Sbjct: 440 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGS 499
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA+L + + GL +H ++++ L +D + + +VDMY KCG ++EA+ + DR
Sbjct: 500 VLKACAALRSLEYGLMVHDKVIK-SGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR---- 554
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ G + VVSWNA+++G++ N E+EEA F +
Sbjct: 555 --------IGG-------------------QQVVSWNAILSGFSLNKESEEAQKFFSEML 587
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P H+TF +L+ CANLA ++LG+Q H ++K + D ++ ++L+DMY
Sbjct: 588 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEML------DDEYISSTLVDMYA 641
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + D +FE + +RD+VSWNAMI G A +G G EAL +F++M P+H T +
Sbjct: 642 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 701
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GL ++G +YF M+ + L P +H+ CMVD+LGR+ EA I +MP Q
Sbjct: 702 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 761
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DAVIW +LL+ CK+ +++ + E A +L ++P +S Y+LLSN+YAE G+W +V R R
Sbjct: 762 ADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTR 821
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+L+++ + K+PGCSWIE+ ++ F+V DK HP + E+Y +L L EMK GY P+++
Sbjct: 822 RLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSA 881
Query: 678 DDEAYEEQNGS 688
+E+ +
Sbjct: 882 SFVEVDEEGSA 892
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 208/692 (30%), Positives = 326/692 (47%), Gaps = 94/692 (13%)
Query: 22 FAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
F+++ SC ++ ++++ R HAR++ S F F+ N L+ +YA+C AR+VFD
Sbjct: 60 FSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDA 119
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M ++ +WN+++T G I A LF MP+ D SWN++VSG+ Q F E++ F
Sbjct: 120 MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 179
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V+M + +F L +C+ + +G QVHAL K+ DV GSAL+DMYGKC
Sbjct: 180 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKC 239
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ A F GM ERN VSW + I QN LE+F+ M G+ + + AS
Sbjct: 240 RSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAF 299
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+CA+++ G Q+HA ++ K +D V+G A+VD+YAK L +AR F +P N
Sbjct: 300 RSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP--NH 356
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
ETS NA++ G + G EA+GLF+ + R
Sbjct: 357 TVETS-----------------------------NAMMVGLVRAGLGIEAMGLFQFMIRS 387
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
S+ + + +ACA G+Q H +K SG + DI V N+++D+Y KC
Sbjct: 388 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK------SGFDVDICVNNAVLDLYGKC 441
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ + IF+ M ++D VSWNA+I QNG+ + + F +ML G KPD T VL
Sbjct: 442 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 501
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA------ 553
AC+ +E G + K GL + +VD+ + G +DEA+ L +
Sbjct: 502 KACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 560
Query: 554 ----------------------------MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
M ++PD + ++L C I LG+ + +
Sbjct: 561 VSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 620
Query: 586 LLEIEPSNSGPYV--LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
+++ E + Y+ L +MYA+ G + + V + + KR V SW N
Sbjct: 621 IIKQEMLDD-EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV-----SW-------NAM 667
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ H L E L+M R M++ VPN
Sbjct: 668 ICGYALHGLGVE---ALRMFER-MQKENVVPN 695
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 269/558 (48%), Gaps = 75/558 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA LL SC + +S +VHA +K+ ++ + L+D+Y KC L A F
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +N W SW + ++G Q++++ L
Sbjct: 250 YGMPERN---W----------------------------VSWGAAIAGCVQNEQYVRGLE 278
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M +S+ S+ SA +CA G Q+HA K+++SSD +G+A++D+Y
Sbjct: 279 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 338
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K ++ ARR F G+ + + N+++ + G +A+ +F M+ S I D V+L+
Sbjct: 339 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 398
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V SACA + +G Q+H ++ D+ + NA++D+Y KC L E
Sbjct: 399 VFSACAETKGYFQGQQVHCLAIK-SGFDVDICVNNAVLDLYGKCKALME----------- 446
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A L+F M +++ VSWNA+IA QNG ++ + F +
Sbjct: 447 --------------------AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEML 486
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P +T+G++L ACA L L+ G H V+K GL SD FV ++++DMY
Sbjct: 487 RFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGL------GSDAFVASTVVDMYC 540
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +++ ++ + + + VSWNA++ G + N EA F +ML G KPDH T
Sbjct: 541 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 600
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + K+ L D Y + +VD+ + G + ++ + E +
Sbjct: 601 VLDTCANLATIELGKQIHGQIIKQE---MLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 657
Query: 556 MQPDAVIWGSLLAACKVH 573
+ D V W +++ +H
Sbjct: 658 KR-DFVSWNAMICGYALH 674
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C +S+ VH ++IKS S+ F+ + ++D+Y KCG + A+K+
Sbjct: 493 DDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLH 552
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ + V +WN+I+ SGF+ + EA
Sbjct: 553 DRIGGQQVVSWNAIL-------------------------------SGFSLNKESEEAQK 581
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M ++F + L CA ++G Q+H + K D Y+ S L+DMY
Sbjct: 582 FFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYA 641
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + VF+ + +R+ VSWN++I Y +G +AL +F RM + P+ T +
Sbjct: 642 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 701
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ + F +G + + KL L +VD+ + EA + MP +
Sbjct: 702 VLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ 761
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA +LD+C ++ +++H +IIK + + +I + L+D+YAKCG + + VF
Sbjct: 594 DHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF 653
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K+ ++ +WN++I G+A H EAL
Sbjct: 654 EKVEKRDFVSWNAMIC-------------------------------GYALHGLGVEALR 682
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMY 196
F +M EN + +F + L AC+ F G + H + + + + + ++D+
Sbjct: 683 MFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDIL 742
Query: 197 GKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
G+ A + + M + + V W +L++
Sbjct: 743 GRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/649 (37%), Positives = 371/649 (57%), Gaps = 62/649 (9%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQ--NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSI 91
S++D R I + F + + N +I +K G + AR++FD+M +V TW ++
Sbjct: 30 SINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTV 89
Query: 92 ITGLLKWGFIDDASRLFASM-PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
I+G +K G I++A RLF + +++ +W +MV G+ + ++ S+A F +M ++N
Sbjct: 90 ISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKN---- 145
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
V + +ID Y + GR+ A +F+
Sbjct: 146 -----------------------------------VVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF-K 269
M ERN+VSWN++++ Q G +A +F RM P+ V+S A +A K
Sbjct: 171 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM------PER----DVISWTAMIAGLSK 220
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G ARL+ ++V NA++ YA+ +L+EA +F+RMP R++ S +M++G
Sbjct: 221 NGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGL 280
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTF 388
+ ++ AR +F +M ++NV+SW +I G Q GE+EEAL +F R+L P TF
Sbjct: 281 IQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 340
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L AC+NLA L G+Q H + K + + FV ++LI+MY KCG + ++
Sbjct: 341 VSVLGACSNLAGLGEGQQVHQIISK------TVYQDSTFVVSALINMYSKCGELGTARKM 394
Query: 449 FETMV--ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
F+ + +RD VSWN +I A +GYG EA+ FK+M G KPD VT +G+L ACSHAG
Sbjct: 395 FDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAG 454
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVEEG KYF + K+ + +DHY C+VDL GRAG L EA IE + +P A +WG+L
Sbjct: 455 LVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGAL 514
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LA C VH N+ +G+ AKKLLE+EP N+G Y+LLSN+YA G+W E RVR M+ +G+
Sbjct: 515 LAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLK 574
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
KQPGCSWIE+ V+VF+V DK H +K IY +L+ L +MK+ GY PN
Sbjct: 575 KQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 623
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 225/446 (50%), Gaps = 61/446 (13%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
+RS +SD ++ + S N +ID YA+ G + A +F+KM +NV +WN
Sbjct: 126 IRSNKISDAEKLFNEMPNKNVVS----WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWN 181
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
++++ L + G I++A RLF MPERD SW +M++G +++ R EA F +M N
Sbjct: 182 TVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVV- 240
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S+ + ++ A ++ + + + S M + LI + G + AR++F
Sbjct: 241 ---SWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLI----QNGDLRRARKLF 293
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAF 268
+ M ++N++SW ++IT Q G + +AL++F RM+++ G +P++ T SV+ AC++LA
Sbjct: 294 NEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGL 353
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
EG Q+H + + + V+ +AL++MY+KCG+L AR +FD M S
Sbjct: 354 GEGQQVHQIISKTVYQDSTFVV-SALINMYSKCGELGTARKMFD----------DGMTS- 401
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+R++VSWN +IA Y +G +EA+ F+ +++ P T+
Sbjct: 402 ------------------QRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTY 443
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSG--EESDIFVGNS----LIDMYMKCGSV 442
LL+AC +H +V+ GL++ ++ I V L+D+ + G +
Sbjct: 444 VGLLSAC-----------SHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRL 492
Query: 443 EDGCRIFETMVERDWVS-WNAMIVGC 467
++ E + + W A++ GC
Sbjct: 493 KEAFGFIERLETKPSARVWGALLAGC 518
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/653 (35%), Positives = 364/653 (55%), Gaps = 75/653 (11%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C + V+ +H +K+ + +F+ + L+D+Y K G ++ R+VF +M +NV +
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVS 184
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
W +IITGL++ G+ EAL YF +M
Sbjct: 185 WTAIITGLVRAGY-------------------------------NKEALVYFSEMWRSRV 213
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
Y+F AL ACA S G ++HA K + ++ + L MY KCG++
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F+ M R++VSW ++IT Q G A++ F+RM S + P+E T A+V+S CA+LA
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+ G Q+HA ++ L L + N+++ MYAKCG+L + +F M R++VS ++++
Sbjct: 334 IEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTII- 391
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
AGY+Q G EA L ++ E PT +
Sbjct: 392 ------------------------------AGYSQGGHVSEAFELLSWMRMEGPKPTEFA 421
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
++L+AC N+A L+ G+Q H +V+ GL E V ++LI+MY KCGS+E+ R
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGL------EHTAMVLSALINMYCKCGSIEEASR 475
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF+ D VSW AMI G A++GY E + LF+K+ G +PD VT IGVL ACSHAGL
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+ G +YF++MSK++ ++P K+HY CM+DLL RAG L +A+ +IEAMP D V+W +LL
Sbjct: 536 VDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC+VH ++ G A+++L++EP+ +G ++ L+N+YA G+W E +RKLM+ +GV+K
Sbjct: 596 RACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIK 655
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE------MKRVGYVP 674
+PG SWI++ V F+ D+ HP ++IY +L +L ++ G++P
Sbjct: 656 EPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 708
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 236/489 (48%), Gaps = 47/489 (9%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-F 147
N + L+K G + +A R+F M ++D+ SW +++SG+ + SEAL F M E+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ + A AC + D G +H K+ + V++GSAL+DMY K G++ RR
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF M RN+VSW ++IT + G +AL F M S +E D T A + ACA A
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G +IHA+ M+ + + N L MY KCGKL +F++M +R+VVS
Sbjct: 233 LNYGREIHAQAMK-KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS------ 285
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
W +I Q G+ E A+ F ++ V P YT
Sbjct: 286 -------------------------WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +++ CANLA ++ G Q H ++ GL + + V NS++ MY KCG +
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGL------AASLSVENSIMTMYAKCGQLTSSSV 374
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF M RD VSW+ +I G +Q G+ +EA L M + G KP + VL AC + +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 508 VEEGRK---YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+E G++ Y S+ EH L + ++++ + G ++EA + +A D V W
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVL----SALINMYCKCGSIEEASRIFDAAE-NDDIVSWT 489
Query: 565 SLLAACKVH 573
+++ H
Sbjct: 490 AMINGYAEH 498
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 221/461 (47%), Gaps = 81/461 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA L +C S +++ R +HA+ +K F F+ N L +Y KCG L +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KMS ++V +W +IIT L++ G +++C A+
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMG--------------QEEC-----------------AVQ 304
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + + +EY+F + +S CA + G Q+HAL+ ++ + + ++++ MY
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+++ + +F M R+IVSW+++I Y Q G S+A E+ M G +P E LAS
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALAS 424
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC ++A + G Q+HA ++ +VL +AL++MY KCG + EA +FD
Sbjct: 425 VLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL-SALINMYCKCGSIEEASRIFDAAEND 483
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS T+M++GYA ++G + E + LF +
Sbjct: 484 DIVSWTAMINGYA-------------------------------EHGYSREVIDLFEKIP 512
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------ 431
R + P TF +L+AC +H +V G R+ + + S
Sbjct: 513 RVGLRPDSVTFIGVLSAC-----------SHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ID+ + G + D + E M RD V W+ ++ C +G
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 137/355 (38%), Gaps = 79/355 (22%)
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ DL N + K G L AR +FD+M ++ +S T+++SGY A+ A L+F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 345 M----------------------------------------LERNVVSWNALIAGYTQNG 364
M L +V +AL+ YT+NG
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 365 E-------------------------------NEEALGLFRLLKRESVCPTHYTFGNLLN 393
+ N+EAL F + R V YTF L
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+ L GR+ H +K G S FV N+L MY KCG +E G +FE M
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSS------FVANTLATMYNKCGKLEYGLTLFEKMS 279
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
RD VSW +I Q G A+ F +M P+ T V+ C++ +E G +
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++ GLA ++ + + G L + + M + D V W +++A
Sbjct: 340 -LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIA 392
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
DLQ+ +++ ++ ++ + F+S ++D+ N + +K G + + R+F+ M ++D +S
Sbjct: 26 DLQVLERSNDNLSQN-IHFIS--QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEIS 82
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
W +I G +EAL LFK M + G + D + AC V G +
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYG-ELLHGY 141
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ + GL + ++D+ + G + E + + MPM+ + V W +++
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAII 189
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 383/662 (57%), Gaps = 47/662 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG---ARKVFDKMS 81
LL+SC KS ++HA+ I + +IF +RLI ++ G G +R +F ++
Sbjct: 15 LLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+F WN +M+ G+++ D EA+ ++
Sbjct: 72 CPNLFMWN-------------------------------TMIRGYSRSDNPREAIVLYMS 100
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M ++ A + ++F L++CA + G +VH+ + K + SD+++ +ALI +Y G
Sbjct: 101 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFG 160
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR +FD R++VS+N++I Y + AL +F M SGI PDE T ++ S
Sbjct: 161 NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFS 220
Query: 261 ACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI-RN 318
C+ L G QIHA++ + + ++++L +A+VDMYAKCG +N A VF M ++
Sbjct: 221 VCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKS 280
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+ +SMV GYA+ + AR +F M ER+V+SW A+I+GY+Q G+ EAL LF+ ++
Sbjct: 281 AAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEA 340
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T +L+ACA L LG++ + +++G+ + + +++DMY K
Sbjct: 341 LGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVF-----NQNTILTAAVMDMYAK 395
Query: 439 CGSVEDGCRIFETMVE--RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
CGS++ IF + + + +N+MI G AQ+G G A+ +F++++ G KPD VT +
Sbjct: 396 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 455
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVLCAC H+GL+EEG+K F SM +G+ P +HY CMVDLLGR GCL+EA L++ MP
Sbjct: 456 GVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPF 515
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ ++VIW +LL+AC+ H N+ +GE +KLLE+E + YVLLSN+ A+ +W E +V
Sbjct: 516 EANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 575
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RK+M G+ K PG S+IE+ G ++ F+ DK HP KEI L+LK + +K GYVPN
Sbjct: 576 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 635
Query: 677 SD 678
+
Sbjct: 636 AQ 637
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 236/497 (47%), Gaps = 100/497 (20%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
I +A ++ F LL+SC R S+ VH+ IIK F S++F++N LI +Y+ G
Sbjct: 102 IAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGN 161
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L AR +FD+ S++ L+ S+N+M+ G+A+
Sbjct: 162 LNLARTLFDE----------SLVRDLV---------------------SYNTMIKGYAEV 190
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS--SDVY 187
++ AL F +M + E++F + S C+ + +G Q+HA + K+ S S++
Sbjct: 191 NQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNIL 250
Query: 188 MGSALIDMYGK--------------------------------CGRVSCARRVFDGMRER 215
+ SA++DMY K CG ++ AR++F+ M ER
Sbjct: 251 LKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHER 310
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+++SW ++I+ Y Q G S+ALE+F M A GI+PDEVTL +V+SACA L AF G +++
Sbjct: 311 DVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLY 370
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ + + +L A++DMYAKCG ++ A +F R+ +M +G+
Sbjct: 371 HQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVG-------KNMKTGFV----- 418
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+N++IAG Q+G E A+ +FR L + P TF +L AC
Sbjct: 419 -----------------FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCAC 461
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
+ ++ G++ + G + + ++D+ + G +E+ + + M E
Sbjct: 462 GHSGLIEEGKKLFESMFN-----AYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE 516
Query: 455 RDWVSWNAMIVGCAQNG 471
+ V W A++ C +G
Sbjct: 517 ANSVIWRALLSACRTHG 533
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 174/337 (51%), Gaps = 7/337 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKS--QFASEIFIQNRLIDVYAKCGCLYGARK 75
D F L C + +++HA++ K+ S I +++ ++D+YAKCG + A +
Sbjct: 211 DEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAER 270
Query: 76 VFDKM-SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
VF M ++K+ W+S++ G + G I+ A +LF M ERD SW +M+SG++Q + SE
Sbjct: 271 VFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSE 330
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALI 193
AL F +M + E + + LSACA F +G ++ H + ++ + + +A++
Sbjct: 331 ALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVM 390
Query: 194 DMYGKCGRVSCARRVFD--GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
DMY KCG + A +F G + +NS+I Q+G A+ VF ++++G++PD
Sbjct: 391 DMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPD 450
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
EVT V+ AC +EG ++ + ++ + +VD+ + G L EA +
Sbjct: 451 EVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLV 510
Query: 312 DRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+MP N V +++S +VK + K+LE
Sbjct: 511 QKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLE 547
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 247/670 (36%), Positives = 361/670 (53%), Gaps = 71/670 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C + + R++H+ IIK F +F++N L+D+YAKCG
Sbjct: 449 DEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA-------- 500
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++A + F + RD SWN+++ G+ Q + EA
Sbjct: 501 -----------------------LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + A E S S LS CA + G QVH L KS + +Y GS+LIDMY
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYV 597
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VF M R++VS N++I Y QN +A+++F M G+ P E+T AS
Sbjct: 598 KCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFAS 656
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC G QIH + + L + LG +L+ MY + +A +F
Sbjct: 657 LLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQ-- 714
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
Y K++ + W A+I+G+TQNG +EEAL L++ +
Sbjct: 715 -----------YPKST-----------------ILWTAIISGHTQNGCSEEALQLYQEMH 746
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P TF ++L AC+ LA L GR H+ L F G +SD G++++DMY
Sbjct: 747 RNNARPDQATFASVLRACSILASLGDGRMIHS------LIFHVGLDSDELTGSAVVDMYA 800
Query: 438 KCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG ++ ++FE M + D +SWN+MIVG A+NGY AL +F +M +PD VT +
Sbjct: 801 KCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFL 860
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL ACSHAG V EGR+ F M + + P DH CM+DLLGR G L EA+ I+ +
Sbjct: 861 GVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNF 920
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P+A+IW +LL AC++H + + G A+KL+E+EP NS PYVLLSN+YA G W EV V
Sbjct: 921 EPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSV 980
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R+ MR++G+ K PGCSWI + N+F+ DK HP EI+ +LK L MK GY+ A
Sbjct: 981 RRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYI--A 1038
Query: 677 SDDEAYEEQN 686
D E+++
Sbjct: 1039 ETDSLLEDED 1048
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 208/703 (29%), Positives = 327/703 (46%), Gaps = 121/703 (17%)
Query: 4 QRSVKQIV---GDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFI 56
Q S++Q++ G L SP +A +L SC R + ++VH +IK F F
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFC 219
Query: 57 QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF---------------- 100
+ LID+Y+KCG L ARK+FD + + + +W ++I G ++ G
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279
Query: 101 -------------------IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+DDA LF MP + +WN M+SG + EA+ +F
Sbjct: 280 VPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKN 339
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + GS LSA A G VHA K +S+VY+GS+LI+MY KC +
Sbjct: 340 MWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEK 399
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A++VFD + ERN+V WN+++ Y QNG AS +++F M G PDE T S++SA
Sbjct: 400 MEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSA 459
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L + G Q+H+ +++ +L + N LVDMYAKCG L EAR F+ + R+ VS
Sbjct: 460 CACLECLEMGRQLHSFIIK-HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVS 518
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++ G Y Q + +EA +FR + + +
Sbjct: 519 WNAIIVG-------------------------------YVQEEDEDEAFNMFRRMILDGI 547
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P + ++L+ CANL L+ G Q H +VK GL ++ ++ G+SLIDMY+KCG+
Sbjct: 548 APDEVSLASILSGCANLQALEQGEQVHCFLVKSGL------QTCLYAGSSLIDMYVKCGA 601
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E +F M R VS NA+I G AQN EA+ LF++M G P +T +L A
Sbjct: 602 IEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDA 660
Query: 502 CSHAGLVEEGRK------------------------YFSSMSKEHGLAPLKDH------- 530
C+ + GR+ Y +S K +
Sbjct: 661 CTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTI 720
Query: 531 -YTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+T ++ + GC +EA L + M +PD + S+L AC + ++ G + +
Sbjct: 721 LWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI 780
Query: 587 LEIEPSN---SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ + +G V+ +MYA+ G V+V + M + V
Sbjct: 781 FHVGLDSDELTGSAVV--DMYAKCGDMKSSVQVFEEMGSKNDV 821
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 313/641 (48%), Gaps = 109/641 (17%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
++ +HA+ +K F S+ + + ++D+YAKCG + A K F+++ +++ WNS+++ +
Sbjct: 100 SKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSR 159
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
G ++ F S+ N VS +++++
Sbjct: 160 QGSLEQVIWCFGSLQ-------NCGVSP------------------------NQFTYAIV 188
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
LS+CA VD +G QVH + K + + + +LIDMY KCG + AR++FD + + +
Sbjct: 189 LSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDT 248
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSW ++I Y Q G +AL+VF M G+ PD+V +V++AC L + + +
Sbjct: 249 VSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQ 308
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM----------------------- 314
+ ++V N ++ + K G EA F M
Sbjct: 309 MP-----NTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLE 363
Query: 315 -----------PIR-----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
I+ NV +S+++ YAK +++A+ +F + ERN+V WNA++
Sbjct: 364 ALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY QNG + + LF ++ P +T+ ++L+ACA L L++GRQ H+ ++KH
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNF-- 481
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
E ++FV N+L+DMY KCG++E+ + FE + RD VSWNA+IVG Q EA
Sbjct: 482 ----EYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFN 537
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F++M+L G PD V++ +L C++ +E+G + + K GL + ++D+
Sbjct: 538 MFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMY 596
Query: 539 GRAGCLDEAKTLIEAMPMQP----DAVIWG----SLLAACKVHRNIM-----LGEYVAKK 585
+ G ++ A+ + MP + +A+I G L+ A + + + E
Sbjct: 597 VKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFAS 656
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LL+ + +GPY L LGR ++ L++KRG++
Sbjct: 657 LLD---ACTGPYKL------NLGR-----QIHCLIQKRGLL 683
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+L + + T H G S +G++++D+Y KCG+VE + F + +RD ++WN
Sbjct: 92 RLAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWN 151
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
+++ ++ G + + F + CG P+ T VL +C+ ++ G++ + K
Sbjct: 152 SVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK- 210
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G ++D+ + G L +A+ + +A+ + PD V W +++A
Sbjct: 211 MGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAG 257
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 362/669 (54%), Gaps = 76/669 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C + S+ + + +HA ++S + F+ L+D+Y+KCG +Y A KVF K+
Sbjct: 54 LSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR 113
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N D +W++M++G Q EA F
Sbjct: 114 NP-------------------------------DVVAWSAMITGLDQQGHGQEAAELFHL 142
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++++ S +S D + G +H + K + SD + + LI MY K
Sbjct: 143 MRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRC 202
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V +VF+ M ++VSWN+L++ + + +F +M+ G +P+ T SV+ +
Sbjct: 203 VEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRS 262
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+SL + G Q+HA +++ +D V G ALVDMYAK ARC+ D
Sbjct: 263 CSSLLDPEFGKQVHAHIIKNSSDDDDFV-GTALVDMYAK------ARCLED--------- 306
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
A + F +++ R++ SW +I+GY Q + E+A+ FR ++RE +
Sbjct: 307 ----------------AGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 350
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT + L+ C+++A L+ GRQ H VK +G DIFVG++L+D+Y KCG
Sbjct: 351 KPNEYTLASCLSGCSHMATLENGRQLHAVAVK------AGHFGDIFVGSALVDLYGKCGC 404
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E IF+ ++ RD VSWN +I G +Q+G G +AL F+ ML G PD T IGVL A
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS GLVEEG+K F SMSK +G+ P +HY CMVD+LGRAG +E K IE M + P ++
Sbjct: 465 CSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL 524
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW ++L ACK+H N+ GE AKKL E+EP Y+LLSN++A GRW +V +R LM
Sbjct: 525 IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMT 584
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP------- 674
RG+ K+PGCSW+E+ G V+VF+ +D HP +EIY L L + + +GYVP
Sbjct: 585 SRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLH 644
Query: 675 NASDDEAYE 683
N S+ E E
Sbjct: 645 NVSNKEKME 653
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 238/476 (50%), Gaps = 52/476 (10%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A RLF MPE++ SWN++++G+AQ + L F KM S+++ + L CA
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+ + G +HAL +S D ++G +L+DMY KCG V A +VF +R ++V+W+++
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
IT +Q G +A E+F M G P++ TL+S+VS ++ + G IH + +
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK-YG 182
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+D ++ N L+ MY K +RCV D +F
Sbjct: 183 FESDNLVSNPLIMMYMK------SRCVED-------------------------GNKVFE 211
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
M ++VSWNAL++G+ + +F + E P +TF ++L +C++L D +
Sbjct: 212 AMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+Q H H++K + + D FVG +L+DMY K +ED F+ +V RD SW +
Sbjct: 272 GKQVHAHIIK------NSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVI 325
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G AQ +A+ F++M G KP+ T+ L CSH +E GR+ H
Sbjct: 326 ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL-------HA 378
Query: 524 LAPLKDHY------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+A H+ + +VDL G+ GC++ A+ + + + + D V W ++++ H
Sbjct: 379 VAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQH 433
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 385/720 (53%), Gaps = 110/720 (15%)
Query: 33 KSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
K V D + +VHA + + F S++F+ N L+ +Y
Sbjct: 18 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGG----------------------- 54
Query: 90 SIITGLLKWGFIDDASRLF-ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+GF+DDA R+F + ER+ SWN ++S + ++D+ +A+ F +M
Sbjct: 55 --------FGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 106
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E+ F ++AC GS + G QVHA++ + Y DV+ +AL+DMY K GRV A +
Sbjct: 107 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 166
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M + ++VSWN+LI+ NG A+E+ ++M +SG+ P+ L+S++ ACA AF
Sbjct: 167 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 226
Query: 269 KEGLQIHARLMRCEKLRND------------------------------LVLGNALVDMY 298
G QIH +++ +D L+L NAL+
Sbjct: 227 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 286
Query: 299 AKCGKLNEARCVF----------DRMPIRNVVSETS------------------------ 324
+ G+ +EA +F +R + V+ T+
Sbjct: 287 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA 346
Query: 325 -----MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ Y K S + A +F + ++++ ++I +Q E A+ LF + R+
Sbjct: 347 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK 406
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNACA+L+ + G+Q H H++K +F+S D F GN+L+ Y KC
Sbjct: 407 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--QFMS----DAFAGNALVYTYAKC 460
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F ++ ER VSW+AMI G AQ+G+G AL LF +M+ G P+H+TM VL
Sbjct: 461 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAGLV+E ++YF+SM + G+ ++HY+CM+DLLGRAG LD+A L+ +MP Q +
Sbjct: 521 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL A +VH++ LG+ A+KL +EP SG +VLL+N YA G W EV +VRKL
Sbjct: 581 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 640
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ + K+P SW+E+ V+ F+V DK HP+ KEIY L L M + GY+PN D
Sbjct: 641 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 700
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 243/532 (45%), Gaps = 81/532 (15%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E +E++ L D ++G QVHA+ + + SDV++ +AL+ MYG G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 202 VSCARRVFD-GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ ARRVFD ERN VSWN L++ Y +N DA++VF M+ SGI+P E + VV+
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC G Q+HA ++R D+ NALVDMY K G+++ A +F++MP
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRM-GYEKDVFTANALVDMYVKMGRVDIASVIFEKMP----- 171
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ +VVSWNALI+G NG + A+ L +K
Sbjct: 172 --------------------------DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P + ++L ACA LGRQ H ++K + +SD ++G L+DMY K
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK------ANADSDDYIGVGLVDMYAKNH 259
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++D ++F+ M RD + WNA+I GC+ G EA +F + G + T+ VL
Sbjct: 260 FLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319
Query: 501 ACSHAGLVEEGRKYFSSMSK------EHGLAPLKDHY---TCMVDLLG-----RAGCLDE 546
+ + R+ + K H + L D Y +C+ D + +G +
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 379
Query: 547 AKTLIEAMP-------------------MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
++I A+ ++PD + SLL AC G+ V L+
Sbjct: 380 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439
Query: 588 EIE-PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
+ + S++ L YA+ G + + +RGVV SW ++G
Sbjct: 440 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV-----SWSAMIG 486
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ PF + LL++C + ++VHA +IK QF S+ F N L+ YAKCG + A
Sbjct: 408 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 467
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F + + V +W+++I GL AQH
Sbjct: 468 LAFSSLPERGVVSWSAMIGGL-------------------------------AQHGHGKR 496
Query: 135 ALGYFVKMHSENFALSEYSFGSALSAC--AGSVD--FKMGTQVHALLSKSRYSSDVYMGS 190
AL F +M E + + S L AC AG VD + + + R + + Y S
Sbjct: 497 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR-TEEHY--S 553
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ID+ G+ G++ A + + M + N W +L+
Sbjct: 554 CMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/659 (36%), Positives = 365/659 (55%), Gaps = 69/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C ++ ++H+ IK+ +++I ++ L+D+Y+KC + A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+N+ W N M+ + Q D S++
Sbjct: 421 LXTETENIVLW-------------------------------NVMLVAYGQLDNLSDSFE 449
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E +++++ S L C +G Q+H + K+ + +VY+ S LIDMY
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G+++ A R+ + E ++VSW ++I Y Q+ S+AL++F M GI+ D + AS
Sbjct: 510 KYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFAS 569
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + A ++G QIHA+ DL + NAL+ +YA+CG++ E
Sbjct: 570 AISACAGIRALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQE----------- 617
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A L F K+ ++N +SWN+L++G Q+G EEAL +F +
Sbjct: 618 --------------------AYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R +T+G+ ++A A+LA+++ G+Q H+ V+K +G +S+ V NSLI +Y
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK------TGYDSEREVSNSLISLYA 711
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K GS+ D R F M ER+ +SWNAMI G +Q+G G EAL LF++M +CG P+HVT +G
Sbjct: 712 KSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVG 771
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV+EG YF SM K H L P +HY C+VDLLGRAG LD A I+ MP+
Sbjct: 772 VLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIP 831
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DA+IW +LL+AC +H+NI +GE A LLE+EP +S YVL+SN+YA +W R
Sbjct: 832 ADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSR 891
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
KLM+ GV K+PG SWIE+ V+ F DK HPL +IY + L R +GYV ++
Sbjct: 892 KLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 265/549 (48%), Gaps = 72/549 (13%)
Query: 22 FAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
FA +L +C+ + + ++VH+R F S + N LID+Y+K G
Sbjct: 162 FAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG------------ 209
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+I+ A ++F + +D +W +M+SG +Q+ EA+ F
Sbjct: 210 -------------------YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFC 250
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
MH+ + Y S LSA F++G Q+H L+ K + S+ Y+ + L+ +Y +
Sbjct: 251 DMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSR 310
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A R+F M R+ VS+NSLI+ Q G + ALE+F +M ++PD +T+AS++S
Sbjct: 311 KLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLS 370
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACAS+ A +G+Q+H+ ++ + D++L +L+D+Y+KC
Sbjct: 371 ACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLDLYSKC------------------- 410
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ V++A F N+V WN ++ Y Q ++ +FR ++ E
Sbjct: 411 ------------ADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T+ ++L C +L L LG Q HTHV+K G + +++V + LIDMY K G
Sbjct: 459 MIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL------NVYVCSVLIDMYAKYG 512
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ RI + E D VSW AMI G Q+ +EAL LF++M G + D++ +
Sbjct: 513 QLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAIS 572
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+ + +G++ + S G ++ L R G + EA E + +
Sbjct: 573 ACAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNN 630
Query: 561 VIWGSLLAA 569
+ W SL++
Sbjct: 631 ISWNSLVSG 639
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 258/552 (46%), Gaps = 76/552 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL+ CL S S+ +T R+H RI KS F E + + L+D Y + G +GA KVFD+ SN++
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
VF SWN M+ F + F +M +
Sbjct: 124 VF-------------------------------SWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 145 ENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E + Y+F L AC G + F QVH+ + S + + LID+Y K G +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A++VF+ + ++IV+W ++I+ QNG +A+ +F M AS I P L+SV+SA
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ F+ G Q+H +++ ++ + N LV +Y++ KL A +F M R+ VS
Sbjct: 273 KIQLFELGEQLHCLVIKW-GFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYN 331
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++S G Q G ++ AL LF ++R+ + P
Sbjct: 332 SLIS-------------------------------GLVQQGFSDRALELFTKMQRDCLKP 360
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL+ACA++ L G Q H+H +K G+ +DI + SL+D+Y KC VE
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGM------SADIILEGSLLDLYSKCADVE 414
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ F + V WN M+V Q +++ +F++M + G P+ T +L C+
Sbjct: 415 TAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
G + G + + + K G + Y C ++D+ + G L A ++ +P + D V
Sbjct: 475 SLGALYLGEQIHTHVIKT-GFQL--NVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVV 530
Query: 562 IWGSLLAACKVH 573
W +++A H
Sbjct: 531 SWTAMIAGYVQH 542
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 222/505 (43%), Gaps = 75/505 (14%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L C S ++H +SKS + + + +L+D Y + G A +VFD R++
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSV 124
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHA 276
SWN +I + +F RM+A GI P+ T A V+ AC AF Q+H+
Sbjct: 125 FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHS 184
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R + LV N L+D+Y+K G + A+ VF+ + ++++V+ +M+S
Sbjct: 185 RTFYYGFDSSPLV-ANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMIS--------- 234
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
G +QNG EEA+ LF + + PT Y ++L+A
Sbjct: 235 ----------------------GLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ +LG Q H V+K G S+ +V N L+ +Y + + RIF TM RD
Sbjct: 273 KIQLFELGEQLHCLVIKWGFH------SETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VS+N++I G Q G+ AL LF KM KPD +T+ +L AC+ G + +G + S
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 517 -----SMSKEHGL-APLKDHYTCMVDL------------------------LGRAGCLDE 546
MS + L L D Y+ D+ G+ L +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSD 446
Query: 547 AKTLIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV--LLS 601
+ + M M+ P+ + S+L C + LGE + +++ YV +L
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLI 505
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVV 626
+MYA+ G+ +R+ + + + VV
Sbjct: 506 DMYAKYGQLALALRILRRLPEDDVV 530
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 365/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ A L+ +C ++ +++HA K FAS I+ L+++YAKC + A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +NV WN + L+ +G +DD F
Sbjct: 448 LETEVENVVLWNVM---LVAYGLLDDLRNSFR---------------------------- 476
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E ++Y++ S L C D ++G Q+H+ + K+ + + Y+ S LIDMY
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A + +++VSW ++I Y Q AL F +M+ GI DEV L +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VSACA L A KEG QIHA+ +DL NALV +Y++CGK+ E+
Sbjct: 597 AVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIEESY--------- 646
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
L F + + ++WNAL++G+ Q+G NEEAL +F +
Sbjct: 647 ----------------------LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE + ++TFG+ + A + A+++ G+Q H + K +G +S+ V N+LI MY
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK------TGYDSETEVCNALISMYA 738
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ D + F + ++ VSWNA+I +++G+G+EAL F +M+ +P+HVT++G
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV++G YF SM+ E+GL+P +HY C+VD+L RAG L AK I+ MP++
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA++W +LL+AC VH+N+ +GE+ A LLE+EP +S YVLLSN+YA +W R
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ M+++GV K+PG SWIE+ ++ F V D+ HPL EI+ + LT+ +GYV +
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 250/550 (45%), Gaps = 79/550 (14%)
Query: 25 LLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL+ CL++ S+ + R++H++I+K S + +L D Y G LYGA KVFD+M
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM--- 146
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
PER +WN M+ A + E G FV+M
Sbjct: 147 ----------------------------PERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 144 SENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
SEN +E +F L AC GSV F + Q+HA + + + LID+Y + G V
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
ARRVFDG+R ++ SW ++I+ +N ++A+ +F M GI P +SV+SAC
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ + + G Q+H +++ +D + NALV +Y G L A +F M R+ V
Sbjct: 299 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-- 355
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++N LI G +Q G E+A+ LF+ + + +
Sbjct: 356 -----------------------------TYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P T +L+ AC+ L G+Q H + K G S+ + +L+++Y KC +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF------ASNNKIEGALLNLYAKCADI 440
Query: 443 EDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
E F ET VE + V WN M+V + +F++M + P+ T +L
Sbjct: 441 ETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPD 559
C G +E G + S + K + + Y C ++D+ + G LD A ++ + D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 555
Query: 560 AVIWGSLLAA 569
V W +++A
Sbjct: 556 VVSWTTMIAG 565
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 83/494 (16%)
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
GS+D G ++H+ + K S+ + L D Y G + A +VFD M ER I +WN
Sbjct: 99 GSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHARLMRC 281
+I + +FVRM++ + P+E T + V+ AC AF QIHAR++
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY- 215
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ LR+ V+ N L+D+Y++ G ++ AR VFD + +++ S
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-------------------- 255
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
W A+I+G ++N EA+ LF + + PT Y F ++L+AC + L
Sbjct: 256 -----------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
++G Q H V+K G SD +V N+L+ +Y G++ IF M +RD V++N
Sbjct: 305 EIGEQLHGLVLKLGF------SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY------- 514
+I G +Q GYG +A+ LFK+M L G +PD T+ ++ ACS G + G++
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 515 -FSSMSKEHGLAPLKDHYTCMVD---------------------LLGRAGCLDEAKT--- 549
F+S +K G L + Y D +L G LD+ +
Sbjct: 419 GFASNNKIEG--ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 550 LIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYA 605
+ M ++ P+ + S+L C ++ LGE + ++++ N+ +L +MYA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 606 ELGR----WGEVVR 615
+LG+ W ++R
Sbjct: 537 KLGKLDTAWDILIR 550
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 385/720 (53%), Gaps = 110/720 (15%)
Query: 33 KSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
K V D + +VHA + + F S++F+ N L+ +Y
Sbjct: 111 KCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGG----------------------- 147
Query: 90 SIITGLLKWGFIDDASRLF-ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+GF+DDA R+F + ER+ SWN ++S + ++D+ +A+ F +M
Sbjct: 148 --------FGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E+ F ++AC GS + G QVHA++ + Y DV+ +AL+DMY K GRV A +
Sbjct: 200 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 259
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M + ++VSWN+LI+ NG A+E+ ++M +SG+ P+ L+S++ ACA AF
Sbjct: 260 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAF 319
Query: 269 KEGLQIHARLMRCEKLRND------------------------------LVLGNALVDMY 298
G QIH +++ +D L+L NAL+
Sbjct: 320 DLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGC 379
Query: 299 AKCGKLNEARCVF----------DRMPIRNVVSETS------------------------ 324
+ G+ +EA +F +R + V+ T+
Sbjct: 380 SHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDA 439
Query: 325 -----MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ Y K S + A +F + ++++ ++I +Q E A+ LF + R+
Sbjct: 440 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNACA+L+ + G+Q H H++K +F+S D F GN+L+ Y KC
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--QFMS----DAFAGNALVYTYAKC 553
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F ++ ER VSW+AMI G AQ+G+G AL LF +M+ G P+H+TM VL
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAGLV+E ++YF+SM + G+ ++HY+CM+DLLGRAG LD+A L+ +MP Q +
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL A +VH++ LG+ A+KL +EP SG +VLL+N YA G W EV +VRKL
Sbjct: 674 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 733
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ + K+P SW+E+ V+ F+V DK HP+ KEIY L L M + GY+PN D
Sbjct: 734 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 793
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 176/634 (27%), Positives = 284/634 (44%), Gaps = 114/634 (17%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+HA ++KS F + + +N LI Y+KC AR+VFD++
Sbjct: 25 HLHANLLKSGFLASL--RNHLISFYSKCRRPCCARRVFDEI------------------- 63
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
P+ SW+S+V+ ++ + A+ F M +E +E++ L
Sbjct: 64 ------------PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK 111
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD-GMRERNIV 218
D ++G QVHA+ + + SDV++ +AL+ MYG G + ARRVFD ERN V
Sbjct: 112 CVP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAV 168
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWN L++ Y +N DA++VF M+ SGI+P E + VV+AC G Q+HA +
Sbjct: 169 SWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 228
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R D+ NALVDMY K G+++ A +F++MP
Sbjct: 229 VRM-GYEKDVFTANALVDMYVKMGRVDIASVIFEKMP----------------------- 264
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+ +VVSWNALI+G NG + A+ L +K + P + ++L ACA
Sbjct: 265 --------DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
LGRQ H ++K + +SD ++G L+DMY K ++D ++F+ M RD +
Sbjct: 317 GAFDLGRQIHGFMIK------ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLI 370
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
WNA+I GC+ G EA +F + G + T+ VL + + R+ +
Sbjct: 371 LWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALA 430
Query: 519 SK------EHGLAPLKDHY---TCMVDLLG-----RAGCLDEAKTLIEAMP--------- 555
K H + L D Y +C+ D + +G + ++I A+
Sbjct: 431 EKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAI 490
Query: 556 ----------MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE-PSNSGPYVLLSNMY 604
++PD + SLL AC G+ V L++ + S++ L Y
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTY 550
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
A+ G + + +RGVV SW ++G
Sbjct: 551 AKCGSIEDAELAFSSLPERGVV-----SWSAMIG 579
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 202/403 (50%), Gaps = 48/403 (11%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G +HA L KS + + + + LI Y KC R CARRVFD + + VSW+SL+T Y
Sbjct: 23 GAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
NG A++ F M A G+ +E L VV C A G Q+HA M +D+
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDAQL--GAQVHAMAM-ATGFGSDVF 136
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NALV MY G +++AR VFD +A S ++A
Sbjct: 137 VANALVAMYGGFGFMDDARRVFD------------------EAGSERNA----------- 167
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VSWN L++ Y +N + +A+ +F + + PT + F ++NAC ++ GRQ H
Sbjct: 168 -VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA 226
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
VV+ G E D+F N+L+DMY+K G V+ IFE M + D VSWNA+I GC
Sbjct: 227 MVVRMGY------EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
NG+ A+ L +M G P+ + +L AC+ AG + GR+ M K + + D
Sbjct: 281 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADS---D 337
Query: 530 HY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
Y +VD+ + LD+A + + M + D ++W +L++ C
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGC 379
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ PF + LL++C + ++VHA +IK QF S+ F N L+ YAKCG + A
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F + + V +W+++I GL AQH
Sbjct: 561 LAFSSLPERGVVSWSAMIGGL-------------------------------AQHGHGKR 589
Query: 135 ALGYFVKMHSENFALSEYSFGSALSAC--AGSVD--FKMGTQVHALLSKSRYSSDVYMGS 190
AL F +M E + + S L AC AG VD + + + R + + Y S
Sbjct: 590 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR-TEEHY--S 646
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ID+ G+ G++ A + + M + N W +L+
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 681
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 368/624 (58%), Gaps = 16/624 (2%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTW----NSIITGLLKWGFIDDASRLFASMPERD 115
+ V C L R++ +++ + ++ N+++T ++G + DA R+F S+ RD
Sbjct: 113 FVSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRD 172
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+ SWN+++ +Q +S AL F +M + + ++ + +S + G ++HA
Sbjct: 173 ETSWNAVILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+ + + +D+ + +ALI+MYGKCG AR VFD M++R++VSWN +I CY NG +
Sbjct: 232 EIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHE 291
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
ALE++ ++ G + + T S++ AC+S+ A +G +H+ ++ L +++ + ALV
Sbjct: 292 ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE-RGLDSEVAVATALV 350
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK---ASSVKSARLMFTKMLERNVVS 352
+MYAKCG L EAR VF+ M R+ V+ ++++ YA + AR +F ++ R+ +S
Sbjct: 351 NMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIS 410
Query: 353 WNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WNA+I Y QNG A+ +FR + + P TF +L ACA+L L + H +
Sbjct: 411 WNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQI 470
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ L ES++ V N+LI+MY +CGS+E+ R+F E+ VSW AM+ +Q G
Sbjct: 471 SESEL------ESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL LF++M L G KPD VT +L C+H G +E+G +YF+ M++ H LAP DH+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF 584
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
MVDLLGR+G L +AK L+E+MP +PD V W + L AC++H + LGE A+++ E++P
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDP 644
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
S++ PY+ +SN+YA G W +V VRK M +RG+ K PG S+IE+ G ++ F K HP
Sbjct: 645 SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHP 704
Query: 652 LNKEIYLVLKMLTREMKRVGYVPN 675
EI L L M+ GYVP+
Sbjct: 705 RTDEICEELTRLHGLMRAAGYVPD 728
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/589 (29%), Positives = 275/589 (46%), Gaps = 112/589 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L SC V + R +H RI S+F + + N LI +Y KC L AR VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 78 DKMS--NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ M +NV +W N+M++ +AQ+ +EA
Sbjct: 66 ESMDWRQRNVVSW-------------------------------NAMIAAYAQNGHSTEA 94
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L + +M+ + +F S L AC+ G ++H + S S + +AL+ M
Sbjct: 95 LVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTM 151
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + G V A+R+F ++ R+ SWN++I + Q+G S AL +F + M ++P+ T
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF-KEMKCDVKPNSTTY 210
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+S ++ EG +IHA ++ DLV+ AL++MY KCG +EAR VFD+M
Sbjct: 211 INVISGFSTPEVLPEGRKIHAEIV-ANGFDTDLVVATALINMYGKCGSSHEAREVFDKMK 269
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+R++VSWN +I Y NG+ EAL L++
Sbjct: 270 -------------------------------KRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L E T TF ++L AC+++ L GR H+H+++ GL +S++ V +L++M
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGL------DSEVAVATALVNM 352
Query: 436 YMKCGSVEDGCRIFETMVERD---W-------------------------------VSWN 461
Y KCGS+E+ ++F M RD W +SWN
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWN 412
Query: 462 AMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
AMI QNG A+ +F++M G KPD VT I VL AC+ G + E + + +S
Sbjct: 413 AMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS- 471
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
E L ++++ R G L+EA+ L A + V W +++AA
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAK-EKTVVSWTAMVAA 519
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 226/491 (46%), Gaps = 106/491 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S+ + ++ + + + R++HA I+ + F +++ + LI++Y KCG + AR+VF
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVF 265
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM +++ + WN M+ + + F EAL
Sbjct: 266 DKMKKRDMVS-------------------------------WNVMIGCYVLNGDFHEALE 294
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ K+ E F ++ +F S L AC+ G VH+ + + S+V + +AL++MY
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354
Query: 198 KCGRVSCARRVFDGMRERNIV----------------------------------SWNSL 223
KCG + AR+VF+ M+ R+ V SWN++
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAM 414
Query: 224 ITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
IT Y QNG A A+++F M A+G++PD VT +V+ ACASL E +HA++ E
Sbjct: 415 ITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESE 474
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L +++V+ N L++MYA+CG L EA +F + VVS T+MV
Sbjct: 475 -LESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV---------------- 517
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
A ++Q G EAL LF+ + E V P T+ ++L C + L+
Sbjct: 518 ---------------AAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLE 562
Query: 403 LGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSW 460
G + T + + H L +D F +++D+ + G + D + E+M E D V+W
Sbjct: 563 QGWRYFTDMAELHAL----APTADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAW 616
Query: 461 NAMIVGCAQNG 471
+ C +G
Sbjct: 617 MTFLTACRIHG 627
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 194/428 (45%), Gaps = 87/428 (20%)
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+PD VT +V+ +C+S EG +H R+ RC + D ++GNAL+ MY KC L +AR
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERI-RCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 309 CVFDRMPI--RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
VF+ M RNVVS +M++ YA QNG +
Sbjct: 63 SVFESMDWRQRNVVSWNAMIAAYA-------------------------------QNGHS 91
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EAL L+ + + + H TF ++L AC++LA GR+ H V F SG +S
Sbjct: 92 TEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRV------FYSGLDSFQ 142
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+ N+L+ MY + GSV D R+F+++ RD SWNA+I+ +Q+G + AL +FK+M C
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KC 201
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
KP+ T I V+ S ++ EGRK + + +G T ++++ G+ G E
Sbjct: 202 DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA-NGFDTDLVVATALINMYGKCGSSHE 260
Query: 547 AKTLIEAMPMQPDAVIWG-----------------------------------SLLAACK 571
A+ + + M + D V W S+L AC
Sbjct: 261 AREVFDKMK-KRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319
Query: 572 VHRNIMLGEYVAKKLLEIE-PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+ + G V +LE S L NMYA+ G E +V M+ R V
Sbjct: 320 SVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAV---- 375
Query: 631 CSWIEILG 638
+W ++G
Sbjct: 376 -AWSTLIG 382
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/665 (36%), Positives = 381/665 (57%), Gaps = 48/665 (7%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-----L 70
+ S+P LL++C S++ + +HA++I + S+ F +RL+ A C L
Sbjct: 51 LIQSNPLLSLLEAC---TSMAKMKEIHAQMISTGLISDGFALSRLV---AFCAISEWRNL 104
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
K+ + +N NVF+WN I G+++ + + A + R N + G A D
Sbjct: 105 DYCDKILNNAANLNVFSWNMAIR-----GYVESENPINAVLLYR-----NMLRKGSAIPD 154
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
++ L + V CAG ++ + + + SD+++ +
Sbjct: 155 NYTYPLLFKV--------------------CAGFSLSWTANEILGHVIQLGFDSDLFVHN 194
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
A+I + CG + AR++FD R++VSWNS+I Y + G A +A +++ +M + P
Sbjct: 195 AIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP 254
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DEVT+ VVSA A L G ++H + L + L NAL+DMY KC + A+ +
Sbjct: 255 DEVTMIGVVSASAQLENLALGRKLHQSIEEM-GLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F+ M + VVS T+MV GYAK ++SA +F +M E++VV WNALI G+ Q ++EAL
Sbjct: 314 FENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEAL 373
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ SV P T N L+AC+ L L +G H +V KH L ++ +G
Sbjct: 374 ALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM------NVALGT 427
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+DMY KCG+++ ++FE M R+ ++W A+I G A +G A+ F +M+ G P
Sbjct: 428 ALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D +T IGVL AC H GLV++GR YF M+ ++G++P HY+C+VDLLGRAG L+EA+ L
Sbjct: 488 DEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL 547
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I +MP +PDAV+WG+L ++H N+ +GE A KLLE++P + G YVLL+NMY + W
Sbjct: 548 IRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMW 607
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+ +VRK+M +RGV K PGCS IE+ G V F+++DK HP +++IY L LTR+++ +
Sbjct: 608 EQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Query: 671 GYVPN 675
P+
Sbjct: 668 EVDPS 672
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 215/466 (46%), Gaps = 54/466 (11%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A D+ + L C + +I+ F S++F+ N +I V CG L AR
Sbjct: 151 AIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAAR 210
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHD 130
K+FD+ +++ +WNSII G ++ G D+A L+ M E D+ + +VS AQ +
Sbjct: 211 KLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLE 270
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM---GTQVHALLSKSRYSSDVY 187
ALG K+H ++ E + +D + + +L ++ V
Sbjct: 271 NL--ALGR--KLHQ---SIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVV 323
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ ++ Y K G + A R+F+ M E+++V WN+LI + Q + +AL +F M AS
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD++T+ + +SAC+ L A G+ +H + + L ++ LG ALVDMYAKCG + +A
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIKKA 442
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF+ MP RN ++ T+++ G A +A F++M+ +V
Sbjct: 443 IQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV---------------- 486
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDI 426
P TF +L+AC + + GR + K+G+ +
Sbjct: 487 ---------------PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI------SPKL 525
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ L+D+ + G +E+ + +M E D V W A+ G +G
Sbjct: 526 KHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/664 (36%), Positives = 365/664 (54%), Gaps = 78/664 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ ++ SC+ S+ + VHA+I+ FA+ IF+ L+++YAK G
Sbjct: 220 DKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS-------- 271
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I+D+ +F M E +Q SWN+M+SG + EA
Sbjct: 272 -----------------------IEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFD 308
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FV+M + + Y+ S A VD MG +V S+ +V +G+ALIDMY
Sbjct: 309 LFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYS 368
Query: 198 KCGRVSCARRVFDGMRERNIVS------WNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
KCG + AR VFD N ++ WN++I+ Y Q+G + +ALE++V+M +GI D
Sbjct: 369 KCGSLHDARSVFD----TNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 424
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T SV +A A+ + + G +H +++C + + NA+ D Y+KCG L + R VF
Sbjct: 425 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVF 484
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D +M ER++VSW L+ Y+Q+ EEAL
Sbjct: 485 D-------------------------------RMEERDIVSWTTLVTAYSQSSLGEEALA 513
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
F L++ E P +TF ++L +CA+L L+ GRQ H + K GL +++ + ++
Sbjct: 514 TFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL------DTEKCIESA 567
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
LIDMY KCGS+ + ++F+ + D VSW A+I G AQ+G +AL LF++M L G K +
Sbjct: 568 LIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKAN 627
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT++ VL ACSH G+VEEG YF M +G+ P +HY C++DLLGR G LD+A I
Sbjct: 628 AVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFI 687
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
MPM+P+ ++W +LL C+VH N+ LGE A+K+L I P S YVLLSN Y E G +
Sbjct: 688 RKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYE 747
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+ + +R +M+ +GV K+PG SWI + G V+ F D++HP KEIY+ L+ L ++K +G
Sbjct: 748 DGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMG 807
Query: 672 YVPN 675
YVP+
Sbjct: 808 YVPD 811
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 258/556 (46%), Gaps = 80/556 (14%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+L C S+ + + VH ++KS F + + + N VY+KC A VFD+M
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM-- 181
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
P+R+ SW M+ G +H F + +F +M
Sbjct: 182 -----------------------------PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEM 212
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ ++++ + + +C G ++G VHA + +++ +++ ++L++MY K G +
Sbjct: 213 LNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSI 272
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
+ VF+ M E N VSWN++I+ NG +A ++FVRM P+ TL SV A
Sbjct: 273 EDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAV 332
Query: 263 ASLAAFKEGLQIHARLMRCEK---LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
L G ++ C + ++++G AL+DMY+KCG L++AR VFD I
Sbjct: 333 GKLVDVNMGKEVQ----NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 388
Query: 320 VSE--TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V+ +M+SGY +Q+G ++EAL L+ +
Sbjct: 389 VNTPWNAMISGY-------------------------------SQSGCSQEALELYVQMC 417
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + YT+ ++ NA A LQ GR H V+K GL + + V N++ D Y
Sbjct: 418 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV-----VSVNNAIADAYS 472
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +ED ++F+ M ERD VSW ++ +Q+ G EAL F M G P+ T
Sbjct: 473 KCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSS 532
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL +C+ +E GR+ + K GL K + ++D+ + G + EA + + +
Sbjct: 533 VLISCASLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-N 590
Query: 558 PDAVIWGSLLAACKVH 573
PD V W ++++ H
Sbjct: 591 PDIVSWTAIISGYAQH 606
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDL-VLGNALVDMYAKCGKLNEARCVFDR 313
L V+ CA + +E +H +++ DL VL N +Y+KC + A VFD
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP RN V SW +I G T++G + F
Sbjct: 181 MPQRN-------------------------------VFSWTVMIVGSTEHGLFFDGFKFF 209
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + P + + ++ +C L L+LG+ H +V G + IFV SL+
Sbjct: 210 CEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGF------ATHIFVSTSLL 263
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
+MY K GS+ED +F M E + VSWNAMI GC NG EA LF +M P+
Sbjct: 264 NMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMY 323
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ V A V G++ + + E G+ T ++D+ + G L +A+++ +
Sbjct: 324 TLVSVSKAVGKLVDVNMGKE-VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT 382
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 369/664 (55%), Gaps = 38/664 (5%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A D+ F +L +C +S ++++ +VH I+K F ++F++N LI Y +CG
Sbjct: 135 AVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECG------ 188
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
ID R+F M ER+ SW S++ G+A+ + E
Sbjct: 189 -------------------------EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKE 223
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ F +M + + +SACA D ++G QV + + + M +AL+D
Sbjct: 224 AVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVD 283
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG + AR++FD ++N+V +N++++ Y + G A + L V M+ G PD +T
Sbjct: 284 MYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT 343
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ S VSAC+ L G H ++R L + NA+++MY KCGK A VFDRM
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLR-NGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM 402
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+ VS S+++G+ + ++SA +F+ M + ++VSWN +I Q +EA+ LFR
Sbjct: 403 LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFR 462
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+++ E + T + +AC L L L + H ++ K + F D+ +G +L+D
Sbjct: 463 VMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHF------DMHLGTALVD 516
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
M+ +CG + ++F MV+RD +W A I A G GT A+ LF +ML G KPD V
Sbjct: 517 MFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVV 576
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +L A SH GLVE+G F SM +G+AP HY CMVDLLGRAG L EA +LI +M
Sbjct: 577 FVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSM 636
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
M+P+ VIWGSLLAAC+VH+N+ + Y A+++ E++P +G +VLLSN+YA GRW +V
Sbjct: 637 QMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVA 696
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+VR ++++G K PG S IEI G + F D+ HP I +LK + ++ +GYVP
Sbjct: 697 KVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVP 756
Query: 675 NASD 678
+ ++
Sbjct: 757 DLTN 760
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 234/494 (47%), Gaps = 83/494 (16%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
++S++ GF+ +A+ F ++ ++F LSAC S G QVH +
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K + D+++ ++LI YG+CG + C RRVFD M ERN+VSW SLI Y + G +A+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M+ GI P+ VT+ V+SACA L + G Q+ + E N L++ NALVDMY
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV-NALVDMY 285
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
KCG +++AR +FD + +++N+V +N +++
Sbjct: 286 MKCGAIDKARKIFD-------------------------------ECVDKNLVLYNTIMS 314
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Y + G E L + + + P T + ++AC+ L D+ G+ H +V+++GL
Sbjct: 315 NYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEG 374
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG------- 471
V N++I+MYMKCG E CR+F+ M+ + VSWN++I G +NG
Sbjct: 375 WDN------VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWK 428
Query: 472 ------------YGT------------EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+ T EA+ LF+ M G D VTM+GV AC + G
Sbjct: 429 IFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGA 488
Query: 508 VEEGRKYFSSMSKEHGLAPLKD-HY-----TCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
++ + HG KD H+ T +VD+ R G A + M ++ D
Sbjct: 489 LDLAKWI-------HGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVS 540
Query: 562 IWGSLLAACKVHRN 575
W + + A + N
Sbjct: 541 AWTAAIGAMAMEGN 554
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 368/648 (56%), Gaps = 39/648 (6%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
++ + N +I + G L ARK+FD+M N +W ++I+G +K+G + ++ F P
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNP 145
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
++ SW + +SG+ Q+ EA+ F+K+ ++ +F S + ACA DF +G
Sbjct: 146 FQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMS 205
Query: 173 VHALLSKSRYSSDVYMGSALI-------------------------------DMYGKCGR 201
V L+ K+ Y D+ + ++LI D+Y +
Sbjct: 206 VLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDE 265
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR+FD M +RN VSW+++I Y Q+G ++L +F RM+ G +P+ +S++SA
Sbjct: 266 LGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSA 325
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
AS+ A + G+ IH + + D+ + ++L+DMY KCG+ + R +FD + +N+VS
Sbjct: 326 LASVEALQAGMNIHGHVTKI-GFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVS 384
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+MV GY+ ++ A+ +F M RN VSW+A+IAG+ + +E +F +
Sbjct: 385 WNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGE 444
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF +LL ACA+ A L G+ H +VK G+ + D +VG +L DMY K G
Sbjct: 445 IPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGI------QCDTYVGTALTDMYAKSGD 498
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLC 500
+E ++F M +++ VSW AMI G A++G E+L LF++M P+ V + VL
Sbjct: 499 IESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLF 558
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH+GLV++G YF+SM +GL P H+TC+VD+L RAG L EA+ I +MP QP+
Sbjct: 559 ACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPET 618
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
W +LL+ CK ++N L E VA KL E+ N YVLLSN+YA GRW +V++VRKLM
Sbjct: 619 NAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLM 678
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+ +G+ K GCSW+EI V+ F +D H + EIY +L++L EMK
Sbjct: 679 KAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMK 726
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 170/410 (41%), Gaps = 104/410 (25%)
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S++ + ++G +HA L + + ++ + L+ MY K EA +
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKT-GISSEQYISIKLLIMYLNYRKSAEADQISKD 81
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL----------------- 356
++V M+S + ++ AR +F +M + N +SW AL
Sbjct: 82 FDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYF 141
Query: 357 --------------IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
I+GY QNG + EA+ LF L V P TF +++ ACANL D
Sbjct: 142 ERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFG 201
Query: 403 LGRQAHTHVVKHG---------------LR----------FLSGEESDIFVGNSLIDMYM 437
LG +VK G LR F EE D+ +++D+Y+
Sbjct: 202 LGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYV 261
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD------ 491
+ + + RIF+ M +R+ VSW+AMI Q+GY E+L LF +M+ G KP+
Sbjct: 262 EMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSS 321
Query: 492 -------------------HVTMIG-------------VLCACSHAGLVEEGRKYFSSMS 519
HVT IG + C C G ++GR F ++
Sbjct: 322 ILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKC---GETKDGRFLFDTIL 378
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+++ ++ + MV G ++EAK L MP++ + V W +++A
Sbjct: 379 EKNMVS-----WNAMVGGYSLNGHMEEAKYLFNIMPVR-NNVSWSAIIAG 422
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/653 (35%), Positives = 362/653 (55%), Gaps = 75/653 (11%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C + V+ +H +K+ + +F+ + L+D+Y K G ++ R+VF +M +NV +
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVS 184
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
W +IITGL++ G+ EAL YF +M
Sbjct: 185 WTAIITGLVRAGY-------------------------------NKEALVYFSEMWRSRV 213
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
Y+F AL ACA S G ++HA K + ++ + L MY KCG++
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F+ M R++VSW ++IT Q G A++ F+RM S + P+E T A+V+S CA+LA
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+ G Q+HA ++ L L + N+++ MYAKCG+L + +F M R++VS ++++
Sbjct: 334 IEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTII- 391
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
AGY Q G EA L ++ E PT +
Sbjct: 392 ------------------------------AGYXQGGHVSEAFELLSWMRMEGPKPTEFA 421
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
++L+AC N+A L+ G+Q H +V+ GL E V ++LI+MY KCGS+E+ R
Sbjct: 422 LASVLSACGNMAILEHGKQLHAYVLSIGL------EHTAMVLSALINMYCKCGSIEEASR 475
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF+ D VSW AMI G A++GY E + LF+K+ G +PD VT IGVL ACSHAGL
Sbjct: 476 IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGL 535
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+ G YF++MSK++ ++P K+HY CM+DLL RAG L +A+ +IEAMP D V+W +LL
Sbjct: 536 VDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC+VH ++ G A+++L++EP+ +G ++ L+N+YA G+W E +RKLM+ +GV+K
Sbjct: 596 RACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIK 655
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE------MKRVGYVP 674
+PG SWI++ V F+ D+ HP ++IY +L +L ++ G++P
Sbjct: 656 EPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLP 708
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 235/489 (48%), Gaps = 47/489 (9%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-F 147
N + L+K G + +A R+F M ++D+ SW +++SG+ + SEAL F M E+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL 112
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ + A AC + D G +H K+ + V++GSAL+DMY K G++ RR
Sbjct: 113 RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF M RN+VSW ++IT + G +AL F M S +E D T A + ACA A
Sbjct: 173 VFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGA 232
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G +IHA+ M+ + + N L MY KCGKL +F++M +R+VVS
Sbjct: 233 LNYGREIHAQAMK-KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS------ 285
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
W +I Q G+ E A+ F ++ V P YT
Sbjct: 286 -------------------------WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +++ CANLA ++ G Q H ++ GL + + V NS++ MY KCG +
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGL------AASLSVENSIMTMYAKCGQLTSSSV 374
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF M RD VSW+ +I G Q G+ +EA L M + G KP + VL AC + +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 508 VEEGRK---YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+E G++ Y S+ EH L + ++++ + G ++EA + +A D V W
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVL----SALINMYCKCGSIEEASRIFDAAE-NDDIVSWT 489
Query: 565 SLLAACKVH 573
+++ H
Sbjct: 490 AMINGYAEH 498
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 69/455 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA L +C S +++ R +HA+ +K F F+ N L +Y KCG L +F
Sbjct: 216 DSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLF 275
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KMS ++V +W +IIT L++ G +++C A+
Sbjct: 276 EKMSMRDVVSWTTIITTLVQMG--------------QEEC-----------------AVQ 304
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + + +EY+F + +S CA + G Q+HAL+ ++ + + ++++ MY
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+++ + +F M R+IVSW+++I Y Q G S+A E+ M G +P E LAS
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALAS 424
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC ++A + G Q+HA ++ +VL +AL++MY KCG + EA +FD
Sbjct: 425 VLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL-SALINMYCKCGSIEEASRIFDAAEND 483
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS T+M++GYA ++G + E + LF +
Sbjct: 484 DIVSWTAMINGYA-------------------------------EHGYSREVIDLFEKIP 512
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P TF +L+AC++ + LG + K S E +ID+
Sbjct: 513 RVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY-----GCMIDLLC 567
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G + D + E M RD V W+ ++ C +G
Sbjct: 568 RAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHG 602
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 137/355 (38%), Gaps = 79/355 (22%)
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ DL N + K G L AR +FD+M ++ +S T+++SGY A+ A L+F
Sbjct: 46 QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKN 105
Query: 345 M----------------------------------------LERNVVSWNALIAGYTQNG 364
M L +V +AL+ YT+NG
Sbjct: 106 MRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165
Query: 365 E-------------------------------NEEALGLFRLLKRESVCPTHYTFGNLLN 393
+ N+EAL F + R V YTF L
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+ L GR+ H +K G S FV N+L MY KCG +E G +FE M
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSS------FVANTLATMYNKCGKLEYGLTLFEKMS 279
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
RD VSW +I Q G A+ F +M P+ T V+ C++ +E G +
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++ GLA ++ + + G L + + M + D V W +++A
Sbjct: 340 -LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIA 392
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
DLQ+ +++ ++ ++ + F+S ++D+ N + +K G + + R+F+ M ++D +S
Sbjct: 26 DLQVLERSNDNLSQN-IHFIS--QTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEIS 82
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
W +I G +EAL LFK M + G + D + AC V G +
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYG-ELLHGY 141
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ + GL + ++D+ + G + E + + MPM+ + V W +++
Sbjct: 142 AVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR-NVVSWTAII 189
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/649 (36%), Positives = 360/649 (55%), Gaps = 76/649 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R VH ++K + S FI LID Y+ GC+ AR+VFD++S+K
Sbjct: 66 RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK--------------- 110
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
D SW M++ +A++D FSEAL +F +M F + ++F L
Sbjct: 111 ----------------DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVL 154
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC G +F G VH + K+ Y D+Y+G L+++Y +CG A R F M + +++
Sbjct: 155 KACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVI 214
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
W+ +I+ + Q+G + ALE+F +M + + P++ T +SV+ A A + + IH
Sbjct: 215 PWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHA 274
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ L D+ + NAL+ YAKCG C+ E SM
Sbjct: 275 LKA-GLSTDVFVSNALMACYAKCG------CI-----------EQSME------------ 304
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+F + +RN VSWN +I Y Q G+ E AL LF + R V T T+ ++L ACA L
Sbjct: 305 --LFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATL 362
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L+LG Q H K + G+ D+ VGN+LIDMY KCGS++D +F+ + RD V
Sbjct: 363 AALELGLQVHCLTAKT----IYGQ--DVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKV 416
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I G + +G G EA+ +F M KPD +T +GVL ACS+ G ++EG++YF+SM
Sbjct: 417 SWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSM 476
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+++G+ P +HYTCMV L+GR+G LD+A IE +P +P +IW +LL AC +H ++ L
Sbjct: 477 KQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVEL 536
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G A+++LE+EP + +VLLSN+YA RWG V VRK M+++GV K+PG SWIE G
Sbjct: 537 GRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQG 596
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP-------NASDDE 680
+V+ F V D H K I +L+ L + ++ GY P + DDE
Sbjct: 597 NVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDE 645
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 191/388 (49%), Gaps = 63/388 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L +CL ++ + VH ++K+ + ++++ L+++Y +CG D
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCG---------DN-- 198
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DDA R F MP+ D W+ M+S FAQ + +AL F +
Sbjct: 199 --------------------DDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++++F S L A A + +H K+ S+DV++ +AL+ Y KCG
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ + +F+ + +RN VSWN++I Y Q G AL +F M+ ++ EVT +S++ A
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+LAA + GLQ+H L D+ +GNAL+DMYAKCG + +AR +FD + +R+ VS
Sbjct: 359 CATLAALELGLQVHC-LTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
WNA+I GY+ +G EA+ +F L+K
Sbjct: 418 -------------------------------WNAIICGYSMHGLGVEAIKMFNLMKETKC 446
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHT 409
P TF +L+AC+N L G+Q T
Sbjct: 447 KPDELTFVGVLSACSNTGRLDEGKQYFT 474
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
++F +M ERN VS+ LI GY Q+ + EA LF L E + F +L ++
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+LGR H V+K G S+ F+G +LID Y G V +F+ + +D VS
Sbjct: 61 WAELGRIVHGCVLK------VGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVS 114
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W MI A+N +EAL F +M + G KP++ T GVL AC + G+ S+
Sbjct: 115 WTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVL 174
Query: 520 KEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K + +D Y +++L R G D+A MP + D + W +++
Sbjct: 175 KTN---YERDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPWSFMIS 221
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 358/662 (54%), Gaps = 71/662 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +C V R+VHA +KS+ S++ +QN L+ +Y+K G
Sbjct: 151 DQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG--------- 201
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+DD LF + ++D SW S+++GFAQ EAL
Sbjct: 202 ----------------------LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E + +E+ FGSA AC ++ G Q+H L K R D+Y+G +L DMY
Sbjct: 240 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+C + AR F + ++VSWNS++ Y G S+AL +F M SG+ PD +T+
Sbjct: 300 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC A G IH+ L++ L D+ + N+L+ MYA+C
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARC--------------- 403
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
S + SA +F ++ +++VV+WN+++ Q+ EE L LF LL
Sbjct: 404 ----------------SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLL 447
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + N+L+A A L ++ +Q H + K GL D + N+LID Y
Sbjct: 448 NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLV------DDRMLSNTLIDTY 501
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCGS++D R+FE M RD SW+++IVG AQ GY EA LF +M G +P+HVT
Sbjct: 502 AKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTF 561
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IGVL ACS G V EG Y+S M E+G+ P ++H +C+VDLL RAG L EA I+ MP
Sbjct: 562 IGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMP 621
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD ++W +LLAA K+H ++ +G+ A+ +L I+PS+S YVLL N+YA G W E R
Sbjct: 622 FEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFAR 681
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++K MR GV K PG SW+++ G + VF+V+D+ HP ++EIY +L+++ EM + GYVP
Sbjct: 682 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVPK 741
Query: 676 AS 677
S
Sbjct: 742 HS 743
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 364/661 (55%), Gaps = 73/661 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C +++ D R++H + K F ++F+ LI +Y++
Sbjct: 174 DFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSR----------- 219
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+GF+ A LF MP RD SWN+M+SG Q+ ++AL
Sbjct: 220 --------------------FGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 259
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M E + + S L CA D T +H + K ++++ +ALI+MY
Sbjct: 260 VLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYA 319
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A++VF M R++VSWNS+I YEQN A F +M +G+EPD +TL S
Sbjct: 320 KFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVS 379
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S A +K +H +MR L +V+GNA++DMYAK G ++
Sbjct: 380 LASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVID------------ 427
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
SA +F + ++VVSWN LI+GYTQNG EA+ ++R+++
Sbjct: 428 -------------------SAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMME 468
Query: 378 R-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ T+ ++L A A++ LQ G + H H++K L D+FVG LID+Y
Sbjct: 469 ECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL------DVFVGTCLIDLY 522
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG + D +F + V WNA+I +G+G +AL LF++M G KPDHVT I
Sbjct: 523 GKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFI 582
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH+GLV+EG+ +F M +E+G+ P HY CMVDLLGRAG L+ A I+ MP+
Sbjct: 583 SLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPL 641
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
PDA IWG+LL AC++H NI LG++ + +L E++ N G YVLLSN+YA +G+W V +V
Sbjct: 642 HPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKV 701
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R L R+RG+ K PG S IE+ V++F ++ HP KEIY L++LT +MK +GY+P+
Sbjct: 702 RSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDY 761
Query: 677 S 677
S
Sbjct: 762 S 762
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 249/513 (48%), Gaps = 78/513 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS A +L C + +S +H +IK E+F+ N LI++YAK G L A+KV
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +M ++V +WNSII + + Q+D A
Sbjct: 331 FQQMFLRDVVSWNSII-------------------------------AAYEQNDDPVTAR 359
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDM 195
G+F KM + S S A S D+K VH + + + + V +G+A++DM
Sbjct: 360 GFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDM 419
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GIEPDEV 253
Y K G + A +VF+ + +++VSWN+LI+ Y QNG AS+A+EV+ RMM I+ ++
Sbjct: 420 YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLNQG 478
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S+++A A + A ++G++IH L++ L D+ +G L+D+Y KCG+L +A C+F +
Sbjct: 479 TWVSILAAYAHVGALQQGMRIHGHLIKT-NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQ 537
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P E+S V WNA+I+ + +G E+AL LF
Sbjct: 538 VP-----RESS--------------------------VPWNAIISCHGIHGHGEKALKLF 566
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R ++ E V P H TF +LL+AC++ + G+ + ++G++ + ++
Sbjct: 567 REMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIK------PSLKHYGCMV 620
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
D+ + G +E + M + D W A++ C +G LG F L ++
Sbjct: 621 DLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGAC--RIHGNIELGKFASDRLFEVDSEN 678
Query: 493 VTMIGVLCACSHAGLVE-EGRKYFSSMSKEHGL 524
V VL + +A + + EG S+++E GL
Sbjct: 679 VGYY-VLLSNIYANVGKWEGVDKVRSLARERGL 710
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 232/485 (47%), Gaps = 78/485 (16%)
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
E F S +C ++ + ++HALL S ++ L+++Y G VS +R FD
Sbjct: 76 EIDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVR-MMASGIEPDEVTLASVVSACASLAAFK 269
++ +++ +WNS+I+ Y +NG +A++ F + ++ + + D T V+ AC +L
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV--- 189
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
+G +IH + + + D+ + +L+ MY++ G + AR +FD MP R
Sbjct: 190 DGRKIHCWVFKL-GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR------------ 236
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
++ SWNA+I+G QNG +AL + ++ E + T
Sbjct: 237 -------------------DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVA 277
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++L CA L D+ H +V+KHGL F ++FV N+LI+MY K G++ D ++F
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEF------ELFVSNALINMYAKFGNLGDAQKVF 331
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M RD VSWN++I QN A G F KM L G +PD +T++ S A +
Sbjct: 332 QQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLV------SLASIAA 385
Query: 510 EGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ R Y +S S HG + ++D+ + G +D A + +P++ D V
Sbjct: 386 QSRDYKNSRSV-HGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVS 443
Query: 563 WGSLLA----------ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
W +L++ A +V+R M+ E KL N G +V + YA +G +
Sbjct: 444 WNTLISGYTQNGLASEAIEVYR--MMEECREIKL------NQGTWVSILAAYAHVGALQQ 495
Query: 613 VVRVR 617
+R+
Sbjct: 496 GMRIH 500
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 358/662 (54%), Gaps = 71/662 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +C V R+VHA +KS+ S++ +QN L+ +Y+K G
Sbjct: 134 DQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG--------- 184
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+DD LF + ++D SW S+++GFAQ EAL
Sbjct: 185 ----------------------LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 222
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E + +E+ FGSA AC ++ G Q+H L K R D+Y+G +L DMY
Sbjct: 223 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+C + AR F + ++VSWNS++ Y G S+AL +F M SG+ PD +T+
Sbjct: 283 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 342
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC A G IH+ L++ L D+ + N+L+ MYA+C
Sbjct: 343 GLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARC--------------- 386
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
S + SA +F ++ +++VV+WN+++ Q+ EE L LF LL
Sbjct: 387 ----------------SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLL 430
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + N+L+A A L ++ +Q H + K GL D + N+LID Y
Sbjct: 431 NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLV------DDRMLSNTLIDTY 484
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCGS++D R+FE M RD SW+++IVG AQ GY EA LF +M G +P+HVT
Sbjct: 485 AKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTF 544
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IGVL ACS G V EG Y+S M E+G+ P ++H +C+VDLL RAG L EA I+ MP
Sbjct: 545 IGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMP 604
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD ++W +LLAA K+H ++ +G+ A+ +L I+PS+S YVLL N+YA G W E R
Sbjct: 605 FEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFAR 664
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++K MR GV K PG SW+++ G + VF+V+D+ HP ++EIY +L+++ EM + GYVP
Sbjct: 665 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVPK 724
Query: 676 AS 677
S
Sbjct: 725 HS 726
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE-ESDIFVGNSLIDMYMKCGSVEDGC 446
+ L++AC+ L L GR+ H H+V + + +GN LI MY
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMY---------- 96
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
R+ VSW ++I QNG +ALGLF ML G D + + AC+ G
Sbjct: 97 -------GRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 507 LVEEGRK-YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
V GR+ + ++ E G + + +V + + G +D+ L E + D + WGS
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQN--ALVTMYSKNGLVDDGFMLFERIK-DKDLISWGS 206
Query: 566 LLAA 569
++A
Sbjct: 207 IIAG 210
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 370/661 (55%), Gaps = 44/661 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF L +C +S++ + ++H I+K +A ++F+QN L+ YA+CG L ARKVFD+M
Sbjct: 138 PFG--LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM 195
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +NV +W S+I G + F DA LF M ++ + NS+
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV------------------ 237
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ +SACA D + G +V+A + S + M SAL+DMY KC
Sbjct: 238 ------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+R+FD N+ N++ + Y + G +AL VF MM SG+ PD +++ S +S
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 261 ACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+C+ L G H ++R E N + NAL+DMY KC + + A +FDRM +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDN---ICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLK 377
VV+ S+V+GY + V +A F M E+N+VSWN +I+G Q EEA+ +F +
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E V T ++ +AC +L L L + + ++ K+G++ D+ +G +L+DM+
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL------DVRLGTTLVDMFS 516
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG E IF ++ RD +W A I A G A+ LF M+ G KPD V +G
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L ACSH GLV++G++ F SM K HG++P HY CMVDLLGRAG L+EA LIE MPM+
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ VIW SLLAAC+V N+ + Y A+K+ + P +G YVLLSN+YA GRW ++ +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++G+ K PG S I+I G + F D+ HP I +L +++ +G+VP+ S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 678 D 678
+
Sbjct: 757 N 757
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 225/453 (49%), Gaps = 46/453 (10%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS++ G+A +EA+ F++M + + +Y+F LSACA S G Q+H L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K Y+ D+++ ++L+ Y +CG + AR+VFD M ERN+VSW S+I Y + A DA++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 239 VFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F RM+ + P+ VT+ V+SACA L + G +++A + NDL++ +ALVDM
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDM 280
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KC ++ A+ +FD N+ +M S Y +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-------------------------- 314
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G EALG+F L+ V P + + +++C+ L ++ G+ H +V+++G
Sbjct: 315 -----QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF- 368
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
ES + N+LIDMYMKC + RIF+ M + V+WN+++ G +NG A
Sbjct: 369 -----ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
F+ M + + V+ ++ L EE + F SM + G+ +
Sbjct: 424 ETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 538 LGRAGCLDEAKTL---IEAMPMQPDAVIWGSLL 567
G G LD AK + IE +Q D + +L+
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 354/605 (58%), Gaps = 41/605 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV+ S++ K G + DA R+F MP+R+ SW++MV+G+A EA F M
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 144 SE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
E SE+ + LSA + + MG Q+H L+ K V + ++L+ MY K G +
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF+ RERN ++W+++IT Y QNG A A+ +F +M A+G P E T V++A
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ L A G Q H +++ + + +ALVDMYAKCG C+ D
Sbjct: 332 SDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCG------CIAD---------- 374
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
A+ F ++ E ++V W A+++G+ QNGE+EEAL L+ + +E +
Sbjct: 375 ---------------AKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P+ T + L ACA +A L+ G+Q HT +VK+GL + VG++L MY KCG++
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP------VGSALSTMYSKCGNL 473
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
EDG +F + +RD ++WN++I G +QNG G AL LF++M + G PD++T I +LCAC
Sbjct: 474 EDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC 533
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SH GLV+ G +YFS M+K++GL P DHY CMVD+L RAG L EAK IE++ + +
Sbjct: 534 SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCL 593
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W +L AC+ R+ +G Y ++L+E+ +S Y+LLSN+YA +W +V RVR LMR
Sbjct: 594 WRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRL 653
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAY 682
RGV K PGCSW+E+ V+VF+V +++HP + I L+ L + MK GY ++S ++
Sbjct: 654 RGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGY--HSSSKLSF 711
Query: 683 EEQNG 687
+E+ G
Sbjct: 712 DEELG 716
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 258/533 (48%), Gaps = 75/533 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA +KS AS + N LI+ Y+ S+ LL F
Sbjct: 34 LHAWALKSGAASHAPVANSLINFYS------------------------SLPRPLLAAAF 69
Query: 101 IDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL-SEYSFGSA 157
+F +P RD SWNS+++ + H R +AL F M S + L S +SF +A
Sbjct: 70 A-----VFDDIPPAARDVTSWNSLLNPLSGH-RPLDALSRFRSMLSSSTVLPSPHSFAAA 123
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+A A + GT HAL K + S+VY+ ++L++MY K G VS ARRVFDGM +RN
Sbjct: 124 FTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRN 183
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIH 275
SW++++ Y + +A ++F M+ E E +V+SA + G Q+H
Sbjct: 184 SFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMH 243
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + L + + + N+LV MYAK G + A VF+ RN ++ ++M++GYA
Sbjct: 244 GLIVK-DGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYA----- 297
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
QNGE + A+ +F + PT +TF +LNA
Sbjct: 298 --------------------------QNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++L L +G+QAH +VK G E I+V ++L+DMY KCG + D F+ + E
Sbjct: 332 SDLGALAVGKQAHGLMVKLGF------EVQIYVKSALVDMYAKCGCIADAKEGFDQLYEV 385
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V W AM+ G QNG EAL L+ +M G P T+ L AC+ +E G++
Sbjct: 386 DIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLH 445
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ + K +GL + + + + G L++ ++ +P + D + W S+++
Sbjct: 446 TQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSIIS 496
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 52/410 (12%)
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRE--RNIVSWNSL 223
+ G +HA KS +S + ++LI+ Y R ++ A VFD + R++ SWNSL
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 224 ITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+ + P DAL F M++S + P + A+ +A A A+ G HA +
Sbjct: 89 LNPLSGHRPL-DALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+++ + +L++MY K G +VS+ AR +F
Sbjct: 148 SAVSNVYVCTSLLNMYCKLG----------------IVSD---------------ARRVF 176
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP---THYTFGNLLNACANLA 399
M +RN SW+ ++AGY +EEA LFRL+ E CP + + +L+A +
Sbjct: 177 DGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPL 234
Query: 400 DLQLGRQAHTHVVKHG-LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L +G Q H +VK G L F+S V NSL+ MY K G + +FE+ ER+ +
Sbjct: 235 GLLMGEQMHGLIVKDGLLDFVS-------VENSLVTMYAKAGCMGAAFHVFESSRERNSI 287
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
+W+AMI G AQNG A+ +F +M G P T +GVL A S G + G++ M
Sbjct: 288 TWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLM 347
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K G + +VD+ + GC+ +AK + + + D V+W ++++
Sbjct: 348 VKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIVLWTAMVS 395
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 31/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L++ +++ ++ H ++K F +I++++ L+D+YAKCGC+ A++ FD++
Sbjct: 324 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ W +++ SG Q+ EAL + +
Sbjct: 384 EVDIVLWTAMV-------------------------------SGHVQNGEHEEALTLYAR 412
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E S+ + S L ACAG + G Q+H + K +GSAL MY KCG
Sbjct: 413 MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGN 472
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ VF + +R++++WNS+I+ + QNG + AL++F M G PD +T +++ A
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ + G + + + + L L +VD+ ++ G L EA+ + + I
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 587
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S A L +C ++ +++H +I+K + + L +Y+KCG L VF +
Sbjct: 423 STIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRR 482
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+ +++V WNSII+G + G + A LF M
Sbjct: 483 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/707 (34%), Positives = 387/707 (54%), Gaps = 55/707 (7%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+C S + R +HAR++ + S + RLI +Y L +F +
Sbjct: 34 TCPSSSFLRALRCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPG 93
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYF-VK 141
S++ G + DA+ F ++P RD N+M+S FA+ + A+ F
Sbjct: 94 PVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHAL 153
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ S + +YSF + +SA + TQ+H + KS ++ + + +ALI +Y KC
Sbjct: 154 LGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKC 213
Query: 200 ----------------------------------GRVSCARRVFDGMRERNIVSWNSLIT 225
G V+ AR VF+ + + V WN++I+
Sbjct: 214 DTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMIS 273
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK-- 283
Y Q+G +DA E+F RM++ + DE T SV+SACA+ F G +H +++R +
Sbjct: 274 GYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNF 333
Query: 284 -LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + NALV +Y+K GK+ A+ +FD M +++VVS +++SGY + + A +F
Sbjct: 334 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVF 393
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
M +N +SW +++GY G +E+AL LF ++ E V P YT+ + AC L L+
Sbjct: 394 KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALK 453
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
GRQ H H+V+ G E+ GN+L+ MY KCG+V D +F M D VSWNA
Sbjct: 454 HGRQLHAHLVQCGF------EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNA 507
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MI Q+G+G EAL LF +M+ G PD ++ + +L AC+HAGLV+EG YF SM ++
Sbjct: 508 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 567
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
G++P +DHY ++DLLGR+G + EA+ LI+ MP +P IW ++L+ C+ + ++ G Y
Sbjct: 568 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 627
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
A +L + P + G Y+LLSN Y+ GRW + RVRKLMR RGV K+PGCSWIE+ ++V
Sbjct: 628 ADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHV 687
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQ 685
F+V D +HP +E+Y L+++ M+++GYVP+ D E +E++
Sbjct: 688 FLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKE 734
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 171/318 (53%), Gaps = 4/318 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASE--IFIQNRLIDV 63
+++V + LD F +L +C + + VH +II+ Q F E + + N L+ +
Sbjct: 289 RRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTL 348
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+K G + A+++FD M+ K+V +WN+I++G + G +D A +F MP ++ SW MV
Sbjct: 349 YSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMV 408
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
SG+ +AL F +M +E+ +Y++ A++AC K G Q+HA L + +
Sbjct: 409 SGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFE 468
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ G+AL+ MY KCG V+ AR VF M + VSWN++I+ Q+G +ALE+F +M
Sbjct: 469 ASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQM 528
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+A GI+PD ++ ++++AC EG + R + L+D+ + G+
Sbjct: 529 VAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGR 588
Query: 304 LNEARCVFDRMPIRNVVS 321
+ EAR + MP S
Sbjct: 589 IGEARDLIKTMPFEPTPS 606
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/703 (34%), Positives = 379/703 (53%), Gaps = 99/703 (14%)
Query: 57 QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ 116
N +I +AK G + AR++FD M +N+ +WNS+I L +++A +LF MP RD
Sbjct: 49 HNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL 108
Query: 117 CSW--------------------------------NSMVSGFAQHDRFSEALGYFVKMHS 144
SW N+MV+G+A++ +F EA F M +
Sbjct: 109 YSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPA 168
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM--------- 195
++ S+ S L+ + + ++G Q +++ S M +++
Sbjct: 169 KDLV----SWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEF 224
Query: 196 ------------------YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ + G+++ ARR+FD M RN+V+WN++I Y QN +A+
Sbjct: 225 FEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAI 284
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI---------------------HA 276
+F+ M E + ++ +V++ + E Q+ +
Sbjct: 285 SLFMEM----PEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNK 340
Query: 277 RLMRCEKLRN-----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
R+ ++ N D+V N ++ Y++CG+++EA +F +M +++VS +MV+ YA+
Sbjct: 341 RMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQ 400
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ +A +F +M E+N+VSWN+LI+G TQNG +AL F L+ E P TF
Sbjct: 401 VGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACG 460
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L++CA+LA LQ+G+Q H V+K SG +D+FV N+LI MY KCGS+ +F+
Sbjct: 461 LSSCAHLAALQVGKQLHQLVMK------SGYATDLFVSNALITMYAKCGSISSAELLFKD 514
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ D VSWN++I A NG G EAL LF KM + G PD VT +G+L ACSH GL+++G
Sbjct: 515 IDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQG 574
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
K F M + + + PL +HY CMVDLLGRAG L+EA L+ M + +A IWG+LL AC+
Sbjct: 575 LKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACR 634
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H N+ L ++ A+KLLE EP + YVLLSNM AE GRW EV RVR+LM+++G KQPG
Sbjct: 635 IHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGW 694
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
SWIE+ V+ F+ +D HP E+ +L+ LT M+ P
Sbjct: 695 SWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAKCP 737
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 262/551 (47%), Gaps = 49/551 (8%)
Query: 49 QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLF 108
+ S +F N I K G + A KVF M++KN T NS+I+ K G I DA +LF
Sbjct: 10 EHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLF 69
Query: 109 ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFK 168
MP+R+ SWNSM++ + +DR EA F KM + + YS+ ++ + +
Sbjct: 70 DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL----YSWTLMITCYTRNGELA 125
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
+ LL Y + +A++ Y K + ARR+FD M +++VSWNS++T Y
Sbjct: 126 KARNLFNLLP---YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYT 182
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-D 287
+NG L+ F +E+ VVS + F E +++ EK+ N +
Sbjct: 183 RNGEMRLGLQFF----------EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPN 232
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
V ++ +A+ GK+ EAR +FD+MPIRNVV+ +M++ Y + V A +F +M E
Sbjct: 233 TVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE 292
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLK-RESVCPTHYTFGNLLN------------- 393
+N +SW +I GY + G+ +EA L + R T G + N
Sbjct: 293 KNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQI 352
Query: 394 -----ACANL---ADLQLGRQAHT-HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
C N Q GR H+ K ++ DI N+++ Y + G ++
Sbjct: 353 SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK------KDIVSWNTMVASYAQVGQMDA 406
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+IFE M E++ VSWN++I G QNG +AL F M G+KPD T L +C+H
Sbjct: 407 AIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAH 466
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
++ G++ + K G A ++ + + G + A+ L + + D V W
Sbjct: 467 LAALQVGKQLHQLVMKS-GYATDLFVSNALITMYAKCGSISSAELLFKDID-HFDVVSWN 524
Query: 565 SLLAACKVHRN 575
SL+AA ++ N
Sbjct: 525 SLIAAYALNGN 535
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 169/300 (56%), Gaps = 4/300 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q++ + + + + ++ +++K + D R++ +I ++ N +I Y++C
Sbjct: 315 RQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQIS----IRDVVCWNTMIAGYSQC 370
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + A +F +M K++ +WN+++ + G +D A ++F M E++ SWNS++SG
Sbjct: 371 GRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLT 430
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+ + +AL F+ M E + +F LS+CA ++G Q+H L+ KS Y++D++
Sbjct: 431 QNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLF 490
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +ALI MY KCG +S A +F + ++VSWNSLI Y NG +AL++F +M G
Sbjct: 491 VSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEG 550
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PDEVT ++SAC+ + +GL++ +++ + +VD+ + G+L EA
Sbjct: 551 VAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEA 610
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 227/521 (43%), Gaps = 110/521 (21%)
Query: 16 FLDSSPFAKLL--DSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
D+ P L+ +S L + + R+ + + ++ N ++D + + G L +
Sbjct: 162 LFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSS 221
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+ F+K+ N N +W +++ G ++G I +A RLF MP R+ +WN+M++ + Q+
Sbjct: 222 WEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVD 281
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS--------- 184
EA+ F++M +N S + G V + LL++ Y +
Sbjct: 282 EAISLFMEMPEKNSI-------SWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMIS 334
Query: 185 ---------------------DVYMGSALIDMYGKCGR---------------------- 201
DV + +I Y +CGR
Sbjct: 335 GYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTM 394
Query: 202 ---------VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ A ++F+ M+E+NIVSWNSLI+ QNG DAL+ F+ M G +PD+
Sbjct: 395 VASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQ 454
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T A +S+CA LAA + G Q+H +M+ DL + NAL+ MYAKCG ++ A +F
Sbjct: 455 STFACGLSSCAHLAALQVGKQLHQLVMK-SGYATDLFVSNALITMYAKCGSISSAELLFK 513
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ +VVS S+++ YA NG EAL L
Sbjct: 514 DIDHFDVVSWNSLIAAYA-------------------------------LNGNGREALKL 542
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNS 431
F ++ E V P TF +L+AC+++ + G + +V+ + + L+ +
Sbjct: 543 FHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYA------C 596
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
++D+ + G +E+ ++ M + + W A++ C +G
Sbjct: 597 MVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 637
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 217/458 (47%), Gaps = 47/458 (10%)
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+L S + S V+ + I GK G++ A +VF M +N V+ NS+I+ + +NG S
Sbjct: 4 SLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRIS 63
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI-HARLMRCEKLRNDLVLGNA 293
DA ++F D + ++VS + +AA+ ++ AR + + DL
Sbjct: 64 DARQLF----------DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTL 113
Query: 294 LVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++ Y + G+L +AR +F+ +P + N V +MV+GYAK AR +F M +++VS
Sbjct: 114 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 173
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN+++ GYT+NGE L F + V ++ +++ + DL + +
Sbjct: 174 WNSMLTGYTRNGEMRLGLQFFEEMAERDVV----SWNLMVDGFVEVGDLNSSWEFFEKI- 228
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ +++ + + G + + R+F+ M R+ V+WNAMI QN +
Sbjct: 229 ---------PNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCH 279
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EA+ LF +M + + ++ V+ G ++E R+ + M + A T
Sbjct: 280 VDEAISLFMEM----PEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQ-----T 330
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC----KVHRNIMLGEYVAKKLLE 588
M+ + +D+A+ + + ++ D V W +++A ++ + L + + KK +
Sbjct: 331 AMISGYVQNKRMDDARQIFNQISIR-DVVCWNTMIAGYSQCGRMDEALHLFKQMVKK--D 387
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
I N+ + YA++G+ +++ + M+++ +V
Sbjct: 388 IVSWNT-----MVASYAQVGQMDAAIKIFEEMKEKNIV 420
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K L+ + S +F N I K G +++ ++F+ M ++ V+ N+MI A+NG
Sbjct: 1 MKSSLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNG 60
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
++A LF M + + V+ ++ A H VEE R+ F M P +D Y
Sbjct: 61 RISDARQLFDGM----PQRNIVSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLY 109
Query: 532 --TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
T M+ R G L +A+ L +P + + V +++A +R
Sbjct: 110 SWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQF 156
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 354/605 (58%), Gaps = 41/605 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV+ S++ K G + DA R+F MP+R+ SW++MV+G+A EA F M
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 144 SE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
E SE+ + LSA + + MG Q+H L+ K V + ++L+ MY K G +
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF+ RERN ++W+++IT Y QNG A A+ +F +M A+G P E T V++A
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ L A G Q H +++ + + +ALVDMYAKCG C+ D
Sbjct: 332 SDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCG------CIAD---------- 374
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
A+ F ++ E ++V W A+++G+ QNGE+EEAL L+ + +E +
Sbjct: 375 ---------------AKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P+ T + L ACA +A L+ G+Q HT +VK+GL + VG++L MY KCG++
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP------VGSALSTMYSKCGNL 473
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
EDG +F + +RD ++WN++I G +QNG G AL LF++M + G PD++T I +LCAC
Sbjct: 474 EDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC 533
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SH GLV+ G +YFS M+K++GL P DHY CMVD+L RAG L EAK IE++ + +
Sbjct: 534 SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCL 593
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W +L AC+ R+ +G Y ++L+E+ +S Y+LLSN+YA +W +V RVR LMR
Sbjct: 594 WRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRL 653
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAY 682
RGV K PGCSW+E+ V+VF+V +++HP + I L+ L + MK GY ++S ++
Sbjct: 654 RGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGY--HSSSKLSF 711
Query: 683 EEQNG 687
+E+ G
Sbjct: 712 DEELG 716
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 259/533 (48%), Gaps = 75/533 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA +KS AS + N LI+ Y+ S+ LL F
Sbjct: 34 LHAWALKSGAASHAPVANSLINFYS------------------------SLPRPLLAAAF 69
Query: 101 IDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL-SEYSFGSA 157
+F +P RD SWNS+++ ++H R +AL F M S + L S +SF +A
Sbjct: 70 A-----VFDDIPPAARDVASWNSLLNPLSRH-RPLDALSRFRSMLSSSTVLPSPHSFAAA 123
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+A A + GT HAL K + S+VY+ ++L++MY K G VS ARR+FDGM +RN
Sbjct: 124 FTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRN 183
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIH 275
SW++++ Y + +A ++F M+ E E +V+SA + G Q+H
Sbjct: 184 SFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMH 243
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + L + + + N+LV MYAK G + A VF+ RN ++ ++M++GYA
Sbjct: 244 GLIVK-DGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYA----- 297
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
QNGE + A+ +F + PT +TF +LNA
Sbjct: 298 --------------------------QNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++L L +G+QAH +VK G E I+V ++L+DMY KCG + D F+ + E
Sbjct: 332 SDLGALAVGKQAHGLMVKLGF------EVQIYVKSALVDMYAKCGCIADAKEGFDQLYEV 385
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V W AM+ G QNG EAL L+ +M G P T+ L AC+ +E G++
Sbjct: 386 DIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLH 445
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ + K +GL + + + + G L++ ++ +P + D + W S+++
Sbjct: 446 TQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSIIS 496
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 197/410 (48%), Gaps = 52/410 (12%)
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRE--RNIVSWNSL 223
+ G +HA KS +S + ++LI+ Y R ++ A VFD + R++ SWNSL
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 224 ITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+ ++ P DAL F M++S + P + A+ +A A A+ G HA +
Sbjct: 89 LNPLSRHRPL-DALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIP 147
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+++ + +L++MY K G +VS+ AR MF
Sbjct: 148 SAVSNVYVCTSLLNMYCKLG----------------IVSD---------------ARRMF 176
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP---THYTFGNLLNACANLA 399
M +RN SW+ ++AGY +EEA LFRL+ E CP + + +L+A +
Sbjct: 177 DGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE--CPSEKSEFVATAVLSAVSVPL 234
Query: 400 DLQLGRQAHTHVVKHG-LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L +G Q H +VK G L F+S V NSL+ MY K G + +FE+ ER+ +
Sbjct: 235 GLLMGEQMHGLIVKDGLLDFVS-------VENSLVTMYAKAGCMGAAFHVFESSRERNSI 287
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
+W+AMI G AQNG A+ +F +M G P T +GVL A S G + G++ M
Sbjct: 288 TWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLM 347
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K G + +VD+ + GC+ +AK + + + D V+W ++++
Sbjct: 348 VKL-GFEVQIYVKSALVDMYAKCGCIADAKEGFDQL-YEVDIVLWTAMVS 395
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 31/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L++ +++ ++ H ++K F +I++++ L+D+YAKCGC+ A++ FD++
Sbjct: 324 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 383
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ W +++ SG Q+ EAL + +
Sbjct: 384 EVDIVLWTAMV-------------------------------SGHVQNGEHEEALTLYAR 412
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E S+ + S L ACAG + G Q+H + K +GSAL MY KCG
Sbjct: 413 MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGN 472
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ VF + +R++++WNS+I+ + QNG + AL++F M G PD +T +++ A
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ + G + + + + L L +VD+ ++ G L EA+ + + I
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 587
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S A L +C ++ +++H +I+K + + L +Y+KCG L VF +
Sbjct: 423 STIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRR 482
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+ +++V WNSII+G + G + A LF M
Sbjct: 483 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 514
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/690 (33%), Positives = 371/690 (53%), Gaps = 69/690 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+ ++ + C+ + + +H II++ E F+ N ++ YA AR+VFD
Sbjct: 3 SNYYSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFD 62
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL-G 137
+ N+F+WN+++ K G + + R F +P+RD +WN ++ G++ A+
Sbjct: 63 GIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 122
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
Y M + L+ + + L + + +G Q+H + K + S + +GS L+DMY
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 198 KCGRVSCARRVFDGMRERNIV------------------------------SWNSLITCY 227
K G +S A++VF G+ +RN V SW+++I
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGL 242
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
QNG +A+E F M G++ D+ SV+ AC L A +G QIHA ++R L++
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTN-LQDH 301
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ +G+AL+DMY KC L+ A+ VFD +M +
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFD-------------------------------RMKQ 330
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+NVVSW A++ GY Q G EA+ +F ++R + P HYT G ++ACAN++ L+ G Q
Sbjct: 331 KNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQF 390
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H + GL I V NSL+ +Y KCG ++D R+F M RD VSW AM+
Sbjct: 391 HGKAITAGLIHY------ITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
AQ G EA+ LF KM+ G KPD VT+ GV+ ACS AGLVE+G++YF M E+G+ P
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPS 504
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
HY+CM+DL R+G ++EA I MP +PDA+ W +LL+AC+ N+ +G++ A+ L+
Sbjct: 505 NGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLI 564
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++P + Y LLS++YA G+W V ++R+ M+++ V K+PG SWI+ G ++ F D
Sbjct: 565 ELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADD 624
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ P + +IY L+ L +++ GY P+ S
Sbjct: 625 ESSPYSDQIYAKLEELYQKIIDNGYKPDTS 654
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 186/373 (49%), Gaps = 43/373 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D PF +L +C +++D R++HA II++ I++ + LID+Y KC CL+ A+ V
Sbjct: 265 MDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTV 324
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M KNV +W + MV G+ Q R EA+
Sbjct: 325 FDRMKQKNVVSWTA-------------------------------MVVGYGQTGRAGEAV 353
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+ M Y+ G A+SACA + G+Q H + + + ++L+ +Y
Sbjct: 354 KIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLY 413
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + + R+F+ M R+ VSW ++++ Y Q G A +A+++F +M+ G++PD VTL
Sbjct: 414 GKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLT 473
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA----LVDMYAKCGKLNEARCVFD 312
V+SAC+ ++G Q + LM E +V N ++D++++ G++ EA +
Sbjct: 474 GVISACSRAGLVEKG-QRYFELMINEY---GIVPSNGHYSCMIDLFSRSGRIEEAMGFIN 529
Query: 313 RMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEE 368
MP R + + T+++S +++ + ++E + + L + Y G+ +
Sbjct: 530 GMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDC 589
Query: 369 ALGLFRLLKRESV 381
L R +K ++V
Sbjct: 590 VAQLRRGMKEKNV 602
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/291 (18%), Positives = 121/291 (41%), Gaps = 62/291 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + + +C S+ + + H + I + I + N L+ +Y KCG + + ++F
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLF 426
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLF------------------------ASMPE 113
++M+ ++ +W ++++ ++G +A +LF A + E
Sbjct: 427 NEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVE 486
Query: 114 RDQ----------------CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+ Q ++ M+ F++ R EA+G+ M F + +
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGM---PFRPDAIGWTTL 543
Query: 158 LSACAGSVDFKMGT-QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
LSAC + ++G +L+ + Y + L +Y G+ C ++ GM+E+N
Sbjct: 544 LSACRNKGNLEIGKWAAESLIELDPHHPAGY--TLLSSIYASKGKWDCVAQLRRGMKEKN 601
Query: 217 I--------VSWNSLITCY---EQNGPASDAL-----EVFVRMMASGIEPD 251
+ + W + + +++ P SD + E++ +++ +G +PD
Sbjct: 602 VRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPD 652
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/539 (42%), Positives = 336/539 (62%), Gaps = 46/539 (8%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S L+ C + G +VHA + K+ Y VY+ + LI +Y KC + ARRV D M
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
ERN+VSW ++I+ Y Q G AS+AL +FV M+ SG P+E T A+V+++C S + F+ G Q
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH+ +++ + + +G++L+DMYAK GK+ EAR VFD +P R+VVS T+++SGYA
Sbjct: 600 IHSLVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYA--- 655
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
Q G +EEAL LFR L+RE + + T+ ++L
Sbjct: 656 ----------------------------QLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + LA L GRQ H+HV++ L F + + NSLIDMY KCGS+ RIF++M
Sbjct: 688 ALSGLAALDHGRQVHSHVLRAKLPFY------VVLQNSLIDMYSKCGSLTYSRRIFDSMP 741
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGR 512
ER +SWNAM+VG +++G G EA+ LFK M + KPD VT + VL CSH G+ + G
Sbjct: 742 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 801
Query: 513 KYFSSM-SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ F M +++ G P +HY C+VDL GRAG ++EA I+ MP +P A IWGSLL AC+
Sbjct: 802 EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 861
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH+N+ +GE+VA++LLEIE N+G YV+LSN+YA GRW +V VR+LM+++ V+K+PG
Sbjct: 862 VHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGR 921
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
SWIE+ ++ F D+ HP +E++ ++ L+ ++K GYVP S DDE E+
Sbjct: 922 SWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEK 980
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 236/448 (52%), Gaps = 69/448 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C+ ++ + +RVHA +IK+ + ++++ RLI +Y KC CL AR+V D+M
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NV +W ++I+G ++Q SEAL FV+
Sbjct: 540 ERNVVSWTAMISG-------------------------------YSQRGYASEALHLFVE 568
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M A +E++F + L++C S F++G Q+H+L+ K+ + S +++GS+L+DMY K G+
Sbjct: 569 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 628
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARRVFDG+ ER++VS ++I+ Y Q G +AL++F R+ G+ + VT ASV++A
Sbjct: 629 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 688
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LAA G Q+H+ ++R KL +VL N+L+DMY+KCG L +R +FD MP R V+S
Sbjct: 689 LSGLAALDHGRQVHSHVLRA-KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS 747
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
+M+ GY+K +G EA+ LF+L+K E+
Sbjct: 748 WNAMLVGYSK-------------------------------HGLGREAVELFKLMKEENK 776
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P TF +L+ C++ G + +V G E +I ++D++ + G
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK----DGFEPEIEHYGCVVDLFGRAG 832
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGC 467
VE+ + M E W +++ C
Sbjct: 833 RVEEAFEFIKKMPFEPTAAIWGSLLGAC 860
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 170/362 (46%), Gaps = 55/362 (15%)
Query: 223 LITCYEQNGPASDAL-------EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
L++ + N P L E + M G+E + SV++ C S A +EG ++H
Sbjct: 441 LLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVH 500
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A +++ + L L+ +Y KC L +AR V D MP RNVVS T+M+SGY
Sbjct: 501 AHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY------ 553
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+Q G EAL LF + P +TF +L +C
Sbjct: 554 -------------------------SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSC 588
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ + QLGRQ H+ V+K ES IFVG+SL+DMY K G + + R+F+ + ER
Sbjct: 589 TSSSGFQLGRQIHSLVIKTSF------ESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VS A+I G AQ G EAL LF+++ G + ++VT VL A S ++ GR+
Sbjct: 643 DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702
Query: 516 SSMSKEHGLAPLKDHYTC----MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
S H L Y ++D+ + G L ++ + ++MP + + W ++L
Sbjct: 703 S-----HVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYS 756
Query: 572 VH 573
H
Sbjct: 757 KH 758
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/605 (38%), Positives = 354/605 (58%), Gaps = 41/605 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV+ S++ K G + DA R+F MP+R+ SW++MV+G+A EA F M
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 144 SE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
E SE+ + LSA + + MG Q+H L+ K V + ++L+ MY K G +
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF+ RERN ++W+++IT Y QNG A A+ +F +M A+G P E T V++A
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ L A G Q H +++ + + +ALVDMYAKCG C+ D
Sbjct: 226 SDLGALAVGKQAHGLMVKL-GFEVQIYVKSALVDMYAKCG------CIAD---------- 268
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
A+ F ++ E ++V W A+++G+ QNGE+EEAL L+ + +E +
Sbjct: 269 ---------------AKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 313
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P+ T + L ACA +A L+ G+Q HT +VK+GL + VG++L MY KCG++
Sbjct: 314 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAP------VGSALSTMYSKCGNL 367
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
EDG +F + +RD ++WN++I G +QNG G AL LF++M + G PD++T I +LCAC
Sbjct: 368 EDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC 427
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SH GLV+ G +YFS M+K++GL P DHY CMVD+L RAG L EAK IE++ + +
Sbjct: 428 SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCL 487
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W +L AC+ R+ +G Y ++L+E+ +S Y+LLSN+YA +W +V RVR LMR
Sbjct: 488 WRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRL 547
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAY 682
RGV K PGCSW+E+ V+VF+V +++HP + I L+ L + MK GY ++S ++
Sbjct: 548 RGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEGY--HSSSKLSF 605
Query: 683 EEQNG 687
+E+ G
Sbjct: 606 DEELG 610
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 201/398 (50%), Gaps = 42/398 (10%)
Query: 174 HALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
HAL K + S+VY+ ++L++MY K G VS ARRVFDGM +RN SW++++ Y
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 233 ASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ +A ++F M+ E E +V+SA + G Q+H +++ + L + + +
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVK-DGLLDFVSVE 152
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N+LV MYAK G + A VF+ RN ++ ++M++GYA
Sbjct: 153 NSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYA--------------------- 191
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
QNGE + A+ +F + PT +TF +LNA ++L L +G+QAH +
Sbjct: 192 ----------QNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLM 241
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK G E I+V ++L+DMY KCG + D F+ + E D V W AM+ G QNG
Sbjct: 242 VKLGF------EVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNG 295
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL L+ +M G P T+ L AC+ +E G++ + + K +GL
Sbjct: 296 EHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK-YGLGLGAPVG 354
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + + G L++ ++ +P D + W S+++
Sbjct: 355 SALSTMYSKCGNLEDGMSVFRRIP-DRDVIAWNSIISG 391
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 31/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L++ +++ ++ H ++K F +I++++ L+D+YAKCGC+ A++ FD++
Sbjct: 218 FVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLY 277
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ W +++ SG Q+ EAL + +
Sbjct: 278 EVDIVLWTAMV-------------------------------SGHVQNGEHEEALTLYAR 306
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E S+ + S L ACAG + G Q+H + K +GSAL MY KCG
Sbjct: 307 MDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGN 366
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ VF + +R++++WNS+I+ + QNG + AL++F M G PD +T +++ A
Sbjct: 367 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 426
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ + G + + + + L L +VD+ ++ G L EA+ + + I
Sbjct: 427 CSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITI 481
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S A L +C ++ +++H +I+K + + L +Y+KCG L VF +
Sbjct: 317 STIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRR 376
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+ +++V WNSII+G + G + A LF M
Sbjct: 377 IPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 408
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/657 (36%), Positives = 365/657 (55%), Gaps = 69/657 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S FA +L C ++H +I F + + N L+ +Y+K G L A K+F
Sbjct: 72 NSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLF 131
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M + NV TWN +I G ++ GF+D+AS LF+
Sbjct: 132 NTMPDTNVVTWNGMIAGFVQNGFMDEASLLFS---------------------------- 163
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M S + +F S L + S K G ++H + + + DV++ SALID+Y
Sbjct: 164 ---EMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYF 220
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC V A ++F +IV ++I+ Y NG +DALE+F ++ + P+ VTLAS
Sbjct: 221 KCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLAS 280
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA LA G ++HA +++ L +G+A++DMYAKCG+L+ A +F RMP
Sbjct: 281 VLPACAGLATLNLGKELHANILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-- 337
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
E++ V WNA+I +QNG+ +EA+ LFR +
Sbjct: 338 -----------------------------EKDAVCWNAIITNCSQNGKPQEAIDLFRQMG 368
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE + + L+ACANL L G+ H+ ++K +S++F ++LIDMY
Sbjct: 369 REGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAF------DSEVFAESALIDMYG 422
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ +F+ M E++ VSWN++I +G+ +L LF KML G +PDHVT +
Sbjct: 423 KCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLT 482
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC HAG V++G +YF M++E+G+ +HY C+VDL GRAG L+EA I+ MP
Sbjct: 483 ILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFS 542
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD +WG+LL AC+VH N+ L E ++ LL+++P NSG YVLLSN++A+ G+WG V ++R
Sbjct: 543 PDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIR 602
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
LM+KRGV K PG SWIE+ ++F+ D HP + +IY VL L E+++ GY P
Sbjct: 603 SLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 271/522 (51%), Gaps = 42/522 (8%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N + F +S+I + G I+DA RLF MP +D WN M++GF + + A+ F
Sbjct: 4 NVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFED 63
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + +F S LS CA + G Q+H L+ + D + +AL+ MY K G+
Sbjct: 64 MRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQ 123
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S A ++F+ M + N+V+WN +I + QNG +A +F M+++G+ PD +T AS + +
Sbjct: 124 LSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPS 183
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A+ K+G +IH ++R + D+ L +AL+D+Y KC
Sbjct: 184 VTESASLKQGKEIHGYILR-HGIALDVFLKSALIDIYFKC-------------------- 222
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
V A +F + ++V A+I+GY NG N +AL +FR L E +
Sbjct: 223 -----------RDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T ++L ACA LA L LG++ H +++KHGL + VG++++DMY KCG
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGL------DERRHVGSAIMDMYAKCGR 325
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++ +IF M E+D V WNA+I C+QNG EA+ LF++M G D V++ L A
Sbjct: 326 LDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSA 385
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C++ + G+ S M K + + + ++D+ G+ G L A+ + + M + + V
Sbjct: 386 CANLPALHHGKAIHSFMIKGAFDSEVFAE-SALIDMYGKCGNLSVARCVFDMM-REKNEV 443
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLLS 601
W S++AA H ++ + + K+LE I+P + +LS
Sbjct: 444 SWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILS 485
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 204/389 (52%), Gaps = 40/389 (10%)
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
++ D ++GS+LI +Y + G + ARR+FD M ++ V WN ++ + + G + A++VF
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M +P+ +T ASV+S CAS A + G Q+H ++ C D ++ NALV MY+K
Sbjct: 63 DMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISC-GFHFDPLVANALVAMYSKF 121
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G+L++A +F+ MP NVV+ M++G+ + + A L+F++M+ AG
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMIS----------AG-- 169
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
V P TF + L + A L+ G++ H ++++HG+
Sbjct: 170 -------------------VSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIAL--- 207
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
D+F+ ++LID+Y KC V C+IF+ D V A+I G NG +AL +F+
Sbjct: 208 ---DVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFR 264
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+L P+ VT+ VL AC+ + G++ +++ K HGL + + ++D+ +
Sbjct: 265 WLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK-HGLDERRHVGSAIMDMYAKC 323
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G LD A + MP + DAV W +++ C
Sbjct: 324 GRLDLAYQIFRRMP-EKDAVCWNAIITNC 351
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
G D FVG+SLI +Y + G +ED R+F+ M +D V WN M+ G + G A+ +F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA--------PLKDHYT 532
+ M C KP+ +T VL C+ L E G + HGL PL +
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQL-------HGLVISCGFHFDPLVAN-- 112
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+V + + G L +A L MP + V W ++A
Sbjct: 113 ALVAMYSKFGQLSDALKLFNTMP-DTNVVTWNGMIAG 148
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 380/665 (57%), Gaps = 48/665 (7%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-----L 70
+ S+P LL++C S++ + +HA++I + S+ F +RL+ A C L
Sbjct: 51 LIQSNPLLSLLEAC---TSMAKMKEIHAQMISTGLISDGFALSRLV---AFCAISEWRNL 104
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
K+ + +N N F+WN I G+++ + + A + R N + G A D
Sbjct: 105 DYCDKILNNAANLNXFSWNMAIR-----GYVESENPINAVLLYR-----NMLRKGSAIPD 154
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
++ L + V CAG ++ + + + SD+++ +
Sbjct: 155 NYTYPLLFKV--------------------CAGFSLSWTANEILGHVIQLGFDSDLFVHN 194
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
A+I + CG + AR++FD R++VSWNS+I Y + G A +A +++ +M + P
Sbjct: 195 AIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP 254
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DEVT+ VVSA A L G ++H + L + L NAL+DMY KC + A+ +
Sbjct: 255 DEVTMIGVVSASAQLENLALGRKLHQSIEEM-GLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F+ M + VVS T+MV GYAK ++SA +F +M E++VV WNALI G+ Q ++EAL
Sbjct: 314 FENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEAL 373
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ SV P T N L+AC+ L L +G H +V KH L ++ +G
Sbjct: 374 ALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTM------NVALGT 427
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+DMY KCG+++ ++FE M R+ ++W A+I G A +G A+ F +M+ G P
Sbjct: 428 ALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D +T IGVL AC H GLV++GR YF M+ ++G++P HY+C+VDLLGRAG L+EA+ L
Sbjct: 488 DEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL 547
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I +MP +PDAV+WG+L ++H N+ +GE A KLLE++P + G YVLL+NMY + W
Sbjct: 548 IRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMW 607
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+ +VRK+M +RGV K PGCS IE+ G V F+++DK HP +++IY L LTR+++ +
Sbjct: 608 EQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIEVI 667
Query: 671 GYVPN 675
P+
Sbjct: 668 EVDPS 672
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 215/466 (46%), Gaps = 54/466 (11%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A D+ + L C + +I+ F S++F+ N +I V CG L AR
Sbjct: 151 AIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAAR 210
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHD 130
K+FD+ +++ +WNSII G ++ G D+A L+ M E D+ + +VS AQ +
Sbjct: 211 KLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLE 270
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM---GTQVHALLSKSRYSSDVY 187
ALG K+H ++ E + +D + + +L ++ V
Sbjct: 271 NL--ALGR--KLHQ---SIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVV 323
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ ++ Y K G + A R+F+ M E+++V WN+LI + Q + +AL +F M AS
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS 383
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD++T+ + +SAC+ L A G+ +H + + L ++ LG ALVDMYAKCG + +A
Sbjct: 384 VAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIKKA 442
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF+ MP RN ++ T+++ G A +A F++M+ +V
Sbjct: 443 IQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV---------------- 486
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDI 426
P TF +L+AC + + GR + K+G+ +
Sbjct: 487 ---------------PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI------SPKL 525
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ L+D+ + G +E+ + +M E D V W A+ G +G
Sbjct: 526 KHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHG 571
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/652 (37%), Positives = 361/652 (55%), Gaps = 71/652 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S V +++HA++IK + +S + QN LI +Y + F
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR----------F 216
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++MS DASR+F +P +D SW+S+++GF+Q EAL
Sbjct: 217 NQMS---------------------DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 138 YFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ +M S F +EY FGS+L AC+ + G+Q+H L KS + + G +L DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG ++ ARRVFD + + SWN +I NG A +A+ VF +M +SG PD ++L
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP- 315
S++ A A +G+QIH+ +++ L DL + N+L+ MY C L C F+
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLA-DLTVCNSLLTMYTFCSDL---YCCFNLFED 431
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
RN + VSWN ++ Q+ + E L LF+L
Sbjct: 432 FRN----------------------------NADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P H T GNLL C ++ L+LG Q H + +K GL + F+ N LIDM
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL------APEQFIKNGLIDM 517
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+ RIF++M RD VSW+ +IVG AQ+G+G EAL LFK+M G +P+HVT
Sbjct: 518 YAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTF 577
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSH GLVEEG K +++M EHG++P K+H +C+VDLL RAG L+EA+ I+ M
Sbjct: 578 VGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK 637
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PD V+W +LL+ACK N+ L + A+ +L+I+P NS +VLL +M+A G W
Sbjct: 638 LEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAAL 697
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+R M+K V K PG SWIEI +++F +D HP +IY VL + +M
Sbjct: 698 LRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 272/549 (49%), Gaps = 75/549 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ +C S+S++ R++H I+ S + + N ++ +Y KCG L AR+V
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV----- 124
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F MPER+ S+ S+++G++Q+ + +EA+ ++K
Sbjct: 125 --------------------------FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E+ +++FGS + ACA S D +G Q+HA + K SS + +ALI MY + +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVS 260
+S A RVF G+ ++++SW+S+I + Q G +AL M++ G+ P+E S +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+SL G QIH ++ E L + + G +L DMYA+CG LN AR VFD+
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARCGFLNSARRVFDQ------- 330
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ER + SWN +IAG NG +EA+ +F ++
Sbjct: 331 -------------------------IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + +LL A L G Q H++++K G FL +D+ V NSL+ MY C
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG--FL----ADLTVCNSLLTMYTFC 419
Query: 440 GSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ +FE D VSWN ++ C Q+ E L LFK ML+ +PDH+TM +
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L C ++ G + S + GLAP + ++D+ + G L +A+ + ++M +
Sbjct: 480 LRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR- 537
Query: 559 DAVIWGSLL 567
D V W +L+
Sbjct: 538 DVVSWSTLI 546
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/596 (27%), Positives = 264/596 (44%), Gaps = 97/596 (16%)
Query: 120 NSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
N ++ + + + EAL F + +F + ++ S + AC+ S G ++H +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
S D + + ++ MYGKCG + AR VFD M ERN+VS+ S+IT Y QNG ++A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
++++M+ + PD+ S++ ACAS + G Q+HA++++ E + L+ NAL+ MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES-SSHLIAQNALIAMY 213
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+ ++++A VF +P+++++ SW+++IA
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLI-------------------------------SWSSIIA 242
Query: 359 GYTQNGENEEALG-LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G++Q G EAL L +L P Y FG+ L AC++L G Q H +K L
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL- 301
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ G SL DMY +CG + R+F+ + D SWN +I G A NGY EA+
Sbjct: 302 -----AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M G PD +++ +LCA + + +G + S + K LA L C L
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT---VCNSLL 413
Query: 538 LGRAGCLDE--AKTLIEAMPMQPDAVIWGSLLAACKVHRNI--MLGEYVAKKLLEIEP-- 591
C D L E D+V W ++L AC H ML + + E EP
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 592 ----------------------------SNSGPYVLLSN----MYAELGRWGEVVRVRKL 619
+ P + N MYA+ G G+ R+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
M R VV SW + +V + +E ++ K EMK G PN
Sbjct: 534 MDNRDVV-----SW-------STLIVGYAQSGFGEEALILFK----EMKSAGIEPN 573
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R+ R VS + +++ + S++K+ LM N I ++ EAL
Sbjct: 6 RLGARVSVSNSQILATSSVVSTIKTEELM------------NDHINSLCKSNFYREALEA 53
Query: 373 FRLLKRESVCPTHY-TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
F ++ S T+ +L+ AC++ L GR+ H H++ ++ D + N
Sbjct: 54 FDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKY------DTILNNH 107
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
++ MY KCGS+ D +F+ M ER+ VS+ ++I G +QNG G EA+ L+ KML PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
++ AC+ + V G++ + + K + L ++ + R + +A +
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASRVF 226
Query: 552 EAMPMQPDAVIWGSLLA 568
+PM+ D + W S++A
Sbjct: 227 YGIPMK-DLISWSSIIA 242
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 370/661 (55%), Gaps = 44/661 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF L +C +S++ + ++H I+K +A ++F+QN L+ YA+CG L ARKVFD+M
Sbjct: 138 PFG--LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM 195
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +NV +W S+I G + F DA LF M ++ + NS+
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV------------------ 237
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ +SACA D + G +V+A + S + M SAL+DMY KC
Sbjct: 238 ------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+R+FD N+ N++ + Y + G +AL VF MM SG+ PD +++ S +S
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 261 ACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+C+ L G H ++R E N + NAL+DMY KC + + A +FDRM +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDN---ICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLK 377
VV+ S+V+GY + V +A F M E+N+VSWN +I+G Q EEA+ +F +
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E V T ++ +AC +L L L + + ++ K+G++ D+ +G +L+DM+
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL------DVRLGTTLVDMFS 516
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG E IF ++ RD +W A I A G A+ LF M+ G KPD V +G
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L ACSH GLV++G++ F SM K HG++P HY CMVDLLGRAG L+EA LIE MPM+
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ VIW SLLAAC+V N+ + Y A+K+ + P +G YVLLSN+YA GRW ++ +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++G+ K PG S I+I G + F D+ HP I +L +++ +G+VP+ S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 678 D 678
+
Sbjct: 757 N 757
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 225/453 (49%), Gaps = 46/453 (10%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS++ G+A +EA+ F++M + + +Y+F LSACA S G Q+H L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K Y+ D+++ ++L+ Y +CG + AR+VFD M ERN+VSW S+I Y + A DA++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 239 VFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F RM+ + P+ VT+ V+SACA L + G +++A + NDL++ +ALVDM
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDM 280
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KC ++ A+ +FD N+ +M S Y +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-------------------------- 314
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G EALG+F L+ V P + + +++C+ L ++ G+ H +V+++G
Sbjct: 315 -----QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF- 368
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
ES + N+LIDMYMKC + RIF+ M + V+WN+++ G +NG A
Sbjct: 369 -----ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
F+ M + + V+ ++ L EE + F SM + G+ +
Sbjct: 424 ETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 538 LGRAGCLDEAKTL---IEAMPMQPDAVIWGSLL 567
G G LD AK + IE +Q D + +L+
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/586 (38%), Positives = 339/586 (57%), Gaps = 39/586 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+I K G +D A +LF + +RD SWNSM+SG + AL +FV+M
Sbjct: 592 NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ + ++++ACA +G +H K+ +S +V + L+DMY KCG ++ A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M ++ +VSW SLI Y + G DA+ +F M + G+ PD ++ SV+ ACA +
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+G +H +R + L + NAL+DMYAKCG + E
Sbjct: 772 DKGRDVH-NYIRKNNMALCLPVSNALMDMYAKCGSMEE---------------------- 808
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
A L+F+++ +++VSWN +I GY++N EAL LF +++ES P T
Sbjct: 809 ---------AYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR-PDGITM 858
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
LL AC +LA L++GR H ++++G S++ V N+LIDMY+KCGS+ +
Sbjct: 859 ACLLPACGSLAALEIGRGIHGCILRNGY------SSELHVANALIDMYVKCGSLVHARLL 912
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + E+D ++W MI GC +G G EA+ F+KM + G KPD +T +L ACSH+GL+
Sbjct: 913 FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG +F+SM E + P +HY CMVDLL R G L +A LIE MP++PDA IWG+LL
Sbjct: 973 NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLC 1032
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
C++H ++ L E VA+ + E+EP N+G YVLL+N+YAE +W EV ++R+ + KRG+ K
Sbjct: 1033 GCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKS 1092
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
PGCSWIE+ G F+ D HP K I+ +L L +MK G+ P
Sbjct: 1093 PGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSP 1138
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 213/458 (46%), Gaps = 82/458 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + + +C S+S R +H + +K+ F+ E+ N L+D+Y+KCG L A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+KM K V +W S+I ++ G DDA RL
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRL----------------------------- 742
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M S+ + YS S L ACA G VH + K+ + + + +AL+DMY
Sbjct: 743 --FYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMY 800
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A VF + ++IVSWN++I Y +N ++AL++F M PD +T+A
Sbjct: 801 AKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMA 859
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC SLAA + G IH ++R ++L + NAL+DMY KCG L AR +FD +P
Sbjct: 860 CLLPACGSLAALEIGRGIHGCILR-NGYSSELHVANALIDMYVKCGSLVHARLLFDMIPE 918
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++++ +W +I+G +G EA+ F+ +
Sbjct: 919 KDLI-------------------------------TWTVMISGCGMHGLGNEAIATFQKM 947
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL---- 432
+ + P TF ++L AC +H+ ++ G F + S+ + L
Sbjct: 948 RIAGIKPDEITFTSILYAC-----------SHSGLLNEGWGFFNSMISECNMEPKLEHYA 996
Query: 433 --IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+D+ + G++ + ETM ++ D W A++ GC
Sbjct: 997 CMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGC 1034
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 41/349 (11%)
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+ I + + G +A+E+ M+ E D +S++ CA +EG +H+ ++
Sbjct: 422 NTKICKFCEVGDLRNAVELL--RMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHS-VIS 478
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ + VLG LV MY CG L E R +FD +
Sbjct: 479 SNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHI-------------------------- 512
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+ + V WN +++ Y + G+ E++ LF+ +++ + YTF +L A L
Sbjct: 513 ----LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR 568
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ ++ H V K G + V NSLI Y K G V+ ++F+ + +RD VSW
Sbjct: 569 VGECKRIHGCVYKLGFGSYNT------VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSW 622
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+MI GC NG+ AL F +ML+ D T++ + AC++ G + GR K
Sbjct: 623 NSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVK 682
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + T ++D+ + G L++A E M Q V W SL+AA
Sbjct: 683 ACFSREVMFNNT-LLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAA 729
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/662 (36%), Positives = 358/662 (54%), Gaps = 71/662 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +C V R+VHA +KS+ S++ +QN L+ +Y+K G
Sbjct: 151 DQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG--------- 201
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+DD LF + ++D SW S+++GFAQ EAL
Sbjct: 202 ----------------------LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KM E + +E+ FGSA AC ++ G Q+H L K R D+Y+G +L DMY
Sbjct: 240 VFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 299
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ + AR F + ++VSWNS++ Y G S+AL +F M SG+ PD +T+
Sbjct: 300 ARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 359
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC A G IH+ L++ L D+ + N+L+ MYA+C
Sbjct: 360 GLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARC--------------- 403
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
S + SA +F ++ +++VV+WN+++ Q+ EE L LF LL
Sbjct: 404 ----------------SDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLL 447
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + N+L+A A L ++ +Q H + K GL D + N+LID Y
Sbjct: 448 NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLV------DDRMLSNTLIDTY 501
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCGS++D R+FE M RD SW+++IVG AQ GY EAL LF +M G +P+HVT
Sbjct: 502 AKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTF 561
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IGVL ACS G V EG Y+S M E+G+ P ++H +C+VDLL RAG L EA I+ MP
Sbjct: 562 IGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMP 621
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD ++W +LLAA K+H ++ +G+ A+ +L I+PS+S YVLL N+YA G W E R
Sbjct: 622 FEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFAR 681
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++K MR GV K PG SW+++ G + VF+V+D+ HP ++EIY +L+++ EM + GYVP
Sbjct: 682 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVPK 741
Query: 676 AS 677
S
Sbjct: 742 HS 743
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/678 (34%), Positives = 373/678 (55%), Gaps = 70/678 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
++ +P +L+ C K++ D +HA +IK++ + + L++ A
Sbjct: 19 ISLFPENPKTLILEQC---KTIRDLNEIHAHLIKTRLLLKPKVAENLLESAA-------- 67
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+L +D A +F + E D ++N M+ GF
Sbjct: 68 ---------------------ILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPH 106
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ F +MH + E++F L C+ G Q+HAL+ K + S ++ + LI
Sbjct: 107 EAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLI 166
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY CG V ARRVFD M ERN+ +WNS+ Y ++G + +++F M+ I DEV
Sbjct: 167 HMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEV 226
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL SV++AC LA + G I+ R + + L+ + L +LVDMY
Sbjct: 227 TLVSVLTACGRLADLELGEWIN-RYVEEKGLKGNPTLITSLVDMY--------------- 270
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
AK V +AR +F +M R+VV+W+A+I+GY+Q EAL LF
Sbjct: 271 ----------------AKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+++ ++ P T ++L++CA L L+ G+ H + K ++ + +G +L+
Sbjct: 315 HEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKL------TVTLGTALM 368
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
D Y KCGSVE +F M ++ +SW +I G A NG G +AL F ML +P+ V
Sbjct: 369 DFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDV 428
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T IGVL ACSHAGLV+EGR F SMS++ G+ P +HY CMVD+LGRAG ++EA I+
Sbjct: 429 TFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKN 488
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP+QP+AVIW +LLA+CKVH+N+ +GE K+L+ +EP++SG Y+LLSN+YA +GRW +
Sbjct: 489 MPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDA 548
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
++VR M+++G+ K PGCS IE+ G ++ F +D H ++EIY ++ + +++K GYV
Sbjct: 549 LKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYV 608
Query: 674 PNASDDEAYEEQNGSNST 691
PN ++ E++ S+
Sbjct: 609 PNTAEARLDAEEDDKESS 626
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 382/700 (54%), Gaps = 79/700 (11%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLL------DSCLRSKSVSDTRRVHARIIKSQFASEI 54
+++ +V Q+ ++ D P A L +S L+S +V R+ HA ++K +I
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG--RQAHALVVKMSSFGDI 153
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
++ L+ +Y K G ++D ++FA MPER
Sbjct: 154 YVDTSLVGMYCKAG-------------------------------LVEDGLKVFAYMPER 182
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYF--VKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+ +W++MVSG+A R EA+ F E + S+Y F + LS+ A ++ +G Q
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+H + K+ V + +AL+ MY KC ++ A ++FD +RN ++W++++T Y QNG
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ +A+++F RM ++GI+P E T+ V++AC+ + +EG Q+H+ L++ LG
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---------LG- 352
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
F+R ++ + T++V YAKA + AR F + ER+V
Sbjct: 353 ------------------FER----HLFATTALVDMYAKAGCLADARKGFDCLQERDVAL 390
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W +LI+GY QN +NEEAL L+R +K + P T ++L AC++LA L+LG+Q H H +
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
KHG ++ +G++L MY KCGS+EDG +F +D VSWNAMI G + NG
Sbjct: 451 KHGFGL------EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G EAL LF++ML G +PD VT + ++ ACSH G VE G YF+ MS + GL P DHY
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLL RAG L EAK IE+ + +W LL+ACK H LG Y +KL+ +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
S YV LS +Y LGR +V RV K MR GV K+ GCSWIE+ +VF+V D HP+
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 653 NKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQNGSNSTS 692
+E ++ +++R+M G+V EE+ STS
Sbjct: 685 IEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEGTQLSTS 724
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 210/409 (51%), Gaps = 53/409 (12%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G VH + ++ S+ + + L++ Y KCG+++ A +F+ + +++VSWNSLIT Y Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 230 NGPASDA---LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
NG S + +++F M A I P+ TLA + A +SL + G Q HA +++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF-G 151
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ + +LV MY K G + + VF MP RN + ++MVSGYA
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT--------------- 196
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV--CPTHYTFGNLLNACANLADLQLG 404
G EEA+ +F L RE + Y F +L++ A + LG
Sbjct: 197 ----------------RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
RQ H +K+GL + + N+L+ MY KC S+ + C++F++ +R+ ++W+AM+
Sbjct: 241 RQIHCITIKNGLLGF------VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK---- 520
G +QNG EA+ LF +M G KP T++GVL ACS +EEG++ S + K
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
H A T +VD+ +AGCL +A+ + + + D +W SL++
Sbjct: 355 RHLFAT-----TALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/627 (38%), Positives = 356/627 (56%), Gaps = 45/627 (7%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF S++ L++G + +A R+F MPERD +WN+M+SG ++ R ++A+ +
Sbjct: 99 HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGR 158
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E A + S L C D + +H K S ++++ +ALID+YGK G
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGM 218
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ A VF GM R++V+WNS+I+ EQ G + A+E+F MM SG+ PD +TL S+ SA
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A +H + R D++ GNA+VDMYAK K++ A+ VFD +P R+VVS
Sbjct: 279 VAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVS 338
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRES 380
WN LI GY QNG EA+ ++ + E
Sbjct: 339 -------------------------------WNTLITGYMQNGLANEAIRIYNDMHNHEG 367
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF ++L A + L LQ G + H +K GL D++V LID+Y KCG
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL------DVYVTTCLIDLYAKCG 421
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ + +FE M R WNA+I G +G+G +AL LF +M KPDHVT + +L
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSHAGLV++GR +F M +G+ P+ HYTCMVD+LGRAG LDEA I++MP++PD+
Sbjct: 482 ACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDS 541
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+WG+LL AC++H N+ +G+ ++ L E++P N G YVL+SNMYA++G+W V VR L+
Sbjct: 542 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLV 601
Query: 621 RKRGVVKQPGCSWIEILGHVNVFM--VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS- 677
R++ + K PG S +E+ G V+VF + + HP ++EI L L +MK GYVP+ S
Sbjct: 602 RRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSF 661
Query: 678 ----DDEAYEEQNGSNSTSDCQIDFQV 700
+E +EQ +N + I F +
Sbjct: 662 VLQDVEEDEKEQILNNHSERLAIAFGI 688
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 222/467 (47%), Gaps = 73/467 (15%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
++VG+ D+ + +L C+ + +H +K + E+F+ N LIDVY K G
Sbjct: 158 RMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A VF M+ +++ TWNSII+ + G + A LF M E C
Sbjct: 218 MLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCP---------- 267
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVY 187
L+ S SA++ C + K VH + + + D+
Sbjct: 268 ------------------DVLTLVSLASAVAQCGDELGAK---SVHCYVRRRGWDVGDII 306
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-AS 246
G+A++DMY K ++ A++VFD + +R++VSWN+LIT Y QNG A++A+ ++ M
Sbjct: 307 AGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHE 366
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++P + T SV+ A + L ++G+++HA ++ L D+ + L+D+YAKCGKL E
Sbjct: 367 GLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKT-GLNLDVYVTTCLIDLYAKCGKLVE 425
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A +F+ MP R+ WNA+IAG +G
Sbjct: 426 AMFLFEHMP-------------------------------RRSTGPWNAIIAGLGVHGHG 454
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV-VKHGLRFLSGEESD 425
+AL LF +++E + P H TF +LL AC++ + GR + +G+ ++ +
Sbjct: 455 AKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYT- 513
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
++DM + G +++ ++M ++ D W A++ C +G
Sbjct: 514 -----CMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 45/325 (13%)
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
A + PD T +V A A+ Q+HA +R L ++ +LV Y + G++
Sbjct: 62 AHPLRPDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRV 118
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
EA VFD MP R+V + +M+SG + + A + +M+
Sbjct: 119 AEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVG----------------- 161
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
E V T ++L C L D L H + VKHG LSGE
Sbjct: 162 --------------EGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHG---LSGE-- 202
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+FV N+LID+Y K G + + +F M RD V+WN++I Q G A+ LF M+
Sbjct: 203 -LFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMM 261
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAG 542
G PD +T++ + A + G E G K + G + D MVD+ +
Sbjct: 262 ESGVCPDVLTLVSLASAVAQCG-DELGAKSVHCYVRRRGWD-VGDIIAGNAMVDMYAKMS 319
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLL 567
+D A+ + + +P + D V W +L+
Sbjct: 320 KIDAAQKVFDNLPDR-DVVSWNTLI 343
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 347/576 (60%), Gaps = 7/576 (1%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D A +F +P+ + N + ++ + + L + +M ++ A+ +SF L A
Sbjct: 72 LDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKA 131
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
+ G ++H L +K + SD ++ + L+ MY CGR++ AR +FD M R++V+W
Sbjct: 132 LSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTW 191
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ +I Y Q+G +DAL +F M +EPDE+ L++V+SAC G IH +M
Sbjct: 192 SIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIME 251
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ D L +ALV MYA CG ++ A +F++M +N+V+ T+MV+GY+K +++AR
Sbjct: 252 -NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARS 310
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F +M+++++V W+A+I+GY ++ +EAL LF ++ + P T +++ ACA+L
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGA 370
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L + H V K+G + + N+LI+MY KCGS+E RIF+ M ++ +SW
Sbjct: 371 LDQAKWIHLFVDKNGF------GGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
MI A +G AL F +M +P+ +T +GVL ACSHAGLVEEGRK F SM
Sbjct: 425 TCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMIN 484
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
EH + P HY CMVDL GRA L EA L+EAMP+ P+ +IWGSL+AAC+VH I LGE
Sbjct: 485 EHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGE 544
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
+ AK+LLE++P + G +V LSN+YA+ RW +V +VRKLM+ +G+ K+ GCS E+ +
Sbjct: 545 FAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEI 604
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+ F+V D+ H EIY L + ++K VGY PN
Sbjct: 605 HEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNT 640
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 239/487 (49%), Gaps = 60/487 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F LL + R KS+ + +H K F S+ F+Q L+ +YA CG + AR +
Sbjct: 120 VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLM 179
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVS--GFAQHD 130
FDKM +++V TW+ +I G + G +DA LF M E D+ ++++S G A +
Sbjct: 180 FDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNL 239
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSAL---SACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + + F+ EN + + SAL A GS+D + L + ++
Sbjct: 240 SYGKMIHDFIM---ENNIVVDPHLQSALVTMYASCGSMDLALN------LFEKMTPKNLV 290
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+A++ Y K G++ AR VF+ M ++++V W+++I+ Y ++ +AL +F M + G
Sbjct: 291 ASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLG 350
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I+PD+VT+ SV++ACA L A + IH + + L + NAL++MYAKCG L A
Sbjct: 351 IKPDQVTMLSVITACAHLGALDQAKWIHLFVDK-NGFGGALPINNALIEMYAKCGSLERA 409
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +FD+MP +NV+S T M+S +A +G+
Sbjct: 410 RRIFDKMPRKNVISWTCMISAFA-------------------------------MHGDAG 438
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSGEESDI 426
AL F ++ E++ P TF +L AC++ ++ GR+ ++ + +H + +
Sbjct: 439 SALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNI-----TPKHV 493
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
G ++D++ + + + + E M + + + W +++ C +G LG F L
Sbjct: 494 HYG-CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAAC--RVHGEIELGEFAAKRL 550
Query: 486 CGEKPDH 492
PDH
Sbjct: 551 LELDPDH 557
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 131/301 (43%), Gaps = 41/301 (13%)
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL S +S+ SL K Q+HA+++R + R+ +L ++ A L+ A VF+
Sbjct: 25 TLFSALSSATSLTHLK---QVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNL 81
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P ET + N + +++ E E+ L ++
Sbjct: 82 IP----KPETHLC---------------------------NRFLRELSRSEEPEKTLLVY 110
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ + + ++F LL A + + L G + HGL G +SD FV L+
Sbjct: 111 ERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI------HGLAAKLGFDSDPFVQTGLV 164
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY CG + + +F+ M RD V+W+ MI G Q+G +AL LF++M +PD +
Sbjct: 165 RMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEM 224
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ VL AC AG + G K E+ + + +V + G +D A L E
Sbjct: 225 MLSTVLSACGRAGNLSYG-KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEK 283
Query: 554 M 554
M
Sbjct: 284 M 284
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 364/661 (55%), Gaps = 38/661 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL +C + ++S+ +VH ++K +IF+ N LI YA+CG
Sbjct: 129 DKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECG--------- 179
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+D +LF M ER+ SW S+++G++ D EA+
Sbjct: 180 ----------------------KVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + +SACA D ++G +V + +S+ M +AL+DMY
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR++FD +N+V +N++++ Y + ASD L + M+ G PD+VT+ S
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ACA L G HA ++R L + NA++DMY KCGK A VF+ MP +
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLR-NGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNK 396
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
VV+ S+++G + ++ A +F +MLER++VSWN +I Q EEA+ LFR ++
Sbjct: 397 TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQ 456
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + T + +AC L L L + T++ K+ + D+ +G +L+DM+
Sbjct: 457 NQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHV------DLQLGTALVDMFS 510
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG +F+ M +RD +W A I A G A+ LF +ML KPD V +
Sbjct: 511 RCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVA 570
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACSH G V++GR+ F SM K HG+ P HY CMVDLLGRAG L+EA LI++MP++
Sbjct: 571 LLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIE 630
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ V+WGSLLAAC+ H+N+ L Y A+KL ++ P G +VLLSN+YA G+W +V RVR
Sbjct: 631 PNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVR 690
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++GV K PG S IE+ G ++ F D+ H N I L+L+ + + GYVP+ +
Sbjct: 691 LQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTT 750
Query: 678 D 678
+
Sbjct: 751 N 751
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 214/455 (47%), Gaps = 70/455 (15%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+N ++ G+A +A+ +V+M +Y+F LSAC+ + G QVH +
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K D+++ ++LI Y +CG+V R++FDGM ERN+VSW SLI Y + +A+
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F +M +G+EP+ VT+ V+SACA L + G ++ + + + ++ NALVDMY
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL-GMELSTIMVNALVDMY 276
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
KCG + AR +FD +N+V +++S Y ++ +ML
Sbjct: 277 MKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEML------------ 324
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Q G P T + + ACA L DL +G+ +H +V+++GL
Sbjct: 325 ---QKGPR----------------PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEG 365
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGC-------------------------------R 447
+ N++IDMYMKCG E C R
Sbjct: 366 WDN------ISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWR 419
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF+ M+ERD VSWN MI Q EA+ LF++M G D VTM+G+ AC + G
Sbjct: 420 IFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGA 479
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
++ + + + K L+ T +VD+ R G
Sbjct: 480 LDLAKWVCTYIEKNDIHVDLQ-LGTALVDMFSRCG 513
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 44/387 (11%)
Query: 205 ARRVFDGMRERNIVS---WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
AR F G + N+ S +N LI Y G A+ ++V+M+ GI PD+ T ++SA
Sbjct: 81 ARNAF-GDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSA 139
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ + A EG+Q+H +++ L D+ + N+L+ YA+CGK++ R +FD M RNVVS
Sbjct: 140 CSKILALSEGVQVHGAVLKM-GLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVS 198
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
TS+++GY S R + ++EA+ LF + V
Sbjct: 199 WTSLINGY-------SGRDL------------------------SKEAVSLFFQMGEAGV 227
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +++ACA L DL+LG++ +++ + G+ E S I V N+L+DMYMKCG
Sbjct: 228 EPNPVTMVCVISACAKLKDLELGKKVCSYISELGM-----ELSTIMV-NALVDMYMKCGD 281
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ +IF+ ++ V +N ++ + + ++ L + +ML G +PD VTM+ + A
Sbjct: 282 ICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAA 341
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ G + G+ + + + +GL + ++D+ + G + A + E MP V
Sbjct: 342 CAQLGDLSVGKSSHAYVLR-NGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVV 399
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLE 588
W SL+A ++ L + ++LE
Sbjct: 400 TWNSLIAGLVRDGDMELAWRIFDEMLE 426
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 365/640 (57%), Gaps = 77/640 (12%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +H ++K F S++++QN LI++YA CG +
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMR--------------------------- 193
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
DA +LF P D SWNS+++G+ + EA F +M N S
Sbjct: 194 ----DARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVAS-------- 241
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+++I + GK G+V A ++F+ M E+++V
Sbjct: 242 -------------------------------NSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW++LI+ YEQNG +AL +F+ M A+G+ DEV + SV+SACA L+ K G IH +
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R + + + L NAL+ MY+ G++ +A+ +F+ + +S SM+SG K SV+ A
Sbjct: 331 IRM-GIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKA 389
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F M E+++VSW+A+I+GY Q+ E L LF ++ + P ++++AC +L
Sbjct: 390 RALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHL 449
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L G+ H ++ K+GL+ ++ +G +L+DMYMKCG VE+ +F M E+
Sbjct: 450 AALDQGKWVHAYIRKNGLKV------NVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS 503
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I+G A NG +L +F +M G P+ +T +GVL AC H GLV+EGR +F+SM
Sbjct: 504 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
++HG+ P HY CMVDLLGRAG L+EA+ LIE+MPM PD WG+LL ACK H + +
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
GE V +KL+E++P + G +VLLSN++A G W +V+ VR +M+++GVVK PGCS IE G
Sbjct: 624 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 683
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
V+ F+ DK HP ++ +L + + +K GY P+ ++
Sbjct: 684 VVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNE 723
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 193/372 (51%), Gaps = 4/372 (1%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD +L +C V + +H +I+ S + +QN LI +Y+ G + A+K+
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ N + +WNS+I+G +K G ++ A LF MPE+D SW++++SG+AQHD FSE L
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E S +SAC G VHA + K+ +V +G+ L+DMY
Sbjct: 422 ALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMY 481
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG V A VF+GM E+ + SWN+LI NG +L++F M +G+ P+E+T
Sbjct: 482 MKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 541
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ AC + EG A ++ + ++ +VD+ + G LNEA + + MP+
Sbjct: 542 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 601
Query: 317 -RNVVSETSMVSGYAKASSVKSARLMFTKMLE--RNVVSWNALIAG-YTQNGENEEALGL 372
+V + +++ K + + K++E + ++ L++ + G+ E+ L +
Sbjct: 602 APDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 661
Query: 373 FRLLKRESVCPT 384
++K++ V T
Sbjct: 662 RGMMKQQGVVKT 673
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 211/423 (49%), Gaps = 59/423 (13%)
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
++FD + N WN+++ Y Q+ A AL ++ M+ + + PD T VV ACA
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
G +IH +++ +D+ + N L++MYA CG + +AR +FD P+ + VS S++
Sbjct: 156 LEFGGKEIHDHVLKV-GFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSIL 214
Query: 327 SGYAKASSVKSARLMFTKMLERNV-------------------------------VSWNA 355
+GY K V+ A+L+F +M +RN+ VSW+A
Sbjct: 215 AGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSA 274
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
LI+GY QNG EEAL +F + + ++L+ACA+L+ ++ G+ H V++ G
Sbjct: 275 LISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334
Query: 416 LRFL-------------SGEESD---IFVG---------NSLIDMYMKCGSVEDGCRIFE 450
+ SGE D +F G NS+I MKCGSVE +F+
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M E+D VSW+A+I G AQ+ +E L LF +M L +PD ++ V+ AC+H +++
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G K+ + +++GL T ++D+ + GC++ A + M + W +L+
Sbjct: 455 G-KWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWNALIIGL 512
Query: 571 KVH 573
V+
Sbjct: 513 AVN 515
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 24/279 (8%)
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS------VKSARLMFTKMLERNVVSWN 354
C L + + +M + +S+T S K S+ + + +F ++ N WN
Sbjct: 51 CHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWN 110
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++ Y Q+ E+AL L++L+ + +V P +YT+ ++ ACA G++ H HV+K
Sbjct: 111 TMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKV 170
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G +SD++V N+LI+MY CG++ D ++F+ D VSWN+++ G + G
Sbjct: 171 GF------DSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVE 224
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
EA +F +M + + V ++ G V E K F+ M ++ ++ ++ +
Sbjct: 225 EAKLIFDQM----PQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVS-----WSAL 275
Query: 535 VDLLGRAGCLDEAKTL---IEAMPMQPDAVIWGSLLAAC 570
+ + G +EA + + A M+ D V+ S+L+AC
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSAC 314
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/607 (38%), Positives = 350/607 (57%), Gaps = 29/607 (4%)
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++ ++ FT N+++ K G +DD+ LF S +RD SWN+M+S F+Q DRFSEAL +
Sbjct: 225 RVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAF 284
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYG 197
F M E L + S L AC+ +G ++HA +L + + ++GSAL+DMY
Sbjct: 285 FRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYC 344
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLA 256
C +V RRVFD + R I WN++I+ Y +NG AL +F+ M+ +G+ P+ T+A
Sbjct: 345 NCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMA 404
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC AF IH ++ + D + NAL+DMY++ GK++ + +FD M +
Sbjct: 405 SVMPACVHCEAFSNKESIHGYAVKL-GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEV 463
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+ VS +M++GY + +A ++ +M + G G ++
Sbjct: 464 RDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKG------GPYK-- 515
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
P T +L CA LA + G++ H + +++ L SDI VG++L+DMY
Sbjct: 516 ------PNAITLMTVLPGCAALAAIAKGKEIHAYAIRNML------ASDITVGSALVDMY 563
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL----CGE-KPD 491
KCG + R+F M ++ ++WN +I+ C +G G EAL LFK M+ GE KP+
Sbjct: 564 AKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPN 623
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT I V ACSH+GL+ EG F M +HG+ P DHY C+VDLLGRAG L+EA L+
Sbjct: 624 EVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELV 683
Query: 552 EAMPMQPDAV-IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
MP + D V W SLL AC++H+N+ LGE AK LL +EP+ + YVLLSN+Y+ G W
Sbjct: 684 NTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLW 743
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+ + VRK MR+ GV K+PGCSWIE V+ FM D HP +++++ L+ L+ +M++
Sbjct: 744 NKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKE 803
Query: 671 GYVPNAS 677
GYVP+ S
Sbjct: 804 GYVPDTS 810
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/617 (27%), Positives = 282/617 (45%), Gaps = 110/617 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKV 76
D+ F +L + + + ++HA +K + +S + + N L+++Y KCG
Sbjct: 91 DNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGG------- 143
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
I D ++F + +RDQ SWNS ++ + +++ +AL
Sbjct: 144 ------------------------IGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQAL 179
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
F M EN LS ++ S AC+ ++G Q+H S + +AL+
Sbjct: 180 EAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGY-SLRVGDQKTFTNNALM 238
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY K GRV ++ +F+ +R++VSWN++I+ + Q+ S+AL F M+ G+E D V
Sbjct: 239 AMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGV 298
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ASV+ AC+ L G +IHA ++R L + +G+ALVDMY C ++ R VFD
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDH 358
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ R + +M+SGYA+ NG +E+AL LF
Sbjct: 359 ILGRRIELWNAMISGYAR-------------------------------NGLDEKALILF 387
Query: 374 -RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
++K + P T +++ AC + H + VK G + D +V N+L
Sbjct: 388 IEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK------EDRYVQNAL 441
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE---- 488
+DMY + G ++ IF++M RD VSWN MI G +G + AL L +M
Sbjct: 442 MDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDV 501
Query: 489 -------------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
KP+ +T++ VL C+ + +G++ + + + LA + +V
Sbjct: 502 KKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKE-IHAYAIRNMLASDITVGSALV 560
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D+ + GCL+ ++ + MP + + + W L+ AC +H ++ LE
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGK-------GEEALE------- 605
Query: 596 PYVLLSNMYAELGRWGE 612
L NM AE GR GE
Sbjct: 606 ---LFKNMVAEAGRGGE 619
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 230/469 (49%), Gaps = 57/469 (12%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
P R SW + + + F EA+ +++M ++F + L A +G D K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 172 QVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
Q+HA K Y SS V + + L++MYGKCG + +VFD + +R+ VSWNS I +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLA---AFKEGLQIHARLMRCEKLRND 287
ALE F M +E TL SV AC++L + G Q+H +R +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKT- 231
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
NAL+ MYAK G++++++ +F+ R++VS +M+S
Sbjct: 232 -FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMIS-------------------- 270
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
++Q+ EAL FRL+ E V T ++L AC++L L +G++
Sbjct: 271 -----------SFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H +V+++ + FVG++L+DMY C VE G R+F+ ++ R WNAMI G
Sbjct: 320 HAYVLRNNDLI-----ENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGY 374
Query: 468 AQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG--- 523
A+NG +AL LF +M+ + G P+ TM V+ AC H + FS+ HG
Sbjct: 375 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHC-------EAFSNKESIHGYAV 427
Query: 524 -LAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
L +D Y ++D+ R G +D ++T+ ++M ++ D V W +++
Sbjct: 428 KLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMITG 475
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 213/481 (44%), Gaps = 102/481 (21%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAKCGCLYGARK 75
LD A +L +C + + + +HA ++++ F+ + L+D+Y C + R+
Sbjct: 295 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 354
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFD + + + WN++I+G + G + A LF M + V+G +
Sbjct: 355 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK---------VAGLLPNTT---- 401
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ S + AC F +H K + D Y+ +AL+DM
Sbjct: 402 -----------------TMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDM 444
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM----------- 244
Y + G++ + +FD M R+ VSWN++IT Y +G S+AL + M
Sbjct: 445 YSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKD 504
Query: 245 ------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+P+ +TL +V+ CA+LAA +G +IHA +R L +D+ +G+ALVDMY
Sbjct: 505 DNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIR-NMLASDITVGSALVDMY 563
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AKCG LN +R VF+ MP +NV++WN LI
Sbjct: 564 AKCGCLNLSRRVFNEMP-------------------------------NKNVITWNVLIM 592
Query: 359 GYTQNGENEEALGLFRLLKRES-----VCPTHYTFGNLLNACANLADLQLG-----RQAH 408
+G+ EEAL LF+ + E+ P TF + AC++ + G R H
Sbjct: 593 ACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKH 652
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV-SWNAMIVG 466
H V+ SD + ++D+ + G +E+ + TM E D V +W++++
Sbjct: 653 DHGVE--------PTSDHYA--CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 702
Query: 467 C 467
C
Sbjct: 703 C 703
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/717 (34%), Positives = 373/717 (52%), Gaps = 115/717 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F + +C SV HA + F S +F+ N L+ +Y++CG
Sbjct: 126 DNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGS-------- 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ DA ++F MP D SWNS++ +A+ + AL
Sbjct: 178 -----------------------LSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KM +E F + + + L CA +G Q H S ++++G+ L+DMY
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM------------- 243
K G + A VF M +++VSWN+++ Y Q G DA+ +F +M
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 244 ----------------------MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
++SGI+P+EVTL SV+S CAS+ A G +IH ++
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 282 E-KLR-----NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
LR ++ ++ N L+DMYAKC K++ AR +FD + +
Sbjct: 395 PMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPK------------------ 436
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE--SVCPTHYTFGNLLN 393
ER+VV+W +I GY+Q+G+ +AL L + E P +T L
Sbjct: 437 -----------ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+LA L +G+Q H + +++ +FV N LIDMY KCG + D +F+ M+
Sbjct: 486 ACASLAALSIGKQIHAYALRN-----QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMM 540
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
E++ V+W +++ G +GYG EALG+F++M G K D VT++ VL ACSH+G++++G +
Sbjct: 541 EKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF+ M + G++P +HY C+VDLLGRAG L+ A LIE MPM+P V+W +LL+ C++H
Sbjct: 601 YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIH 660
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+ LGEY AKK+ E+ +N G Y LLSNMYA GRW +V R+R LMR +G+ K+PGCSW
Sbjct: 661 GKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSW 720
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
+E + F V DK HP KEIY VL + +K +GYVP DDE ++
Sbjct: 721 VEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 279/524 (53%), Gaps = 19/524 (3%)
Query: 66 KCGCLYGARKVFDKMSNKNVFTWN---SIITGLLKWGFIDDASRLFASMPERDQ--CSWN 120
KC + + + K+ + + T N +I+ + G + A L P D WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
S++ + + R ++ L F MHS ++ Y+F AC + G HAL +
Sbjct: 97 SLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVT 156
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ S+V++G+AL+ MY +CG +S AR+VFD M ++VSWNS+I Y + G ALE+F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 241 VRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
+M G PD++TL +V+ CAS+ G Q H + E ++N + +GN LVDMYA
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQN-MFVGNCLVDMYA 275
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNA 355
K G ++EA VF MP+++VVS +MV+GY++ + A +F +M E +VV+W+A
Sbjct: 276 KFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSA 335
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
I+GY Q G EALG+ R + + P T ++L+ CA++ L G++ H + +K+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 416 LRFL-SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGY 472
+ +G + V N LIDMY KC V+ +F+++ ERD V+W MI G +Q+G
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 473 GTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFS-SMSKEHGLAPLKD 529
+AL L +M C +P+ T+ L AC+ + G++ + ++ + PL
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFV 515
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
C++D+ + G + +A+ + + M M+ + V W SL+ +H
Sbjct: 516 S-NCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMH 557
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 252/701 (35%), Positives = 375/701 (53%), Gaps = 107/701 (15%)
Query: 48 SQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRL 107
S ++ + N L+ +Y+KC + AR VFD M GL
Sbjct: 78 SLLETDAVVANSLLTLYSKCSAVAAARSVFDGMP-----------VGL------------ 114
Query: 108 FASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF 167
RD SW +M S +++ +EAL F + E + ++ +A AC S F
Sbjct: 115 ------RDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELF 168
Query: 168 KM-GTQVHALLSK-SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ G V L+ K + +DV +G ALIDM+ K G + RRVFDG+ ER +V W LIT
Sbjct: 169 HLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLIT 228
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q+G + +A+E+F+ M+ +G +PD+ TL+S++SAC L +F+ G Q+H+ +R L
Sbjct: 229 RYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRL-GLE 287
Query: 286 NDLVLGNALVDMYAKCGK---LNEARCVFDRMPIRNVVSETSMVSGYA-KASSVKSARLM 341
+D + LVDMYAK L+ AR VF+RMP NV++ T+++SGY + S ++
Sbjct: 288 SDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMIL 347
Query: 342 FTKMLERNV---------------------------------------VSWNALIAGYTQ 362
F KML + V NAL++ Y +
Sbjct: 348 FCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAE 407
Query: 363 NGENEEALGLFRLL--------------------------KRESVCPTHYTFGNLLNACA 396
+G EEA F L +R + + +TFG+L++A A
Sbjct: 408 SGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAA 467
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
++ L G++ H L +G SD +GNSL+ MY +CG + D C++F+ M + +
Sbjct: 468 SVGMLTKGQRLH------ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHN 521
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+SW +MI G A++GY AL LF M+ G KP+ VT I VL ACSHAGLV+EG+++F
Sbjct: 522 VISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFR 581
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M K HGL P +HY CMVDLLGR+G +++A I MP Q DA++W +LL ACK H N+
Sbjct: 582 MMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNM 641
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
+GE A ++++EP + PYVLLSN+YAE G W +V R+R LMR + ++K+ G SW+ +
Sbjct: 642 DIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHV 701
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++ F D HP +EIY L+ L RE+K +GYVP+ S
Sbjct: 702 DNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTS 742
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 172/368 (46%), Gaps = 71/368 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + +L +C S +++H+ ++ S+ + L+D+YAK L+ AR
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR 313
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDD---------------------ASRLFASMPE 113
+VF++M NV W ++++G ++ G D+ +S L A
Sbjct: 314 EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373
Query: 114 RDQCS-------------------WNSMVSGFAQHDRFSEALGYFVKMHSEN-------- 146
DQ S N++VS +A+ EA F +++ +N
Sbjct: 374 GDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNL 433
Query: 147 ------------------FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+S ++FGS +SA A G ++HAL K+ + SD +
Sbjct: 434 DGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAI 493
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G++L+ MY +CG + A +VFD M + N++SW S+I+ ++G A+ ALE+F M+A+G+
Sbjct: 494 GNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGV 553
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLM-RCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+P++VT +V+SAC+ KEG + H R+M + L + +VD+ + G + +A
Sbjct: 554 KPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDA 612
Query: 308 RCVFDRMP 315
+ MP
Sbjct: 613 LDFINEMP 620
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 236/660 (35%), Positives = 366/660 (55%), Gaps = 48/660 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK-CGCLYGARKV 76
D S FA +L + + + + ++K+ F S++ I +++VY + L A K
Sbjct: 222 DQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKF 281
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M +N +TW+++I L G ID A ++ P + S ++++G A+ R +EA
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEAR 341
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F ++ V +A+I Y
Sbjct: 342 ILFEQIPD---------------------------------------PIVVSWNAMITGY 362
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ G V A+ +FD M RN +SW +I Y QNG + +AL++ + +G+ P +L
Sbjct: 363 MQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLT 422
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S AC+ + A + G Q+H+ ++ N V NAL+ MY KC + R VF+RM +
Sbjct: 423 SSFLACSHIGALETGRQVHSLAVKAGCQFNSYVC-NALISMYGKCRNMEYVRQVFNRMRV 481
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ VS S ++ + + ++ AR +F ML R+VVSW +I+ Y Q +EA+ F+ +
Sbjct: 482 KDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTM 541
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
E P LL+ C L +LG+Q HT +KHG+ +S++ V N+L+ MY
Sbjct: 542 LHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGM------DSELIVANALMSMY 595
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG D ++F++M ERD +WN I GCAQ+G G EA+ +++ M G P+ VT +
Sbjct: 596 FKCGCA-DSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFV 654
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L ACSHAGLV+EG ++F SMS+++GL PL +HY CMVDLLGR G + A+ I MP+
Sbjct: 655 GLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPI 714
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD VIW +LL ACK+H+N +G A+KL EPSN+G YV+LSN+Y+ LG W EV +
Sbjct: 715 EPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAEL 774
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RK+M++RGV K+PGCSW++I V+ F+ DK+H +EI L+ L ++ GYVP+
Sbjct: 775 RKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDT 834
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/581 (28%), Positives = 274/581 (47%), Gaps = 85/581 (14%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL R V D RRV + + + N ++ Y + G + AR++FD M +++
Sbjct: 101 LLSGYARLGRVLDARRVFDGMPERNTVA----WNAMVSCYVQNGDITMARRLFDAMPSRD 156
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WNS++TG + DA LF MP+R+ +W M+SG+ + ++ + F MH
Sbjct: 157 VTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHH 216
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK-CGRVS 203
E + + +F S LSA G D + + L+ K+ + SDV +G++++++Y + +
Sbjct: 217 EGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALD 276
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A + FDGM ERN +W+++I G A+ V+ G +P V +
Sbjct: 277 IAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY------GRDP--------VKSIP 322
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S A GL A+CG++ EAR +F+++P VVS
Sbjct: 323 SQTALLTGL--------------------------ARCGRITEARILFEQIPDPIVVSWN 356
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M++GY + V A+ +F +M RN +SW +IAGY QNG +EEAL L + L R + P
Sbjct: 357 AMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLP 416
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS-- 441
+ + + AC+++ L+ GRQ H+ VK G +F S +V N+LI MY KC +
Sbjct: 417 SLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNS------YVCNALISMYGKCRNME 470
Query: 442 -----------------------------VEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ED IF+ M+ RD VSW +I AQ
Sbjct: 471 YVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAER 530
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G EA+ FK ML EKP+ + +L C G + G++ +++ +HG+
Sbjct: 531 GDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQ-IHTVAIKHGMDSELIVAN 589
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + + GC D K + ++M + D W + + C H
Sbjct: 590 ALMSMYFKCGCADSHK-VFDSME-ERDIFTWNTFITGCAQH 628
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 193/479 (40%), Gaps = 127/479 (26%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I L + G + +A +F +MP RD +WNSM+S + +A F
Sbjct: 40 IRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF------------ 87
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
A +G +V + L+ Y + GRV ARRVFDG
Sbjct: 88 -------DAISGG--------------------NVRTATILLSGYARLGRVLDARRVFDG 120
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN V+WN++++CY QNG + A +F M +
Sbjct: 121 MPERNTVAWNAMVSCYVQNGDITMARRLFDAMPS-------------------------- 154
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
D+ N++V Y ++ +A +F +MP RN+V+ T M+SGY +
Sbjct: 155 --------------RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVR 200
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+E++ W+ +FR++ E P F ++
Sbjct: 201 --------------IEQHGKGWD-----------------IFRMMHHEGASPDQSNFASV 229
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED-GCRIFE 450
L+A L DL + V+K G ESD+ +G S++++Y + S D + F+
Sbjct: 230 LSAVTGLQDLGVLEVLRPLVLKTGF------ESDVVIGTSILNVYTRDASALDIAIKFFD 283
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
MVER+ +W+ MI + G A+ ++ + + P ++ L C G + E
Sbjct: 284 GMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPV-KSIPSQTALLTGLARC---GRITE 339
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R F + P+ + M+ + G +DEAK L + MP + + + W ++A
Sbjct: 340 ARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-NTISWAGMIAG 392
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 158/391 (40%), Gaps = 84/391 (21%)
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
A+ G+L EAR VFD MP R++++ SM+S Y + ++ AR++F + NV + L++
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLS 103
Query: 359 GYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
GY + G +A +F + +R +V + +++ D+ + R+
Sbjct: 104 GYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGDITMARRL---------- 148
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
F + D+ NS++ Y + D +F+ M +R+ V+W MI G + +
Sbjct: 149 FDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGW 208
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACS---------------------------------- 503
+F+ M G PD VL A +
Sbjct: 209 DIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVY 268
Query: 504 -------------HAGLVEEGRKYFSSMSKE-------------HGLAPLKD--HYTCMV 535
G+VE +S+M +G P+K T ++
Sbjct: 269 TRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALL 328
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SNS 594
L R G + EA+ L E +P P V W +++ +N M+ E AK+L + P N+
Sbjct: 329 TGLARCGRITEARILFEQIP-DPIVVSWNAMITG--YMQNGMVDE--AKELFDRMPFRNT 383
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
+ + YA+ GR E + + + + + G+
Sbjct: 384 ISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 363/641 (56%), Gaps = 42/641 (6%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID--VYAKCGCLYGARKV 76
++P +++SC ++ +++ AR+ + + F +R+I A G L+ A +
Sbjct: 157 TNPTLLIMESC---STMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTI 213
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+++ N F WN +M+ G+ + A
Sbjct: 214 FNRVEQPNTFMWN-------------------------------TMIRGYQNARKPIFAF 242
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+FV M + SF AL AC G V+ ++ K + ++ + + LI Y
Sbjct: 243 SFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFY 302
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ G + AR+VFD ++++V+W ++I Y + + +A+EVF M+ S +EP+EVTL
Sbjct: 303 AERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLI 362
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+VVSAC+ + + G ++H ++ + +R L L NAL+DMY KC L +AR +FDRM
Sbjct: 363 AVVSACSDMGNLEMGKRVHEKVEE-KNMRCSLSLHNALLDMYVKCDCLVDARELFDRMAT 421
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++V S TSMV+GYAK ++SAR F + +N V W+A+IAGY+QN + +E+L LF +
Sbjct: 422 KDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEM 481
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
V P +T ++L+AC L L LG H + V + LS + + N+++DMY
Sbjct: 482 MERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLS-----VTLENAIVDMY 536
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS++ +F TM ER+ +SWN MI G A NG +A+ +F +M G +P+++T +
Sbjct: 537 AKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFV 596
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH GL+ EGR+YF +M +++G+ P + HY CMVDLLGR G L+EA LI MPM
Sbjct: 597 SLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPM 656
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QP WG+LL AC++H N+ L A LL ++P +SG YVLL+N A +W +V RV
Sbjct: 657 QPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRV 716
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
R LM+ +GV K PG S IEI G F+V D+ HP ++EIY
Sbjct: 717 RSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIY 757
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 220/488 (45%), Gaps = 101/488 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS F L +C + ++V + V+ + K F E+ ++N LI YA+ G L AR+V
Sbjct: 255 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 314
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ S+K+V TW +M+ G+A HD EA+
Sbjct: 315 FDESSDKDVVTW-------------------------------TTMIDGYAAHDCSEEAM 343
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-------------- 182
F M + +E + + +SAC+ + +MG +VH + +
Sbjct: 344 EVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMY 403
Query: 183 -----------------SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ DVY +++++ Y KCG + ARR FD +N V W+++I
Sbjct: 404 VKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIA 463
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y QN ++L++F MM G+ P E TL SV+SAC L G IH + + +
Sbjct: 464 GYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIP 523
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ L NA+VDMYAKCG ++ A VF MP RN++S +M++GYA
Sbjct: 524 LSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAA-------------- 569
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
NG ++A+ +F ++ P + TF +LL AC++ + GR
Sbjct: 570 -----------------NGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGR 612
Query: 406 QAHTHVV-KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
+ ++ K+G++ G + ++D+ + G +E+ ++ M ++ +W A+
Sbjct: 613 EYFDNMERKYGIKPERGHYA------CMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGAL 666
Query: 464 IVGCAQNG 471
+ C +G
Sbjct: 667 LNACRMHG 674
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/654 (36%), Positives = 376/654 (57%), Gaps = 38/654 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + + + +HA +KS AS ++ N +++Y+KCGCL AR FD
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTE 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
NVF++N I+ K I A +LF P+ D S+N+++SG+A A+ F +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + ++ ++AC VD + Q+H + S + +A + Y K G
Sbjct: 131 MRELGFEVDGFTLSGLIAACCDRVD--LIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A VF GM R+ VSWNS+I Y Q+ + AL ++ M+ G + D TLASV++
Sbjct: 189 LREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A SL G Q H +L++ +N V G+ L+D Y+KCG R+ +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGG-------------RDGM 294
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN-EEALGLFRLLKRE 379
S++ V F ++L ++V WN +I+GY+ N E+ EEA+ FR ++R
Sbjct: 295 SDSEKV---------------FQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRI 339
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P +F + +AC+NL+ G+Q H +K + + I V N+LI +Y K
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNI-----PSNRISVNNALISLYYKS 394
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ D R+F+ M E + VS+N MI G AQ+G+GTEAL L+++ML G P+++T + +L
Sbjct: 395 GNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAIL 454
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G V+EG+KYF++M + + P +HY+CM+DLLGRAG L+EA+ I+AMP +P
Sbjct: 455 SACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+V W +LL AC+ H+N+ L E AK+L+ ++P + PYV+L+NMYA+ G+W E+ VRK
Sbjct: 515 SVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKS 574
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
MR + + K+PGCSWIE+ +VF+ +D HP+ +E+ L+ + ++MK+VGYV
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 212/495 (42%), Gaps = 95/495 (19%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
SF L D G +HAL KS +S Y+ + +++Y KCG +S AR FD
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 213 RERNIVSWNSLITCYEQN------------GPASD-------------------ALEVFV 241
E N+ S+N ++ Y ++ P D A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
RM G E D TL+ +++AC + L A + + + NA V Y+K
Sbjct: 130 RMRELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSS---VNNAFVTYYSKG 186
Query: 302 GKLNEARCVFDRMP-IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G L EA VF M +R+ VS WN++I Y
Sbjct: 187 GLLREAVSVFYGMDGLRDEVS-------------------------------WNSMIVAY 215
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
Q+ E +AL L++ + + +T ++LNA +L L GRQ H ++K G
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF---- 271
Query: 421 GEESDIFVGNSLIDMYMKCG---SVEDGCRIFETMVERDWVSWNAMIVGCAQN-GYGTEA 476
+ VG+ LID Y KCG + D ++F+ ++ D V WN MI G + N + EA
Sbjct: 272 --HQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEA 329
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY----- 531
+ F++M G +PD + + V ACS+ +G++ HGLA +K +
Sbjct: 330 VKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQI-------HGLA-IKSNIPSNRI 381
Query: 532 ---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
++ L ++G L +A+ + + MP + +AV + ++ H + + +++L+
Sbjct: 382 SVNNALISLYYKSGNLLDARRVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALRLYQRMLD 440
Query: 589 --IEPSNSGPYVLLS 601
I P+N +LS
Sbjct: 441 SGIAPNNITFVAILS 455
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 36/306 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG---A 73
+D A +L++ + R+ H ++IK+ F + + LID Y+KCG G +
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDS 297
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
KVF ++ + ++ W N+M+SG++ ++ S
Sbjct: 298 EKVFQEILSPDLVLW-------------------------------NTMISGYSMNEEHS 326
Query: 134 -EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSA 191
EA+ F +M + SF SAC+ G Q+H L KS S+ + + +A
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNA 386
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LI +Y K G + ARRVFD M E N VS+N +I Y Q+G ++AL ++ RM+ SGI P+
Sbjct: 387 LISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPN 446
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+T +++SACA EG + + K+ + + ++D+ + GKL EA
Sbjct: 447 NITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 312 DRMPIR 317
D MP +
Sbjct: 507 DAMPYK 512
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 369/679 (54%), Gaps = 80/679 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++ ++ +L C SKS++D ++VH+ I + A + + +L+ +YA CG L R+V
Sbjct: 97 LETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRV 156
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFI--------------------DDASRLFASMPERDQ 116
FD M KNV+ WN +++ K G + AS LF + +RD
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SWNSM+SG+ + L + +M + + S L CA S +G VH+L
Sbjct: 217 ISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
KS + + + L+DMY KCG + A RVF+ M ERN+VSW S+I Y ++G + A
Sbjct: 277 AIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+ + +M G++ D V S++ ACA + G +H ++ + ++L + NAL+D
Sbjct: 337 IRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVH-DYIKANNMESNLFVCNALMD 395
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY KCG ++ A VF + M+ ++++SWN +
Sbjct: 396 MYTKCGSMDGANSVF-------------------------------STMVVKDIISWNTM 424
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I GE LK P T +L ACA+L+ L+ G++ H +++++G
Sbjct: 425 I------GE----------LK-----PDSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
SD V N+L+D+Y+KCG + +F+ + +D VSW MI G +GYG EA
Sbjct: 464 ------SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ F +M G +PD V+ I +L ACSH+GL+E+G ++F M + + P +HY CMVD
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LL R G L +A IE +P+ PDA IWG+LL C+++ +I L E VA+++ E+EP N+G
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGY 637
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV-KDKRHPLNKE 655
YVLL+N+YAE +W EV R+R+ + K+G+ K PGCSWIEI G VN+F+ + HP +K+
Sbjct: 638 YVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKK 697
Query: 656 IYLVLKMLTREMKRVGYVP 674
I +LK + R+MK GY P
Sbjct: 698 IESLLKKMRRKMKEEGYFP 716
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 206/434 (47%), Gaps = 53/434 (12%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA-RRVFDGMRERNIVSWNSLITCYE 228
G +H SK+ + S ++ I R+S R D R + +N+ I +
Sbjct: 29 GCFIHKPTSKATFFSPIFSSCLPI-------RISATPTRTID----RQVTDYNAKILHFC 77
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q G +A+E+ S +E T +SV+ CA + +G ++H+ +++ + D
Sbjct: 78 QLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGKKVHS-IIKSNNVAVDE 134
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK------------ 336
VLG LV +YA CG L E R VFD M +NV MVS YAK K
Sbjct: 135 VLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK 194
Query: 337 --------SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
SA +F K+ +R+V+SWN++I+GY NG E L +++ + + T
Sbjct: 195 GIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATI 254
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L CAN L LG+ H+ +K S E I N+L+DMY KCG ++ R+
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIK------STFERRINFSNTLLDMYSKCGDLDGALRV 308
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
FE M ER+ VSW +MI G ++G A+ L ++M G K D V +L AC+ +G +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSL 368
Query: 509 EEGR---KYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
+ G+ Y + + E L + C ++D+ + G +D A ++ M ++ D + W
Sbjct: 369 DNGKDVHDYIKANNMESNL------FVCNALMDMYTKCGSMDGANSVFSTMVVK-DIISW 421
Query: 564 GSLLAACKVHRNIM 577
+++ K M
Sbjct: 422 NTMIGELKPDSRTM 435
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 50/251 (19%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R ++Q+ + LD +L +C RS S+ + + VH I + S +F+ N L+D+Y
Sbjct: 338 RLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGL----------------------------- 95
KCG + GA VF M K++ +WN++I L
Sbjct: 398 TKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 96 --------------------LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+K G + A LF +P +D SW M+SG+ H +EA
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALID 194
+ F +M E SF S L AC+ S + G + ++ + + ++D
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 195 MYGKCGRVSCA 205
+ + G +S A
Sbjct: 578 LLSRTGNLSKA 588
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/671 (34%), Positives = 358/671 (53%), Gaps = 69/671 (10%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
+ +H II++ E F+ N ++ YA AR+VFD++ N+F+WN+++ K
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL-GYFVKMHSENFALSEYSFGS 156
G I + F +P+RD +WN ++ G++ A+ Y M + L+ + +
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L + + +G Q+H + K + S + +GS L+ MY G +S A++VF G+ +RN
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 217 IV------------------------------SWNSLITCYEQNGPASDALEVFVRMMAS 246
V SW ++I QNG A +A+E F M
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++ D+ SV+ AC L A EG QIHA ++R ++ + +G+AL+DMY KC L+
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDHIYVGSALIDMYCKCKCLHY 323
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A+ VFD +M ++NVVSW A++ GY Q G
Sbjct: 324 AKTVFD-------------------------------RMKQKNVVSWTAMVVGYGQTGRA 352
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EEA+ +F ++R + P HYT G ++ACAN++ L+ G Q H + GL +
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY------V 406
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V NSL+ +Y KCG ++D R+F M RD VSW AM+ AQ G E + LF KM+
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G KPD VT+ GV+ ACS AGLVE+G++YF M+ E+G+ P HY+CM+DL R+G L+E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A I MP PDA+ W +LL+AC+ N+ +G++ A+ L+E++P + Y LLS++YA
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 586
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
G+W V ++R+ MR++ V K+PG SWI+ G ++ F D+ P +IY L+ L +
Sbjct: 587 KGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNK 646
Query: 667 MKRVGYVPNAS 677
+ GY P+ S
Sbjct: 647 IIDNGYKPDTS 657
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 233/416 (56%), Gaps = 39/416 (9%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
VS +++H ++IK F S + + + L+ +YA GC+ A+KVF + ++N +NS++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
LL G I+DA +LF M E+D SW +M+ G AQ+ EA+ F +M + + +Y F
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
GS L AC G G Q+HA + ++ + +Y+GSALIDMY KC + A+ VFD M++
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+N+VSW +++ Y Q G A +A+++F+ M SGI+PD TL +SACA++++ +EG Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H + + L + + + N+LV +Y KCG ++++ +F+ M +R+ VS T+MVS YA+
Sbjct: 394 HGKAI-TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 335 VKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPT--HYT 387
+F KM++ + V+ +I+ ++ G E+ F+L+ E + P+ HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 388 ------------------------------FGNLLNACANLADLQLGRQAHTHVVK 413
+ LL+AC N +L++G+ A +++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 186/370 (50%), Gaps = 37/370 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D PF +L +C ++++ +++HA II++ F I++ + LID+Y KC CL+ A+ V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M KNV +W +++ G+ Q R EA+
Sbjct: 328 FDRMKQKNVVSWTAMVV-------------------------------GYGQTGRAEEAV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+ M Y+ G A+SACA + G+Q H S V + ++L+ +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + + R+F+ M R+ VSW ++++ Y Q G A + +++F +M+ G++PD VTL
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 257 SVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ ++G Q + +LM E + + + ++D++++ G+L EA + MP
Sbjct: 477 GVISACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 316 I-RNVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALG 371
+ + T+++S +++ + ++E + + L + Y G+ +
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 372 LFRLLKRESV 381
L R ++ ++V
Sbjct: 596 LRRGMREKNV 605
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 368/662 (55%), Gaps = 52/662 (7%)
Query: 18 DSSPFAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK-CGCLYGAR 74
D S FA L + L + V ++ RV A +K+ F ++ I +++VY++ L A
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLA--LKTGFERDVVIGTAILNVYSRDTSVLDTAI 280
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K F+ M +N +TW+++I L G ID A ++ P + ++++G AQ R +
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD 340
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A F ++ E +S +ALI
Sbjct: 341 ARILFEQI-PEPIVVS--------------------------------------WNALIT 361
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G V+ A+ +FD M RN +SW +I Y QNG + +AL + + SG+ P +
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L S+ AC+++ A + G Q+H+ ++ N NAL+ MY KC + AR VF RM
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRM 480
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+++VS S ++ + + AR F ML R+ VSW +I+ Y ++ EA+G F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ E P LL C +L ++G+Q HT +K G+ +S++ V N+LI
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGM------DSELIVANALIS 594
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG D RIF+ M ERD +WN +I G AQ+G G EA+ +++ M G P+ VT
Sbjct: 595 MYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+G+L ACSHAGLV+EG K+F SMS+++GL PL +HY CMVDLLGR G + A+ I M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P++PD VIW +LL ACK+H+N +G+ A+KL IEPSN+G YV+LSN+Y+ LG WGEV
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VRK+M+++GV+K+PGCSW +I ++ F+ DK+H +EI L+ L +K GYVP
Sbjct: 774 EVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVP 833
Query: 675 NA 676
+
Sbjct: 834 DT 835
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 257/527 (48%), Gaps = 59/527 (11%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A LL R V + RRV +++ + N +I Y + G + AR++FD M +
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVA----WNAMISCYVQNGDITMARRLFDAMPS 155
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V +WNS++TG + DA LF MPER+ SW M+SG+ + + +A F KM
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
H E + +F SALSA G + + + L K+ + DV +G+A++++Y + V
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 203 -SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
A + F+ M ERN +W+++I G A+ V+ R I A
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI------------A 323
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C + AL+ A+CG++++AR +F+++P VVS
Sbjct: 324 CRT----------------------------ALITGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++++GY + V A+ +F KM RN +SW +IAGY QNG +EEALGL + L R +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P+ + ++ AC+N+ L+ G Q H+ VK G +F S F N+LI MY KC +
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNS------FACNALITMYGKCRN 469
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E ++F MV +D VSWN+ + QN EA F ML D V+ ++ A
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISA 525
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
+HA E F +M EH L + + LLG G L +K
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELP----NSPILTILLGVCGSLGASK 568
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 192/386 (49%), Gaps = 36/386 (9%)
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
SA I G+ GRV AR VFD M R+I++WNS+I+ Y NG A +++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY--------- 88
Query: 250 PDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
D ++ ++ + L+ + + G + AR + L + V NA++ Y + G + AR
Sbjct: 89 -DAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMAR 147
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD MP R+V S SM++GY + + AR +F KM ERN+VSW +I+GY + + +
Sbjct: 148 RLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK 207
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A +F + RE + P F + L+A L +L + +K G E D+ +
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGF------ERDVVI 261
Query: 429 GNSLIDMYMKCGSVED-GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
G +++++Y + SV D + FE+M+ER+ +W+ MI + G A+ ++++
Sbjct: 262 GTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER----- 316
Query: 488 EKPDHVTMI----GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
D V I ++ + G +++ R F + + P+ + ++ + G
Sbjct: 317 ---DPVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGM 368
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAA 569
++EAK L + MP + + + W ++A
Sbjct: 369 VNEAKELFDKMPFR-NTISWAGMIAG 393
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 368/662 (55%), Gaps = 52/662 (7%)
Query: 18 DSSPFAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK-CGCLYGAR 74
D S FA L + L + V ++ RV A +K+ F ++ I +++VY++ L A
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLA--LKTGFERDVVIGTAILNVYSRDTSVLDTAI 280
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K F+ M +N +TW+++I L G ID A ++ P + ++++G AQ R +
Sbjct: 281 KFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD 340
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A F ++ E +S +ALI
Sbjct: 341 ARILFEQI-PEPIVVS--------------------------------------WNALIT 361
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y + G V+ A+ +FD M RN +SW +I Y QNG + +AL + + SG+ P +
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L S+ AC+++ A + G Q+H+ ++ N NAL+ MY KC + AR VF RM
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFAC-NALITMYGKCRNMEYARQVFSRM 480
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+++VS S ++ + + AR F ML R+ VSW +I+ Y ++ EA+G F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ E P LL C +L ++G+Q HT +K G+ +S++ V N+LI
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGM------DSELIVANALIS 594
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG D RIF+ M ERD +WN +I G AQ+G G EA+ +++ M G P+ VT
Sbjct: 595 MYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+G+L ACSHAGLV+EG K+F SMS+++GL PL +HY CMVDLLGR G + A+ I M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P++PD VIW +LL ACK+H+N +G+ A+KL IEPSN+G YV+LSN+Y+ LG WGEV
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VRK+M+++GV+K+PGCSW +I ++ F+ DK+H +EI L+ L +K GYVP
Sbjct: 774 EVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVP 833
Query: 675 NA 676
+
Sbjct: 834 DT 835
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 257/527 (48%), Gaps = 59/527 (11%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A LL R V + RRV +++ + N +I Y + G + AR++FD M +
Sbjct: 100 AILLSGYGRLGRVLEARRVFDGMLERNTVA----WNAMISCYVQNGDITMARRLFDAMPS 155
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V +WNS++TG + DA LF MPER+ SW M+SG+ + + +A F KM
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
H E + +F SALSA G + + + L K+ + DV +G+A++++Y + V
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 203 -SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
A + F+ M ERN +W+++I G A+ V+ R I A
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI------------A 323
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C + AL+ A+CG++++AR +F+++P VVS
Sbjct: 324 CRT----------------------------ALITGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++++GY + V A+ +F KM RN +SW +IAGY QNG +EEALGL + L R +
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGM 415
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P+ + ++ AC+N+ L+ G Q H+ VK G +F S F N+LI MY KC +
Sbjct: 416 LPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNS------FACNALITMYGKCRN 469
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E ++F MV +D VSWN+ + QN EA F ML D V+ ++ A
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML----SRDDVSWTTIISA 525
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
+HA E F +M EH L + + LLG G L +K
Sbjct: 526 YAHAEQSNEAMGAFKTMFCEHELP----NSPILTILLGVCGSLGASK 568
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 192/386 (49%), Gaps = 36/386 (9%)
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
SA I G+ GRV AR VFD M R+I++WNS+I+ Y NG A +++
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY--------- 88
Query: 250 PDEVTLASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
D ++ ++ + L+ + + G + AR + L + V NA++ Y + G + AR
Sbjct: 89 -DAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMAR 147
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD MP R+V S SM++GY + + AR +F KM ERN+VSW +I+GY + + +
Sbjct: 148 RLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGK 207
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A +F + RE + P F + L+A L +L + +K G E D+ +
Sbjct: 208 AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGF------ERDVVI 261
Query: 429 GNSLIDMYMKCGSVED-GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
G +++++Y + SV D + FE+M+ER+ +W+ MI + G A+ ++++
Sbjct: 262 GTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER----- 316
Query: 488 EKPDHVTMI----GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
D V I ++ + G +++ R F + + P+ + ++ + G
Sbjct: 317 ---DPVKSIACRTALITGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGM 368
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAA 569
++EAK L + MP + + + W ++A
Sbjct: 369 VNEAKELFDKMPFR-NTISWAGMIAG 393
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 358/648 (55%), Gaps = 40/648 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M ++ V ++ +++ L+K G + +A L+
Sbjct: 146 AASPFAYDFMVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQ 205
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + + +SGF +++ ALG F KM S + + + AC G+ +F +
Sbjct: 206 CPSGSVAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLA 265
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ L KS + DV +AL+D+Y +
Sbjct: 266 LSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 325
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +LI +EQ G A++A++++ +M+A G P+ +SV
Sbjct: 326 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 385
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACASL + G +IHAR ++ N V +L+DMY KC K +A+ +FD +P +N
Sbjct: 386 LSACASLEDLRGGARIHARSLKMGSSTNVFV-SCSLIDMYCKCNKCGDAQTIFDTLPQKN 444
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S+VSGY+ + A +F KM RN+ SWN +I+GY QN + +AL F +
Sbjct: 445 IVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLA 504
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACANL L G+ AH +K G+ E IF+G +L DMY K
Sbjct: 505 SGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGI------EESIFIGTALSDMYAK 558
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M ER+ V+W AMI G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 559 SGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLAL 618
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF M + G++P + HYTCMVD+L RAG L EA+ L+ P +
Sbjct: 619 LFACSHGGLVEQAIHYFDKM-QALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKS 677
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC +RN + E AK+L E+ N+ YVLLSNMYA GRW + R+R
Sbjct: 678 EANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRV 737
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
LM+ + K GCSW+++ G + F + +HPL+ EI +L +L E
Sbjct: 738 LMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSMEIDEILDLLMWE 785
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 228/464 (49%), Gaps = 62/464 (13%)
Query: 46 IKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
IKS F S I +QN LI +Y + G ARKVFD+M K+V +W +++ + G +D A
Sbjct: 273 IKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGA 332
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
R+ +MPER++ SW ++++ Q +EA+ + +M ++ + F S LSACA
Sbjct: 333 RRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASL 392
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
D + G ++HA K S++V++ +LIDMY KC + A+ +FD + ++NIV WNSL+
Sbjct: 393 EDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLV 452
Query: 225 TCYEQNG------------PAS-------------------DALEVFVRMMASGIEPDEV 253
+ Y NG PA DAL+ F M+ASG P E+
Sbjct: 453 SGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEI 512
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +SV+ ACA+L + G HA+ ++ + + +G AL DMYAK G L ++ +F +
Sbjct: 513 TFSSVLLACANLCSLVTGKMAHAKTIKL-GIEESIFIGTALSDMYAKSGDLQSSKRMFYQ 571
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV----SWNALIAGYTQNGENEEA 369
MP RN V+ T+M+ G A+ + + L+F M+ + ++ AL+ + G E+A
Sbjct: 572 MPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQA 631
Query: 370 LGLFRLLKRESVCP--THYT--------FGNLLNACANLADLQLGRQAHT---------- 409
+ F ++ + P HYT G L A A L +A++
Sbjct: 632 IHYFDKMQALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNT 691
Query: 410 ----HVVKHGLRFLSGEESDIFVGNSLI-DMYMKCGSVEDGCRI 448
+ + + L D G L+ +MY CG +D RI
Sbjct: 692 YRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARI 735
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 167/310 (53%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R+HAR +K ++ +F+ LID+Y KC
Sbjct: 369 QMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCN 428
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
A+ +FD + KN+ WNS+++G G + +A LF MP R+ SWN+++SG+AQ
Sbjct: 429 KCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 488
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + E +F S L ACA G HA K +++
Sbjct: 489 NRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFI 548
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++R+F M ERN V+W ++I +NG A +++ +F MMA+G+
Sbjct: 549 GTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGM 608
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P+E T +++ AC+ ++ + + M+ + +VD+ A+ G+L EA
Sbjct: 609 TPNEHTFLALLFACSHGGLVEQAIHYFDK-MQALGISPKEKHYTCMVDVLARAGRLAEAE 667
Query: 309 CVFDRMPIRN 318
+ + P ++
Sbjct: 668 ALLMKTPSKS 677
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 356/660 (53%), Gaps = 71/660 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ ++++C S+ + R+VH ++++ +
Sbjct: 208 FSCVVNACTGSRDLEAGRQVHGAVVRTGY------------------------------- 236
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+VFT N+++ K G I+ A+ +F MP D SWN+ +SG H AL ++
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQ 296
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S + ++ S L ACAG+ F +G Q+H + K+ D ++ L+DMY K G
Sbjct: 297 MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGF 356
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD--EVTLASVV 259
+ AR+VFD M R+++ WN+LI+ +G + L +F RM G++ D TLASV+
Sbjct: 357 LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ AS A Q+HA + L + V+ N L+D Y KCG+L+ A VF ++
Sbjct: 417 KSTASSEAICHTRQVHALAEKIGLLSDSHVI-NGLIDSYWKCGQLDYAIKVFKESRSDDI 475
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+S T+M++ +Q E+A+ LF + R+
Sbjct: 476 ISSTTMMTAL-------------------------------SQCDHGEDAIKLFVQMLRK 504
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNAC +L+ + G+Q H H++K SD+F GN+L+ Y KC
Sbjct: 505 GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF------TSDVFAGNALVYAYAKC 558
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F + ER VSW+AMI G AQ+G+G AL LF +ML G P+H+T+ VL
Sbjct: 559 GSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVL 618
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAGLV++ +KYF SM + G+ ++HY CM+D+LGRAG L++A L+ MP Q +
Sbjct: 619 SACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQAN 678
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL A +VHR+ LG A+KL +EP SG +VLL+N YA G W E+ +VRKL
Sbjct: 679 AAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKL 738
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ V K+P SW+EI V+ F+V DK HP+ ++IY L L M + GYVPN D
Sbjct: 739 MKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVD 798
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 248/496 (50%), Gaps = 46/496 (9%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFSEALGYF 139
+VF N+++ +G +D+A R+F ER+ SWN+M+S + ++D+ +A+G F
Sbjct: 134 DVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M +E+ F ++AC GS D + G QVH + ++ Y DV+ +AL+DMY K
Sbjct: 194 REMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL 253
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + A VF+ M ++VSWN+ I+ +G ALE+ ++M +SG+ P+ TL+SV+
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVL 313
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA AF G QIH +++ ++ V LVDMYAK G L++AR VFD MP
Sbjct: 314 KACAGAGAFNLGRQIHGFMVKAVADFDEFV-AVGLVDMYAKHGFLDDARKVFDFMP---- 368
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
R+++ WNALI+G + +G + E L LF +++E
Sbjct: 369 ---------------------------RRDLILWNALISGCSHDGRHGEVLSLFHRMRKE 401
Query: 380 --SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ T ++L + A+ + RQ H K GL SD V N LID Y
Sbjct: 402 GLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLL------SDSHVINGLIDSYW 455
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ ++F+ D +S M+ +Q +G +A+ LF +ML G +PD +
Sbjct: 456 KCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSS 515
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+ E+G++ + + K + + +V + G +++A +P +
Sbjct: 516 LLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG-NALVYAYAKCGSIEDADMAFSGLP-E 573
Query: 558 PDAVIWGSLLAACKVH 573
V W +++ H
Sbjct: 574 RGIVSWSAMIGGLAQH 589
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 184/647 (28%), Positives = 279/647 (43%), Gaps = 119/647 (18%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSI 91
S+S+ +H+ ++KS + N L+ +Y++C AR VFD++ + +W+S+
Sbjct: 17 SRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSL 74
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
+T G MP +AL F M +E
Sbjct: 75 VTAYSNNG-----------MPR--------------------DALLAFRAMRGRGVPCNE 103
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
++ L CA V F G QVHAL +R DV++ +AL+ +YG G V ARR+FD
Sbjct: 104 FALPVVLK-CAPDVRF--GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDE 160
Query: 212 M----RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
ERN VSWN++I+ Y +N + DA+ VF M+ SG P+E + VV+AC
Sbjct: 161 YVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRD 220
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+ G Q+H ++R D+ NALVDMY+K G + A VF++MP +
Sbjct: 221 LEAGRQVHGAVVRT-GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD--------- 270
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
VVSWNA I+G +G + AL L +K + P +T
Sbjct: 271 ----------------------VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFT 308
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
++L ACA LGRQ H +VK F D FV L+DMY K G ++D +
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMVKAVADF------DEFVAVGLVDMYAKHGFLDDARK 362
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD--HVTMIGVLCACS-- 503
+F+ M RD + WNA+I GC+ +G E L LF +M G D T+ VL + +
Sbjct: 363 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422
Query: 504 ----HAGLVEEGRKYFSSMSKEHGLAPLKDHY------------------------TCMV 535
H V + +S H + L D Y T M+
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 536 DLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE-P 591
L + ++A L M ++PD+ + SLL AC G+ V L++ +
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFT 542
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
S+ L YA+ G + + +RG+V SW ++G
Sbjct: 543 SDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIV-----SWSAMIG 584
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 210/419 (50%), Gaps = 43/419 (10%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ GSAL+ S G +H+ L KS + + L+ +Y +C S AR VFD +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEI 63
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ VSW+SL+T Y NG DAL F M G+ +E L VV CA F G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFAL-PVVLKCAPDVRF--GA 120
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA L +L +D+ + NALV +Y G ++EAR +FD E V G
Sbjct: 121 QVHA-LAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD---------EYVGVGG---- 166
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
ERN VSWN +I+ Y +N ++ +A+G+FR + P + F ++
Sbjct: 167 --------------ERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVV 212
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
NAC DL+ GRQ H VV+ +G E D+F N+L+DMY K G +E +FE M
Sbjct: 213 NACTGSRDLEAGRQVHGAVVR------TGYEKDVFTANALVDMYSKLGDIEMAATVFEKM 266
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
D VSWNA I GC +G+ AL L +M G P+ T+ VL AC+ AG GR
Sbjct: 267 PAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGR 326
Query: 513 KYFSSMSKEHGLAPLKDHYTC-MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+ M K +A + +VD+ + G LD+A+ + + MP + D ++W +L++ C
Sbjct: 327 QIHGFMVK--AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR-DLILWNALISGC 382
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 144/301 (47%), Gaps = 31/301 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + A +L S S+++ TR+VHA K S+ + N LID Y KCG L A KV
Sbjct: 407 VNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKV 466
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + + ++ + +++T L QC D +A+
Sbjct: 467 FKESRSDDIISSTTMMTAL-------------------SQC------------DHGEDAI 495
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M + + S L+AC ++ G QVHA L K +++SDV+ G+AL+ Y
Sbjct: 496 KLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAY 555
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A F G+ ER IVSW+++I Q+G AL++F RM+ G+ P+ +TL
Sbjct: 556 AKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLT 615
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC + + + + ++D+ + GKL +A + + MP
Sbjct: 616 SVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPF 675
Query: 317 R 317
+
Sbjct: 676 Q 676
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 45/215 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + LL++C + ++VHA +IK QF S++F N L+ YAKCG + A F
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAF 568
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + + +W+++I GL AQH AL
Sbjct: 569 SGLPERGIVSWSAMIGGL-------------------------------AQHGHGKRALD 597
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M E A + + S LSAC AG VD F+ + + + +
Sbjct: 598 LFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY------A 651
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ID+ G+ G++ A + + M + N W +L+
Sbjct: 652 CMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 340/581 (58%), Gaps = 12/581 (2%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEYSFGSALS 159
+D A ++F +P+ + SWN ++ A +++ F++M H F ++++F +
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR--ERNI 217
A A F +G VH + K+ + DV++ ++LI Y CG + A VF+ + ++I
Sbjct: 249 AVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDI 308
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWNS++T + Q G AL++F RM G+ P+ VT+ SV+SACA G ++
Sbjct: 309 VSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDY 368
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+ R E + N L + NA +DM+ KCG++ AR +FD M R+VVS T+++ GYAK S
Sbjct: 369 IDRNEMMMN-LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK--RESVCPTHYTFGNLLNAC 395
AR +F M +++ +WN LI+GY Q+G +EAL +FR L+ + P T + L+AC
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A L + +G H ++ K ++ + SLIDMY K G VE +F ++ +
Sbjct: 488 AQLGAMDIGEWIHGYIKKERIQLNRN------LATSLIDMYSKSGDVEKAIEVFHSIGNK 541
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D W+AMI G A +G G A+ LF M KP+ VT +LCACSH+GLV+EG++ F
Sbjct: 542 DVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLF 601
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
M + +G+ P HY+CMVD+LGRAG L+EA IE MP+ P A +WG+LL AC +H N
Sbjct: 602 DEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN 661
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ L E +LLEIEP N G YVLLSN+YA+ G W V +R+ MR G+ K+ GCS IE
Sbjct: 662 LELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIE 721
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
I G V+ F+V D HPL+++IY L + ++ GYV N
Sbjct: 722 IDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANT 762
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 211/475 (44%), Gaps = 116/475 (24%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM--SNKNVFTWNSIITGLL 96
+ VH IK+ F ++F+ N LI YA CG L A VF+ + +NK++ +WNS++TG +
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFV 319
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
+ G+ D +AL F +M +E + + S
Sbjct: 320 QGGYPD-------------------------------KALDLFERMRNEGVHPNAVTMVS 348
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+SACA +++ +G +V + ++ ++ + +A IDM+ KCG V AR +FD M +R+
Sbjct: 349 VMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRD 408
Query: 217 IVS-------------------------------WNSLITCYEQNGPASDALEVF--VRM 243
+VS WN LI+ YEQ+G +AL +F +++
Sbjct: 409 VVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQL 468
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
SG PD+VTL S +SACA L A G IH + + E+++ + L +L+DMY+K G
Sbjct: 469 TKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK-ERIQLNRNLATSLIDMYSKSGD 527
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ +A VF + ++V ++M++G A +
Sbjct: 528 VEKAIEVFHSIGNKDVFVWSAMIAGLA-------------------------------MH 556
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G E A+ LF ++ V P TF NLL AC +H+ +V G R E
Sbjct: 557 GRGEAAIELFLDMQETQVKPNSVTFTNLLCAC-----------SHSGLVDEGKRLFDEME 605
Query: 424 SDIFV------GNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNG 471
V + ++D+ + G +E+ + E M S W A++ C +G
Sbjct: 606 RVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 150/294 (51%), Gaps = 2/294 (0%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
++ +C ++ +++ R+V I +++ + + N ID++ KCG + AR +FD M ++
Sbjct: 349 VMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRD 408
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF--VKM 142
V +W +II G K A +F SMP +D +WN ++SG+ Q R EAL F +++
Sbjct: 409 VVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQL 468
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ + S LSACA +G +H + K R + + ++LIDMY K G V
Sbjct: 469 TKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDV 528
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF + +++ W+++I +G A+E+F+ M + ++P+ VT +++ AC
Sbjct: 529 EKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCAC 588
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ EG ++ + R + + +VD+ + G L EA + MP+
Sbjct: 589 SHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPL 642
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 160/356 (44%), Gaps = 48/356 (13%)
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+FK+ QIHA+++R KL D YA SE
Sbjct: 150 TSFKQLKQIHAQMLRTNKLH----------DPYA--------------------ASELFT 179
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALI-AGYTQNGENEEALGLFRLLKRESVCPT 384
+ ++ S++ AR +F ++ + N+ SWN LI A T + + L R+L P
Sbjct: 180 AAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPN 239
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+TF L+ A A +G+ H +K D+FV NSLI Y CG ++
Sbjct: 240 KFTFPVLIKAVAERRCFLVGKAVHGMAIKTSF------GDDVFVLNSLIHFYASCGHLDL 293
Query: 445 GCRIFETMVE---RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+FE M+E +D VSWN+M+ G Q GY +AL LF++M G P+ VTM+ V+ A
Sbjct: 294 AYLVFE-MIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSA 352
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ + GRK + + + L + +D+ + G ++ A+ L + M + D V
Sbjct: 353 CAKTMNLTLGRKVCDYIDRNEMMMNL-NVCNATIDMFVKCGEVEIARGLFDNMEKR-DVV 410
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP-YVLLSNMYAELGRWGEVVRV 616
W +++ M +A+ + + P P + +L + Y + GR E + +
Sbjct: 411 SWTTIIDGYAK----MSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAI 462
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 44/211 (20%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ A D L +C + ++ +H I K + + LID+Y+K G
Sbjct: 467 QLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSG 526
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ A +VF + NK+VF W+++I GL A
Sbjct: 527 DVEKAIEVFHSIGNKDVFVWSAMIAGL-------------------------------AM 555
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSR 181
H R A+ F+ M + +F + L AC +G VD F +V+ ++ K++
Sbjct: 556 HGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTK 615
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ S ++D+ G+ G + A + +GM
Sbjct: 616 HY------SCMVDVLGRAGHLEEALKFIEGM 640
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/595 (38%), Positives = 340/595 (57%), Gaps = 39/595 (6%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++ NVF +++ K G I DA +F MP R++ SW +MV+G+A EA F
Sbjct: 149 ASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFR 208
Query: 141 KMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M E +E+ + LSA + + MG QVH L+ K V + ++L+ MY K
Sbjct: 209 QMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKA 268
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + A VF+ +ERN ++W+++IT Y QNG A A+ +F +M A+G P E TL V+
Sbjct: 269 GCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVL 328
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+AC+ + EG Q H +++ + + +ALVDMYAKCG C+ D
Sbjct: 329 NACSDVGTLMEGKQAHGLMVKL-GFEVQVYVKSALVDMYAKCG------CIGD------- 374
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
A+ F + E ++V W A++ G+ QNGE E+AL L+ + +E
Sbjct: 375 ------------------AKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKE 416
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P T +LL ACA LA L+ G+Q HT ++K G + VG++L MY KC
Sbjct: 417 GVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGAS------VGSALSTMYSKC 470
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++EDG +F M RD ++WN++I G +QNG G +A+ LF++M L G PD VT I VL
Sbjct: 471 GNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVL 530
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACSH GLV+ G YF SM K++GL P DHY CMVD+L RAG L EAK IE++ +
Sbjct: 531 CACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHG 590
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+W +L AC+ R+ +G Y +KL+++ +S Y+LLSN+YA +W +V RVR L
Sbjct: 591 TCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYL 650
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
M+ GV K PGCSW+E+ V+VF+V +++HP + I L+ L + MK GY P
Sbjct: 651 MKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNP 705
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 267/560 (47%), Gaps = 75/560 (13%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
LAF + ++ R+ D +HA +KS +S + N LI Y+
Sbjct: 7 LAFTGQVSHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSS------- 59
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDR 131
F ++ F+ A +FA +P RD SWNS+++ + H R
Sbjct: 60 ---FPRL-------------------FLPAAFAVFADIPAAARDVASWNSLLNPLSHH-R 96
Query: 132 FSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMG 189
AL +F M S + L S +SF +A +A A + G VHAL K SS+V++
Sbjct: 97 PLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVS 156
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
+AL++MY K G + A+ VFD M RN VSW +++ Y + +A E+F +M+ +
Sbjct: 157 TALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPL 216
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+E +V+SA + G+Q+H +++ + + + + N+LV MYAK G ++ A
Sbjct: 217 HKNEFVATAVLSAISVPLGLPMGVQVHGLVVK-DGMVGFVSVENSLVTMYAKAGCMDAAF 275
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF+ RN ++ ++M++GY++ + +SA MF++M AG+
Sbjct: 276 HVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHA----------AGFP------- 318
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
PT +T +LNAC+++ L G+QAH +VK G E ++V
Sbjct: 319 --------------PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGF------EVQVYV 358
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
++L+DMY KCG + D F E D V W AM+ G QNG +AL L+ +M G
Sbjct: 359 KSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGV 418
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
P+ +T+ +L AC+ +E G++ + + K G + + + + G L++
Sbjct: 419 FPNTLTITSLLRACAGLAALEPGKQLHTQILK-FGFGLGASVGSALSTMYSKCGNLEDGM 477
Query: 549 TLIEAMPMQPDAVIWGSLLA 568
+ MP + D + W S+++
Sbjct: 478 VVFRRMPHR-DVIAWNSIIS 496
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F ++ LL +C ++ +++H +I+K F + + L +Y+KCG L
Sbjct: 419 FPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMV 478
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
VF +M +++V WNSII+G + G +DA LF M
Sbjct: 479 VFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEM 514
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/653 (35%), Positives = 366/653 (56%), Gaps = 69/653 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A L C + ++H+ +K E+ + N L+ +YAKC CL
Sbjct: 245 LACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCL----------- 293
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DDA RLF MP+ D +WN M+SG Q+ F EA G F
Sbjct: 294 --------------------DDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYD 333
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + S L A K G +VH + ++ + DV++ SAL+D+Y KC
Sbjct: 334 MQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRD 393
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A+ ++D R ++V +++I+ Y NG + +AL++F ++ I+P+ VT+ASV+
Sbjct: 394 VRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPG 453
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS+AA G QIH ++R R V +AL+DMYAKCG+L+
Sbjct: 454 CASMAALPLGQQIHGYVLRNAYERKCYV-ESALMDMYAKCGRLD---------------- 496
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+S Y +F KM +++ V+WN++I+ ++QNG+ +EAL LFR + E +
Sbjct: 497 ----LSHY-----------IFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGI 541
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ T L+ACA+L + G++ H +K ++ +DIF ++LIDMY KCG+
Sbjct: 542 KYNNITISAALSACASLPAIYYGKEIHGVTIKGPIK------ADIFAESALIDMYAKCGN 595
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E R+FE M +++ VSWN++I +G E++ L M G KPDHVT + ++ A
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISA 655
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGLVEEG + F M+K++ +AP +H+ CMVDL R+G LD+A I MP +PDA
Sbjct: 656 CAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAG 715
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL AC+VHRN+ L + +++L +++P+NSG YVL+SN+ A GRW V +VR+LM+
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
++K PG SW+++ ++F+ DK HP +++IY LK L +E++ GYVP
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVP 828
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 263/560 (46%), Gaps = 79/560 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ SC ++S R VH A+++++ + L+ +YA G L AR F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +PERD WN M+ G + A+
Sbjct: 200 D-------------------------------GIPERDCVLWNVMMDGCIKAGDVDGAVR 228
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + + + LS CA D G Q+H+L K +V + + L+ MY
Sbjct: 229 LFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYA 288
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A R+F+ M + ++V+WN +I+ QNG +A +F M SG PD +TL S
Sbjct: 289 KCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVS 348
Query: 258 VVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ A L K+G ++H ++R C + D+ L +ALVD+Y KC + A+ ++D
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIVRNCVNM--DVFLVSALVDIYFKCRDVRMAQNLYDAARA 406
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+VV ++M+SG Y NG +EEAL +FR L
Sbjct: 407 IDVVIGSTMISG-------------------------------YVLNGMSEEALQMFRYL 435
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P T ++L CA++A L LG+Q H +V+++ E +V ++L+DMY
Sbjct: 436 LEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAY------ERKCYVESALMDMY 489
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG ++ IF M ++D V+WN+MI +QNG EAL LF++M + G K +++T+
Sbjct: 490 AKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITIS 549
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEA 553
L AC+ + G++ K P+K + ++D+ + G L+ A + E
Sbjct: 550 AALSACASLPAIYYGKEIHGVTIK----GPIKADIFAESALIDMYAKCGNLELALRVFEF 605
Query: 554 MPMQPDAVIWGSLLAACKVH 573
MP + V W S+++A H
Sbjct: 606 MP-DKNEVSWNSIISAYGAH 624
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 232/479 (48%), Gaps = 59/479 (12%)
Query: 103 DASRLFASMPERDQCS---WNSMVSGFAQHDRFSEALGYFVKMHSENFALSE--YSFGSA 157
DA +F+++P S WN ++ GF + A+ ++VKM S A S ++
Sbjct: 88 DAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYV 147
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
+ +CA +G VH ++DVY+GSAL+ MY G + AR FDG+ ER+
Sbjct: 148 VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDC 207
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V WN ++ + G A+ +F M ASG EP+ TLA +S CA+ A G Q+H+
Sbjct: 208 VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++C L ++ + N L+ MYAKC L++A +F+ MP
Sbjct: 268 AVKC-GLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP---------------------- 304
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
+ ++V+WN +I+G QNG EA GLF ++R P T +LL A +
Sbjct: 305 ---------QDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTD 355
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L L+ G++ H ++V++ + D+F+ ++L+D+Y KC V +++ D
Sbjct: 356 LNGLKQGKEVHGYIVRNCVNM------DVFLVSALVDIYFKCRDVRMAQNLYDAARAIDV 409
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V + MI G NG EAL +F+ +L KP+ VT+ VL C+ + G++
Sbjct: 410 VIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQI--- 466
Query: 518 MSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
HG L++ Y + ++D+ + G LD + + M Q D V W S++++
Sbjct: 467 ----HGYV-LRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS-QKDEVTWNSMISS 519
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 214/451 (47%), Gaps = 69/451 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS LL + + + VH I+++ ++F+ + L+D+Y KC + A+ ++
Sbjct: 342 DSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLY 401
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +V +++I+G + G ++A ++F + E QC + V
Sbjct: 402 DAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLE--QCIKPNAV-------------- 445
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ S L CA +G Q+H + ++ Y Y+ SAL+DMY
Sbjct: 446 ---------------TIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYA 490
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCGR+ + +F M +++ V+WNS+I+ + QNG +AL++F +M GI+ + +T+++
Sbjct: 491 KCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISA 550
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACASL A G +IH ++ ++ D+ +AL+DMYAKCG L A VF+ MP +
Sbjct: 551 ALSACASLPAIYYGKEIHGVTIK-GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDK 609
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N VS WN++I+ Y +G +E++ L ++
Sbjct: 610 NEVS-------------------------------WNSIISAYGAHGLVKESVSLLHGMQ 638
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E P H TF L++ACA+ ++ G Q + K ++L + F ++D+Y
Sbjct: 639 EEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTK---KYLIAPRMEHFA--CMVDLYS 693
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G ++ + M + D W A++ C
Sbjct: 694 RSGKLDKAIQFIADMPFKPDAGIWGALLHAC 724
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 350/613 (57%), Gaps = 39/613 (6%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-LYGARKVFDKMSNKNVFTWNS 90
S S ++ +HA +I++Q ++ F+ + +I Y+ L+ A VF+++ + WN
Sbjct: 27 SISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNH 86
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
M+ G +Q D EA+ + +MH + +
Sbjct: 87 -------------------------------MIRGLSQSDHPVEAIHMYTRMHHQGITGN 115
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
+ ACA D G ++H K + S +++ +ALI MY CG++ A+++FD
Sbjct: 116 NLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFD 175
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
GM +R++VSWN+LI Y Q + L +F M A+ I+ D VT+ ++ AC+ L + E
Sbjct: 176 GMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDW-E 234
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
+ ++ L D+ LGN L+DMY + A+ VFDRM RN+VS ++V G+A
Sbjct: 235 FADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHA 294
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K ++ +AR +F M +R+V+SW ++I GY+Q + +A+ LF+ + V P T +
Sbjct: 295 KVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVAS 354
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+ACA+L L +G H ++ +HG+ ++DI+VGNSLIDMY KCG VE +F
Sbjct: 355 VLSACAHLGKLDVGWAVHHYIRRHGV------QADIYVGNSLIDMYCKCGMVEKALEVFH 408
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M ++D VSW ++I G A NG+ AL LF +ML G +P H T +G+L AC+HAGLV +
Sbjct: 409 RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNK 468
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G +YF SM HGL P HY C+VDLL R+G +D+A I+ MP+ PD V+W LL+AC
Sbjct: 469 GLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSAC 528
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
K+H N++L E K+LLE++P +SG YVLLSN YA + RW + +++R+LM V K G
Sbjct: 529 KLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSG 588
Query: 631 CSWIEILGHVNVF 643
S IE+ G V+ +
Sbjct: 589 SSSIEVDGMVSNY 601
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 221/485 (45%), Gaps = 112/485 (23%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L +C R + R++H +K F S +F+ N LI +YA CG L A+K+FD M +++
Sbjct: 122 LFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 181
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ +WN++I G++Q++++ E L F M +
Sbjct: 182 LVSWNTLIC-------------------------------GYSQYNKYKEVLRLFDAMTA 210
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG------- 197
N + + AC+ D++ + + ++ DVY+G+ LIDMYG
Sbjct: 211 ANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAEL 270
Query: 198 ------------------------KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
K G ++ AR++FD M +R+++SW S+IT Y Q
Sbjct: 271 AQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQF 330
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
SDA+++F MMA+ ++PD+VT+ASV+SACA L G +H +R ++ D+ +GN+
Sbjct: 331 SDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVH-HYIRRHGVQADIYVGNS 389
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+DMY KCG + +A VF RM ++ VS TS++SG A
Sbjct: 390 LIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLA----------------------- 426
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
NG AL LF + RE V PTH TF +L AC AH +V
Sbjct: 427 --------VNGFANSALDLFSQMLREGVQPTHGTFVGILLAC-----------AHAGLVN 467
Query: 414 HGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVG 466
GL + ES + ++ +D+ + G+++ + M + D V W ++
Sbjct: 468 KGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSA 527
Query: 467 CAQNG 471
C +G
Sbjct: 528 CKLHG 532
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C + VH I + ++I++ N LID+Y KCG + A +VF
Sbjct: 348 DKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF 407
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+M +K+ +W S+I+GL GF + A LF+ M
Sbjct: 408 HRMKDKDSVSWTSVISGLAVNGFANSALDLFSQM 441
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 354/648 (54%), Gaps = 69/648 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L++C + R++H ++K + F N L+D+Y+K G + GA V
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV-------- 240
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
F + D SWN++++G HD AL +M
Sbjct: 241 -----------------------FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKG 277
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++ SAL ACA ++G Q+H+ L K SD++ L+DMY KC +
Sbjct: 278 SGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDD 337
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
ARR +D M +++I++WN+LI+ Y Q G DA+ +F +M + I+ ++ TL++V+ + AS
Sbjct: 338 ARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVAS 397
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L A K QIH ++ + +D + N+L+D Y KC ++EA +
Sbjct: 398 LQAIKVCKQIHTISIK-SGIYSDFYVINSLLDTYGKCNHIDEASKI-------------- 442
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
F + ++V++ ++I Y+Q G+ EEAL L+ ++ + P
Sbjct: 443 -----------------FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPD 485
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ +LLNACANL+ + G+Q H H +K G DIF NSL++MY KCGS+ED
Sbjct: 486 PFICSSLLNACANLSAYEQGKQLHVHAIKFGFM------CDIFASNSLVNMYAKCGSIED 539
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R F + R VSW+AMI G AQ+G+G EAL LF +ML G P+H+T++ VLCAC+H
Sbjct: 540 ADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
AGLV EG++YF M G+ P ++HY CM+DLLGR+G L+EA L+ ++P + D +WG
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL A ++H+NI LG+ AK L ++EP SG +VLL+N+YA G W V +VRK M+
Sbjct: 660 ALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSK 719
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V K+PG SWIEI V F+V D+ H + EIY L L + + GY
Sbjct: 720 VKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGY 767
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 198/688 (28%), Positives = 303/688 (44%), Gaps = 155/688 (22%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+HA +IK F+ + ++N L+ +Y+KC ARK+ D+ S
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESS------------------ 43
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
E D SW+S++SG+ Q+ EAL F +M +E++F S L
Sbjct: 44 -------------ELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLK 90
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
AC+ D MG +VH + + + SD ++ + L+ MY KCG + +RR+F G+ ERN+VS
Sbjct: 91 ACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVS 150
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN+L +CY Q+ +A+ +F M+ SGI P+E +++ +++ACA L G +IH ++
Sbjct: 151 WNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLML 210
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ L D NALVDMY+K G++ A VF +
Sbjct: 211 KM-GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA------------------------ 245
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+VVSWNA+IAG + N+ AL L +K P +T + L ACA +
Sbjct: 246 -------HPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+LGRQ H+ ++K SD+F L+DMY KC ++D R +++M ++D ++
Sbjct: 299 FKELGRQLHSSLIK------MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA 352
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA------------------ 501
WNA+I G +Q G +A+ LF KM + T+ VL +
Sbjct: 353 WNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISI 412
Query: 502 --------------------CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
C+H ++E K F + E +A YT M+ +
Sbjct: 413 KSGIYSDFYVINSLLDTYGKCNH---IDEASKIFEERTWEDLVA-----YTSMITAYSQY 464
Query: 542 GCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL----------- 587
G +EA L M ++PD I SLL AC L Y K L
Sbjct: 465 GDGEEALKLYLQMQDADIKPDPFICSSLLNACA-----NLSAYEQGKQLHVHAIKFGFMC 519
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
+I SNS L NMYA+ G + R + RG+V SW ++G
Sbjct: 520 DIFASNS-----LVNMYAKCGSIEDADRAFSEIPNRGIV-----SWSAMIGGY------- 562
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+H KE L +M R G PN
Sbjct: 563 AQHGHGKEAL----RLFNQMLRDGVPPN 586
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/560 (27%), Positives = 267/560 (47%), Gaps = 87/560 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + ++ R+VH + + F S+ F+ N L+ +YAKCG L
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLL----------- 133
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DD+ RLF + ER+ SWN++ S + Q + EA+G F +
Sbjct: 134 --------------------DDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E+S L+ACAG + +G ++H L+ K D + +AL+DMY K G
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGE 233
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF + ++VSWN++I + AL + M SG P+ TL+S + A
Sbjct: 234 IEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKA 293
Query: 262 CASLAAFKE-GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
CA++ FKE G Q+H+ L++ + +DL LVDMY+KC +++AR +D MP ++++
Sbjct: 294 CAAM-GFKELGRQLHSSLIKMDA-HSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDII 351
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ +++SGY +Q G++ +A+ LF + E
Sbjct: 352 AWNALISGY-------------------------------SQCGDHLDAVSLFSKMFSED 380
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ T +L + A+L +++ +Q HT +K G+ SD +V NSL+D Y KC
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY------SDFYVINSLLDTYGKCN 434
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+++ +IFE D V++ +MI +Q G G EAL L+ +M KPD +L
Sbjct: 435 HIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLN 494
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC-------MVDLLGRAGCLDEAKTLIEA 553
AC++ E+G K+ + +K + C +V++ + G +++A
Sbjct: 495 ACANLSAYEQG--------KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSE 546
Query: 554 MPMQPDAVIWGSLLAACKVH 573
+P + V W +++ H
Sbjct: 547 IPNR-GIVSWSAMIGGYAQH 565
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 147/310 (47%), Gaps = 32/310 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K D+ F + + + +L S +++ +++H IKS S+ ++ N L+D Y KC
Sbjct: 375 KMFSEDIDF-NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKC 433
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ A K+F++ + +++ + S+IT ++
Sbjct: 434 NHIDEASKIFEERTWEDLVAYTSMIT-------------------------------AYS 462
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+ EAL +++M + + S L+ACA ++ G Q+H K + D++
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIF 522
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
++L++MY KCG + A R F + R IVSW+++I Y Q+G +AL +F +M+ G
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDG 582
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+ +TL SV+ AC EG Q ++ ++ ++D+ + GKLNEA
Sbjct: 583 VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEA 642
Query: 308 RCVFDRMPIR 317
+ + +P
Sbjct: 643 VELVNSIPFE 652
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/597 (38%), Positives = 334/597 (55%), Gaps = 18/597 (3%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-FALSEYSFGSA 157
G + A LF +P+ D +W ++S +H R EA+ Y+ +N + S
Sbjct: 25 GDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSV 84
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
ACA D +VH + + SDV +G+ALIDMYGKC AR VF+GM R++
Sbjct: 85 AKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDV 144
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+SW S+ +CY G +AL F +M +G P+ VT++S++ AC L K G ++H
Sbjct: 145 ISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGF 204
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++R + ++ + +ALV+MYA C + +A+ VFD M R+ VS +++ Y +
Sbjct: 205 VVR-NGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEK 263
Query: 338 ARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+F +M+ N SWNA+I G QNG E+AL + ++ P T ++L
Sbjct: 264 GLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLP 323
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC NL L+ G+Q H ++ +H D+ +L+ MY KCG +E R+F M
Sbjct: 324 ACTNLESLRGGKQIHGYIFRHWFF------QDLTTTTALVFMYAKCGDLELSRRVFSMMT 377
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+RD VSWN MI+ + +G G EAL LF++M+ G +P+ VT GVL CSH+ LV+EG
Sbjct: 378 KRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLL 437
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
F SMS++H + P DH++CMVD+L RAG L+EA I+ MP++P A WG+LL C+V+
Sbjct: 438 IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVY 497
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N+ LG A +L EIE N G YVLLSN+ W E RKLMR RGV K PGCSW
Sbjct: 498 KNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSW 557
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
I++ V+ F+V DK + + EIY L + +M+ GY+PN D E EE
Sbjct: 558 IQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEE 614
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 198/482 (41%), Gaps = 116/482 (24%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C + V + +RVH I+ F S++ + N LID+Y KC C GAR VF+
Sbjct: 87 ACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE--------- 137
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
MP RD SW SM S + EALG F KM
Sbjct: 138 ----------------------GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGE 175
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ + S L AC D K G +VH + ++ +V++ SAL++MY C + A+
Sbjct: 176 RPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQL 235
Query: 208 VFDGMRERNIVSWNSLITCY-----------------------------------EQNGP 232
VFD M R+ VSWN LIT Y QNG
Sbjct: 236 VFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGR 295
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
ALEV RM SG +P+++T+ SV+ AC +L + + G QIH + R DL
Sbjct: 296 TEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFR-HWFFQDLTTTT 354
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
ALV MYAKCG L +R VF M R+ VS +M
Sbjct: 355 ALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTM--------------------------- 387
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
I + +G EEAL LFR + V P TF +L+ C +H+ +V
Sbjct: 388 ----IIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGC-----------SHSRLV 432
Query: 413 KHGLRFLSGEESDIFV------GNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
GL D V + ++D+ + G +E+ + M +E +W A++
Sbjct: 433 DEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLG 492
Query: 466 GC 467
GC
Sbjct: 493 GC 494
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 76/436 (17%)
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+LSK S ++ I +Y G + AR +FD + + ++ +W LI+ ++G + +
Sbjct: 1 MLSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLE 60
Query: 236 ALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
A++ + +EPD++ L SV ACASL ++H +R +D++LGNAL
Sbjct: 61 AIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRF-GFCSDVLLGNAL 119
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+DMY KC AR VF+ MP R+V+S TSM S Y ++
Sbjct: 120 IDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLR------------------ 161
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
EALG FR + P T ++L AC +L DL+ GR+ H VV++
Sbjct: 162 -------------EALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRN 208
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV--------- 465
G+ ++FV ++L++MY C S+ +F++M RD VSWN +I
Sbjct: 209 GM------GGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECE 262
Query: 466 --------------------------GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GC QNG +AL + +M G KP+ +T+ VL
Sbjct: 263 KGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVL 322
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC++ + G++ + + L T +V + + G L+ ++ + M + D
Sbjct: 323 PACTNLESLRGGKQIHGYIFRHWFFQDLTT-TTALVFMYAKCGDLELSRRVFSMMTKR-D 380
Query: 560 AVIWGSLLAACKVHRN 575
V W +++ A +H N
Sbjct: 381 TVSWNTMIIATSMHGN 396
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 165/335 (49%), Gaps = 5/335 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S + +L +C K + R VH ++++ +F+ + L+++YA C + A+ VF
Sbjct: 178 NSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVF 237
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
D MS ++ +WN +IT + +F M + SWN+++ G Q+ R
Sbjct: 238 DSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTE 297
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+AL +M + F ++ + S L AC + G Q+H + + + D+ +AL+
Sbjct: 298 KALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALV 357
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KCG + +RRVF M +R+ VSWN++I +G +AL +F M+ SG+ P+ V
Sbjct: 358 FMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSV 417
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T V+S C+ EGL I + R + D + +VD+ ++ G+L EA +
Sbjct: 418 TFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKK 477
Query: 314 MPIRNVVSE-TSMVSGYAKASSVKSARLMFTKMLE 347
MPI +++ G +V+ R+ ++ E
Sbjct: 478 MPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFE 512
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/708 (33%), Positives = 384/708 (54%), Gaps = 81/708 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L +C K + ++VH ++ S F ++F+ N L+ +YAKC ++++FD++
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMV---SGFAQHDRFSE 134
+NV +WN++ + ++ F +A LF M + ++ S +SMV +G R
Sbjct: 220 ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKI 279
Query: 135 ALGYFVKM------HSENFALSEY----------------------SFGSALSAC----- 161
GY +K+ S N + Y S+ + ++ C
Sbjct: 280 IHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEH 339
Query: 162 ---AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
A + +M Q+H+ L K SD+++ L+DMY KC + AR F+ + E++++
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WN++I+ Y Q +AL +FV M GI ++ TL++++ + A L Q+H
Sbjct: 400 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 459
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ +D+ + N+L+D Y KC S V+ A
Sbjct: 460 VK-SGFHSDIYVVNSLIDSYGKC-------------------------------SHVEDA 487
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+F + ++VS+ ++I Y Q G+ EEAL LF ++ + P + +LLNACANL
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ + G+Q H H++K+G DIF GNSL++MY KCGS++D R F + ER V
Sbjct: 548 SAFEQGKQLHVHILKYGFVL------DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 601
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW+AMI G AQ+G+G +AL LF +ML G P+H+T++ VL AC+HAGLV E + YF SM
Sbjct: 602 SWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESM 661
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ G P+++HY CM+DLLGRAG ++EA L+ MP + +A +WG+LL A ++H+++ L
Sbjct: 662 EELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVEL 721
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G A+ L +EP SG +VLL+N+YA G+W V VR+LMR V K+PG SWIE+
Sbjct: 722 GRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKD 781
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQN 686
V F+V D+ H ++EIY L L+ M + GYVP D EQ+
Sbjct: 782 KVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQS 829
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 295/598 (49%), Gaps = 83/598 (13%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S ++KLL C +KS+ ++HA I KS + + I+N LI++Y+KC ARK+ D
Sbjct: 56 SVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVD 115
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ S E D SW++++SG+AQ+ AL
Sbjct: 116 ESS-------------------------------EPDLVSWSALISGYAQNGLGGGALMA 144
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +MH +E++F S L AC+ D ++G QVH ++ S + DV++ + L+ MY K
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK 204
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C ++R+FD + ERN+VSWN+L +CY Q +A+ +F M+ SGI+P+E +L+S+
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
V+AC L G IH L++ D NALVDMYAK G L +A VF+++ +
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKL-GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPD 323
Query: 319 VVSETSMVSG-------------------------------------------YAKASSV 335
+VS ++++G Y+K +
Sbjct: 324 IVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ AR+ F + E+++++WNA+I+GY+Q E+ EAL LF + +E + T +L +
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A L + + RQ HGL SG SDI+V NSLID Y KC VED RIFE
Sbjct: 444 AGLQVVHVCRQV------HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIG 497
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VS+ +MI AQ G G EAL LF +M KPD +L AC++ E+G++
Sbjct: 498 DLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH 557
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ K +G +V++ + G +D+A + + V W +++ H
Sbjct: 558 VHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQH 613
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 190/392 (48%), Gaps = 53/392 (13%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
NF + S+ LS C + + G Q+HA ++KS S D + + LI++Y KC A
Sbjct: 51 NFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYA 110
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R++ D E ++VSW++LI+ Y QNG AL F M G++ +E T +SV+ AC+ +
Sbjct: 111 RKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIV 170
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ G Q+H ++ D+ + N LV MYAKC + +++ +FD +P RNV
Sbjct: 171 KDLRIGKQVHG-VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV------ 223
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
VSWNAL + Y Q EA+GLF + + P
Sbjct: 224 -------------------------VSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNE 258
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
++ +++NAC L D G+ H +++K G + D F N+L+DMY K G + D
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW------DPFSANALVDMYAKVGDLADA 312
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM--------LLCGEKPDHVTMIG 497
+FE + + D VSWNA+I GC + + +AL L +M + + D +G
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVG 372
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
++ S L+E+ R F+ L P KD
Sbjct: 373 LVDMYSKCDLLEDARMAFN-------LLPEKD 397
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 167/327 (51%), Gaps = 42/327 (12%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P V+ + ++S C + + + GLQIHA + + L +D + N L+++Y+KC AR
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITK-SGLSDDPSIRNHLINLYSKCRXFGYAR- 111
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+V E+S E ++VSW+ALI+GY QNG A
Sbjct: 112 --------KLVDESS----------------------EPDLVSWSALISGYAQNGLGGGA 141
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L F + V +TF ++L AC+ + DL++G+Q HG+ +SG E D+FV
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV------HGVVVVSGFEGDVFVA 195
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+ MY KC D R+F+ + ER+ VSWNA+ Q + EA+GLF +M+L G K
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 490 PDHVTMIGVLCACSHAGLVEEGR-KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
P+ ++ ++ AC+ GL + R K + G +VD+ + G L +A
Sbjct: 256 PNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRN 575
++ E + QPD V W +++A C +H +
Sbjct: 314 SVFEKIK-QPDIVSWNAVIAGCVLHEH 339
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 39/371 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ + + +L S + V R+VH +KS F S+I++ N LID Y KC + A ++
Sbjct: 431 FNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERI 490
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ + ++ ++ S+IT ++G ++A +LF M + + + DRF +
Sbjct: 491 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME-----------LKPDRFVCS- 538
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
S L+ACA F+ G Q+H + K + D++ G++L++MY
Sbjct: 539 -------------------SLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMY 579
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A R F + ER IVSW+++I Q+G AL++F +M+ G+ P+ +TL
Sbjct: 580 AKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 639
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + ++D+ + GK+NEA + ++MP
Sbjct: 640 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPF 699
Query: 317 RNVVSETSMVSGYAKASS-----VKSARLMFTKMLERNVVSWNALIAG-YTQNGENEEAL 370
S + G A+ ++A ++F +LE + L+A Y G+ E
Sbjct: 700 EANASVWGALLGAARIHKDVELGRRAAEMLF--ILEPEKSGTHVLLANIYASAGKWENVA 757
Query: 371 GLFRLLKRESV 381
+ RL++ V
Sbjct: 758 EVRRLMRDSKV 768
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
LI Q E+ + + L+ + + PT ++ LL+ C L+ G Q H H+ K G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
L D + N LI++Y KC ++ + E D VSW+A+I G AQNG G
Sbjct: 87 L------SDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGG 140
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACS 503
AL F +M L G K + T VL ACS
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACS 168
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/726 (33%), Positives = 382/726 (52%), Gaps = 106/726 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L +C +SK+VS +VH +K + +++ LI++YAK GC+
Sbjct: 123 LASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM----------- 171
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
D+A +F ++P R +WN++++G+AQ AL F +
Sbjct: 172 --------------------DEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E + SA+SAC+ + G Q+H +S +D + + LID+Y KC R
Sbjct: 212 MGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSR 271
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S AR++FD M RN+VSW ++I+ Y QN ++A+ +F M +G +PD S++++
Sbjct: 272 LSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNS 331
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKL-----------RNDLVLG 291
C SLAA +G QIHA +++ CE L +D +
Sbjct: 332 CGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391
Query: 292 NALVDMYAKCGKLNEARCVFDRMPI----------------------------------- 316
NA+++ Y+K L EA +F RM
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451
Query: 317 ----RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++ + ++++ Y+K S V A+ +F + +++V WN++I G+ QN + EEA+ L
Sbjct: 452 SGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKL 511
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L + P +TF L+ + LA + G+Q H ++K G+ ++D V N+L
Sbjct: 512 FNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGV------DNDPHVSNAL 565
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +++G +FE+ D + WN+MI AQ+G+ EAL +F+ M +P++
Sbjct: 566 IDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNY 625
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT +GVL AC+HAG V EG +F+SM + + P +HY +V+L GR+G L AK IE
Sbjct: 626 VTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIE 685
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++P A +W SLL+AC + N +G Y A+ L +P++SGPYVLLSN+YA G W +
Sbjct: 686 RMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWAD 745
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V +R+ M G VK+ GCSWIE+ V+ F+V+ + HP + IY VL LT +K +GY
Sbjct: 746 VHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGY 805
Query: 673 VPNASD 678
VP+ SD
Sbjct: 806 VPDTSD 811
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 270/554 (48%), Gaps = 48/554 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F N ++ G G + DA LF MP R+ SW S++S + QH R A+ FV
Sbjct: 52 DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111
Query: 144 SENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ + +E+ S L AC S +G QVH + K ++VY+G+ALI++Y K G +
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF + R V+WN++IT Y Q G ALE+F RM G+ PD LAS VSAC
Sbjct: 172 DEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSAC 231
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
++L + G QIH R D + N L+D+Y KC +L+ AR +FD M RN+VS
Sbjct: 232 SALGFLEGGRQIHGYAYR-SATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
T+M+SGY + S A MF WN AG+ +G
Sbjct: 291 TTMISGYMQNSFNAEAITMF----------WNMTQAGWQPDG------------------ 322
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
+ ++LN+C +LA + GRQ H HV+K L E+D +V N+LIDMY KC +
Sbjct: 323 ---FACTSILNSCGSLAAIWQGRQIHAHVIKADL------EADEYVKNALIDMYAKCEHL 373
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ +F+ + E D +S+NAMI G ++N EA+ +F++M +P +T + +L
Sbjct: 374 TEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL-GV 432
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
S + L E K + + G + + ++D+ + +++AKT+ + + D VI
Sbjct: 433 SSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYK-DMVI 491
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP----YVLLSNMYAELGRWGEVVRVRK 618
W S++ H GE K ++ S P +V L + + L +
Sbjct: 492 WNSMIFG---HAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHA 548
Query: 619 LMRKRGVVKQPGCS 632
+ K GV P S
Sbjct: 549 WIIKAGVDNDPHVS 562
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 204/413 (49%), Gaps = 47/413 (11%)
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
++ +HA + + D+++ + L+ Y GR+ AR +FD M RN+VSW S+I+ Y
Sbjct: 35 RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94
Query: 228 EQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q+G A+ +FV + E P+E LASV+ AC A G Q+H ++ + L
Sbjct: 95 TQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLD-LDA 153
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ +G AL+++YAK G ++EA VF +P+R V+ ++++GYA
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYA---------------- 197
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
Q G AL LF + E V P + + ++AC+ L L+ GRQ
Sbjct: 198 ---------------QIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQ 242
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
HG + S E+D V N LID+Y KC + ++F+ M R+ VSW MI G
Sbjct: 243 I------HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISG 296
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
QN + EA+ +F M G +PD +L +C + +GR+ + + K A
Sbjct: 297 YMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK----AD 352
Query: 527 LK-DHYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
L+ D Y ++D+ + L EA+ + +A+ + DA+ + +++ +R++
Sbjct: 353 LEADEYVKNALIDMYAKCEHLTEARAVFDALA-EDDAISYNAMIEGYSKNRDL 404
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 246/552 (44%), Gaps = 123/552 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A + +C + R++H +S ++ + N LID+Y KC L ARK+F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP------------------------- 112
D M +N+ +W ++I+G ++ F +A +F +M
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339
Query: 113 --------------ERDQCSWNSMVSGFAQHDRFSEALGYF--------------VKMHS 144
E D+ N+++ +A+ + +EA F ++ +S
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399
Query: 145 ENFALSE-----------------YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+N L+E +F S L + + ++ Q+H L+ KS S D+Y
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLY 459
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
SALID+Y KC V+ A+ VF+ + +++V WNS+I + QN +A+++F +++ SG
Sbjct: 460 AASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG 519
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+E T ++V+ ++LA+ G Q HA +++ + ND + NAL+DMYAKCG + E
Sbjct: 520 MAPNEFTFVALVTVASTLASMFHGQQFHAWIIKA-GVDNDPHVSNALIDMYAKCGFIKEG 578
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +F+ +V+ SM++ YA Q+G E
Sbjct: 579 RMLFESTCGEDVICWNSMITTYA-------------------------------QHGHAE 607
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES--D 425
EAL +FRL+ V P + TF +L+AC AH V GL + +S D
Sbjct: 608 EALQVFRLMGEAEVEPNYVTFVGVLSAC-----------AHAGFVGEGLNHFNSMKSNYD 656
Query: 426 IFVG----NSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
I G S+++++ + G + E M ++ W +++ C + +G +G +
Sbjct: 657 IEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSAC--HLFGNAEIGRY 714
Query: 481 -KKMLLCGEKPD 491
+M L + D
Sbjct: 715 AAEMALLADPTD 726
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 358/625 (57%), Gaps = 45/625 (7%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMS----NKNVFTWNSIITGLLKWGFIDDASRLFASM 111
I+NRLI ++ CL + + + +++ + N ++ +G + + R+
Sbjct: 12 IKNRLIQGFS---CLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQT 68
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
E + +N+M+ G +D F E++ + M E + ++F L ACA +D ++G
Sbjct: 69 KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGV 128
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
++H+L+ K+ +D ++ +LI++Y KCG + A +VFD + ++N SW + I+ Y G
Sbjct: 129 KMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVG 188
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+A+++F R++ G+ PD +L V+SAC + G I ++ +
Sbjct: 189 KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWI-----------DEYITE 237
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N +V RNV T++V Y K +++ AR +F MLE+N+V
Sbjct: 238 NGMV---------------------RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIV 276
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW+++I GY NG +EAL LF + E + P Y +L +CA L L+LG A +
Sbjct: 277 SWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLI 336
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+G FL +G +LIDMY KCG ++ +F M ++D V WNA I G A +G
Sbjct: 337 --NGNEFLDNS----VLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSG 390
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ +ALGLF +M G KPD T +G+LCAC+HAGLVEEGR+YF+SM L P +HY
Sbjct: 391 HVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHY 450
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDLLGRAGCLDEA LI++MPM+ +A++WG+LL C++HR+ L E V KKL+ +EP
Sbjct: 451 GCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEP 510
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
+SG YVLLSN+YA +W E ++R +M +RGV K PG SWIE+ G V+ F+V D HP
Sbjct: 511 WHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHP 570
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNA 676
L+++IY L L +++K GYVP
Sbjct: 571 LSEKIYAKLGELAKDLKAAGYVPTT 595
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 223/457 (48%), Gaps = 81/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F +L +C R ++H+ ++K+ ++ F++ LI++Y KCG + A KVF
Sbjct: 107 DSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVF 166
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + +KN +W + I+G + G +A +F + E
Sbjct: 167 DDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE------------------------ 202
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + ++F+L E LSAC + D + G + ++++ +V++ +AL+D YG
Sbjct: 203 --MGLRPDSFSLVE-----VLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYG 255
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VFDGM E+NIVSW+S+I Y NG +AL++F +M+ G++PD +
Sbjct: 256 KCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVG 315
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ +CA L A + G + L+ + ++ VLG AL+DMYAKCG+++ A VF M +
Sbjct: 316 VLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKK 374
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V + +SG A + VK +ALGLF ++
Sbjct: 375 DRVVWNAAISGLAMSGHVK-------------------------------DALGLFGQME 403
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE------SDIFVGNS 431
+ + P TF LL AC H +V+ G R+ + E +I
Sbjct: 404 KSGIKPDRNTFVGLLCAC-----------THAGLVEEGRRYFNSMECVFTLTPEIEHYGC 452
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ ++ ++M +E + + W A++ GC
Sbjct: 453 MVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/672 (34%), Positives = 373/672 (55%), Gaps = 75/672 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL C + + +V +IIK + S + + N L+D Y K
Sbjct: 148 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK----------- 196
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
SN+ +D A +LF MPE D S+N+M++G+++ +A+
Sbjct: 197 ---SNR-----------------LDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVN 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FV+M + +E++F + L A G D +G Q+H+ + K+ + +V++ +AL+D Y
Sbjct: 237 LFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 296
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K V AR++FD M E++ VS+N +I+ Y +G A ++F + + + + A+
Sbjct: 297 KHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFAT 356
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S ++ ++ G QIHA+ + +++++GN+LVDMYAKCGK E
Sbjct: 357 MLSIASNTLDWEMGRQIHAQTI-VTTADSEILVGNSLVDMYAKCGKFEE----------- 404
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A ++FT + R+ V W A+I+ Y Q G EE L LF ++
Sbjct: 405 --------------------AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ SV TF +LL A A++A L LG+Q H+ ++K G S++F G++L+D+Y
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM------SNVFSGSALLDVYA 498
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS++D + F+ M +R+ VSWNAMI AQNG L FK+M+L G +PD V+ +G
Sbjct: 499 KCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLG 558
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH+GLVEEG +F+SM++ + L P ++HY +VD+L R+G +EA+ L+ MP+
Sbjct: 559 VLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPID 618
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRV 616
PD ++W S+L AC++H+N L A +L +E ++ PYV +SN+YA G+W V +V
Sbjct: 619 PDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKV 678
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K MR RGV K P SW+EI ++F D+ HP +EI + MLT+ M+ +GY P+
Sbjct: 679 HKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDT 738
Query: 677 S-----DDEAYE 683
S +DE ++
Sbjct: 739 SCALHNEDEKFK 750
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 159/299 (53%), Gaps = 17/299 (5%)
Query: 274 IHARLMRC----EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
I AR+++ + R++ +GN L K G+L++AR +F++MP +N VS M+SGY
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFL-----KNGELSQARQLFEKMPHKNTVSTNMMISGY 93
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
K+ ++ AR +F M+ER V+W LI GY+Q + +EA LF ++R P + TF
Sbjct: 94 VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 153
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
LL+ C Q T ++K G +S + VGN+L+D Y K ++ C++F
Sbjct: 154 TLLSGCNGHEMGNQITQVQTQIIKLGY------DSRLIVGNTLVDSYCKSNRLDLACQLF 207
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M E D VS+NAMI G +++G +A+ LF +M G KP T VLCA +
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIV 267
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G++ S + K + + + ++D + + +A+ L + MP Q D V + +++
Sbjct: 268 LGQQIHSFVIKTNFVWNVFVS-NALLDFYSKHDSVIDARKLFDEMPEQ-DGVSYNVIIS 324
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/650 (36%), Positives = 354/650 (54%), Gaps = 75/650 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VH ++ F S++ I N LI +YAKCG
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGS------------------------------- 473
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
IDDA +F M +RD SWN+M+ G AQ+ EA F++M E ++ S L+
Sbjct: 474 IDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNT 533
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
+ + +VH ++ SD +GSA I MY +CG + AR +FD + R++ +W
Sbjct: 534 HGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTW 593
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N++I Q +AL +F++M G PD T +++SA A + ++H+
Sbjct: 594 NAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATD 653
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ DL +GNALV Y+KCG +VK A+
Sbjct: 654 AGLV--DLRVGNALVHTYSKCG-------------------------------NVKYAKQ 680
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F M+ERNV +W +I G Q+G +A F + RE + P T+ ++L+ACA+
Sbjct: 681 VFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGA 740
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ ++ H H V GL SD+ VGN+L+ MY KCGS++D +F+ MVERD SW
Sbjct: 741 LEWVKEVHNHAVSAGLV------SDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSW 794
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
MI G AQ+G G EAL F KM G KP+ + + VL ACSHAGLV+EGR+ F SM++
Sbjct: 795 TVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQ 854
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
++G+ P +HYTCMVDLLGRAG L+EA+ I MP++PD WG+LL AC + N+ + E
Sbjct: 855 DYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAE 914
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
+ AK+ L+++P ++ YVLLSN+YA G+W + + VR +M+++G+ K+PG SWIE+ +
Sbjct: 915 FAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRI 974
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA-----SDDEAYEEQ 685
+ F+V D HP +KEIY L L +K GYVP+ + D+ ++EQ
Sbjct: 975 HSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQ 1024
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 279/563 (49%), Gaps = 79/563 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS + +L CL+ + + ++VH IIKS +++ N+L+ VY +CG L AR+V
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK+ KN++ W + M+ G+A++ +A+
Sbjct: 176 FDKLLKKNIYIWTT-------------------------------MIGGYAEYGHAEDAM 204
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ KM E +E ++ S L AC V+ K G ++HA + +S + SDV + +AL++MY
Sbjct: 205 RVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMY 264
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A+ +FD M ERN++SW +I G +A +F++M G P+ T
Sbjct: 265 VKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYV 324
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S+++A AS A + ++H+ + L DL +GNALV MYAK G +++AR VFD M
Sbjct: 325 SILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++ S T M+ G A Q+G +EA LF +
Sbjct: 384 RDIFSWTVMIGGLA-------------------------------QHGRGQEAFSLFLQM 412
Query: 377 KRESVCPTHYTFGNLLN--ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+R P T+ ++LN A A+ + L+ + H H + G F+ SD+ +GN+LI
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAG--FI----SDLRIGNALIH 466
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCGS++D +F+ M +RD +SWNAM+ G AQNG G EA +F +M G PD T
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTT 526
Query: 495 MIGVLCACSHAGLVE---EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ +L +E E K+ + E GL + + + R G +D+A+ L
Sbjct: 527 YLSLLNTHGSTDALEWVNEVHKH----AVETGLISDFRVGSAFIHMYIRCGSIDDARLLF 582
Query: 552 EAMPMQPDAVIWGSLLAACKVHR 574
+ + ++ W +++ R
Sbjct: 583 DKLSVR-HVTTWNAMIGGAAQQR 604
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 216/426 (50%), Gaps = 40/426 (9%)
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ A+ +S+ + L C D + QVH + KS ++Y+ + L+ +Y +CGR+ C
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR+VFD + ++NI W ++I Y + G A DA+ V+ +M +P+E+T S++ AC
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
K G +IHA +++ ++D+ + ALV+MY KCG + +A+ +FD+M RNV+S T
Sbjct: 232 PVNLKWGKKIHAHIIQ-SGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+ G A G +EA LF ++RE P
Sbjct: 291 MIGGLA-------------------------------HYGRGQEAFHLFLQMQREGFIPN 319
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
YT+ ++LNA A+ L+ ++ H+H V GL D+ VGN+L+ MY K GS++D
Sbjct: 320 SYTYVSILNANASAGALEWVKEVHSHAVNAGLAL------DLRVGNALVHMYAKSGSIDD 373
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M ERD SW MI G AQ+G G EA LF +M G P+ T + +L A +
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433
Query: 505 AGLVE-EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
A E K ++E G ++ + + G +D+A+ + + M D + W
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISW 492
Query: 564 GSLLAA 569
+++
Sbjct: 493 NAMMGG 498
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 154/311 (49%), Gaps = 46/311 (14%)
Query: 283 KLRNDLVLGNALVDMYAKCGK--------LNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
+L N + + L+D +CG+ +NEA+ ++ ++ ++++SG
Sbjct: 6 QLLNSPTVSSELID--GQCGRGVISSSFRMNEAQ-------VQRILVGSTLLSG----RQ 52
Query: 335 VKSARLMFT-----------KMLERNVVSWNALIAGYTQNGEN----EEALGLFRLLKRE 379
++ +RL F K L +V NA + G + N ++A+ + ++ ++
Sbjct: 53 MRHSRLYFLSISGCFKSEKHKYLPSVLVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQ 112
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ +++ N+L C D+ L +Q H ++K SG E +++V N L+ +Y++C
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIK------SGMEQNLYVANKLLRVYIRC 166
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGV 498
G ++ ++F+ +++++ W MI G A+ G+ +A+ ++ KM CG+ P+ +T + +
Sbjct: 167 GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ-PNEITYLSI 225
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC ++ G+K + + + G T +V++ + G +++A+ + + M ++
Sbjct: 226 LKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDAQLIFDKM-VER 283
Query: 559 DAVIWGSLLAA 569
+ + W ++
Sbjct: 284 NVISWTVMIGG 294
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 125/311 (40%), Gaps = 85/311 (27%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D++ + +L +C + ++ + VH + + S++ + N L+ +YAKCG + AR VF
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M ++VF+W M+ G AQH R EAL
Sbjct: 784 DDMVERDVFSW-------------------------------TVMIGGLAQHGRGLEALD 812
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
+FVKM SE F + YS+ + L+AC AG VD F TQ + + + +
Sbjct: 813 FFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHY------T 866
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++D+ G+ G + A E+F+ M IEP
Sbjct: 867 CMVDLLGRAGLLEEA--------------------------------ELFILNMP--IEP 892
Query: 251 DEVTLASVVSACASLAAFKEG-LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE--- 306
D+ +++ AC + + RL K + VL L ++YA GK +
Sbjct: 893 DDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVL---LSNIYAATGKWEQKLL 949
Query: 307 ARCVFDRMPIR 317
R + R IR
Sbjct: 950 VRSMMQRKGIR 960
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/708 (33%), Positives = 381/708 (53%), Gaps = 58/708 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F K+ +C K+ + V+ ++ F ++ ++D++ KCG + AR+ F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+++ K+VF WN +++G G A + + M + DQ +WN+++SG+AQ +F
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308
Query: 134 EALGYFV------------------------------------KMHSENFALSEYSFGSA 157
EA YF+ KM E + + SA
Sbjct: 309 EASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASA 368
Query: 158 LSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+SAC + G ++H K SD+ +G++L+D Y KC V ARR F +++ +
Sbjct: 369 VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD 428
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWN+++ Y G +A+E+ M GIEPD +T +V+ K L+
Sbjct: 429 LVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQ 488
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC--VFDRMPIRNVVS-----ETSMVSGY 329
R+ N + AL A CG++ + +RN + ++++S Y
Sbjct: 489 RMHSMGMDPNTTTISGAL----AACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
+ S++ A +F+++ R+VV WN++I+ Q+G + AL L R + +V T
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+ L AC+ LA L+ G++ H +++ GL ++ F+ NSLIDMY +CGS++ RIF
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGL------DTCNFILNSLIDMYGRCGSIQKSRRIF 658
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M +RD VSWN MI +G+G +A+ LF++ G KP+H+T +L ACSH+GL+E
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 718
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EG KYF M E+ + P + Y CMVDLL RAG +E IE MP +P+A +WGSLL A
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C++H N L EY A+ L E+EP +SG YVL++N+Y+ GRW + ++R LM++RGV K P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
GCSWIE+ ++ F+V D HPL ++I ++ L ++K +GYVP+ +
Sbjct: 839 GCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTN 886
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/627 (25%), Positives = 282/627 (44%), Gaps = 114/627 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A +L C + ++ +VHA+++ + F+ +RL++VY + GC+ AR++FDKMS
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NVF+W +I+ M G ++ E + F
Sbjct: 152 ERNVFSWTAIM----------------------------EMYCGLGDYE---ETIKLFYL 180
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E + F AC+ ++++G V+ + + + + +++DM+ KCGR
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR F+ + +++ WN +++ Y G AL+ M SG++PD+VT +++S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A F+E + + + + ++V AL+ + G EA VF +M + V
Sbjct: 301 YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 322 ET----------------------------------------SMVSGYAKASSVKSARLM 341
+ S+V YAK SV+ AR
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP------------THY--- 386
F + + ++VSWNA++AGY G +EEA+ L +K + + P T Y
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480
Query: 387 --------------------TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
T L AC + +L+LG++ H +V+++ + +G
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG----- 535
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
VG++LI MY C S+E C +F + RD V WN++I CAQ+G AL L ++M L
Sbjct: 536 -VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
+ + VTM+ L ACS + +G++ + + GL ++D+ GR G + +
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + + MP Q D V W +++ +H
Sbjct: 654 SRRIFDLMP-QRDLVSWNVMISVYGMH 679
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 181/402 (45%), Gaps = 62/402 (15%)
Query: 250 PDEVT--LASVVSACASLAAFKEGLQIHARLMR-----CEKLRNDLVLGNALVDMYAKCG 302
PDE AS++ C L + G Q+HA+L+ CE LG+ L+++Y + G
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE------FLGSRLLEVYCQTG 138
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
CV D AR MF KM ERNV SW A++ Y
Sbjct: 139 ------CVED-------------------------ARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G+ EE + LF L+ E V P H+ F + AC+ L + ++G+ + +++ G
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF------ 221
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
E + V S++DM++KCG ++ R FE + +D WN M+ G G +AL
Sbjct: 222 EGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISD 281
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M L G KPD VT ++ + +G EE KYF M P +T ++ + G
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341
Query: 543 CLDEAKTLIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV- 598
EA ++ M ++ P+++ S ++AC + G + +++E +S V
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 599 -LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG-CSWIEILG 638
L + YA+ R EV R RK G++KQ SW +L
Sbjct: 402 NSLVDYYAKC-RSVEVAR-----RKFGMIKQTDLVSWNAMLA 437
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 363/635 (57%), Gaps = 69/635 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I K S F+ LID YA CG + AR+ FD ++ K
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACK----------------- 105
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
D SW MV+ +A++DRF ++L F +M F + ++F L A
Sbjct: 106 --------------DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKA 151
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C G F +G VH + K+ Y D+Y+G L+D+Y K G + RVF+ M + +++ W
Sbjct: 152 CIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPW 211
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ +I+ Y Q+ + +A+E+F +M + + P++ T ASV+ +CAS+ + G Q+H +++
Sbjct: 212 SFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLK 271
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L ++ + NAL+D+YAKCG+L+ +S+K
Sbjct: 272 V-GLDGNVFVSNALMDVYAKCGRLD---------------------------NSMK---- 299
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F ++ RN V+WN +I GY Q+G+ ++AL L++ + V + T+ ++L ACA+LA
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++LG Q H+ L + + D+ VGN+LIDMY KCGS+++ +F+ + ERD +SW
Sbjct: 360 MELGTQIHS------LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISW 413
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NAMI G + +G EAL F+ M P+ +T + +L ACS+AGL++ G+ YF SM +
Sbjct: 414 NAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
++G+ P +HYTCMV LLGR+G LD+A LIE +P++P+ +W +LL AC +H ++ LG
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A+++L+I+P + +VLLSN+YA RW V VRK M+ +GV K+PG SWIE G V
Sbjct: 534 MSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIV 593
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ F V D HP K I +L+ L + ++ GYVP+
Sbjct: 594 HYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPD 628
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 248/471 (52%), Gaps = 56/471 (11%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
MP+R+ S+ +++ G+ Q + E + F ++H E L+ + F + L ++
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+HA + K + S+ ++G+ALID Y CG V+ AR+ FD + +++VSW ++ CY +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLV 289
D+L++F M G P+ T A V+ AC L AF G +H +++ C ++ DL
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM--DLY 178
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+G L+D+Y K G N+ VF+ MP +V+ + M+S YA
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYA------------------- 219
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
Q+ ++ EA+ LF ++R V P +TF ++L +CA++ +LQLG+Q H
Sbjct: 220 ------------QSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
HV+K GL + ++FV N+L+D+Y KCG +++ ++F + R+ V+WN MIVG Q
Sbjct: 268 HVLKVGL------DGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQ 321
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G G +AL L+K ML C + VT VL AC+ +E G ++ H L+ LK
Sbjct: 322 SGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELG-------TQIHSLS-LKT 373
Query: 530 HY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y ++D+ + G + A+ L+ M + D + W ++++ +H
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNAR-LVFDMLSERDEISWNAMISGYSMH 423
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/528 (42%), Positives = 336/528 (63%), Gaps = 9/528 (1%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F L ACA G V + K +S+DV++ +A + + G + ARR+FD
Sbjct: 123 TFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDES 182
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTLASVVSACASLAAFKE 270
R++VSWN+LI Y ++G +ALE+F R++ G + PDEVT+ VS CA + +
Sbjct: 183 PARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLEL 242
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G ++H + + +R + L NA++DMY KCG L A+ VF+R+ + VVS T+M+ G+A
Sbjct: 243 GKRLH-EFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHA 301
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
+ ++ AR++F +M ER+V WNAL+AGY QN + +EA+ LF ++ V P T N
Sbjct: 302 RLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVN 361
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL+AC+ L L++G H ++ +H L +LS + +G SL+DMY KCG+++ IF+
Sbjct: 362 LLSACSQLGALEMGMWVHHYIDRHQL-YLS-----VALGTSLVDMYAKCGNIKKAICIFK 415
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ +++ ++W AMI G A +G+ EA+ F++M+ G +PD +T IGVL AC HAGLV+E
Sbjct: 416 EIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKE 475
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
GR++FS M +++ L HY+CM+DLLGRAG LDEA+ L+ MPM PDAV+WG+L AC
Sbjct: 476 GRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFAC 535
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
++H NI LGE A KL+E++PS+SG YVLL+NMYAE + +VR +MR GV K PG
Sbjct: 536 RMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPG 595
Query: 631 CSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
CS IE+ G V+ F+VKDK H IY L +T +MK + + S+
Sbjct: 596 CSCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTANLIDISE 643
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 155/278 (55%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+R+H + + + N ++D+Y KCG L A+ VF+++ NK V +W ++I G +
Sbjct: 244 KRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARL 303
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G ++DA LF MPERD WN++++G+ Q+ + EA+ F +M +E + + L
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLL 363
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SAC+ +MG VH + + + V +G++L+DMY KCG + A +F + ++N +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNAL 423
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+W ++I +G A +A+E F RM+ G++PDE+T V+SAC KEG Q + +
Sbjct: 424 TWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLM 483
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
L + + ++D+ + G L+EA + + MP+
Sbjct: 484 HEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPM 521
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 216/486 (44%), Gaps = 98/486 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL +C R + V + K F++++F+ N + ++ G + AR++F
Sbjct: 120 DHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLF 179
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ ++V +WN++I G ++ G +A LF W + G A
Sbjct: 180 DESPARDVVSWNTLIGGYVRSGLPREALELF----------WRLVEDGKAVRP------- 222
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
E + A+S CA D ++G ++H + V + +A++DMY
Sbjct: 223 ------------DEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYV 270
Query: 198 KCGRVSCARRV-------------------------------FDGMRERNIVSWNSLITC 226
KCG + A+ V FD M ER++ WN+L+
Sbjct: 271 KCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAG 330
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y QN +A+ +F M S ++P+E+T+ +++SAC+ L A + G+ +H + R +L
Sbjct: 331 YVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HQLYL 389
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+ LG +LVDMYAKCG + +A C+F +P +N ++ T+M+ G A
Sbjct: 390 SVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLA---------------- 433
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+G +EA+ F+ + + P TF +L+AC + ++ GRQ
Sbjct: 434 ---------------NHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQ 478
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
+ + H L E + + +ID+ + G +++ ++ TM ++ D V W A+
Sbjct: 479 FFS--LMHEKYHL---ERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFF 533
Query: 466 GCAQNG 471
C +G
Sbjct: 534 ACRMHG 539
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 154/360 (42%), Gaps = 69/360 (19%)
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+S PD +T ++ ACA L G + + + D+ + NA V ++ G +
Sbjct: 114 SSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKL-GFSADVFVVNAGVHFWSVSGSM 172
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
AR +FD P R+VVS +++ GY ++ + A +F +++E
Sbjct: 173 VLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDG--------------- 217
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
++V P T ++ CA + DL+LG++ H V G+R
Sbjct: 218 --------------KAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVR------C 257
Query: 425 DIFVGNSLIDMYMKCGSV-------------------------------EDGCRIFETMV 453
+ + N+++DMY+KCGS+ ED +F+ M
Sbjct: 258 TVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMP 317
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
ERD WNA++ G QN G EA+ LF +M P+ +TM+ +L ACS G +E G
Sbjct: 318 ERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMG-M 376
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ H L T +VD+ + G + +A + + +P +A+ W +++ H
Sbjct: 377 WVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIP-DKNALTWTAMICGLANH 435
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 366 NEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+ L L+R LL S P H TF LL ACA L G HV K G +
Sbjct: 101 DRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGF------SA 154
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+FV N+ + + GS+ R+F+ RD VSWN +I G ++G EAL LF +++
Sbjct: 155 DVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLV 214
Query: 485 LCGE--KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
G+ +PD VTMIG + C+ G +E G++ + + G+ ++D+ + G
Sbjct: 215 EDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSK-GVRCTVRLMNAVMDMYVKCG 273
Query: 543 CLDEAKTLIE 552
L+ AK++ E
Sbjct: 274 SLELAKSVFE 283
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/666 (35%), Positives = 377/666 (56%), Gaps = 46/666 (6%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYG 72
+F+ +P +L+ C KS+ +++ A+++ + F +RL+ A + L
Sbjct: 53 SFVRENPLLSILERC---KSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDY 109
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
++ ++ NVF+WN+ I G ++ G I+ L+ M ++ G + D
Sbjct: 110 CTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRM----------LLGGTLKPDN- 158
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+++ L C G +G V + K + D+++ +A
Sbjct: 159 -------------------HTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNAS 199
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I M CG +S A VF+ R R++V+WNS+IT + G A +A++++ M A + P+E
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T+ ++S+C+ + G + H + + L + L NAL+DMY KCG+L AR +FD
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M + +VS T+MV GYA+ + AR + K+ E++VV WNA+I+G Q + +EAL L
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F ++ ++ P T N L+AC+ L L +G H ++ +H L D+ +G +L
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSI------DVALGTAL 432
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCG++ ++FE + +R+ ++W A+I G A +G +AL F KM+ G PD
Sbjct: 433 VDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDE 492
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +GVL AC H GLVEEGRKYFS MS + ++P HY+CMVDLLGRAG L+EA+ L++
Sbjct: 493 ITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVK 552
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM DA + G+L AC+V+ N+ +GE A KLLEI+P +SG YVLL++MY+E W E
Sbjct: 553 NMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKE 612
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM----K 668
RKLM +GV K PGCS +EI G V+ F+V+D HP ++ IY L LT+++ +
Sbjct: 613 ARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLDVIVR 672
Query: 669 RVGYVP 674
+ GY P
Sbjct: 673 KHGYFP 678
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 171/375 (45%), Gaps = 63/375 (16%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ ++G D+ + LL C S V ++K F +IF+ N I + C
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L A VF+K +++ TWNS+ITG +K G +A +++
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYK------------------ 248
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+M +E +E + +S+C+ D +G + H + + +
Sbjct: 249 -------------EMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP 295
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG---------------- 231
+ +AL+DMY KCG + AR +FD M ++ +VSW +++ Y + G
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 232 ---------------PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+AL +F M IEPD+VT+ + +SAC+ L A G+ IH
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH 415
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ R KL D+ LG ALVDMYAKCG + A VF+ +P RN ++ T+++ G A + +
Sbjct: 416 YIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ 474
Query: 337 SARLMFTKMLERNVV 351
A F+KM+ +V
Sbjct: 475 DALSYFSKMIHIGIV 489
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/620 (38%), Positives = 346/620 (55%), Gaps = 43/620 (6%)
Query: 63 VYAKCGCLYGARKV----FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
V CG L R++ F NVF S+I ++GF A LF MP RD S
Sbjct: 224 VLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN+M+SG Q+ ++AL +M E ++ + S L C D +H +
Sbjct: 284 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K D+++ +ALI+MY K G + AR+ F M ++VSWNS+I YEQN A
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
FV+M +G +PD +TL S+ S A K +H +MR L D+V+GNA+VDMY
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AK G L+ SA +F +L ++V+SWN LI
Sbjct: 464 AKLGLLD-------------------------------SAHKVFEIILVKDVISWNTLIT 492
Query: 359 GYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
GY QNG EA+ ++++++ + + P T+ ++L A A++ LQ G + H V+K L
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLH 552
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
D+FV LID+Y KCG + D +F + + V+WNA+I +G+ + L
Sbjct: 553 L------DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF +ML G KPDHVT + +L ACSH+G VEEG+ F M +E+G+ P HY CMVDL
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDL 665
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG L+ A I+ MP+QPDA IWG+LL AC++H NI LG++ + +L E++ N G Y
Sbjct: 666 LGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYY 725
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSN+YA +G+W V +VR L R+RG+ K PG S IE+ V+VF ++ HP KEIY
Sbjct: 726 VLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIY 785
Query: 658 LVLKMLTREMKRVGYVPNAS 677
L++LT +MK +GY+P+ S
Sbjct: 786 EELRVLTAKMKSLGYIPDYS 805
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 74/451 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C + +S +H +IK ++F+ N LI++YAK G L ARK F +M +
Sbjct: 322 ILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD 381
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WNSII + + Q+D A G+FVKM
Sbjct: 382 VVSWNSII-------------------------------AAYEQNDDPVTAHGFFVKMQL 410
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVS 203
F + S S A S D K VH + + + DV +G+A++DMY K G +
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GIEPDEVTLASVVSA 261
A +VF+ + ++++SWN+LIT Y QNG AS+A+EV+ +MM I P++ T S++ A
Sbjct: 471 SAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPA 529
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + A ++G++IH R+++ L D+ + L+D+Y KCG+L +A +F ++P
Sbjct: 530 YAHVGALQQGMRIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP------ 582
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ + V+WNA+I+ + +G E+ L LF + E V
Sbjct: 583 -------------------------QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 617
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P H TF +LL+AC++ ++ G+ + ++G++ + ++D+ + G
Sbjct: 618 KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK------PSLKHYGCMVDLLGRAGY 671
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+E + M ++ D W A++ C +G
Sbjct: 672 LEMAYGFIKDMPLQPDASIWGALLGACRIHG 702
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 211/451 (46%), Gaps = 51/451 (11%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+HALL + +++ + L+++Y G VS +R FD + ++++ +WNS+I+ Y NG
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 233 ASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+A+ F +++ S I PD T V+ AC +L +G +IH + LG
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRRIHCWAFK---------LG 245
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NV S++ Y++ AR +F M R++
Sbjct: 246 FQW-----------------------NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SWNA+I+G QNG +AL + ++ E + T ++L C L D+ H +V
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+KHGL F D+FV N+LI+MY K G++ED + F+ M D VSWN++I QN
Sbjct: 343 IKHGLEF------DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
A G F KM L G +PD +T++ + + + + R + + L
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA-----KKL 586
+VD+ + G LD A + E + ++ D + W +L+ +N + E + ++
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIILVK-DVISWNTLITGYA--QNGLASEAIEVYKMMEEC 513
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
EI P N G +V + YA +G + +R+
Sbjct: 514 KEIIP-NQGTWVSILPAYAHVGALQQGMRIH 543
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/635 (36%), Positives = 370/635 (58%), Gaps = 42/635 (6%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
+IK F + F+ NR +D+Y++ G + +VF+ + +KN+ +WN + +++G ++ A
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
+F MP+RD SWN+M+SG+ F +A +F +M S +++ + LS + +
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSA 855
Query: 165 VDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
G Q+HA + ++ S+V +G++LI MYGK G V A VF M E +I+SWNSL
Sbjct: 856 C---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSL 912
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I ++G + AL FV M + G PD+ T+++V++ C++L ++G QI A +R
Sbjct: 913 IWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGF 972
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L N +V +A +D+++KC +L ++ VF+
Sbjct: 973 LSNSIV-SSASIDLFSKCNRLEDSVRVFE------------------------------- 1000
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ + + V NA+I+ Y +G E AL LF L RE++ PT +T +L+A + L +
Sbjct: 1001 EIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQ 1060
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G Q H+ VVK GL ESD+ V +SL++MY K G ++ + F + RD +SWN M
Sbjct: 1061 GSQIHSLVVKSGL------ESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTM 1114
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I+G A NG ++AL +FK++L+ G PD +T+ GVL AC+ GLV+EG FSSM KE+G
Sbjct: 1115 IMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYG 1174
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P +HY C+VD++ R G L EA ++E MP +P +IWGSLL AC+++ ++ E VA
Sbjct: 1175 VIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVA 1234
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
++++E+EP +S PY++L+ Y GRW +VRV + M+++GV K GCSWI I HV VF
Sbjct: 1235 ERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVF 1294
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
H K+IY +L++L +E++ GY D
Sbjct: 1295 KENQLLHIGGKDIYFILRLLIQEIEDDGYASQQYD 1329
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/677 (34%), Positives = 367/677 (54%), Gaps = 73/677 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIF-IQNRLIDVYAKCGCLYGARK 75
LD A+ L SC S+ R +H +KS + I NRL+ +Y++C + A++
Sbjct: 4 LDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 76 VFDKMSNKNVFTWNSIITGLLK---------------------W----------GFIDDA 104
+F++M +N F+WN++I G LK W G ++ A
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVA 123
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS---ENFALSEYSFGSALSAC 161
RLF MP ++ +WNSM+ G+A + R EA+G F + E F + + + AC
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN----- 216
G Q+HA + D +GS+L+++YGKCG + A V + M+E +
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 217 --------------------------IVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+V WNS+I+ Y N A +ALE+F M G++
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D T ASV+SAC++L +G+Q+HA + + ND+++ +ALVDMY+KC + ++A +
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKV-GFTNDIIIDSALVDMYSKCRRPDDACKL 362
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F + + + SM++ Y+ + AR +F M ++++SWN++I G++QN EAL
Sbjct: 363 FSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEAL 422
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF + + + ++ +++ACA+++ L+LG Q GL F D +
Sbjct: 423 DLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEF------DQIIST 476
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SL+D Y KCG VE G ++F+ M++ D V WN+M++G A NG+G EAL +F +M G +P
Sbjct: 477 SLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQP 536
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+T +GVL AC H GLVEEGRK+F +M ++ + P +HY+CMVDL RAG L++A L
Sbjct: 537 TDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNL 596
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MP++ D +W S+L C H N +LG+ VAK++++++P NSG YV LS +YA W
Sbjct: 597 IEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDW 656
Query: 611 GEVVRVRKLMRKRGVVK 627
G +VRKLM + + K
Sbjct: 657 GRSAQVRKLMYDKKIPK 673
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 196/413 (47%), Gaps = 13/413 (3%)
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+L K +++ ++G+ +D+Y + G + + RVF+ + ++N++SWN + + + G
Sbjct: 735 MLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELER 794
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
A +VF M + D V+ +++S S F + + + + + + L
Sbjct: 795 ARDVFDEMP----KRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLS 850
Query: 296 DMYAKC-GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ + C GK A + + + + NVV S++ Y K V A +F M E +++SWN
Sbjct: 851 FVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWN 910
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
+LI ++G AL F L++ P +T ++ C+NL DL+ G Q ++
Sbjct: 911 SLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRV 970
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G FLS V ++ ID++ KC +ED R+FE + + D V NAMI A +G+G
Sbjct: 971 G--FLSNS----IVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGE 1024
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
AL LF L +P T+ VL A S V++G + S + K GL + +
Sbjct: 1025 NALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKS-GLESDVIVASSL 1083
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
V++ + G +D A + + D + W +++ + + + K+LL
Sbjct: 1084 VEMYAKFGLIDSAMKTFAKIGAR-DLISWNTMIMGLAYNGRVSKALEIFKELL 1135
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 71/329 (21%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++ D +LA + +C + + G +H ++ L + L +GN L+ MY++C + EA
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 308 RCVFDRMPIRNVVSETSM-------------------------------VSGYAKASSVK 336
+ +F+ MP RN S +M +SG+AK +++
Sbjct: 62 QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLE 121
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR---LLKRESVCPTHYTFGNLLN 393
AR +F +M +N ++WN++I GY NG +EA+GLF+ L E C + ++
Sbjct: 122 VARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVG 181
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC NL L G+Q H +V + F D +G+SL+++Y KCG ++ + M
Sbjct: 182 ACTNLGALDCGKQIHARIVVDEVEF------DSVLGSSLVNLYGKCGDIDSANHVLNLMK 235
Query: 454 ERDWVS-------------------------------WNAMIVGCAQNGYGTEALGLFKK 482
E D S WN+MI G N EAL LF
Sbjct: 236 EPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNN 295
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M G + D+ T VL ACS G++++G
Sbjct: 296 MRRKGVQEDYSTFASVLSACSTLGIIDQG 324
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
V ++H+ ++KS S++ + + L+++YAK G + A K F K+ +++ +WN++I G
Sbjct: 1058 VDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMG 1117
Query: 95 LLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
L G + A +F + P D+ + ++ E L F M E
Sbjct: 1118 LAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKE 1172
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 357/648 (55%), Gaps = 40/648 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR +FD M +NV ++ +++ L+K G + +A L+
Sbjct: 148 AASPFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQ 207
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + + +SGF +++ ALG F KM S + +F + AC G+ +F +
Sbjct: 208 CPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLA 267
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ KS + DV +AL+D+Y +
Sbjct: 268 MSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 327
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +LI +EQ G A++A++++ +M+A G P+ +SV
Sbjct: 328 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 387
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA+L + G +IHAR ++ N V ++L+DMY KC K +A+ +FD +P +N
Sbjct: 388 LSACATLEDLRGGARIHARSLKMGSSTNVFV-SSSLIDMYCKCKKCRDAQTIFDTLPEKN 446
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S+ SGY+ + A +F KM RN+ SWN +I+GY QN + +AL F +
Sbjct: 447 IVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLA 506
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACANL L G+ AH +K G+ E IF+G +L DMY K
Sbjct: 507 SGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGM------EESIFIGTALSDMYAK 560
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M ER+ V+W AMI G A+NG+ E++ L + M+ G P+ T + +
Sbjct: 561 SGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLAL 620
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF M + G++P + HYTCMVD+L RAG L EA+ L+ P +
Sbjct: 621 LFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKS 679
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++N +GE AK+L E+ N+ YVLLSNMYA GRW + R+R
Sbjct: 680 EANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRV 739
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
LM+ + K GCSW+++ G + F + +HPL+ EI +L +L E
Sbjct: 740 LMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWE 787
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 236/496 (47%), Gaps = 78/496 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F ++ +C+ + + IKS F S I +QN LI +Y + G ARKVFD+M
Sbjct: 251 FVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEM 310
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K+V +W +++ + G +D A R+ +MPER++ SW ++++ Q +EA+ +
Sbjct: 311 DVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYS 370
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M ++ + F S LSACA D + G ++HA K S++V++ S+LIDMY KC
Sbjct: 371 QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 430
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PAS-------------- 234
+ A+ +FD + E+NIV WNSL + Y NG PA
Sbjct: 431 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 490
Query: 235 -----DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
DAL F M+ASG P E+T +SV+ ACA+L + G HA+ ++ + +
Sbjct: 491 NRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKL-GMEESIF 549
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+G AL DMYAK G L ++ +F +MP RN V+ T+M+ G A+ + + L+ M+
Sbjct: 550 IGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATG 609
Query: 350 VV----SWNALIAGYTQNGENEEALGLFRLLKRESVCP--THYT---------------- 387
+ ++ AL+ + G E+A+ F ++ + P HYT
Sbjct: 610 MTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAE 669
Query: 388 --------------FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ LL+AC + ++G +A + + G D G L+
Sbjct: 670 ALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELG--------KDNTAGYVLL 721
Query: 434 -DMYMKCGSVEDGCRI 448
+MY CG +D RI
Sbjct: 722 SNMYASCGRWKDAARI 737
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 166/310 (53%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R+HAR +K ++ +F+ + LID+Y KC
Sbjct: 371 QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 430
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
A+ +FD + KN+ WNS+ +G G + +A LF MP R+ SWN+++SG+AQ
Sbjct: 431 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 490
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + E +F S L ACA G HA K +++
Sbjct: 491 NRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFI 550
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++R+F M ERN V+W ++I +NG A +++ + MMA+G+
Sbjct: 551 GTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGM 610
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P+E T +++ AC+ ++ + + M+ + +VD+ A+ G+L EA
Sbjct: 611 TPNEHTFLALLFACSHGGLVEQAIHYFEK-MQAWGISPKEKHYTCMVDVLARAGRLIEAE 669
Query: 309 CVFDRMPIRN 318
+ + P ++
Sbjct: 670 ALLMKTPSKS 679
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 182/434 (41%), Gaps = 61/434 (14%)
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA-- 293
AL + + SG+ D + +++ + AAF AR C++ D V A
Sbjct: 101 ALSLHAHAVRSGVAADTSVASHLLT---TYAAF-------ARAAECDRAFGDCVAAGAAS 150
Query: 294 ------LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+V + K G + AR +FD MP RNVVS T+MV K V A ++ +
Sbjct: 151 PFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPS 210
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+V + A I+G+ +N + ALG+FR + V P TF ++ AC + L
Sbjct: 211 GSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSI 270
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE------------------------ 443
+K ES I V NSLI +Y++ G
Sbjct: 271 VGSAIKSNFF-----ESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVY 325
Query: 444 ------DGC-RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
DG R+ + M ER+ VSW +I Q G EA+ L+ +ML G +P+
Sbjct: 326 SESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFS 385
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+ + G + + S + G + + ++D+ + +A+T+ + +P
Sbjct: 386 SVLSACATLEDLRGGAR-IHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP- 443
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ + V W SL + + ++ Y+ KK+ N + + + YA+ ++ + +R
Sbjct: 444 EKNIVCWNSLASGYSYNGKMVEAMYLFKKM---PARNLASWNTIISGYAQNRQFVDALRS 500
Query: 617 RKLMRKRGVVKQPG 630
M G V PG
Sbjct: 501 FNAMLASGQV--PG 512
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/660 (37%), Positives = 371/660 (56%), Gaps = 53/660 (8%)
Query: 19 SSPFAK-----LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID--VYAKCGCLY 71
SS F K LL +C KS+ +++ +I+++ F N+ + G L+
Sbjct: 27 SSHFTKKSCIFLLKNC---KSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLH 83
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A ++F+ + +F +N +I K G A LF + E
Sbjct: 84 YAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEG---------------- 127
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ +NF Y F C G V + G +V+ + KS D Y+ ++
Sbjct: 128 ----------LSPDNFT---YPFVFKAIGCLGEV--REGEKVYGFVVKSGLEFDTYVCNS 172
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEP 250
L+DMY + GRV R+VF+ M +R++VSWN LI+ Y + DA++VF RM S + P
Sbjct: 173 LMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRP 232
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+E T+ S +SAC +L + G +IH R +R E+L + +GNALVDMY KCG L+ AR +
Sbjct: 233 NEATVVSTLSACIALKMLELGKEIH-RYVR-EQLGFTIKIGNALVDMYCKCGHLSIAREI 290
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F+ MPI+ V+ TSMVSGY + AR +F + R+VV W A+I GY Q ++A+
Sbjct: 291 FNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAV 350
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LFR ++ + V P +T LL CA L L+ G+ H ++ ++ + D VG
Sbjct: 351 ALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMI------DAVVGT 404
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+LI+MY KCG +E IF + E+D SW ++I G A NG ++AL LF +M+ G KP
Sbjct: 405 ALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKP 464
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D +T IGVL ACSH GLVEEGRK+F SM+ + + P +HY C++DLLGRAG LDEA+ L
Sbjct: 465 DDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEEL 524
Query: 551 IEAMPMQPDAVI---WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
IE P + VI +G+LL+AC+ H N+ +GE VAK+L+ IE +S + LL+N+YA
Sbjct: 525 IEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 584
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
RW +V +VR+ M+ GV K PGCS +E+ G V+ F+V D HP +EIY +L + + +
Sbjct: 585 DRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPL 644
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL C + ++ + +H I +++ + + LI++YAKCG + + ++F
Sbjct: 364 DRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIF 423
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+ + K+ +W SII GL G A LFA M
Sbjct: 424 NGLKEKDTASWTSIICGLAMNGKTSKALELFAEM 457
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 346/590 (58%), Gaps = 11/590 (1%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I L G + A +LF ++P+ D + ++++S H +EA+ + +
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
F +A ACA S D +VH ++ SDV++G+ALI YGKC V ARRVFD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+ R++VSW SL +CY + G ++VF M SG++P+ +T++S++ ACA L K
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +IH +R + N L + +ALV +YAKC + EAR VFD MP R+VVS +++ Y
Sbjct: 284 GKEIHGFAVRHGMVVN-LFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342
Query: 331 KASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
K + +F KM V +WNA+I G +NG +EEA+ +FR +++ P
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T ++L AC+ +L++G++ H +V +H + D+ +L+ MY KCG +
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHW------KVGDLTSTTALLYMYAKCGDLNLSR 456
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F+ M +D V+WN MI+ A +G G EAL LF KMLL +P+ VT GVL CSH+
Sbjct: 457 NVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSR 516
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVEEG + F+SM ++H + P +HY+C+VD+ RAG L+EA I+ MPM+P A WG+L
Sbjct: 517 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 576
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LAAC+V++N+ L + AKKL EIEP+N G YV L N+ W E +VR LM++RG+
Sbjct: 577 LAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGIT 636
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K PGCSW+++ V+ F+V DK + + +IY L L +MK GY P+
Sbjct: 637 KTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 686
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 198/398 (49%), Gaps = 19/398 (4%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ +L +C K + + +H ++ +F+ + L+ +YAKC + AR VFD M +
Sbjct: 269 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 328
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFSEALGY 138
++V +WN ++T K + LF M D+ +WN+++ G ++ R EA+
Sbjct: 329 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 388
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F KM F +E + S L AC+ S + +MG ++H + + D+ +AL+ MY K
Sbjct: 389 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 448
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG ++ +R VFD MR +++V+WN++I +G +AL +F +M+ S ++P+ VT V
Sbjct: 449 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 508
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S C+ +EG+QI + R + D + +VD+Y++ G+LNEA MP+
Sbjct: 509 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 568
Query: 319 VVSE-TSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFR 374
S ++++ +V+ A++ K+ E N ++ +L EA +
Sbjct: 569 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 628
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
L+K + T + LQ+G + HT VV
Sbjct: 629 LMKERGITKT-----------PGCSWLQVGNKVHTFVV 655
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 182/412 (44%), Gaps = 74/412 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +C S + VH + S++F+ N LI Y KC C+ GAR
Sbjct: 163 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR--- 219
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
R+F + RD SW S+ S + + + +
Sbjct: 220 ----------------------------RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMD 251
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S L ACA D K G ++H + ++++ SAL+ +Y
Sbjct: 252 VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYA 311
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCY------------------------------ 227
KC V AR VFD M R++VSWN ++T Y
Sbjct: 312 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 371
Query: 228 -----EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+NG + +A+E+F +M G +P+E+T++S++ AC+ + G +IH + R
Sbjct: 372 VIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW 431
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
K+ DL AL+ MYAKCG LN +R VFD M ++VV+ +M+ A + K A +F
Sbjct: 432 KV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLF 490
Query: 343 TKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC---PTHYT 387
KML + N V++ +++G + + EE + +F + R+ + HY+
Sbjct: 491 DKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 542
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 207/444 (46%), Gaps = 77/444 (17%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++G LI + G + AR++FD + + + + ++LI+ +G +++A++++ +
Sbjct: 99 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 158
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
GI+PD + ACA ++H RC + +D+ +GNAL+ Y KC +
Sbjct: 159 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRC-GVMSDVFVGNALIHAYGKCKCVEG 217
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR VFD + +R+VVS TS+ S Y K G+ + G
Sbjct: 218 ARRVFDDLVVRDVVSWTSLSSCYVK--------------------------CGFPRKG-- 249
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+ +FR + V P T ++L ACA L DL+ G++ H V+HG+ ++
Sbjct: 250 ---MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV------NL 300
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS--------------------------- 459
FV ++L+ +Y KC SV + +F+ M RD VS
Sbjct: 301 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 360
Query: 460 --------WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
WNA+I GC +NG EA+ +F+KM G KP+ +T+ +L ACS + + G
Sbjct: 361 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 420
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++ + + + L T ++ + + G L+ ++ + + M + D V W +++ A
Sbjct: 421 KEIHCYVFRHWKVGDLTS-TTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANA 478
Query: 572 VHRNIMLGEYVAKKLL--EIEPSN 593
+H N ++ K+L ++P++
Sbjct: 479 MHGNGKEALFLFDKMLLSRVQPNS 502
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/656 (35%), Positives = 362/656 (55%), Gaps = 71/656 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A ++ +C + V ++H +++S F ++++ LID Y+K G
Sbjct: 154 LASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGN------------ 201
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I++A +F + E+ +W ++++G+ + R + +L F +
Sbjct: 202 -------------------IEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 242
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N Y S LSAC+ + G Q+HA + + DV + + LID Y KC R
Sbjct: 243 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 302
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R++FD M +NI+SW ++I+ Y QN +A+++F M G +PD SV+++
Sbjct: 303 VKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTS 362
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C S A ++G Q+HA ++ L +D + N L+DMYAK L +A+ V
Sbjct: 363 CGSREALEQGRQVHAYTIKA-NLESDEFVKNGLIDMYAKSNLLIDAKKV----------- 410
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F M E+NV+S+NA+I GY+ + EAL LF ++
Sbjct: 411 --------------------FDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQ 450
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +TF L+ A +NLA L+ G+Q H +VK GL F FV N+L+DMY KCGS
Sbjct: 451 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCP------FVTNALVDMYAKCGS 504
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E+ ++F + + RD V WN+MI AQ+G EALG+F++M+ G +P++VT + VL A
Sbjct: 505 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 564
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSHAG VE+G +F+SM G+ P +HY C+V LLGR+G L EAK IE MP++P A+
Sbjct: 565 CSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 623
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W SLL+AC++ N+ LG+Y A+ + +P +SG Y+LLSN++A G W +V +VR M
Sbjct: 624 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 683
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
VVK+PG SWIE+ VNVF+ +D H +I VL +L + +K GYVP+A+
Sbjct: 684 SSEVVKEPGRSWIEVNNKVNVFIARDTTHR-EADIGSVLDILIQHIKGAGYVPDAT 738
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 274/553 (49%), Gaps = 72/553 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL + + + +H +II S S+ F+ N LI+V +K + AR VFDKM
Sbjct: 52 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 111
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+KN+ TW +SMVS ++Q EAL FV
Sbjct: 112 HKNLITW-------------------------------SSMVSMYSQQGYSEEALMVFVD 140
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ ++ +E+ S + AC + G Q+H + +S + DVY+G++LID Y K G
Sbjct: 141 LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNG 200
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR VFD + E+ V+W ++I Y + G ++ +LE+F +M + + PD ++SV+S
Sbjct: 201 NIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLS 260
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ L + G QIHA ++R D+ + N L+D Y KC ++ R +FD+M ++N++
Sbjct: 261 ACSMLEFLEGGKQIHAYVLR-RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNII 319
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S T+M+S GY QN + EA+ LF + R
Sbjct: 320 SWTTMIS-------------------------------GYMQNSFDWEAMKLFGEMNRLG 348
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P + ++L +C + L+ GRQ H + +K L ESD FV N LIDMY K
Sbjct: 349 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANL------ESDEFVKNGLIDMYAKSN 402
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ D ++F+ M E++ +S+NAMI G + +EAL LF +M + +KP+ T ++
Sbjct: 403 LLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALIT 462
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
A S+ + G+++ + + K GL +VD+ + G ++EA+ + + + D
Sbjct: 463 AASNLASLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDV 520
Query: 561 VIWGSLLAACKVH 573
V W S+++ H
Sbjct: 521 VCWNSMISTHAQH 533
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/566 (39%), Positives = 331/566 (58%), Gaps = 38/566 (6%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFS-EALGYFVKMHSENFALSEYSFGSALSACA 162
A L A + + +N+++ G A + S E L + +M S+ Y+ L ACA
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
S + G +VH K +SDVY+ + L+ MY C + AR+VFD +R++VSW +
Sbjct: 137 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 196
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y + G A + + +F M ++ D +TL V+S+CA L + G ++H ++R
Sbjct: 197 MIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNS 256
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+ D+ +GNALVDMY KCG N AR V F
Sbjct: 257 NVNLDVFVGNALVDMYLKCGDANFARKV-------------------------------F 285
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+M +NVVSWN++I+G Q G+ +E+L +FR ++R V P T +LN+CANL L+
Sbjct: 286 QEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 345
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
LG+ H ++ ++ +R +D F+GN+L+DMY KCGS++ C +F+ M +D S+ A
Sbjct: 346 LGKWVHAYLDRNQIR------ADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTA 399
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MIVG A +G G +AL LF +M G +PD VT +GVL ACSH GLVEEGRKYF MS +
Sbjct: 400 MIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIY 459
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
L P +HY CMVDLLGRAG ++EA+ I MP++PDA + G+LL ACK+H + LGE V
Sbjct: 460 NLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESV 519
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
KK+ +IEP G YVL+SN+Y+ RW + +++RK M++R + K PGCS IE+ G ++
Sbjct: 520 MKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHE 579
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMK 668
F DK HP KEIY +L + +K
Sbjct: 580 FQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 252/549 (45%), Gaps = 107/549 (19%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ++ D+ +L +C S++V + VH + IK AS++++ N L+ +YA C
Sbjct: 114 KQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVC 173
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ ARKVFD + P+RD SW +M+ G+
Sbjct: 174 DVIRSARKVFD-------------------------------TSPQRDLVSWTTMIQGYV 202
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDV 186
+ E +G F +M EN + LS+CA D ++G ++H ++ S + DV
Sbjct: 203 KMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDV 262
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++G+AL+DMY KCG + AR+VF M +N+VSWNS+I+ Q G ++L +F +M
Sbjct: 263 FVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++PD+VTL +V+++CA+L + G +HA L R ++R D +GNALVDMYAKCG +++
Sbjct: 323 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDR-NQIRADGFIGNALVDMYAKCGSIDQ 381
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A VF M ++V S T+M+ G A +G+
Sbjct: 382 ACWVFQAMNRKDVYSYTAMIVGLA-------------------------------MHGQG 410
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+AL LF + + + P TF +L AC +H +V+ G ++ + S I
Sbjct: 411 GKALDLFSEMPKMGIEPDEVTFVGVLTAC-----------SHVGLVEEGRKYFE-DMSTI 458
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+ ++ Y GC M+ + G EA + M +
Sbjct: 459 YNLRPQLEHY--------GC----------------MVDLLGRAGLINEAEEFIRNMPI- 493
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD-HYTCMVDLLGRAGCLD 545
+PD + +L AC G VE G S M K + P KD Y M ++ A
Sbjct: 494 --EPDAFVLGALLGACKIHGKVELGE---SVMKKIEKIEPRKDGAYVLMSNIYSSANRWR 548
Query: 546 EAKTLIEAM 554
+A L + M
Sbjct: 549 DALKLRKTM 557
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/625 (37%), Positives = 353/625 (56%), Gaps = 45/625 (7%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+ F +++ L++G + DA R F M RD +WN+M+SG ++ R +EA+G F +M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E A + S L C D + +H K ++++ +A+ID+YGK G +
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
R+VFDGM R++V+WNS+I+ +EQ G + A+E+F M SG+ PD +TL S+ SA A
Sbjct: 223 EVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
G +H ++R D++ GNA+VDMYA
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYA------------------------ 318
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
K S +++A+ MF M R+ VSWN LI GY QNG EA+ ++ + K E +
Sbjct: 319 -------KLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLK 371
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P TF ++L A ++L LQ G + H +K GL D++VG +ID+Y KCG +
Sbjct: 372 PIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNL------DVYVGTCVIDLYAKCGKL 425
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
++ +FE R WNA+I G +G+G +AL LF +M G PDHVT + +L AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SHAGLV++GR +F+ M +G+ P+ HY CMVD+ GRAG LD+A I MP++PD+ I
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
WG+LL AC++H N+ +G+ ++ L E++P N G YVL+SNMYA++G+W V VR L+R+
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKR--HPLNKEIYLVLKMLTREMKRVGYVPNAS--- 677
+ + K PG S IE+ VNVF ++ HP ++EI L L +++ +GYVP+ S
Sbjct: 606 QNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVL 665
Query: 678 --DDEAYEEQNGSNSTSDCQIDFQV 700
+E +EQ +N + I F +
Sbjct: 666 QDVEEDEKEQILNNHSERLAIAFGI 690
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 223/458 (48%), Gaps = 73/458 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L C+ + +H +K E+F+ N +IDVY K G L RKVF
Sbjct: 169 DAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVF 228
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D MS++++ TWNSII+G + G + A +F M RD SG +
Sbjct: 229 DGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGM--RD--------SGVSPD-------- 270
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMY 196
L+ S SA++ C D G VH + + + D+ G+A++DMY
Sbjct: 271 ----------VLTLLSLASAIAQCG---DICGGRSVHCYMVRRGWDVGDIIAGNAIVDMY 317
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTL 255
K ++ A+R+FD M R+ VSWN+LIT Y QNG AS+A+ V+ M G++P + T
Sbjct: 318 AKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTF 377
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
SV+ A + L A ++G ++HA ++ L D+ +G ++D+YAKCGKL+EA +F++ P
Sbjct: 378 VSVLPAYSHLGALQQGTRMHALSIKT-GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R+ WNA+I+G +G +AL LF
Sbjct: 437 -------------------------------RRSTGPWNAVISGVGVHGHGAKALSLFSQ 465
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV-VKHGLRFLSGEESDIFVGNSLID 434
+++E + P H TF +LL AC++ + GR + +G++ ++ + ++D
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYA------CMVD 519
Query: 435 MYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
M+ + G ++D M ++ D W A++ C +G
Sbjct: 520 MFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 52/361 (14%)
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA +R LR D ALV Y + G++ +A FD M R+V + +M+SG +
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCR- 147
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
N EA+GLF + E V T ++L
Sbjct: 148 ------------------------------NARAAEAVGLFGRMVMEGVAGDAVTVSSVL 177
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
C L D L H + VKHGL + ++FV N++ID+Y K G +E+ ++F+ M
Sbjct: 178 PMCVLLGDRALALAMHLYAVKHGL------DDELFVCNAMIDVYGKLGMLEEVRKVFDGM 231
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
RD V+WN++I G Q G A+ +F M G PD +T++ + A + G + GR
Sbjct: 232 SSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGR 291
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL------ 566
M + +VD+ + ++ A+ + ++MP++ DAV W +L
Sbjct: 292 SVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQ 350
Query: 567 --LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
LA+ +H + ++ K ++ G +V + Y+ LG + R+ L K G
Sbjct: 351 NGLASEAIHVYDHMQKHEGLKPIQ------GTFVSVLPAYSHLGALQQGTRMHALSIKTG 404
Query: 625 V 625
+
Sbjct: 405 L 405
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+TF LL A G A H L L G D F +L+ Y++ G V D
Sbjct: 72 FTFPPLLRAAQGP-----GTAAQLHACALRLGLLRG---DAFASGALVHAYLRFGRVRDA 123
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
R F+ M RD +WNAM+ G +N EA+GLF +M++ G D VT+ VL C
Sbjct: 124 YRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLL 183
Query: 506 GLVEEGRKYFSSM---SKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDA 560
G R +M + +HGL + + C M+D+ G+ G L+E + + + M + D
Sbjct: 184 G----DRALALAMHLYAVKHGLD--DELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR-DL 236
Query: 561 VIWGSLLAA 569
V W S+++
Sbjct: 237 VTWNSIISG 245
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/640 (36%), Positives = 362/640 (56%), Gaps = 41/640 (6%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
+R + KSQ ++ + ++L+ + +C +++ +M + N ++ +
Sbjct: 12 SRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFID 71
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGS 156
++AS LF+ +P ++ ++N M+ G +F+ + ++ +M + +++
Sbjct: 72 LKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPF 131
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
ACA + G H+ + KS +D ++ +LI MY +CG + CARRVFD + E++
Sbjct: 132 VFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKD 191
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNS+I+ Y + G A DA+ +F M +G EPDE+TL S++ AC L G I
Sbjct: 192 LVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEG 251
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
++ E N V G+AL+ MY KCG L+ AR VFDRM ++VV+ +M++GYA
Sbjct: 252 FVVENEMDLNSFV-GSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYA------ 304
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
QNG ++EA+ LF ++ V P T +L+ACA
Sbjct: 305 -------------------------QNGVSDEAIILFSGMRESGVNPDKITLVGVLSACA 339
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
++ L G+ T+ + GL ++DI+V +LIDMY KCGS++D R+FE M +++
Sbjct: 340 SIGALDFGKWLDTYASERGL------QNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKN 393
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIGVLCACSHAGLVEEGRKY 514
VSWNAMI A +G E+L LFK+M G +P+ ++ IGVL AC HAGLV+EGR+
Sbjct: 394 EVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQL 453
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F MS GL P +H++CMVDLL RAG + EA IE MP +PD V+ G+LL AC+ R
Sbjct: 454 FDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRR 513
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N+ + E V LLE+EP NSG Y++ S ++A + RW + R+R LMR+RGV K PGCSWI
Sbjct: 514 NVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWI 573
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
EI V+ F D H +++++ V+ +L EMK GY P
Sbjct: 574 EIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEGYGP 613
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 366/649 (56%), Gaps = 40/649 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M ++V ++ +++ L+K G + DA L+
Sbjct: 145 AASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQ 204
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M++GF ++ +ALG F +M S + +E + S + AC G+ +F +
Sbjct: 205 CPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLA 264
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ L KS DV +AL+D+Y +
Sbjct: 265 MSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAE 324
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +L+ +EQ G A +A+ ++ +M+A G P+ +SV
Sbjct: 325 LGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSV 384
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACASL + G +IH + ++ N++ + +AL+DMY KC +L +A+ +F +P +N
Sbjct: 385 LGACASLQDLRSGRKIHNQTLKM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S++SGY+ S + A +F KM RNV SWN++I+GY QN + +AL F +
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACA+L L++G+ H ++K G++ IFVG +L DMY K
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIK------ESIFVGTALSDMYAK 557
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M +R+ V+W AMI G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 558 SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAI 617
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH+GLVE YF M + G++P HYTCMVD+L RAG L EA+ L+ + +
Sbjct: 618 LFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS 676
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++RN +GE AK+L E++ N+ YVLLSNMYA G+W + +R
Sbjct: 677 EANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRI 736
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
LM+ + K GCSW++I G F + +HPL ++Y +L +LT E+
Sbjct: 737 LMKGINLKKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEMLDLLTWEL 785
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 9/303 (2%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R++H + +K ++ +F+ + LID+Y KC
Sbjct: 368 QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK 427
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A+ +F + KN+ WNS+I+G + +A LF MP R+ SWNS++SG+AQ
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + + E +F S L ACA +MG VHA + K +++
Sbjct: 488 NRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFV 547
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++RVF M +RN V+W ++I +NG A +++ +F M+++GI
Sbjct: 548 GTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHA----RLMRCEKLRNDLVLGNALVDMYAKCGKL 304
P+E T +++ AC+ GL HA +M+ + +VD+ A+ G L
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 305 NEA 307
EA
Sbjct: 663 AEA 665
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/657 (35%), Positives = 359/657 (54%), Gaps = 78/657 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ ++ SC+ S+ + VHA+I+ FA+ IF+ L+++YAK G
Sbjct: 166 DKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS-------- 217
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I+D+ +F M E +Q SWN+M+SG + EA
Sbjct: 218 -----------------------IEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFD 254
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FV+M + + Y+ S A VD MG +V S+ +V +G+ALIDMY
Sbjct: 255 LFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYS 314
Query: 198 KCGRVSCARRVFDGMRERNIVS------WNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
KCG + AR VFD N ++ WN++I+ Y Q+G + +ALE++V+M +GI D
Sbjct: 315 KCGSLHDARSVFD----TNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 370
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T SV +A A+ + + G +H +++C + + NA+ D Y+KCG L + R VF
Sbjct: 371 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVF 430
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D +M ER++VSW L+ Y+Q+ EEAL
Sbjct: 431 D-------------------------------RMEERDIVSWTTLVTAYSQSSLGEEALA 459
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
F L++ E P +TF ++L +CA+L L+ GRQ H + K GL +++ + ++
Sbjct: 460 TFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL------DTEKCIESA 513
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
LIDMY KCGS+ + ++F+ + D VSW A+I G AQ+G +AL LF++M L G K +
Sbjct: 514 LIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKAN 573
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT++ VL ACSH G+VEEG YF M +G+ P +HY C++DLLGR G LD+A I
Sbjct: 574 AVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFI 633
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
MPM+P+ ++W +LL C+VH N+ LGE A+K+L I P S YVLLSN Y E G +
Sbjct: 634 RKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYE 693
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+ + +R +M+ +GV K+PG SWI + G V+ F D++HP KEIY+ L+ L ++K
Sbjct: 694 DGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 258/556 (46%), Gaps = 80/556 (14%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+L C S+ + + VH ++KS F + + + N VY+KC A VFD+M
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM-- 127
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
P+R+ SW M+ G +H F + +F +M
Sbjct: 128 -----------------------------PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEM 158
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ ++++ + + +C G ++G VHA + +++ +++ ++L++MY K G +
Sbjct: 159 LNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSI 218
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
+ VF+ M E N VSWN++I+ NG +A ++FVRM P+ TL SV A
Sbjct: 219 EDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAV 278
Query: 263 ASLAAFKEGLQIHARLMRCEK---LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
L G ++ C + ++++G AL+DMY+KCG L++AR VFD I
Sbjct: 279 GKLVDVNMGKEVQ----NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 334
Query: 320 VSE--TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V+ +M+SGY +Q+G ++EAL L+ +
Sbjct: 335 VNTPWNAMISGY-------------------------------SQSGCSQEALELYVQMC 363
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + YT+ ++ NA A LQ GR H V+K GL + + V N++ D Y
Sbjct: 364 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV-----VSVNNAIADAYS 418
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +ED ++F+ M ERD VSW ++ +Q+ G EAL F M G P+ T
Sbjct: 419 KCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSS 478
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL +C+ +E GR+ + K GL K + ++D+ + G + EA + + +
Sbjct: 479 VLISCASLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-N 536
Query: 558 PDAVIWGSLLAACKVH 573
PD V W ++++ H
Sbjct: 537 PDIVSWTAIISGYAQH 552
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDL-VLGNALVDMYAKCGKLNEARCVFDR 313
L V+ CA + +E +H +++ DL VL N +Y+KC + A VFD
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP RN V SW +I G T++G + F
Sbjct: 127 MPQRN-------------------------------VFSWTVMIVGSTEHGLFFDGFKFF 155
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + P + + ++ +C L L+LG+ H +V G + IFV SL+
Sbjct: 156 CEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGF------ATHIFVSTSLL 209
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
+MY K GS+ED +F M E + VSWNAMI GC NG EA LF +M P+
Sbjct: 210 NMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMY 269
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ V A V G++ + + E G+ T ++D+ + G L +A+++ +
Sbjct: 270 TLVSVSKAVGKLVDVNMGKE-VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDT 328
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 359/661 (54%), Gaps = 91/661 (13%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSEALGYFV 140
NVF N+++ + G +++AS +F + +R D SWNS+VS + AL F
Sbjct: 196 NVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFS 255
Query: 141 KM------HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
KM N S + L AC +VH ++ DV++G+ALID
Sbjct: 256 KMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID 315
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP---------------------- 232
Y KCG + A +VF+ M +++VSWN+++ Y Q+G
Sbjct: 316 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 375
Query: 233 -------------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+ +AL +F +M+ SG P+ VT+ SV+SACASL AF +G +IHA +
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435
Query: 280 RCEKLR---------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
+ L DL++ NAL+DMY+KC AR +FD +P+
Sbjct: 436 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE------------- 482
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES--VCPTHYTF 388
ERNVV+W +I G+ Q G++ +AL LF + E V P YT
Sbjct: 483 ----------------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 526
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L ACA+LA +++G+Q H +V++H R+ E S FV N LIDMY KCG V+ +
Sbjct: 527 SCILMACAHLAAIRIGKQIHAYVLRHH-RY---ESSAYFVANCLIDMYSKCGDVDTARHV 582
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F++M ++ +SW +M+ G +G G+EAL +F KM G PD +T + VL ACSH G+V
Sbjct: 583 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 642
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++G YF SMS ++GL P +HY C +DLL R+G LD+A ++ MPM+P AV+W +LL+
Sbjct: 643 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC+VH N+ L E+ KL+E+ N G Y L+SN+YA GRW +V R+R LM+K G+ K+
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 762
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASDDEAYEEQ 685
PGCSW++ F V D+ HPL+ +IY +L+ L +K +GYVP A D EE+
Sbjct: 763 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEK 822
Query: 686 N 686
N
Sbjct: 823 N 823
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 292/596 (48%), Gaps = 78/596 (13%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKS---------------QFASEIFIQNR----- 59
S FA LL C KS + ++H +II S SE FI R
Sbjct: 45 SHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTG 101
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
++ Y CG A V ++++ WN +I +K G +D A + C
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINV--------SCR- 152
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
M+ + D F+ L AC ++ G+ H L+
Sbjct: 153 --MLRAGTRPDHFT--------------------LPHVLKACGELPSYRCGSAFHGLICC 190
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDA 236
+ + S+V++ +AL+ MY +CG + A +FD + +R +++SWNS+++ + ++ A A
Sbjct: 191 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 250
Query: 237 LEVFVRMM------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
L++F +M + D +++ +++ AC SL A + ++H +R D+ +
Sbjct: 251 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP-DVFV 309
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN- 349
GNAL+D YAKCG + A VF+ M ++VVS +MV+GY+++ + ++A +F M + N
Sbjct: 310 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 369
Query: 350 ---VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
VV+W A+IAGY+Q G + EAL LFR + P T ++L+ACA+L G +
Sbjct: 370 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 429
Query: 407 AHTHVVKHGLRFLS----GEESDIFVGNSLIDMYMKCGSVEDGCRIFE--TMVERDWVSW 460
H + +K+ L L GE+ D+ V N+LIDMY KC S + IF+ + ER+ V+W
Sbjct: 430 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 489
Query: 461 NAMIVGCAQNGYGTEALGLFKKML--LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
MI G AQ G +AL LF +M+ G P+ T+ +L AC+H + G++ + +
Sbjct: 490 TVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 549
Query: 519 SKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ H C++D+ + G +D A+ + ++M Q A+ W S++ +H
Sbjct: 550 LRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 604
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 230/470 (48%), Gaps = 68/470 (14%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+L +C K+V T+ VH I++ ++F+ N LID YAKCG + A KVF+ M K
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 336
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYF 139
+V +WN+++ G + G + A LF +M + D +W ++++G++Q EAL F
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS----------RYSSDVYMG 189
+M + + S LSACA F GT++HA K+ D+ +
Sbjct: 397 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 456
Query: 190 SALIDMYGKCGRVSCARRVFDG--MRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS- 246
+ALIDMY KC AR +FD + ERN+V+W +I + Q G ++DAL++FV M++
Sbjct: 457 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 516
Query: 247 -GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND-LVLGNALVDMYAKCGKL 304
G+ P+ T++ ++ ACA LAA + G QIHA ++R + + + N L+DMY+KCG +
Sbjct: 517 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 576
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+ AR VFD M ++ +S TSM++GY +G
Sbjct: 577 DTARHVFDSMSQKSAISWTSMMTGYG-------------------------------MHG 605
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
EAL +F +++ P TF +L AC +H +V GL + +
Sbjct: 606 RGSEALDIFDKMRKAGFVPDDITFLVVLYAC-----------SHCGMVDQGLSYFDSMSA 654
Query: 425 DIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
D + ID+ + G ++ R + M +E V W A++ C
Sbjct: 655 DYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 704
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 173/375 (46%), Gaps = 47/375 (12%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-------QFASE---IFIQNRLIDVYAKCGCLYGAR 74
+L +C + S +HA +K+ F E + + N LID+Y+KC AR
Sbjct: 414 VLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 473
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD + + ER+ +W M+ G AQ+ ++
Sbjct: 474 SIFDDIP-----------------------------LEERNVVTWTVMIGGHAQYGDSND 504
Query: 135 ALGYFVKMHSENFALSE--YSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVY-MGS 190
AL FV+M SE + ++ Y+ L ACA ++G Q+HA +L RY S Y + +
Sbjct: 505 ALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVAN 564
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
LIDMY KCG V AR VFD M +++ +SW S++T Y +G S+AL++F +M +G P
Sbjct: 565 CLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 624
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D++T V+ AC+ +GL + L +D+ A+ G+L++A
Sbjct: 625 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRT 684
Query: 311 FDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV---SWNALIAGYTQNGEN 366
MP+ V +++S S+V+ A K++E N S+ + Y G
Sbjct: 685 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 744
Query: 367 EEALGLFRLLKRESV 381
++ + L+K+ +
Sbjct: 745 KDVARIRHLMKKSGI 759
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 359/661 (54%), Gaps = 91/661 (13%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSEALGYFV 140
NVF N+++ + G +++AS +F + +R D SWNS+VS + AL F
Sbjct: 189 NVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFS 248
Query: 141 KM------HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
KM N S + L AC +VH ++ DV++G+ALID
Sbjct: 249 KMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID 308
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP---------------------- 232
Y KCG + A +VF+ M +++VSWN+++ Y Q+G
Sbjct: 309 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 368
Query: 233 -------------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+ +AL +F +M+ SG P+ VT+ SV+SACASL AF +G +IHA +
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428
Query: 280 RCEKLR---------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
+ L DL++ NAL+DMY+KC AR +FD +P+
Sbjct: 429 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE------------- 475
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES--VCPTHYTF 388
ERNVV+W +I G+ Q G++ +AL LF + E V P YT
Sbjct: 476 ----------------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 519
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L ACA+LA +++G+Q H +V++H R+ E S FV N LIDMY KCG V+ +
Sbjct: 520 SCILMACAHLAAIRIGKQIHAYVLRHH-RY---ESSAYFVANCLIDMYSKCGDVDTARHV 575
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F++M ++ +SW +M+ G +G G+EAL +F KM G PD +T + VL ACSH G+V
Sbjct: 576 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 635
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++G YF SMS ++GL P +HY C +DLL R+G LD+A ++ MPM+P AV+W +LL+
Sbjct: 636 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC+VH N+ L E+ KL+E+ N G Y L+SN+YA GRW +V R+R LM+K G+ K+
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 755
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASDDEAYEEQ 685
PGCSW++ F V D+ HPL+ +IY +L+ L +K +GYVP A D EE+
Sbjct: 756 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEK 815
Query: 686 N 686
N
Sbjct: 816 N 816
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 292/596 (48%), Gaps = 78/596 (13%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKS---------------QFASEIFIQNR----- 59
S FA LL C KS + ++H +II S SE FI R
Sbjct: 38 SHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTG 94
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
++ Y CG A V ++++ WN +I +K G +D A + C
Sbjct: 95 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINV--------SCR- 145
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
M+ + D F+ L AC ++ G+ H L+
Sbjct: 146 --MLRAGTRPDHFT--------------------LPHVLKACGELPSYRCGSAFHGLICC 183
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDA 236
+ + S+V++ +AL+ MY +CG + A +FD + +R +++SWNS+++ + ++ A A
Sbjct: 184 NGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA 243
Query: 237 LEVFVRMM------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
L++F +M + D +++ +++ AC SL A + ++H +R D+ +
Sbjct: 244 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFP-DVFV 302
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN- 349
GNAL+D YAKCG + A VF+ M ++VVS +MV+GY+++ + ++A +F M + N
Sbjct: 303 GNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENI 362
Query: 350 ---VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
VV+W A+IAGY+Q G + EAL LFR + P T ++L+ACA+L G +
Sbjct: 363 PLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE 422
Query: 407 AHTHVVKHGLRFLS----GEESDIFVGNSLIDMYMKCGSVEDGCRIFE--TMVERDWVSW 460
H + +K+ L L GE+ D+ V N+LIDMY KC S + IF+ + ER+ V+W
Sbjct: 423 IHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTW 482
Query: 461 NAMIVGCAQNGYGTEALGLFKKML--LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
MI G AQ G +AL LF +M+ G P+ T+ +L AC+H + G++ + +
Sbjct: 483 TVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV 542
Query: 519 SKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ H C++D+ + G +D A+ + ++M Q A+ W S++ +H
Sbjct: 543 LRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 597
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 230/470 (48%), Gaps = 68/470 (14%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+L +C K+V T+ VH I++ ++F+ N LID YAKCG + A KVF+ M K
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYF 139
+V +WN+++ G + G + A LF +M + D +W ++++G++Q EAL F
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS----------RYSSDVYMG 189
+M + + S LSACA F GT++HA K+ D+ +
Sbjct: 390 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 449
Query: 190 SALIDMYGKCGRVSCARRVFDG--MRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS- 246
+ALIDMY KC AR +FD + ERN+V+W +I + Q G ++DAL++FV M++
Sbjct: 450 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 509
Query: 247 -GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND-LVLGNALVDMYAKCGKL 304
G+ P+ T++ ++ ACA LAA + G QIHA ++R + + + N L+DMY+KCG +
Sbjct: 510 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 569
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+ AR VFD M ++ +S TSM++GY +G
Sbjct: 570 DTARHVFDSMSQKSAISWTSMMTGYG-------------------------------MHG 598
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
EAL +F +++ P TF +L AC +H +V GL + +
Sbjct: 599 RGSEALDIFDKMRKAGFVPDDITFLVVLYAC-----------SHCGMVDQGLSYFDSMSA 647
Query: 425 DIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
D + ID+ + G ++ R + M +E V W A++ C
Sbjct: 648 DYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC 697
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 173/375 (46%), Gaps = 47/375 (12%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-------QFASE---IFIQNRLIDVYAKCGCLYGAR 74
+L +C + S +HA +K+ F E + + N LID+Y+KC AR
Sbjct: 407 VLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 466
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD + + ER+ +W M+ G AQ+ ++
Sbjct: 467 SIFDDIP-----------------------------LEERNVVTWTVMIGGHAQYGDSND 497
Query: 135 ALGYFVKMHSENFALSE--YSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVY-MGS 190
AL FV+M SE + ++ Y+ L ACA ++G Q+HA +L RY S Y + +
Sbjct: 498 ALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVAN 557
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
LIDMY KCG V AR VFD M +++ +SW S++T Y +G S+AL++F +M +G P
Sbjct: 558 CLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 617
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D++T V+ AC+ +GL + L +D+ A+ G+L++A
Sbjct: 618 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRT 677
Query: 311 FDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV---SWNALIAGYTQNGEN 366
MP+ V +++S S+V+ A K++E N S+ + Y G
Sbjct: 678 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 737
Query: 367 EEALGLFRLLKRESV 381
++ + L+K+ +
Sbjct: 738 KDVARIRHLMKKSGI 752
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 241/620 (38%), Positives = 345/620 (55%), Gaps = 43/620 (6%)
Query: 63 VYAKCGCLYGARKV----FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
V CG L RK+ F NVF S+I ++GF A LF MP RD S
Sbjct: 224 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN+M+SG Q+ ++AL +M E ++ + S L C D +H +
Sbjct: 284 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K D+++ +ALI+MY K G + AR+ F M ++VSWNS+I YEQN A
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHG 403
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
FV+M +G +PD +TL S+ S A K +H +MR L D+V+GNA+VDMY
Sbjct: 404 FFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMY 463
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AK G L+ SA +F + ++V+SWN LI
Sbjct: 464 AKLGLLD-------------------------------SAHKVFEIIPVKDVISWNTLIT 492
Query: 359 GYTQNGENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
GY QNG EA+ ++++++ + + P T+ ++L A A++ LQ G + H V+K L
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 552
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
D+FV LID+Y KCG + D +F + + V+WNA+I +G+ + L
Sbjct: 553 L------DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF +ML G KPDHVT + +L ACSH+G VEEG+ F M +E+G+ P HY CMVDL
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDL 665
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG L+ A I+ MP+QPDA IWG+LL AC++H NI LG++ + +L E++ N G Y
Sbjct: 666 LGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYY 725
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSN+YA +G+W V +VR L R+RG+ K PG S IE+ V+VF ++ HP KEIY
Sbjct: 726 VLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIY 785
Query: 658 LVLKMLTREMKRVGYVPNAS 677
L++LT +MK +GY+P+ S
Sbjct: 786 EELRVLTAKMKSLGYIPDYS 805
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 74/451 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C + +S +H +IK ++F+ N LI++YAK G L ARK F +M +
Sbjct: 322 ILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD 381
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WNSII + + Q+D A G+FVKM
Sbjct: 382 VVSWNSII-------------------------------AAYEQNDDPVTAHGFFVKMQL 410
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVS 203
F + S S A S D K VH + + + DV +G+A++DMY K G +
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLD 470
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GIEPDEVTLASVVSA 261
A +VF+ + ++++SWN+LIT Y QNG AS+A+EV+ +MM I P++ T S++ A
Sbjct: 471 SAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPA 529
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + A ++G++IH R+++ L D+ + L+D+Y KCG+L +A +F ++P
Sbjct: 530 YAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP------ 582
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ + V+WNA+I+ + +G E+ L LF + E V
Sbjct: 583 -------------------------QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGV 617
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P H TF +LL+AC++ ++ G+ + ++G++ + ++D+ + G
Sbjct: 618 KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIK------PSLKHYGCMVDLLGRAGY 671
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+E + M ++ D W A++ C +G
Sbjct: 672 LEMAYDFIKDMPLQPDASIWGALLGACRIHG 702
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 208/442 (47%), Gaps = 51/442 (11%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+HALL + +++ + L+++Y G VS +R FD + ++++ +WNS+I+ Y NG
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 233 ASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+A+ F +++ S I PD T V+ AC +L +G +IH + LG
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV---DGRKIHCWAFK---------LG 245
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NV S++ Y++ AR +F M R++
Sbjct: 246 FQW-----------------------NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SWNA+I+G QNG +AL + ++ E + T ++L C L D+ H +V
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+KHGL F D+FV N+LI+MY K G++ED + F+ M D VSWN++I QN
Sbjct: 343 IKHGLEF------DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
A G F KM L G +PD +T++ + + + + R + + L
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA-----KKL 586
+VD+ + G LD A + E +P++ D + W +L+ +N + E + ++
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYA--QNGLASEAIEVYKMMEEC 513
Query: 587 LEIEPSNSGPYVLLSNMYAELG 608
EI P N G +V + YA +G
Sbjct: 514 KEIIP-NQGTWVSILPAYAHVG 534
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 346/590 (58%), Gaps = 11/590 (1%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I L G + A +LF ++P+ D + ++++S H +EA+ + +
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
F +A ACA S D +VH ++ SDV++G+ALI YGKC V ARRVFD
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+ R++VSW SL +CY + G ++VF M SG++P+ +T++S++ ACA L K
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +IH +R + N L + +ALV +YAKC + EAR VFD MP R+VVS +++ Y
Sbjct: 198 GKEIHGFAVRHGMVVN-LFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256
Query: 331 KASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
K + +F KM V +WNA+I G +NG +EEA+ +FR +++ P
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T ++L AC+ +L++G++ H +V +H + D+ +L+ MY KCG +
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHW------KVGDLTSTTALLYMYAKCGDLNLSR 370
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F+ M +D V+WN MI+ A +G G EAL LF KMLL +P+ VT GVL CSH+
Sbjct: 371 NVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSR 430
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVEEG + F+SM ++H + P +HY+C+VD+ RAG L+EA I+ MPM+P A WG+L
Sbjct: 431 LVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGAL 490
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LAAC+V++N+ L + AKKL EIEP+N G YV L N+ W E +VR LM++RG+
Sbjct: 491 LAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGIT 550
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K PGCSW+++ V+ F+V DK + + +IY L L +MK GY P+
Sbjct: 551 KTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDT 600
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 198/398 (49%), Gaps = 19/398 (4%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ +L +C K + + +H ++ +F+ + L+ +YAKC + AR VFD M +
Sbjct: 183 SSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH 242
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGY 138
++V +WN ++T K + LF M D+ +WN+++ G ++ R EA+
Sbjct: 243 RDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEM 302
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F KM F +E + S L AC+ S + +MG ++H + + D+ +AL+ MY K
Sbjct: 303 FRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 362
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG ++ +R VFD MR +++V+WN++I +G +AL +F +M+ S ++P+ VT V
Sbjct: 363 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 422
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S C+ +EG+QI + R + D + +VD+Y++ G+LNEA MP+
Sbjct: 423 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 482
Query: 319 VVSE-TSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFR 374
S ++++ +V+ A++ K+ E N ++ +L EA +
Sbjct: 483 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 542
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
L+K + T + LQ+G + HT VV
Sbjct: 543 LMKERGITKT-----------PGCSWLQVGNKVHTFVV 569
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 182/412 (44%), Gaps = 74/412 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +C S + VH + S++F+ N LI Y KC C+ GAR
Sbjct: 77 DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR--- 133
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
R+F + RD SW S+ S + + + +
Sbjct: 134 ----------------------------RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMD 165
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S L ACA D K G ++H + ++++ SAL+ +Y
Sbjct: 166 VFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYA 225
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCY------------------------------ 227
KC V AR VFD M R++VSWN ++T Y
Sbjct: 226 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 285
Query: 228 -----EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+NG + +A+E+F +M G +P+E+T++S++ AC+ + G +IH + R
Sbjct: 286 VIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW 345
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
K+ DL AL+ MYAKCG LN +R VFD M ++VV+ +M+ A + K A +F
Sbjct: 346 KV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLF 404
Query: 343 TKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC---PTHYT 387
KML + N V++ +++G + + EE + +F + R+ + HY+
Sbjct: 405 DKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYS 456
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 207/444 (46%), Gaps = 77/444 (17%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++G LI + G + AR++FD + + + + ++LI+ +G +++A++++ +
Sbjct: 13 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
GI+PD + ACA ++H RC + +D+ +GNAL+ Y KC +
Sbjct: 73 GIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRC-GVMSDVFVGNALIHAYGKCKCVEG 131
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR VFD + +R+VVS TS+ S Y K G+ + G
Sbjct: 132 ARRVFDDLVVRDVVSWTSLSSCYVK--------------------------CGFPRKG-- 163
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+ +FR + V P T ++L ACA L DL+ G++ H V+HG+ ++
Sbjct: 164 ---MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV------NL 214
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS--------------------------- 459
FV ++L+ +Y KC SV + +F+ M RD VS
Sbjct: 215 FVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRD 274
Query: 460 --------WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
WNA+I GC +NG EA+ +F+KM G KP+ +T+ +L ACS + + G
Sbjct: 275 GVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMG 334
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++ + + + L T ++ + + G L+ ++ + + M + D V W +++ A
Sbjct: 335 KEIHCYVFRHWKVGDLTS-TTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANA 392
Query: 572 VHRNIMLGEYVAKKLL--EIEPSN 593
+H N ++ K+L ++P++
Sbjct: 393 MHGNGKEALFLFDKMLLSRVQPNS 416
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/653 (34%), Positives = 365/653 (55%), Gaps = 70/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C V + VH +IKS FA ++ + + + +YAKC
Sbjct: 297 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC---------- 346
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
NVF +DA +LF MPERD SWN+++S + Q + +AL
Sbjct: 347 ------NVF---------------EDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALE 385
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M F + + +S+CA +D + G ++H L +S ++ D ++ SAL+DMYG
Sbjct: 386 LFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYG 445
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A+ VF+ ++ +N+VSWNS+I Y G + +E+F RM GI P TL+S
Sbjct: 446 KCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSS 505
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ + G IH ++R ++ D+ + ++L+D+Y KCG
Sbjct: 506 ILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCG--------------- 549
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ SA +F M + NVVSWN +I+GY + G EAL +F ++
Sbjct: 550 ----------------NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 593
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V P TF ++L AC+ LA L+ G++ H +++ L E +++ +G +L+DMY
Sbjct: 594 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL-----EINEVVMG-ALLDMYA 647
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+V++ IF + ERD+VSW +MI +G EAL LF+KM KPD VT +
Sbjct: 648 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP-M 556
+L ACSHAGLV+EG YF+ M E+G P +HY+C++DLLGR G L EA +++ P +
Sbjct: 708 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 767
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D + +L +AC +H+ + LGE + + L+E +P + Y++LSNMYA + +W EV +V
Sbjct: 768 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKV 827
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R +++ G+ K PGCSWIE+ ++ F+V+DK HP IY + +L +++
Sbjct: 828 RLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 880
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 275/560 (49%), Gaps = 76/560 (13%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +H +I+ + I + LI++Y C A+ VF + N
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP--------------- 259
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEYSFGSA 157
D WN +++ ++ F E L F ++ H +++ S
Sbjct: 260 ---------------LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSV 304
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L AC+G G VH + KS ++ DV + S+ + MY KC A ++FD M ER++
Sbjct: 305 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDV 364
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
SWN++I+CY Q+G ALE+F M SG +PD VTL +V+S+CA L + G +IH
Sbjct: 365 ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHME 424
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
L+R D + +ALVDMY KCG L A+ VF+++ +NVVS SM++G
Sbjct: 425 LVR-SGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG--------- 474
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
Y+ G+++ + LFR + E + PT T ++L AC+
Sbjct: 475 ----------------------YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 512
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
+LQLG+ H +++++ + E+DIFV +SLID+Y KCG++ +F+ M + +
Sbjct: 513 SVNLQLGKFIHGYIIRNRV------EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNV 566
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSWN MI G + G EAL +F M G KPD +T VL ACS ++E+G++ +
Sbjct: 567 VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKE-IHN 625
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
E L + ++D+ + G +DEA + +P + D V W S++AA H
Sbjct: 626 FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQ-- 682
Query: 578 LGEYVAKKLLE-IEPSNSGP 596
+ A KL E ++ S++ P
Sbjct: 683 --AFEALKLFEKMQQSDAKP 700
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 14/306 (4%)
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + EG I R++ + + G+AL ++ GKL + V + N+ S
Sbjct: 180 LNHYTEGEGIWYRVLARNRCLARVTAGSALEEL---LGKLIHQKIVSLGLQ-NNITLCKS 235
Query: 325 MVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
+++ Y +SA+L+F + ++ WN L+A T+N E L +F RLL +
Sbjct: 236 LINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLK 295
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P +T+ ++L AC+ L + G+ HTHV+K G D+ V +S + MY KC
Sbjct: 296 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM------DVVVMSSAVGMYAKCNVF 349
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
ED ++F+ M ERD SWN +I Q+G +AL LF++M + G KPD VT+ V+ +C
Sbjct: 350 EDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 409
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ +E G++ + + G A + +VD+ G+ GCL+ AK + E + + + V
Sbjct: 410 ARLLDLERGKEIHMELVRS-GFALDGFVSSALVDMYGKCGCLEMAKEVFEQI-QRKNVVS 467
Query: 563 WGSLLA 568
W S++A
Sbjct: 468 WNSMIA 473
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/593 (40%), Positives = 333/593 (56%), Gaps = 40/593 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF +S++ K G + +A LF MPER+ SW +M+SG+A + EA F M
Sbjct: 150 DVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMR 209
Query: 144 SENFALSE--YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
E +E + F S LSA + G QVH+L K+ V + +AL+ MY KCG
Sbjct: 210 HEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGS 269
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A + F+ +N ++W++++T + Q G + AL++F M SG P E TL V++A
Sbjct: 270 LEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINA 329
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ A EG Q+H ++ VL +ALVDMYAKCG
Sbjct: 330 CSDACAIVEGRQMHGYSLKLGYELQLYVL-SALVDMYAKCG------------------- 369
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S+ AR F + + +VV W ++I GY QNG+ E AL L+ ++ V
Sbjct: 370 ------------SIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGV 417
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T ++L AC+NLA L G+Q H ++K+ +I +G++L MY KCGS
Sbjct: 418 IPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSL------EIPIGSALSAMYAKCGS 471
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++DG RIF M RD +SWNAMI G +QNG G E L LF+KM L G KPD+VT + +L A
Sbjct: 472 LDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSA 531
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+ G YF M E +AP +HY CMVD+L RAG L EAK IE+ +
Sbjct: 532 CSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLC 591
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W LLAA K HR+ LG Y +KL+E+ S YVLLS++Y LG+W +V RVR +M+
Sbjct: 592 LWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMK 651
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RGV K+PGCSWIE+ +VF+V D HP EI L LK+LT+ MK GY P
Sbjct: 652 ARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQP 704
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 261/559 (46%), Gaps = 90/559 (16%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+ L C R K + R +HARI+ + S I N LI++YAKC A VFD ++NK
Sbjct: 15 RALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNK 74
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF---- 139
D SWN +++ F+Q + +L
Sbjct: 75 -------------------------------DVVSWNCLINAFSQQQAHAPSLHVMHLFR 103
Query: 140 -VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ M + + ++ +A + D + G Q HAL K+ S DV+ S+L++MY K
Sbjct: 104 QLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCK 163
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF--VRMMASGIEPDEVTLA 256
G V AR +FD M ERN VSW ++I+ Y A +A E+F +R G +E
Sbjct: 164 TGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFT 223
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLV----LGNALVDMYAKCGKLNEARCVFD 312
SV+SA G Q+H+ M +N LV + NALV MY KCG L +A F+
Sbjct: 224 SVLSALTCYMLVNTGRQVHSLAM-----KNGLVCIVSVANALVTMYVKCGSLEDALKTFE 278
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+N ++ ++MV+G+A Q G++++AL L
Sbjct: 279 LSGNKNSITWSAMVTGFA-------------------------------QFGDSDKALKL 307
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + + P+ +T ++NAC++ + GRQ H + +K G E ++V ++L
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGY------ELQLYVLSAL 361
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCGS+ D + FE + + D V W ++I G QNG AL L+ KM L G P+
Sbjct: 362 VDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPND 421
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL--APLKDHYTCMVDLLGRAGCLDEAKTL 550
+TM VL ACS+ +++G++ + + K + P+ + M + G LD+ +
Sbjct: 422 LTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMY---AKCGSLDDGYRI 478
Query: 551 IEAMPMQPDAVIWGSLLAA 569
MP + D + W ++++
Sbjct: 479 FWRMPAR-DVISWNAMISG 496
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/579 (39%), Positives = 347/579 (59%), Gaps = 7/579 (1%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A R+F +P+ ++ +NS++ G++ D +A+ F +M + +E++ L
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC + VH L K S V++ +ALI +Y CG + CAR++FD + ++ +V
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWNS+I Y G +A +F +M G+EPD T +++S C+ G +H
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHF-C 214
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ ++ D+++ NALVDMYAKCG L+ A+ +FDR +NVVS TSM+S YA+ S++ A
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 274
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F +M +NVVSWN++I+ Y + G+ EAL LF ++ V P T ++L AC+ L
Sbjct: 275 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQL 334
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
DL +G++ H +++ + + + + NSLIDMY KCG V IF M ++ V
Sbjct: 335 GDLVMGKKIHNYILSNKGAY------GVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLV 388
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN +I A +G G EA+ LF++M G PD +T+ G+L ACSH+GLV+ G YF M
Sbjct: 389 SWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRM 448
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ + +HY CMVDLLGR G L EA LI MPM+PD V+WG+LL AC++H N+ +
Sbjct: 449 GVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEI 508
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ + K+LLE+EP + G YVL+SN+Y E RW +V ++RKLM RG+ K S IEI G
Sbjct: 509 GKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDG 568
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ FMV DKRH ++ IY +L LT ++ GY+ N S
Sbjct: 569 CIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLCNIS 607
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 180/331 (54%), Gaps = 1/331 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL C +S+ + R VH I + +I ++N L+D+YAKCG L+ A+ +F
Sbjct: 188 DGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIF 247
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ KNV +W S+I+ + G I+ A ++F MP ++ SWNSM+S + + ++ EAL
Sbjct: 248 DRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALD 307
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM + E + S L+AC+ D MG ++H + ++ + V + ++LIDMY
Sbjct: 308 LFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYA 367
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A +F M +N+VSWN +I +G +A+++F M A G PDE+TL
Sbjct: 368 KCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTG 427
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC+ GL R+ ++ ++ +VD+ + G L EA + RMP++
Sbjct: 428 LLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMK 487
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+VV +++ +V+ + + ++LE
Sbjct: 488 PDVVVWGALLGACRIHGNVEIGKQILKQLLE 518
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 220/529 (41%), Gaps = 135/529 (25%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L +C + + VH IK S +F+QN LI VY CG ++ ARK+FD +
Sbjct: 92 PF--VLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDI 149
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++K + +WNS M+ G+A + EA F
Sbjct: 150 TDKTLVSWNS-------------------------------MIGGYAHMGNWKEAFLLFR 178
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM ++F + LS C+ S D +G VH + + D+ + +AL+DMY KCG
Sbjct: 179 KMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCG 238
Query: 201 R-------------------------------VSCARRVFDGMRERNIVSWNSLITCYEQ 229
+ AR++FD M +N+VSWNS+I+CY +
Sbjct: 239 NLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLR 298
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL++F +M S + PDE TL S+++AC+ L G +IH ++ K +
Sbjct: 299 EGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILS-NKGAYGVT 357
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N+L+DMYAKCG + A +F MP +N
Sbjct: 358 LYNSLIDMYAKCGPVVTALDIFLEMP-------------------------------GKN 386
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
+VSWN +I +G EA+ LF ++ + P T LL+AC +H+
Sbjct: 387 LVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSAC-----------SHS 435
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+V GL + + G + V R+ + M+ +
Sbjct: 436 GLVDMGLYYFD-----------------RMGVI--------YRVPREIEHYACMVDLLGR 470
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
G EA+ L +M + KPD V +L AC G VE G++ +
Sbjct: 471 GGLLGEAIELIGRMPM---KPDVVVWGALLGACRIHGNVEIGKQILKQL 516
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 15/297 (5%)
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
A ++ A+ MF ++ + N +N+LI GY+ + + +A+ LFR + + P +T +
Sbjct: 35 AGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFV 94
Query: 392 LNACANLADLQLGRQAHTH-VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L AC + A+ V+ HGL G S +FV N+LI +Y+ CG + ++F+
Sbjct: 95 LKACG-------CKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFD 147
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ ++ VSWN+MI G A G EA LF+KM G +PD T + +L CS + ++
Sbjct: 148 DITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDL 207
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
GR Y + G+ +VD+ + G L A+ + + + + V W S+++A
Sbjct: 208 GR-YVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDR-TQEKNVVSWTSMISAY 265
Query: 571 KVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
H +I VA+++ + P N + + + Y G++ E + + MR VV
Sbjct: 266 AQHGSI----EVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVV 318
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/725 (32%), Positives = 390/725 (53%), Gaps = 107/725 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A ++ +C + ++S ++H ++K F ++++ LID YAK
Sbjct: 157 LASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAK--------------- 201
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
G++D+A +F + + +W ++++G+A+ R +L F +
Sbjct: 202 ----------------RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQ 245
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + Y S LSAC+ + G Q+H + + + DV + + +ID Y KC +
Sbjct: 246 MREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHK 305
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R++F+ + ++++VSW ++I QN DA+++FV M+ G +PD SV+++
Sbjct: 306 VKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNS 365
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLRN-----DLVLG------ 291
C SL A ++G Q+HA ++ C+ L N DLV
Sbjct: 366 CGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSY 425
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIR---------------------------------- 317
NA+++ Y++ KL EA +F M +
Sbjct: 426 NAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIK 485
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ + ++++ Y+K S V ARL+F ++ +R++V WNA+ +GY+Q ENEE+L L
Sbjct: 486 FGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKL 545
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
++ L+ + P +TF ++ A +N+A L+ G+Q H V+K GL + D FV NSL
Sbjct: 546 YKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGL------DDDPFVTNSL 599
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCGS+E+ + F + +RD WN+MI AQ+G +AL +F++M++ G KP++
Sbjct: 600 VDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNY 659
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT +G+L ACSHAGL++ G +F SMSK G+ P DHY CMV LLGRAG + EAK ++
Sbjct: 660 VTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVK 718
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++P AV+W SLL+AC+V ++ LG Y A+ + +P++SG Y+LLSN++A G W
Sbjct: 719 KMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWAS 778
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V VR+ M VVK+PG SWIE+ V+ F+ +D H + I LVL L ++K GY
Sbjct: 779 VRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGY 838
Query: 673 VPNAS 677
VPNA+
Sbjct: 839 VPNAA 843
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 249/487 (51%), Gaps = 41/487 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK-M 142
+VF N+++ K DA +LF +MP R+ +W+SMVS + QH EAL F + M
Sbjct: 86 DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
S + +EY S + AC + Q+H + K + DVY+G++LID Y K G V
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
AR +FDG++ + V+W ++I Y + G + +L++F +M + PD ++SV+SAC
Sbjct: 206 DEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSAC 265
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ L + G QIH ++R D+ + N ++D Y KC K+ R +F+R+ ++VVS
Sbjct: 266 SMLEFLEGGKQIHGYVLR-RGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSW 324
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
T+M IAG QN + +A+ LF + R+
Sbjct: 325 TTM-------------------------------IAGCMQNSFHGDAMDLFVEMVRKGWK 353
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P + ++LN+C +L LQ GRQ H + +K + ++D FV N LIDMY KC S+
Sbjct: 354 PDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNI------DNDDFVKNGLIDMYAKCDSL 407
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ ++F+ + + VS+NAMI G ++ EAL LF++M L P +T + +L
Sbjct: 408 TNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLS 467
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
S L+E + + K G++ + ++D+ + C+ +A+ + E + D V+
Sbjct: 468 SSLFLLELSSQIHCLIIK-FGVSLDSFAGSALIDVYSKCSCVGDARLVFEEI-YDRDIVV 525
Query: 563 WGSLLAA 569
W ++ +
Sbjct: 526 WNAMFSG 532
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 184/333 (55%), Gaps = 39/333 (11%)
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
+ DV++ + L+ Y K S A+++FD M RN+V+W+S+++ Y Q+G + +AL +F
Sbjct: 83 HQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFC 142
Query: 242 RMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
R M S E P+E LASVV AC L + LQ+H +++ ++ D+ +G +L+D YAK
Sbjct: 143 RFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ-DVYVGTSLIDFYAK 201
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G ++EAR +FD + ++ V+ T++++GYAK
Sbjct: 202 RGYVDEARLIFDGLKVKTTVTWTAIIAGYAKL---------------------------- 233
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
G +E +L LF ++ V P Y ++L+AC+ L L+ G+Q H +V++ G
Sbjct: 234 ---GRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGF---- 286
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
+ D+ V N +ID Y+KC V+ G ++F +V++D VSW MI GC QN + +A+ LF
Sbjct: 287 --DMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLF 344
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+M+ G KPD VL +C +++GR+
Sbjct: 345 VEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQ 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 388 FGNLLN-ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
G LL N+ ++ H H+V G + D+F+ N+L+ Y K D
Sbjct: 53 LGKLLQLPSPNILTSHYYKKIHAHIVVLGF-----HQHDVFLVNTLLHAYSKMNLQSDAQ 107
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF-KKMLLCGEKPDHVTMIGVLCACSHA 505
++F+TM R+ V+W++M+ Q+GY EAL LF + M C EKP+ + V+ AC+
Sbjct: 108 KLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQL 167
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
G + + + + K ++D Y T ++D + G +DEA+ + + + ++ V W
Sbjct: 168 GNLSQALQLHGFVVKG---GFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKT-TVTW 223
Query: 564 GSLLAA 569
+++A
Sbjct: 224 TAIIAG 229
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 368/679 (54%), Gaps = 80/679 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++ ++ +L C KS +D ++VH+ I + + + +L+ YA CG L R+V
Sbjct: 97 LETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFI--------------------DDASRLFASMPERDQ 116
FD M KNV+ WN +++ K G + A LF + +RD
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SWNSM+SG+ + LG + +M + + S L CA S +G VH+L
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
KS + + + L+DMY KCG + A RVF+ M ERN+VSW S+I Y ++G + A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++ +M G++ D V + S++ ACA + G +H ++ + ++L + NAL+D
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DYIKANNMESNLFVCNALMD 395
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAKCG S+++A +F+ M+ ++++SWN +
Sbjct: 396 MYAKCG-------------------------------SMEAANSVFSTMVVKDIISWNTM 424
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I GE LK P T +L ACA+L+ L+ G++ H +++++G
Sbjct: 425 I------GE----------LK-----PDSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
SD V N+L+D+Y+KCG + +F+ + +D VSW MI G +GYG EA
Sbjct: 464 ------SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ F +M G +PD V+ I +L ACSH+GL+E+G ++F M + + P +HY CMVD
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LL R G L +A IE +P+ PDA IWG+LL C+ + +I L E VA+++ E+EP NSG
Sbjct: 578 LLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGY 637
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV-KDKRHPLNKE 655
YVLL+N+YAE +W EV R+R+ + K+G+ K PGCSWIEI G VN+F+ + HP +K
Sbjct: 638 YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKN 697
Query: 656 IYLVLKMLTREMKRVGYVP 674
I +LK + R+MK G+ P
Sbjct: 698 IESLLKKMRRKMKEEGHFP 716
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 192/389 (49%), Gaps = 41/389 (10%)
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+ + +N+ I + Q G +A+E+ S +E T +SV+ CA L +F +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDGKK 120
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H+ +++ + D LG LV YA CG L E R VFD M +NV MVS YAK
Sbjct: 121 VHS-IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 334 SVK--------------------SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
K SA +F K+ +R+V+SWN++I+GY NG E LG++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + + T ++L CAN L LG+ H+ +K S E I N+L+
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK------SSFERRINFSNTLL 293
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG ++ R+FE M ER+ VSW +MI G ++G A+ L ++M G K D V
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 494 TMIGVLCACSHAGLVEEGR---KYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAK 548
+ +L AC+ +G ++ G+ Y + + E L + C ++D+ + G ++ A
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIKANNMESNL------FVCNALMDMYAKCGSMEAAN 407
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
++ M ++ D + W +++ K M
Sbjct: 408 SVFSTMVVK-DIISWNTMIGELKPDSRTM 435
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/653 (35%), Positives = 363/653 (55%), Gaps = 69/653 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A L C + ++H+ +K E+ + N L+ +YAKC CL
Sbjct: 245 LACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCL----------- 293
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DDA RLF +P D +WN M+SG Q+ EALG F
Sbjct: 294 --------------------DDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCD 333
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + S L A K G +VH + ++ D ++ SAL+D+Y KC
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRD 393
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR ++D R ++V +++I+ Y NG + AL++F ++ I+P+ VT+ASV+ A
Sbjct: 394 VRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPA 453
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS++A G +IH ++R + +AL+DMYAKCG+L+
Sbjct: 454 CASISALPLGQEIHGYVLR-NAYEGKCYVESALMDMYAKCGRLD---------------- 496
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+S Y +F+KM ++ V+WN++I+ ++QNGE +EAL LFR + E +
Sbjct: 497 ----LSHY-----------IFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGI 541
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ T + L+ACA+L + G++ H ++K ++ +DIF ++LIDMY KCG+
Sbjct: 542 KYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIK------ADIFAESALIDMYAKCGN 595
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E R+FE M +++ VSWN++I +G E++ +M G KPDHVT + ++ A
Sbjct: 596 MELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISA 655
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGLVEEG + F M+KE+ +AP +H+ CMVDL R+G LD+A I MP +PDA
Sbjct: 656 CAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAG 715
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL AC+VHRN+ L + +++L +++P NSG YVL+SN+ A GRW V +VR+LM+
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
++K PG SW+++ ++F+ DK HP +++IY LK L +E++ GYVP
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVP 828
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/559 (28%), Positives = 263/559 (47%), Gaps = 77/559 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ SC +VS R VH + AS++++ + LI +Y+ G L AR F
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D MP RD WN M+ G+ + A+
Sbjct: 200 D-------------------------------GMPWRDCVLWNVMMDGYIKAGDVGGAVR 228
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + + LS CA D G Q+H+L K +V + + L+ MY
Sbjct: 229 LFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYA 288
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A R+F+ + ++V+WN +I+ QNG +AL +F M+ SG PD VTL S
Sbjct: 289 KCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVS 348
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A L K+G ++H ++R + D L +ALVD+Y KC + AR ++D
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIIR-NCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAI 407
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV ++++SG Y NG +E+AL +FR L
Sbjct: 408 DVVIGSTVISG-------------------------------YVLNGMSEKALQMFRYLL 436
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA+++ L LG++ H +V+++ E +V ++L+DMY
Sbjct: 437 EQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAY------EGKCYVESALMDMYA 490
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ IF M +D V+WN+MI +QNG EAL LF++M + G K ++VT+
Sbjct: 491 KCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISS 550
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAM 554
L AC+ + G++ + K P+K + ++D+ + G ++ A + E M
Sbjct: 551 ALSACASLPAIYYGKEIHGVIIK----GPIKADIFAESALIDMYAKCGNMELALRVFEFM 606
Query: 555 PMQPDAVIWGSLLAACKVH 573
P + V W S+++A H
Sbjct: 607 P-DKNEVSWNSIISAYGAH 624
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 243/503 (48%), Gaps = 60/503 (11%)
Query: 80 MSNKNVFTWNSIITGLLKWGF-IDDASRLFASMPERDQCS---WNSMVSGFAQHDRFSEA 135
+SN N ++ + G+ DA +F+++P S WN ++ GF S A
Sbjct: 64 LSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLA 123
Query: 136 LGYFVKMHSENFALSE--YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ ++VKM + A S ++ + +CA +G VH + +SDVY+GSALI
Sbjct: 124 VLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALI 183
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY G + AR FDGM R+ V WN ++ Y + G A+ +F M SG EP+
Sbjct: 184 KMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFA 243
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TLA +S CA+ A G+Q+H+ ++C L ++ + N L+ MYAKC L++A +F+
Sbjct: 244 TLACFLSVCAAEADLLSGVQLHSLAVKC-GLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P ++V+ WN +I+G QNG +EALGLF
Sbjct: 303 LPRDDLVT-------------------------------WNGMISGCVQNGLLDEALGLF 331
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ R P T +LL A +L L+ G++ H +++++ + D F+ ++L+
Sbjct: 332 CDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHM------DAFLVSALV 385
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
D+Y KC V +++ D V + +I G NG +AL +F+ +L KP+ V
Sbjct: 386 DIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAV 445
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCLDE 546
T+ VL AC+ + G++ HG L++ Y + ++D+ + G LD
Sbjct: 446 TVASVLPACASISALPLGQEI-------HGYV-LRNAYEGKCYVESALMDMYAKCGRLDL 497
Query: 547 AKTLIEAMPMQPDAVIWGSLLAA 569
+ + M ++ D V W S++++
Sbjct: 498 SHYIFSKMSLK-DEVTWNSMISS 519
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/539 (41%), Positives = 331/539 (61%), Gaps = 46/539 (8%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S L+ C + G +VHA + K+ Y VY+ + LI +Y KC + ARRV D M
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
ERN+VSW ++I+ Y Q G AS+AL +FV M+ SG P+E T A+V+++C S + F+ G Q
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH+ +++ + + +G++L+DMYAK A
Sbjct: 133 IHSLVIKT-SFESHIFVGSSLLDMYAK-------------------------------AG 160
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+ AR +F + ER+VVS A+I+GY Q G +EEAL LFR L+RE + + T+ ++L
Sbjct: 161 KICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 220
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + LA L GRQ H+HV++ L F + + NSLIDMY KCGS+ RIF++M
Sbjct: 221 ALSGLAALDHGRQVHSHVLRAKLPFY------VVLQNSLIDMYSKCGSLTYSRRIFDSMP 274
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGR 512
ER +SWNAM+VG +++G G EA+ LFK M + KPD VT + VL CSH G+ + G
Sbjct: 275 ERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGL 334
Query: 513 KYFSSM-SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ F M +++ G P +HY C+VDL GRAG ++EA I+ MP +P A IWGSLL AC+
Sbjct: 335 EIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 394
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH+N+ +GE+VA++LLEIE N+G YV+LSN+YA GRW +V VR+LM+++ V+K+PG
Sbjct: 395 VHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGR 454
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
SWIE+ ++ F D+ HP +E++ ++ L+ ++K GYVP S DDE E+
Sbjct: 455 SWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEK 513
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 236/448 (52%), Gaps = 69/448 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C+ ++ + +RVHA +IK+ + ++++ RLI +Y KC CL AR+V D+M
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NV +W ++I+G ++Q SEAL FV+
Sbjct: 73 ERNVVSWTAMISG-------------------------------YSQRGYASEALHLFVE 101
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M A +E++F + L++C S F++G Q+H+L+ K+ + S +++GS+L+DMY K G+
Sbjct: 102 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 161
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARRVFDG+ ER++VS ++I+ Y Q G +AL++F R+ G+ + VT ASV++A
Sbjct: 162 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 221
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LAA G Q+H+ ++R KL +VL N+L+DMY+KCG L +R +FD MP R V+S
Sbjct: 222 LSGLAALDHGRQVHSHVLRA-KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS 280
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
+M+ GY+K +G EA+ LF+L+K E+
Sbjct: 281 WNAMLVGYSK-------------------------------HGLGREAVELFKLMKEENK 309
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P TF +L+ C++ G + +V G E +I ++D++ + G
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQK----DGFEPEIEHYGCVVDLFGRAG 365
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGC 467
VE+ + M E W +++ C
Sbjct: 366 RVEEAFEFIKKMPFEPTAAIWGSLLGAC 393
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 48/335 (14%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M G+E + SV++ C S A +EG ++HA +++ + L L+ +Y KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCR 59
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L +AR V D MP RNVVS T+M+SGY +Q
Sbjct: 60 CLGDARRVLDEMPERNVVSWTAMISGY-------------------------------SQ 88
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EAL LF + P +TF +L +C + + QLGRQ H+ V+K
Sbjct: 89 RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSF------ 142
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
ES IFVG+SL+DMY K G + + R+F+ + ERD VS A+I G AQ G EAL LF++
Sbjct: 143 ESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRR 202
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC----MVDLL 538
+ G + ++VT VL A S ++ GR+ S H L Y ++D+
Sbjct: 203 LQREGMRSNYVTYASVLTALSGLAALDHGRQVHS-----HVLRAKLPFYVVLQNSLIDMY 257
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ G L ++ + ++MP + + W ++L H
Sbjct: 258 SKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKH 291
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/579 (38%), Positives = 340/579 (58%), Gaps = 23/579 (3%)
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK-MHSENFALSEYSFG 155
+W +D + + + + SWN + GF + EA+ + + + + Y++
Sbjct: 24 EWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYP 83
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
ACA +MG+++ + + SD+++ +A+I + CG + AR++FD R
Sbjct: 84 LLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR 143
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++VSWNS+I Y + G A +AL + M GI+PDEVT+ VVS+CA L G + H
Sbjct: 144 DLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESH 203
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ L+ + L NAL+DMY KCG L AR +FD M + +VS T+M
Sbjct: 204 CYIEE-NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM---------- 252
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+F +M +++VV WNA+I GY +EAL LF ++ ++ P T + L+AC
Sbjct: 253 -----LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSAC 307
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ L L +G H ++ KH L ++ +G +LIDMY KCG + ++F+ + R
Sbjct: 308 SQLGALDVGIWIHHYIEKHELSL------NVALGTALIDMYAKCGKITKAIQVFQELPGR 361
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
+ ++W A+I G A +G A+ F +M+ PD VT +G+L AC H GLVEEGRKYF
Sbjct: 362 NSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYF 421
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
S MS + L+P HY+CMVDLLGRAG L+EA+ LI++MP++ DAV+WG+L AC++H N
Sbjct: 422 SQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 481
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+++GE A KLL+++P +SG YVLL+NMY E W E + RKLMR+RGV K PGCS IE
Sbjct: 482 VLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIE 541
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+ G V F+V+DK HP +++IY L LTR+++ V P
Sbjct: 542 VNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 580
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 214/477 (44%), Gaps = 97/477 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L +C R + + ++ F S+IF+ N +I + CG L GARK+F
Sbjct: 78 DNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMF 137
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK +++ +WNS+I G ++ G+ EAL
Sbjct: 138 DKSCVRDLVSWNSMINGYVRRGWA-------------------------------YEALN 166
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ +M E E + +S+CA D +G + H + ++ V + +AL+DMY
Sbjct: 167 FYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYM 226
Query: 198 KCGRVSCARRVFDGMR----------------ERNIVSWNSLITCYEQNGPASDALEVFV 241
KCG + AR++FD M ++++V WN++I Y +AL +F
Sbjct: 227 KCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFN 286
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M A I PDEVT+ S +SAC+ L A G+ IH + + E L ++ LG AL+DMYAKC
Sbjct: 287 EMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHE-LSLNVALGTALIDMYAKC 345
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
GK+ +A VF +P RN ++ T+++SG A + A F++M++
Sbjct: 346 GKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDN------------- 392
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
SV P TF LL+AC H +V+ G ++ S
Sbjct: 393 ------------------SVMPDEVTFLGLLSAC-----------CHGGLVEEGRKYFSQ 423
Query: 422 EESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
S + L +D+ + G +E+ + ++M +E D V W A+ C +G
Sbjct: 424 MSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 364/643 (56%), Gaps = 52/643 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYF-VKMHSE 145
S++ G + DA+ F ++P RD N+M+S FA+ + A+ F + S
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 146 NFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSALIDMYGKC---- 199
+ +YSF + +SA + TQ+H + KS ++ + + +ALI +Y KC
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 200 ------------------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G V+ AR VF+ + + V WN++I+ Y Q
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK---LRN 286
+G +DA E+F RM++ + DE T SV+SACA+ F G +H +++R +
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
L + NALV +Y+K GK+ A+ +FD M +++VVS +++SGY + + A +F M
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+N +SW +++GY G +E+AL LF ++ E V P YT+ + AC L L+ GRQ
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H H+V+ G E+ GN+L+ MY KCG+V D +F M D VSWNAMI
Sbjct: 456 LHAHLVQCGF------EASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISA 509
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
Q+G+G EAL LF +M+ G PD ++ + +L AC+HAGLV+EG YF SM ++ G++P
Sbjct: 510 LGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISP 569
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+DHY ++DLLGR+G + EA+ LI+ MP +P IW ++L+ C+ + ++ G Y A +L
Sbjct: 570 GEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQL 629
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
+ P + G Y+LLSN Y+ GRW + RVRKLMR RGV K+PGCSWIE+ ++VF+V
Sbjct: 630 FRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVG 689
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQ 685
D +HP +E+Y L+++ M+++GYVP+ D E +E++
Sbjct: 690 DTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKE 732
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 223/477 (46%), Gaps = 88/477 (18%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCL---YGARKVFDKMSNKNVFTWNSIITGLL 96
++H ++KS A+ + + N LI +Y KC + ARKV D+M +K+ TW +++ G +
Sbjct: 184 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 243
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
+ G ++ A +F + + WN+M+SG+ Q ++A F +M SE L E++F S
Sbjct: 244 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYS----SDVYMGSALIDMYGKCGRVSCARRVFDGM 212
LSACA + F G VH + + + + + + + +AL+ +Y K G++ A+R+FD M
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 213 RERNIVSWNS-------------------------------LITCYEQNGPASDALEVFV 241
+++VSWN+ +++ Y G + DAL++F
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M A ++P + T A ++AC L A K G Q+HA L++C GNAL+ MYAKC
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC-GFEASNSAGNALLTMYAKC 482
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G +N+AR VF MP + VS WNA+I+
Sbjct: 483 GAVNDARLVFLVMPNLDSVS-------------------------------WNAMISALG 511
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q+G EAL LF + E + P +F +L AC H +V G +
Sbjct: 512 QHGHGREALELFDQMVAEGIDPDRISFLTILTAC-----------NHAGLVDEGFHYFES 560
Query: 422 EESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ D + LID+ + G + + + +TM E W A++ GC NG
Sbjct: 561 MKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 171/318 (53%), Gaps = 4/318 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASE--IFIQNRLIDV 63
+++V + LD F +L +C + + VH +II+ Q F E + + N L+ +
Sbjct: 287 RRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTL 346
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+K G + A+++FD M+ K+V +WN+I++G + G +D A +F MP ++ SW MV
Sbjct: 347 YSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMV 406
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
SG+ +AL F +M +E+ +Y++ A++AC K G Q+HA L + +
Sbjct: 407 SGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFE 466
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ G+AL+ MY KCG V+ AR VF M + VSWN++I+ Q+G +ALE+F +M
Sbjct: 467 ASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQM 526
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+A GI+PD ++ ++++AC EG + R + L+D+ + G+
Sbjct: 527 VAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGR 586
Query: 304 LNEARCVFDRMPIRNVVS 321
+ EAR + MP S
Sbjct: 587 IGEARDLIKTMPFEPTPS 604
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 252/720 (35%), Positives = 382/720 (53%), Gaps = 114/720 (15%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A L +C S R +H I + F S +F+ N L+ +Y++CG L A VFD++
Sbjct: 153 PYA--LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEI 210
Query: 81 SNK---NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K +V +WNSI+ +K A LF+ M SM+ + S+ +
Sbjct: 211 TRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM---------SMIVHEKATNERSDII- 260
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
S + L ACA ++H+ ++ +D ++ +ALID Y
Sbjct: 261 ---------------SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYA 305
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP------------------------- 232
KCG ++ A +VF+ M +++VSWN+++T Y Q+G
Sbjct: 306 KCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSA 365
Query: 233 ----------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA-RLMRC 281
+ +AL+ F +M+ G EP+ VT+ S++SACASL A +G++IHA L +C
Sbjct: 366 VIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKC 425
Query: 282 ----------EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+ DL++ NAL+DMY+KC AR +FD +P R
Sbjct: 426 LLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRR-------------- 471
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR--LLKRESVCPTHYTFG 389
ERNVV+W +I GY Q G++ +AL +F + K +V P YT
Sbjct: 472 ---------------ERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTIS 516
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+L ACA+LA L++G+Q H +V +H E S FV N LIDMY KCG V+ +F
Sbjct: 517 CILMACAHLAALRMGKQIHAYVTRHH----EYEPSVYFVANCLIDMYSKCGDVDTARNVF 572
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
++M +R+ VSW +M+ G +G G EAL +F KM G PD ++ + +L ACSH+G+V+
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVD 632
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G YF M +++ + +HY C++DLL R G LD+A I+ MPM+P AVIW +LL+A
Sbjct: 633 QGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+VH N+ L EY KL+ ++ N G Y L+SN+YA RW +V R+R+LM+K G+ K+P
Sbjct: 693 CRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRP 752
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASDDEAYEEQN 686
GCSW++ F V D+ HPL+ EIY +L+ L +K +GYVP A D EE+N
Sbjct: 753 GCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKN 812
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 290/582 (49%), Gaps = 42/582 (7%)
Query: 18 DSSP--FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D SP FA LL C +SV+ R++H +II S +
Sbjct: 28 DVSPTHFASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSVP---------LAPLP 75
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+S K++ T ++ L G DA + + WN +V + A
Sbjct: 76 SHSYVSPKSLGT--GVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRA 133
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+G +M ++ AL AC + G +H L+ + + S+V++ +AL+ M
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAM 193
Query: 196 YGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDALEVFVRM------MAS 246
Y +CG + A VFD + + +++SWNS++ + + ALE+F M A+
Sbjct: 194 YSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKAT 253
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
D +++ +++ ACASL A + +IH+ +R + V NAL+D YAKCG +N+
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVC-NALIDTYAKCGSMND 312
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN----VVSWNALIAGYTQ 362
A VF+ M ++VVS +MV+GY ++ + +A +F M + N V++W+A+IAGY Q
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL--- 419
G ++EAL F+ + + P T +LL+ACA+L L G + H + +K L L
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432
Query: 420 ---SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGYGT 474
G+ D+ V N+LIDMY KC S + IF+++ ER+ V+W MI G AQ G
Sbjct: 433 FGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 475 EALGLFKKML--LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP-LKDHY 531
+AL +F +M+ P+ T+ +L AC+H + G++ + +++ H P +
Sbjct: 493 DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVA 552
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
C++D+ + G +D A+ + ++MP + + V W S+++ +H
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMH 593
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 357/648 (55%), Gaps = 40/648 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR +FD M ++V ++ +++ L+K G + +A L+
Sbjct: 149 AASPFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQ 208
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + + +SGF +++ ALG F KM S + +F + AC G+ +F +
Sbjct: 209 CPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLA 268
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ KS + DV +AL+D+Y +
Sbjct: 269 MSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 328
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +LI +EQ G A++A++++ +M+A G P+ +SV
Sbjct: 329 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 388
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA+L + G +IHAR ++ N V ++L+DMY KC K +A+ +FD +P +N
Sbjct: 389 LSACATLEDLRGGARIHARSLKMGSSTNVFV-SSSLIDMYCKCKKCRDAQTIFDTLPEKN 447
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S+ SGY+ + A +F KM RN+ SWN +I+GY QN + +AL F +
Sbjct: 448 IVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLA 507
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACANL L G+ AH +K G+ E IF+G +L DMY K
Sbjct: 508 SGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGM------EESIFIGTALSDMYAK 561
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M ER+ V+W AMI G A+NG E++ LF+ M+ G P+ T + +
Sbjct: 562 SGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLAL 621
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF M + G++P + HYTCMVD+L RAG L EA+ L+ P +
Sbjct: 622 LFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKS 680
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++N +GE AK+L E+ N+ YVLLSNMYA GRW + R+R
Sbjct: 681 EANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRV 740
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
LM+ + K GCSW+++ G + F + +HPL+ EI +L +L E
Sbjct: 741 LMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSMEINEILDLLLWE 788
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 237/496 (47%), Gaps = 78/496 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F ++ +C+ + + IKS F S I +QN LI +Y + G ARKVFD+M
Sbjct: 252 FVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEM 311
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K+V +W +++ + G +D A R+ +MPER++ SW ++++ Q +EA+ +
Sbjct: 312 DVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYS 371
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M ++ + F S LSACA D + G ++HA K S++V++ S+LIDMY KC
Sbjct: 372 QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 431
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PAS-------------- 234
+ A+ +FD + E+NIV WNSL + Y NG PA
Sbjct: 432 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 491
Query: 235 -----DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
DAL F M+ASG P E+T +SV+ ACA+L + G HA+ ++ + +
Sbjct: 492 NRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKL-GMEESIF 550
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+G AL DMYAK G L ++ +F +MP RN V+ T+M+ G A+ + + L+F M+
Sbjct: 551 IGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATG 610
Query: 350 VV----SWNALIAGYTQNGENEEALGLFRLLKRESVCP--THYT---------------- 387
+ ++ AL+ + G E+A+ F ++ + P HYT
Sbjct: 611 MTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAE 670
Query: 388 --------------FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ LL+AC + ++G +A + + G D G L+
Sbjct: 671 ALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELG--------KDNTAGYVLL 722
Query: 434 -DMYMKCGSVEDGCRI 448
+MY CG +D RI
Sbjct: 723 SNMYASCGRWKDAARI 738
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 167/310 (53%), Gaps = 1/310 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R+HAR +K ++ +F+ + LID+Y KC
Sbjct: 372 QMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCK 431
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
A+ +FD + KN+ WNS+ +G G + +A LF MP R+ SWN+++SG+AQ
Sbjct: 432 KCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQ 491
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + E +F S L ACA G HA K +++
Sbjct: 492 NRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFI 551
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++R+F M ERN V+W ++I +NG A +++ +F MMA+G+
Sbjct: 552 GTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGM 611
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P+E T +++ AC+ ++ + + M+ + +VD+ A+ G+L EA
Sbjct: 612 TPNEHTFLALLFACSHGGLVEQAIHYFEK-MQAWGISPKEKHYTCMVDVLARAGRLIEAE 670
Query: 309 CVFDRMPIRN 318
+ + P ++
Sbjct: 671 ALLMKTPSKS 680
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 182/434 (41%), Gaps = 61/434 (14%)
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA-- 293
AL + + SG+ D + +++ + AAF AR C++ D V A
Sbjct: 102 ALSLHAHAVRSGVAADTSVASHLLT---TYAAF-------ARAAECDRAFGDCVAAGAAS 151
Query: 294 ------LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+V + K G + AR +FD MP R+VVS T+MV K V A ++ +
Sbjct: 152 PFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPS 211
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+V + A I+G+ +N + ALG+FR + V P TF ++ AC + L
Sbjct: 212 GSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSI 271
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE------------------------ 443
+K ES I V NSLI +Y++ G
Sbjct: 272 VGSAIKSNFF-----ESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVY 326
Query: 444 ------DGC-RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
DG R+ + M ER+ VSW +I Q G EA+ L+ +ML G +P+
Sbjct: 327 SESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFS 386
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+ + G + + S + G + + ++D+ + +A+T+ + +P
Sbjct: 387 SVLSACATLEDLRGGAR-IHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP- 444
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ + V W SL + + ++ Y+ KK+ N + + + YA+ ++ + +R
Sbjct: 445 EKNIVCWNSLASGYSYNGKMVEAMYLFKKM---PARNLASWNTIISGYAQNRQFVDALRS 501
Query: 617 RKLMRKRGVVKQPG 630
M G V PG
Sbjct: 502 FNAMLASGQV--PG 513
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 370/664 (55%), Gaps = 80/664 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + LL C S + R++HA + S F +++++N L+++YA CG + AR
Sbjct: 104 DSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSAR--- 160
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
R+F P D SWN++++G+ Q EA
Sbjct: 161 ----------------------------RVFEESPVLDLVSWNTLLAGYVQAGEVEEAER 192
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N S +++I ++G
Sbjct: 193 VFEGMPERNTIAS---------------------------------------NSMIALFG 213
Query: 198 KCGRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
+ G V ARR+F+G+R ER++VSW+++++CYEQN +AL +FV M SG+ DEV +
Sbjct: 214 RKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVV 273
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM- 314
S +SAC+ + + G +H ++ + + + L NAL+ +Y+ CG++ +AR +FD
Sbjct: 274 VSALSACSRVLNVEMGRWVHGLAVKV-GVEDYVSLKNALIHLYSSCGEIVDARRIFDDGG 332
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+ +++S SM+SGY + S++ A ++F M E++VVSW+A+I+GY Q+ EAL LF+
Sbjct: 333 ELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQ 392
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ V P + ++AC +LA L LG+ H ++ ++ L+ ++ + +LID
Sbjct: 393 EMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQV------NVILSTTLID 446
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MYMKCG VE+ +F M E+ +WNA+I+G A NG ++L +F M G P+ +T
Sbjct: 447 MYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEIT 506
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+GVL AC H GLV +GR YF+SM EH + HY CMVDLLGRAG L EA+ LI++M
Sbjct: 507 FMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSM 566
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PM PD WG+LL AC+ HR+ +GE + +KL++++P + G +VLLSN+YA G WG V+
Sbjct: 567 PMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVL 626
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+R +M + GVVK PGCS IE G V+ F+ DK HP +I +L ++ ++K GYVP
Sbjct: 627 EIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVP 686
Query: 675 NASD 678
S+
Sbjct: 687 TTSE 690
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 256/572 (44%), Gaps = 111/572 (19%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYS---SDVYMGSALIDMYGKCGRV---SCAR 206
+ S L +C FK LLS++ + +D Y S LI+ + +
Sbjct: 5 TLDSLLQSCKCPRHFKQ------LLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSL 58
Query: 207 RVFDGMRERNIVSWNSLITC--YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
R+F+ +R N +WN+++ Y QN P AL + +AS +PD T ++ CA+
Sbjct: 59 RIFNHLRNPNTFTWNTIMRAHLYLQNSP-HQALLHYKLFLASHAKPDSYTYPILLQCCAA 117
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ EG Q+HA + D+ + N L+++YA CG + AR VF+ P+ ++VS +
Sbjct: 118 RVSEFEGRQLHAHAVS-SGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176
Query: 325 MVSGYAKASSVKSARLMFTKMLERN---------------------------------VV 351
+++GY +A V+ A +F M ERN +V
Sbjct: 177 LLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMV 236
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW+A+++ Y QN EEAL LF +K V + L+AC+ + ++++GR H
Sbjct: 237 SWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLA 296
Query: 412 VKHGLR-FLS-------------------------GEESDIFVGNSLIDMYMKCGSVEDG 445
VK G+ ++S GE D+ NS+I Y++CGS++D
Sbjct: 297 VKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDA 356
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+F +M E+D VSW+AMI G AQ+ +EAL LF++M L G +PD ++ + AC+H
Sbjct: 357 EMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHL 416
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
++ G+ + +S+ + L T ++D+ + GC++ A + AM + W +
Sbjct: 417 ATLDLGKWIHAYISR-NKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNA 474
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
++ + + V + L NM+A++ + G V M G
Sbjct: 475 VILG------LAMNGSVEQSL---------------NMFADMKKTGTVPNEITFMGVLGA 513
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
+ G +V D RH N I+
Sbjct: 514 CRHMG-------------LVNDGRHYFNSMIH 532
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/708 (36%), Positives = 387/708 (54%), Gaps = 60/708 (8%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSV---SDTRRVHARIIK--------SQFASEIFIQ 57
+++ AFL P A+L +++K V + +ARI ++F S F+Q
Sbjct: 80 KLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQ 139
Query: 58 N---RLIDVYAKCGCLYGARKV---FDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFAS 110
+ V CG L RKV K+ + +V+ S I ++GF+ A LF +
Sbjct: 140 SDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDN 199
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
M RD +WN+M+SGF + + +EAL F +M ++ ++ + S L C D G
Sbjct: 200 MMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG 259
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+H K D+++ +ALI+MY K G + A +F+ M+ R+IVSWNSL+ +EQN
Sbjct: 260 VLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQN 319
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
AL V+ +M + G+ PD +TL S+ S A L F IH + R +D+ L
Sbjct: 320 KKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIAL 379
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GNA++DMYAK G ++ SAR +F + ++V
Sbjct: 380 GNAIIDMYAKLGFID-------------------------------SARKVFEGLPVKDV 408
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHT 409
+SWN+LI GY+QNG EA+ ++ ++ S P T+ ++L A + L L+ G +AH
Sbjct: 409 ISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHG 468
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++K+ L F DIFV L+DMY KCG + D +F + + VSWNA+I
Sbjct: 469 QLIKNFLYF------DIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL 522
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+GYG +A+ LFK+M G KPDH+T + +L ACSH+GLV+EG+ F M + +G+ P
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLK 582
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CMVDL GRAG L++A ++ MP++PD +WG+LL AC++H N+ L V+ LL++
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKV 642
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
E N G YVLLSN+YA+LG W V VR L R RG+ K PG S IE+ ++VF ++
Sbjct: 643 ESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQT 702
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQNGSNSTSD 693
HP +EIY L+ LT +MK +GYVP+ + D E E++N S S+
Sbjct: 703 HPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSE 750
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 264/546 (48%), Gaps = 75/546 (13%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
L V +++HA ++ S IF+ +LI+ YA G + AR FD++ K+V+TW
Sbjct: 51 LYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTW- 109
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
NSM+S +A+ F A+ F + S +F
Sbjct: 110 ------------------------------NSMISAYARIGHFHAAVDCFNEFLSTSFLQ 139
Query: 150 SE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
S+ Y+F + AC D G +VH L+ K + DVY+ ++ I Y + G VS A +
Sbjct: 140 SDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNL 196
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD M R+I +WN++I+ + NG ++ALEVF M + D VT++S++ C L
Sbjct: 197 FDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDI 256
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G+ IH ++ L DL + NAL++MYAK G+L A +F++M +R++
Sbjct: 257 ISGVLIHVYAIKL-GLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDI--------- 306
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
VSWN+L+A + QN + ALG++ + V P T
Sbjct: 307 ----------------------VSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTL 344
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L + A L + R H V + FL DI +GN++IDMY K G ++ ++
Sbjct: 345 VSLASVAAELGNFLSSRSIHGFVTRR-CWFL----HDIALGNAIIDMYAKLGFIDSARKV 399
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGL 507
FE + +D +SWN++I G +QNG EA+ ++ M G P+ T + +L A S G
Sbjct: 400 FEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGA 459
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+++G K + K + TC+VD+ G+ G L +A +L +P Q +V W +++
Sbjct: 460 LKQGMKAHGQLIKNFLYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNAII 517
Query: 568 AACKVH 573
+ +H
Sbjct: 518 SCHGLH 523
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/657 (35%), Positives = 363/657 (55%), Gaps = 69/657 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S FA +L C ++ ++H ++ S + + N L+ +YAKCG L+
Sbjct: 247 NSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLF------ 300
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA RLF MP+ D +WN M+SG+ Q+ EA
Sbjct: 301 -------------------------DARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M S +F S L + + G ++H + ++ S DV++ SALID+Y
Sbjct: 336 LFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYF 395
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC V AR++FD +IV ++I+ Y NG ++ALE+F ++ + + VTLAS
Sbjct: 396 KCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 455
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA LAA G ++H +++ +G+A++DMYAKCG+L+ A F
Sbjct: 456 VLPACAGLAALTLGKELHGHILK-NGHGGSCYVGSAIMDMYAKCGRLDLAHQTF------ 508
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +++ V WN++I +QNG+ EEA+ LFR +
Sbjct: 509 -------------------------IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMG 543
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ L+ACANL L G++ H +++ R SD+F ++LIDMY
Sbjct: 544 MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR------SDLFAESALIDMYS 597
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+++ CR+F+TM E++ VSWN++I +G ++L LF ML G +PDHVT +
Sbjct: 598 KCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLA 657
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
++ AC HAG V+EG YF M++E G+ +HY CMVDL GRAG L+EA +I +MP
Sbjct: 658 IISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFS 717
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA +WG+LL AC++H N+ L E ++ L +++P NSG YVLLSN++A G+W V+++R
Sbjct: 718 PDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIR 777
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
LM++RGV K PGCSWI++ ++F+ D+ HP + +IYL+LK L E+++ GYVP
Sbjct: 778 SLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 275/556 (49%), Gaps = 71/556 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C SV+ R VH +I F ++F+ + LI Y++ GC
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC-------- 197
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I DA LF MP +D WN M++G+ ++ + A G
Sbjct: 198 -----------------------IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + +F LS CA + G+Q+H L+ S D + + L+ MY
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + ARR+FD M + ++V+WN +I+ Y QNG +A +F M+++ ++PD +T +S
Sbjct: 295 KCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSS 354
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ + A ++G +IH ++R + D+ L +AL+D+Y KC + AR +FD+
Sbjct: 355 FLPLLSEGATLRQGKEIHCYIIR-NGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPV 413
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++V T+M+S GY NG N AL +FR L
Sbjct: 414 DIVVCTAMIS-------------------------------GYVLNGMNNNALEIFRWLL 442
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E + T ++L ACA LA L LG++ H H++K +G +VG++++DMY
Sbjct: 443 QERMRANSVTLASVLPACAGLAALTLGKELHGHILK------NGHGGSCYVGSAIMDMYA 496
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ + F + ++D V WN+MI C+QNG EA+ LF++M + G K D V++
Sbjct: 497 KCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISA 556
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L AC++ + G++ + M + + L + ++D+ + G LD A + + M +
Sbjct: 557 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAE-SALIDMYSKCGNLDLACRVFDTME-E 614
Query: 558 PDAVIWGSLLAACKVH 573
+ V W S++AA H
Sbjct: 615 KNEVSWNSIIAAYGNH 630
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 248/547 (45%), Gaps = 73/547 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C +S R+ HA+++ + + +L+ +Y CG A+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL---- 107
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
RL+ S P WN M+ GF +F AL ++ KM
Sbjct: 108 ---------------------RLWCSEP------WNWMIRGFTMMGQFDFALLFYFKMLG 140
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+Y+F + AC G +G VH + + DV++GS+LI Y + G +
Sbjct: 141 CGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHD 200
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +FD M ++ V WN ++ Y +NG +A VF+ M + P+ VT A V+S CAS
Sbjct: 201 ARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCAS 260
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
G Q+H L+ L D + N L+ MYAKCG L +AR +FD MP ++V+
Sbjct: 261 EIMINFGSQLHG-LVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNG 319
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SG Y QNG +EA LF + + P
Sbjct: 320 MISG-------------------------------YVQNGFMDEASCLFHEMISARMKPD 348
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
TF + L + A L+ G++ H +++++G+ D+F+ ++LID+Y KC VE
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSL------DVFLKSALIDIYFKCRDVEM 402
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+IF+ D V AMI G NG AL +F+ +L + + VT+ VL AC+
Sbjct: 403 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAG 462
Query: 505 AGLVEEGRKYFSSMSKE-HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
+ G++ + K HG + + ++D+ + G LD A + DAV W
Sbjct: 463 LAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCW 519
Query: 564 GSLLAAC 570
S++ +C
Sbjct: 520 NSMITSC 526
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 165/358 (46%), Gaps = 38/358 (10%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L C G Q HA + + + +G+ L+ MY CG A+ +F +R
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
WN +I + G AL + +M+ G PD+ T V+ AC L + G +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++ + D+ +G++L+ Y++ G +++AR +FDRMP ++ V M++GY K
Sbjct: 171 DKI-QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK---- 225
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
NG+ + A G+F ++R P TF +L+ C
Sbjct: 226 ---------------------------NGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+ + G Q H VV GL E D V N+L+ MY KCG + D R+F+ M +
Sbjct: 259 ASEIMINFGSQLHGLVVSSGL------EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKT 312
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D V+WN MI G QNG+ EA LF +M+ KPD +T L S + +G++
Sbjct: 313 DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKE 370
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + +S+ P ++L C + + L GRQAH ++ +G+ + + +G L
Sbjct: 37 FSIHNDDSLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNGIGY------NGILGTKL 87
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVS--WNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+ MY+ CG+ D IF + R W S WN MI G G AL + KML CG P
Sbjct: 88 LGMYVLCGAFLDAKNIFYQL--RLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLP 145
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D T V+ AC V GR + + G + ++ GC+ +A+ L
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKI-QFMGFELDVFVGSSLIKFYSENGCIHDARYL 204
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ MP + D V+W N+ML YV
Sbjct: 205 FDRMPSK-DGVLW-----------NVMLNGYV 224
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/563 (38%), Positives = 335/563 (59%), Gaps = 13/563 (2%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN +++ + + ++ AL + ++ +F + + S L AC ++G ++H +
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K DV++G+AL+ MYG+C V AR VFD M ER++VSW+++I +N ALE
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG----NAL 294
+ M + P EV + S+V+ A A + G +HA ++R N+ +G AL
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS---NNEHMGVPTTTAL 268
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+DMYAKCG L AR +F+ + + VVS T+M++G +++ ++ AR +F R+V+ W
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+++ Y Q ++A LF ++ V PT T +LL+ CA L LG+ H+++ K
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
+ E D + +L+DMY KCG + R+F + RD WNA+I G A +GYG
Sbjct: 389 RV------EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE 442
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
EAL +F +M G KP+ +T IG+L ACSHAGLV EG+K F M GL P +HY CM
Sbjct: 443 EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCM 502
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
VDLLGRAG LDEA +I++MP++P+ ++WG+L+AAC++H+N LGE A +LLEIEP N
Sbjct: 503 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENC 562
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNK 654
G VL+SN+YA RW + VRK M+ G+ K+PG S IE+ G V+ F++ D+ HP +
Sbjct: 563 GYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIR 622
Query: 655 EIYLVLKMLTREMKRVGYVPNAS 677
I +L + R++ GYVP+ S
Sbjct: 623 RINEMLAEMRRKLNEAGYVPDTS 645
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 218/479 (45%), Gaps = 106/479 (22%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + + +H ++K ++F+ N L+ +Y +C C+ AR VFDKM ++
Sbjct: 130 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 189
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +W+++I L +++ F AL +M+
Sbjct: 190 VVSWSTMIRSL-------------------------------SRNKEFDMALELIREMNF 218
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG----SALIDMYGKCG 200
SE + S ++ A + + +MG +HA + R S++ +MG +AL+DMY KCG
Sbjct: 219 MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV--IRNSNNEHMGVPTTTALLDMYAKCG 276
Query: 201 RVSCARRVFDGMRERNIVSWNSLI-------------------------------TCYEQ 229
+ AR++F+G+ ++ +VSW ++I + Y Q
Sbjct: 277 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQ 336
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
A +F +M SG+ P +VT+ S++S CA A G +H+ + + E++ D +
Sbjct: 337 ANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK-ERVEVDCI 395
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L ALVDMYAKCG +N A RL F + + R+
Sbjct: 396 LNTALVDMYAKCGDINAA------------------------------GRL-FIEAISRD 424
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
+ WNA+I G+ +G EEAL +F ++R+ V P TF LL+AC++ + G++
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 484
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+V H + E ++D+ + G +++ + ++M ++ + + W A++ C
Sbjct: 485 KMV-HTFGLVPQIEH----YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 538
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 167/312 (53%), Gaps = 3/312 (0%)
Query: 39 RRVHARIIKSQFASEIFIQNR--LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
+ +HA +I++ + + L+D+YAKCG L AR++F+ ++ K V +W ++I G +
Sbjct: 245 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
+ +++A LF S RD W +M+S +AQ + +A F +M + ++ + S
Sbjct: 305 RSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVS 364
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
LS CA + +G VH+ + K R D + +AL+DMY KCG ++ A R+F R+
Sbjct: 365 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 424
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
I WN++IT + +G +AL++F M G++P+++T ++ AC+ EG ++
Sbjct: 425 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 484
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSV 335
+++ L + +VD+ + G L+EA + MPI+ N + ++V+ +
Sbjct: 485 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNP 544
Query: 336 KSARLMFTKMLE 347
+ L T++LE
Sbjct: 545 QLGELAATQLLE 556
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/653 (34%), Positives = 365/653 (55%), Gaps = 70/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C V + VH +IKS FA ++ + + + +YAKC
Sbjct: 105 DAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC---------- 154
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
NVF +DA +LF MPERD SWN+++S + Q + +AL
Sbjct: 155 ------NVF---------------EDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALE 193
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M F + + +S+CA +D + G ++H L +S ++ D ++ SAL+DMYG
Sbjct: 194 LFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYG 253
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A+ VF+ ++ +N+VSWNS+I Y G + +E+F RM GI P TL+S
Sbjct: 254 KCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSS 313
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ + G IH ++R ++ D+ + ++L+D+Y KCG
Sbjct: 314 ILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKCG--------------- 357
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ SA +F M + NVVSWN +I+GY + G EAL +F ++
Sbjct: 358 ----------------NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMR 401
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V P TF ++L AC+ LA L+ G++ H +++ L E +++ +G +L+DMY
Sbjct: 402 KAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL-----EINEVVMG-ALLDMYA 455
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG+V++ IF + ERD+VSW +MI +G EAL LF+KM KPD VT +
Sbjct: 456 KCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP-M 556
+L ACSHAGLV+EG YF+ M E+G P +HY+C++DLLGR G L EA +++ P +
Sbjct: 516 ILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDI 575
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D + +L +AC +H+ + LGE + + L+E +P + Y++LSNMYA + +W EV +V
Sbjct: 576 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKV 635
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R +++ G+ K PGCSWIE+ ++ F+V+DK HP IY + +L +++
Sbjct: 636 RLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEK 688
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 287/582 (49%), Gaps = 76/582 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D++ LL +C+ SK + + +H +I+ + I + LI++Y C A+ V
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + N D WN +++ ++ F E L
Sbjct: 61 FQTIENP------------------------------LDITLWNGLMAACTKNFIFIEGL 90
Query: 137 GYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F ++ H +++ S L AC+G G VH + KS ++ DV + S+ + M
Sbjct: 91 EVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGM 150
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KC A ++FD M ER++ SWN++I+CY Q+G ALE+F M SG +PD VTL
Sbjct: 151 YAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTL 210
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+S+CA L + G +IH L+R D + +ALVDMY KCG L A+ VF+++
Sbjct: 211 TTVISSCARLLDLERGKEIHMELVR-SGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 269
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+NVVS SM++G Y+ G+++ + LFR
Sbjct: 270 RKNVVSWNSMIAG-------------------------------YSLKGDSKSCIELFRR 298
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ E + PT T ++L AC+ +LQLG+ H +++++ + E+DIFV +SLID+
Sbjct: 299 MDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV------EADIFVNSSLIDL 352
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG++ +F+ M + + VSWN MI G + G EAL +F M G KPD +T
Sbjct: 353 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 412
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
VL ACS ++E+G++ + E L + ++D+ + G +DEA + +P
Sbjct: 413 TSVLPACSQLAVLEKGKE-IHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE-IEPSNSGP 596
+ D V W S++AA H + A KL E ++ S++ P
Sbjct: 472 -ERDFVSWTSMIAAYGSHGQ----AFEALKLFEKMQQSDAKP 508
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/617 (38%), Positives = 353/617 (57%), Gaps = 44/617 (7%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VFT S++ L++G I +A ++F M ERD +WN+M+SG ++ R +EA+G F +M
Sbjct: 102 SVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMV 161
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E A + S L C D + +H K ++++ +ALID+YGK G +
Sbjct: 162 GEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLE 221
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ VF GM R++V+WNS+I+ EQ G + AL++F M SG+ PD +TL S+ SA A
Sbjct: 222 EAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIA 281
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ +H +MR +D++ GNA+VDMYAK + A+ +FD MP+++ V
Sbjct: 282 QGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSV--- 338
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
SWN LI GY QNG EA+ + + K E +
Sbjct: 339 ----------------------------SWNTLITGYMQNGLANEAVERYGHMQKHEGLK 370
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
TF ++L A ++L LQ G + H +K GL D++VG LID+Y KCG +
Sbjct: 371 AIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV------DVYVGTCLIDLYAKCGKL 424
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ +FE M R WNA+I G +G+G EAL LF +M G KPDHVT + +L AC
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SHAGLV++GR +F M + + P+ HY CM D+LGRAG LDEA I+ MP++PD+ +
Sbjct: 485 SHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAV 544
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
WG+LL AC++H N+ +G+ ++ L E++P N G YVL+SNMYA++G+W V VR L+R+
Sbjct: 545 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 604
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKR--HPLNKEIYLVLKMLTREMKRVGYVPNAS--- 677
+ + K PG S IE+ VNVF ++ HP ++EI L+ L +++ VGYV + S
Sbjct: 605 QNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVL 664
Query: 678 -DDEAYEEQNGSNSTSD 693
D E E+++ N+ S+
Sbjct: 665 QDVEDDEKEHILNNHSE 681
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 193/399 (48%), Gaps = 52/399 (13%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K +F N++I K G +++A +F M RD +WNS++SG Q + + AL F
Sbjct: 201 DKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQG 260
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCG 200
M + + S SA A D + +H + + + D+ G+A++DMY K
Sbjct: 261 MRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLS 320
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVV 259
+ A+R+FD M ++ VSWN+LIT Y QNG A++A+E + M G++ + T SV+
Sbjct: 321 NIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVL 380
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A + L A ++G+++HA ++ L D+ +G L+D+YAKCGKL EA +F++MP
Sbjct: 381 PAYSHLGALQQGMRMHALSIKI-GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP---- 435
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
R+ WNA+I+G +G EAL LF +++E
Sbjct: 436 ---------------------------RRSTGPWNAIISGLGVHGHGAEALTLFSRMQQE 468
Query: 380 SVCPTHYTFGNLLNACANLADLQLGR------QAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ P H TF +LL AC++ + GR Q +V + +
Sbjct: 469 GIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHY-----------ACMA 517
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
DM + G +++ + M ++ D W A++ C +G
Sbjct: 518 DMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHG 556
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 179/409 (43%), Gaps = 45/409 (11%)
Query: 221 NSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
N+LI + + A + ++ A PD T S++ A S A+ Q+HA
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R +R + +LV Y + G+++EA VFD M R+V + +M+SG +
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCR------- 146
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
N EA+GLF + E V T ++L C L
Sbjct: 147 ------------------------NARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
D L H + VKHGL + ++FV N+LID+Y K G +E+ +F M RD V
Sbjct: 183 GDQVLALVMHVYAVKHGL------DKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLV 236
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
+WN++I GC Q G AL +F+ M G PD +T++ + A + G + +
Sbjct: 237 TWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYV 296
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH--RNI 576
+ +VD+ + ++ A+ + ++MP+Q D+V W +L+ + N
Sbjct: 297 MRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITGYMQNGLANE 355
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
+ Y + E + G +V + Y+ LG + +R+ L K G+
Sbjct: 356 AVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGL 404
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 30/265 (11%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
+I N ++D+YAK + A+++FD M ++ +WN++ITG ++ G ++A + M
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM- 363
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+H+ G FV + L YS AL + G +
Sbjct: 364 --------------QKHEGLKAIQGTFVSV------LPAYSHLGAL---------QQGMR 394
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+HAL K + DVY+G+ LID+Y KCG+++ A +F+ M R+ WN++I+ +G
Sbjct: 395 MHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGH 454
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
++AL +F RM GI+PD VT S+++AC+ +G + +
Sbjct: 455 GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYA 514
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIR 317
+ DM + G+L+EA MPI+
Sbjct: 515 CMADMLGRAGQLDEAFNFIQNMPIK 539
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L + ++ R+HA IK ++++ LID+YAKCG L A +F+KM
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMP 435
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ WN+II+GL H +EAL F +
Sbjct: 436 RRSTGPWNAIISGL-------------------------------GVHGHGAEALTLFSR 464
Query: 142 MHSENFALSEYSFGSALSAC--AGSVD 166
M E +F S L+AC AG VD
Sbjct: 465 MQQEGIKPDHVTFVSLLAACSHAGLVD 491
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/673 (35%), Positives = 363/673 (53%), Gaps = 71/673 (10%)
Query: 19 SSP-FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S P +A + SC +S R++HA IK++F+++ + ++DVYAK L
Sbjct: 236 SQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLV------ 289
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA R F S+P + N+M+ G + +EAL
Sbjct: 290 -------------------------DARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQ 324
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S SACA + G QVH L KS + DV + +A++D+YG
Sbjct: 325 LFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYG 384
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A VF M +R+ VSWN++I EQN D + M+ G+EPD+ T S
Sbjct: 385 KCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGS 444
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA L + + G +H + ++ L D + + +VDMY KCG + EA+ + DR+
Sbjct: 445 VLKACAGLQSLEYGSVVHGKAIK-SGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG-- 501
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +VSWN++I+G++ N ++EEA F +
Sbjct: 502 -----------------------------GQELVSWNSIISGFSLNKQSEEAQKFFSEML 532
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P H+T+ +L+ CANLA ++LG+Q H ++K + D ++ ++L+DMY
Sbjct: 533 DIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEML------GDEYISSTLVDMYA 586
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ D +FE + D+VSWNAMI G A +G G EAL +F++M P+H T +
Sbjct: 587 KCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVA 646
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GL+++G +YF M+ + L P +H+ CMVD+LGR+ EA I +MP++
Sbjct: 647 VLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLE 706
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DAVIW +LL+ CK+ +++ + E A +L ++P +S Y+LLSN+YAE G+W +V R R
Sbjct: 707 ADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTR 766
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+LMR+ + K+PGCSWIE+ ++ F+ DK HP ++E+Y +L L EMK GY P AS
Sbjct: 767 RLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP-AS 825
Query: 678 DDEAYEEQNGSNS 690
A ++ GS S
Sbjct: 826 ALFAEVDEEGSTS 838
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 279/573 (48%), Gaps = 42/573 (7%)
Query: 19 SSPFAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ F+ L C + +++ + HAR++ S F F+ N L+ +YA+CG AR V
Sbjct: 2 TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M +++ +WN+++T G A+ LF +MP+ D SWN+++SG+ Q F +++
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
G V+M A + L AC G D +G Q+HA+ K+ DV GSAL+DMY
Sbjct: 122 GLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMY 181
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKC + A R F GM ERN VSW + I QN + LE+FV+M G+ + A
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV +CA++ Q+HA ++ K D V+G A+VD+YAK L +AR F +P
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIK-NKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP- 299
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
V + NA++ G + G EAL LF+ +
Sbjct: 300 ------------------------------NHTVQACNAMMVGLVRTGLGAEALQLFQFM 329
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + + + +ACA + G Q H +K SG + D+ V N+++D+Y
Sbjct: 330 TRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK------SGFDVDVCVRNAILDLY 383
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KC ++ + +F+ M +RD VSWNA+I QN + + +ML G +PD T
Sbjct: 384 GKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYG 443
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC+ +E G K GL + +VD+ + G + EA+ L + +
Sbjct: 444 SVLKACAGLQSLEYGSVVHGKAIKS-GLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG 502
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
Q + V W S+++ +++ + ++L+I
Sbjct: 503 Q-ELVSWNSIISGFSLNKQSEEAQKFFSEMLDI 534
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 263/558 (47%), Gaps = 75/558 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A LL +C + ++ ++HA +K+ ++ + L+D+Y KC L A + F
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +N SW + ++G Q+++++ L
Sbjct: 195 HGMGERN-------------------------------SVSWGAAIAGCVQNEQYTRGLE 223
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FV+M +S+ ++ S +CA Q+HA K+++S+D +G+A++D+Y
Sbjct: 224 LFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYA 283
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K + ARR F + + + N+++ + G ++AL++F M SGI D V+L+
Sbjct: 284 KADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSG 343
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V SACA + + +GLQ+H ++ D+ + NA++D+Y KC L EA VF M
Sbjct: 344 VFSACAEVKGYLQGLQVHCLAIK-SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME-- 400
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+R+ VSWNA+IA QN E+ + +
Sbjct: 401 -----------------------------QRDSVSWNAIIAALEQNECYEDTIAYLNEML 431
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P +T+G++L ACA L L+ G H +K GL D FV ++++DMY
Sbjct: 432 RYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGL------DAFVSSTVVDMYC 485
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + + ++ + + ++ VSWN++I G + N EA F +ML G KPDH T
Sbjct: 486 KCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYAT 545
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
VL C++ +E G++ + K+ L D Y + +VD+ + G + ++ + E
Sbjct: 546 VLDTCANLATIELGKQIHGQIIKQEMLG---DEYISSTLVDMYAKCGNMPDSLLMFEK-A 601
Query: 556 MQPDAVIWGSLLAACKVH 573
+ D V W +++ +H
Sbjct: 602 QKLDFVSWNAMICGYALH 619
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 199/460 (43%), Gaps = 85/460 (18%)
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
A + +S L A AG G HA + S + ++ + L+ MY +CG + AR
Sbjct: 1 ATATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARG 60
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVF--------------------------- 240
VFD M R+ VSWN+++T Y G A +F
Sbjct: 61 VFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDS 120
Query: 241 ----VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
V M G+ PD TLA ++ AC L G+QIHA ++ L D+ G+ALVD
Sbjct: 121 VGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVK-TGLEMDVRAGSALVD 179
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY KC L +A F M R N VSW A
Sbjct: 180 MYGKCRSLEDALRFFHGMGER-------------------------------NSVSWGAA 208
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IAG QN + L LF ++R + + + ++ +CA + L RQ H H +K+
Sbjct: 209 IAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKF 268
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+D VG +++D+Y K S+ D R F ++ + NAM+VG + G G EA
Sbjct: 269 ------SADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEA 322
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY----- 531
L LF+ M G D V++ GV AC+ E + Y + + H LA +K +
Sbjct: 323 LQLFQFMTRSGIGFDVVSLSGVFSACA------EVKGYLQGL-QVHCLA-IKSGFDVDVC 374
Query: 532 --TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++DL G+ L EA + + M Q D+V W +++AA
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C +S+ VH + IKS + F+ + ++D+Y KCG + A+K+
Sbjct: 438 DDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLH 497
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ + + +WNSII SGF+ + + EA
Sbjct: 498 DRIGGQELVSWNSII-------------------------------SGFSLNKQSEEAQK 526
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +++ + L CA ++G Q+H + K D Y+ S L+DMY
Sbjct: 527 FFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYA 586
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + +F+ ++ + VSWN++I Y +G +ALE+F RM + + P+ T +
Sbjct: 587 KCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVA 646
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ AC+ + +G + + KL L +VD+ + EA MP+
Sbjct: 647 VLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPL 705
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/649 (35%), Positives = 355/649 (54%), Gaps = 40/649 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++F M K+V ++ +++ L+K G + DA L+
Sbjct: 146 AASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYER 205
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M+SGF +++ +A F KM + + + + + AC G+ +F +
Sbjct: 206 CPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLA 265
Query: 171 TQVHALLSKSRYSS--------------------------------DVYMGSALIDMYGK 198
V L K DV +AL+D+Y
Sbjct: 266 MGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYAD 325
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M RN VSW +LI +EQ G ++AL+++ +M+A G P+ +SV
Sbjct: 326 LGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSV 385
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA+L + G +IHA ++ N L + ++L+DMY KC + A+ VF+ +P +N
Sbjct: 386 LSACATLQDLRGGTRIHANALKMGSSTN-LFVSSSLIDMYCKCKQCTYAQRVFNSLPEKN 444
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V S++SGY+ + A +F KM RN VSWN +I+GY +N +AL F +
Sbjct: 445 TVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLA 504
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P T ++L ACANL L++GR H +VK G+ E +IF+G +L DMY K
Sbjct: 505 SGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGI------EDNIFMGTALCDMYAK 558
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M E++ ++W AM+ G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 559 SGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAI 618
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF +M + HG+ P HYTCMVD+L RAGCL EA+ L+ + +
Sbjct: 619 LFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSEL 677
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D W SLL+AC +RN +GE AKKL E+E N+ YVLLSNMYA G+W + R
Sbjct: 678 DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRI 737
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
LM+ + K GCSW+++ G + F ++HPL+ EIY +L +L E+
Sbjct: 738 LMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 231/464 (49%), Gaps = 77/464 (16%)
Query: 50 FASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFA 109
F I + N LI +Y + G AR+VFD M ++V +W +++ G +D A R+
Sbjct: 278 FEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLD 337
Query: 110 SMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM 169
+MP R++ SW ++++ Q +EAL + +M ++ + F S LSACA D +
Sbjct: 338 AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRG 397
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
GT++HA K S+++++ S+LIDMY KC + + A+RVF+ + E+N V WNSLI+ Y
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSW 457
Query: 230 NG------------PA-------------------SDALEVFVRMMASGIEPDEVTLASV 258
NG PA DAL F M+ASG P E+TL+SV
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACA+L + + G +HA +++ + +++ +G AL DMYAK G L+ +R VF +MP +N
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKL-GIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKN 576
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVV----SWNALIAGYTQNGENEEALGLFR 374
++ T+MV G A+ + + +F M+E + ++ A++ + G E+A+ F
Sbjct: 577 NITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFE 636
Query: 375 LLKRESVCP--THYT------------------------------FGNLLNACANLADLQ 402
++ + P HYT + +LL+AC+ + +
Sbjct: 637 TMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKE 696
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI-DMYMKCGSVEDG 445
+G +A + H L E D G L+ +MY CG +D
Sbjct: 697 IGERAAKKL--HEL------EKDNTAGYVLLSNMYASCGKWKDA 732
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 167/300 (55%), Gaps = 3/300 (1%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R+HA +K ++ +F+ + LID+Y KC
Sbjct: 369 QMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCK 428
Query: 69 -CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
C Y A++VF+ + KN WNS+I+G G + +A LF MP R+ SWN+M+SG+A
Sbjct: 429 QCTY-AQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYA 487
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
++ RF +AL YF M + E + S L ACA +MG VHA + K +++
Sbjct: 488 ENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIF 547
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
MG+AL DMY K G + +RRVF M E+N ++W +++ +NG A +++ +F M+ +G
Sbjct: 548 MGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENG 607
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I P+E T +++ AC+ ++ + + M+ + +VD+ A+ G L EA
Sbjct: 608 IAPNEHTFLAILFACSHCGLVEQAIH-YFETMQAHGIPPKSKHYTCMVDVLARAGCLPEA 666
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 354/653 (54%), Gaps = 69/653 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+L C SK++ + +H+ IIK + FI L+D+Y+KCG
Sbjct: 317 LTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG------------- 363
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DA +F ++ + D W+++++ Q + E++ F
Sbjct: 364 ------------------LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHL 405
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++Y+ S LSA + + + G +HA + K + +DV + +AL+ MY K G
Sbjct: 406 MRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGC 465
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V ++++ M +R+++SWN+ ++ G L +F M+ G P+ T S++ +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ L G Q+HA +++ + N+ V AL+DMYAKC L +
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLED--------------- 569
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
A + F ++ R++ +W +I Y Q + E+AL FR +++E V
Sbjct: 570 ----------------ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +T L+ C++LA L+ G+Q H+ V K SG SD+FVG++L+DMY KCG
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFK------SGHVSDMFVGSALVDMYAKCGC 667
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E+ +FE ++ RD ++WN +I G AQNG G +AL F+ ML G PD VT G+L A
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLVEEG+++F+SM ++ G++P DH CMVD+LGR G DE + I+ M + +A+
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL 787
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW ++L A K+H N++LGE A KL E++P Y+LLSN++A GRW +V RVR LM
Sbjct: 788 IWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMS 847
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+GV K+PGCSW+E G V+ F+ D HP +EI+L L L RE+ + YVP
Sbjct: 848 SKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVP 900
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 264/550 (48%), Gaps = 77/550 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L C +S+ + +H I+K + + L++VYAKC AR V
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVL---- 170
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
A MP+RD SW +++ G ++++ F +
Sbjct: 171 ---------------------------AKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E +E++ + L AC+ + +G Q+HA K D+++GSAL+D+Y KCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F GM E+N V+WN L+ Y Q G + L++F MM ++ +E TL +V+
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+ K+G IH+ +++C N+ + G LVDMY+KCG +A VF +
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFI-GCGLVDMYSKCGLAIDAIGVFKTIK------ 376
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ ++V W+ALI Q G++EE++ LF L++
Sbjct: 377 -------------------------KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +LL+A N +LQ G+ H V K+G E+D+ V N+L+ MYMK G
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF------ETDVAVSNALVTMYMKNGC 465
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V DG +++E+MV+RD +SWNA + G G L +F ML G P+ T I +L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
CS V GR+ + + K L D+ T ++D+ + L++A + ++
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQ----LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR- 580
Query: 559 DAVIWGSLLA 568
D W ++
Sbjct: 581 DLFTWTVIIT 590
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/547 (40%), Positives = 337/547 (61%), Gaps = 9/547 (1%)
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
Y +HS + +F + ACA G V + K +S+DV++ +A + +
Sbjct: 108 YRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWS 167
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTL 255
G ++ ARR+FD R++VSWN+LI Y ++G +ALE+F R+ G + PDEVT+
Sbjct: 168 VRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTV 227
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
VS CA + + G ++H + + +R + L NA++DMY KCG L A VF+R+
Sbjct: 228 IGAVSGCAQMGDLELGKRLH-EFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERIS 286
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R VS T+M+ G+A+ ++ AR++F +M ER+V WNAL+AGY QN + +EA+ LF
Sbjct: 287 NRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHE 346
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+++ V P T NLL+AC+ L L++G H ++ +H L + +G SL+DM
Sbjct: 347 MQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHL------SVALGTSLVDM 400
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG+++ +F + ++ ++W +MI G A +G+ EA+ F++M+ G +PD +T
Sbjct: 401 YAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITF 460
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IGVL AC HAGLVE GR++FS M ++ L HY+CM+DLLGRAG LDEA+ L+ AMP
Sbjct: 461 IGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMP 520
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
M PDAV+WG+L AC++H NI LGE A KL+E++PS+SG YVLL+NMYAE + +
Sbjct: 521 MDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADK 580
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VR +MR GV K PGCS IE+ G V+ F+VKDK H IY L +T +M+ + + +
Sbjct: 581 VRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHIANLID 640
Query: 676 ASDDEAY 682
S+ ++
Sbjct: 641 ISESGSH 647
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 156/288 (54%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
C + + +R+H + + + N ++D+Y KCG L A VF+++SN+ +W
Sbjct: 234 CAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSW 293
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I G + G ++DA LF MPERD WN++++G+ Q+ + EA+ F +M
Sbjct: 294 TTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVD 353
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E + + LSAC+ +MG VH + + + V +G++L+DMY KCG + A V
Sbjct: 354 PNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICV 413
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ + +N ++W S+I +G A +A+E F RM+ G++PDE+T V+SAC
Sbjct: 414 FNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLV 473
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ G Q + + L + + ++D+ + G L+EA + + MP+
Sbjct: 474 EAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPM 521
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 220/488 (45%), Gaps = 102/488 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L+ +C R + S V + K F++++F+ N + ++ G + AR++F
Sbjct: 120 DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLF 179
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ P RD SWN+++ G+ + EAL
Sbjct: 180 DES-------------------------------PVRDVVSWNTLIGGYVRSGLPREALE 208
Query: 138 YFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F ++ + A+ E + A+S CA D ++G ++H + V + +A++DM
Sbjct: 209 LFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDM 268
Query: 196 YGKCG----------RVSC---------------------ARRVFDGMRERNIVSWNSLI 224
Y KCG R+S AR +FD M ER++ WN+L+
Sbjct: 269 YVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALM 328
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y QN +A+ +F M S ++P+E+T+ +++SAC+ L A + G+ +H + R KL
Sbjct: 329 AGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKL 387
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ LG +LVDMYAKCG + +A CVF+ +P++N ++ TSM+ G A
Sbjct: 388 HLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLA-------------- 433
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+G +EA+ F+ + + P TF +L+AC + ++ G
Sbjct: 434 -----------------NHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAG 476
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
RQ + + H L E + + +ID+ + G +++ ++ M ++ D V W A+
Sbjct: 477 RQFFS--LMHAKYHL---ERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGAL 531
Query: 464 IVGCAQNG 471
C +G
Sbjct: 532 FFACRMHG 539
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/678 (35%), Positives = 367/678 (54%), Gaps = 72/678 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +C + R+VHA+ +KS+ S++ +QN L+ +Y+K
Sbjct: 141 DQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSK----------- 189
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+GL+ GF+ LF M E+D SW S+++GFAQ EAL
Sbjct: 190 ---------------SGLVADGFL-----LFGRMREKDPISWGSIIAGFAQQGCEMEALQ 229
Query: 138 YFVKMHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E +E+ FGS SAC + G Q+H+L K R + Y G +L DMY
Sbjct: 230 IFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMY 289
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+C ++ A+RVF G+ ++VSWNS+I G S+A+ + M SG+ PD +T+
Sbjct: 290 ARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVR 349
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC A + G +H+ L++ L D+ + N+L+ MYA+C + A VF
Sbjct: 350 GLLCACVGCDAIQHGRLMHSYLVKL-GLDGDVSVCNSLLSMYARCMDFSSAMDVFH---- 404
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
ET +R+VV+WN+++ Q+ E LF LL
Sbjct: 405 -----ETR----------------------DRDVVTWNSILTACVQHQHLEVVFKLFNLL 437
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+R + N+L+A A L ++ +Q HT K GL +D + N LID Y
Sbjct: 438 QRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGL------VNDTMLSNGLIDTY 491
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCGS++D ++FE M D SW+++IVG AQ+GY +AL LF +M G +P+HVT
Sbjct: 492 AKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTF 551
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACS GLV+EG Y+S M EHG+ P ++H +C++DLL RAG L EA ++ MP
Sbjct: 552 VGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMP 611
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD V+W +LLA K H ++ +G A+ +L I+PS+S YVLL N+Y+ G W E R
Sbjct: 612 FEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFAR 671
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
++K MR GV K PG SW+++ G + VF+V+D+ HP ++EIY +L+++ EM + GYVP
Sbjct: 672 LKKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGMEMIKAGYVPK 731
Query: 676 ASDDEAYEEQNGSNSTSD 693
S + A + G N SD
Sbjct: 732 LSCNHASFDLTG-NGLSD 748
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 232/486 (47%), Gaps = 40/486 (8%)
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
+N N +IT + + A +F MP ++ SW S+++ AQ+ R ++ALG F M
Sbjct: 74 RNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSM 133
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
A +++ GS + ACA D +G QVHA KS SD+ + +AL+ MY K G V
Sbjct: 134 LRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLV 193
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVSA 261
+ +F MRE++ +SW S+I + Q G +AL++F M+A G+ P+E SV SA
Sbjct: 194 ADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSA 253
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + + G QIH+ ++ +L ++ G +L DMYA+C KL
Sbjct: 254 CGVLGSLEYGEQIHSLSVK-YRLDHNSYAGCSLSDMYARCKKL----------------- 295
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+SA+ +F + ++VSWN++I + G EA+ L ++ +
Sbjct: 296 --------------ESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGL 341
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T LL AC +Q GR H+++VK GL + D+ V NSL+ MY +C
Sbjct: 342 RPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGL------DGDVSVCNSLLSMYARCMD 395
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+F +RD V+WN+++ C Q+ + LF + D +++ VL A
Sbjct: 396 FSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSA 455
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ G E ++ + K GL ++D + G LD+A L E M D
Sbjct: 456 SAELGYFEMVKQVHTCTFKV-GLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVF 514
Query: 562 IWGSLL 567
W SL+
Sbjct: 515 SWSSLI 520
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 17/262 (6%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+RN V +++ Y + ++ +SARL+F +M +N VSW ++IA + QN + +ALGLF
Sbjct: 73 VRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSS 132
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ R P + G+ + ACA L D+ +GRQ H +K S SD+ V N+L+ M
Sbjct: 133 MLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMK------SENGSDLIVQNALVTM 186
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVT 494
Y K G V DG +F M E+D +SW ++I G AQ G EAL +F++M+ G P+
Sbjct: 187 YSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFH 246
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT----CMVDLLGRAGCLDEAKTL 550
V AC G +E G + S+S ++ L DH + + D+ R L+ AK +
Sbjct: 247 FGSVFSACGVLGSLEYGEQ-IHSLSVKYRL----DHNSYAGCSLSDMYARCKKLESAKRV 301
Query: 551 IEAMPMQPDAVIWGSLLAACKV 572
+ PD V W S++ AC V
Sbjct: 302 FYGID-APDLVSWNSIINACSV 322
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/650 (34%), Positives = 354/650 (54%), Gaps = 69/650 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C SK++ + +H+ IIK + FI L+D+Y+KCG
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCG---------------- 363
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
DA +F ++ + D W+++++ Q + E++ F M
Sbjct: 364 ---------------LAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRL 408
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++Y+ S LSA + + + G +HA + K + +DV + +AL+ MY K G V
Sbjct: 409 GDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHD 468
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
++++ M +R+++SWN+ ++ G L +F M+ G P+ T S++ +C+
Sbjct: 469 GTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G Q+HA +++ + N+ V AL+DMYAKC L +
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLED------------------ 569
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
A + F ++ R++ +W +I Y Q + E+AL FR +++E V P
Sbjct: 570 -------------ADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPN 616
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+T L+ C++LA L+ G+Q H+ V K SG SD+FVG++L+DMY KCG +E+
Sbjct: 617 EFTLAGCLSGCSSLASLEGGQQLHSMVFK------SGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+FE ++ RD ++WN +I G AQNG G +AL F+ ML G PD VT G+L ACSH
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLVEEG+++F+SM ++ G++P DH CMVD+LGR G DE + I+ M + +A+IW
Sbjct: 731 QGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWE 790
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
++L A K+H N++LGE A KL E++P Y+LLSN++A GRW +V RVR LM +G
Sbjct: 791 TVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKG 850
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
V K+PGCSW+E G V+ F+ D HP +EI+L L L RE+ + YVP
Sbjct: 851 VKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVP 900
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 264/550 (48%), Gaps = 77/550 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L C +S+ + +H I+K + + L++VYAKC AR V
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVL---- 170
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
A MP+RD SW +++ G ++++ F +
Sbjct: 171 ---------------------------AKMPDRDVVSWTALIQGLVAEGFANDSIYLFQE 203
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E +E++ + L AC+ + +G Q+HA K D+++GSAL+D+Y KCG
Sbjct: 204 MQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGE 263
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F GM E+N V+WN L+ Y Q G + L++F MM ++ +E TL +V+
Sbjct: 264 IELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKG 323
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA+ K+G IH+ +++C N+ + G LVDMY+KCG +A VF +
Sbjct: 324 CANSKNLKQGQVIHSLIIKCGYEGNEFI-GCGLVDMYSKCGLAIDAIGVFKTIK------ 376
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ ++V W+ALI Q G++EE++ LF L++
Sbjct: 377 -------------------------KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +LL+A N +LQ G+ H V K+G E+D+ V N+L+ MYMK G
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGF------ETDVAVSNALVTMYMKNGC 465
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V DG +++E+MV+RD +SWNA + G G L +F ML G P+ T I +L +
Sbjct: 466 VHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGS 525
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
CS V GR+ + + K L D+ T ++D+ + L++A + ++
Sbjct: 526 CSCLFDVHYGRQVHAHIIKNQ----LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR- 580
Query: 559 DAVIWGSLLA 568
D W ++
Sbjct: 581 DLFTWTVIIT 590
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 31/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L SC V R+VHA IIK+Q F+ LID+YAKC L A F+++S
Sbjct: 519 FISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS 578
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++FTW IIT +AQ ++ +AL YF +
Sbjct: 579 VRDLFTWTVIIT-------------------------------NYAQTNQGEKALNYFRQ 607
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E +E++ LS C+ + G Q+H+++ KS + SD+++GSAL+DMY KCG
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +F+ + R+ ++WN++I Y QNG + AL F M+ GI PD VT ++SA
Sbjct: 668 MEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA 727
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ +EG + + R + + +VD+ + GK +E +M +
Sbjct: 728 CSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQL 782
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 355/637 (55%), Gaps = 69/637 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA + K F S+ F+ LID Y+ CG AR+VFD + K
Sbjct: 167 VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYK----------------- 209
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
D SW MV+ + +++ F E+L F +M F + ++F S L A
Sbjct: 210 --------------DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKA 255
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C G F +G VH K+ Y ++++G LID+Y K G V A +VF+ M + +++ W
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPW 315
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ +I Y Q+ + +A+E+F RM + P++ TLAS++ ACASL + G QIH +++
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L ++ + NAL+DMYAKCG++ +++
Sbjct: 376 V-GLDMNVFVSNALMDMYAKCGRM-------------------------------ENSLQ 403
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F++ VSWN +I GY Q G E+AL LF+ + V T T+ ++L ACA +A
Sbjct: 404 LFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAA 463
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G Q H+ VK + + + VGN+LIDMY KCG+++D +F+ + E D VSW
Sbjct: 464 LEPGSQIHSLSVK------TIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSW 517
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NAMI G + +G EAL F+ ML KPD VT +G+L ACS+AGL++ G+ YF SM +
Sbjct: 518 NAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVE 577
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
E+ + P +HYTCMV LLGR+G LD+A L+ +P +P ++W +LL+AC +H ++ LG
Sbjct: 578 EYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGR 637
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A+++LEIEP + +VLLSN+YA RWG V +R M+++G+ K+PG SWIE G V
Sbjct: 638 ISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRV 697
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ F V D HP K I +L+ L + + GYVP+ S
Sbjct: 698 HYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFS 734
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 176/556 (31%), Positives = 281/556 (50%), Gaps = 79/556 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL SC+R+ + + +H IIK ++F N L++ Y
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY----------------- 89
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K+ + DA++LF MP+R+ S+ +++ G++Q RFSEA+G F +
Sbjct: 90 --------------VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSR 135
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E L+ + F + L + K+G VHA + K + SD ++G+ALID Y CG
Sbjct: 136 LQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGY 195
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
CAR+VFD + +++VSW ++ CY +N ++L++F RM G +P+ T ASV+ A
Sbjct: 196 AECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKA 255
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L F G +H + L +L +G L+D+Y K G +++A VF+ MP +V+
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLE-ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIP 314
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ M++ YA Q+ ++EEA+ +F ++R V
Sbjct: 315 WSFMIARYA-------------------------------QSEQSEEAIEMFCRMRRGLV 343
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +T +LL ACA+L DLQLG Q H HVVK GL + ++FV N+L+DMY KCG
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGL------DMNVFVSNALMDMYAKCGR 397
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E+ ++F VSWN +IVG Q G G +AL LFK ML C + VT VL A
Sbjct: 398 MENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRA 457
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT----CMVDLLGRAGCLDEAKTLIEAMPMQ 557
C+ +E G + S K + D T ++D+ + G + +A+ L+ M +
Sbjct: 458 CAGIAALEPGSQIHSLSVK-----TIYDKNTVVGNALIDMYAKCGNIKDAR-LVFDMLRE 511
Query: 558 PDAVIWGSLLAACKVH 573
D V W ++++ VH
Sbjct: 512 HDQVSWNAMISGYSVH 527
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C ++ ++H+ +K+ + + N LID+YAKCG + AR VFD +
Sbjct: 451 YSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLR 510
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALG 137
+ +WN++I+G G +A + F SM E D+ ++ ++S +
Sbjct: 511 EHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQA 570
Query: 138 YFVKMHSE 145
YF M E
Sbjct: 571 YFKSMVEE 578
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/647 (37%), Positives = 360/647 (55%), Gaps = 100/647 (15%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
HA ++K S+ F++N +ID+YA+ G + ARK
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARK-------------------------- 151
Query: 102 DDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+F +P ER WN+MVSG+ + + +A F M N
Sbjct: 152 -----VFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN------------- 193
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
V +A++ Y K + ARR FD M ER++VS
Sbjct: 194 --------------------------VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS-----LAAFKEGLQI 274
WN++++ Y QNG A + L +F M+ +GIEPDE T +V+SAC+S LAA
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL----- 282
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKAS 333
R + ++++ + + AL+DMYAKCG + AR +FD + RN V+ +M+S Y +
Sbjct: 283 -VRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVG 341
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLL 392
++ SAR +F M RNVV+WN++IAGY QNG++ A+ LF+ ++ + + P T +++
Sbjct: 342 NLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVI 401
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG--NSLIDMYMKCGSVEDGCRIFE 450
+AC +L L+LG +RFL+ + + + N++I MY +CGS+ED R+F+
Sbjct: 402 SACGHLGALELGNWV--------VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQ 453
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M RD VS+N +I G A +G+G EA+ L M G +PD VT IGVL ACSHAGL+EE
Sbjct: 454 EMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEE 513
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
GRK F S+ P DHY CMVDLLGR G L++AK +E MPM+P A ++GSLL A
Sbjct: 514 GRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNAS 568
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
++H+ + LGE A KL E+EP NSG ++LLSN+YA GRW +V R+R+ M+K GV K G
Sbjct: 569 RIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTG 628
Query: 631 CSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+E G ++ F+V D+ H + +IY +L L ++M+ GY+ + S
Sbjct: 629 WSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 675
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/661 (34%), Positives = 366/661 (55%), Gaps = 70/661 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL SV++ R+VH+ +IK + S + + N L+D Y K L
Sbjct: 197 DHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL------- 249
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
GL A +LF +PERD ++N++++G+++ EA+
Sbjct: 250 ----------------GL--------AFQLFNDIPERDSVTFNALLTGYSKEGFNREAIN 285
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM + +E++F + L+A D + G QVH + K + +V++ +AL+D Y
Sbjct: 286 LFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYS 345
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K RV A ++F M E + +S+N L+TCY NG ++LE+F + +G + A+
Sbjct: 346 KHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFAT 405
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S A G QIH++ + + + +++++GN+LVDMYAKCG+ E
Sbjct: 406 LLSIAAISLNLDIGRQIHSQTIVTDAI-SEILVGNSLVDMYAKCGEFGE----------- 453
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A +F+ + ++ V W A+I+ Y Q G +E+ L LF ++
Sbjct: 454 --------------------ANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + T+ +++ ACA+LA L LG+Q H+H++ SG S++F G++L+DMY
Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIG------SGYISNVFSGSALVDMYA 547
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS++D ++F+ M R+ VSWNA+I AQNG G L LF++M+ G +PD V+++
Sbjct: 548 KCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLS 607
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+LCACSH GLVEEG +YF SM++ + L P K+HY +D+L R G DEA+ L+ MP +
Sbjct: 608 ILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFE 667
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRV 616
PD ++W S+L +C +H+N L + A +L ++ ++ PYV +SN+YA G W V +V
Sbjct: 668 PDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKV 727
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+K MR+RGV K P SW+EI +VF DK HP +EI L L +M + GY P++
Sbjct: 728 KKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDS 787
Query: 677 S 677
S
Sbjct: 788 S 788
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 187/385 (48%), Gaps = 40/385 (10%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+++ + +I Y K G +S AR +FD M +R V+W LI Y QN +A +F+ M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI+PD V+LA+++S + E Q+H+ +++ + LV+ N+L+D
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKL-GYDSTLVVSNSLLD-------- 241
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
Y K S+ A +F + ER+ V++NAL+ GY++ G
Sbjct: 242 -----------------------SYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
N EA+ LF ++ PT +TF +L A L D++ G+Q H VVK +
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVW------ 332
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
++FV N+L+D Y K V + ++F M E D +S+N ++ A NG E+L LFK++
Sbjct: 333 NVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQ 392
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G + +L + + ++ GR+ S ++ + + +VD+ + G
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNS-LVDMYAKCGEF 451
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAA 569
EA + + +Q +V W +++++
Sbjct: 452 GEANRIFSDLAIQ-SSVPWTAMISS 475
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 13/281 (4%)
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
S E+ + +M + I+P L + +L A K L + A +++ + N
Sbjct: 53 GSKQYELTLSLMNNIIKPCTRNLVT------TLTAPKPHLHVDASIIKT-GFNPNTYRSN 105
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
LV + + G LN AR +FD MP +N+ S +M+ GY K+ ++ AR +F M +R V+
Sbjct: 106 FLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVT 165
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W LI GY QN + EA GLF + R + P H + LL+ + RQ H+HV+
Sbjct: 166 WTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVI 225
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K G +S + V NSL+D Y K S+ ++F + ERD V++NA++ G ++ G+
Sbjct: 226 KLGY------DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGF 279
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
EA+ LF KM G +P T +L A +E G++
Sbjct: 280 NREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/671 (37%), Positives = 362/671 (53%), Gaps = 84/671 (12%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ +++T N+II+G K G I AS++F +RD SWN+M++GF F AL +
Sbjct: 30 TTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLK 89
Query: 141 KMHSENFALSEYSFGSALS--ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
M FA+ YSFGS L AC G V+ +G QVH+++ K Y +V+ GSAL+DMY K
Sbjct: 90 SMKRYGFAVDGYSFGSILKGVACVGYVE--VGQQVHSMMVKMGYEGNVFAGSALLDMYAK 147
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C RV A VF + RN V+WN+LI+ Y Q G A + M G+E D+ T A +
Sbjct: 148 CERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPL 207
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD-RMPIR 317
++ K Q+HA++++ L +D + NA++ Y++CG + +A VFD + R
Sbjct: 208 LTLLDDPDLHKLTTQVHAKIVK-HGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETR 266
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSW-------------------- 353
++V+ SM++ Y + + A +F +M E ++ ++
Sbjct: 267 DLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLH 326
Query: 354 ---------------NALIAGYTQNGEN--EEALGLFRLL-------------------- 376
N+LIA Y ++ +EAL +F L
Sbjct: 327 GLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGL 386
Query: 377 -----------KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+ + V HY F +L +C++LA LQLG+Q H V+K SG E +
Sbjct: 387 SEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLK------SGFEPN 440
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
FV +SLI MY KCG +ED + F+ + ++WN++I G AQ+G G AL LF M
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
K DH+T + VL ACSH GLVEEG + SM ++G+ P +HY CM+DLLGRAG LD
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 560
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EAK LIEAMP +PDA++W +LL AC+ +I L VA LLE+EP YVLLS+M+
Sbjct: 561 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
L RW E +++LM++RGV K PG SWIE+ V F +D+ HP +EIYL L L
Sbjct: 621 HLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELME 680
Query: 666 EMKRVGYVPNA 676
E++R+ YV N+
Sbjct: 681 EIRRLDYVANS 691
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 181/399 (45%), Gaps = 43/399 (10%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H L KS ++ +Y + +I Y KCG + A ++F +R+ VSWN++I + G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
ALE M G D + S++ A + + G Q+H+ +++ ++ G+A
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM-GYEGNVFAGSA 140
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+DMYAKC ++ +A VF + IRN V+ +++SGYA
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA----------------------- 177
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
Q G+ A L ++ E V TF LL + +L Q H +VK
Sbjct: 178 --------QVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK 229
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGY 472
HGL SD V N++I Y +CGS+ED R+F+ +E RD V+WN+M+ N
Sbjct: 230 HGL------ASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQ 283
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE--HGLAPLKDH 530
EA LF +M + G +PD T V+ A +G+ + K L P+ +
Sbjct: 284 EEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNS 343
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
M L + +DEA + E++ D V W S+L
Sbjct: 344 LIAMY-LKSHSKSMDEALNIFESLE-NKDHVSWNSILTG 380
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 205/469 (43%), Gaps = 85/469 (18%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD-KMSNKNVFTWNSIITGLL 96
T +VHA+I+K AS+ + N +I Y++CG + A +VFD + +++ TW
Sbjct: 220 TTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTW-------- 271
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
NSM++ + +++ EA F++M F Y++ S
Sbjct: 272 -----------------------NSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTS 308
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC--ARRVFDGMRE 214
+SA G +H L+ K V + ++LI MY K S A +F+ +
Sbjct: 309 VISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLEN 368
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++ VSWNS++T + Q+G + DAL+ F M + + D ++V+ +C+ LA + G Q+
Sbjct: 369 KDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQV 428
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H +++ N V ++L+ MY+KCG + +AR FD P + ++ S++ GYA
Sbjct: 429 HVLVLKSGFEPNGFV-ASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYA---- 483
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
Q+G + AL LF L+K V H TF +L A
Sbjct: 484 ---------------------------QHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA 516
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRI 448
C +H +V+ G FL ESD + +ID+ + G +++ +
Sbjct: 517 C-----------SHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL 565
Query: 449 FETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
E M E D + W ++ C G E LL E +H T +
Sbjct: 566 IEAMPFEPDAMVWKTLLGACRTCG-DIELASQVASHLLELEPEEHCTYV 613
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 144/349 (41%), Gaps = 55/349 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L SC ++ ++VH ++KS F F+ + LI +Y+KCG + ARK
Sbjct: 404 IDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKS 463
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD + WNS+I G+AQH R AL
Sbjct: 464 FDATPKDSSIAWNSLIF-------------------------------GYAQHGRGKIAL 492
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMG-TQVHALLSKSRYSSDVYMGSALIDM 195
F M L +F + L+AC+ + G + + ++ S + + +ID+
Sbjct: 493 DLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDL 552
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE-V 253
G+ GR+ A+ + + M E + + W +L+ G A +V ++ +EP+E
Sbjct: 553 LGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLE--LEPEEHC 610
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCE-----------KLRNDLVLGNA-------LV 295
T + S L + E I RLM+ +++N++ NA
Sbjct: 611 TYVLLSSMFGHLRRWNEKASIK-RLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCE 669
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
++Y + G+L E D + ++S S S Y K+ +V ++ K
Sbjct: 670 EIYLRLGELMEEIRRLDYVANSEIMSYLSGSSPYIKSGAVSVLSVLVYK 718
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
V H L SG + I+ N++I Y KCG + ++F +RD VSWN MI G G
Sbjct: 20 VNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLG 79
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
AL K M G D + +L + G VE G++ S M K G
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVK-MGYEGNVFAG 138
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ ++D+ + +++A + +++ ++ ++V W +L++
Sbjct: 139 SALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISG 175
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 368/679 (54%), Gaps = 80/679 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++ + +L C KS++D ++VH+ I + + + +L+ YA CG L R+V
Sbjct: 97 LETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRV 156
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFI--------------------DDASRLFASMPERDQ 116
FD M KNV+ WN +++ K G + AS LF + +RD
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDV 216
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SWNSM+SG+ + LG + +M + + S L CA S +G VH+L
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
KS + + + L+DMY KCG + A RVF+ M ERN+VSW S+I Y ++G + A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGA 336
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+ + +M G++ D V + S++ ACA + G +H ++ + ++L + NAL+D
Sbjct: 337 IILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DYIKANNMASNLFVCNALMD 395
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAKCG S++ A +F+ M+ ++++SWN +
Sbjct: 396 MYAKCG-------------------------------SMEGANSVFSTMVVKDIISWNTM 424
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
+ GE LK P T +L ACA+L+ L+ G++ H +++++G
Sbjct: 425 V------GE----------LK-----PDSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
SD V N+L+D+Y+KCG + +F+ + +D VSW MI G +GYG EA
Sbjct: 464 ------SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ F +M G +PD V+ I +L ACSH+GL+E+G ++F M + + P +HY CMVD
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LL R G L +A IE +P+ PDA IWG+LL C+++ +I L E VA+++ E+EP N+G
Sbjct: 578 LLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGY 637
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV-KDKRHPLNKE 655
YVLL+N+YAE + EV R+R+ + K+G+ K PGCSWIEI G VN+F+ + HP +K+
Sbjct: 638 YVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKK 697
Query: 656 IYLVLKMLTREMKRVGYVP 674
I +LK + R+MK GY P
Sbjct: 698 IESLLKKMRRKMKEEGYFP 716
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 190/386 (49%), Gaps = 35/386 (9%)
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+ + +N+ I + Q G +A+E+ S +E T SV+ CA L + +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGKK 120
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H+ +++ + D LG LV YA CG L E R VFD M +NV MVS YAK
Sbjct: 121 VHS-IIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 334 SVK--------------------SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
K SA +F K+ +R+V+SWN++I+GY NG E LG++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + + T ++L CAN L LG+ H+ +K S E I N+L+
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK------SSFERRINFSNTLL 293
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG ++ R+FE M ER+ VSW +MI G ++G+ A+ L ++M G K D V
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVV 353
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLI 551
+ +L AC+ +G ++ G+ + + + L + C ++D+ + G ++ A ++
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIKANNMASNL---FVCNALMDMYAKCGSMEGANSVF 410
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIM 577
M ++ D + W +++ K M
Sbjct: 411 STMVVK-DIISWNTMVGELKPDSRTM 435
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 381/697 (54%), Gaps = 57/697 (8%)
Query: 39 RRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGL 95
R +HAR++ S + RLI +Y G L A +F ++ S++
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFR--ADPCPVAATSLVAAY 98
Query: 96 LKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEY 152
G + A F ++P+ RD N+++S +A+ + A+ F + S + +Y
Sbjct: 99 AAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDY 158
Query: 153 SFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC----------- 199
SF + LSA ++ + Q+ + KS + + +AL+ +Y KC
Sbjct: 159 SFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARK 218
Query: 200 -----------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
G V AR VF+ + + V WN++I+ Y +G +A
Sbjct: 219 VLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEA 278
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK---LRNDLVLGNA 293
E+F RM+ + DE T SV+SACA+ F G +H ++ R + L + NA
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNA 338
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
LV +Y+KCG + AR +FD M ++VVS +++SGY ++S + A +F +M +N +SW
Sbjct: 339 LVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSW 398
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+++GY G +E+AL LF ++ E V P YT+ ++AC L L+ G+Q H H+V+
Sbjct: 399 MVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQ 458
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G E GN+LI MY +CG+V++ +F M D VSWNAMI Q+G+G
Sbjct: 459 LGF------EGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EAL LF +M+ G PD ++ + VL AC+H+GLV+EG +YF SM ++ G+ P +DHYT
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTR 572
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
++DLLGRAG + EA+ LI+ MP +P IW ++L+ C+ ++ LG + A +L ++ P +
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQH 632
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
G Y+LLSN Y+ GRW + RVRKLMR RGV K+PGCSWIE V+VF+V D +HP
Sbjct: 633 DGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEA 692
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQN 686
++Y L+M+ M+++GYVP+ D E +++++
Sbjct: 693 HKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEH 729
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 229/501 (45%), Gaps = 90/501 (17%)
Query: 18 DSSPFAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG--- 72
D F LL + L + SV ++ ++KS + + N L+ +Y KC L
Sbjct: 156 DDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRD 215
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARKV D+M +K+ TW +++ G ++ G + A +F + + WN+M+SG+
Sbjct: 216 ARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMV 275
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS----SDVYM 188
EA F +M E L E++F S LSACA + F G VH +++ + + + + +
Sbjct: 276 VEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPV 335
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN------------------ 230
+AL+ +Y KCG ++ ARR+FD M+ +++VSWN++++ Y ++
Sbjct: 336 NNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395
Query: 231 -------------GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
G + DAL++F RM A ++P + T A +SAC L + K G Q+H
Sbjct: 396 LSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGH 455
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
L++ GNAL+ MYA+CG + EA +F MP + VS
Sbjct: 456 LVQL-GFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVS---------------- 498
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
WNA+I+ Q+G EAL LF + E + P +F +L AC
Sbjct: 499 ---------------WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC-- 541
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESD--IFVGNS----LIDMYMKCGSVEDGCRIFET 451
H+ +V G ++ + D I G LID+ + G + + + +T
Sbjct: 542 ---------NHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKT 592
Query: 452 M-VERDWVSWNAMIVGCAQNG 471
M E W A++ GC +G
Sbjct: 593 MPFEPTPSIWEAILSGCRTSG 613
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 6/319 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASE--IFIQNRLIDV 63
+++V + LD F +L +C + + + VH +I + Q F E + + N L+ +
Sbjct: 283 RRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTL 342
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+KCG + AR++FD M +K+V +WN+I++G ++ +D A +F MP +++ SW MV
Sbjct: 343 YSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402
Query: 124 SGFAQHDRFSE-ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
SG+ H FSE AL F +M +E+ +Y++ A+SAC K G Q+H L + +
Sbjct: 403 SGYV-HGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGF 461
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
G+ALI MY +CG V A +F M + VSWN++I+ Q+G +ALE+F R
Sbjct: 462 EGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR 521
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+A GI PD ++ +V++AC EG Q + R + L+D+ + G
Sbjct: 522 MVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAG 581
Query: 303 KLNEARCVFDRMPIRNVVS 321
++ EAR + MP S
Sbjct: 582 RIGEARDLIKTMPFEPTPS 600
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/521 (43%), Positives = 323/521 (61%), Gaps = 9/521 (1%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F L ACA ++ G A + + SDV++ +A G + ARR+FD
Sbjct: 127 TFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRS 186
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTLASVVSACASLAAFKE 270
R++VSWN+LI Y + G ++ALE+F RM+A + PDEVT+ + VS C + +
Sbjct: 187 PVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLEL 246
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G ++H + + + + L NAL+DMY KCG L A+ VF+R+ R VVS T+M+ G+A
Sbjct: 247 GRRLHG-FVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFA 305
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K + AR +F +M ER+V WNAL+ GY Q + +EAL LF ++ SV P T N
Sbjct: 306 KFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVN 365
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL AC+ L L++G H ++ KH L F + +G SLIDMY KCG++E IF+
Sbjct: 366 LLTACSQLGALEMGMWVHRYIEKHRLVF------SVALGTSLIDMYAKCGNIEKAIHIFK 419
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ E++ ++W AMI G A +G+ EA+ F+ M+ G+KPD +T IGVL AC HAGLV+E
Sbjct: 420 EIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKE 479
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
GR++FS M ++ L HY+CM+DLLGRAG LDEA+ L+ MPM+PDAV+WG++ AC
Sbjct: 480 GREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFAC 539
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
++ NI LGE A KL+EI+PS+SG YVLL+NMYAE + +VR +MR GV K PG
Sbjct: 540 RMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPG 599
Query: 631 CSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
CS IE+ G V+ F+VKDK H + IY L +T ++K
Sbjct: 600 CSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKHTA 640
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 160/288 (55%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
C + + + RR+H + + + + N L+D+Y KCG L A+ VF+++ ++ V +W
Sbjct: 238 CGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSW 297
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I G K+G +DDA ++F MPERD WN++++G+ Q + EAL F +M +
Sbjct: 298 TTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVV 357
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
E + + L+AC+ +MG VH + K R V +G++LIDMY KCG + A +
Sbjct: 358 PDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHI 417
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F + E+N ++W ++I +G A++A+E F M+ G +PDE+T V+SAC
Sbjct: 418 FKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLV 477
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
KEG + + + L + + ++D+ + G L+EA + + MP+
Sbjct: 478 KEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPM 525
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 196/430 (45%), Gaps = 83/430 (19%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +VF N+ L G ++DA RLF P RD SWN+++ G+ + +EAL F +
Sbjct: 157 DSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWR 216
Query: 142 MHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M +E+ + E + +A+S C D ++G ++H + S V + +AL+DMY KC
Sbjct: 217 MVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKC 276
Query: 200 GRVSC-------------------------------ARRVFDGMRERNIVSWNSLITCYE 228
G + AR+VFD M ER++ WN+L+T Y
Sbjct: 277 GSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYV 336
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q +AL +F M + + PDE+T+ ++++AC+ L A + G+ +H R + +L +
Sbjct: 337 QCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVH-RYIEKHRLVFSV 395
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
LG +L+DMYAKCG + +A +F +P +N ++ T+M+ G A
Sbjct: 396 ALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLA------------------ 437
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+G EA+ FR + P TF +L+AC H
Sbjct: 438 -------------NHGHANEAIEHFRTMIELGQKPDEITFIGVLSAC-----------CH 473
Query: 409 THVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWN 461
+VK G F S E+ + +ID+ + G +++ ++ TM +E D V W
Sbjct: 474 AGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWG 533
Query: 462 AMIVGCAQNG 471
A+ C G
Sbjct: 534 AIFFACRMQG 543
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 165/376 (43%), Gaps = 70/376 (18%)
Query: 230 NGPASDALEVFVRMMASGI-EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
+G L ++ ++ SG PD +T ++ ACA L + G A ++R L +D+
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRL-GLDSDV 160
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ NA + G + +AR +FDR P+R++VS +++ GY + + A +F +M+
Sbjct: 161 FVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAE 220
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+ V V P T ++ C + DL+LGR+ H
Sbjct: 221 DAV-----------------------------VRPDEVTMIAAVSGCGQMRDLELGRRLH 251
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE------------------------- 443
V G+ + + N+L+DMY+KCGS+E
Sbjct: 252 GFVDSDGV------SCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFA 305
Query: 444 ------DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
D ++F+ M ERD WNA++ G Q EAL LF +M PD +TM+
Sbjct: 306 KFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVN 365
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACS G +E G + ++H L T ++D+ + G +++A + + +P +
Sbjct: 366 LLTACSQLGALEMG-MWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIP-E 423
Query: 558 PDAVIWGSLLAACKVH 573
+A+ W +++ H
Sbjct: 424 KNALTWTAMICGLANH 439
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL +C + ++ VH I K + + + LID+YAKCG + A +F
Sbjct: 359 DEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIF 418
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ KN TW ++I GL A H +EA+
Sbjct: 419 KEIPEKNALTWTAMICGL-------------------------------ANHGHANEAIE 447
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDM 195
+F M E +F LSAC + K G + +L+ +++Y + M S +ID+
Sbjct: 448 HFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLM-ETKYHLERKMKHYSCMIDL 506
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPAS 234
G+ G + A ++ + M E + V W ++ G S
Sbjct: 507 LGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNIS 546
>gi|224082372|ref|XP_002306667.1| predicted protein [Populus trichocarpa]
gi|222856116|gb|EEE93663.1| predicted protein [Populus trichocarpa]
Length = 630
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/655 (36%), Positives = 371/655 (56%), Gaps = 43/655 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S ++ L+D C KS+S R HA++IK F+ NR +D+Y++ G + A KVFD
Sbjct: 17 SYYSYLIDHCFSLKSLSFARITHAQLIKVGLNRHTFLGNRCLDLYSQFGNVNDALKVFDD 76
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+S+KN+ +WN + GLLK+ + A +F MPERD SWNSM+SG+A F AL F
Sbjct: 77 ISSKNIVSWNICLKGLLKFDNLSLACSVFDDMPERDVVSWNSMISGYASRGYFDCALETF 136
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMYGK 198
+M SE+++ +S G + G ++H + +S + +V +G++LIDMYGK
Sbjct: 137 WEMQKLGVRPSEFTYSILMSVVFG---VRHGKEIHGSIVRSGLGALNVVLGNSLIDMYGK 193
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
+ A VF M E +++SWNSLI+ Q+G AL+ F M + G PDE +++ V
Sbjct: 194 FSSLDYALGVFLTMEELDVISWNSLISVCCQSGYPELALDKFCIMRSLGYSPDEFSVSVV 253
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+++C +L ++G QI A ++ L N ++ +A +D+++KC +L ++ +F+ +
Sbjct: 254 ITSCLNLRNLEKGKQIFALCVKVGFLCNTII-SSATIDLFSKCNRLEDSVRLFEEQDQWD 312
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
SM+S YA+ G E+ L LF L +
Sbjct: 313 SAVCNSMISSYARC-------------------------------GFREDGLRLFVLTLK 341
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ + PT +T ++L++ ++ L+ G Q H+ VK GL E D V +SL++MY K
Sbjct: 342 KDIRPTEFTLSSVLHS-TSILKLEQGTQFHSLAVKSGL------ELDAIVASSLVEMYSK 394
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ +IF MV RD ++WN MI+G NG EAL FK+++ G PD +T+ GV
Sbjct: 395 FGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAGV 454
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS G + EG FSSM + +G+ P +HY C VDLL +AG LDEA + E+MP +P
Sbjct: 455 LLACSFGGFISEGMTVFSSMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESMPYEP 514
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
++IW S+L AC +H ++ L E VA++L+E+EP +S PY++L+ M+ G+W VVRV+K
Sbjct: 515 VSLIWESILHACLIHGDLKLSERVAERLMELEPQSSLPYLVLARMFEIRGQWEGVVRVKK 574
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
M++ V K GCSWI + V F +H KEIYLVL++L E + GY+
Sbjct: 575 AMKRGKVEKVIGCSWIGVKNQVYTFTADQLQHHRGKEIYLVLRLLNWETEAKGYL 629
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 153/330 (46%), Gaps = 38/330 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ SCL +++ +++ A +K F I + ID+++KC L + ++F
Sbjct: 246 DEFSVSVVITSCLNLRNLEKGKQIFALCVKVGFLCNTIISSATIDLFSKCNRLEDSVRLF 305
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + NS+I+ + GF +D RLF ++D
Sbjct: 306 EEQDQWDSAVCNSMISSYARCGFREDGLRLFVLTLKKD---------------------- 343
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+E++ S L + + + + GTQ H+L KS D + S+L++MY
Sbjct: 344 ---------IRPTEFTLSSVLHSTS-ILKLEQGTQFHSLAVKSGLELDAIVASSLVEMYS 393
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + C+ ++F+ M R++++WN++I NG +AL+ F ++ +G+ PD +TLA
Sbjct: 394 KFGFIDCSIKIFNKMVARDLIAWNTMIMGLTHNGRVFEALQTFKELIRTGLPPDRITLAG 453
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ EG+ + + + ++ VD+ + G+L+EA V + MP
Sbjct: 454 VLLACSFGGFISEGMTVFSSMEERYGVKPSNEHYACFVDLLCQAGRLDEALYVAESMPYE 513
Query: 318 NV------VSETSMVSGYAKASSVKSARLM 341
V + ++ G K S + RLM
Sbjct: 514 PVSLIWESILHACLIHGDLKLSERVAERLM 543
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/640 (36%), Positives = 345/640 (53%), Gaps = 70/640 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +H ++ + S+I + L+ +YAKCG A+++F W
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF--------------------W 388
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + RD +W+++++ Q EAL F +M ++ + + S L
Sbjct: 389 G-----------LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
ACA K+G +H K+ SD+ G+AL+ MY KCG + A F+ M R+IV
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WNSLI Y Q G +A+++F ++ S I PD T+ VV ACA L +G IH +
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ +D + NAL+DMYAKCG S+ SA
Sbjct: 558 VKL-GFESDCHVKNALIDMYAKCG-------------------------------SLPSA 585
Query: 339 RLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
+F K ++ V+WN +IA Y QNG +EA+ F ++ E+ P TF ++L A A
Sbjct: 586 EFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAY 645
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
LA + G H +++ G FLS + VGNSLIDMY KCG ++ ++F M +D
Sbjct: 646 LAAFREGMAFHACIIQMG--FLS----NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT 699
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSWNAM+ G A +G+G A+ LF M + D V+ + VL AC HAGLVEEGRK F S
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 759
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
MS ++ + P +HY CMVDLLGRAG DE I+ MP++PDA +WG+LL +C++H N+
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 819
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LGE L+++EP N +V+LS++YA+ GRW + + R M G+ K PGCSW+E+
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 879
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+ F V DK HP + ++L+ L +M+++GYVP+ S
Sbjct: 880 NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRS 919
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 260/536 (48%), Gaps = 74/536 (13%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R +H + + F+S + N LID+Y+KCG
Sbjct: 250 RSIHGYVFRRDFSSAV--SNGLIDLYSKCGD----------------------------- 278
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+D A R+F M ++D SW +M++G+A + F E L F KM N +++ S SA
Sbjct: 279 --VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
A A ++D + G ++H + R SD+ + + L+ MY KCG A+++F G++ R++V
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+W+++I Q G +AL +F M ++P+ VTL S++ ACA L+ K G IH
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + + +DL G ALV MYAKCG A F+RM R++V+ S+++GYA
Sbjct: 457 VKAD-MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYA-------- 507
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
Q G+ A+ +F L+ ++ P T ++ ACA L
Sbjct: 508 -----------------------QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDW 457
DL G H +VK G ESD V N+LIDMY KCGS+ +F +T +D
Sbjct: 545 NDLDQGTCIHGLIVKLGF------ESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDE 598
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V+WN +I QNG+ EA+ F +M L P+ VT + VL A ++ EG + +
Sbjct: 599 VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHAC 658
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + G ++D+ + G LD ++ L M + D V W ++L+ VH
Sbjct: 659 II-QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSGYAVH 712
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 259/558 (46%), Gaps = 84/558 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C + ++ + H I + ++FI L+D+Y+K G L AR+VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM ++V WN++I GL + D C EA+
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQ---------------SEDPC----------------EAVD 216
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F M S S + + ++ +H + + +SS V G LID+Y
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYS 274
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V ARRVFD M +++ VSW +++ Y NG + LE+F +M + ++V+ S
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
A A ++G +IH ++ +++ +D+++ L+ MYAKCG+
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQ-QRIDSDILVATPLMVMYAKCGE-------------- 379
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ A+ +F + R++V+W+A+IA Q G EEAL LF+ ++
Sbjct: 380 -----------------TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA+L+ L+LG+ H VK + +SD+ G +L+ MY
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM------DSDLSTGTALVSMYA 476
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG F M RD V+WN++I G AQ G A+ +F K+ L PD TM+G
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGL-APLKDHYTC-----MVDLLGRAGCLDEAKTLI 551
V+ AC+ +++G + HGL L C ++D+ + G L A+ L
Sbjct: 537 VVPACALLNDLDQG-------TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 552 EAMPMQPDAVIWGSLLAA 569
D V W ++AA
Sbjct: 590 NKTDFTKDEVTWNVIIAA 607
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 206/445 (46%), Gaps = 70/445 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + + +H +K+ S++ L+ +YAKCG A F++MS+++
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ TWNS+I +G+AQ A+ F K+
Sbjct: 496 IVTWNSLI-------------------------------NGYAQIGDPYNAIDMFYKLRL 524
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + ACA D GT +H L+ K + SD ++ +ALIDMY KCG +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 205 ARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A +F+ ++ V+WN +I Y QNG A +A+ F +M P+ VT SV+ A A
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
LAAF+EG+ HA +++ L N LV GN+L+DMYAKCG+L+ + +F+ M ++ VS
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLV-GNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWN 703
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M+SGYA +G + A+ LF L++ V
Sbjct: 704 AMLSGYA-------------------------------VHGHGDRAIALFSLMQESQVQI 732
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+F ++L+AC + ++ GR+ + H + + D+ ++D+ + G +
Sbjct: 733 DSVSFVSVLSACRHAGLVEEGRK-----IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 444 DGCRIFETM-VERDWVSWNAMIVGC 467
+ + M VE D W A++ C
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSC 812
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ +C + +H I+K F S+ ++N LID+YAKCG L A +F
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+K K+ TWN II + + Q+ EA+
Sbjct: 590 NKTDFTKDEVTWNVII-------------------------------AAYMQNGHAKEAI 618
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M ENF + +F S L A A F+ G HA + + + S+ +G++LIDMY
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG++ + ++F+ M ++ VSWN++++ Y +G A+ +F M S ++ D V+
Sbjct: 679 AKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC +EG +I + ++ DL +VD+ + G +E MP+
Sbjct: 739 SVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798
Query: 317 RNVVSETSMVSGYAKA-SSVKSARLM---FTKMLERNVVSWNALIAGYTQNGENEEA 369
+ G + S+VK + K+ RN + L + Y Q+G +A
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 855
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F +L + + + HA II+ F S + N LID+YAKCG L + K+F
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 691
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
++M +K+ +WN++++G G D A LF+ M E D S+ S++S
Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVE 751
Query: 134 EALGYFVKMHSENFA---LSEYSFGSALSACAGSVDFKMG-TQVH----------ALLSK 179
E F M + L Y+ L AG D +G +V ALL
Sbjct: 752 EGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
R S+V +G +D K + RN + L + Y Q+G +DA +
Sbjct: 812 CRMHSNVKLGEVALDHLVK-------------LEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
+M G++ + S V + AF+ G + H +L E + +L N L++
Sbjct: 859 RSKMNDLGLK--KTPGCSWVELKNKVHAFRVGDKSHPQL---ESMH---LLWNTLLEKME 910
Query: 300 KCGKLNEARCVF 311
K G + + CV
Sbjct: 911 KIGYVPDRSCVL 922
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/726 (33%), Positives = 376/726 (51%), Gaps = 109/726 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA------------------------- 51
L + + +L C KS+ D +RVH+ II + +
Sbjct: 92 LGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKI 151
Query: 52 ------SEIFIQNRLIDVYAKCGCLYGARKVFDKMSN----KNVFTW------------- 88
++F+ N L+ YAK G + +F KM N +T+
Sbjct: 152 FDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKV 211
Query: 89 ----------------------NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
NS+I K+G ++ A LF + E D SWNSM++G
Sbjct: 212 KECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGC 271
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+ L F++M + + S L ACA + +G +H K+ +S +V
Sbjct: 272 VVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEV 331
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ L+DMY KCG ++ A VF M + IVSW S+I Y + G SDA+ +F M +
Sbjct: 332 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSK 391
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G+ PD T+ S+V ACA ++ +G +H+ +++ + ++L + NAL++MYAKCG
Sbjct: 392 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCG---- 446
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
SV+ ARL+F+K+ +++VSWN +I GY+QN
Sbjct: 447 ---------------------------SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLP 479
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EAL LF ++++ P T +L ACA LA L GR+ H H+++ G SD+
Sbjct: 480 NEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF------SDL 532
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V +L+DMY KCG + +F+ + ++D +SW MI G +G+G EA+ F +M +
Sbjct: 533 HVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIA 592
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G +PD + +L ACSH+GL+ EG K+F+SM E G+ P +HY C+VDLL R G L +
Sbjct: 593 GIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSK 652
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A IE+MP++PD IWG LL+ C++H ++ L E VA+ + E+EP N+ YV+L+N+YAE
Sbjct: 653 AYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAE 712
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
+W EV ++RK M+KRG + PGCSWIE+ G N+F+ + +HP K+I ++L LT +
Sbjct: 713 AEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQ 772
Query: 667 MKRVGY 672
M+ Y
Sbjct: 773 MQNEDY 778
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 211/450 (46%), Gaps = 42/450 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+ ++ F + A+ K S+++ L S+ S L CA + G +VH+++
Sbjct: 65 NAKINKFCEMGDLRNAIELLTK--SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ S D +G+ L+ MY CG + R++FD + + WN L++ Y + G +++ +
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F +M G+ + T V+ A+L KE ++H +++ N V+ N+L+ Y
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV-NSLIAAYF 241
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
K G + A +FD + +VV SWN++I G
Sbjct: 242 KFGGVESAHNLFDELSEPDVV-------------------------------SWNSMING 270
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
NG + L +F + V T ++L ACAN+ +L LGR H VK
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACF--- 327
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
++ N+L+DMY KCG++ +F M + VSW ++I + G ++A+GL
Sbjct: 328 ---SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGL 384
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F +M G +PD T+ ++ AC+ + +++GR S + K +G+ ++++
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYA 443
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ G ++EA+ + +P++ D V W +++
Sbjct: 444 KCGSVEEARLVFSKIPVK-DIVSWNTMIGG 472
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/662 (35%), Positives = 373/662 (56%), Gaps = 43/662 (6%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
H + IKS F IF+ N+LI YAK G L A+K+FD+M +NVF+WN+II +K +
Sbjct: 434 HLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNL 493
Query: 102 DDASRLFASMPERDQCSWNSMVSGFAQHDRFS-EALGYFVKMHS--ENFALSEYSFGSAL 158
A LF S +D ++NSM+SG+A+ D + +ALG+F++M + + + E++ + L
Sbjct: 494 RQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITML 553
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG------- 211
+ A G Q+H+ + K+ V+ S+LIDMY KCG A RV+ G
Sbjct: 554 NLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDS 613
Query: 212 --------------------------MRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+ + ++V+WN++I+ + QNG ++L++FVRM
Sbjct: 614 VSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMAD 673
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ +E T ASV+SAC++L + K G ++HA +++ + N + + LVD+Y KC +
Sbjct: 674 EKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFIC-SGLVDVYCKCNNMR 732
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A V + ++NV S TSM+ GY+ ++ AR +F + E+N V W AL GY + +
Sbjct: 733 YAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQ 792
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
E L ++E+ P +++ ACA A L G+Q H+++++ G++ D
Sbjct: 793 CEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKL------D 846
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ +SL+DMY KCGS+ RIF + ++D + +N MI G A +G+ EA+ LFK+M+
Sbjct: 847 TKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVK 906
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KPD +T + +L AC H GLVE G +F SMS ++ + P DHY CM+DL GRA LD
Sbjct: 907 HGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLD 966
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A + +P+Q DAVIWG+ L AC+++ N L +LL IE N YV L+N+YA
Sbjct: 967 KALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYA 1026
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
G W E+ R+RK M+ + V K GCSW+ + +VF+ D+ H N+ IY L LT
Sbjct: 1027 AEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLTD 1086
Query: 666 EM 667
E+
Sbjct: 1087 EL 1088
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 225/509 (44%), Gaps = 95/509 (18%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q D+ +D +L+ + +S +++H+ ++K+ +F + LID+Y+KCG
Sbjct: 536 QTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCG 595
Query: 69 CL-------YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLF-ASMPERDQCSWN 120
YG +V D +S N+++ + G ID A LF + + D +WN
Sbjct: 596 FFKEACRVYYGCGEVVDSVSR------NAMVAACCREGEIDVALDLFWKELEQNDVVAWN 649
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+M+SGF Q+ E+L FV+M E +E++F S LSAC+ K+G +VHA + K+
Sbjct: 650 TMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKN 709
Query: 181 RYSSDVYMGSALIDMYGKC-------------------------------GRVSCARRVF 209
R ++ ++ S L+D+Y KC G ++ AR++F
Sbjct: 710 RLIANPFICSGLVDVYCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLF 769
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D + E+N V W +L Y + E+ PD + L S++ ACA AA
Sbjct: 770 DSLDEKNSVVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALV 829
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G QIH+ ++R ++ D L ++LVDMY+KCG + A +F R V + S++
Sbjct: 830 PGKQIHSYMLRA-GIKLDTKLTSSLVDMYSKCGSIIYAERIF-----REVTDKDSII--- 880
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
+N +IAGY +G EA+ LF+ + + P TF
Sbjct: 881 -----------------------YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFV 917
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVE 443
LL+AC H +V+ G F +D + +ID+Y + ++
Sbjct: 918 ALLSAC-----------RHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLD 966
Query: 444 DGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ ++ D V W A + C NG
Sbjct: 967 KALEFMRKIPIQLDAVIWGAFLNACRING 995
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 249/562 (44%), Gaps = 120/562 (21%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
K G H KS ++ ++M + LI Y K G ++ A+++FD M ERN+ SWN++I
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAA 486
Query: 227 Y--------------------------------EQNGPASDALEVFVRMMASG--IEPDE 252
Y +G AL F+ M + I DE
Sbjct: 487 YVKSQNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDE 546
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL--GNALVDMYAKCGKLNEA-RC 309
TL ++++ A L G Q+H+ ++ K NDL + ++L+DMY+KCG EA R
Sbjct: 547 FTLITMLNLTAKLCVISYGKQLHSFML---KTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN-VVSWNALIAGYTQNGENEE 368
+ + + VS +MV+ + + A +F K LE+N VV+WN +I+G+ QNG EE
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+L LF + E V +TF ++L+AC+NL L+LG++ H +V+K+ L ++ F+
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLI------ANPFI 717
Query: 429 GNSLIDMYMKC-------------------------------GSVEDGCRIFETMVERDW 457
+ L+D+Y KC G++ + ++F+++ E++
Sbjct: 718 CSGLVDVYCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNS 777
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V W A+ G + L + + PD + +I ++ AC+ + G++ S
Sbjct: 778 VVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSY 837
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCL-------------------------------DE 546
M + G+ + +VD+ + G + +E
Sbjct: 838 MLRA-GIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENE 896
Query: 547 AKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL---LEIEPSNSGPYVLL 600
A L + M +PDA+ + +LL+AC+ + LGE+ + I P Y +
Sbjct: 897 AVQLFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDH-YACM 955
Query: 601 SNMYAELGRWGEVVRVRKLMRK 622
++Y GR ++ + + MRK
Sbjct: 956 IDLY---GRANQLDKALEFMRK 974
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/649 (35%), Positives = 355/649 (54%), Gaps = 40/649 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++F M K+V ++ +++ L+K G + DA L+
Sbjct: 146 AASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYER 205
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M+SGF +++ +A F KM + + + + + AC G+ +F +
Sbjct: 206 CPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLA 265
Query: 171 TQVHALLSKSRYSS--------------------------------DVYMGSALIDMYGK 198
V L K DV +AL+D+Y
Sbjct: 266 MGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAD 325
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M RN VSW +LI +EQ G ++AL+++ +M+A G P+ +SV
Sbjct: 326 LGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSV 385
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA+L + G +IHA ++ N L + ++L+DMY KC + A+ VF+ +P +N
Sbjct: 386 LSACATLQDLRGGTRIHANALKMGSSTN-LFVSSSLIDMYCKCKQCTYAQRVFNSLPEKN 444
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V S++SGY+ + A +F KM RN VSWN +I+GY +N +AL F +
Sbjct: 445 TVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLA 504
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P T ++L ACANL L++GR H +VK G+ E +IF+G +L DMY K
Sbjct: 505 SGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGI------EDNIFMGTALSDMYAK 558
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M E++ ++W AM+ G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 559 SGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAI 618
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF +M + HG+ P HYTCMVD+L RAGCL EA+ L+ + +
Sbjct: 619 LFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSEL 677
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D W SLL+AC +RN +GE AKKL E+E N+ YVLLSNMYA G+W + R
Sbjct: 678 DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRI 737
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
LM+ + K GCSW+++ G + F ++HPL+ EIY +L +L E+
Sbjct: 738 LMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLMLEL 786
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 229/464 (49%), Gaps = 77/464 (16%)
Query: 50 FASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFA 109
F I + N LI +Y + G A +VFD M ++V +W +++ G + A R+
Sbjct: 278 FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLD 337
Query: 110 SMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM 169
+MP R++ SW ++++ Q +EAL + +M ++ + F S LSACA D +
Sbjct: 338 AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRG 397
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
GT++HA K S+++++ S+LIDMY KC + + A+RVF+ + E+N V WNSLI+ Y
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSW 457
Query: 230 NG------------PA-------------------SDALEVFVRMMASGIEPDEVTLASV 258
NG PA DAL F M+ASG P E+TL+SV
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACA+L + + G +HA +++ + +++ +G AL DMYAK G L+ +R VF +MP +N
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKL-GIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKN 576
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVV----SWNALIAGYTQNGENEEALGLFR 374
++ T+MV G A+ + + +F M+E + ++ A++ + G E+A+ F
Sbjct: 577 NITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFE 636
Query: 375 LLKRESVCP--THYT------------------------------FGNLLNACANLADLQ 402
++ + P HYT + +LL+AC+ + +
Sbjct: 637 TMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKE 696
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI-DMYMKCGSVEDG 445
+G +A + H L E D G L+ +MY CG +D
Sbjct: 697 IGERAAKKL--HEL------EKDNTAGYVLLSNMYASCGKWKDA 732
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 167/300 (55%), Gaps = 3/300 (1%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R+HA +K ++ +F+ + LID+Y KC
Sbjct: 369 QMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCK 428
Query: 69 -CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
C Y A++VF+ + KN WNS+I+G G + +A LF MP R+ SWN+M+SG+A
Sbjct: 429 QCTY-AQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYA 487
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
++ RF +AL YF M + E + S L ACA +MG VHA + K +++
Sbjct: 488 ENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIF 547
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
MG+AL DMY K G + +RRVF M E+N ++W +++ +NG A +++ +F M+ +G
Sbjct: 548 MGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENG 607
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I P+E T +++ AC+ ++ + + M+ + +VD+ A+ G L EA
Sbjct: 608 IAPNEHTFLAILFACSHCGLVEQAIH-YFETMQAHGIPPKSKHYTCMVDVLARAGCLPEA 666
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 358/659 (54%), Gaps = 68/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A L+ + R+K ++ +++HA +I+ F+ N +++Y+KCG L
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGEL------- 126
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +LF M +R+ SW S+++GFA + RF EAL
Sbjct: 127 ------------------------DYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALS 162
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E ++++ S L AC + GTQVH L+ K + ++++GS L DMY
Sbjct: 163 SFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYS 222
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S A + F+ M ++ V W S+I + +NG AL +++M+ + D+ L S
Sbjct: 223 KCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCS 282
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SAC++L A G +HA +++ + +GNAL DMY+K G + A VF
Sbjct: 283 TLSACSALKASSFGKSLHATILKL-GFEYETFIGNALTDMYSKSGDMVSASNVFQ----- 336
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +S +VS A+I GY + + E+AL F L+
Sbjct: 337 ---IHSDCIS----------------------IVSLTAIIDGYVEMDQIEKALSTFVDLR 371
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P +TF +L+ ACAN A L+ G Q H VVK + D FV ++L+DMY
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFK------RDPFVSSTLVDMYG 425
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + ++F+ + D ++WN ++ +Q+G G A+ F M+ G KP+ VT +
Sbjct: 426 KCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVN 485
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L CSHAG+VE+G YFSSM K +G+ P ++HY+C++DLLGRAG L EA+ I MP +
Sbjct: 486 LLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFE 545
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ W S L ACK+H ++ ++ A KL+++EP NSG +VLLSN+YA+ +W +V +R
Sbjct: 546 PNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLR 605
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K+++ + K PG SW++I +VF V+D HP KEIY L L ++KR+GYVP
Sbjct: 606 KMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQT 664
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 160/340 (47%), Gaps = 31/340 (9%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
++V D F+D L +C K+ S + +HA I+K F E FI N L D+Y+K G
Sbjct: 267 KMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSG 326
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
D +S NVF +S ++ S +++ G+ +
Sbjct: 327 ---------DMVSASNVFQIHSDCISIV---------------------SLTAIIDGYVE 356
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
D+ +AL FV + +E++F S + ACA + G+Q+H + K + D ++
Sbjct: 357 MDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFV 416
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
S L+DMYGKCG + ++FD + + ++WN+L+ + Q+G +A+E F M+ G+
Sbjct: 417 SSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGL 476
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+P+ VT +++ C+ ++GL + + + + + ++D+ + GKL EA
Sbjct: 477 KPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAE 536
Query: 309 CVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ MP NV S + ++ A+ K+++
Sbjct: 537 DFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMK 576
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 367/679 (54%), Gaps = 80/679 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L++ + +L C KS +D ++VH+ I + + + +L+ YA CG L R+V
Sbjct: 97 LETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRV 156
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFI--------------------DDASRLFASMPERDQ 116
FD M KNV+ WN +++ K G + A LF + +RD
Sbjct: 157 FDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDV 216
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SWNSM+SG+ + LG + +M + + S L CA S +G VH+L
Sbjct: 217 ISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSL 276
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
KS + + + L+DMY KCG + A RVF+ M ERN+VSW S+I Y ++G + A
Sbjct: 277 AIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGA 336
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++ +M G++ D V + S++ ACA + G +H ++ + ++L + NAL+D
Sbjct: 337 IKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DYIKANNMESNLFVCNALMD 395
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAKCG S+++A +F+ M+ ++++SWN +
Sbjct: 396 MYAKCG-------------------------------SMEAANSVFSTMVVKDIISWNTM 424
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I GE LK P T +L ACA+L+ L+ G++ H +++++G
Sbjct: 425 I------GE----------LK-----PDSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
SD V N+L+D+Y+KCG + +F+ + +D VSW MI G +GYG EA
Sbjct: 464 ------SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
+ F +M G +PD V+ I +L ACSH+GL+E+G ++F M + + P +HY CMVD
Sbjct: 518 IATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVD 577
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LL R G L +A +E +P+ PDA IWG+LL C+ + +I L E VA+++ E+EP N+G
Sbjct: 578 LLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGY 637
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV-KDKRHPLNKE 655
YVLL+N+YAE +W EV R+R+ + K+G+ K PGCSWIEI G VN+F+ + HP +K
Sbjct: 638 YVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKN 697
Query: 656 IYLVLKMLTREMKRVGYVP 674
I +LK + R+MK G+ P
Sbjct: 698 IESLLKKMRRKMKEEGHFP 716
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 191/389 (49%), Gaps = 41/389 (10%)
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+ + +N+ I + Q G +A+E+ S +E T SV+ CA L +F +G +
Sbjct: 63 DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGKK 120
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H+ +++ + D LG LV YA CG L E R VFD M +NV MVS YAK
Sbjct: 121 VHS-IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179
Query: 334 SVK--------------------SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
K SA +F K+ +R+V+SWN++I+GY NG E LG++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + + T ++L CAN L LG+ H+ +K S E I N+L+
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK------SSFERRINFSNTLL 293
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG ++ R+FE M ER+ VSW +MI G ++G A+ L ++M G K D V
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353
Query: 494 TMIGVLCACSHAGLVEEGR---KYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAK 548
+ +L AC+ +G ++ G+ Y + + E L + C ++D+ + G ++ A
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIKANNMESNL------FVCNALMDMYAKCGSMEAAN 407
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
++ M ++ D + W +++ K M
Sbjct: 408 SVFSTMVVK-DIISWNTMIGELKPDSRTM 435
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 357/660 (54%), Gaps = 70/660 (10%)
Query: 19 SSP-FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S P +A SC +S R++HA IK+ F+S+ + ++DVYAK G L
Sbjct: 251 SQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLV------ 304
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA R F +P + + N+M+ G + +EA+
Sbjct: 305 -------------------------DARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQ 339
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S SACA + G QVH L KS + DV + +A++D+YG
Sbjct: 340 LFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYG 399
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A VF M +R+ VSWN++I EQN D + M+ SG+EPD+ T S
Sbjct: 400 KCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGS 459
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA L + + GL +H + ++ L D + + +VDMY KCG + EA+ + DR+
Sbjct: 460 VLKACAGLQSLEYGLVVHGKAIK-SGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG-- 516
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +VSWN++I+G++ ++EEA F +
Sbjct: 517 -----------------------------GQELVSWNSIISGFSLTKQSEEAQRFFSEML 547
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P H+T+ +L+ CANLA ++LG+Q H ++K + D ++ ++L+DMY
Sbjct: 548 DMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEML------GDEYISSTLVDMYA 601
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ D +FE + D+VSWNAMI G A +G G EAL +F++M P+H T +
Sbjct: 602 KCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVA 661
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GL+++G +YF M+ + L P +H+ CMVD+LGR+ EA I +MP++
Sbjct: 662 VLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIE 721
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
DAV+W +LL+ CK+ +++ + E A +L ++P ++ Y+LLSN+YA G+W +V R R
Sbjct: 722 ADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTR 781
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+LMR+ + K+PGCSWIE+ ++ F+V DK HP +KE+Y +L L EMK GY P ++
Sbjct: 782 RLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPASA 841
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 280/562 (49%), Gaps = 52/562 (9%)
Query: 15 AFLDSSPFAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
F+ ++ F+ L C + +++ + HAR++ S F F+ N L+ +YA+CG
Sbjct: 13 GFVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAH 72
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A VFD M +++ +WN+++T + G D A+ LF +MP+ D SWN+++SG+ QH F
Sbjct: 73 AHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMF 132
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
++G ++M AL + L +C G D +G Q+HAL K+ +DV GSAL
Sbjct: 133 RNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSAL 192
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+DMYGKC + A R F GM ERN VSW + I QN + +E+FV+M G+ +
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
AS +CA++ Q+HA ++ +D V+G A+VD+YAK G L +AR F
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIK-NVFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+P NV + NA++ G + G EA+ L
Sbjct: 312 GLP-------------------------------HHNVETCNAMMVGLVRTGLGAEAMQL 340
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R V + + +ACA + G Q H VK SG + D+ V N++
Sbjct: 341 FQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK------SGFDVDVCVRNAI 394
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+D+Y KC ++ + +F+ M +RD VSWNA+I QN + + +ML G +PD
Sbjct: 395 LDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDD 454
Query: 493 VTMIGVLCACS-----HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
T VL AC+ GLV G+ S + + ++ + +VD+ + G + EA
Sbjct: 455 FTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS------STVVDMYCKCGAITEA 508
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
+ L + + Q + V W S+++
Sbjct: 509 QKLHDRIGGQ-ELVSWNSIISG 529
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/657 (36%), Positives = 376/657 (57%), Gaps = 32/657 (4%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+ + + +R+ V D R+ A + + ++ N ++ YA G L A F +
Sbjct: 112 RAITAHMRAGRVPDAERLFAAMPRRSTST----YNTMLAGYAANGRLPQALSFFRSIPRP 167
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+ F++N+++ L + D LF MP +D S+N M+S A H S A YF +
Sbjct: 168 DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYF-DLA 226
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E A+S + L+A + + + L SR D +AL+ Y + ++
Sbjct: 227 PEKDAVS---WNGMLAAYVRNGRIQEARE----LFDSRTEWDAISWNALMAGYVQRSQIE 279
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP--DEVTLASVVSA 261
A+++F+ M +R++VSWN++++ Y + G ++A +F + P D T ++VS
Sbjct: 280 EAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF------DVAPIRDVFTWTAIVSG 333
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A +E ++ + + V NA++ Y + + EA+ +FD MP RNV S
Sbjct: 334 YAQNGMLEEAKRVFDAM-----PDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVAS 388
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M++GYA+A + AR +F M +++ VSW A++A Y+Q G +EE L LF+ + R
Sbjct: 389 WNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGE 448
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
F +L+ CA++A L+ G Q H+ ++K +G FVGN+L+ MY KCGS
Sbjct: 449 WVNRSAFACVLSTCADIAALECGMQLHSRLIK------AGYGVGCFVGNALLAMYFKCGS 502
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E+ FE M ERD VSWN MI G A++G+G EAL +F M KPD +T++GVL A
Sbjct: 503 MEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAA 562
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+GLVE+G YF SM ++ G+A +HYTCM+DLLGRAG LDEA L++ MP +PD+
Sbjct: 563 CSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDST 622
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W +V ++R +M
Sbjct: 623 MWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMH 682
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+RGV K PG SWIE+ V+ F V D HP ++IY L+ L MK+ GYV +A+D
Sbjct: 683 ERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYV-SATD 738
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 51/367 (13%)
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P V+ ++ + +A V A +F M R+ ++N ++AGY NG +AL FR
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162
Query: 375 LLKRESVCPTHYTFGNLLNA---CANLADLQ-------------LGRQAHTHVVKHGLRF 418
+ R P +++ LL+A ++LAD++ +H HGL
Sbjct: 163 SIPR----PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSH-ANHGLVS 217
Query: 419 LS------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
L+ E D N ++ Y++ G +++ +F++ E D +SWNA++ G Q
Sbjct: 218 LARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQ 277
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD--H 530
EA +F KM + D V+ ++ + G + E R+ F +AP++D
Sbjct: 278 IEEAQKMFNKM----PQRDVVSWNTMVSGYARRGDMAEARRLFD-------VAPIRDVFT 326
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
+T +V + G L+EAK + +AMP +AV W +++AA V R +M AK+L +
Sbjct: 327 WTAIVSGYAQNGMLEEAKRVFDAMP-DKNAVSWNAMMAAY-VQRRMM---EEAKELFDAM 381
Query: 591 P-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
P N + + YA+ G E + +M ++ V SW +L + ++
Sbjct: 382 PCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAV-----SWAAMLAAYSQIGFSEET 436
Query: 650 HPLNKEI 656
L KE+
Sbjct: 437 LQLFKEM 443
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+++ S FA +L +C ++ ++H+R+IK+ + F+ N L+ +Y KCG + A
Sbjct: 449 WVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHS 508
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
F++M ++V +WN++I G + GF +A +F +M + D + +++ +
Sbjct: 509 AFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGL 568
Query: 132 FSEALGYFVKMHSE 145
+ + YF MH +
Sbjct: 569 VEKGISYFYSMHRD 582
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/662 (35%), Positives = 373/662 (56%), Gaps = 43/662 (6%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
H + IKS F IF+ N+LI YAK G L A+K+FD+M +NVF+WN+II +K +
Sbjct: 434 HLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNL 493
Query: 102 DDASRLFASMPERDQCSWNSMVSGFAQHDRFS-EALGYFVKMHS--ENFALSEYSFGSAL 158
A LF S +D ++NSM+SG+A+ D + +ALG+F++M + + + E++ + L
Sbjct: 494 RQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITML 553
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG------- 211
+ A G Q+H+ + K+ V+ S+LIDMY KCG A RV+ G
Sbjct: 554 NLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDS 613
Query: 212 --------------------------MRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+ + ++V+WN++I+ + QNG ++L++FVRM
Sbjct: 614 VSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMAD 673
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ +E T ASV+SAC++L + K G ++HA +++ + N + + LVD+Y KC +
Sbjct: 674 EKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFIC-SGLVDVYCKCNNMR 732
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A+ V + ++NV S TSM+ GY+ ++ AR +F + E+N W AL GY + +
Sbjct: 733 YAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQ 792
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
E L ++E+ P +++ ACA A L G+Q H+++++ G++ D
Sbjct: 793 CEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKL------D 846
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ +SL+DMY KCGS+ RIF + ++D + +N MI G A +G+ EA+ LFK+M+
Sbjct: 847 TKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVK 906
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KPD +T + +L AC H GLVE G +F SMS ++ + P DHY CM+DL GRA LD
Sbjct: 907 HGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLD 966
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A + +P+Q DAVIWG+ L AC+++ N L +LL IE N YV L+N+YA
Sbjct: 967 KALEFMRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYA 1026
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
G W E+ R+RK M+ + V K GCSW+ + +VF+ D+ H N+ IY L LT
Sbjct: 1027 AEGNWEEMGRIRKKMKGKEVKKNAGCSWVFVESKFHVFISGDRFHSKNEAIYSTLASLTD 1086
Query: 666 EM 667
E+
Sbjct: 1087 EL 1088
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 224/509 (44%), Gaps = 95/509 (18%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q D+ +D +L+ + +S +++H+ ++K+ +F + LID+Y+KCG
Sbjct: 536 QTAPDMIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCG 595
Query: 69 CL-------YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLF-ASMPERDQCSWN 120
YG +V D +S N+++ + G ID A LF + + D +WN
Sbjct: 596 FFKEACRVYYGCGEVVDSVSR------NAMVAACCREGEIDVALDLFWKELEQNDVVAWN 649
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+M+SGF Q+ E+L FV+M E +E++F S LSAC+ K+G +VHA + K+
Sbjct: 650 TMISGFVQNGYEEESLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKN 709
Query: 181 RYSSDVYMGSALIDMYGKC-------------------------------GRVSCARRVF 209
R ++ ++ S L+D+Y KC G ++ AR++F
Sbjct: 710 RLIANPFICSGLVDVYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLF 769
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D + E+N W +L Y + E+ PD + L S++ ACA AA
Sbjct: 770 DSLDEKNSAVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALV 829
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G QIH+ ++R ++ D L ++LVDMY+KCG + A +F R V + S++
Sbjct: 830 PGKQIHSYMLRA-GIKLDTKLTSSLVDMYSKCGSIIYAERIF-----REVTDKDSII--- 880
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
+N +IAGY +G EA+ LF+ + + P TF
Sbjct: 881 -----------------------YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFV 917
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVE 443
LL+AC H +V+ G F +D + +ID+Y + ++
Sbjct: 918 ALLSAC-----------RHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLD 966
Query: 444 DGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ ++ D V W A + C NG
Sbjct: 967 KALEFMRKIPIQLDAVIWGAFLNACRING 995
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 249/562 (44%), Gaps = 120/562 (21%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
K G H KS ++ ++M + LI Y K G ++ A+++FD M ERN+ SWN++I
Sbjct: 427 LKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAA 486
Query: 227 Y--------------------------------EQNGPASDALEVFVRMMASG--IEPDE 252
Y +G AL F+ M + I DE
Sbjct: 487 YVKSHNLRQARALFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDE 546
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL--GNALVDMYAKCGKLNEA-RC 309
TL ++++ A L G Q+H+ ++ K NDL + ++L+DMY+KCG EA R
Sbjct: 547 FTLITMLNLTAKLCVISYGKQLHSFML---KTANDLTVFAASSLIDMYSKCGFFKEACRV 603
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN-VVSWNALIAGYTQNGENEE 368
+ + + VS +MV+ + + A +F K LE+N VV+WN +I+G+ QNG EE
Sbjct: 604 YYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEE 663
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+L LF + E V +TF ++L+AC+NL L+LG++ H +V+K+ L ++ F+
Sbjct: 664 SLKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLI------ANPFI 717
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK------- 481
+ L+D+Y KC ++ + + ++ S +MIVG + G EA LF
Sbjct: 718 CSGLVDVYCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNS 777
Query: 482 -----------KMLLC-------------GEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
K+ C + PD + +I ++ AC+ + G++ S
Sbjct: 778 AVWTALFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSY 837
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCL-------------------------------DE 546
M + G+ + +VD+ + G + +E
Sbjct: 838 MLRA-GIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHHGWENE 896
Query: 547 AKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL---LEIEPSNSGPYVLL 600
A L + M +PDA+ + +LL+AC+ + LGE+ + I P Y +
Sbjct: 897 AVQLFKEMVKHGFKPDAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDH-YACM 955
Query: 601 SNMYAELGRWGEVVRVRKLMRK 622
++Y GR ++ + + MRK
Sbjct: 956 IDLY---GRANQLDKALEFMRK 974
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/730 (32%), Positives = 379/730 (51%), Gaps = 107/730 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A ++ +C + ++ ++H ++K + ++++ LID Y K C
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHAC------------ 191
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
IDDA LF + + +W ++++G+++ R +L F +
Sbjct: 192 -------------------IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQ 232
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +Y S LSAC + G Q+H + +S DV M + ID Y KC +
Sbjct: 233 MKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHK 292
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R++FD M ++N+VSW ++I QN DAL++FV M G PD SV+++
Sbjct: 293 VQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLRN-----------DLVLG 291
C SL A ++G Q+HA ++ C+ L + DLV
Sbjct: 353 CGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSY 412
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIR---------------------------------- 317
NA+++ Y++ KL EA +F M +
Sbjct: 413 NAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK 472
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ + ++++ Y+K S V ARL+F ++ ++++V W A+ +GYTQ ENEE+L L
Sbjct: 473 YGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKL 532
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
++ L+ + P +TF ++ A +N+A L+ G+Q H V+K G + D FV N+L
Sbjct: 533 YKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGF------DDDPFVANTL 586
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY K GS+E+ + F + +D WN+MI AQ+G +AL +F+ M++ G KP++
Sbjct: 587 VDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNY 646
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT +GVL ACSH GL++ G +F SMS + G+ P +HY CMV LLGRAG L EAK IE
Sbjct: 647 VTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIE 705
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++ AV+W SLL+AC+V N+ LG Y A+ + P++SG YVLLSN++A G W
Sbjct: 706 KMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVN 765
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R+R+ M GVVK+PGCSWIE+ ++ F+ KD H + I LVL L ++K GY
Sbjct: 766 VRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGY 825
Query: 673 VPNASDDEAY 682
+ N + + Y
Sbjct: 826 MANTDNKQCY 835
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 262/553 (47%), Gaps = 87/553 (15%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L + L+S + +++H++I+ F +IF+ N L+ Y+K + A K+FD MS+KN
Sbjct: 45 LANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKN 104
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK-MH 143
+ T W+SMVS + H EAL FV+ M
Sbjct: 105 LVT-------------------------------WSSMVSMYTHHSHCLEALMLFVQFMR 133
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
S N +EY S + AC Q+H L+ K Y DVY+ ++LID Y K +
Sbjct: 134 SCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACID 193
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR +FDG++ + +W ++I Y + G + +L++F +M + PD+ L+SV+SAC
Sbjct: 194 DARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACL 253
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L + G QIH ++R + D+ + N +D Y KC K+ R +FDRM +NVVS
Sbjct: 254 MLKFLEGGKQIHCYVLR-SGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVS-- 310
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
W +IAG QN + +AL LF + R P
Sbjct: 311 -----------------------------WTTVIAGCMQNSFHRDALDLFVEMARMGWNP 341
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+ ++LN+C +L L+ GRQ H + +K + ++D FV N LIDMY KC S+
Sbjct: 342 DAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNI------DNDDFVKNGLIDMYAKCDSLT 395
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD---HVTMIGVLC 500
D ++F M D VS+NAMI G ++ EAL LF++M L P V+++GV
Sbjct: 396 DARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSA 455
Query: 501 ACSHAGLVEEGR----KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+ H L + KY S+ + G A ++D+ + + +A+ + E +
Sbjct: 456 SLYHLELSNQIHGLIIKYGVSLDEFAGSA--------LIDVYSKCSRVGDARLVFEEI-Q 506
Query: 557 QPDAVIWGSLLAA 569
D V+W ++ +
Sbjct: 507 DKDIVVWTAMFSG 519
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 12/292 (4%)
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N L + C K ++ V ++ +++ Y+K + V A +F M +N
Sbjct: 45 LANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKN 104
Query: 350 VVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+V+W+++++ YT + EAL LF + ++ + P Y +++ AC L Q H
Sbjct: 105 LVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIH 164
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
VVK G D++V SLID Y K ++D +F+ + + +W +I G +
Sbjct: 165 GLVVK------GGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYS 218
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+ G +L LF +M PD + VL AC +E G++ + + G+
Sbjct: 219 KQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRS-GIVMDV 277
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC---KVHRNIM 577
+D + + + L + M + + V W +++A C HR+ +
Sbjct: 278 SMVNGFIDFYFKCHKVQLGRKLFDRM-VDKNVVSWTTVIAGCMQNSFHRDAL 328
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/678 (34%), Positives = 363/678 (53%), Gaps = 78/678 (11%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
V+ +VGD +A LL C + + R +H II + F S +F+ ++ +YAK
Sbjct: 141 VRLVVGD--------YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAK 192
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
C R+ ID+A ++F M +D SW ++V+G+
Sbjct: 193 C------RQ-------------------------IDNAYKMFERMQHKDLVSWTTLVAGY 221
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
AQ+ AL ++M + S L A A ++G +H +S + S V
Sbjct: 222 AQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLV 281
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ +AL+DMY KCG AR VF GMR + +VSWN++I QNG + +A F++M+
Sbjct: 282 NVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDE 341
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G P VT+ V+ ACA+L + G +H +L+ KL +++ + N+L+ MY+KC +++
Sbjct: 342 GEVPTRVTMMGVLLACANLGDLERGWFVH-KLLDKLKLDSNVSVMNSLISMYSKCKRVDI 400
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A +F+ LE+ V+WNA+I GY QNG
Sbjct: 401 AASIFNN--------------------------------LEKTNVTWNAMILGYAQNGCV 428
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+EAL LF +++ + + +T ++ A LAD + RQA HGL + ++++
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITA---LADFSVNRQAKW---IHGLAVRACMDNNV 482
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FV +L+DMY KCG+++ ++F+ M ER ++WNAMI G +G G E L LF +M
Sbjct: 483 FVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKG 542
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
KP+ +T + V+ ACSH+G VEEG F SM +++ L P DHY+ MVDLLGRAG LD+
Sbjct: 543 AVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDD 602
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A I+ MP++P + G++L ACK+H+N+ LGE A+KL +++P G +VLL+N+YA
Sbjct: 603 AWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYAS 662
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
W +V +VR M +G+ K PGCSW+E+ ++ F HP +K+IY L+ L E
Sbjct: 663 NSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDE 722
Query: 667 MKRVGYVPNASDDEAYEE 684
+K GYVP+ EE
Sbjct: 723 IKAAGYVPDPDSIHDVEE 740
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 156/500 (31%), Positives = 252/500 (50%), Gaps = 58/500 (11%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+++F +I+ K+G +A+R+F + + ++ M+ G+A++ +AL +F++
Sbjct: 77 NEHLFQ-TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLR 135
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + L + L C ++D K G ++H L+ + + S++++ +A++ +Y KC +
Sbjct: 136 MMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQ 195
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F+ M+ +++VSW +L+ Y QNG A AL++ ++M +G +PD VTL S++ A
Sbjct: 196 IDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPA 255
Query: 262 CASLAAFKEGLQIHARLMRC--EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A + A + G IH R E L N + NAL+DMY KCG AR VF M + V
Sbjct: 256 VADMKALRIGRSIHGYAFRSGFESLVN---VTNALLDMYFKCGSARIARLVFKGMRSKTV 312
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS +M+ G A QNGE+EEA F + E
Sbjct: 313 VSWNTMIDGCA-------------------------------QNGESEEAFATFLKMLDE 341
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
PT T +L ACANL DL+ G H + K L +S++ V NSLI MY KC
Sbjct: 342 GEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKL------DSNVSVMNSLISMYSKC 395
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
V+ IF + E+ V+WNAMI+G AQNG EAL LF M G K D T++GV+
Sbjct: 396 KRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVI 454
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLA--PLKDH----YTCMVDLLGRAGCLDEAKTLIEA 553
A + + + + HGLA D+ T +VD+ + G + A+ L +
Sbjct: 455 TALADFSVNRQAKWI-------HGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDM 507
Query: 554 MPMQPDAVIWGSLLAACKVH 573
M + + W +++ H
Sbjct: 508 M-QERHVITWNAMIDGYGTH 526
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 38/340 (11%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+ + K+ + ++ + +I ++ K G S A RVF+ + + V ++ ++ Y +N
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
DAL F+RMM + A ++ C K+G +IH L+ ++L +
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG-LIITNGFESNLFVM 183
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
A++ +YAKC +++ A +F+RM +++VS T++V+GYA
Sbjct: 184 TAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYA--------------------- 222
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
QNG + AL L ++ P T ++L A A++ L++GR
Sbjct: 223 ----------QNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSI---- 268
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
HG F SG ES + V N+L+DMY KCGS +F+ M + VSWN MI GCAQNG
Sbjct: 269 --HGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNG 326
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
EA F KML GE P VTM+GVL AC++ G +E G
Sbjct: 327 ESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG 366
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/663 (34%), Positives = 357/663 (53%), Gaps = 71/663 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D+ +L +C S + VH ++K+ F ++F+ N LI +Y++ G L AR +
Sbjct: 122 VDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLL 181
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK+ NK+V SW++M+ + + EAL
Sbjct: 182 FDKIENKDVV-------------------------------SWSTMIRSYDRSGLLDEAL 210
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVYMGSALID 194
MH SE S A D K+G +HA + ++ S V + +ALID
Sbjct: 211 DLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALID 270
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KC ++ ARRVFDG+ + +I+SW ++I Y ++ + +FV+M+ G+ P+E+T
Sbjct: 271 MYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEIT 330
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ S+V C + A + G +HA +R LVL A +DMY KCG
Sbjct: 331 MLSLVKECGTAGALELGKLLHAFTLR-NGFTLSLVLATAFIDMYGKCG------------ 377
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
V+SAR +F ++++ W+A+I+ Y QN +EA +F
Sbjct: 378 -------------------DVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFV 418
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + P T +LL CA L++G+ H+++ K G++ D+ + S +D
Sbjct: 419 HMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIK------GDMILKTSFVD 472
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY CG ++ R+F +RD WNAMI G A +G+G AL LF++M G P+ +T
Sbjct: 473 MYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDIT 532
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
IG L ACSH+GL++EG++ F M E G P +HY CMVDLLGRAG LDEA LI++M
Sbjct: 533 FIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSM 592
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PM+P+ ++GS LAACK+H+NI LGE+ AK+ L +EP SG VL+SN+YA RWG+V
Sbjct: 593 PMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVA 652
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+R+ M+ G+VK+PG S IE+ G ++ F++ D+ HP K++Y ++ + +++ GY P
Sbjct: 653 YIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTP 712
Query: 675 NAS 677
+ S
Sbjct: 713 DVS 715
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 231/478 (48%), Gaps = 47/478 (9%)
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
+++ + +++ ++A + M + + + S L AC F +G +VH + K+
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
+ DV++ +ALI MY + G ++ AR +FD + +++VSW+++I Y+++G +AL++
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAK 300
M ++P E+ + S+ A LA K G +HA +MR K ++ + L AL+DMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
C L AR VFD + +++S T+M++ Y +++ +F KML
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKML-------------- 320
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
GE G+F P T +L+ C L+LG+ H +++G
Sbjct: 321 ---GE-----GMF---------PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL-- 361
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
+ + + IDMY KCG V +F++ +D + W+AMI AQN EA +F
Sbjct: 362 ----SLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIF 417
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE--HGLAPLKDHYTCMVDLL 538
M CG +P+ TM+ +L C+ AG +E G+ S + K+ G LK T VD+
Sbjct: 418 VHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILK---TSFVDMY 474
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
G +D A L A D +W ++++ +H + GE + E+E P
Sbjct: 475 ANCGDIDTAHRLF-AEATDRDISMWNAMISGFAMHGH---GEAALELFEEMEALGVTP 528
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 31/313 (9%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R +++G+ F + L+ C + ++ + +HA +++ F + + ID+Y
Sbjct: 314 RLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMY 373
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KCG + AR VFD +K++ W+++I S
Sbjct: 374 GKCGDVRSARSVFDSFKSKDLMMWSAMI-------------------------------S 402
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
+AQ++ EA FV M +E + S L CA + +MG +H+ + K
Sbjct: 403 SYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKG 462
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D+ + ++ +DMY CG + A R+F +R+I WN++I+ + +G ALE+F M
Sbjct: 463 DMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEME 522
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
A G+ P+++T + AC+ +EG ++ +++ + +VD+ + G L
Sbjct: 523 ALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLL 582
Query: 305 NEARCVFDRMPIR 317
+EA + MP+R
Sbjct: 583 DEAHELIKSMPMR 595
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 320 VSETSMVSG-YAKASSVKSARLMFTKM--LERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ET + G + K SS S R+ + N + LI Y +N +A ++ +
Sbjct: 56 LNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYM 115
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ ++ ++L AC + LG++ H VVK+G D+FV N+LI MY
Sbjct: 116 RGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFH------GDVFVCNALIMMY 169
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+ GS+ +F+ + +D VSW+ MI ++G EAL L + M + KP + MI
Sbjct: 170 SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMI 229
Query: 497 GV 498
+
Sbjct: 230 SI 231
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 252/728 (34%), Positives = 371/728 (50%), Gaps = 122/728 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD +L +C S H I + F S +FI N L+ +Y++CG L
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL------ 61
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFS 133
++AS +F + +R D SWNS+VS +
Sbjct: 62 -------------------------EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAW 96
Query: 134 EALGYFVKM------HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
AL F KM N S + L AC +VH ++ DV+
Sbjct: 97 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVF 156
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP--------------- 232
+G+ALID Y KCG + A +VF+ M +++VSWN+++ Y Q+G
Sbjct: 157 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 216
Query: 233 --------------------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ +AL VF +M+ SG P+ VT+ SV+SACASL AF +G+
Sbjct: 217 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 276
Query: 273 QIHARLMRCEKLR---------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+IHA ++ L DL++ NAL+DMY+KC AR +FD +P+
Sbjct: 277 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE------ 330
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES--V 381
ERNVV+W +I G+ Q G++ +AL LF + E V
Sbjct: 331 -----------------------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 367
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +L ACA+LA +++G+Q H +V++H + S FV N LI+MY KCG
Sbjct: 368 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHH----QYDSSAYFVANCLINMYSKCGD 423
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V+ +F++M ++ +SW +M+ G +G G+EAL +F KM G PD +T + VL A
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 483
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH G+V++G YF SMS ++GL P +HY +DLL R G LD+A ++ MPM+P AV
Sbjct: 484 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 543
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W +LL+AC+VH N+ L E+ KL+E+ N G Y L+SN+YA GRW +V R+R LM+
Sbjct: 544 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 603
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASD 678
K G+ K+PGCSW++ F V D+ HPL+ +IY +L+ L +K +GYVP A
Sbjct: 604 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 663
Query: 679 DEAYEEQN 686
D EE+N
Sbjct: 664 DVDEEEKN 671
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/637 (36%), Positives = 357/637 (56%), Gaps = 47/637 (7%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
+I Y + G L AR++ + + +K + WN++I G K G +DA ++F MP +D S
Sbjct: 116 MITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVS 175
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NSM++G+ Q+ + AL +F M N S+ ++ S D Q+ +
Sbjct: 176 YNSMLAGYTQNGKMHLALQFFESMTERNVV----SWNLMVAGYVKSGDLSSAWQLFEKIP 231
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
S V M L K G+++ AR +FD M +N+VSWN++I Y Q+ +A++
Sbjct: 232 NPNAVSWVTMLCGL----AKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVK 287
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR------------- 285
+F +M D V+ ++++ + E Q++ + M C+ +
Sbjct: 288 LFKKM----PHKDSVSWTTIINGYIRVGKLDEARQVYNQ-MPCKDITAQTALMSGLIQNG 342
Query: 286 --------------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+D+V N+++ Y++ G+++EA +F +MPI+N VS +M+SGYA+
Sbjct: 343 RIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQ 402
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
A + A +F M E+N+VSWN+LIAG+ QN +AL ++ +E P TF
Sbjct: 403 AGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACT 462
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L+ACANLA LQ+G Q H +++K SG +D+FVGN+LI MY KCG V+ ++F
Sbjct: 463 LSACANLAALQVGNQLHEYILK------SGYMNDLFVGNALIAMYAKCGRVQSAEQVFRD 516
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ D +SWN++I G A NGY +A F++M PD VT IG+L ACSHAGL +G
Sbjct: 517 IECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQG 576
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
F M ++ + PL +HY+C+VDLLGR G L+EA + M ++ +A +WGSLL AC+
Sbjct: 577 LDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACR 636
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH+N+ LG + A++L E+EP N+ Y+ LSNM+AE GRW EV RVR LMR + KQPGC
Sbjct: 637 VHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGC 696
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
SWIE+ + F+ D K I ++L L M+
Sbjct: 697 SWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMR 733
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 255/566 (45%), Gaps = 105/566 (18%)
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
F NR I K G + A ++F M++KN+ T+NS+I+ L K I DA +LF M R
Sbjct: 18 FNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLR 77
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYF-VKMHSENFA------------------------- 148
+ SWN+M++G+ ++ EA F V +NF+
Sbjct: 78 NLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVP 137
Query: 149 --LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
L + + ++ A F +V + + D+ ++++ Y + G++ A
Sbjct: 138 DKLDTACWNAMIAGYAKKGQFNDAKKVFEQMP----AKDLVSYNSMLAGYTQNGKMHLAL 193
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM--------------------MAS 246
+ F+ M ERN+VSWN ++ Y ++G S A ++F ++ MA
Sbjct: 194 QFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAE 253
Query: 247 GIEP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAKCGKL 304
E D + +VVS A +A + + LQ+ + +K+ D V +++ Y + GKL
Sbjct: 254 ARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKL 313
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+EAR V+++MP +++ ++T+++SG + + A MF+++ +VV WN++IAGY+++G
Sbjct: 314 DEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSG 373
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EAL LFR + +K+ + +
Sbjct: 374 RMDEALNLFRQMP----------------------------------IKNSVSW------ 393
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
N++I Y + G ++ IF+ M E++ VSWN++I G QN +AL M
Sbjct: 394 -----NTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMG 448
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL--KDHYTCMVDLLGRAG 542
G+KPD T L AC++ ++ G + + K + L + M GR
Sbjct: 449 KEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQ 508
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLA 568
++ IE + D + W SL++
Sbjct: 509 SAEQVFRDIECV----DLISWNSLIS 530
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 170/310 (54%), Gaps = 4/310 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q+ + D + L+ +++ + + ++ +RI A ++ N +I Y++
Sbjct: 317 RQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRI----GAHDVVCWNSMIAGYSRS 372
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + A +F +M KN +WN++I+G + G +D A+ +F +M E++ SWNS+++GF
Sbjct: 373 GRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFL 432
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q++ + +AL V M E + +F LSACA ++G Q+H + KS Y +D++
Sbjct: 433 QNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLF 492
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+ALI MY KCGRV A +VF + +++SWNSLI+ Y NG A+ A + F +M +
Sbjct: 493 VGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSER 552
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PDEVT ++SAC+ +GL I ++ + + LVD+ + G+L EA
Sbjct: 553 VVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEA 612
Query: 308 RCVFDRMPIR 317
M ++
Sbjct: 613 FNTVRGMKVK 622
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 254/538 (47%), Gaps = 53/538 (9%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ K+ F N I L K G +++A R+F +M ++ ++NSM+S A++ R +A F
Sbjct: 13 AGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFD 72
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M N S + AG + M + L D + + +I Y + G
Sbjct: 73 QMSLRNLV-------SWNTMIAGYLHNNMVEEASELFD-VMPERDNFSWALMITCYTRKG 124
Query: 201 RVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
++ AR + + + ++ + WN++I Y + G +DA +VF +M A +V
Sbjct: 125 KLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAK----------DLV 174
Query: 260 SACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
S + LA + + ++H L E + ++V N +V Y K G L+ A +F+++P N
Sbjct: 175 SYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPN 234
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLK 377
VS +M+ G AK + AR +F +M +NVVSWNA+IA Y Q+ + +EA+ LF ++
Sbjct: 235 AVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPH 294
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
++SV T ++N + L RQ + + DI +L+ +
Sbjct: 295 KDSVSWT-----TIINGYIRVGKLDEARQVYNQM----------PCKDITAQTALMSGLI 339
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+ G +++ ++F + D V WN+MI G +++G EAL LF++M + + V+
Sbjct: 340 QNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPI----KNSVSWNT 395
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP-- 555
++ + AG ++ + F +M +++ + + + L LD K+L+
Sbjct: 396 MISGYAQAGQMDRATEIFQAMREKN----IVSWNSLIAGFLQNNLYLDALKSLVMMGKEG 451
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN----MYAELGR 609
+PD + L+AC + +G + + +L+ N + + N MYA+ GR
Sbjct: 452 KKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMND---LFVGNALIAMYAKCGR 506
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K G+R + F N I K G VE+ RIF M ++ V++N+MI A+N
Sbjct: 3 LKLGIRSIGEAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNA 62
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+A LF +M L + + G L H +VEE + F M P +D++
Sbjct: 63 RIRDARQLFDQMSLRNLVSWNTMIAGYL----HNNMVEEASELFDVM-------PERDNF 111
Query: 532 T--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV-AKKLLE 588
+ M+ R G L++A+ L+E +P + D W +++A G++ AKK+ E
Sbjct: 112 SWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKK-----GQFNDAKKVFE 166
Query: 589 IEPSNS-GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
P+ Y + Y + G+ ++ + M +R VV
Sbjct: 167 QMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVV 205
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 324/525 (61%), Gaps = 40/525 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ L C + G VHA L S + + + + + +++MY KCG + ARR+FD M
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+++V+W +LI + QN DAL +F +M+ G +P+ TL+S++ A S G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA ++ ++ + +G+ALVDMYA+CG ++
Sbjct: 210 QLHAFCLKY-GYQSSVYVGSALVDMYARCGHMD--------------------------- 241
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+A+L F M ++ VSWNALI+G+ + GE E AL L ++R++ PTH+T+ ++L
Sbjct: 242 ----AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVL 297
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ACA++ L+ G+ H H++K GL+ ++ F+GN+L+DMY K GS++D R+F+ +
Sbjct: 298 SACASIGALEQGKWVHAHMIKSGLKLIA------FIGNTLLDMYAKAGSIDDAKRVFDRL 351
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
V+ D VSWN M+ GCAQ+G G E L F++ML G +P+ ++ + VL ACSH+GL++EG
Sbjct: 352 VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL 411
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF M K++ + P HY VDLLGR G LD A+ I MP++P A +WG+LL AC++
Sbjct: 412 YYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRM 470
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H+N+ LG Y A++ E++P +SGP +LLSN+YA GRW +V +VRK+M++ GV KQP CS
Sbjct: 471 HKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
W+EI V++F+ D+ HP KEI + ++ ++K +GYVP+ S
Sbjct: 531 WVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTS 575
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 207/383 (54%), Gaps = 40/383 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKV 76
D + ++KLL C R V R VHA ++ S F + + +QN ++++YAKCGCL
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCL------ 139
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DDA R+F MP +D +W ++++GF+Q++R +AL
Sbjct: 140 -------------------------DDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDAL 174
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M F + ++ S L A GTQ+HA K Y S VY+GSAL+DMY
Sbjct: 175 LLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG + A+ FDGM ++ VSWN+LI+ + + G AL + +M +P T +
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SACAS+ A ++G +HA +++ L+ +GN L+DMYAK G +++A+ VFDR+
Sbjct: 295 SVLSACASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVK 353
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVSWNALIAGYTQNGENEEALGL 372
+VVS +M++G A+ K F +ML E N +S+ ++ + +G +E L
Sbjct: 354 PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 373 FRLLKRESVCP--THY-TFGNLL 392
F L+K+ V P HY TF +LL
Sbjct: 414 FELMKKYKVEPDVPHYVTFVDLL 436
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 167/324 (51%), Gaps = 39/324 (12%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD + ++ C L ++G +HA L+ L N LVL N +V+MYAKCG L++AR
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+FD MP +++V+ T++++G+++ + + A L+F +ML
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML----------------------- 181
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
R P H+T +LL A + L G Q H +K+G +S ++VG
Sbjct: 182 --------RLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY------QSSVYVG 227
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
++L+DMY +CG ++ F+ M + VSWNA+I G A+ G G AL L KM +
Sbjct: 228 SALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P H T VL AC+ G +E+G+ + M K GL + ++D+ +AG +D+AK
Sbjct: 288 PTHFTYSSVLSACASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKR 346
Query: 550 LIEAMPMQPDAVIWGSLLAACKVH 573
+ + + ++PD V W ++L C H
Sbjct: 347 VFDRL-VKPDVVSWNTMLTGCAQH 369
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C ++ + VHA +IKS FI N L+D+YAK G
Sbjct: 293 YSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS------------ 340
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
IDDA R+F + + D SWN+M++G AQH E L F +
Sbjct: 341 -------------------IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQ 381
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E SF L+AC+ S G L+ K + DV +D+ G+ G
Sbjct: 382 MLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGL 441
Query: 202 VSCARRVFDGMR-ERNIVSWNSLI 224
+ A R M E W +L+
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALL 465
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G G AL L ++ L PD+ +L C+ G VE+GR + + H L
Sbjct: 69 GTGLYALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVL 125
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+V++ + GCLD+A+ + + MP + D V W +L+A
Sbjct: 126 QNIIVNMYAKCGCLDDARRMFDEMPTK-DMVTWTALIAG 163
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 365/663 (55%), Gaps = 42/663 (6%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L F LL +C+ + + + +HA KS ++ N +Y+KCG L+ A+
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD NVF++N++I K I A ++F +P+ D S+N++++ +A AL
Sbjct: 67 FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F ++ F L ++ + AC D + Q+H + Y + +A++ Y
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACY 184
Query: 197 GKCGRVSCARRVFDGMRE---RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
+ G ++ ARRVF M E R+ VSWN++I Q+ +A+E+F M+ G++ D
Sbjct: 185 SRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMF 244
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ASV++A + G+Q H +++ N V G+ L+D+Y+KC
Sbjct: 245 TMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHV-GSGLIDLYSKC------------ 291
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGL 372
A + R +F ++ ++V WN +I+G++Q + +E+ +
Sbjct: 292 ------------------AGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWC 333
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
FR ++ P +F + +AC+NL+ +G+Q H +K + + + + V N+L
Sbjct: 334 FREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPY-----NRVSVNNAL 388
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+ MY KCG+V D R+F+TM E + VS N+MI G AQ+G E+L LF+ ML P+
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNT 448
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T I VL AC H G VEEG+KYF+ M + + P +HY+CM+DLLGRAG L EA+ +IE
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIE 508
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP P ++ W +LL AC+ H N+ L A + L++EP N+ PYV+LSNMYA RW E
Sbjct: 509 TMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEE 568
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V++LMR+RGV K+PGCSWIEI V+VF+ +D HP+ KEI++ + + R+MK+ GY
Sbjct: 569 AATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGY 628
Query: 673 VPN 675
VP+
Sbjct: 629 VPD 631
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 220/492 (44%), Gaps = 32/492 (6%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
F L +F + L AC D G +HAL KS Y+ + +Y KCG + A
Sbjct: 4 TFPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA 63
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
+ FD + N+ S+N+LI Y ++ A +VF + +PD V+ ++++A A
Sbjct: 64 QTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADR 119
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV-----FDRMPIRNVV 320
+ L++ A + + L ++ G + + C +D N
Sbjct: 120 GECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVN-- 177
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++++ Y++ + AR +F +M E R+ VSWNA+I Q+ E EA+ LFR +
Sbjct: 178 --NAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMV 235
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + +T ++L A + DL G Q H ++K SG + VG+ LID+Y
Sbjct: 236 RRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIK------SGFHGNSHVGSGLIDLYS 289
Query: 438 KCGSVEDGCR-IFETMVERDWVSWNAMIVGCAQ-NGYGTEALGLFKKMLLCGEKPDHVTM 495
KC CR +FE + D V WN MI G +Q + + F++M G PD +
Sbjct: 290 KCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSF 349
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ V ACS+ G++ + K +V + + G + +A+ + + MP
Sbjct: 350 VCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Query: 556 MQPDAVIWGSLLAACKVH----RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
+ + V S++A H ++ L E + +K +I P N+ ++ + + G+
Sbjct: 410 -EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQK--DIAP-NTITFIAVLSACVHTGKVE 465
Query: 612 EVVRVRKLMRKR 623
E + +M++R
Sbjct: 466 EGQKYFNMMKER 477
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/640 (35%), Positives = 343/640 (53%), Gaps = 70/640 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +H ++ + S+I + L+ +YAKCG A+++F W
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF--------------------W 388
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + RD +W+++++ Q EAL F +M ++ + + S L
Sbjct: 389 G-----------LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSIL 437
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
ACA K+G +H K+ SD+ G+AL+ MY KCG + A F+ M R+IV
Sbjct: 438 PACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WNSLI Y Q G +A+++F ++ S I PD T+ VV ACA L +G IH +
Sbjct: 498 TWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI 557
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ +D + NAL+DMYAKCG S+ SA
Sbjct: 558 VKL-GFESDCHVKNALIDMYAKCG-------------------------------SLPSA 585
Query: 339 RLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
+F K ++ V+WN +IA Y QNG +EA+ F ++ E+ P TF ++L A A
Sbjct: 586 EFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAY 645
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
LA + G H +++ G FLS + VGNSLIDMY KCG + ++F M +D
Sbjct: 646 LAAFREGMAFHACIIQMG--FLS----NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDT 699
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSWNAM+ G A +G+G A+ LF M + D V+ + VL AC H GLVEEGRK F S
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHS 759
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
MS ++ + P +HY CMVDLLGRAG DE I+ MP++PDA +WG+LL +C++H N+
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 819
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LGE L+++EP N +V+LS++YA+ GRW + + R M G+ K PGCSW+E+
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELK 879
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+ F V DK HP + ++L+ L +M+++GYVP+ S
Sbjct: 880 NKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRS 919
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/536 (30%), Positives = 258/536 (48%), Gaps = 74/536 (13%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R +H + + F+S + N LID+Y+KCG
Sbjct: 250 RSIHGYVFRRDFSSAV--SNGLIDLYSKCGD----------------------------- 278
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+D A R+F M ++D SW +M++G+A + F E L F KM N +++ S SA
Sbjct: 279 --VDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAF 336
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
A A ++D + G ++H + R SD+ + + L+ MY KCG A+++F G++ R++V
Sbjct: 337 LAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLV 396
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+W+++I Q G +AL +F M ++P+ VTL S++ ACA L+ K G IH
Sbjct: 397 AWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + + +DL G ALV MYAKCG A F+RM R++V+ S+++GYA
Sbjct: 457 VKAD-MDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYA-------- 507
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
Q G+ A+ +F L+ ++ P T ++ ACA L
Sbjct: 508 -----------------------QIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDW 457
DL G H +VK G ESD V N+LIDMY KCGS+ +F +T +D
Sbjct: 545 NDLDQGTCIHGLIVKLGF------ESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDE 598
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V+WN +I QNG+ EA+ F +M L P+ VT + VL A ++ EG + +
Sbjct: 599 VTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHAC 658
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + G ++D+ + G L ++ L M D V W ++L+ VH
Sbjct: 659 II-QMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD-HKDTVSWNAMLSGYAVH 712
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 259/558 (46%), Gaps = 84/558 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C + ++ + H I + ++FI L+D+Y+K G L AR+VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM ++V WN++I GL + D C EA+
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQ---------------SEDPC----------------EAVD 216
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F M S S + + ++ +H + + +SS V G LID+Y
Sbjct: 217 FFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYS 274
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V ARRVFD M +++ VSW +++ Y NG + LE+F +M + ++V+ S
Sbjct: 275 KCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVS 334
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
A A ++G +IH ++ +++ +D+++ L+ MYAKCG+
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQ-QRIDSDILVATPLMVMYAKCGE-------------- 379
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ A+ +F + R++V+W+A+IA Q G EEAL LF+ ++
Sbjct: 380 -----------------TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA+L+ L+LG+ H VK + +SD+ G +L+ MY
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADM------DSDLSTGTALVSMYA 476
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG F M RD V+WN++I G AQ G A+ +F K+ L PD TM+G
Sbjct: 477 KCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVG 536
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGL-APLKDHYTC-----MVDLLGRAGCLDEAKTLI 551
V+ AC+ +++G + HGL L C ++D+ + G L A+ L
Sbjct: 537 VVPACALLNDLDQG-------TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 552 EAMPMQPDAVIWGSLLAA 569
D V W ++AA
Sbjct: 590 NKTDFTKDEVTWNVIIAA 607
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 205/445 (46%), Gaps = 70/445 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + + +H +K+ S++ L+ +YAKCG A F++MS+++
Sbjct: 436 ILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRD 495
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ TWNS+I +G+AQ A+ F K+
Sbjct: 496 IVTWNSLI-------------------------------NGYAQIGDPYNAIDMFYKLRL 524
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + ACA D GT +H L+ K + SD ++ +ALIDMY KCG +
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584
Query: 205 ARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A +F+ ++ V+WN +I Y QNG A +A+ F +M P+ VT SV+ A A
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
LAAF+EG+ HA +++ L N LV GN+L+DMYAKCG+L + +F+ M ++ VS
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLV-GNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWN 703
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M+SGYA +G + A+ LF L++ V
Sbjct: 704 AMLSGYA-------------------------------VHGHGDRAIALFSLMQESQVQI 732
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+F ++L+AC + ++ GR+ + H + + D+ ++D+ + G +
Sbjct: 733 DSVSFVSVLSACRHXGLVEEGRK-----IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787
Query: 444 DGCRIFETM-VERDWVSWNAMIVGC 467
+ + M VE D W A++ C
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSC 812
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ +C + +H I+K F S+ ++N LID+YAKCG L A +F
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+K K+ TWN II + + Q+ EA+
Sbjct: 590 NKTDFTKDEVTWNVII-------------------------------AAYMQNGHAKEAI 618
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M ENF + +F S L A A F+ G HA + + + S+ +G++LIDMY
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMY 678
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG++ + ++F+ M ++ VSWN++++ Y +G A+ +F M S ++ D V+
Sbjct: 679 AKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC +EG +I + ++ DL +VD+ + G +E MP+
Sbjct: 739 SVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798
Query: 317 RNVVSETSMVSGYAKA-SSVKSARLM---FTKMLERNVVSWNALIAGYTQNGENEEA 369
+ G + S+VK + K+ RN + L + Y Q+G +A
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 855
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F +L + + + HA II+ F S + N LID+YAKCG L + K+F
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLF 691
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
++M +K+ +WN++++G G D A LF+ M E D S+ S++S
Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVE 751
Query: 134 EALGYFVKMHSENFA---LSEYSFGSALSACAGSVDFKMG-TQVH----------ALLSK 179
E F M + L Y+ L AG D +G +V ALL
Sbjct: 752 EGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 811
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
R S+V +G +D K + RN + L + Y Q+G +DA +
Sbjct: 812 CRMHSNVKLGEVALDHLVK-------------LEPRNPAHFVVLSSIYAQSGRWADAGKA 858
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
+M G++ + S V + AF+ G + H +L E + +L N L++
Sbjct: 859 RSKMNDLGLK--KTPGCSWVELKNKVHAFRVGDKSHPQL---ESMH---LLWNTLLEKME 910
Query: 300 KCGKLNEARCVF 311
K G + + CV
Sbjct: 911 KIGYVPDRSCVL 922
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/663 (36%), Positives = 364/663 (54%), Gaps = 72/663 (10%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+K + DL D F ++ +C + V +++HA++IK + +S + QN LI +Y +
Sbjct: 154 LKMLQADLV-PDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVR 212
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
F++MS DAS++F +P +D SW+S+++GF
Sbjct: 213 ----------FNQMS---------------------DASKVFYGIPAKDLISWSSIIAGF 241
Query: 127 AQHDRFSEALGYFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+Q EAL + +M S F +EY FGS+L AC+ + G+Q+H L K + +
Sbjct: 242 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGN 301
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
G +L DMY +CG + ARRVF+ + + SWN +I NG A +A+ VF M
Sbjct: 302 AIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRN 361
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
SG PD ++L S++ A A +G+QIH+ +++C L DL + N+L+ MY C L
Sbjct: 362 SGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLA-DLSVCNSLLTMYTFCSDL- 419
Query: 306 EARCVFDRMP-IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
C F+ RN KA SV SWNA++ Q+
Sbjct: 420 --YCCFNLFEDFRN------------KADSV----------------SWNAILTACLQHE 449
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+ E L LF+L+ P H T GNLL C ++ L+LG Q H + K GL
Sbjct: 450 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVL------ 503
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ F+ N LIDMY KCGS+ RIF++M D VSW+ +IVG AQ+G+G EAL LF++M
Sbjct: 504 EQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMK 563
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G +P+HVT +GVL ACSH GLVEEG K ++ M EHG++P K+H +C+VDLL RAG L
Sbjct: 564 SSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHL 623
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
+EA+ I+ M ++PD V+W +LL+ACK N+ L + A+ +L+I+P NS +VLL +M+
Sbjct: 624 NEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMH 683
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A G W + +R M+K V K PG SWI++ +++F +D HP +IY VL +
Sbjct: 684 ASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNIW 743
Query: 665 REM 667
+M
Sbjct: 744 SQM 746
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 269/549 (48%), Gaps = 75/549 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ +C S+S++ R++H I+ S + + N ++ +Y KCG L AR+V
Sbjct: 67 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV----- 121
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F MPER+ S+ S+++G++Q+ + +EA+ ++K
Sbjct: 122 --------------------------FDFMPERNLVSYTSVITGYSQNGQEAEAITLYLK 155
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +++FGS + ACA + D +G Q+HA + K SS + +ALI MY + +
Sbjct: 156 MLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 215
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVS 260
+S A +VF G+ ++++SW+S+I + Q G +AL M++ G+ P+E S +
Sbjct: 216 MSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 275
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+SL G QIH ++ E L + + G +L DMYA+CG L+ AR VF++
Sbjct: 276 ACSSLLRPDYGSQIHGLCIKLE-LTGNAIAGCSLCDMYARCGFLDSARRVFNQ------- 327
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ER + SWN +IAG NG +EA+ +F ++
Sbjct: 328 -------------------------IERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS 362
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + +LL A L G Q H+ ++K G FL +D+ V NSL+ MY C
Sbjct: 363 GFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCG--FL----ADLSVCNSLLTMYTFC 416
Query: 440 GSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ +FE + D VSWNA++ C Q+ E L LFK ML+ +PDH+TM +
Sbjct: 417 SDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 476
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L C ++ G + S + GL + ++D+ + G L +A+ + ++M
Sbjct: 477 LRGCVEISSLKLGSQ-VHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMD-NG 534
Query: 559 DAVIWGSLL 567
D V W +L+
Sbjct: 535 DVVSWSTLI 543
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 230/480 (47%), Gaps = 47/480 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
N ++ ++ + EAL F + +F + ++ S + AC+ S G ++H +
Sbjct: 32 NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
S D + + ++ MYGKCG + AR VFD M ERN+VS+ S+IT Y QNG ++A+
Sbjct: 92 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
++++M+ + + PD+ S++ ACA G Q+HA++++ E + L+ NAL+ MY
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLES-SSHLIAQNALIAMY 210
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+ ++++A VF +P ++++S W+++IA
Sbjct: 211 VRFNQMSDASKVFYGIPAKDLIS-------------------------------WSSIIA 239
Query: 359 GYTQNGENEEALG-LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G++Q G EAL L +L P Y FG+ L AC++L G Q H +K L
Sbjct: 240 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELT 299
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ G SL DMY +CG ++ R+F + D SWN +I G A NGY EA+
Sbjct: 300 ------GNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAV 353
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M G PD +++ +LCA + + +G + S + K LA L C L
Sbjct: 354 SVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLS---VCNSLL 410
Query: 538 LGRAGCLDE--AKTLIEAMPMQPDAVIWGSLLAACKVHRNI--MLGEYVAKKLLEIEPSN 593
C D L E + D+V W ++L AC H ML + + E EP +
Sbjct: 411 TMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDH 470
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R+ R VS + + + + S++K+ LM N I +N EAL
Sbjct: 3 RLGARVSVSNSQIPATSSVVSTIKTEELM------------NDHINSLCRNSFYREALEA 50
Query: 373 FRLLKRESVCPTHY-TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
F ++ S T+ +L+ AC++ L GR+ H H++ ++ D + N
Sbjct: 51 FDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKY------DTILNNH 104
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
++ MY KCGS+ D +F+ M ER+ VS+ ++I G +QNG EA+ L+ KML PD
Sbjct: 105 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPD 164
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
++ AC+ AG V G++ + + K + L ++ + R + +A +
Sbjct: 165 QFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASKVF 223
Query: 552 EAMPMQPDAVIWGSLLA 568
+P + D + W S++A
Sbjct: 224 YGIPAK-DLISWSSIIA 239
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 252/728 (34%), Positives = 371/728 (50%), Gaps = 122/728 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD +L +C S H I + F S +FI N L+ +Y++CG L
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL------ 168
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFS 133
++AS +F + +R D SWNS+VS +
Sbjct: 169 -------------------------EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAW 203
Query: 134 EALGYFVKM------HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
AL F KM N S + L AC +VH ++ DV+
Sbjct: 204 TALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVF 263
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP--------------- 232
+G+ALID Y KCG + A +VF+ M +++VSWN+++ Y Q+G
Sbjct: 264 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 323
Query: 233 --------------------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ +AL VF +M+ SG P+ VT+ SV+SACASL AF +G+
Sbjct: 324 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 383
Query: 273 QIHARLMRCEKLR---------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+IHA ++ L DL++ NAL+DMY+KC AR +FD +P+
Sbjct: 384 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE------ 437
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES--V 381
ERNVV+W +I G+ Q G++ +AL LF + E V
Sbjct: 438 -----------------------ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 474
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +L ACA+LA +++G+Q H +V++H + S FV N LI+MY KCG
Sbjct: 475 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHH----QYDSSAYFVANCLINMYSKCGD 530
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V+ +F++M ++ +SW +M+ G +G G+EAL +F KM G PD +T + VL A
Sbjct: 531 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 590
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH G+V++G YF SMS ++GL P +HY +DLL R G LD+A ++ MPM+P AV
Sbjct: 591 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAV 650
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W +LL+AC+VH N+ L E+ KL+E+ N G Y L+SN+YA GRW +V R+R LM+
Sbjct: 651 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 710
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASD 678
K G+ K+PGCSW++ F V D+ HPL+ +IY +L+ L +K +GYVP A
Sbjct: 711 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 770
Query: 679 DEAYEEQN 686
D EE+N
Sbjct: 771 DVDEEEKN 778
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 263/505 (52%), Gaps = 24/505 (4%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
++ L G D A + + WN ++ + R A+ +M L
Sbjct: 57 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
++ L AC ++ G+ H L+ + + S+V++ +AL+ MY +CG + A +FD
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 211 GMRER---NIVSWNSLITCYEQNGPASDALEVFVRMM------ASGIEPDEVTLASVVSA 261
+ +R +++SWNS+++ + ++ A AL++F +M + D +++ +++ A
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C SL A + ++H +R D+ +GNAL+D YAKCG + A VF+ M ++VVS
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 295
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLK 377
+MV+GY+++ + K+A +F M + N+ V+W A+IAGY+Q G + EAL +FR +
Sbjct: 296 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 355
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS----GEESDIFVGNSLI 433
P T ++L+ACA+L G + H + +K+ L L GE+ D+ V N+LI
Sbjct: 356 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 415
Query: 434 DMYMKCGSVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML--LCGEK 489
DMY KC S + IF+ + ER+ V+W MI G AQ G +AL LF +M+ G
Sbjct: 416 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 475
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAK 548
P+ T+ +L AC+H + G++ + + + H C++++ + G +D A+
Sbjct: 476 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 535
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVH 573
+ ++M Q A+ W S++ +H
Sbjct: 536 HVFDSMS-QKSAISWTSMMTGYGMH 559
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 197/439 (44%), Gaps = 80/439 (18%)
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
L + S +G+ ++ Y CG A V + + V WN LI + + G A
Sbjct: 42 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 101
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+ V RM+ +G D TL V+ AC L +++ G H L+ C +++ + NALV
Sbjct: 102 INVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVA 160
Query: 297 MYAKCGKLNEARCVFDRMP---IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
MY++CG L EA +FD + I +V+S S+VS + K+S+ +A +F+KM
Sbjct: 161 MYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM-------- 212
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
LI E + + + N+L AC +L + ++ H + ++
Sbjct: 213 -TLIVHEKPTNERSDIISIV----------------NILPACGSLKAVPQTKEVHGNAIR 255
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY- 472
+G FL D+FVGN+LID Y KCG +E+ ++F M +D VSWNAM+ G +Q+G
Sbjct: 256 NG-TFL-----DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF 309
Query: 473 ----------------------------------GTEALGLFKKMLLCGEKPDHVTMIGV 498
EAL +F++M+ G P+ VT+I V
Sbjct: 310 KAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISV 369
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH---------YTCMVDLLGRAGCLDEAKT 549
L AC+ G +G + + K L D Y ++D+ + A++
Sbjct: 370 LSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 429
Query: 550 LIEAMPMQP-DAVIWGSLL 567
+ + +P++ + V W ++
Sbjct: 430 IFDDIPLEERNVVTWTVMI 448
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/613 (38%), Positives = 351/613 (57%), Gaps = 50/613 (8%)
Query: 89 NSIITGLLKWGF--IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM--HS 144
N +I +L G + A +FA E D +WNSM+ F + AL + +M S
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N ++F S L CA ++FK+G +H + K SD+Y+ + L++MY CG +
Sbjct: 74 RNVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +F+ M RN V W S+I+ Y +N ++AL ++ +M G PDEVT+A++VSACA
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G+++H+ + R ++ VLG+ALV+MYAKCG L
Sbjct: 193 LKDLGVGMKLHSHI-REMDMKICAVLGSALVNMYAKCGDL-------------------- 231
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCP 383
K+AR +F K+ +++V +W+ALI GY +N + EAL LFR + S + P
Sbjct: 232 -----------KTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +++ACA L DL+ GR H ++ + + + + + NSLIDM+ KCG ++
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITR------TQKGHSVSLNNSLIDMFSKCGDID 334
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
RIF++M +D +SWN+M+ G A +G G EAL F+ M +PD +T IGVL ACS
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACS 394
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV+EG+K F + +G+ +HY CMVDLL RAG L EA+ I MP+QPD IW
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIW 454
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
GS+L AC+V+ N+ LGE A+ LL++EP+N G Y+LLSN+YA+ W EV +VR+LM ++
Sbjct: 455 GSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEK 514
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------ 677
G+ K PGCS + I + F+ D HP EI ++L+ + ++K GYV + S
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNI 574
Query: 678 DDEAYEEQNGSNS 690
DD EE +S
Sbjct: 575 DDNKKEESVSQHS 587
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 224/454 (49%), Gaps = 74/454 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL C + +H +++K S+++I+ L+++YA CG L AR +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++N W S+I+G +K + C +EAL
Sbjct: 138 ERMGHRNKVVWTSMISGYMK-----------------NHCP--------------NEALL 166
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ KM + F+ E + + +SACA D +G ++H+ + + +GSAL++MY
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYA 226
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTL 255
KCG + AR+VFD + ++++ +W++LI Y +N +++AL++F R +A G + P+EVT+
Sbjct: 227 KCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF-REVAGGSNMRPNEVTI 285
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+SACA L + G +H + R +K + + L N+L+DM++KCG ++ A+ +FD M
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS 344
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++++S SMV+G+A +G EAL FRL
Sbjct: 345 YKDLISWNSMVNGFA-------------------------------LHGLGREALAQFRL 373
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV-VKHGLRFLSGEESDIFVGNSLID 434
++ + P TF +L AC++ +Q G++ + +G+R S ++D
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYG------CMVD 427
Query: 435 MYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ + G + + M ++ D W +M+ C
Sbjct: 428 LLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 362/659 (54%), Gaps = 71/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C SV+ R VH +I F ++F+ + LI Y++ GC
Sbjct: 146 DKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGC-------- 197
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I DA LF MP +D WN M++G+ ++ + A G
Sbjct: 198 -----------------------IHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS--ALIDM 195
F++M + +F LS CA + G+Q+H L+ S D + + ALID+
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KC V AR++FD +IV ++I+ Y NG ++ALE+F ++ + + VTL
Sbjct: 295 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 354
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
ASV+ ACA LAA G ++H +++ +G+A++DMYAKCG+L+ A F
Sbjct: 355 ASVLPACAGLAALTLGKELHGHILK-NGHGGSCYVGSAIMDMYAKCGRLDLAHQTF---- 409
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ +++ V WN++I +QNG+ EEA+ LFR
Sbjct: 410 ---------------------------IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ 442
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + L+ACANL L G++ H +++ R SD+F ++LIDM
Sbjct: 443 MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR------SDLFAESALIDM 496
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG+++ CR+F+TM E++ VSWN++I +G ++L LF ML G +PDHVT
Sbjct: 497 YSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 556
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ ++ AC HAG V+EG YF M++E G+ +HY CMVDL GRAG L+EA +I +MP
Sbjct: 557 LAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMP 616
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
PDA +WG+LL AC++H N+ L E ++ L +++P NSG YVLLSN++A G+W V++
Sbjct: 617 FSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLK 676
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+R LM++RGV K PGCSWI++ ++F+ D+ HP + +IYL+LK L E+++ GYVP
Sbjct: 677 IRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 735
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 261/551 (47%), Gaps = 73/551 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C +S R+ HA+++ + + +L+ +Y CG A+ +F ++
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL---- 107
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
RL+ S P WN M+ GF +F AL ++ KM
Sbjct: 108 ---------------------RLWCSEP------WNWMIRGFTMMGQFDFALLFYFKMLG 140
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+Y+F + AC G +G VH + + DV++GS+LI Y + G +
Sbjct: 141 CGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHD 200
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +FD M ++ V WN ++ Y +NG +A VF+ M + P+ VT A V+S CAS
Sbjct: 201 ARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCAS 260
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGN--ALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
G Q+H L+ L D + N AL+D+Y KC + AR +FD+ ++V
Sbjct: 261 EIMINFGSQLHG-LVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVC 319
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
T+M+S GY NG N AL +FR L +E +
Sbjct: 320 TAMIS-------------------------------GYVLNGMNNNALEIFRWLLQERMR 348
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T ++L ACA LA L LG++ H H++K +G +VG++++DMY KCG +
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILK------NGHGGSCYVGSAIMDMYAKCGRL 402
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ + F + ++D V WN+MI C+QNG EA+ LF++M + G K D V++ L AC
Sbjct: 403 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 462
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++ + G++ + M + + L + ++D+ + G LD A + + M + + V
Sbjct: 463 ANLPALHYGKEIHAFMMRGAFRSDLFAE-SALIDMYSKCGNLDLACRVFDTME-EKNEVS 520
Query: 563 WGSLLAACKVH 573
W S++AA H
Sbjct: 521 WNSIIAAYGNH 531
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 186/418 (44%), Gaps = 44/418 (10%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L C G Q HA + + + +G+ L+ MY CG A+ +F +R
Sbjct: 51 SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
WN +I + G AL + +M+ G PD+ T V+ AC L + G +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++ + D+ +G++L+ Y++ G +++AR +FDRMP ++ V M++GY K
Sbjct: 171 DKI-QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK---- 225
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
NG+ + A G+F ++R P TF +L+ C
Sbjct: 226 ---------------------------NGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS--LIDMYMKCGSVEDGCRIFETMV 453
A+ + G Q H VV GL E D V N+ LID+Y KC VE +IF+
Sbjct: 259 ASEIMINFGSQLHGLVVSSGL------EMDSPVANTFALIDIYFKCRDVEMARKIFDQRT 312
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D V AMI G NG AL +F+ +L + + VT+ VL AC+ + G++
Sbjct: 313 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 372
Query: 514 YFSSMSKE-HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+ K HG + + ++D+ + G LD A + DAV W S++ +C
Sbjct: 373 LHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSC 427
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/533 (41%), Positives = 327/533 (61%), Gaps = 11/533 (2%)
Query: 147 FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
FAL +SF S L A + F G ++H L SK + D ++ + LI MY C R+ AR
Sbjct: 117 FALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDAR 176
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
+FD M + V+WN +I Y QNG DAL +F M +S ++PD V L +V+SAC
Sbjct: 177 LLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAG 236
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
G IH ++ D L AL++MYA CG ++ AR ++D + ++++ T+M+
Sbjct: 237 NLSYGRTIH-EFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAML 295
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTH 385
SGYAK VK AR +F +M+ER++V W+A+I+GY ++ + +EAL LF +L++ SV P
Sbjct: 296 SGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV-PDQ 354
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGL-RFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++++AC+++ L HT+V + G R LS V N+LIDMY KCG++
Sbjct: 355 ITMLSVISACSHVGALAQANWIHTYVDRSGFGRALS-------VNNALIDMYAKCGNLVK 407
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+FE M ++ +SW++MI A +G A+ LF++M +P+ VT IGVL AC H
Sbjct: 408 AREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGH 467
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
AGLVEEG K FSSM EHG++P ++HY CMVDL RA L +A LIE MP P+ +IWG
Sbjct: 468 AGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWG 527
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
SL++AC+VH LGE+ AK+LLE+EP + G V+LSN+YA+ RW +V +RK M +G
Sbjct: 528 SLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKG 587
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ K+ S IEI V++FM+ D+ H + EIY L + ++K VGY P+ S
Sbjct: 588 ISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTS 640
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 226/516 (43%), Gaps = 104/516 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F LL + + + + +H K F + FIQ LI +YA C + AR +
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLL 178
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKM + + WN II G + G DDA RLF M D
Sbjct: 179 FDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSD--------------------- 217
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
M ++ L + LSAC + + G +H + + Y+ D ++ +ALI+MY
Sbjct: 218 -----MKPDSVILC-----TVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMY 267
Query: 197 GKCGRVSCARRVFDG-------------------------------MRERNIVSWNSLIT 225
CG + AR+++DG M ER++V W+++I+
Sbjct: 268 ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMIS 327
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y ++ +AL++F M+ PD++T+ SV+SAC+ + A + IH + R R
Sbjct: 328 GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGR 387
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
L + NAL+DMYAKCG L +AR VF+ MP +NV+S +SM++ +A
Sbjct: 388 A-LSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA--------------- 431
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+G + A+ LFR +K ++ P TF +L AC + ++ G
Sbjct: 432 ----------------MHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE 475
Query: 406 QAHTHVV-KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
+ + ++ +HG+ ++D+Y + + + ETM + + W ++
Sbjct: 476 KLFSSMINEHGISPTREHYG------CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSL 529
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+ C +G LG F L +PDH + VL
Sbjct: 530 MSAC--QVHGEAELGEFAAKRLLELEPDHDGALVVL 563
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/594 (36%), Positives = 335/594 (56%), Gaps = 38/594 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +VF N+++ K G + A R+F M ++D ++N+M+ G ++ ++AL F
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++F S L+ AG +G QVHAL+ +S +V++ ++L+D Y KC
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ RR+FD M ER+ VS+N +I Y N A+ L +F M G + + A+++S
Sbjct: 287 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
SL G QIHA+L+ DL LGNAL+DMY+KCG L+ A+
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKS------------ 393
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F+ E++ +SW ALI GY QNG++EEAL LF ++R +
Sbjct: 394 -------------------NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF +++ A ++LA + LGRQ H+++++ SG +S +F G+ L+DMY KCG
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIR------SGYKSSVFSGSVLVDMYAKCGC 488
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+++ R F+ M ER+ +SWNA+I A G A+ +F+ ML CG PD VT + VL A
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GL +E KYF M ++ ++P K+HY C++D LGR GC + + ++ MP + D +
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI 608
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW S+L +C++H N L A KL +EP+++ PYV+LSN+YA G+W + V+K+MR
Sbjct: 609 IWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMR 668
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
RGV K+ G SW+EI + F D P+ EI L L +EM + GY P+
Sbjct: 669 DRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 231/505 (45%), Gaps = 92/505 (18%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+VHA +++S +F+ N L+D Y+KC CL R++FD+
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE-------------------- 296
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
MPERD S+N +++ +A + + L F +M F + + LS
Sbjct: 297 -----------MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS 345
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
D +G Q+HA L +S+ +G+ALIDMY KCG + A+ F E++ +S
Sbjct: 346 VAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAIS 405
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W +LIT Y QNG +AL++F M +G+ PD T +S++ A +SLA G Q+H+ L+
Sbjct: 406 WTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLI 465
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
R ++ + G+ LVDMYAKCG L+EA FD MP RN +S +++S YA K+A
Sbjct: 466 R-SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAI 524
Query: 340 LMFTKMLE----RNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCP--THY-----T 387
MF ML + V++ +++A + NG +E + F L+K + S+ P HY T
Sbjct: 525 KMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDT 584
Query: 388 FG-------------------------NLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G ++L++C + +L R A + E
Sbjct: 585 LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVA-------ADKLFGME 637
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER--------DWVSWNAMIVGCAQNGYGT 474
+D L ++Y + G ED + + M +R WV I A N +
Sbjct: 638 PTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTS 697
Query: 475 EALG--------LFKKMLLCGEKPD 491
+ L+K+M G KPD
Sbjct: 698 PMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A +L V +++HA+++ ASE + N LID+Y+KCG L A+ F
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S K+ +W ++ITG ++ G QH+ EAL F
Sbjct: 399 SEKSAISWTALITGYVQNG----------------------------QHE---EALQLFS 427
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M +F S + A + +G Q+H+ L +S Y S V+ GS L+DMY KCG
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A R FD M ERN +SWN++I+ Y G A +A+++F M+ G PD VT SV++
Sbjct: 488 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547
Query: 261 ACA 263
AC+
Sbjct: 548 ACS 550
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F+ ++ + + R++H+ +I+S + S +F + L+D+YAKCGCL A + F
Sbjct: 437 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHDRFS 133
D+M +N +WN++I+ +G +A ++F M D ++ S+++ + +
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSA 191
E + YF M +++S + AC ++G +QV +L + + +D + ++
Sbjct: 557 ECMKYFHLM-KHQYSISPW---KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 192 LIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDA 236
++ G AR D GM + + L Y + G DA
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 660
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 368/659 (55%), Gaps = 79/659 (11%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V+ +I LK G ID A +F ++PE+ +W +M+SG + R +L F +
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ N Y + LSAC+ + G Q+HA + + + D + + LID Y KCGR
Sbjct: 240 LMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A ++FDGM +NI+SW +L++ Y+QN +A+E+F M G++PD +S++++
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLR-----------NDLVLG 291
CASL A + G Q+HA ++ C+ L +D+VL
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419
Query: 292 NALVDMYAKCG---KLNEARCVFDRMPIR------------------------------- 317
NA+++ Y++ G +L++A +F M R
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 318 --------NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
++ + +++++ Y+ +K +RL+F +M +++V WN++ +GY Q ENEEA
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEA 539
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF L+ P +TF +++ A NLA LQLG++ H ++K GL E + ++
Sbjct: 540 LNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGL------ECNPYIT 593
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+DMY KCGS ED + F++ RD V WN++I A +G G +AL + +KM+ G +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIE 653
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+++T +GVL ACSHAGLVE+G K F M + G+ P +HY CMV LLGRAG L+EA+
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARE 712
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
LIE MP +P A++W SLL+ C N+ L EY A+ + +P +SG + LLSN+YA G
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGM 772
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
W + +VR+ M+ GVVK+PG SWIEI V++F+ KDK H +IY VL L +++
Sbjct: 773 WTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 269/556 (48%), Gaps = 81/556 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA+LL + VH +II S + ++ N L+++Y++ G + ARKVF+KM
Sbjct: 47 FARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKM- 105
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
PER+ +W++MVS H + E+L F+
Sbjct: 106 ------------------------------PERNLVTWSTMVSACNHHGFYEESLVVFLD 135
Query: 142 M-HSENFALSEYSFGSALSACAGSVDFK---MGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + +EY S + AC+G +D M Q+ + L KSR+ DVY+G+ LID Y
Sbjct: 136 FWRTRKNSPNEYILSSFIQACSG-LDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYL 194
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + AR VFD + E++ V+W ++I+ + G + +L++F ++M + PD L++
Sbjct: 195 KEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILST 254
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ L + G QIHA ++R D L N L+D Y KCG++ A +FD MP +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGH-EKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNK 313
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N++S T+++SGY QN ++EA+ LF +
Sbjct: 314 NIISWTTLLSGY-------------------------------KQNSLHKEAMELFTSMP 342
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P + ++L +CA+L L+ G Q H + +K L +D +V NSLIDMY
Sbjct: 343 KFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANL------GNDSYVTNSLIDMYA 396
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE---ALGLFKKMLLCGEKPDHVT 494
KC + + ++F+ D V +NAMI G ++ G E AL +F M +P +T
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLT 456
Query: 495 MIGVLCACSHAGLVEEG-RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ +L A A L G K + + GL + ++ + CL +++ + +
Sbjct: 457 FVSLLRAS--ASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDE 514
Query: 554 MPMQPDAVIWGSLLAA 569
M ++ D VIW S+ +
Sbjct: 515 MKVK-DLVIWNSMFSG 529
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 28/296 (9%)
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSG--------------YAKASSVKSARLMFTKMLE 347
+L + R + D + NVV +VSG Y++A + AR +F KM E
Sbjct: 48 ARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPE 107
Query: 348 RNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANL--ADLQLG 404
RN+V+W+ +++ +G EE+L +F + P Y + + AC+ L + +
Sbjct: 108 RNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMV 167
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
Q + +VK RF + D++VG LID Y+K G+++ +F+ + E+ V+W MI
Sbjct: 168 FQLQSFLVKS--RF----DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
GC + G +L LF +++ PD + VL ACS +E G++ + + + +G
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGH 280
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK---VHRNIM 577
++D + G + A L + MP + + W +LL+ K +H+ M
Sbjct: 281 EKDASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKNIISWTTLLSGYKQNSLHKEAM 335
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/697 (34%), Positives = 382/697 (54%), Gaps = 57/697 (8%)
Query: 39 RRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGL 95
R +HAR++ S + RLI +Y L A +F ++ + S++
Sbjct: 41 RCLHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLF--CADPCPVSATSLVAAY 98
Query: 96 LKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEY 152
+ A F ++P RD N+++S +A+ + A+ F + S + +Y
Sbjct: 99 AAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDY 158
Query: 153 SFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC----------- 199
SF + LSA ++ + Q+H + KS + + +AL+ +Y KC
Sbjct: 159 SFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARK 218
Query: 200 -----------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
G V AR VF+ + + V WN++I+ Y +G A +A
Sbjct: 219 VLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEA 278
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK---LRNDLVLGNA 293
E+F RM+ + DE T SV+SACA++ F G +H +++R + L + NA
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNA 338
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
LV Y+KCG + AR +FD M +++VVS +++SGY ++S + A +F +M +N +SW
Sbjct: 339 LVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSW 398
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+++GY G E+AL LF ++ E+V P YT+ + AC L L+ G+Q H H+V+
Sbjct: 399 MVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ 458
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G E GN+LI MY +CG+V++ +F M D VSWNAMI Q+G+G
Sbjct: 459 LGF------EGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHG 512
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EAL LF +M+ G PD ++ + VL AC+H+GLV+EG +YF SM ++ G+ P +DHYT
Sbjct: 513 REALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTR 572
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
++DLLGRAG + EA+ LI+ MP +P IW ++L+ C+ ++ LG + A +L ++ P +
Sbjct: 573 LIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQH 632
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
G Y+LLSN Y+ G W + RVRKLMR RGV K+PGCSWIE V+VF+V D +HP
Sbjct: 633 DGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEA 692
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQN 686
E+Y L+M+ +M+++GYVP+ D E +++++
Sbjct: 693 HEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEH 729
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 223/501 (44%), Gaps = 90/501 (17%)
Query: 18 DSSPFAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYG 72
D F LL + L + SV ++H ++KS + + N L+ +Y KC
Sbjct: 156 DDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRD 215
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARKV D+M NK+ TW +++ G ++ G + A +F + + WN+M+SG+
Sbjct: 216 ARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMA 275
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS----SDVYM 188
EA F +M E L E++F S LSACA F G VH + + + + + + +
Sbjct: 276 VEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPV 335
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN------------------ 230
+AL+ Y KCG ++ ARR+FD M +++VSWN++++ Y ++
Sbjct: 336 NNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395
Query: 231 -------------GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
G A DAL++F +M + ++P + T A ++AC L A K G Q+H
Sbjct: 396 LSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGH 455
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++ GNAL+ MYA+CG + EA +F MP + VS +M+S
Sbjct: 456 IVQL-GFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALG------- 507
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
Q+G EAL LF + E + P +F +L AC
Sbjct: 508 ------------------------QHGHGREALELFDRMVAEGIYPDRISFLTVLTAC-- 541
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESD--IFVGNS----LIDMYMKCGSVEDGCRIFET 451
H+ +V G R+ + D I G LID+ + G + + + +T
Sbjct: 542 ---------NHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKT 592
Query: 452 M-VERDWVSWNAMIVGCAQNG 471
M E W A++ GC +G
Sbjct: 593 MPFEPTPSIWEAILSGCRTSG 613
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 4/318 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASE--IFIQNRLIDV 63
+++V + LD F +L +C + + VH +II+ Q F E + + N L+
Sbjct: 283 RRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTF 342
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y+KCG + AR++FD M+ K+V +WN+I++G ++ +D A +F MP +++ SW MV
Sbjct: 343 YSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMV 402
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
SG+ +AL F KM SEN +Y++ A++AC K G Q+H + + +
Sbjct: 403 SGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFE 462
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
G+ALI MY +CG V A +F M + VSWN++I+ Q+G +ALE+F RM
Sbjct: 463 GSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM 522
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+A GI PD ++ +V++AC EG + + R + L+D+ + G+
Sbjct: 523 VAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGR 582
Query: 304 LNEARCVFDRMPIRNVVS 321
+ EAR + MP S
Sbjct: 583 IGEARDLIKTMPFEPTPS 600
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/714 (34%), Positives = 365/714 (51%), Gaps = 113/714 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F + +C S+S +HA + +S FAS +F+ N ++ +Y KCG L A +F
Sbjct: 258 DHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMF 317
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + ++ + +D SWNS+VS + + AL
Sbjct: 318 DDLCHRGI----------------------------QDLVSWNSVVSAYMWASDANTALA 349
Query: 138 YFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KM + + + S + L ACA G QVH +S DV++G+A++DMY
Sbjct: 350 LFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMY 409
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE------- 249
KCG++ A +VF M+ +++VSWN+++T Y Q G AL +F RM IE
Sbjct: 410 AKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWT 469
Query: 250 ----------------------------PDEVTLASVVSACASLAAFKEGLQIHARLMR- 280
P+ VTL S++SAC S+ A G + H ++
Sbjct: 470 AVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKF 529
Query: 281 ------CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
+ +DL + N L+DMYAKC AR +FD + +
Sbjct: 530 ILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPK----------------- 572
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR--ESVCPTHYTFGNLL 392
+R+VV+W +I GY Q+G+ AL LF + + +S+ P +T L
Sbjct: 573 ------------DRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCAL 620
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
ACA LA L+ GRQ H +V LR G +FV N LIDMY K G V+ +F+ M
Sbjct: 621 VACARLAALRFGRQVHAYV----LRNFYGSVM-LFVANCLIDMYSKSGDVDTAQIVFDNM 675
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
+R+ VSW +++ G +G G +AL +F +M PD +T + VL ACSH+G+V+ G
Sbjct: 676 PQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGI 735
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+F+ MSK+ G+ P +HY CMVDL GRAG L EA LI MPM+P V+W +LL+AC++
Sbjct: 736 NFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRL 795
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H N+ LGE+ A +LLE+E N G Y LLSN+YA RW +V R+R M++ G+ K+PGCS
Sbjct: 796 HSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCS 855
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDE 680
WI+ V F V D+ HP +++IY L L + +K +GYVP S DDE
Sbjct: 856 WIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDE 909
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 260/470 (55%), Gaps = 18/470 (3%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN ++ + + +M S + Y+F ACA +G +HA +S
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI---VSWNSLITCYEQNGPASD 235
+S ++S+V++ +A++ MYGKCG + A +FD + R I VSWNS+++ Y A+
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346
Query: 236 ALEVFVRMMASGI-EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
AL +F +M + PD ++L +++ ACASLAA G Q+H +R L +D+ +GNA+
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIR-SGLVDDVFVGNAV 405
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN----V 350
VDMYAKCGK+ EA VF RM ++VVS +MV+GY++A ++ A +F +M E N V
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDV 465
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
V+W A+I GY Q G+ EAL +FR + P T +LL+AC ++ L G++ H +
Sbjct: 466 VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCY 525
Query: 411 VVKHGLRFLSGEES---DIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIV 465
+K L L G + D+ V N LIDMY KC S E ++F+++ +RD V+W MI
Sbjct: 526 AIKFILN-LDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIG 584
Query: 466 GCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
G AQ+G AL LF M + KP+ T+ L AC+ + GR+ + + +
Sbjct: 585 GYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFY 644
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + C++D+ ++G +D A+ + + MP Q +AV W SL+ +H
Sbjct: 645 GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMH 693
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 172/378 (45%), Gaps = 41/378 (10%)
Query: 273 QIHAR-------LMRCEKLRNDLV---------LGNALVDMYA--KCGKLNEARCVFDRM 314
Q+H R L+RC +++ L+ L A + + A +C L A+ + +
Sbjct: 125 QLHHRYRCSISMLLRCFPIKSKLLQSQFTNTRLLSCATIPITALKECNSLAHAKLLHQQS 184
Query: 315 PIRNVVSE--TSMVSGYAKASSVKSARLMFTKMLER--NVVSWNALIAGYTQNGENEEAL 370
++ ++ T+++ Y ++S A L+ ++ +V WN LI G +
Sbjct: 185 IMQGLLFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVF 244
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
L+R +K P HYTF + ACANL+ L LG H V + SG S++FV N
Sbjct: 245 TLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSR------SGFASNVFVCN 298
Query: 431 SLIDMYMKCGSVEDGCRIFETMVER---DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+++ MY KCG++ +F+ + R D VSWN+++ AL LF KM
Sbjct: 299 AVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRH 358
Query: 488 -EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
PD ++++ +L AC+ GR+ S GL +VD+ + G ++E
Sbjct: 359 LMSPDVISLVNILPACASLAASLRGRQ-VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEE 417
Query: 547 AKTLIEAMPMQPDAVIWGSLLA----ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
A + + M + D V W +++ A ++ + L E + ++ +E++ + +
Sbjct: 418 ANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVT---WTAVIT 473
Query: 603 MYAELGRWGEVVRVRKLM 620
YA+ G+ E + V + M
Sbjct: 474 GYAQRGQGCEALDVFRQM 491
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/626 (39%), Positives = 351/626 (56%), Gaps = 56/626 (8%)
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
F+ LI + K G L+ A V + F N+I+ K G +D A LF M ER
Sbjct: 101 FVYIYLIKLAGKSGNLFHAY-VLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER 159
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
WNSM+SG + +EA+ F M + N
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPARN---------------------------- 191
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ ++++ Y K G + ARR FD M ER++VSWN++ + Y Q
Sbjct: 192 -----------IITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+AL +F +M+ GI PD+ T +S+C+S+ I R++ + + + + AL
Sbjct: 241 EALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI-LRMIDQKHIVLNSFVKTAL 299
Query: 295 VDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
+DM+AK G L AR +FD + RN V+ M+S Y + + AR +F M +R+VVSW
Sbjct: 300 LDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSW 359
Query: 354 NALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
N++IAGY QNGE+ ++ LF+ ++ + P T ++L+AC ++ L+L V
Sbjct: 360 NSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR 419
Query: 413 KHGLRF-LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ ++ +SG NSLI MY KCGSV D RIF+TM RD VS+N +I G A NG
Sbjct: 420 EKNIKLGISG-------FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANG 472
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+G EA+ L M G +PDHVT IGVL ACSHAGL+ EG+ F S+ AP DHY
Sbjct: 473 HGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHY 527
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDLLGRAG LDEAK LI++MPM+P A ++GSLL A ++H+ + LGE A KL E+EP
Sbjct: 528 ACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEP 587
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
N G YVLLSN+YA GRW +V RVR++M+K G+ K G SW+E G V+ F V D+ H
Sbjct: 588 QNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHE 647
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNAS 677
+K+IY +L L R+MKRVG+V + S
Sbjct: 648 QSKDIYKLLAELERKMKRVGFVADKS 673
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 96/429 (22%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
HA ++K + FI+N ++D+YAK G + AR +F++M+ + + WNS+I+G K G
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 102 DDASRLFASMPERDQCSWNSMVSG-------------------------------FAQHD 130
+A LF MP R+ +W SMV+G +AQ +
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
EAL F +M E + ++ +S+C+ D + + ++ + + ++ +
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 191 ALIDM--------------------------------YGKCGRVSCARRVFDGMRERNIV 218
AL+DM Y + G++S AR +FD M +R++V
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
SWNS+I Y QNG ++ ++E+F M++ I+PDEVT+ASV+SAC + A K +
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWV-LD 416
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++R + ++ + N+L+ MY+KCG + +A +F M R+VVS +++SG+A
Sbjct: 417 IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA------- 469
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
NG +EA+ L ++ E + P H T+ +L AC++
Sbjct: 470 ------------------------ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505
Query: 398 LADLQLGRQ 406
L G+
Sbjct: 506 AGLLNEGKN 514
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+FT + ++ ++ Y++ G + + + LF+ ++ P + + L+ +
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L H +V+K G D F+ N+++DMY K G V+ +FE M ER W
Sbjct: 116 L-----FHAYVLK------LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADW 164
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+MI GC ++G TEA+ LF M + +T ++ + G +E R+YF M +
Sbjct: 165 NSMISGCWKSGNETEAVVLFNMM----PARNIITWTSMVTGYAKMGDLESARRYFDEMPE 220
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKV----- 572
++ + M + C EA L M + PD W +++C
Sbjct: 221 RSVVS-----WNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPT 275
Query: 573 ----------HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELG 608
++I+L +V LL++ + G + N++ ELG
Sbjct: 276 LADSILRMIDQKHIVLNSFVKTALLDMH-AKFGNLEIARNIFDELG 320
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/674 (35%), Positives = 377/674 (55%), Gaps = 49/674 (7%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
+S+ D R HA IK+ S +F N+LI +Y+K G L A K+FD+M +NVFTWN+II
Sbjct: 2 RSIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAII 61
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF-SEALGYFVKMHSEN--FAL 149
+K + A LF S P +D ++NSM+SG+ D + + AL F++M S N +
Sbjct: 62 WAYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRI 121
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
E+S L+ A G Q+H+ + K+ + + S+LIDMY KCG +VF
Sbjct: 122 DEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVF 181
Query: 210 DG---------------------------------MRERNIVSWNSLITCYEQNGPASDA 236
DG + ++VSWN+LI+ Y QNG DA
Sbjct: 182 DGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDA 241
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
L++FV M + + +E T+A ++SACA L + K G ++H +++ E N + + LVD
Sbjct: 242 LKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFI-SSGLVD 300
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
+Y KCG + A V+ + N S TSM+ G++ ++ AR +F + E++ + W AL
Sbjct: 301 VYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTAL 360
Query: 357 IAGYTQNGENE---EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
GY ++ + E E L FR+ +E++ P ++L ACA A L G+Q H +V++
Sbjct: 361 FTGYVKSQQCEAVFELLSEFRV--KEAMVPDALILISVLGACAIQAALNPGKQIHAYVLR 418
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G+ E D + ++++DMY K G+++ +IF+ + RD V +N M G A +G+
Sbjct: 419 IGI------ELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHE 472
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
+A+ F++ML G +PD VT + +L AC H GLVE G KYF+SM+ ++ + P DHY C
Sbjct: 473 NQAIQQFEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMT-DYNILPEIDHYAC 531
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
M+DL GRA L++A ++ +P++PDAVI G+ L AC+++RN L +K+L IE N
Sbjct: 532 MIDLYGRANQLEKAVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDN 591
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
YV L+N+YA G+W E+ R+R+ MR+ + K GCSW+ + V++F D H
Sbjct: 592 GARYVQLANVYAAEGKWVEMGRIRRKMRENEIKKFAGCSWVYVENRVHIFTSGDSSHSSA 651
Query: 654 KEIYLVLKMLTREM 667
+ IY +L +LT E+
Sbjct: 652 EAIYSILLILTAEL 665
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 211/475 (44%), Gaps = 71/475 (14%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q + D +D ++L+ + S +++H+ ++K+ F + LID+Y+KCG
Sbjct: 113 QSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCG 172
Query: 69 CLYGARKVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLF-ASMPERDQCSWNSMVSGF 126
C +VFD + ++ + N+++ + G ++ LF + D SWN+++SG+
Sbjct: 173 CFREVCQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGY 232
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
Q+ +AL FV M +E++ LSACAG K+G +VH + K +
Sbjct: 233 VQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNP 292
Query: 187 YMGSALIDMYGKCGRVSC-------------------------------ARRVFDGMRER 215
++ S L+D+Y KCG + ARR+FD + E+
Sbjct: 293 FISSGLVDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEK 352
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+ + W +L T Y ++ E+ + + PD + L SV+ ACA AA G QI
Sbjct: 353 SSIIWTALFTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQI 412
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
HA ++R + D L +A+VDMY+K G + A +F R+ R+ V M +GYA
Sbjct: 413 HAYVLRI-GIELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGH 471
Query: 335 VKSARLMFTKMLERNV----VSWNALIA-----GYTQNGENEEA---------------- 369
A F +MLER V V++ AL++ G + GE A
Sbjct: 472 ENQAIQQFEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTDYNILPEIDHYAC 531
Query: 370 -LGLF----------RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+ L+ +KR + P G LNAC + +L R+A +++
Sbjct: 532 MIDLYGRANQLEKAVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILR 586
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 371/679 (54%), Gaps = 81/679 (11%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A L+DS S + R++HAR++ F+ +LI + G + AR+VFD
Sbjct: 22 SFYASLIDS---STHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDD 78
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ VF WN+++ G+++++ F +AL +
Sbjct: 79 LPRPQVF-------------------------------PWNAIIRGYSRNNHFQDALLMY 107
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
KM + ++F L AC G +MG VHA + + + +DV++ + LI +Y KC
Sbjct: 108 SKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKC 167
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
R+ CAR VF+G+ ER IVSW ++++ Y QNG +ALE+F +M ++PD V L S
Sbjct: 168 RRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVS 227
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++A L ++G IHA +M+ L + L +L MYAKCG+
Sbjct: 228 VLNAFTCLQDLEQGRSIHASVMKM-GLETEPDLLISLNTMYAKCGQ-------------- 272
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V +A+++F KM N++ WNA+I+GY +NG ++A+ LF +
Sbjct: 273 -----------------VATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMI 315
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V P + + ++ACA + L+ R +V + R D+F+ ++LIDM+
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYR------DDVFISSALIDMFA 369
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGSVE +F+ ++RD V W+AMIVG +G EA+ L++ M G P+ VT +G
Sbjct: 370 KCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLG 429
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+H+G+V EG +F+ M+ +H + P + HY C++DLLGRAG LD+A +I+ MP+Q
Sbjct: 430 LLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P +WG+LL+ACK HR++ LG+Y A++L I+PSN+G YV LSN+YA W V VR
Sbjct: 489 PGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++G+ K GCSW+E+ G + F V DK HP +EI ++ + +K G+V N
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKD 608
Query: 678 ------DDEAYEEQNGSNS 690
+DE EE S+S
Sbjct: 609 ASLHDLNDEEAEETLCSHS 627
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 216/454 (47%), Gaps = 68/454 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL +C + R VHA++ + F +++F+QN LI +YAKC L AR VF
Sbjct: 118 DSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +PER SW ++VS +AQ+ EAL
Sbjct: 178 EGLP-----------------------------LPERTIVSWTAIVSAYAQNGEPVEALE 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S L+A D + G +HA + K ++ + +L MY
Sbjct: 209 IFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V+ A+ +FD M+ N++ WN++I+ Y +NG A DA+++F M+ + PD +++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + + ++ + + R + R+D+ + +AL+DM+AKCG + AR VFDR R
Sbjct: 329 AISACAQVGSLEQARWMDEYVSRSD-YRDDVFISSALIDMFAKCGSVECARSVFDRTLDR 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV ++M I GY +G+ EA+ L+R ++
Sbjct: 388 DVVVWSAM-------------------------------IVGYGLHGQAREAISLYRAME 416
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R+ V P TF LL AC + ++ G + H + + +ID+
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYA------CIIDLLG 470
Query: 438 KCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQN 470
+ G ++ + + M + V+ W A++ C ++
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/657 (34%), Positives = 355/657 (54%), Gaps = 75/657 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + + +H ++K ++F+ N L+ +Y +C C+ AR VFDKM
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMM--- 156
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
ERD SW++M+ +++ F AL +M+
Sbjct: 157 ----------------------------ERDVVSWSTMIRSLSRNKEFDMALELIREMNF 188
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG----SALIDMYGKCG 200
SE + S ++ A + + +MG +HA + R S++ +MG +AL+DMY KCG
Sbjct: 189 MQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVI--RNSNNEHMGVPTTTALLDMYAKCG 246
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR++F+G+ ++ +VSW ++I ++ + ++F+RM I P+E+T+ S++
Sbjct: 247 HLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIV 306
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
C A + G Q+HA ++R L L ALVDMY KC
Sbjct: 307 ECGFTGALQLGKQLHAYILR-NGFSVSLALATALVDMYGKC------------------- 346
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S +++AR +F R+V+ W A+++ Y Q ++A LF ++
Sbjct: 347 ------------SDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V PT T +LL+ CA L LG+ H+++ K + E D + +L+DMY KCG
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV------EVDCILNTALVDMYAKCG 448
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ R+F + RD WNA+I G A +GYG EAL +F +M G KP+ +T IG+L
Sbjct: 449 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSHAGLV EG+K F M GL P +HY CMVDLLGRAG LDEA +I++MP++P+
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++WG+L+AAC++H+N LGE A +LLEIEP N G VL+SN+YA RW + VRK M
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ G+ K+PG S IE+ G V+ F++ D+ HP + I +L + R++ GYVP+ S
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTS 685
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/514 (28%), Positives = 242/514 (47%), Gaps = 63/514 (12%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L AC ++G ++H + K DV++G+AL+ MYG+C V AR VFD M ER
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++VSW+++I +N ALE+ M + P EV + S+V+ A A + G +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 276 ARLMRCEKLRNDLVLG----NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
A ++R N+ +G AL+DMYAKCG L AR +F+ + + VVS T+M++G
Sbjct: 219 AYVIRNS---NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG--- 272
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
++S RL EE LF ++ E++ P T +L
Sbjct: 273 --CIRSNRL--------------------------EEGTKLFIRMQEENIFPNEITMLSL 304
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ C LQLG+Q H +++++G + + +L+DMY KC + + +F++
Sbjct: 305 IVECGFTGALQLGKQLHAYILRNGFSV------SLALATALVDMYGKCSDIRNARALFDS 358
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
RD + W AM+ AQ +A LF +M G +P VT++ +L C+ AG ++ G
Sbjct: 359 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 418
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA-KTLIEAMPMQPDAVIWGSLLAAC 570
+ S + KE + T +VD+ + G ++ A + IEA + D +W +++
Sbjct: 419 KWVHSYIDKERVEVDCILN-TALVDMYAKCGDINAAGRLFIEA--ISRDICMWNAIITGF 475
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPY-VLLSNMYAELGRWGEVVRVRKLMRKR----GV 625
+H GE E+E P + + G V +KL K G+
Sbjct: 476 AMHG---YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 532
Query: 626 VKQP---GCSWIEILGHVNVFMVKDKRHPLNKEI 656
V Q GC +++LG + D+ H + K +
Sbjct: 533 VPQIEHYGCM-VDLLGRAGLL---DEAHEMIKSM 562
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/595 (37%), Positives = 341/595 (57%), Gaps = 38/595 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N I+ L +G + + +F+ + E + WN+M+ G D F +A+ +
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + ++ L ACA +D ++G ++H+LL K+ Y DV++ ++L+ +Y KC
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
A +VFD + ++N+VSW ++IT Y +G +A+ F +++ G++PD +L V++A
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L G I R + D RNV
Sbjct: 225 CARLGDCTSGEWID--------------------------------RYISDSGMGRNVFV 252
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
TS++ Y K +++ A L+F+ M E+++VSW+ +I GY NG ++AL LF ++ E++
Sbjct: 253 ATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +L+ACA L L LG A + + ++ FLS +G +LIDMY KCGS
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRN--EFLSNP----VLGTALIDMYSKCGS 366
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V IF M ++D V WNAM+VG + NG+ LF + G +PD T IG+LC
Sbjct: 367 VTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+H G V EGR++F++M + L P +HY CMVDLLGRAG L+EA LI MPM+P+AV
Sbjct: 427 CTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL CK+H++ L E V KKL+E+EP NSG YV LSN+Y+ RW E ++R M+
Sbjct: 487 VWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
++ + K CSWIEI G V+ F+V DK H L+++IY L L RE+K VG+VP
Sbjct: 547 EQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTT 601
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 218/465 (46%), Gaps = 71/465 (15%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L +C R V ++H+ ++K+ + ++F++ L+ +Y KC A KVFD +
Sbjct: 118 PF--VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDI 175
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+KNV +W +IITG + G F EA+G F
Sbjct: 176 PDKNVVSWTAIITGYISSG-------------------------------HFREAIGAFK 204
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
K+ +S L+ACA D G + +S S +V++ ++L+DMY KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +F M E++IVSW+++I Y NG AL++F +M + ++PD T+ V+S
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA+L A G+ + + R E L N VLG AL+DMY+KCG
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNP-VLGTALIDMYSKCG------------------ 365
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
SV A +FT M +++ V WNA++ G + NG + LF L+++
Sbjct: 366 -------------SVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF LL C + + GRQ ++ R S S G ++D+ + G
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMK----RVFSLTPSIEHYG-CMVDLLGRAG 467
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ + ++ M ++ + V W A++ GC + A + KK++
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 163/335 (48%), Gaps = 15/335 (4%)
Query: 60 LIDVYAKCG----CLYGA---RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
L+ V A C C G R + D +NVF S++ +K G ++ A+ +F++MP
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
E+D SW++M+ G+A + +AL F +M SEN Y+ LSACA +G
Sbjct: 278 EKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW 337
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+L+ ++ + S+ +G+ALIDMY KCG V+ A +F M++++ V WN+++ NG
Sbjct: 338 ASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGH 397
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
A +F + GI PDE T ++ C EG Q + R L +
Sbjct: 398 AKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG 457
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+VD+ + G LNEA + + MP++ N V +++ G A + K++E +
Sbjct: 458 CMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE--LE 515
Query: 352 SWNA-----LIAGYTQNGENEEALGLFRLLKRESV 381
WN+ L Y+ N EEA + +K + +
Sbjct: 516 PWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQI 550
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/642 (35%), Positives = 353/642 (54%), Gaps = 72/642 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+VHA+ IKS + +QN L+ +Y+K G
Sbjct: 166 RQVHAQAIKSDNGGHLIVQNALVTMYSKSGS----------------------------- 196
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA-LSEYSFGSA 157
+ D LF + ++D SW S+++G AQ R +AL F +M +E +E+ FGS
Sbjct: 197 --VGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSV 254
Query: 158 LSACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
AC+ ++ + G Q+H L K + + Y G +L DMY +C ++ A +VF + +
Sbjct: 255 FRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPD 314
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNSLI + +G S+A+ +F M S ++PD +T+ +++ AC A ++G IH+
Sbjct: 315 LVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHS 374
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
L++ L D+++ N+L+ MY +C A VF ET+
Sbjct: 375 YLVKL-GLGGDVMVCNSLISMYTRCLDFPSAMDVFH---------ETN------------ 412
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+R+VV+WN+++ Q+ E+ LFRLL + N+L+A A
Sbjct: 413 ----------DRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASA 462
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VER 455
L ++ +Q H + K GL SD + N+LID Y KCGS++D ++FE M R
Sbjct: 463 ELGYFEMAKQVHAYAFKVGL------VSDAILSNALIDTYAKCGSLDDANKLFEIMGTGR 516
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D SW+++IVG AQ GY EAL LF +M G KP+HVT +GVL ACS GLV+EG Y+
Sbjct: 517 DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYY 576
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
S M E+G+ P K+H +C++DLL RAG L EA ++ MP +PD ++W +LLAA + H +
Sbjct: 577 SIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHND 636
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ +G+ A+ +L I+PS+S YVLL N+YA G W E R++K MR GV K PG SWI+
Sbjct: 637 VEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIK 696
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ G + VF+V+D+ HP + E+Y +L ++ EM + GY+P S
Sbjct: 697 LKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAGYIPELS 738
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 20/260 (7%)
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN + +++ Y + ++ SAR++F ML+RN VSW A+IA + QN +A+GLF +
Sbjct: 78 RNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM 137
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R P + G+ + ACA L DL LGRQ H +K S + V N+L+ MY
Sbjct: 138 LRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIK------SDNGGHLIVQNALVTMY 191
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVTM 495
K GSV DG +FE + ++D SW ++I G AQ G +AL +F++M+ G P+
Sbjct: 192 SKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHF 251
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL----KDHYT--CMVDLLGRAGCLDEAKT 549
V ACS +V +Y + HGL ++ Y + D+ R LD A
Sbjct: 252 GSVFRACS---VVINSLEYGEQI---HGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMK 305
Query: 550 LIEAMPMQPDAVIWGSLLAA 569
+ + PD V W SL+ A
Sbjct: 306 VFYRIE-SPDLVSWNSLINA 324
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 395 CANLADLQLGRQAHTHVVKH--GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
C+ L GR H H++ G +L+ + + N LI MY +C + + +F+ M
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLA---RNTILSNHLITMYGRCAAPDSARMVFDGM 106
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
++R+ VSW A+I AQN +A+GLF ML G PD + + AC+ G + GR
Sbjct: 107 LDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGR 166
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ + K L +V + ++G + + L E + D WGS++A
Sbjct: 167 QVHAQAIKSDNGGHLIVQ-NALVTMYSKSGSVGDGFALFERI-RDKDLFSWGSIIA 220
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 328/575 (57%), Gaps = 47/575 (8%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+++A ++F +PE + WN+M G++Q++ + + F +M + + ++F L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C K G +VH + KS + ++ ++ + LIDMY G + A RVF M ERN+++W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
++I Y +T +V+A RL
Sbjct: 121 TAMINGY-------------------------ITCCDLVTA--------------RRLFD 141
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
R D+VL N ++ Y + + AR +FD+MP ++V+S ++++GYA V +
Sbjct: 142 LAPER-DIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACER 200
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLA 399
+F +M ERNV SWNALI GYT+NG E L F R+L +V P T N+L+ACA L
Sbjct: 201 LFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLG 260
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L LG+ H + HG + +++V N+L+DMY KCG VE +F++M +D +S
Sbjct: 261 ALDLGKWVHVYAESHGYK------GNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLIS 314
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WN +I G A +G+G +AL LF M + GE PD +T IG+LCAC+H GLVE+G YF SM+
Sbjct: 315 WNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMT 374
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
++ + P +HY C+VDLLGRAG L A I MP++ DAVIW +LL AC+V++N+ L
Sbjct: 375 DDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELA 434
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E +KL+E EP N YV+LSN+Y + GRW +V R++ MR G K PGCS IE+ +
Sbjct: 435 ELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVNDY 494
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+ F D+RHP ++IY L+ LT+ ++ GYVP
Sbjct: 495 LVEFYSLDERHPEKEQIYGTLRTLTKLLRSSGYVP 529
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 196/463 (42%), Gaps = 94/463 (20%)
Query: 17 LDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
LD P F +L SC++ ++ + VH +IKS F + F+ LID+YA G ++
Sbjct: 45 LDVMPNCFTFPVILKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHA 104
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A +VF +M +NV W ++I G + + A RLF PERD WN+M+SG+ +
Sbjct: 105 AYRVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDV 164
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
A F KM ++ DV + +
Sbjct: 165 IRARELFDKMPNK---------------------------------------DVMSWNTV 185
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPD 251
++ Y G V R+F+ M ERN+ SWN+LI Y +NG S+ L F RM+ G + P+
Sbjct: 186 LNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPN 245
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+ TL +V+SACA L A G +H + ++ + NAL+DMYAKCG + A VF
Sbjct: 246 DATLVNVLSACARLGALDLGKWVHV-YAESHGYKGNVYVRNALMDMYAKCGVVETALDVF 304
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
M ++++ SWN +I G +G +AL
Sbjct: 305 KSMDNKDLI-------------------------------SWNTIIGGLAVHGHGADALN 333
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV--- 428
LF +K P TF +L AC H +V+ G + D +
Sbjct: 334 LFSHMKIAGENPDGITFIGILCAC-----------THMGLVEDGFSYFKSMTDDYSIVPR 382
Query: 429 ---GNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G + M +E D V W A++ C
Sbjct: 383 IEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGAC 425
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
+I + N +I Y + + AR++FDKM NK+V +WN+++ G G + RLF MP
Sbjct: 147 DIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMP 206
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGT 171
ER+ SWN+++ G+ ++ FSE L F +M + + ++ + + LSACA +G
Sbjct: 207 ERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGK 266
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
VH Y +VY+ +AL+DMY KCG V A VF M ++++SWN++I +G
Sbjct: 267 WVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHG 326
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+DAL +F M +G PD +T ++ AC + ++G + + +
Sbjct: 327 HGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHY 386
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+VD+ + G L A +MPI + V +++ +V+ A L K++E
Sbjct: 387 GCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIE 443
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ +V + + +L +C R ++ + VH + ++++N L+D+YAKC
Sbjct: 235 RMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKC 294
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
G + A VF M NK++ +WN+II GL G DA LF+ M
Sbjct: 295 GVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHM 338
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 336/596 (56%), Gaps = 38/596 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +VF N+++ K G + A R+F M ++D ++N+M+ G ++ ++AL F
Sbjct: 167 DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAA 226
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + ++F S L+ AG +G QVHAL+ +S +V++ ++L+D Y KC
Sbjct: 227 MRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC 286
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ RR+FD M ER+ VS+N +I Y N A+ L +F M G + + A+++S
Sbjct: 287 LDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSV 346
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
SL G QIHA+L+ DL LGNAL+DMY+KCG L+ A+
Sbjct: 347 AGSLPDVHIGKQIHAQLVLLGLASEDL-LGNALIDMYSKCGMLDAAKS------------ 393
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F+ E++ +SW ALI GY QNG++EEAL LF ++R +
Sbjct: 394 -------------------NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGL 434
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF +++ A ++LA + LGRQ H+++++ SG +S +F G+ L+DMY KCG
Sbjct: 435 RPDRATFSSIIKASSSLAMIGLGRQLHSYLIR------SGYKSSVFSGSVLVDMYAKCGC 488
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+++ R F+ M ER+ +SWNA+I A G A+ +F+ ML CG PD VT + VL A
Sbjct: 489 LDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAA 548
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GL +E KYF M ++ ++P K+HY C++D LGR GC + + ++ MP + D +
Sbjct: 549 CSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI 608
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW S+L +C++H N L A KL +EP+++ PYV+LSN+YA G+W + V+K+MR
Sbjct: 609 IWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMR 668
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
RGV K+ G SW+EI + F D P+ EI L L +EM + GY P+ +
Sbjct: 669 DRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 724
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 231/506 (45%), Gaps = 92/506 (18%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+VHA +++S +F+ N L+D Y+KC CL R++FD+
Sbjct: 256 HQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDE------------------- 296
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
MPERD S+N +++ +A + + L F +M F + + L
Sbjct: 297 ------------MPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
S D +G Q+HA L +S+ +G+ALIDMY KCG + A+ F E++ +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW +LIT Y QNG +AL++F M +G+ PD T +S++ A +SLA G Q+H+ L
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R ++ + G+ LVDMYAKCG L+EA FD MP RN +S +++S YA K+A
Sbjct: 465 IR-SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNA 523
Query: 339 RLMFTKMLE----RNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCP--THY----- 386
MF ML + V++ +++A + NG +E + F L+K + S+ P HY
Sbjct: 524 IKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVID 583
Query: 387 TFG-------------------------NLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
T G ++L++C + +L R A +
Sbjct: 584 TLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVA-------ADKLFGM 636
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER--------DWVSWNAMIVGCAQNGYG 473
E +D L ++Y + G ED + + M +R WV I A N
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696
Query: 474 TEALG--------LFKKMLLCGEKPD 491
+ + L+K+M G KPD
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A +L V +++HA+++ ASE + N LID+Y+KCG L A+ F
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S K+ +W ++ITG ++ G QH+ EAL F
Sbjct: 399 SEKSAISWTALITGYVQNG----------------------------QHE---EALQLFS 427
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M +F S + A + +G Q+H+ L +S Y S V+ GS L+DMY KCG
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A R FD M ERN +SWN++I+ Y G A +A+++F M+ G PD VT SV++
Sbjct: 488 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 547
Query: 261 ACA 263
AC+
Sbjct: 548 ACS 550
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F+ ++ + + R++H+ +I+S + S +F + L+D+YAKCGCL A + F
Sbjct: 437 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 496
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHDRFS 133
D+M +N +WN++I+ +G +A ++F M D ++ S+++ + +
Sbjct: 497 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 556
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSA 191
E + YF M +++S + AC ++G +QV +L + + +D + ++
Sbjct: 557 ECMKYFHLM-KHQYSISPW---KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612
Query: 192 LIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDA 236
++ G AR D GM + + L Y + G DA
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 660
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/675 (35%), Positives = 376/675 (55%), Gaps = 77/675 (11%)
Query: 6 SVKQIVGDLAFLDSSP-FAKLLDSCLRSKSVSDTR-----RVHARIIKSQFASEIFIQNR 59
S ++ GD+ P FA L +C S S +++ ++H +K SE+ + N
Sbjct: 230 SAVELFGDMRASGCEPNFATL--ACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
L+ +YAKC CL DD +LF MP D +W
Sbjct: 288 LVSMYAKCKCL-------------------------------DDGWKLFGLMPRDDLVTW 316
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N M+SG Q+ +AL F M + S L A F G ++H + +
Sbjct: 317 NGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVR 376
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ DV++ SAL+D+Y KC V A+ V+D + ++V +++I+ Y NG + +A+++
Sbjct: 377 NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKM 436
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F ++ GI P+ V +ASV+ ACAS+AA K G ++H+ ++ + +AL+DMYA
Sbjct: 437 FRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK-NAYEGRCYVESALMDMYA 495
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG+L+ +S Y +F+K+ ++ V+WN++I+
Sbjct: 496 KCGRLD--------------------LSHY-----------IFSKISAKDEVTWNSMISS 524
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ QNGE EEAL LFR + E V ++ T ++L+ACA+L + G++ H V+K +R
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIR-- 582
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+D+F ++LIDMY KCG++E R+FE+M E++ VSWN++I G E++ L
Sbjct: 583 ----ADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
+ M G K DHVT + ++ AC+HAG V+EG + F M++E+ +AP +H+ CMVDL
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYS 698
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
RAG LD+A LI MP +PDA IWG+LL AC+VHRN+ L E +++L +++P NSG YVL
Sbjct: 699 RAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVL 758
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLV 659
+SN+ A GRW V +VR+LM+ V K PG SW+++ ++F+ DK HP +++IY+
Sbjct: 759 MSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMS 818
Query: 660 LKMLTREMKRVGYVP 674
LK + E++ GY+P
Sbjct: 819 LKSILLELREEGYIP 833
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 263/552 (47%), Gaps = 71/552 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F ++ SC +++ R VH ++F+ + LI +YA G L+ AR+V
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV- 203
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F M ERD WN M+ G+ + S A+
Sbjct: 204 ------------------------------FDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + + + LS A D G Q+H L K S+V + + L+ MY
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + ++F M ++V+WN +I+ QNG AL +F M SGI PD VTL S
Sbjct: 294 KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVS 353
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A L F +G ++H ++R + D+ L +ALVD+Y KC + A+ V+D
Sbjct: 354 LLPALTDLNGFNQGKELHGYIVR-NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAI 412
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV ++M+SG Y NG ++EA+ +FR L
Sbjct: 413 DVVIGSTMISG-------------------------------YVLNGMSQEAVKMFRYLL 441
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P ++L ACA++A ++LG++ H++ +K+ E +V ++L+DMY
Sbjct: 442 EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY------EGRCYVESALMDMYA 495
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ IF + +D V+WN+MI AQNG EAL LF++M + G K +VT+
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISS 555
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+ + G++ + K A L + ++D+ G+ G L+ A + E+MP +
Sbjct: 556 VLSACASLPAIYYGKEIHGVVIKGPIRADLFAE-SALIDMYGKCGNLEWAHRVFESMP-E 613
Query: 558 PDAVIWGSLLAA 569
+ V W S++A+
Sbjct: 614 KNEVSWNSIIAS 625
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 256/558 (45%), Gaps = 91/558 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+L C+ +S +VH R + + A++ +Q RL+ +Y AR+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVL------ARR-------- 90
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCS--WNSMVSGFAQHDRFSEALGYFV 140
DA +F+S+P C+ WN ++ G + AL +++
Sbjct: 91 -----------------FRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133
Query: 141 KM--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
KM H ++F + +CA +G VH D+++GSALI MY
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + AR+VFDGM ER+ V WN ++ Y + G S A+E+F M ASG EP+ TLA
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S A+ + G+Q+H ++ L +++ + N LV MYAKC L++ +F MP +
Sbjct: 254 LSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDD 312
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V+ M+S G QNG ++AL LF +++
Sbjct: 313 LVTWNGMIS-------------------------------GCVQNGFVDQALLLFCDMQK 341
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T +LL A +L G++ H ++V++ + D+F+ ++L+D+Y K
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM------DVFLVSALVDIYFK 395
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
C +V ++++ D V + MI G NG EA+ +F+ +L G +P+ V + V
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLI 551
L AC+ ++ G++ S LK+ Y + ++D+ + G LD + +
Sbjct: 456 LPACASMAAMKLGQELHSY--------ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507
Query: 552 EAMPMQPDAVIWGSLLAA 569
+ + D V W S++++
Sbjct: 508 SKISAK-DEVTWNSMISS 524
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 139/328 (42%), Gaps = 49/328 (14%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD LA V+ C S + GLQ+H R + D L LV MY + +A
Sbjct: 38 PDRRLLA-VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF +P G A + + WN LI G T G+ A
Sbjct: 97 VFSSLP-----------RGAAACA-----------------LPWNWLIRGLTMAGDYRSA 128
Query: 370 LGLFRL---LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L LF L + P +TF ++ +CA L + LGR H GL + D+
Sbjct: 129 L-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGL------DGDM 181
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FVG++LI MY G + D ++F+ M ERD V WN M+ G + G + A+ LF M
Sbjct: 182 FVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRAS 241
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFS----SMSKEHGLAPLKDHYTCMVDLLGRAG 542
G +P+ T+ AC + E +F +++ ++GL +V + +
Sbjct: 242 GCEPNFATL-----ACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCK 296
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
CLD+ L MP + D V W +++ C
Sbjct: 297 CLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/595 (37%), Positives = 340/595 (57%), Gaps = 38/595 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N I+ L +G + + +F+ + E + WN+M+ G D F +A+ +
Sbjct: 45 DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + ++ L ACA +D ++G ++H+LL K+ Y DV++ ++L+ +Y KC
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
A +VFD + ++N+VSW ++IT Y +G +A+ F +++ G++PD +L V++A
Sbjct: 165 FDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAA 224
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L G I R + D RNV
Sbjct: 225 CARLGDCTSGEWID--------------------------------RYISDSGMGRNVFV 252
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
TS++ Y K +++ A L+F+ M E+++VSW+ +I GY NG ++AL LF ++ E++
Sbjct: 253 ATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENL 312
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P YT +L+ACA L L LG A + + ++ FLS +G +LIDMY KCGS
Sbjct: 313 KPDCYTMVGVLSACATLGALDLGIWASSLMDRN--EFLSNP----VLGTALIDMYSKCGS 366
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V IF M +D V WNAM+VG + NG+ LF + G +PD T IG+LC
Sbjct: 367 VTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+H G V EGR++F++M + L P +HY CMVDLLGRAG L+EA LI MPM+P+AV
Sbjct: 427 CTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAV 486
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL CK+H++ L E V KKL+E+EP NSG YV LSN+Y+ RW E ++R M+
Sbjct: 487 VWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMK 546
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
++ + K CSWIEI G V+ F+V DK H L+++IY L L RE+K VG+VP
Sbjct: 547 EQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTT 601
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 217/465 (46%), Gaps = 71/465 (15%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L +C R V ++H+ ++K+ + ++F++ L+ +Y KC A KVFD +
Sbjct: 118 PF--VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDI 175
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+KNV +W +IITG + G F EA+G F
Sbjct: 176 PDKNVVSWTAIITGYISSG-------------------------------HFREAIGAFK 204
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
K+ +S L+ACA D G + +S S +V++ ++L+DMY KCG
Sbjct: 205 KLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCG 264
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +F M E++IVSW+++I Y NG AL++F +M + ++PD T+ V+S
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA+L A G+ + + R E L N VLG AL+DMY+KCG
Sbjct: 325 ACATLGALDLGIWASSLMDRNEFLSNP-VLGTALIDMYSKCG------------------ 365
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
SV A +FT M ++ V WNA++ G + NG + LF L+++
Sbjct: 366 -------------SVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF LL C + + GRQ ++ R S S G ++D+ + G
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMK----RVFSLTPSIEHYG-CMVDLLGRAG 467
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ + ++ M ++ + V W A++ GC + A + KK++
Sbjct: 468 LLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 162/335 (48%), Gaps = 15/335 (4%)
Query: 60 LIDVYAKCG----CLYGA---RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
L+ V A C C G R + D +NVF S++ +K G ++ A+ +F++MP
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
E+D SW++M+ G+A + +AL F +M SEN Y+ LSACA +G
Sbjct: 278 EKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW 337
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+L+ ++ + S+ +G+ALIDMY KCG V+ A +F M+ ++ V WN+++ NG
Sbjct: 338 ASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGH 397
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
A +F + GI PDE T ++ C EG Q + R L +
Sbjct: 398 AKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG 457
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+VD+ + G LNEA + + MP++ N V +++ G A + K++E +
Sbjct: 458 CMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE--LE 515
Query: 352 SWNA-----LIAGYTQNGENEEALGLFRLLKRESV 381
WN+ L Y+ N EEA + +K + +
Sbjct: 516 PWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQI 550
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/673 (34%), Positives = 357/673 (53%), Gaps = 42/673 (6%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++V D D + +L +C + + + +H +K +F+ N L+++Y C
Sbjct: 231 REMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESC 290
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
C+ A+ VFD M P R+ +WNS+ S +
Sbjct: 291 LCVREAQAVFDLM-------------------------------PHRNVITWNSLASCYV 319
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ L F +M + S L AC+ D K G +H K DV+
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF 379
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +AL+++Y C V A+ VFD M RN+V+WNSL +CY G L VF M+ +G
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG 439
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++PD VT+ S++ AC+ L K G IH +R + D+ + NAL+ +YAKC + EA
Sbjct: 440 VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR-HGMVEDVFVCNALLSLYAKCVCVREA 498
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQN 363
+ VFD +P R V S +++ Y + MF++M ++ + ++W+ +I G +N
Sbjct: 499 QVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKN 558
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
EEA+ +FR ++ P T ++L AC+ L++G++ H +V +H ++
Sbjct: 559 SRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHW------KD 612
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
D+ N+L+DMY KCG + +F+ M +D SWN MI +G G EAL LF+KM
Sbjct: 613 WDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM 672
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
LL KPD T VL ACSH+ LVEEG + F+SMS++H + P +HYTC+VD+ RAGC
Sbjct: 673 LLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGC 732
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNM 603
L+EA I+ MPM+P A+ W + LA C+V++N+ L + AKKL EI+P+ S YV L N+
Sbjct: 733 LEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNI 792
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
W E ++RKLM++RG+ K PGCSW + V+ F+ DK + + +IY L L
Sbjct: 793 LVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDEL 852
Query: 664 TREMKRVGYVPNA 676
++K GY P+
Sbjct: 853 FAKIKAAGYKPDT 865
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 263/571 (46%), Gaps = 75/571 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F + +C S+ ++ H + S++ I N I Y KC C+ GAR+VF
Sbjct: 39 DKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVF 98
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + RD +WNS+ + + + L
Sbjct: 99 DDLV-------------------------------ARDVVTWNSLSACYVNCGFPQQGLN 127
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM + + S L C+ D K G ++H + + DV++ SA ++ Y
Sbjct: 128 VFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYA 187
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC V A+ VFD M R++V+WNSL +CY G L VF M+ G++PD VT++
Sbjct: 188 KCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSC 247
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC+ L K G IH ++ + N V NALV++Y C + EA+ VFD MP R
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFV-SNALVNLYESCLCVREAQAVFDLMPHR 306
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N V++WN+L + Y G ++ L +FR +
Sbjct: 307 N-------------------------------VITWNSLASCYVNCGFPQKGLNVFREMG 335
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P ++L AC+ L DL+ G+ H VKHG+ D+FV +L+++Y
Sbjct: 336 LNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV------EDVFVCTALVNLYA 389
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
C V + +F+ M R+ V+WN++ G+ + L +F++M+L G KPD VTM+
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLS 449
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMP 555
+L ACS ++ G K + HG+ ++D + C ++ L + C+ EA+ + + +P
Sbjct: 450 ILHACSDLQDLKSG-KVIHGFAVRHGM--VEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+ + W +L A ++ G Y+ ++
Sbjct: 507 HR-EVASWNGILTAYFTNKEYEKGLYMFSQM 536
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 227/447 (50%), Gaps = 45/447 (10%)
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
H +EA+ + + + F + ACA S D Q H ++ SDV +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+A I YGKC V ARRVFD + R++V+WNSL CY G L VF +M + +
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ + +T++S++ C+ L K G +IH ++R + D+ + +A V+ YAKC + EA+
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVR-HGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VFD MP R+ VV+WN+L + Y G ++
Sbjct: 197 TVFDLMPHRD-------------------------------VVTWNSLSSCYVNCGFPQK 225
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
L +FR + + V P T +L+AC++L DL+ G+ H +KHG+ ++FV
Sbjct: 226 GLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMV------ENVFV 279
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
N+L+++Y C V + +F+ M R+ ++WN++ G+ + L +F++M L G
Sbjct: 280 SNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGV 339
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDE 546
KPD + M +L ACS ++ G K + +HG+ ++D + C +V+L C+ E
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSG-KTIHGFAVKHGM--VEDVFVCTALVNLYANCLCVRE 396
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
A+T+ + MP + + V W S L++C V+
Sbjct: 397 AQTVFDLMPHR-NVVTWNS-LSSCYVN 421
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/626 (39%), Positives = 351/626 (56%), Gaps = 56/626 (8%)
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
F+ LI + K G ++ A V + F N+I+ K G +D A LF M ER
Sbjct: 101 FVYIYLIKLAGKSGNMFHAY-VLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAER 159
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
WNSM+SG + +EA+ F M + N
Sbjct: 160 TLADWNSMISGCWKSGNETEAVVLFNMMPARN---------------------------- 191
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ ++++ Y K G + ARR FD M ER++VSWN++ + Y Q
Sbjct: 192 -----------IITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPK 240
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+AL +F +M+ GI PD+ T +S+C+S+ I R++ + + + + AL
Sbjct: 241 EALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSI-LRMIDQKHIVLNSFVKTAL 299
Query: 295 VDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
+DM+AK G L AR +FD + RN V+ M+S Y + + AR +F M +R+VVSW
Sbjct: 300 LDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSW 359
Query: 354 NALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
N++IAGY QNGE+ ++ LF+ ++ + P T ++L+AC ++ L+L V
Sbjct: 360 NSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR 419
Query: 413 KHGLRF-LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ ++ +SG NSLI MY KCGSV D RIF+TM RD VS+N +I G A NG
Sbjct: 420 EKNIKLGISG-------FNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANG 472
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+G EA+ L M G +PDHVT IGVL ACSHAGL+ EG+ F S+ AP DHY
Sbjct: 473 HGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHY 527
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDLLGRAG LDEAK LI++MPM+P A ++GSLL A ++H+ + LGE A KL E+EP
Sbjct: 528 ACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEP 587
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
N G YVLLSN+YA GRW +V RVR++M+K G+ K G SW+E G V+ F V D+ H
Sbjct: 588 QNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHE 647
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNAS 677
+K+IY +L L R+MKRVG+V + S
Sbjct: 648 QSKDIYKLLAELERKMKRVGFVADKS 673
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 96/429 (22%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
HA ++K + FI+N ++D+YAK G + AR +F++M+ + + WNS+I+G K G
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 102 DDASRLFASMPERDQCSWNSMVSG-------------------------------FAQHD 130
+A LF MP R+ +W SMV+G +AQ +
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
EAL F +M E + ++ +S+C+ D + + ++ + + ++ +
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 191 ALIDM--------------------------------YGKCGRVSCARRVFDGMRERNIV 218
AL+DM Y + G++S AR +FD M +R++V
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
SWNS+I Y QNG ++ ++E+F M++ I+PDEVT+ASV+SAC + A K +
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWV-LD 416
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++R + ++ + N+L+ MY+KCG + +A +F M R+VVS +++SG+A
Sbjct: 417 IVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFA------- 469
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
NG +EA+ L ++ E + P H T+ +L AC++
Sbjct: 470 ------------------------ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSH 505
Query: 398 LADLQLGRQ 406
L G+
Sbjct: 506 AGLLNEGKN 514
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 355/657 (54%), Gaps = 71/657 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF ++ +C K++ R +H + K + F+ L+D+Y KC + AR +FDK
Sbjct: 34 PF--VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDK- 90
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
M ERD +W M+ G+A+ + +E+L F
Sbjct: 91 ------------------------------MQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM E + + + + ACA + + + ++ DV +G+A+IDMY KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
V AR +FD M E+N++SW+++I Y +G AL++F M++SG+ PD++TLAS++
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ L + G IH + + L D + ALVDMY KC
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKF-GLDLDHFVCAALVDMYGKC------------------- 280
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
++ AR +F KM ER++V+W +I GY + G E+L LF ++ E
Sbjct: 281 ------------REIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P ++ ACA L + R ++ + + D+ +G ++IDM+ KCG
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL------DVILGTAMIDMHAKCG 382
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
VE IF+ M E++ +SW+AMI +G G +AL LF ML G P+ +T++ +L
Sbjct: 383 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSHAGLVEEG ++FS M +++ + HYTC+VDLLGRAG LDEA LIE+M ++ D
Sbjct: 443 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+WG+ L AC+ H++++L E A LLE++P N G Y+LLSN+YA GRW +V + R LM
Sbjct: 503 GLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLM 562
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+R + K PG +WIE+ + F V D HP +KEIY +LK L +++ VGYVP+ +
Sbjct: 563 SQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 619
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 240/453 (52%), Gaps = 42/453 (9%)
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
MV GFA+ + G F ++ Y+ + AC + +MG +H ++ K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
D ++ +AL+DMY KC + AR +FD M+ER++V+W +I Y + G A+++L +F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M G+ PD+V + +VV ACA L A + I + R +K + D++LG A++DMYAKC
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAMIDMYAKC 179
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G + AR +FDRM +NV+S ++M++ Y GY
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAY-----------------------------GY- 209
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+G+ +AL LFR++ + P T +LL AC++L +LQ+GR H V K GL
Sbjct: 210 -HGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGL----- 263
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+ D FV +L+DMY KC +ED +F+ M ERD V+W MI G A+ G E+L LF
Sbjct: 264 -DLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS-KEHGLAPLKDHYTCMVDLLGR 540
KM G PD V M+ V+ AC+ G + + R + K+ L + T M+D+ +
Sbjct: 323 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAK 380
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
GC++ A+ + + M + + + W +++AA H
Sbjct: 381 CGCVESAREIFDRME-EKNVISWSAMIAAYGYH 412
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 224/457 (49%), Gaps = 81/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ +C + ++ R + I + +F ++ + +ID+YAKCGC+ AR++F
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M KNV SW++M++ + H + +AL
Sbjct: 190 DRMEEKNVI-------------------------------SWSAMIAAYGYHGQGRKALD 218
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S + + S L AC+ + +MG +H ++ K D ++ +AL+DMYG
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 278
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + AR +FD M ER++V+W +I Y + G A+++L +F +M G+ PD+V + +
Sbjct: 279 KCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVT 338
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VV ACA L A + I + R +K + D++LG A++DM+AKCG + AR +FDRM +
Sbjct: 339 VVFACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 397
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NV+S ++M++ Y GY +G+ +AL LF ++
Sbjct: 398 NVISWSAMIAAY-----------------------------GY--HGQGRKALDLFPMML 426
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS------GEESDIFVGNS 431
R + P T +LL AC +H +V+ GLRF S +D+
Sbjct: 427 RSGILPNKITLVSLLYAC-----------SHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 475
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ ++ E+M VE+D W A + C
Sbjct: 476 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 512
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 357/648 (55%), Gaps = 64/648 (9%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
SC +S++ R +H ++KS E ++ + LI++Y KCG + A +F+ + +K+
Sbjct: 220 SCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVR 279
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
N++I WN M+SG+ + FS+AL F+KM
Sbjct: 280 RNAVI--------------------------WNVMISGYVSNGCFSQALLLFIKMMVWGI 313
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ S S C+ S+D G Q+H L+ K +++ + +AL+DMY KCG + +
Sbjct: 314 KPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLK 373
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F + N++ W+++I+ Q+G + ALE+F D L +V+ AC+SL
Sbjct: 374 IFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTL 433
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
EG+QIH L +D+ +G+ALVD+YAKC +
Sbjct: 434 KPEGMQIHG-LATKMGFVSDVFVGSALVDLYAKCRDM----------------------- 469
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
GY+K +F ++ ++++VSWNALI+GY Q+ +EAL FR ++ E + P T
Sbjct: 470 GYSKK--------VFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVT 521
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+L+ CA+L+ + L ++ H ++++ GL S + V NSLI Y KCG +
Sbjct: 522 IACILSVCAHLSVMTLCKEVHGYLIRQGLG------STVLVSNSLIATYAKCGDINSSLY 575
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
FE M ER+ VSWN++I+G + E + LF KM+ G KPDHVT +L ACSHAG
Sbjct: 576 TFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGR 635
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG KYF SM ++ L P + YTCMVDLLGRAG L++A LI AMP PD IWGSLL
Sbjct: 636 VDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLL 695
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
+CK H + +L E VA + ++ PS+ G VLL+N+Y LG+ E +VR ++ G+ K
Sbjct: 696 GSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKK 755
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+PGCSWIE+ + ++F+ D+ H + EIY ++ LT E+KR GY+P
Sbjct: 756 KPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQ 803
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 243/492 (49%), Gaps = 48/492 (9%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS++T K G ++DA ++F MPE D SWN+M+SGF + ++ +L +F M E F
Sbjct: 148 NSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWE-FG 206
Query: 149 L--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
+ + + S++ +C+ G ++H ++ KS + Y+ S+LI+MY KCG + A
Sbjct: 207 IYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAE 266
Query: 207 RVFDGMRE-----RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+F+ + + RN V WN +I+ Y NG S AL +F++MM GI+PD T+ S+ S
Sbjct: 267 NIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSL 326
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ G QIH + + L+N++ + AL+DMY KCG + +F R
Sbjct: 327 CSESLDIAFGKQIHGLIFKF-GLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQ------ 379
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
N++ W+A+I+ Q+G +AL LF K E
Sbjct: 380 -------------------------NHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDG 414
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+L AC++L G Q HGL G SD+FVG++L+D+Y KC
Sbjct: 415 LADSGILVAVLRACSSLTLKPEGMQI------HGLATKMGFVSDVFVGSALVDLYAKCRD 468
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ ++F + ++D VSWNA+I G AQ+ EAL F+ M L +P+ VT+ +L
Sbjct: 469 MGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSV 528
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+H ++ ++ + ++ GL ++ + G ++ + E MP + D V
Sbjct: 529 CAHLSVMTLCKEVHGYLIRQ-GLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERND-V 586
Query: 562 IWGSLLAACKVH 573
W S++ +H
Sbjct: 587 SWNSIILGMGMH 598
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 222/463 (47%), Gaps = 59/463 (12%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS-FGSALSACAGSVDFKMGTQVHALLS 178
N+++ + + F +A+G ++KM + + E+ F + A G D G Q+H +
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K DV + ++L+ MY KCG V A ++F+ M E ++VSWN++I+ ++++ + +L
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196
Query: 239 VFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
F M+ GI P+ V S + +C+SL + G +IH +++ L + L ++L++M
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVK-SGLDVEEYLVSSLIEM 255
Query: 298 YAKCGKLNEARCVFDRM-----PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
Y KCG + A +F+ + RN V M+SGY A L+F KM+
Sbjct: 256 YMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMM-----V 310
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W + P + T +L + C+ D+ G+Q H +
Sbjct: 311 WG--------------------------IKPDYSTMVSLFSLCSESLDIAFGKQIHGLIF 344
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K GL+ ++I V +L+DMY+KCG + G +IF + + W+A+I CAQ+G
Sbjct: 345 KFGLK------NNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGC 398
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP----LK 528
T+AL LF + + D ++ VL ACS L EG + HGLA +
Sbjct: 399 PTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQI-------HGLATKMGFVS 451
Query: 529 DHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
D + + +VDL + + +K + + Q D V W +L++
Sbjct: 452 DVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSWNALISG 493
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 63/380 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S L C S ++ +++H I K + I ++ L+D+Y KCG + K+F
Sbjct: 316 DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ N N+ W+++I+ + G A LF F D +++ G
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYE---------------FKMEDGLADS-G 419
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
V + L AC+ G Q+H L +K + SDV++GSAL+D+Y
Sbjct: 420 ILV---------------AVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYA 464
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + +++VF + ++++VSWN+LI+ Y Q+ A +AL+ F M I P+ VT+A
Sbjct: 465 KCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIAC 524
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S CA L+ ++H L+R + L + +++ N+L+ YAKCG +N + F++MP R
Sbjct: 525 ILSVCAHLSVMTLCKEVHGYLIR-QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPER 583
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N VS WN++I G + +E + LF +
Sbjct: 584 NDVS-------------------------------WNSIILGMGMHSRTDEMIVLFDKMV 612
Query: 378 RESVCPTHYTFGNLLNACAN 397
+ P H TF +L+AC++
Sbjct: 613 ASGIKPDHVTFTAILSACSH 632
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 25/254 (9%)
Query: 337 SARLMFTKMLERNVVSW-NALIAGYTQNGENEEALGLFRLLKRESVCPTHYT-FGNLLNA 394
S++ + TK+ VS+ N +I YT++G ++A+G++ + + V + F L+ A
Sbjct: 59 SSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA 118
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
L D+ GRQ H HV+K G+ D+ V NSL+ MY KCG VED ++FE M E
Sbjct: 119 FGGLCDVYKGRQIHGHVLKLGVL------DDVSVVNSLLTMYWKCGVVEDAVQMFEKMPE 172
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D VSWN MI G ++ T +L F+ M+ G P+ V + + +CS + GR+
Sbjct: 173 VDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGRE 232
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM----PMQPDAVIWGSLLAA 569
+ K GL + + ++++ + G + A+ + ++ ++ +AVIW
Sbjct: 233 IHGVVVKS-GLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIW------ 285
Query: 570 CKVHRNIMLGEYVA 583
N+M+ YV+
Sbjct: 286 -----NVMISGYVS 294
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
++ A +L C ++ + VH +I+ S + + N LI YAKCG + + F
Sbjct: 518 NTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTF 577
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLF----ASMPERDQCSWNSMVSGFAQHDRFS 133
+KM +N +WNSII G+ D+ LF AS + D ++ +++S + R
Sbjct: 578 EKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVD 637
Query: 134 EALGYFVKMHSENFAL 149
E YF M E+F L
Sbjct: 638 EGCKYFKSM-VEDFNL 652
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/673 (35%), Positives = 371/673 (55%), Gaps = 71/673 (10%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+P + +L C K+ D ++VHA ++K++ RL+D L A
Sbjct: 22 NPKSLILQQC---KTPKDLQQVHAHLLKTR---------RLLDPIITEAVLESA------ 63
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
LL ID A +F + + + ++N M+ G A AL F
Sbjct: 64 --------------ALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLF 109
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
KMH ++ +++F S L AC+ + G QVHAL+ KS + S+ ++ + LI MY C
Sbjct: 110 KKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANC 169
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G++ AR VFDGM ER+IV+WNS+++ Y +NG + +++F +++ IE D+VT+ SV+
Sbjct: 170 GQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVL 229
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC LA + G ++ + + LR + L +L+DM
Sbjct: 230 MACGRLANLEIG-ELIGEYIVSKGLRRNNTLTTSLIDM---------------------- 266
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
YAK V +AR +F +M +R+VV+W+A+I+GY Q +EAL LF +++
Sbjct: 267 ---------YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKG 317
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+V P T ++L +CA L + G+ H ++ K ++ + +G LID Y KC
Sbjct: 318 NVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKL------TVTLGTQLIDFYAKC 371
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ +F+ M ++ +W A+I G A NG G AL F ML KP+ VT IGVL
Sbjct: 372 GYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVL 431
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSHA LV++GR F+SM ++ + P +HY CMVD+LGRAG L+EA I+ MP P+
Sbjct: 432 SACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPN 491
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
AV+W +LLA+C+ H+NI + E + + +EP++SG Y+LLSN YA +GR + +RVR L
Sbjct: 492 AVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSL 551
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
++++ + K PGCS IE+ G V+ F +D H +KEI+ L + +++KR+GYVPN +DD
Sbjct: 552 IKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPN-TDD 610
Query: 680 EAYEEQNGSNSTS 692
E + S TS
Sbjct: 611 ARLEAEEESKETS 623
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 211/451 (46%), Gaps = 69/451 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ +L +C R K++ + +VHA I+KS F S F++N LI +YA CG + AR V
Sbjct: 120 DKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHV- 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F MPER +WNSM+SG+ ++ + E +
Sbjct: 179 ------------------------------FDGMPERSIVAWNSMLSGYTKNGLWDEVVK 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F K+ + + S L AC + ++G + + + + ++LIDMY
Sbjct: 209 LFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V AR++FD M +R++V+W+++I+ Y Q +AL +F M + P+EVT+ S
Sbjct: 269 KCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ +CA L A++ G +H + + +K++ + LG L+D YAKCG ++ + VF M +
Sbjct: 329 VLYSCAMLGAYETGKWVHFYIKK-KKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NV + T+++ G A NGE + AL F +
Sbjct: 388 NVFTWTALIQGLA-------------------------------NNGEGKMALEFFSSML 416
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P TF +L+AC++ + GR + + +R E I ++D+
Sbjct: 417 ENDVKPNDVTFIGVLSACSHACLVDQGRH-----LFNSMRRDFDIEPRIEHYGCMVDILG 471
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G +E+ + + M + V W ++ C
Sbjct: 472 RAGFLEEAYQFIDNMPFPPNAVVWRTLLASC 502
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 340/609 (55%), Gaps = 69/609 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M+ G A AL +V+M S + YSF L +CA
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----------------VSC--- 204
S F+ G Q+HA + K D Y+ ++LI MY + G VSC
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 205 ------------ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
AR+VFD + ER++VSWN++IT Y +NG +ALE+F MM + + PDE
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRC---EKLRNDLVLGNALVDMYAKCGKLNEARC 309
TL SVVSACA + + G Q+H+ + + L + NAL+D+Y+KCG
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG------- 249
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
V++A +F + ++VVSWN LI GYT +EA
Sbjct: 250 ------------------------DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEA 285
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF+ + R CP T ++L ACA+L + +GR H ++ K L G ++ +
Sbjct: 286 LLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKK----LKGVTNETSLR 341
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
SLIDMY KCG +E ++F +M+ R SWNAMI G A +G A LF +M +
Sbjct: 342 TSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVE 401
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PD +T +G+L ACSH+GL++ GR+ F SM++++ L P +HY CM+DLLG +G EA+
Sbjct: 402 PDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEE 461
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
+I MPM+PD VIW SLL ACK H N+ L E A+KL++IEP NSG YVLLSN+YA GR
Sbjct: 462 MIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGR 521
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W +V RVR ++ +G+ K PGCS IE+ V+ F++ DK HP +EIY +L+ + +++
Sbjct: 522 WEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEE 581
Query: 670 VGYVPNASD 678
G+ P+ S+
Sbjct: 582 AGFAPDTSE 590
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 235/460 (51%), Gaps = 42/460 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +SK+ + R++HA+++K + ++ LI +YA+ G L ARKVF
Sbjct: 63 NSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVF 122
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S+++V + ++ITG G A ++F + ERD SWN+M++G+ ++ R+ EAL
Sbjct: 123 DASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALE 182
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR----YSSDVYMGSALI 193
F +M N E + S +SACA S ++G QVH+ + +SS + + +ALI
Sbjct: 183 LFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALI 242
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D+Y KCG V A +F+G+ +++VSWN+LI Y +AL +F M+ SG P++V
Sbjct: 243 DLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDV 302
Query: 254 TLASVVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
TL SV+ ACA L A G IH + + + + N+ L +L+DMYAKCG + A VF+
Sbjct: 303 TLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFN 362
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R++ S +M+ G+A +G A L
Sbjct: 363 SMLYRSLSSWNAMIFGFA-------------------------------MHGRANAAFDL 391
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F ++ V P TF LL+AC++ L LGRQ + + E +
Sbjct: 392 FSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHY-----GCM 446
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
ID+ G ++ + TM +E D V W +++ C ++G
Sbjct: 447 IDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHG 486
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/661 (36%), Positives = 365/661 (55%), Gaps = 44/661 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF L C +S+ + ++H IIK +A ++F+QN L+ YA+CG L ARKVFD+M
Sbjct: 137 PFG--LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEM 194
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +NV +W S+I G + F DA LF F
Sbjct: 195 SERNVVSWTSMICGYARREFAKDAVDLF------------------------------FR 224
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ E+ + + +SACA D + G +V+ + S + M SAL+DMY KC
Sbjct: 225 MVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCN 284
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+R+FD N+ N++ + Y + G +AL V MM SGI PD +++ S +S
Sbjct: 285 AIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAIS 344
Query: 261 ACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+C+ L G H ++R E N + NAL+DMY KC + + A +FDRM +
Sbjct: 345 SCSQLRNILWGKSCHGYVLRNGFESWDN---ICNALIDMYMKCHRQDTAFRIFDRMSNKT 401
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK- 377
VV+ S+V+GY + V +A F M E+N+VSWN +I+ Q EEA+ +F ++
Sbjct: 402 VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQS 461
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E V T ++ +AC +L L L + + ++ K+ ++ D+ +G +L+DM+
Sbjct: 462 QECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQL------DVRLGTTLVDMFS 515
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG E IF ++ RD +W A I A G A+ LF +M+ G KPD V IG
Sbjct: 516 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIG 575
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L AC H GLV++G++ F+SM K HG++P HY CMVDLLGRAG L+EA LI+ MP +
Sbjct: 576 ALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTE 635
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ VIW SLLAAC+V N+ + + A+K+ + P +G YVLLSN+YA GRW ++ +VR
Sbjct: 636 PNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 695
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++G+ K PG S I+I G + F D+ HP ++I +L L++ +G+VP+ S
Sbjct: 696 LSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLS 755
Query: 678 D 678
+
Sbjct: 756 N 756
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 225/453 (49%), Gaps = 46/453 (10%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS++ G+A EA+ F++M + + +Y+F LS CA S D G Q+H L+
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K Y+ D+++ ++L+ Y +CG + CAR+VFD M ERN+VSW S+I Y + A DA++
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 239 VFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F RM+ + P+ VT+ V+SACA L + G +++ + NDL++ +ALVDM
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI-SALVDM 279
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KC ++ A+ +FD Y + N+ NA+
Sbjct: 280 YMKCNAIDIAKRLFDE---------------YGAS----------------NLDLCNAMA 308
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+ Y + G +EALG+ L+ + P + + +++C+ L ++ G+ H +V+++G
Sbjct: 309 SNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF- 367
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
ES + N+LIDMYMKC + RIF+ M + V+WN+++ G +NG A
Sbjct: 368 -----ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAW 422
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
F M + + V+ ++ A + EE + F M + + +
Sbjct: 423 ETFNTM----PEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASA 478
Query: 538 LGRAGCLDEAKTL---IEAMPMQPDAVIWGSLL 567
G G LD AK + IE +Q D + +L+
Sbjct: 479 CGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLV 511
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/658 (35%), Positives = 366/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ SC R++HA ++KS+F +++ QN LI +Y K F
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTK----------F 247
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M+ DA +F+ + +D SW SM++GF+Q EAL
Sbjct: 248 SQMA---------------------DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 138 YFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F +M S++ + +E+ FGSA SAC+ ++ G Q+H L K SD++ G +L DMY
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMY 346
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + AR VF + + ++V+WN++I + A ++ F +M +G+ P++VT+
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC+ G+Q+H+ +++ D+ + N+L+ MY+KC LN+A VF+ I
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNLNDALQVFED--I 463
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N + ++VSWN L+ Q + E L L +L+
Sbjct: 464 GN----------------------------KADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P H T N+L + +A ++G Q H ++K GL DI V N+LI+MY
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL------DISVSNALINMY 549
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+E ++F+++ D +SW+++IVG AQ G G EA LF+ M G KP+ +T +
Sbjct: 550 TKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFV 609
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L ACSH G+VEEG K + +M +++ ++P K+H +CMVDLL RAGCLD A+ I+ MP
Sbjct: 610 GILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPF 669
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
PD V+W +LLAACKVH N+ +G+ A+ +L+I+PSNS V+L N++A G W + R+
Sbjct: 670 VPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARL 729
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R MR+ V K PG SWIEI V+VF+ +D HP +IY +L+ L ++ G P
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDP 787
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 264/553 (47%), Gaps = 73/553 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S + L+++C +S+ R++H ++ + ++ +QN ++ +Y KCG L AR +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD SMP ++ SW SM+SG++++ A+
Sbjct: 156 FD-------------------------------SMPLKNVVSWTSMISGYSRYGEEDNAI 184
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V+M ++FGS + +C+G DFK+ Q+HA + KS + +D+ +ALI MY
Sbjct: 185 TLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY 244
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTL 255
K +++ A VF + ++++SW S+I + Q G +AL F M++ + +P+E
Sbjct: 245 TKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVF 304
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S SAC+ L G QIH ++ L +DL G +L DMYAKCG L AR VF +
Sbjct: 305 GSAFSACSKLLEPDCGRQIHGLCIKF-GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++V+ ++++G+A S+ K + F++M +V
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLV------------------------ 399
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
P T +LL AC+ L G Q H+++VK G DI V NSL+ M
Sbjct: 400 -------PNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL------DIPVCNSLLSM 446
Query: 436 YMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KC ++ D ++FE + + D VSWN ++ C Q E L L K M KPDHVT
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ VL + E G + + K GL ++++ + G L+ A+ + +++
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 555 PMQPDAVIWGSLL 567
PD + W SL+
Sbjct: 566 G-NPDIISWSSLI 577
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 222/445 (49%), Gaps = 46/445 (10%)
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
H +A F K S L ++ ++AC+ + G ++H + Y D+ +
Sbjct: 78 HREALKAFDIFQKCSSS--PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMIL 135
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+ ++ MYGKCG + AR +FD M +N+VSW S+I+ Y + G +A+ ++V+M+ SG
Sbjct: 136 QNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGH 195
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T S+V +C+ L FK Q+HA +++ E DL+ NAL+ MY K ++ +A
Sbjct: 196 IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE-FGADLIAQNALISMYTKFSQMADAI 254
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF R+ I++++S SM++G ++Q G E
Sbjct: 255 NVFSRIIIKDLISWGSMIAG-------------------------------FSQLGYELE 283
Query: 369 ALGLFRLLKRESVC-PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
AL FR + +SV P + FG+ +AC+ L + GRQ H +K GL SD+F
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL------GSDLF 337
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
G SL DMY KCG +E +F + + D V+WNA+I G A E+ F +M G
Sbjct: 338 AGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTG 397
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLD 545
P+ VT++ +LCACS ++ G + S + K + D C ++ + + L+
Sbjct: 398 LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK---MGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAAC 570
+A + E + + D V W +LL AC
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTAC 479
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 343/576 (59%), Gaps = 42/576 (7%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F MPER+ +W M++ FAQ +A+ F+ M + +++ S LSAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC---GRVSCARRVFDGMRERNIVSW 220
+G Q+H+ + + + DV +G +L+DMY KC G V +R+VF+ M E N++SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 221 NSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
++IT Y Q+G +A+E+F +M++ I P+ + +SV+ AC +L+ G Q+++ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ + V GN+L+ MYA+ G++ + AR
Sbjct: 189 KLGIASVNCV-GNSLISMYARSGRM-------------------------------EDAR 216
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F + E+N+VS+NA++ GY +N ++EEA LF + + + +TF +LL+ A++
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ G Q H ++K G + S+ + N+LI MY +CG++E ++F M +R+ +S
Sbjct: 277 AMGKGEQIHGRLLKGGYK------SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 330
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W +MI G A++G+ T AL +F KML G KP+ +T + VL ACSH G++ EG+K+F+SM
Sbjct: 331 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 390
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
KEHG+ P +HY CMVDLLGR+G L EA I +MP+ DA++W +LL AC+VH N LG
Sbjct: 391 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 450
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
+ A+ +LE EP + Y+LLSN++A G+W +VV++RK M++R ++K+ GCSWIE+
Sbjct: 451 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 510
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
V+ F V + HP +IY L L ++K +GY+P+
Sbjct: 511 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 546
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 224/481 (46%), Gaps = 78/481 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D ++ +L +C ++ +++H+R+I+ A ++ + L+D+YAKC G + +R
Sbjct: 55 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 114
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
KVF++M NV +W +IIT + G D E
Sbjct: 115 KVFEQMPEHNVMSWTAIITAYAQSGECD------------------------------KE 144
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ F KM S + + +SF S L AC D G QV++ K +S +G++LI
Sbjct: 145 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 204
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + GR+ AR+ FD + E+N+VS+N+++ Y +N + +A +F + +GI T
Sbjct: 205 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 264
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++S AS+ A +G QIH RL++ N + NAL+ MY++CG + A VF+ M
Sbjct: 265 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC-NALISMYSRCGNIEAAFQVFNEM 323
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEAL 370
RNV+S TSM++G+AK A MF KMLE N +++ A+++ + G E
Sbjct: 324 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 383
Query: 371 GLFR-LLKRESVCP--THY------------------------------TFGNLLNACAN 397
F + K + P HY + LL AC
Sbjct: 384 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRV 443
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
+ +LGR A + L E D L +++ G +D +I ++M ER+
Sbjct: 444 HGNTELGRHAAEMI-------LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 496
Query: 458 V 458
+
Sbjct: 497 I 497
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 345/582 (59%), Gaps = 42/582 (7%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A ++F MPER+ +W M++ FAQ +A+ F+ M + +++ S L
Sbjct: 179 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 238
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC---GRVSCARRVFDGMRER 215
SAC +G Q+H+ + + + DV +G +L+DMY KC G V +R+VF+ M E
Sbjct: 239 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 298
Query: 216 NIVSWNSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
N++SW ++IT Y Q+G +A+E+F +M++ I P+ + +SV+ AC +L+ G Q+
Sbjct: 299 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 358
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
++ ++ + V GN+L+ MYA+ G++
Sbjct: 359 YSYAVKLGIASVNCV-GNSLISMYARSGRM------------------------------ 387
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
+ AR F + E+N+VS+NA++ GY +N ++EEA LF + + + +TF +LL+
Sbjct: 388 -EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
A++ + G Q H ++K G + S+ + N+LI MY +CG++E ++F M +
Sbjct: 447 AASIGAMGKGEQIHGRLLKGGYK------SNQCICNALISMYSRCGNIEAAFQVFNEMED 500
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
R+ +SW +MI G A++G+ T AL +F KML G KP+ +T + VL ACSH G++ EG+K+
Sbjct: 501 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH 560
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F+SM KEHG+ P +HY CMVDLLGR+G L EA I +MP+ DA++W +LL AC+VH
Sbjct: 561 FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 620
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N LG + A+ +LE EP + Y+LLSN++A G+W +VV++RK M++R ++K+ GCSWI
Sbjct: 621 NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 680
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
E+ V+ F V + HP +IY L L ++K +GY+P+
Sbjct: 681 EVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 722
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/619 (28%), Positives = 303/619 (48%), Gaps = 78/619 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ LL SC+R ++ + VH ++++S + + N LI +Y+KCG AR +F
Sbjct: 25 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 84
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M NK RD SW++MVS FA + +A+
Sbjct: 85 EGMGNK------------------------------RDLVSWSAMVSCFANNSMEWQAIW 114
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMY 196
F+ M F +EY F + + AC+ + +G ++ + K+ Y +DV +G LIDM+
Sbjct: 115 TFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 174
Query: 197 GK-CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K G + A +VFD M ERN+V+W +IT + Q G A DA+++F+ M SG PD T
Sbjct: 175 VKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 234
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC---GKLNEARCVFD 312
+SV+SAC L G Q+H+R++R L D+ +G +LVDMYAKC G ++++R VF+
Sbjct: 235 SSVLSACTELGLLALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 293
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALG 371
+MP NV+S T++++ Y Q+GE ++EA+
Sbjct: 294 QMPEHNVMSWTAIIT-------------------------------AYVQSGECDKEAIE 322
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF + + P H++F ++L AC NL+D G Q +++ VK G+ ++ VGNS
Sbjct: 323 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC------VGNS 376
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
LI MY + G +ED + F+ + E++ VS+NA++ G A+N EA LF ++ G
Sbjct: 377 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
T +L + G + +G + + K G + ++ + R G ++ A +
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVF 495
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI-EPSNSGPYVLLSNMYAELGRW 610
M + + W S++ H + K+LE N YV + + + +G
Sbjct: 496 NEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 554
Query: 611 GEVVR-VRKLMRKRGVVKQ 628
E + + ++ G+V +
Sbjct: 555 SEGQKHFNSMYKEHGIVPR 573
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 213/430 (49%), Gaps = 44/430 (10%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R A M +N ++ L +C +F++G VH L +S D + +
Sbjct: 6 RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 65
Query: 191 ALIDMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
LI +Y KCG AR +F+GM +R++VSW+++++C+ N A+ F+ M+ G
Sbjct: 66 TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK-CGKLNEAR 308
P+E A+V+ AC++ G I+ +++ L D+ +G L+DM+ K G L A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VFD+MP RN+V+ T M++ +A+ + A +F M ++GY
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM----------ELSGYV------- 228
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
P +T+ ++L+AC L L LG+Q H+ V++ GL D+ V
Sbjct: 229 --------------PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL------DVCV 268
Query: 429 GNSLIDMYMKC---GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY-GTEALGLFKKML 484
G SL+DMY KC GSV+D ++FE M E + +SW A+I Q+G EA+ LF KM+
Sbjct: 269 GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI 328
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
+P+H + VL AC + G + +S K G+A + ++ + R+G +
Sbjct: 329 SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL-GIASVNCVGNSLISMYARSGRM 387
Query: 545 DEAKTLIEAM 554
++A+ + +
Sbjct: 388 EDARKAFDIL 397
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 130/228 (57%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+I+ + G ++DA + F + E++ S+N++V G+A++ + EA F ++
Sbjct: 375 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 434
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+S ++F S LS A G Q+H L K Y S+ + +ALI MY +CG + A +V
Sbjct: 435 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 494
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M +RN++SW S+IT + ++G A+ ALE+F +M+ +G +P+E+T +V+SAC+ +
Sbjct: 495 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 554
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
EG + + + + + +VD+ + G L EA + MP+
Sbjct: 555 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 602
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/721 (33%), Positives = 372/721 (51%), Gaps = 109/721 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFA------------------------------ 51
+ +L C KS+ D +RVH+ II + +
Sbjct: 372 YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIM 431
Query: 52 -SEIFIQNRLIDVYAKCGCLYGARKVFDKMSN----KNVFTW------------------ 88
++F+ N L+ YAK G + +F KM N +T+
Sbjct: 432 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Query: 89 -----------------NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
NS+I K+G ++ A LF + E D SWNSM++G +
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
L F++M + + S L A A + +G +H K+ +S +V +
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+DMY KCG ++ A VF M + IVSW S I Y + G SDA+ +F M + G+ PD
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T+ S+V ACA ++ +G +H+ +++ + ++L + NAL++MYAKCG
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCG--------- 721
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
SV+ ARL+F+K+ +++VSWN +I GY+QN EAL
Sbjct: 722 ----------------------SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALE 759
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF ++++ P T +L ACA LA L GR+ H H+++ G SD+ V +
Sbjct: 760 LFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF------SDLHVACA 812
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KCG + +F+ + ++D +SW MI G +G+G EA+ F +M + G +PD
Sbjct: 813 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPD 872
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ +L ACSH+GL+ EG K+F+SM E G+ P +HY C+VDLL R G L +A I
Sbjct: 873 ESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFI 932
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
E+MP++PD IWG LL+ C++H ++ L E VA+ + E+EP N+ YV+L+N+YAE +W
Sbjct: 933 ESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWE 992
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
EV ++RK M+KRG + PGCSWIE+ G N+F+ + +HP K I ++L+ LT +M+
Sbjct: 993 EVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNED 1052
Query: 672 Y 672
Y
Sbjct: 1053 Y 1053
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 42/450 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+ ++ F + A+ K S+++ L S+ S L CA + G +VH+++
Sbjct: 340 NAKINKFCEMGDLRNAIELLTK--SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ S D +G+ L+ MY CG + R++FD + + WN L++ Y + G +++ +
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F +M G+ + T V+ A+L KE ++H +++ N V+ N+L+ Y
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV-NSLIAAYF 516
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
K G + A +FD + +VV SWN++I G
Sbjct: 517 KFGGVESAHNLFDELSEPDVV-------------------------------SWNSMING 545
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
NG + L +F + V T ++L A AN+ +L LGR H VK
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACF--- 602
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
++ N+L+DMY KCG++ +F M + VSW + I + G ++A+GL
Sbjct: 603 ---SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGL 659
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F +M G +PD T+ ++ AC+ + +++GR S + K +G+ ++++
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYA 718
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ G ++EA+ + +P++ D V W +++
Sbjct: 719 KCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 345/582 (59%), Gaps = 42/582 (7%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A ++F MPER+ +W M++ FAQ +A+ F+ M + +++ S L
Sbjct: 197 GDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVL 256
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC---GRVSCARRVFDGMRER 215
SAC +G Q+H+ + + + DV +G +L+DMY KC G V +R+VF+ M E
Sbjct: 257 SACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH 316
Query: 216 NIVSWNSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
N++SW ++IT Y Q+G +A+E+F +M++ I P+ + +SV+ AC +L+ G Q+
Sbjct: 317 NVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQV 376
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
++ ++ + V GN+L+ MYA+ G++
Sbjct: 377 YSYAVKLGIASVNCV-GNSLISMYARSGRM------------------------------ 405
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
+ AR F + E+N+VS+NA++ GY +N ++EEA LF + + + +TF +LL+
Sbjct: 406 -EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 464
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
A++ + G Q H ++K G + S+ + N+LI MY +CG++E ++F M +
Sbjct: 465 AASIGAMGKGEQIHGRLLKGGYK------SNQCICNALISMYSRCGNIEAAFQVFNEMED 518
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
R+ +SW +MI G A++G+ T AL +F KML G KP+ +T + VL ACSH G++ EG+K+
Sbjct: 519 RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH 578
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F+SM KEHG+ P +HY CMVDLLGR+G L EA I +MP+ DA++W +LL AC+VH
Sbjct: 579 FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 638
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N LG + A+ +LE EP + Y+LLSN++A G+W +VV++RK M++R ++K+ GCSWI
Sbjct: 639 NTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 698
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
E+ V+ F V + HP +IY L L ++K +GY+P+
Sbjct: 699 EVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDT 740
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 281/562 (50%), Gaps = 76/562 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ LL SC+R ++ + VH ++++S + + N LI +Y+KCG AR +F
Sbjct: 43 DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIF 102
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M NK RD SW++MVS FA + +A+
Sbjct: 103 EGMGNK------------------------------RDLVSWSAMVSCFANNSMEWQAIW 132
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMY 196
F+ M F +EY F + + AC+ + +G ++ + K+ Y +DV +G LIDM+
Sbjct: 133 TFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 192
Query: 197 GK-CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K G + A +VFD M ERN+V+W +IT + Q G A DA+++F+ M SG PD T
Sbjct: 193 VKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 252
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC---GKLNEARCVFD 312
+SV+SAC L G Q+H+R++R L D+ +G +LVDMYAKC G ++++R VF+
Sbjct: 253 SSVLSACTELGLLALGKQLHSRVIRL-GLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 311
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALG 371
+MP NV+S T++++ Y Q+GE ++EA+
Sbjct: 312 QMPEHNVMSWTAIIT-------------------------------AYVQSGECDKEAIE 340
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF + + P H++F ++L AC NL+D G Q +++ VK G+ ++ VGNS
Sbjct: 341 LFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC------VGNS 394
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
LI MY + G +ED + F+ + E++ VS+NA++ G A+N EA LF ++ G
Sbjct: 395 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
T +L + G + +G + + K G + ++ + R G ++ A +
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAFQVF 513
Query: 552 EAMPMQPDAVIWGSLLAACKVH 573
M + + W S++ H
Sbjct: 514 NEME-DRNVISWTSMITGFAKH 534
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 213/430 (49%), Gaps = 44/430 (10%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R A M +N ++ L +C +F++G VH L +S D + +
Sbjct: 24 RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 83
Query: 191 ALIDMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
LI +Y KCG AR +F+GM +R++VSW+++++C+ N A+ F+ M+ G
Sbjct: 84 TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 143
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK-CGKLNEAR 308
P+E A+V+ AC++ G I+ +++ L D+ +G L+DM+ K G L A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 203
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VFD+MP RN+V+ T M++ +A+ + A +F M ++GY
Sbjct: 204 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM----------ELSGYV------- 246
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
P +T+ ++L+AC L L LG+Q H+ V++ GL D+ V
Sbjct: 247 --------------PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLAL------DVCV 286
Query: 429 GNSLIDMYMKC---GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY-GTEALGLFKKML 484
G SL+DMY KC GSV+D ++FE M E + +SW A+I Q+G EA+ LF KM+
Sbjct: 287 GCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI 346
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
+P+H + VL AC + G + +S K G+A + ++ + R+G +
Sbjct: 347 SGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL-GIASVNCVGNSLISMYARSGRM 405
Query: 545 DEAKTLIEAM 554
++A+ + +
Sbjct: 406 EDARKAFDIL 415
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 130/228 (57%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+I+ + G ++DA + F + E++ S+N++V G+A++ + EA F ++
Sbjct: 393 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 452
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+S ++F S LS A G Q+H L K Y S+ + +ALI MY +CG + A +V
Sbjct: 453 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 512
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M +RN++SW S+IT + ++G A+ ALE+F +M+ +G +P+E+T +V+SAC+ +
Sbjct: 513 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMI 572
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
EG + + + + + +VD+ + G L EA + MP+
Sbjct: 573 SEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 620
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL ++ ++H R++K + S I N LI +Y++CG + A +VF++M
Sbjct: 458 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 517
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALG 137
++NV +W S+ITG K GF A +F M E ++ ++ +++S + SE
Sbjct: 518 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 577
Query: 138 YFVKMHSEN 146
+F M+ E+
Sbjct: 578 HFNSMYKEH 586
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/755 (31%), Positives = 383/755 (50%), Gaps = 136/755 (18%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
++ A LL +C+ K+ + +HA +++S+ + + F+ NRLI+ YAKC + +R++FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 79 KMSNKNVFT-------------------------------WNSIITGLLKWGF------- 100
+M ++++T WN++I+ L + G
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDV 124
Query: 101 ----------------------------------IDDASRLFASMPERDQCSWNSMVSGF 126
I DA + F +PE ++ S+ +M+ G
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKM------------GTQ 172
A D+ +EA F M + S S L C+ G +F + G Q
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 244
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
VH L K + SD+++ ++L+DMY K G + A +F M E ++VSWN +I Y Q
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+S A+E RM G EPDE+T +++ AC + G Q+ + L N
Sbjct: 305 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS-----PSLSSWN 359
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNV----------------------------VSE-- 322
++ Y++ EA +F M R+V VS+
Sbjct: 360 TILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKA 419
Query: 323 ---------TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ ++ Y+K V+ A+ +F ++ E ++V WN+++AG + N ++EA F
Sbjct: 420 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFF 479
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ ++ + + P+ +++ +L+ CA L+ L GRQ H+ + + G +D FVG++LI
Sbjct: 480 KKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYM------NDAFVGSALI 533
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG V+ +F+ M+ ++ V+WN MI G AQNG G EA+ L++ M+ GEKPD +
Sbjct: 534 DMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGI 593
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T + VL ACSH+GLV+ G K F+SM +EHG+ PL DHYTC++D LGRAG L EA+ LI+
Sbjct: 594 TFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDK 653
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP + D +IW LL++C+V+ ++ L A++L ++P NS PYVLL+N+Y+ LGRW +
Sbjct: 654 MPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA 713
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
VR+LM VVK PG SWIE + FMV D
Sbjct: 714 KAVRELMSYNQVVKDPGYSWIEHKNGMQAFMVDDN 748
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 35/368 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L S + R+VHA K+ F ++I++ + LI +Y+KCG + A+++F
Sbjct: 389 DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIF 448
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+++ ++ WNS++ GL S NS+ D+ EA
Sbjct: 449 DRIAELDIVCWNSMMAGL----------------------SLNSL-------DK--EAFT 477
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F KM + S++S+ + LS CA G QVH+ +++ Y +D ++GSALIDMY
Sbjct: 478 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 537
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V AR VFD M +N V+WN +I Y QNG +A+ ++ M+ SG +PD +T +
Sbjct: 538 KCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVA 597
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC+ G++I + + + + ++D + G+L+EA + D+MP +
Sbjct: 598 VLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 657
Query: 318 --NVVSETSMVSG--YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
++ E + S YA S + A + +N + L Y+ G ++A +
Sbjct: 658 YDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVR 717
Query: 374 RLLKRESV 381
L+ V
Sbjct: 718 ELMSYNQV 725
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 162/335 (48%), Gaps = 50/335 (14%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+E LAS++ C A G IHA ++R +L +D L N L++ YAKC ++ +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLR-SRLSDDTFLSNRLIEFYAKCNAIDAS 59
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +FD+MP R++ + +++ Y KAS ++ A ++F +M ERN+VSWN LI+ T+NG
Sbjct: 60 RRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG--- 116
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
AC L D++ GR+ H +K GL +++I+
Sbjct: 117 --------------------------ACGALVDVECGRRCHGISIKIGL------DNNIY 144
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VGN+L+ MY KC + D + F + E + VS+ AM+ G A + EA LF+ ML
Sbjct: 145 VGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNR 204
Query: 488 EKPDHVTMIGVLCACSHAGLVEEG----RKYFSS---------MSKEHGLAPLKDHYTCM 534
D V++ VL CS G E G SS ++ +HG +
Sbjct: 205 IHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSL 264
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D+ + G +D A+ + MP + V W ++A
Sbjct: 265 LDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG 298
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 372/680 (54%), Gaps = 83/680 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A L+DS + +++HAR++ F+ +LI + G + AR+VFD
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +F WN+++ G+++++ F +AL +
Sbjct: 79 LPRPQIFP-------------------------------WNAIIRGYSRNNHFQDALLMY 107
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++F L AC+G +MG VHA + + + +DV++ + LI +Y KC
Sbjct: 108 SNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC 167
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
R+ AR VF+G+ ER IVSW ++++ Y QNG +ALE+F +M ++PD V L S
Sbjct: 168 RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V++A L K+G IHA +++ ++ DL++ +L MYAKCG+
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQ------------- 272
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
V +A+++F KM N++ WNA+I+GY +NG EA+ +F +
Sbjct: 273 ------------------VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P + + ++ACA + L+ R + +V + R D+F+ ++LIDM+
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR------DDVFISSALIDMF 368
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGSVE +F+ ++RD V W+AMIVG +G EA+ L++ M G P+ VT +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L AC+H+G+V EG +F+ M+ +H + P + HY C++DLLGRAG LD+A +I+ MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QP +WG+LL+ACK HR++ LGEY A++L I+PSN+G YV LSN+YA W V V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+++G+ K GCSW+E+ G + F V DK HP +EI ++ + +K G+V N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 677 S------DDEAYEEQNGSNS 690
+DE EE S+S
Sbjct: 608 DASLHDLNDEEAEETLCSHS 627
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 215/454 (47%), Gaps = 68/454 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL +C + R VHA++ + F +++F+QN LI +YAKC L AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +PER SW ++VS +AQ+ EAL
Sbjct: 178 EGLP-----------------------------LPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S L+A D K G +HA + K + + +L MY
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V+ A+ +FD M+ N++ WN++I+ Y +NG A +A+++F M+ + PD +++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + + ++ ++ + R + R+D+ + +AL+DM+AKCG + AR VFDR R
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV W+A+I GY +G EA+ L+R ++
Sbjct: 388 DVV-------------------------------VWSAMIVGYGLHGRAREAISLYRAME 416
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R V P TF LL AC + ++ G + H + + +ID+
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYA------CVIDLLG 470
Query: 438 KCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQN 470
+ G ++ + + M + V+ W A++ C ++
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 57/437 (13%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+HS++F + S + + K Q+HA L ++ + LI G
Sbjct: 18 IHSDSF------YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR+VFD + I WN++I Y +N DAL ++ M + + PD T ++ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI--RNV 319
C+ L+ + G +HA++ R D+ + N L+ +YAKC +L AR VF+ +P+ R +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS T++VS YA QNGE EAL +F +++
Sbjct: 188 VSWTAIVSAYA-------------------------------QNGEPMEALEIFSQMRKM 216
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P ++LNA L DL+ GR H VVK GL E D+ + SL MY KC
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI----EPDLLI--SLNTMYAKC 270
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G V +F+ M + + WNAMI G A+NGY EA+ +F +M+ +PD +++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPM 556
AC+ G +E+ R SM + G + +D + ++D+ + G ++ A+ L+ +
Sbjct: 331 SACAQVGSLEQAR----SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR-LVFDRTL 385
Query: 557 QPDAVIWGSLLAACKVH 573
D V+W +++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/663 (36%), Positives = 365/663 (55%), Gaps = 42/663 (6%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LLD C S+ + VHA+II A+++ +L+ + + G L A +FD++ N
Sbjct: 45 LLDQC---SSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPN 101
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
F +N +I G++ + ++L F +M S
Sbjct: 102 KFMYNHLI-------------------------------RGYSNSNDPMKSLLLFRQMVS 130
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
++++F L ACA + VHA K + +A++ Y C +
Sbjct: 131 AGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILS 190
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR+VFD + +R IVSWNS+I Y + G +A+ +F M+ G+E D TL S++SA +
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSK 250
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
G +H ++ + D ++ NAL+DMYAKCG L A+ VFD+M ++VVS TS
Sbjct: 251 HCNLDLGRFVHLYIV-ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTS 309
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
MV+ YA V++A +F M +NVVSWN++I Q G+ EA+ LF + V P
Sbjct: 310 MVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPD 369
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++L+ C+N DL LG+QAH ++ + + + + NSLIDMY KCG+++
Sbjct: 370 DATLVSILSCCSNTGDLALGKQAHCYICDNIITV------SVTLCNSLIDMYAKCGALQT 423
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
IF M E++ VSWN +I A +G+G EA+ +FK M G PD +T G+L ACSH
Sbjct: 424 AIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSH 483
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+GLV+ GR YF M ++P +HY CMVDLLGR G L EA TLI+ MP++PD V+WG
Sbjct: 484 SGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWG 543
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL AC+++ N+ + + + K+LLE+ NSG YVLLSNMY+E RW ++ ++RK+M G
Sbjct: 544 ALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSG 603
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-DEAYE 683
+ K S+IEI G FMV DKRH + IY +L L +K VGY +S+ +E Y
Sbjct: 604 IKKCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGYPCKSSEVEEIYY 663
Query: 684 EQN 686
N
Sbjct: 664 SSN 666
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 223/513 (43%), Gaps = 102/513 (19%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q+V + F +L +C + VHA+ IK +QN ++ Y C
Sbjct: 126 RQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVAC 185
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ AR+VFD +S++ + +WNS+I G K GF D+A LF M +
Sbjct: 186 RLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQ-------------- 231
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + ++ F L S LSA + + +G VH + + D
Sbjct: 232 ------------LGVEADVFTLV-----SLLSASSKHCNLDLGRFVHLYIVITGVEIDSI 274
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRE-------------------------------RN 216
+ +ALIDMY KCG + A+ VFD M + +N
Sbjct: 275 VTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKN 334
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNS+I C Q G ++A+E+F RM SG+ PD+ TL S++S C++ G Q H
Sbjct: 335 VVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHC 394
Query: 277 RLMRCEKLRN-DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C+ + + L N+L+DMYAKCG L A +F MP +N
Sbjct: 395 YI--CDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKN----------------- 435
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
VVSWN +I +G EEA+ +F+ ++ + P TF LL+AC
Sbjct: 436 --------------VVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSAC 481
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
++ + +GR + ++ R G E ++D+ + G + + + + M V+
Sbjct: 482 SHSGLVDMGRY-YFDIMISTFRISPGVEH----YACMVDLLGRGGFLGEAMTLIQKMPVK 536
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
D V W A++ C G A + K++L G
Sbjct: 537 PDVVVWGALLGACRIYGNLEIAKQIMKQLLELG 569
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 59/286 (20%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
PTH T +LL+ C+++ L+L H ++ HGL + + L+ + ++ G +
Sbjct: 37 PTHQTLHHLLDQCSSMKRLKL---VHAQIILHGL------AAQVVTLGKLLSLCVQEGDL 87
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+F+ + + + +N +I G + + ++L LF++M+ G P+ T VL AC
Sbjct: 88 RYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKAC 147
Query: 503 S-----------HAGLVEEG------------------------RKYFSSMSKEHGLAPL 527
+ HA ++ G R+ F +S ++
Sbjct: 148 AAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVS-- 205
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
+ M+ + G DEA L + M ++ D SLL+A H N+ LG +V
Sbjct: 206 ---WNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHL 262
Query: 585 KL----LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ +EI+ + L +MYA+ G V M + VV
Sbjct: 263 YIVITGVEIDSIVTNA---LIDMYAKCGHLQFAKHVFDQMLDKDVV 305
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/613 (38%), Positives = 349/613 (56%), Gaps = 50/613 (8%)
Query: 89 NSIITGLLKWGF--IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM--HS 144
N +I +L G + A +FA D +WNSM+ F + AL + +M S
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N ++F S L CA ++FK+G +H + K SD+Y+ + L++MY CG +
Sbjct: 74 RNVP-DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +F+ M RN V W S+I+ Y +N ++AL ++ +M G PDEVT+A++VSACA
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G+++H+ + R ++ VLG+ALV+MYAKCG L
Sbjct: 193 LKDLGVGMKLHSHI-REMDMKICAVLGSALVNMYAKCGDL-------------------- 231
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCP 383
K+AR +F ++ +++V +W+ALI GY +N + EAL LFR + S + P
Sbjct: 232 -----------KTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +++ACA L DL+ GR H ++ + + + + + NSLIDM+ KCG ++
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITR------TQKGHSVSLNNSLIDMFSKCGDID 334
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
RIF++M +D +SWN+M+ G A +G G EAL F M +PD +T IGVL ACS
Sbjct: 335 AAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACS 394
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV+EG+K F + +G+ +HY CMVDLL RAG L EA+ I MP+QPD IW
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIW 454
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
GS+L AC+V+ N+ LGE A+ LLE+EP+N G Y+LLSN+YA W EV +VR+LM ++
Sbjct: 455 GSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEK 514
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------ 677
G+ K PGCS + I + F+ D HP EI ++L+ + ++K VGYV + S
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNI 574
Query: 678 DDEAYEEQNGSNS 690
DD EE +S
Sbjct: 575 DDNKKEESVSQHS 587
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 222/454 (48%), Gaps = 74/454 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL C + +H +++K S+++I+ L+++YA CG L AR +F
Sbjct: 78 DRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF 137
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++N W S+I+G +K + C +EAL
Sbjct: 138 ERMGHRNKVVWTSMISGYMK-----------------NHCP--------------NEALL 166
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ KM + F+ E + + +SACA D +G ++H+ + + +GSAL++MY
Sbjct: 167 LYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYA 226
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTL 255
KCG + AR+VFD + ++++ +W++LI Y +N +++AL++F R +A G + P+EVT+
Sbjct: 227 KCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF-REVAGGSNMRPNEVTI 285
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V+SACA L + G +H + R +K + + L N+L+DM++KCG ++ A+ +FD M
Sbjct: 286 LAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS 344
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++++S WN+++ G +G EAL F L
Sbjct: 345 YKDLIS-------------------------------WNSMVNGLALHGLGREALAQFHL 373
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV-VKHGLRFLSGEESDIFVGNSLID 434
++ + P TF +L AC++ +Q G++ + +G+R S ++D
Sbjct: 374 MQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYG------CMVD 427
Query: 435 MYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ + G + + M ++ D W +M+ C
Sbjct: 428 LLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/576 (36%), Positives = 343/576 (59%), Gaps = 42/576 (7%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F MPER+ +W M++ FAQ +A+ F+ M + +++ S LSAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC---GRVSCARRVFDGMRERNIVSW 220
+G Q+H+ + + + DV +G +L+DMY KC G V +R+VF+ M E N++SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 221 NSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
++IT Y Q+G +A+E+F +M++ I P+ + +SV+ AC +L+ G Q+++ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ + V GN+L+ MYA+ G++ + AR
Sbjct: 184 KLGIASVNCV-GNSLISMYARSGRM-------------------------------EDAR 211
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F + E+N+VS+NA++ GY +N ++EEA LF + + + +TF +LL+ A++
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ G Q H ++K G + S+ + N+LI MY +CG++E ++F M +R+ +S
Sbjct: 272 AMGKGEQIHGRLLKGGYK------SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 325
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W +MI G A++G+ T AL +F KML G KP+ +T + VL ACSH G++ EG+K+F+SM
Sbjct: 326 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 385
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
KEHG+ P +HY CMVDLLGR+G L EA I +MP+ DA++W +LL AC+VH N LG
Sbjct: 386 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 445
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
+ A+ +LE EP + Y+LLSN++A G+W +VV++RK M++R ++K+ GCSWIE+
Sbjct: 446 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 505
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
V+ F V + HP +IY L L ++K +GY+P+
Sbjct: 506 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 541
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 224/481 (46%), Gaps = 78/481 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D ++ +L +C ++ +++H+R+I+ A ++ + L+D+YAKC G + +R
Sbjct: 50 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 109
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
KVF++M NV +W +IIT + G D E
Sbjct: 110 KVFEQMPEHNVMSWTAIITAYAQSGECD------------------------------KE 139
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ F KM S + + +SF S L AC D G QV++ K +S +G++LI
Sbjct: 140 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 199
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + GR+ AR+ FD + E+N+VS+N+++ Y +N + +A +F + +GI T
Sbjct: 200 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 259
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++S AS+ A +G QIH RL++ N + NAL+ MY++CG + A VF+ M
Sbjct: 260 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC-NALISMYSRCGNIEAAFQVFNEM 318
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEAL 370
RNV+S TSM++G+AK A MF KMLE N +++ A+++ + G E
Sbjct: 319 EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQ 378
Query: 371 GLFR-LLKRESVCP--THY------------------------------TFGNLLNACAN 397
F + K + P HY + LL AC
Sbjct: 379 KHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRV 438
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
+ +LGR A + L E D L +++ G +D +I ++M ER+
Sbjct: 439 HGNTELGRHAAEMI-------LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNL 491
Query: 458 V 458
+
Sbjct: 492 I 492
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/659 (35%), Positives = 364/659 (55%), Gaps = 69/659 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA +L V R++H +++S + N L+ VY+K L ARK+F
Sbjct: 110 DSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLF 169
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M ++ WN +I G ++ GF+DDAS LF N M+S + D
Sbjct: 170 DMMPQIDLVVWNRMIGGYVQNGFMDDASMLF-----------NEMISAGIKPDSI----- 213
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F S L + A S K ++H + + DVY+ SALID+Y
Sbjct: 214 ---------------TFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYF 258
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC A ++F+ + +IV + ++I+ Y NG DALE+F ++ + P+ +T +S
Sbjct: 259 KCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSS 318
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ ACA LAA K G ++H +++ E L +G+A+++MYAKCG+L+ A +F R+ I+
Sbjct: 319 ILPACAGLAAIKLGRELHGYIIKNE-LEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIK 377
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ + WN++I ++Q+G+ EEA+ LFR +
Sbjct: 378 DAI-------------------------------CWNSIITSFSQDGKPEEAIYLFRQMG 406
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E V T L+ACAN+ L G++ H ++K ESD+F ++LI+MY
Sbjct: 407 MEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAF------ESDLFDMSALINMYA 460
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + +F M E++ V+WN++I +GY ++L LF ML G +PDH+T +
Sbjct: 461 KCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLT 520
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L +C HAG VE+G +YF M++E+G+ +HY CM DL GRAG LDEA +I +MP
Sbjct: 521 ILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFP 580
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P A +WG+LL AC+VH N+ L E ++ LL++EP NSG Y+LL+++ A+ G+W V +++
Sbjct: 581 PAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQ 640
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
LM++RGV K PGCSWIE+ VF D HP + +IY +LK L E+++VGYVP A
Sbjct: 641 HLMKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGYVPQA 699
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 287/589 (48%), Gaps = 73/589 (12%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D F ++ C +V + + I++ F ++F+ + LI +YA GC+ AR+
Sbjct: 7 FPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARR 66
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FDKM +K+ WN +I G ++ G D A +LF M+S A+ D
Sbjct: 67 FFDKMIDKDCVLWNVMINGYVQCGESDSAIKLF-----------KDMMSSEAKPD----- 110
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+F LS + G Q+H L+ +S +G+ L+ +
Sbjct: 111 ---------------SVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTV 155
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K ++ AR++FD M + ++V WN +I Y QNG DA +F M+++GI+PD +T
Sbjct: 156 YSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITF 215
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S + + A ++ K+ +IH ++R + D+ L +AL+D+Y KC A +F+
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVR-HGVILDVYLNSALIDLYFKCRDAVMACKMFNLST 274
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++V T+M+SG Y NG N++AL +FR
Sbjct: 275 KFDIVIYTAMISG-------------------------------YVLNGMNKDALEIFRW 303
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L ++ + P TF ++L ACA LA ++LGR+ H +++K+ L E VG+++++M
Sbjct: 304 LLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNEL------EEKCPVGSAIMNM 357
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG ++ IF + +D + WN++I +Q+G EA+ LF++M + G K D VT+
Sbjct: 358 YAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTV 417
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
L AC++ + G++ M K + L D + ++++ + G L+ A+ + M
Sbjct: 418 SAALSACANIPALHYGKEIHGFMIKGAFESDLFD-MSALINMYAKCGKLNIARLVFNLM- 475
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLLSN 602
+ + V W S++AA H + + +LE I+P + +LS+
Sbjct: 476 QEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P YTF ++ C L +++LG+ +++ G + D+FV +SLI +Y G
Sbjct: 6 VFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGF------DLDMFVASSLIKLYADNG 59
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ED R F+ M+++D V WN MI G Q G A+ LFK M+ KPD VT VL
Sbjct: 60 CIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS 119
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGL--APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
+VE GR+ + GL PL + V GR L +A+ L + MP Q
Sbjct: 120 ISCSEAMVEYGRQ-LHGLVVRSGLDFVPLVGNTLVTVYSKGRQ--LGDARKLFDMMP-QI 175
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
D V+W N M+G YV ++
Sbjct: 176 DLVVW-----------NRMIGGYVQNGFMD 194
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 325/526 (61%), Gaps = 43/526 (8%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + L C K G VH + S + D+ + ++L+ MY +CG + ARR+FD M
Sbjct: 77 YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP 136
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++VSW S+IT Y QN ASDAL +F RM++ G EP+E TL+S+V C +A++ G Q
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196
Query: 274 IHARLMRCEKL--RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
IHA C K +++ +G++LVDMYA+C GY
Sbjct: 197 IHAC---CWKYGCHSNVFVGSSLVDMYARC--------------------------GY-- 225
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ A L+F K+ +N VSWNALIAGY + GE EEAL LF ++RE PT +T+ L
Sbjct: 226 ---LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSAL 282
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L++C+++ L+ G+ H H++K + + +VGN+L+ MY K GS+ D ++F+
Sbjct: 283 LSSCSSMGCLEQGKWLHAHLMKSSQKLVG------YVGNTLLHMYAKSGSIRDAEKVFDK 336
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+V+ D VS N+M++G AQ+G G EA F +M+ G +P+ +T + VL ACSHA L++EG
Sbjct: 337 LVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEG 396
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ YF M K + + P HY +VDLLGRAG LD+AK+ IE MP++P IWG+LL A K
Sbjct: 397 KHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASK 455
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H+N +G Y A+++ E++PS G + LL+N+YA GRW +V +VRK+M+ GV K+P C
Sbjct: 456 MHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPAC 515
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+E+ V+VF+ D HP ++I+ + + L +++K +GYVP+ S
Sbjct: 516 SWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTS 561
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 206/394 (52%), Gaps = 48/394 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + + LL C + + + + VH ++ S F ++ IQN L+ +YA+CG L GAR
Sbjct: 73 DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR--- 129
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
RLF MP RD SW SM++G+AQ+DR S+AL
Sbjct: 130 ----------------------------RLFDEMPHRDMVSWTSMITGYAQNDRASDALL 161
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M S+ +E++ S + C + G Q+HA K S+V++GS+L+DMY
Sbjct: 162 LFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYA 221
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A VFD + +N VSWN+LI Y + G +AL +FVRM G P E T ++
Sbjct: 222 RCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSA 281
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S+C+S+ ++G +HA LM+ + V GN L+ MYAK G + +A VFD++
Sbjct: 282 LLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYV-GNTLLHMYAKSGSIRDAEKVFDKLVKV 340
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLF 373
+VVS SM+ GYA+ K A F +M +E N +++ +++ + +E F
Sbjct: 341 DVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF 400
Query: 374 RLLKRESVCP--THYTFGNLLNACANLADLQLGR 405
L+++ ++ P +HY A + DL LGR
Sbjct: 401 GLMRKYNIEPKVSHY---------ATIVDL-LGR 424
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 32/323 (9%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+++ D A + + L+ C S + R++HA K S +F+ + L+D+YA+CG
Sbjct: 165 RMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCG 224
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A VFDK+ KN +WN++I +G+A+
Sbjct: 225 YLGEAMLVFDKLGCKNEVSWNALI-------------------------------AGYAR 253
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
EAL FV+M E + +E+++ + LS+C+ + G +HA L KS Y+
Sbjct: 254 KGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYV 313
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+ L+ MY K G + A +VFD + + ++VS NS++ Y Q+G +A + F M+ GI
Sbjct: 314 GNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGI 373
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
EP+++T SV++AC+ EG LMR + + +VD+ + G L++A+
Sbjct: 374 EPNDITFLSVLTACSHARLLDEGKHYFG-LMRKYNIEPKVSHYATIVDLLGRAGLLDQAK 432
Query: 309 CVFDRMPIRNVVSETSMVSGYAK 331
+ MPI V+ + G +K
Sbjct: 433 SFIEEMPIEPTVAIWGALLGASK 455
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/642 (35%), Positives = 353/642 (54%), Gaps = 72/642 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+VHA+ IK + S++ +QN L+ +Y+K G
Sbjct: 168 RQVHAQAIKWESGSDLIVQNALVTMYSKSGS----------------------------- 198
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA-LSEYSFGSA 157
+ D LF + ++D SW S+++G AQ R +AL F +M +E +E+ FGS
Sbjct: 199 --VGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSV 256
Query: 158 LSACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
AC+ V+ + G Q+H + K + + Y G +L DMY +C + AR+VF + +
Sbjct: 257 FRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPD 316
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNSLI + G S+A+ +F M SG+ PD +T+ +++ AC A +G IH+
Sbjct: 317 LVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHS 376
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
L++ L D+++ N+L+ MYA RC+
Sbjct: 377 YLVKL-GLGGDVIVSNSLLSMYA--------RCL-----------------------DFS 404
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
SA +F + +R+VV+WN+++ Q+ E+ LF LL R + N+L+A A
Sbjct: 405 SAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASA 464
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VER 455
L ++ +Q H + K GL D + N LID Y KCGS++D ++FE M R
Sbjct: 465 ELGYFEMVKQVHAYAFKVGL------VGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGR 518
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D SW+++IVG AQ GY EAL LF +M G KP+HVT +GVL ACS GLV+EG Y+
Sbjct: 519 DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYY 578
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
S M E+G+ P ++H +C++DLL RAG L EA ++ MP +PD ++W +LLAA + H +
Sbjct: 579 SIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHND 638
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ +G+ A+ +L I+PS+S YVLL N+YA G W E R++K MR GV K PG SWI+
Sbjct: 639 VDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIK 698
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ G + VF+V+D+ HP + EIY +L+++ EM + GY+P S
Sbjct: 699 LKGELKVFIVEDRSHPESDEIYTMLEVIGLEMVKAGYIPELS 740
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 85/194 (43%), Gaps = 40/194 (20%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
++VHA K + + N LID YAKCG L
Sbjct: 472 VKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSL--------------------------- 504
Query: 98 WGFIDDASRLFASMPE-RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
DDA++LF M RD SW+S++ G+AQ EAL F +M + + +F
Sbjct: 505 ----DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVG 560
Query: 157 ALSACA--GSVDFKMGTQVHALLSKSRYS--SDVYMGSALIDMYGKCGRVSCARRVFDGM 212
L+AC+ G VD G ++++ K Y S ++D+ + GR+S A + D M
Sbjct: 561 VLTACSRVGLVD--EGCYYYSIM-KPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQM 617
Query: 213 R-ERNIVSWNSLIT 225
E +I+ W +L+
Sbjct: 618 PFEPDIIMWKTLLA 631
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/743 (31%), Positives = 388/743 (52%), Gaps = 106/743 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A L +C +S++VS ++VH ++ +++ LI++YAK GC
Sbjct: 117 LASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC------------ 164
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
ID A +F ++P ++ +W ++++G++Q + AL F K
Sbjct: 165 -------------------IDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGK 205
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + SA+SAC+ + G Q H + +D + +ALID+Y KC R
Sbjct: 206 MGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSR 265
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S AR++FD M RN+VSW ++I Y QN ++A+ +F ++ G +PD AS++++
Sbjct: 266 LSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNS 325
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKL-----------RNDLVLG 291
C SLAA +G Q+HA ++ CE L +D +
Sbjct: 326 CGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISY 385
Query: 292 NALVDMYAKCGKLNEARCVFDRM--------PIR-------------------------- 317
NA+++ Y++ G L A VF +M P+
Sbjct: 386 NAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVK 445
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++ + +S++ Y+K S V+ A+ +F M R++V WNA+I G QN + EEA+ L
Sbjct: 446 SGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKL 505
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L+ + P +TF L+ + L + G+Q H ++K +G +SD V N+L
Sbjct: 506 FNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIK------AGADSDHHVSNAL 559
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +++G +FE+ + +D + WN+MI AQ+G EAL +F+ M G +P++
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT +GVL AC+HAGLV+EG ++F M ++ + P +HY +V+L GR+G L AK IE
Sbjct: 620 VTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIE 679
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++P A +W SLL+AC + N+ +G Y + L +P++SGP VL+SN+YA G W +
Sbjct: 680 RMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSD 739
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
++R+ M GVVK+PG SWIE++ V+ F+ + + HP IY +L LT +K GY
Sbjct: 740 AQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGY 799
Query: 673 VPNASDDEAYEEQNGSNSTSDCQ 695
+P+ S+ +E + DC
Sbjct: 800 LPDTSELTLLDEWLMMITHGDCH 822
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 280/578 (48%), Gaps = 77/578 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRV-HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
A+LL SCL + + HAR + + ++F+ N L+ Y+K G + AR++FD+M
Sbjct: 13 LAQLLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM 72
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+KN+ +W S I+ + G +DA LFA+ F A G
Sbjct: 73 PHKNLVSWGSAISMHAQHGCEEDAVALFAA---------------------FQRASG--- 108
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
A +E+ SAL ACA S G QVH + + +VY+G+ALI++Y K G
Sbjct: 109 -----GEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVG 163
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A VFD + +N V+W ++IT Y Q G ALE+F +M G+ PD LAS VS
Sbjct: 164 CIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVS 223
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC++L + G Q H R + D + NAL+D+Y KC +L+ AR +FD M RN+V
Sbjct: 224 ACSALGFLEGGRQTHGYAYRI-AVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLV 282
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S T+M++G Y QN + EA+ +F L +E
Sbjct: 283 SWTTMIAG-------------------------------YMQNSCDAEAMAMFWQLSQEG 311
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P + ++LN+C +LA + GRQ H H +K L ESD +V NSLIDMY KC
Sbjct: 312 WQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANL------ESDEYVKNSLIDMYAKCE 365
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ + +FE + E D +S+NAMI G ++ G A+ +F KM C KP +T + +L
Sbjct: 366 HLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLG 425
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
S +E ++ + K D Y + ++D+ + +++AK + M +
Sbjct: 426 VSSSQSAIELSKQIHGLIVKS---GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR- 481
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
D VIW +++ + GE K +++ S P
Sbjct: 482 DMVIWNAMIFGLAQNEQ---GEEAVKLFNQLQVSGLAP 516
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/552 (24%), Positives = 235/552 (42%), Gaps = 123/552 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A + +C + R+ H + ++ + N LID+Y KC L ARK+F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP------------------------- 112
D M N+N+ +W ++I G ++ +A +F +
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 113 --------------ERDQCSWNSMVSGFAQHDRFSEAL-------------------GY- 138
E D+ NS++ +A+ + +EA GY
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393
Query: 139 -----------FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
F KM + S +F S L + ++ Q+H L+ KS S D+Y
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
GS+LID+Y K V A+ VF+ M R++V WN++I QN +A+++F ++ SG
Sbjct: 454 AGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSG 513
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+E T ++V+ ++L + G Q HA++++ +D + NAL+DMYAKCG + E
Sbjct: 514 LAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGA-DSDHHVSNALIDMYAKCGFIKEG 572
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +F+ ++V+ SM+S YA Q+G+ E
Sbjct: 573 RLLFESTLGKDVICWNSMISTYA-------------------------------QHGQAE 601
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EAL +FR++ V P + TF +L+AC AH +V GLR ++
Sbjct: 602 EALYVFRMMGGTGVEPNYVTFVGVLSAC-----------AHAGLVDEGLRHFDFMKTKYA 650
Query: 428 VGN------SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
+ S+++++ + G + E M +E W +++ C + +G +G +
Sbjct: 651 IEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSAC--HLFGNVEIGRY 708
Query: 481 -KKMLLCGEKPD 491
+M L + D
Sbjct: 709 ATEMALLADPAD 720
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
TH LL +C LA +L R + H ++G D+F+ N L+ Y K G V
Sbjct: 9 THGGLAQLLLSC--LAGDRLHRLL---PLAHARAVVTGALPDLFLANLLLRAYSKLGRVR 63
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC--GEKPDHVTMIGVLCA 501
D R+F+ M ++ VSW + I AQ+G +A+ LF GE P+ + L A
Sbjct: 64 DARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRA 123
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+ + V G++ ++ GL T +++L + GC+D A + +A+P++ + V
Sbjct: 124 CAQSRAVSFGQQ-VHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVK-NPV 181
Query: 562 IWGSLL 567
W +++
Sbjct: 182 TWTAVI 187
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/661 (35%), Positives = 362/661 (54%), Gaps = 77/661 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L SC + D + + ++K F S+++IQN LI++YA CG L ARK
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARK-- 182
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
VF +S++ D SWNSM++G+ EA
Sbjct: 183 -------VFDGSSVL----------------------DMVSWNSMLAGYVLVGNVEEAKD 213
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M N V +++I ++G
Sbjct: 214 VYDRMPERN---------------------------------------VIASNSMIVLFG 234
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V A ++F+ M+++++VSW++LI+CYEQN +AL +F M A+GI DEV + S
Sbjct: 235 KKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLS 294
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ L G +H +++ + + L NAL+ MY+ C ++ A+ +F
Sbjct: 295 VLSACSRLLVVITGKLVHGLVVKV-GIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCL 353
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +S SM+SGY K ++ AR +F M +++ VSW+A+I+GY Q E L LF+ ++
Sbjct: 354 DQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQ 413
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E P ++++AC +LA L G+ H ++ K+GL+ +I +G +LI+MYM
Sbjct: 414 IEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI------NIILGTTLINMYM 467
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K G VED +F+ + E+ +WNA+I+G A NG ++L F +M G P+ +T +
Sbjct: 468 KLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVA 527
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC H GLV+EG ++F+SM +EH + P HY CMVDLLGRAG L EA+ LIE+MPM
Sbjct: 528 VLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMA 587
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD WG+LL ACK + + GE + +KL+E+ P + G VLLSN+YA G W +V+ VR
Sbjct: 588 PDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVR 647
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+MR+ GVVK PGCS IE G V+ F+ DK HP N+ I +L + +++K GY P+
Sbjct: 648 GMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTR 707
Query: 678 D 678
+
Sbjct: 708 E 708
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 32/386 (8%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ + +D +L +C R V + VH ++K + + +QN LI +Y+ C
Sbjct: 278 KEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ A+K+F + + +WNS+I+G +K G I+ A LF SMP++D SW++M+SG+A
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q DRF+E L F +M E E S +SAC G +HA + K+ ++
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+ LI+MY K G V A VF G+ E+ + +WN+LI NG +L+ F M G
Sbjct: 458 LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHG 517
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+E+T +V+ AC + EG + +++ K+ ++ +VD+ + G L EA
Sbjct: 518 VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEA 577
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ + MP + +V +W AL+ + G+NE
Sbjct: 578 EELIESMP------------------------------MAPDVSTWGALLGACKKYGDNE 607
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLN 393
+ R K + P H F LL+
Sbjct: 608 TGERIGR--KLVELHPDHDGFNVLLS 631
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 155/345 (44%), Gaps = 32/345 (9%)
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS------VKSARLMFTKMLERNVVSW 353
KC + + + +M + ++ S K S+ + + +F+ + N
Sbjct: 35 KCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFIC 94
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA-NLADLQLGRQAHTHVV 412
N ++ GY Q +A+ +++ + +V +YT+ L +C+ LA+ G+ HV+
Sbjct: 95 NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVL 153
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K G +SD+++ N+LI+MY CG++ D ++F+ D VSWN+M+ G G
Sbjct: 154 KVGF------DSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGN 207
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EA ++ +M + + + ++ G VEE K F+ M ++ ++ ++
Sbjct: 208 VEEAKDVYDRM----PERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVS-----WS 258
Query: 533 CMVDLLGRAGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
++ + +EA L + M + D V+ S+L+AC ++ G+ V ++++
Sbjct: 259 ALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV 318
Query: 590 EPSNSGPYVLLSNMYAEL-GRWGEVVRVRKLMRKRGVVKQPGCSW 633
YV L N + EVV +KL + + Q SW
Sbjct: 319 GIET---YVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQ--ISW 358
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/651 (35%), Positives = 363/651 (55%), Gaps = 69/651 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ SC R++HA ++KS+F +++ QN LI +Y K F
Sbjct: 198 DHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTK----------F 247
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M+ DA +F+ + +D SW SM++GF+Q EAL
Sbjct: 248 SQMA---------------------DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALC 286
Query: 138 YFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F +M S++ + +E+ FGSA SAC+ ++ G Q+H L K SD++ G +L DMY
Sbjct: 287 HFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMY 346
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + AR VF + + ++V+WN++I + A ++ F +M +G+ P++VT+
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC+ G+Q+H+ +++ D+ + N+L+ MY+KC LN+A VF+ I
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIPVCNSLLSMYSKCSNLNDALQVFED--I 463
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N + ++VSWN L+ Q + E L L +L+
Sbjct: 464 GN----------------------------KADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P H T N+L + +A ++G Q H ++K GL DI V N+LI+MY
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL------DISVSNALINMY 549
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+E ++F+++ D +SW+++IVG AQ G G EA LF+ M G KP+ +T +
Sbjct: 550 TKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFV 609
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L ACSH G+VEEG K + +M +++ ++P K+H +CMVDLL RAGCLD A+ I MP
Sbjct: 610 GILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPF 669
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
PD V+W +LLAACKVH N+ +G+ A+ +L+I+PSNS V+L N++A G W + R+
Sbjct: 670 VPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARL 729
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
R MR+ V K PG SWIEI V+VF+ +D HP +IY +L+ L ++
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 264/553 (47%), Gaps = 73/553 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S + L+++C +S+ R++H ++ + ++ +QN ++ +Y KCG L AR +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD SMP ++ SW SM+SG++++ A+
Sbjct: 156 FD-------------------------------SMPLKNVVSWTSMISGYSRYGEEDNAI 184
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V+M ++FGS + +C+G DFK+ Q+HA + KS + +D+ +ALI MY
Sbjct: 185 TLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY 244
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTL 255
K +++ A VF + ++++SW S+I + Q G +AL F M++ + +P+E
Sbjct: 245 TKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVF 304
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S SAC+ L G QIH ++ L +DL G +L DMYAKCG L AR VF +
Sbjct: 305 GSAFSACSKLLEPDCGRQIHGLCIKF-GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIE 363
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++V+ ++++G+A S+ K + F++M +V
Sbjct: 364 KPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLV------------------------ 399
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
P T +LL AC+ L G Q H+++VK G DI V NSL+ M
Sbjct: 400 -------PNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL------DIPVCNSLLSM 446
Query: 436 YMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KC ++ D ++FE + + D VSWN ++ C Q E L L K M KPDHVT
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ VL + E G + + K GL ++++ + G L+ A+ + +++
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGSLECARKMFDSI 565
Query: 555 PMQPDAVIWGSLL 567
PD + W SL+
Sbjct: 566 G-NPDIISWSSLI 577
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 222/445 (49%), Gaps = 46/445 (10%)
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
H +A F K S L ++ ++AC+ + G ++H + Y D+ +
Sbjct: 78 HREALKAFDIFQKCSSS--PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMIL 135
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+ ++ MYGKCG + AR +FD M +N+VSW S+I+ Y + G +A+ ++V+M+ SG
Sbjct: 136 QNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGH 195
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T S+V +C+ L FK Q+HA +++ E DL+ NAL+ MY K ++ +A
Sbjct: 196 IPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE-FGADLIAQNALISMYTKFSQMADAI 254
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF R+ I++++S SM++G ++Q G E
Sbjct: 255 NVFSRIIIKDLISWGSMIAG-------------------------------FSQLGYELE 283
Query: 369 ALGLFRLLKRESVC-PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
AL FR + +SV P + FG+ +AC+ L + GRQ H +K GL SD+F
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL------GSDLF 337
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
G SL DMY KCG +E +F + + D V+WNA+I G A E+ F +M G
Sbjct: 338 AGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTG 397
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLD 545
P+ VT++ +LCACS ++ G + S + K + D C ++ + + L+
Sbjct: 398 LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK---MGFNLDIPVCNSLLSMYSKCSNLN 454
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAAC 570
+A + E + + D V W +LL AC
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTAC 479
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 369/660 (55%), Gaps = 71/660 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ ++++C S+ + R+VHA ++++ + ++F N L+D+Y+K G ++ A VF K+
Sbjct: 205 FSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVP 264
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WN+ I+G ++ G QH AL ++
Sbjct: 265 KTDVVSWNAFISG--------------------------CVLHGHDQH-----ALELLLQ 293
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGT--QVHALLSKSRYSSDVYMGSALIDMYGKC 199
M S + ++ S L ACAG+ Q+H + K+ SD Y+G AL+DMY K
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKY 353
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VF+ + ++++ WN+LI+ G ++L +F RM G + + TLA+V+
Sbjct: 354 GLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ ASL A + Q+HA + L + V+ N L+D Y KC L A VF+ N+
Sbjct: 414 KSTASLEAISDTTQVHALAEKIGFLSDSHVV-NGLIDSYWKCNCLRYANKVFEEHSSDNI 472
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ TSM I +Q E+A+ LF + R+
Sbjct: 473 IAFTSM-------------------------------ITALSQCDHGEDAIKLFMEMLRK 501
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + +LLNACA+L+ + G+Q H H++K +F+ +D+F GN+L+ Y KC
Sbjct: 502 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--KFM----TDVFAGNALVYTYAKC 555
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ED F + ++ VSW+AMI G AQ+G+G AL +F++M+ P+H+T+ VL
Sbjct: 556 GSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL 615
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAGLV+E + YFSSM + G+ ++HY+CM+DLLGRAG LD+A L+ +MP + +
Sbjct: 616 CACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEAN 675
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LLAA +VHR+ LG+ A+KL +EP SG +VLL+N YA G W EV +VRKL
Sbjct: 676 AAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKL 735
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ V K+P SW+E+ V+ F+V DK HP ++IY L+ L M + GYVPN D
Sbjct: 736 MKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVD 795
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 256/567 (45%), Gaps = 110/567 (19%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+HA ++KS +N L+ Y+KC AR+VFD+
Sbjct: 25 HIHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDET------------------- 63
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
P+ SW+S+V+ ++ + EAL F M + +E++ L
Sbjct: 64 ------------PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK 111
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD-GMRERNIV 218
CA D +G QVHA+ + S D+++ +AL+ MYG G V ARRVFD R+RN V
Sbjct: 112 -CAP--DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAV 168
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWN +++ + +N SDA+E+F M+ SG+ P+E + VV+AC + G ++HA +
Sbjct: 169 SWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMV 228
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R D+ NALVDMY+K G ++ A VF ++P
Sbjct: 229 VRT-GYDKDVFTANALVDMYSKLGDIHMAALVFGKVP----------------------- 264
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN--ACA 396
+ +VVSWNA I+G +G ++ AL L +K + P +T ++L A A
Sbjct: 265 --------KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
LGRQ H ++K + +SD ++G +L+DMY K G ++D ++FE + +D
Sbjct: 317 GAGAFALGRQIHGFMIK------ACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKD 370
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC------ACSHAGLVEE 510
+ WNA+I GC+ G E+L LF +M G + T+ VL A S V
Sbjct: 371 LLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHA 430
Query: 511 GRKYFSSMSKEHGLAPLKDHY------------------------TCMVDLLGRAGCLDE 546
+ +S H + L D Y T M+ L + ++
Sbjct: 431 LAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGED 490
Query: 547 AKTLIEAM---PMQPDAVIWGSLLAAC 570
A L M ++PD + SLL AC
Sbjct: 491 AIKLFMEMLRKGLEPDPFVLSSLLNAC 517
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 203/424 (47%), Gaps = 48/424 (11%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S S L+ A + +G +HA L KS + L+ Y KC ARRVF
Sbjct: 3 SPESISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVF 60
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D + VSW+SL+T Y N +AL F M A G+ +E L +V CA A
Sbjct: 61 DETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFAL-PIVLKCAPDAGL- 118
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G+Q+HA + L D+ + NALV MY G ++EAR VFD
Sbjct: 119 -GVQVHA-VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFD----------------- 159
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
++AR +RN VSWN +++ + +N +A+ LF + V P + F
Sbjct: 160 ------EAAR-------DRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFS 206
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++NAC DL+ GR+ H VV+ +G + D+F N+L+DMY K G + +F
Sbjct: 207 CVVNACTGSRDLEAGRKVHAMVVR------TGYDKDVFTANALVDMYSKLGDIHMAALVF 260
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL--CACSHAGL 507
+ + D VSWNA I GC +G+ AL L +M G P+ T+ +L CA + AG
Sbjct: 261 GKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGA 320
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
GR+ M K A D+ +VD+ + G LD+A+ + E +P + D ++W +L
Sbjct: 321 FALGRQIHGFMIK--ACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNAL 377
Query: 567 LAAC 570
++ C
Sbjct: 378 ISGC 381
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 146/300 (48%), Gaps = 31/300 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + A +L S +++SDT +VHA K F S+ + N LID Y KC CL A KV
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ S+ N+ + S+IT L QC D +A+
Sbjct: 464 FEEHSSDNIIAFTSMITAL-------------------SQC------------DHGEDAI 492
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F++M + + S L+ACA ++ G QVHA L K ++ +DV+ G+AL+ Y
Sbjct: 493 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTY 552
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A F G+ ++ +VSW+++I Q+G AL+VF RM+ I P+ +TL
Sbjct: 553 AKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLT 612
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC E + + + + ++D+ + GKL++A + + MP
Sbjct: 613 SVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 672
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ PF + LL++C + ++VHA +IK +F +++F N L+ YAKCG + A
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F + +K V +W ++M+ G AQH
Sbjct: 563 LAFSGLPDKGVVSW-------------------------------SAMIGGLAQHGHGKR 591
Query: 135 ALGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMG--TQVHALLSKSRYSSDVYMGS 190
AL F +M E A + + S L AC AG VD G + + + R + + Y S
Sbjct: 592 ALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDR-TEEHY--S 648
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+ID+ G+ G++ A + + M E N W +L+
Sbjct: 649 CMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 334/587 (56%), Gaps = 39/587 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS++ LK +D A ++F M ERD SWNS+++G+ + + L FV+M
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ + S + CA S +G VH++ K+ +S + + L+DMY KCG + A+ V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M +R++VS+ S+I Y + G A +A+++F M GI PD T+ +V++ CA
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
EG ++H ++ L D+ + NAL+DMYAKCG + E
Sbjct: 414 DEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQE---------------------- 450
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYT 387
A L+F++M ++++SWN +I GY++N EAL LF LL E P T
Sbjct: 451 ---------AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+L ACA+L+ GR+ H +++++G SD V NSL+DMY KCG++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYF------SDRHVANSLVDMYAKCGALLLAHM 555
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ + +D VSW MI G +G+G EA+ LF +M G + D ++ + +L ACSH+GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG ++F+ M E + P +HY C+VD+L R G L +A IE MP+ PDA IWG+LL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
C++H ++ L E VA+K+ E+EP N+G YVL++N+YAE +W +V R+RK + +RG+ K
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 735
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
PGCSWIEI G VN+F+ D +P + I L+ + M GY P
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 82/459 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + + C S+ +S R VH+ +K+ F+ E N L+D+Y+KCG L A+ V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +MS+++V ++ S+I G + G +A +LF M E
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------------------- 390
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
E + Y+ + L+ CA G +VH + ++ D+++ +AL+DMY
Sbjct: 391 --------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTL 255
KCG + A VF MR ++I+SWN++I Y +N A++AL +F ++ PDE T+
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
A V+ ACASL+AF +G +IH +MR +D + N+LVDMYAKCG L A +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++VS T M++GY +G +EA+ LF
Sbjct: 562 SKDLVSWTVMIAGYG-------------------------------MHGFGKEAIALFNQ 590
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS---- 431
+++ + +F +LL AC +H+ +V G RF + + + +
Sbjct: 591 MRQAGIEADEISFVSLLYAC-----------SHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 432 --LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++DM + G + R E M + D W A++ GC
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 221/491 (45%), Gaps = 84/491 (17%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L CA S K G +V + + + D +GS L MY CG + A RVFD ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ WN L+ ++G S ++ +F +MM+SG+E D T + V + +SL + G Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + V GN+LV Y K +++ AR VFD M R+V+S S+++GY
Sbjct: 219 GFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 336 KSARLMFTKML-------------------ERNVVSW--------------------NAL 356
+ +F +ML + ++S N L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 357 IAGYTQNGENEEALGLFRLL-------------------------------KRESVCPTH 385
+ Y++ G+ + A +FR + + E + P
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
YT +LN CA L G++ H + ++ L F DIFV N+L+DMY KCGS+++
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF------DIFVSNALMDMYAKCGSMQEA 451
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCAC 502
+F M +D +SWN +I G ++N Y EAL LF LL EK PD T+ VL AC
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTVACVLPAC 509
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ ++GR+ + + +G + +VD+ + G L A L + + D V
Sbjct: 510 ASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVS 567
Query: 563 WGSLLAACKVH 573
W ++A +H
Sbjct: 568 WTVMIAGYGMH 578
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+R+V N + + ++G E A+ L + + + P T ++L CA+ L+ G+
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
+ + +G D +G+ L MY CG +++ R+F+ + + WN ++
Sbjct: 115 EVDNFIRGNGFVI------DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
A++G + ++GLFKKM+ G + D T V + S V G + + K G
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFG 227
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+V + +D A+ + + M + D + W S++
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSII 268
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/562 (40%), Positives = 329/562 (58%), Gaps = 12/562 (2%)
Query: 80 MSNKNVFTWNSIITGLLKW-----GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
M N N+ T S I L+K I A LF + WN M+ G++ D+ +E
Sbjct: 1 MVNPNLRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNE 60
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ + M+ + + ++ ACA D G+ +HA + K + S +Y+ +ALI+
Sbjct: 61 AIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALIN 120
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYG CG + A++VFD M ER++VSWNSL+ Y Q + L VF M +G++ D VT
Sbjct: 121 MYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVT 180
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ VV AC SL + + + D+ LGN L+DMY + G ++ AR VFD+M
Sbjct: 181 MVKVVLACTSLGEWGVA-DAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQM 239
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
RN+VS +M+ GY KA ++ +AR +F M +R+V+SW +I Y+Q G+ EAL LF+
Sbjct: 240 QWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFK 299
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ V P T ++L+ACA+ L +G AH ++ K+ ++ +DI+VGN+LID
Sbjct: 300 EMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVK------ADIYVGNALID 353
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG VE +F+ M ++D VSW ++I G A NG+ AL F +ML +P H
Sbjct: 354 MYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGA 413
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+G+L AC+HAGLV++G +YF SM K +GL P HY C+VDLL R+G L A I+ M
Sbjct: 414 FVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEM 473
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P+ PD VIW LL+A +VH NI L E KKLLE++PSNSG YVL SN YA RW + V
Sbjct: 474 PVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAV 533
Query: 615 RVRKLMRKRGVVKQPGCSWIEI 636
++R+LM K V K G S IE+
Sbjct: 534 KMRELMEKSNVQKPSGSSCIEM 555
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 213/485 (43%), Gaps = 112/485 (23%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L +C R VS +HAR++K F S +++ N LI++Y CG L A+KVFD+M ++
Sbjct: 83 LFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERD 142
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ +W NS+V G+ Q RF E LG F M
Sbjct: 143 LVSW-------------------------------NSLVCGYGQCKRFREVLGVFEAMRV 171
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + AC ++ + + + ++ DVY+G+ LIDMYG+ G V
Sbjct: 172 AGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHL 231
Query: 205 ARRVFDGMRERNIVSWNS-------------------------------LITCYEQNGPA 233
AR VFD M+ RN+VSWN+ +IT Y Q G
Sbjct: 232 ARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQF 291
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
++AL +F MM S ++PDE+T+ASV+SACA + G H + + + ++ D+ +GNA
Sbjct: 292 TEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYD-VKADIYVGNA 350
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+DMY KCG + +A VF M ++ VS TS++SG A
Sbjct: 351 LIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLA----------------------- 387
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
NG + AL F + RE V P+H F +L AC AH +V
Sbjct: 388 --------VNGFADSALDYFSRMLREVVQPSHGAFVGILLAC-----------AHAGLVD 428
Query: 414 HGLRFLS------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVG 466
GL + G + ++ ++D+ + G+++ + M V D V W ++
Sbjct: 429 KGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSA 488
Query: 467 CAQNG 471
+G
Sbjct: 489 SQVHG 493
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 180/333 (54%), Gaps = 4/333 (1%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
++++ N LID+Y + G ++ AR VFD+M +N+ +WN++I G K G + A LF +M
Sbjct: 212 DVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMS 271
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+RD SW +M++ ++Q +F+EAL F +M E + S LSACA + +G
Sbjct: 272 QRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEA 331
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
H + K +D+Y+G+ALIDMY KCG V A VF MR+++ VSW S+I+ NG
Sbjct: 332 AHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGF 391
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
A AL+ F RM+ ++P ++ ACA +GL+ + + L+ ++
Sbjct: 392 ADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYG 451
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+VD+ ++ G L A MP+ +VV ++S ++ A + K+LE +
Sbjct: 452 CVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPS 511
Query: 352 -SWNALIAGYTQNGEN--EEALGLFRLLKRESV 381
S N +++ T G N E+A+ + L+++ +V
Sbjct: 512 NSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNV 544
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 51/225 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C + S+ H I K ++I++ N LID+Y KCG + A +VF
Sbjct: 309 DEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVF 368
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M K+ +W SII+GL GF D AL
Sbjct: 369 KEMRKKDSVSWTSIISGLAVNGFAD-------------------------------SALD 397
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
YF +M E S +F L AC AG VD F+ +V+ L + ++
Sbjct: 398 YFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHY------G 451
Query: 191 ALIDMYGKCGRVSCARRVFDGMRE----RNIVSWNSLITCYEQNG 231
++D+ + G + +R F+ ++E ++V W L++ + +G
Sbjct: 452 CVVDLLSRSGNL---QRAFEFIKEMPVTPDVVIWRILLSASQVHG 493
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/717 (34%), Positives = 369/717 (51%), Gaps = 118/717 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S+ VHA + + S +FI N ++ +Y +CG L A ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ + + D SWNS+++ + Q + AL
Sbjct: 186 DEVLERKI----------------------------EDIVSWNSILAAYVQGGQSRTALR 217
Query: 138 YFVKM---HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+M +S + + L ACA + G QVH ++ DV++G+AL+
Sbjct: 218 IAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVS 277
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE-------------------------- 228
MY KC +++ A +VF+G++++++VSWN+++T Y
Sbjct: 278 MYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVIT 337
Query: 229 ---------QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
Q G +AL+VF +M G+EP+ VTLAS++S CAS+ A G Q HA ++
Sbjct: 338 WSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVI 397
Query: 280 R------CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM--PIRNVVSETSMVSGYAK 331
+ +DL++ N L+DMYAKC AR +FD + +NVV+ T M+ GYA
Sbjct: 398 KNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYA- 456
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL--KRESVCPTHYTFG 389
Q+GE +AL LF + ++ S+ P +T
Sbjct: 457 ------------------------------QHGEANDALKLFAQIFKQKTSLKPNAFTLS 486
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
L ACA L +L+LGRQ H + +++ E ++VGN LIDMY K G ++ +F
Sbjct: 487 CALMACARLGELRLGRQLHAYALRN-----ENESEVLYVGNCLIDMYSKSGDIDAARAVF 541
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M R+ VSW +++ G +G G EAL LF +M G D +T + VL ACSH+G+V+
Sbjct: 542 DNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVD 601
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G YF M K G+ P +HY CMVDLLGRAG L+EA LI+ M M+P AV+W +LL+A
Sbjct: 602 QGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSA 661
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
++H NI LGEY A KL E+ N G Y LLSN+YA RW +V R+R LM+ G+ K+P
Sbjct: 662 SRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRP 721
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDE 680
GCSWI+ F V D+ HP +++IY +L L + +K +GYVP S DDE
Sbjct: 722 GCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDE 778
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 300/576 (52%), Gaps = 53/576 (9%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
F S P L+ + K++ + + H +I F +E+F + + Y +CG A
Sbjct: 23 TFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGF-TEMF--SYAVGAYIECGASAEAV 79
Query: 75 KVFDKM--SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
+ ++ S+ VF WN++I +K G +DD
Sbjct: 80 SLLQRLIPSHSTVFWWNALIRRSVKLGLLDD----------------------------- 110
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
LG++ +M + Y+F L AC + G VHA++ + S+V++ +++
Sbjct: 111 --TLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSI 168
Query: 193 IDMYGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDALEVFVRM---MAS 246
+ MYG+CG + A ++FD + ER +IVSWNS++ Y Q G + AL + RM +
Sbjct: 169 VAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSL 228
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
+ PD +TL +++ ACAS+ A + G Q+H +R L +D+ +GNALV MYAKC K+NE
Sbjct: 229 KLRPDAITLVNILPACASVFALQHGKQVHGFSVR-NGLVDDVFVGNALVSMYAKCSKMNE 287
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQ 362
A VF+ + ++VVS +MV+GY++ S SA +F M E +V++W+A+IAGY Q
Sbjct: 288 ANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQ 347
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF-LSG 421
G EAL +FR ++ + P T +LL+ CA++ L G+Q H +V+K+ L +
Sbjct: 348 KGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWND 407
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD--WVSWNAMIVGCAQNGYGTEALGL 479
+E D+ V N LIDMY KC S IF+++ +D V+W MI G AQ+G +AL L
Sbjct: 408 KEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKL 467
Query: 480 FKKML--LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
F ++ KP+ T+ L AC+ G + GR+ + + + + C++D+
Sbjct: 468 FAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDM 527
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++G +D A+ + + M ++ + V W SL+ +H
Sbjct: 528 YSKSGDIDAARAVFDNMKLR-NVVSWTSLMTGYGMH 562
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/672 (34%), Positives = 358/672 (53%), Gaps = 71/672 (10%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+V LD S F L+ +C ++ V VH RI+K F + N L+ +Y+KCG
Sbjct: 123 HMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCG 182
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L ++F+KM++ RD SWN+M+S +
Sbjct: 183 KLKEVCQLFEKMTH-------------------------------RDVISWNTMISCYVL 211
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ EAL F +M E + S +S CA D +MG ++H + ++ +
Sbjct: 212 KGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL 271
Query: 189 GSALIDMYGKCGR---------------------------------VSCARRVFDGMRER 215
+ L+DMY KCG+ + AR++FD M ER
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNER 331
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++VSW ++++ Y Q G ++LE+F +M + PDEV L +V+SAC L F G +H
Sbjct: 332 SLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVH 391
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A ++ L D LGNAL+D+YAKCGKL+EA F+++P ++ S SM+ G+ ++ V
Sbjct: 392 AFIVTYGMLV-DGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGV 450
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
AR F K+ E+++VSWN ++ Y ++ E+ +F ++ +V P T +LL++C
Sbjct: 451 DKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSC 510
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A + L G + ++ K+ + D +G +LIDMY KCG VE IF ++E+
Sbjct: 511 AKVGALNHGIWVNVYIEKNEIGI------DAMLGTALIDMYGKCGCVEMAYEIFTQIIEK 564
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
+ W AM+ A G EA+ L+ +M G KPDHVT I +L ACSH GLV+EG KYF
Sbjct: 565 NVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYF 624
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ + + + P HY CMVDLLGR G L+E IE MP++PD IW SL+ AC+ H N
Sbjct: 625 NKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHN 684
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ L E K+L+EI+P+N+G +VLLSN+YA+ GRW +V +VR + + GV KQPG + IE
Sbjct: 685 VELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIE 744
Query: 636 ILGHVNVFMVKD 647
G V+ F+ +
Sbjct: 745 QNGVVHEFVASN 756
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 270/515 (52%), Gaps = 44/515 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+ ++ LL +D A ++ + E + WN+++ + E L + M ++
Sbjct: 71 SQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVL 130
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
L +F + AC + D K+G++VH + K + + + + L+ +Y KCG++ ++
Sbjct: 131 LDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQL 190
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M R+++SWN++I+CY G +AL++F M+ SG+ PDE+T+ S+VS CA L
Sbjct: 191 FEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDL 250
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMV 326
+ G ++H ++ KL L N LVDMY+KCGK++EA + R +VV T++V
Sbjct: 251 EMGKRLHLYIVD-NKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLV 309
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
SGY K++ + AR +F KM ER++VSW +++GY Q G E+L LF+ ++ E+V P
Sbjct: 310 SGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEV 369
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
+L+AC +L D LGR H +V +G+ D F+GN+L+D+Y KCG +++
Sbjct: 370 ALVTVLSACVHLEDFDLGRSVHAFIVTYGMLV------DGFLGNALLDLYAKCGKLDEAL 423
Query: 447 RIFETM-------------------------------VERDWVSWNAMIVGCAQNGYGTE 475
R FE + E+D VSWN M+ ++ E
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK-EHGLAPLKDHYTCM 534
+ +F KM KPD T+I +L +C+ G + G + K E G+ + T +
Sbjct: 484 SFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLG--TAL 541
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D+ G+ GC++ A + + ++ + +W +++AA
Sbjct: 542 IDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMAA 575
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 193/439 (43%), Gaps = 68/439 (15%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L +C+ +F + +HA L + D + S ++ + CA ++ E
Sbjct: 42 LKSCSNIREF---SPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPES 98
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+ WN+L+ + G + LE + M+ G+ D T ++ AC K G ++H R
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++C RN L N L+ +Y+KCGKL E +F++M R+V+S +M+S Y
Sbjct: 159 ILKCGFGRNK-SLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYV------- 210
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
G EAL LF + V P T +L++ CA
Sbjct: 211 ------------------------LKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAK 246
Query: 398 LADLQLGRQAHTHVVK--------------------------HGLRFLSGE-ESDIFVGN 430
L DL++G++ H ++V HGL E E D+ +
Sbjct: 247 LKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWT 306
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y+K ++ ++F+ M ER VSW M+ G Q GY E+L LF++M P
Sbjct: 307 TLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIP 366
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAK 548
D V ++ VL AC H + GR + + +G+ L D + ++DL + G LDEA
Sbjct: 367 DEVALVTVLSACVHLEDFDLGRSVHAFIVT-YGM--LVDGFLGNALLDLYAKCGKLDEAL 423
Query: 549 TLIEAMPMQPDAVIWGSLL 567
E +P + A W S+L
Sbjct: 424 RTFEQLPCK-SAASWNSML 441
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 245/658 (37%), Positives = 371/658 (56%), Gaps = 72/658 (10%)
Query: 22 FAKLLDSCLRSKSVSDT-RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F LL L S ++DT VHA + K ++ F+ LID Y+ CG + AR+VFD +
Sbjct: 107 FTTLL-KLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K D SW MV+ +A++ ++L F
Sbjct: 166 YFK-------------------------------DMVSWTGMVACYAENYCHEDSLLLFC 194
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + + ++ +AL +C G FK+G VH K Y D+Y+G AL+++Y K G
Sbjct: 195 QMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSG 254
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVV 259
++ A++ F+ M + +++ W+ +I+ Y Q+ + +ALE+F RM +S + P+ T ASV+
Sbjct: 255 EIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVL 314
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACASL G QIH+ +++ L +++ + NAL+D+YAKCG++
Sbjct: 315 QACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGEIE-------------- 359
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+SVK +FT E+N V+WN +I GY Q G+ E+AL LF +
Sbjct: 360 -------------NSVK----LFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGL 402
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ PT T+ ++L A A+L L+ GRQ H+ +K + D V NSLIDMY KC
Sbjct: 403 DIQPTEVTYSSVLRASASLVALEPGRQIHSLTIK------TMYNKDSVVANSLIDMYAKC 456
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++D F+ M ++D VSWNA+I G + +G G EAL LF M KP+ +T +GVL
Sbjct: 457 GRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACS+AGL+++GR +F SM +++G+ P +HYTCMV LLGR+G DEA LI +P QP
Sbjct: 517 SACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPS 576
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
++W +LL AC +H+N+ LG+ A+++LE+EP + +VLLSNMYA RW V VRK
Sbjct: 577 VMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKN 636
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+K+ V K+PG SW+E G V+ F V D HP K I+ +L+ L ++ + GYVP+ S
Sbjct: 637 MKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCS 694
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 365/652 (55%), Gaps = 68/652 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C R V RR H ++K S+ F+ LID+YAKCG
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCG----------------- 162
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+D A R++ M D + N ++S +A++ F +A F+++ +
Sbjct: 163 --------------EVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNM 208
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ Y++ + L+ C + G Q+HA + K +Y S+ +G+AL+ +Y KCG + A
Sbjct: 209 GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEA 268
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
VF+ +R+RNI+SW + I + Q+G AL+ F M SGIEP+E T + V+++C +
Sbjct: 269 EIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCV 328
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
F +G H ++++ + + + + +G A++DMY+ G+++EA F +M
Sbjct: 329 KDFIDGRMFHTQVIK-KGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM----------- 376
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
G A ++ VSWNALIAGY N + E+A+ F + +E V
Sbjct: 377 --GRAASN-----------------VSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+T+ N+ AC++ L Q H+ ++K S ES++ V +SLI+ Y +CGS+E+
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIK------SNVESNLHVASSLIEAYTQCGSLENA 471
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
++F + + D VSWN++I +QNG +A+ L +KM+ G KP T + VL ACSH+
Sbjct: 472 VQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHS 531
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLV+EG+++F SM +++ + P + H +CMVD+LGRAG L+ A I+ + M+P A IW
Sbjct: 532 GLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRP 591
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LLAAC+ + N+ + EYVA+K+L++EP+++ YV LSNMYAE+GRW + R+LM ++ +
Sbjct: 592 LLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEI 651
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K+PGCSWIE+ + F DK HP ++Y LK L R+++ +GY P +
Sbjct: 652 SKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTT 703
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 287/529 (54%), Gaps = 46/529 (8%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
F S ++ A+ A G +HA L + Y + L+ Y +CG++S A
Sbjct: 798 TFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNA 857
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R++FD + NI W L + G +AL F M G+ P++ L S++ AC L
Sbjct: 858 RKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHL 917
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ + G +H +++ +D + +AL+ MY+KCG + +A VFD + +++V +M
Sbjct: 918 SDRRTGENMHTVILK-NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAM 976
Query: 326 VSGYAKASSVKSA---------------------------------------RLMFTKML 346
VSGYA+ V A RLM +
Sbjct: 977 VSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV 1036
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E +VVSW ++I+G+ QN N E F+ + + CP+ T +LL AC N+A+L+ G++
Sbjct: 1037 EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 1096
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H G + G E D++V ++L+DMY KCG + + +F M ER+ V+WN++I G
Sbjct: 1097 IH------GYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFG 1150
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A +GY EA+ LF +M K DH+T VL ACSHAG+VE G F M +++ + P
Sbjct: 1151 YANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEP 1210
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+HY CMVDLLGRAG L EA LI+AMP++PD +WG+LL AC+ H NI L E A+ L
Sbjct: 1211 RLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHL 1270
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
E+EP + G +LLSN+YA+ GRWG +++K+M++R K PGCSWIE
Sbjct: 1271 FELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 70/451 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L C ++ + +++HA ++K Q+ SE + N L+ +Y+KCG + A VF+ +
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLR 276
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+N+ +W + I +GF QH F +AL F
Sbjct: 277 QRNIISWTASI-------------------------------NGFYQHGDFKKALKQFSM 305
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E++F L++C DF G H + K +S V++G+A+IDMY G
Sbjct: 306 MRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGE 365
Query: 202 VSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A + F M R + VSWN+LI Y N A+E F RM+ + +E T +++
Sbjct: 366 MDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFK 425
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+S + +QIH+RL++ + ++L + ++L++ Y +CG L A VF ++ +VV
Sbjct: 426 ACSSFPSLATTVQIHSRLIK-SNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVV 484
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S S++ Y+QNG+ +A+ L R + E
Sbjct: 485 SWNSIIK-------------------------------AYSQNGDPWKAIFLLRKMIEEG 513
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
PT TF +L+AC++ +Q G++ +V+ + EE+ + ++D+ + G
Sbjct: 514 NKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQD--YSIQPEETHC---SCMVDILGRAG 568
Query: 441 SVEDGCRIFETMVERDWVS-WNAMIVGCAQN 470
+E+ + + + S W ++ C N
Sbjct: 569 QLENALDFIKKLTMKPTASIWRPLLAACRYN 599
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 215/524 (41%), Gaps = 139/524 (26%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S +AK +D R +++ R +HA ++ A + +L+ Y +CG L ARK+FD
Sbjct: 803 SDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
K+ N T + +W + A A+ + EAL
Sbjct: 863 KIPN----------TNIRRWIVLTGAC---------------------ARRGFYEEALSA 891
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M E +++ S L AC D + G +H ++ K+ + SD Y+ SALI MY K
Sbjct: 892 FSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSK 951
Query: 199 CGRVSCARRVFDGMRER-----------------------------------NIVSWNSL 223
CG V A RVFD + ++ N+VSWN+L
Sbjct: 952 CGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTL 1011
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPD-------------------------------- 251
I + Q G S EVF M A+G+EPD
Sbjct: 1012 IAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGF 1071
Query: 252 ---EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
VT++S++ AC ++A + G +IH M + D+ + +ALVDMYAKCG ++EA+
Sbjct: 1072 CPSSVTISSLLPACTNVANLRHGKEIHGYAMVI-GVEKDVYVRSALVDMYAKCGYISEAK 1130
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F MP RN V+ S++ GYA +G E
Sbjct: 1131 ILFYMMPERNTVTWNSLIFGYA-------------------------------NHGYCNE 1159
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A+ LF ++ H TF +LNAC++ ++LG ++ R E +
Sbjct: 1160 AIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXK-MQEKYRI----EPRLEH 1214
Query: 429 GNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
++D+ + G + + + + M VE D W A++ C +G
Sbjct: 1215 YACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
Y F + L+ C ++LGR+ H VVK GL SD FV SLIDMY KCG V+
Sbjct: 114 QYVF-SALSFCGREGCVELGRRWHCFVVKIGLG------SDEFVCTSLIDMYAKCGEVDS 166
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R+++ M D + N +I A+NG+ +A +F ++ G +P+H T +L C
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
++EG++ + + K L+ ++ L + G ++EA+ + E++ Q + + W
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVG-NALLTLYSKCGMMEEAEIVFESL-RQRNIISW 283
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 34/222 (15%)
Query: 13 DLAFLDSS-PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
D F SS + LL +C ++ + +H + ++++++ L+D+YAKCG +
Sbjct: 1068 DQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYIS 1127
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A+ +F M +N TWNS+I G G+ ++A LF M E D
Sbjct: 1128 EAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT--------------- 1172
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGS 190
L +F + L+AC+ + ++G + + K R + +
Sbjct: 1173 ----------------KLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYA 1216
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNG 231
++D+ G+ G++S A + M E + W +L+ +G
Sbjct: 1217 CMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ + +C S++ T ++H+R+IKS S + + + LI+ Y +CG L
Sbjct: 420 YSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSL----------- 468
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++A ++F + + D SWNS++ ++Q+ +A+ K
Sbjct: 469 --------------------ENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRK 508
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCG 200
M E + +F + LSAC+ S + G + +++ + S ++D+ G+ G
Sbjct: 509 MIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAG 568
Query: 201 RVSCARRVFDGMRERNIVS-WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
++ A + + S W L+ N A V +++ +EP++ T+ +
Sbjct: 569 QLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKIL--DLEPNDATVYVTL 626
Query: 260 S 260
S
Sbjct: 627 S 627
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 335/547 (61%), Gaps = 11/547 (2%)
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYSSDVYMGSALID 194
L +V M + Y+F L A + + +G VHA + K + ++ S+L+
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62
Query: 195 MYGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
MY G + AR + D R V WN+LI+ + ++ + FV M+ +G+ P
Sbjct: 63 MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPT 122
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VT +V+SAC G+Q+H + + + DL +GNAL+DMYA+C +++ A +F
Sbjct: 123 PVTYITVLSACGKDKYIWLGMQVH-KCVVASGVLPDLKVGNALIDMYAECSEMDAAWELF 181
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ M +RN VS TS++SG+ + V AR +F M ER+ VSW A+I GY Q G+ EAL
Sbjct: 182 EGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALE 241
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+FR ++ V +T +++ ACA L L+ G A ++ +HG++ D FVGN+
Sbjct: 242 MFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKM------DTFVGNA 295
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KCGS++ +F+ M RD +W A+I+G A NG+G EA+ +F +ML E PD
Sbjct: 296 LVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPD 355
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT IGVL AC+HAGLV++GR +F SM+ +G+AP H+ C++DLLGRAG L EA I
Sbjct: 356 EVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETI 415
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
MPM+P++ IWG+LLAAC+VH N +G+ A+ LLE++ N Y+LLSN+YA+ RW
Sbjct: 416 GNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWE 475
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+V R+R+++ ++G+ K+PGCS IE+ G ++ F+ D+ HP++KEIY L + ++K G
Sbjct: 476 DVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAG 535
Query: 672 YVPNASD 678
YVP+ ++
Sbjct: 536 YVPDLTE 542
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 152/296 (51%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L +C + K + +VH ++ S ++ + N LID+YA+C + A ++F+ M
Sbjct: 126 YITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGME 185
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+N +W S+I+G L+ G +D A LF MPERD SW +M+ G+ Q +F EAL F +
Sbjct: 186 VRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFRE 245
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E++ S ++ACA + G +S+ D ++G+AL+DMY KCG
Sbjct: 246 MQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGS 305
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF M R+ +W ++I NG +A+ +F RM+ PDEVT V++A
Sbjct: 306 IQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTA 365
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
C +G + + +++ L+D+ + GKL EA MP+R
Sbjct: 366 CTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMR 421
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 192/488 (39%), Gaps = 109/488 (22%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P K + + +V D VHA ++K + + L+ +YA G AR + D
Sbjct: 23 PLLKAVTAAAERGAVGDA--VHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAW 80
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ T WN+++SG + +F + FV
Sbjct: 81 PARGGDT----------------------------PVVWNALISGHRRSRQFRLSCCSFV 112
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC- 199
M + ++ + LSAC +G QVH + S D+ +G+ALIDMY +C
Sbjct: 113 DMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECS 172
Query: 200 ------------------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G+V AR +FD M ER+ VSW ++I Y Q
Sbjct: 173 EMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQ 232
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +ALE+F M S + DE T+ SVV+ACA L A + G + R ++ D
Sbjct: 233 AGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSR-HGIKMDTF 291
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNALVDMY+KCG + +A VF M IR+ + T
Sbjct: 292 VGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWT-------------------------- 325
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
A+I G NG EEA+ +F + R P TF +L AC + + GR
Sbjct: 326 -----AVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDF-- 378
Query: 410 HVVKHGLRFLS-----GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAM 463
FLS G ++ LID+ + G +++ M R + W +
Sbjct: 379 --------FLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTL 430
Query: 464 IVGCAQNG 471
+ C +G
Sbjct: 431 LAACRVHG 438
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/719 (34%), Positives = 385/719 (53%), Gaps = 105/719 (14%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
L + P LL +C KS + +++H++IIK+ + F ++LI+ A
Sbjct: 29 LLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCA---------- 75
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ +G + A LF S+ + +Q WN+M+ G + A
Sbjct: 76 -------------------ISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGA 116
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ ++V+M + Y+F L +CA + G Q+H + K SD ++ ++LI+M
Sbjct: 117 IDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINM 176
Query: 196 YGKCGRVSCA-------------------------------RRVFDGMRERNIVSWNSLI 224
Y + G + A RR+F+ + R+ VSWN++I
Sbjct: 177 YAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMI 236
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G +AL F M + + P+E T+ +V+SACA + + G + + + L
Sbjct: 237 AGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS-WIEDHGL 295
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
++L L NAL+DMY+KCG L++A R +F
Sbjct: 296 GSNLRLVNALIDMYSKCGDLDKA-------------------------------RDLFEG 324
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+ E++++SWN +I GY+ +EAL LFR +++ +V P TF ++L ACA L L LG
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ H ++ K +FL + ++ SLIDMY KCG++E ++F M + SWNAMI
Sbjct: 385 KWIHAYIDK---KFLGLTNTSLWT--SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A +G+ AL LF++M G +PD +T +GVL ACSHAGLVE GR+ FSSM +++ +
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
+P HY CM+DLLGRAG DEA+ L++ M M+PD IWGSLL AC+VH N+ LGE+ AK
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
L E+EP N G YVLLSN+YA GRW +V R+R + +G+ K PGCS IE+ V+ F+
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 619
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
V DK H +++IY +L + + +++ G+VP+ S+ DE ++E + S+ + I F
Sbjct: 620 VGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAF 678
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 371/680 (54%), Gaps = 83/680 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A L+DS + +++HAR++ F+ +LI + G + AR+VFD
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +F WN+++ G+++++ F +AL +
Sbjct: 79 LPRPQIF-------------------------------PWNAIIRGYSRNNHFQDALLMY 107
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++F L AC+G +MG VHA + + + +DV++ + LI +Y KC
Sbjct: 108 SNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC 167
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
R+ AR VF+G+ ER IVSW ++++ Y QNG +ALE+F M ++PD V L S
Sbjct: 168 RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVS 227
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V++A L K+G IHA +++ ++ DL++ +L MYAKCG+
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQ------------- 272
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
V +A+++F KM N++ WNA+I+GY +NG EA+ +F +
Sbjct: 273 ------------------VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P + + ++ACA + L+ R + +V + R D+F+ ++LIDM+
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR------DDVFISSALIDMF 368
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGSVE +F+ ++RD V W+AMIVG +G EA+ L++ M G P+ VT +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L AC+H+G+V EG +F+ M+ +H + P + HY C++DLLGRAG LD+A +I+ MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QP +WG+LL+ACK HR++ LGEY A++L I+PSN+G YV LSN+YA W V V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+++G+ K GCSW+E+ G + F V DK HP +EI ++ + +K G+V N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 677 S------DDEAYEEQNGSNS 690
+DE EE S+S
Sbjct: 608 DASLHDLNDEEAEETLCSHS 627
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 57/437 (13%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+HS++F + S + + K Q+HA L ++ + LI G
Sbjct: 18 IHSDSF------YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR+VFD + I WN++I Y +N DAL ++ M + + PD T ++ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI--RNV 319
C+ L+ + G +HA++ R D+ + N L+ +YAKC +L AR VF+ +P+ R +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS T++VS YA QNGE EAL +F +++
Sbjct: 188 VSWTAIVSAYA-------------------------------QNGEPMEALEIFSHMRKM 216
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P ++LNA L DL+ GR H VVK GL E D+ + SL MY KC
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI----EPDLLI--SLNTMYAKC 270
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G V +F+ M + + WNAMI G A+NGY EA+ +F +M+ +PD +++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPM 556
AC+ G +E+ R SM + G + +D + ++D+ + G ++ A+ + + +
Sbjct: 331 SACAQVGSLEQAR----SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT-L 385
Query: 557 QPDAVIWGSLLAACKVH 573
D V+W +++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 214/459 (46%), Gaps = 78/459 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL +C + R VHA++ + F +++F+QN LI +YAKC L AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +PER SW ++VS +AQ+ EAL
Sbjct: 178 EGLP-----------------------------LPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + + S L+A D K G +HA + K + + +L MY
Sbjct: 209 IFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V+ A+ +FD M+ N++ WN++I+ Y +NG A +A+++F M+ + PD +++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + + ++ ++ + R + R+D+ + +AL+DM+AKCG + AR VFDR R
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV W+A+I GY +G EA+ L+R ++
Sbjct: 388 DVV-------------------------------VWSAMIVGYGLHGRAREAISLYRAME 416
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS-----L 432
R V P TF LL AC H+ +V+ G F + +
Sbjct: 417 RGGVHPNDVTFLGLLMAC-----------NHSGMVREGWWFFNLMADHKINPQQQHYACV 465
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQN 470
ID+ + G ++ + + M + V+ W A++ C ++
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/657 (37%), Positives = 376/657 (57%), Gaps = 32/657 (4%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
K + + +R+ V+D R+ A + + ++ N ++ Y+ G L A +F +
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTST----YNAMLAGYSANGRLPLAASLFRAIPRP 98
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+ +++N+++ L + DA LF MP RD ++N M+S A H S A YF +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLA 157
Query: 144 SENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
E A+S + L+A G V+ G L SR DV +AL+ Y + G+
Sbjct: 158 PEKDAVS---WNGMLAAYVRNGRVEEARG------LFNSRTEWDVISWNALMSGYVQWGK 208
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S AR +FD M R++VSWN +++ Y + G +A +F A+ + D T +VVS
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTAVVSG 264
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + G+ AR + + V NA+V Y + ++EA+ +F+ MP RNV S
Sbjct: 265 YA-----QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M++GYA+A ++ A+ +F M +++ VSW A++A Y+Q G +EE L LF + R
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
F +L+ CA++A L+ G Q H +++ +G FVGN+L+ MY KCG+
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIR------AGYGVGCFVGNALLAMYFKCGN 433
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ED FE M ERD VSWN MI G A++G+G EAL +F M KPD +T++GVL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+GLVE+G YF SM + G+ +HYTCM+DLLGRAG L EA L++ MP +PD+
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W + ++R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+RGV K PG SWIE+ V+ F D HP ++IY L+ L MK+ GYV +A+D
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV-SATD 669
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 176/375 (46%), Gaps = 34/375 (9%)
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
R +V + I + + GRV+ A R+F M R+ ++N+++ Y NG A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+ PD + +++ A A ++ + AR + E D V N ++ +A
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLAD-----ARGLFDEMPVRDSVTYNVMISSHAN 143
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G ++ AR FD P ++ VS M++ Y + V+ AR +F E +V+SWNAL++GY
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203
Query: 361 TQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q G+ EA LF R+ R+ V ++ +++ A D+ R+ F
Sbjct: 204 VQWGKMSEARELFDRMPGRDVV-----SWNIMVSGYARRGDMVEARRL----------FD 248
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ D+F +++ Y + G +E+ R+F+ M ER+ VSWNAM+ Q EA L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F M+ C TM L + AG++EE + F +M ++ ++ + M+
Sbjct: 309 F-NMMPCRNVASWNTM---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYS 359
Query: 540 RAGCLDEAKTLIEAM 554
+ GC +E L M
Sbjct: 360 QGGCSEETLQLFIEM 374
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 40/360 (11%)
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+L +++ N + + + G++ +A +F MP R+ + +M++GY+ + A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADL 401
+ + S+N L+ + +A GLF + R+SV T+ ++++ AN +
Sbjct: 93 RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLV 147
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
L R F E D N ++ Y++ G VE+ +F + E D +SWN
Sbjct: 148 SLARH----------YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
A++ G Q G +EA LF +M D V+ ++ + G + E R+ F +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSGYARRGDMVEARRLFDA---- 249
Query: 522 HGLAPLKDHYTCMVDLLGRA--GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
AP++D +T + G A G L+EA+ + +AMP + +AV W +++AA R M+
Sbjct: 250 ---APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRR--MMD 303
Query: 580 EYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E AK+L + P N + + YA+ G E V M ++ V SW +L
Sbjct: 304 E--AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV-----SWAAMLA 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+++ S FA +L +C ++ ++H R+I++ + F+ N L+ +Y KCG + AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
F++M ++V +WN++I G + GF +A +F M + D + +++ +
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 132 FSEALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + YF MH +F ++ Y+ L AG + + H L+ + D
Sbjct: 500 VEKGISYFYSMH-HDFGVTAKPEHYTCMIDLLGRAGRL-----AEAHDLMKDMPFEPDST 553
Query: 188 M-----GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
M G++ I + GR S A ++F+ + N + L Y +G DA ++ V
Sbjct: 554 MWGALLGASRIHRNPELGR-SAAEKIFE-LEPENAGMYVLLSNIYASSGKWRDARKMRVM 611
Query: 243 MMASGIE 249
M G++
Sbjct: 612 MEERGVK 618
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 352/660 (53%), Gaps = 69/660 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D F ++ +C + + R++H +IKS + + QN LI +Y +
Sbjct: 255 FPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTR--------- 305
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+G I AS +F + +D SW SM++GF Q EA
Sbjct: 306 ----------------------FGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEA 343
Query: 136 LGYFVKMHSENF-ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L F M + F +E+ FGS SAC ++ + G Q+H + +K +V+ G +L D
Sbjct: 344 LYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCD 403
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY K G + A R F + ++VSWN++I + +G ++A+ F +MM +G+ PD +T
Sbjct: 404 MYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGIT 463
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++ AC S +G QIH+ +++ L + + N+L+ MY KC L++A VF
Sbjct: 464 FLSLLCACGSPVTINQGTQIHSYIIKI-GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKD- 521
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
VSE + N+VSWNA+++ Q+ + E LF+
Sbjct: 522 -----VSENA------------------------NLVSWNAILSACLQHKQAGEVFRLFK 552
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
L+ P + T +L CA LA L++G Q H VK GL D+ V N LID
Sbjct: 553 LMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVV------DVSVSNRLID 606
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCGS++ +F + D VSW+++IVG AQ G G EAL LF+ M G +P+ VT
Sbjct: 607 MYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVT 666
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+GVL ACSH GLVEEG ++++M E G+ P ++H +CMVDLL RAGCL EA+ I+ M
Sbjct: 667 YLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM 726
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PD +W +LLA+CK H N+ + E A+ +L+++PSNS VLLSN++A +G W EV
Sbjct: 727 GFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVA 786
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R+R LM++ GV K PG SWI + ++VF +D H +IY +L+ L +M GY P
Sbjct: 787 RLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 228/464 (49%), Gaps = 47/464 (10%)
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSEN--FALSEYSFGSALSACAGSVDFKMGTQV 173
+ S NS ++ + + EAL F H +N L ++G+ + AC K G ++
Sbjct: 121 ELSTNSYINLMCKQRHYREALDTF-NFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKI 179
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H + KS D+ + + +++MYGKCG + AR+ FD M+ RN+VSW +I+ Y QNG
Sbjct: 180 HDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQE 239
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+DA+ ++++M+ SG PD +T S++ AC G Q+H +++ + L+ NA
Sbjct: 240 NDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIK-SGYDHHLIAQNA 298
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+ MY + G++ A VF + ++++S SM
Sbjct: 299 LISMYTRFGQIVHASDVFTMISTKDLISWASM---------------------------- 330
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVC-PTHYTFGNLLNACANLADLQLGRQAHTHVV 412
I G+TQ G EAL LFR + R+ P + FG++ +AC +L + + GRQ H
Sbjct: 331 ---ITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCA 387
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K GL ++F G SL DMY K G + R F + D VSWNA+I + +G
Sbjct: 388 KFGL------GRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGD 441
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EA+ F +M+ G PD +T + +LCAC + +G + S + K + K+
Sbjct: 442 VNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIK---IGLDKEAAV 498
Query: 533 C--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
C ++ + + L +A + + + + V W ++L+AC H+
Sbjct: 499 CNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHK 542
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 334/587 (56%), Gaps = 39/587 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS++ LK +D A ++F M ERD SWNS+++G+ + + L FV+M
Sbjct: 83 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ + S + CA S +G VH++ K+ +S + + L+DMY KCG + A+ V
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M +R++VS+ S+I Y + G A +A+++F M GI PD T+ +V++ CA
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 262
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
EG ++H ++ L D+ + NAL+DMYAKCG + E
Sbjct: 263 DEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQE---------------------- 299
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYT 387
A L+F++M ++++SWN +I GY++N EAL LF LL E P T
Sbjct: 300 ---------AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 350
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+L ACA+L+ GR+ H +++++G SD V NSL+DMY KCG++
Sbjct: 351 VACVLPACASLSAFDKGREIHGYIMRNGYF------SDRHVANSLVDMYAKCGALLLAHM 404
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ + +D VSW MI G +G+G EA+ LF +M G + D ++ + +L ACSH+GL
Sbjct: 405 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 464
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG ++F+ M E + P +HY C+VD+L R G L +A IE MP+ PDA IWG+LL
Sbjct: 465 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 524
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
C++H ++ L E VA+K+ E+EP N+G YVL++N+YAE +W +V R+RK + +RG+ K
Sbjct: 525 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 584
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
PGCSWIEI G VN+F+ D +P + I L+ + M GY P
Sbjct: 585 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 631
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 204/391 (52%), Gaps = 38/391 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + + C S+ +S R VH+ +K+ F+ E N L+D+Y+KCG L A+ V
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +MS+++V ++ S+I G + G +A +LF M E
Sbjct: 203 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------------------- 239
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
E + Y+ + L+ CA G +VH + ++ D+++ +AL+DMY
Sbjct: 240 --------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 291
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTL 255
KCG + A VF MR ++I+SWN++I Y +N A++AL +F ++ PDE T+
Sbjct: 292 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 351
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
A V+ ACASL+AF +G +IH +MR +D + N+LVDMYAKCG L A +FD +
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALG 371
+++VS T M++GY K A +F +M +E + +S+ +L+ + +G +E
Sbjct: 411 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 470
Query: 372 LFRLLKRE-SVCPTHYTFGNLLNACANLADL 401
F +++ E + PT + +++ A DL
Sbjct: 471 FFNIMRHECKIEPTVEHYACIVDMLARTGDL 501
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 32/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L+ C R + + + +RVH I ++ +IF+ N L+D+YAKCG + A VF
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 304
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M K++ +WN+II G K + ++A LF + E +
Sbjct: 305 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR--------------------- 343
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F+ E + L ACA F G ++H + ++ Y SD ++ ++L+DMY
Sbjct: 344 ---------FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 394
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +FD + +++VSW +I Y +G +A+ +F +M +GIE DE++ S
Sbjct: 395 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 454
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC+ EG + +MR E K+ + +VDM A+ G L +A + MPI
Sbjct: 455 LLYACSHSGLVDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPI 513
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 196/438 (44%), Gaps = 84/438 (19%)
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD ++ + WN L+ ++G S ++ +F +MM+SG+E D T + V + +SL +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G Q+H +++ + V GN+LV Y K +++ AR VFD M R+V+S S+++G
Sbjct: 61 HGGEQLHGFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 119
Query: 329 YAKASSVKSARLMFTKML-------------------ERNVVSW---------------- 353
Y + +F +ML + ++S
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 354 ----NALIAGYTQNGENEEALGLFRLL-------------------------------KR 378
N L+ Y++ G+ + A +FR + +
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E + P YT +LN CA L G++ H + ++ L F DIFV N+L+DMY K
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF------DIFVSNALMDMYAK 293
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTM 495
CGS+++ +F M +D +SWN +I G ++N Y EAL LF LL EK PD T+
Sbjct: 294 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTV 351
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
VL AC+ ++GR+ + + +G + +VD+ + G L A L + +
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 556 MQPDAVIWGSLLAACKVH 573
D V W ++A +H
Sbjct: 411 -SKDLVSWTVMIAGYGMH 427
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/703 (33%), Positives = 374/703 (53%), Gaps = 63/703 (8%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ + + ++++ R+VHA+ I + N+LI Y+ L A +FD M ++
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 86 FTWNSIITGLLKWG---------------------------------------------- 99
+W+ ++ G K G
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204
Query: 100 ---FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
I+DA LF M ERD +W M+ G+A+ + +E+L F KM E + + +
Sbjct: 205 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 264
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+ ACA + + + ++ DV +G+A+IDMY KCG V AR +FD M E+N
Sbjct: 265 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 324
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
++SW+++I Y +G AL++F M++SG+ PD++TLAS++ AC + + Q+HA
Sbjct: 325 VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHA 384
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ L+N L++ N LV Y+ L++A +FD M +R+ VS + MV G+AK
Sbjct: 385 QASVHGMLQN-LIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYM 443
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQN--GENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
+ F R ++ A YT G E+L LF ++ E V P ++ A
Sbjct: 444 NCFGTF-----RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
CA L + R ++ + + D+ +G ++IDM+ KCG VE IF+ M E
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQL------DVILGTAMIDMHAKCGCVESAREIFDRMEE 552
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
++ +SW+AMI +G G +AL LF ML G P+ +T++ +L ACSHAGLVEEG ++
Sbjct: 553 KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRF 612
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
FS M +++ + HYTC+VDLLGRAG LDEA LIE+M ++ D +WG+ L AC+ H+
Sbjct: 613 FSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHK 672
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
+++L E A LLE++P N G Y+LLSN+YA GRW +V + R LM +R + K PG +WI
Sbjct: 673 DVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 732
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
E+ + F V D HP +KEIY +LK L +++ VGYVP+ +
Sbjct: 733 EVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 775
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 213/485 (43%), Gaps = 109/485 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ +C + ++ R + I + +F ++ + +ID+YAKCGC+ AR++F
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M KNV SW++M++ + H + +AL
Sbjct: 318 DRMEEKNVI-------------------------------SWSAMIAAYGYHGQGRKALD 346
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S + + S L AC + QVHA S ++ + + L+ Y
Sbjct: 347 LFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYS 406
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP------------------------- 232
+ A +FDGM R+ VSW+ ++ + + G
Sbjct: 407 YYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPF 466
Query: 233 ---ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
A+++L +F +M G+ PD+V + +VV ACA L A + I + R +K + D++
Sbjct: 467 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR-KKFQLDVI 525
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
LG A++DM+AKCG + AR +FDRM +NV+S ++M++ Y
Sbjct: 526 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAY-------------------- 565
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
GY +G+ +AL LF ++ R + P T +LL AC +H
Sbjct: 566 ---------GY--HGQGRKALDLFPMMLRSGILPNKITLVSLLYAC-----------SHA 603
Query: 410 HVVKHGLRFLS------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
+V+ GLRF S +D+ ++D+ + G +++ ++ E+M VE+D W A
Sbjct: 604 GLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGA 663
Query: 463 MIVGC 467
+ C
Sbjct: 664 FLGAC 668
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/657 (35%), Positives = 347/657 (52%), Gaps = 81/657 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC SK V ++ A+II + F +I +L+ + A + AR++FD++
Sbjct: 41 FISLLQSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ N+ WNSM G+AQ + + E + F +
Sbjct: 98 DPNI-------------------------------ALWNSMFRGYAQSESYREVVFLFFQ 126
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + ++F L +C G QVH L K + + ++G+ LIDMY G
Sbjct: 127 MKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGT 186
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A ++F M ERN+V+W S+I Y + A +VSA
Sbjct: 187 VGDAYKIFCEMFERNVVAWTSMINGY-------------------------ILSADLVSA 221
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
RL R D+VL N +V Y + G + EAR +F MP R+V+
Sbjct: 222 --------------RRLFDLAPER-DVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMF 266
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES 380
+++ GYA +V++ +F +M ERN+ SWNALI GY NG E LG F R+L
Sbjct: 267 WNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESD 326
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P T +L+ACA L L LG+ H + GL+ +++VGN+L+DMY KCG
Sbjct: 327 VPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLK------GNVYVGNALMDMYAKCG 380
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+E+ +F M +D +SWN +I G A + G +AL LF +M G+KPD +T IG+LC
Sbjct: 381 IIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILC 440
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+H GLVE+G YF SM+ ++ + P +HY CMVD+L RAG L++A + MP++ D
Sbjct: 441 ACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADG 500
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW LL AC++++N+ L E ++L+E+EP N YV+LSN+Y + GRW +V R++ M
Sbjct: 501 VIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAM 560
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R G K PGCS IE+ V F D+RHP +EIY VL+ L + ++ GYVP+ +
Sbjct: 561 RDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPDLT 617
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 324/525 (61%), Gaps = 40/525 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ L C + G VHA L S + + + + + +++MY KCG + ARR+FD M
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+++V+W +LI + QN DAL +F +M+ G++P+ TL+S++ A S G
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGT 209
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA ++ ++ + +G+ALVDMYA+CG ++
Sbjct: 210 QLHAFCLK-YGYQSSVYVGSALVDMYARCGHMD--------------------------- 241
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+A+L F M ++ VSWNALI+G+ + GE E AL L ++R++ PTH+T+ ++
Sbjct: 242 ----AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVF 297
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ACA++ L+ G+ H H++K GL+ ++ F+GN+L+DMY K GS++D R+F+ +
Sbjct: 298 SACASIGALEQGKWVHAHMIKSGLKLIA------FIGNTLLDMYAKAGSIDDAKRVFDRL 351
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
V+ D VSWN M+ GCAQ+G G E L F++ML G +P+ ++ + VL ACSH+GL++EG
Sbjct: 352 VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL 411
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF M K++ + P HY VDLLGR G LD A+ I MP++P A +WG+LL AC++
Sbjct: 412 YYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRM 470
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H+N+ LG Y A++ E++P +SGP +LLSN+YA GRW +V +VRK+M++ GV KQP CS
Sbjct: 471 HKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
W+EI V++F+ D+ HP KEI + ++ ++K +GYVP+ S
Sbjct: 531 WVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTS 575
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 205/383 (53%), Gaps = 40/383 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCGCLYGARKV 76
D + ++KLL C R V R VHA ++ S F + + +QN ++++YAKCGCL
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCL------ 139
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DDA R+F MP +D +W ++++GF+Q++R +AL
Sbjct: 140 -------------------------DDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDAL 174
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + ++ S L A GTQ+HA K Y S VY+GSAL+DMY
Sbjct: 175 LLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMY 234
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG + A+ FDGM ++ VSWN+LI+ + + G AL + +M +P T +
Sbjct: 235 ARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYS 294
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV SACAS+ A ++G +HA +++ L+ +GN L+DMYAK G +++A+ VFDR+
Sbjct: 295 SVFSACASIGALEQGKWVHAHMIK-SGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVK 353
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVSWNALIAGYTQNGENEEALGL 372
+VVS +M++G A+ K F +ML E N +S+ ++ + +G +E L
Sbjct: 354 PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYY 413
Query: 373 FRLLKRESVCP--THY-TFGNLL 392
F L+K+ V P HY TF +LL
Sbjct: 414 FELMKKYKVEPDVPHYVTFVDLL 436
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 167/324 (51%), Gaps = 39/324 (12%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD + ++ C L ++G +HA L+ L N LVL N +V+MYAKCG L++AR
Sbjct: 85 PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+FD MP +++V+ T++++G+++ + + A L+F +ML
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML----------------------- 181
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
R + P H+T +LL A + L G Q H +K+G +S ++VG
Sbjct: 182 --------RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY------QSSVYVG 227
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
++L+DMY +CG ++ F+ M + VSWNA+I G A+ G G AL L KM +
Sbjct: 228 SALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQ 287
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P H T V AC+ G +E+G+ + M K GL + ++D+ +AG +D+AK
Sbjct: 288 PTHFTYSSVFSACASIGALEQGKWVHAHMIKS-GLKLIAFIGNTLLDMYAKAGSIDDAKR 346
Query: 550 LIEAMPMQPDAVIWGSLLAACKVH 573
+ + + ++PD V W ++L C H
Sbjct: 347 VFDRL-VKPDVVSWNTMLTGCAQH 369
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 32/204 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ + +C ++ + VHA +IKS FI N L+D+YAK G
Sbjct: 293 YSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS------------ 340
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
IDDA R+F + + D SWN+M++G AQH E L F +
Sbjct: 341 -------------------IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQ 381
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E SF L+AC+ S G L+ K + DV +D+ G+ G
Sbjct: 382 MLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGL 441
Query: 202 VSCARRVFDGMR-ERNIVSWNSLI 224
+ A R M E W +L+
Sbjct: 442 LDRAERFIREMPIEPTAAVWGALL 465
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/661 (34%), Positives = 366/661 (55%), Gaps = 70/661 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +SV++ +VH ++K + S + + N L+D Y K L
Sbjct: 138 DHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL------- 190
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
GL A LF M E+D ++N++++G+++ +A+
Sbjct: 191 ----------------GL--------ACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAIN 226
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM F SE++F + L+A D + G QVH+ + K + +V++ +AL+D Y
Sbjct: 227 LFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYS 286
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K R+ AR++F M E + +S+N LITC NG ++LE+F + + + + A+
Sbjct: 287 KHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFAT 346
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S A+ + G QIH++ + + + +++++GN+LVDMYAKC K E
Sbjct: 347 LLSIAANSLNLEMGRQIHSQAIVTDAI-SEVLVGNSLVDMYAKCDKFGE----------- 394
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A +F + ++ V W ALI+GY Q G +E+ L LF +
Sbjct: 395 --------------------ANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMH 434
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + T+ ++L ACANLA L LG+Q H+ +++ SG S++F G++L+DMY
Sbjct: 435 RAKIGADSATYASILRACANLASLTLGKQLHSRIIR------SGCLSNVFSGSALVDMYA 488
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+++ ++F+ M R+ VSWNA+I AQNG G AL F++M+ G +P+ V+ +
Sbjct: 489 KCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLS 548
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+LCACSH GLVEEG +YF+SM++ + L P ++HY MVD+L R+G DEA+ L+ MP +
Sbjct: 549 ILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFE 608
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRV 616
PD ++W S+L +C++H+N L A +L ++ ++ PYV +SN+YA G W V +V
Sbjct: 609 PDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKV 668
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+K +R+RG+ K P SW+EI +VF D HP KEI L L ++M+ GY P++
Sbjct: 669 KKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDS 728
Query: 677 S 677
+
Sbjct: 729 T 729
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 268/555 (48%), Gaps = 50/555 (9%)
Query: 25 LLDSCLRSKSVSDT----------RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L+ SC R + + + V A +IK+ F N + + + G L AR
Sbjct: 3 LIKSCTRKTHLHNLGTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAAR 62
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K+FD+M +KNV + N++I G LK G + A LF SM +R +W ++ G+AQH+RF E
Sbjct: 63 KLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLE 122
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A F M + + LS QVH + K Y S + + ++L+D
Sbjct: 123 AFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLD 182
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K + A +F M E++ V++N+L+T Y + G DA+ +F +M G P E T
Sbjct: 183 SYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFT 242
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
A+V++A + + G Q+H+ +++C + N V NAL+D Y+K ++ EAR +F M
Sbjct: 243 FAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFV-ANALLDFYSKHDRIVEARKLFYEM 301
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P E + +S+N LI NG EE+L LFR
Sbjct: 302 P-------------------------------EVDGISYNVLITCCAWNGRVEESLELFR 330
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
L+ + F LL+ AN +L++GRQ H+ + ++ S++ VGNSL+D
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAI------VTDAISEVLVGNSLVD 384
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KC + RIF + + V W A+I G Q G + L LF +M D T
Sbjct: 385 MYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+L AC++ + G++ S + + L+ + + +VD+ + G + EA + + M
Sbjct: 445 YASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG-SALVDMYAKCGSIKEALQMFQEM 503
Query: 555 PMQPDAVIWGSLLAA 569
P++ ++V W +L++A
Sbjct: 504 PVR-NSVSWNALISA 517
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 144/279 (51%), Gaps = 8/279 (2%)
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N V + + G L AR +FD MP +NV+S +M+ GY K+ ++ +AR +F M++R+VV
Sbjct: 46 NFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
+W LI GY Q+ EA LF + R + P H T LL+ + Q H HV
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK G +S + V NSL+D Y K S+ C +F+ M E+D V++NA++ G ++ G
Sbjct: 166 VK------VGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEG 219
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ +A+ LF KM G +P T VL A +E G++ S + K + + +
Sbjct: 220 FNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFV-A 278
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
++D + + EA+ L MP + D + + L+ C
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCC 316
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 329/580 (56%), Gaps = 43/580 (7%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D A LF +PE+D ++N++++G+ + ++E++ F+KM S+++F L A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
G DF +G Q+HAL + +S D +G+ ++D Y K RV R +FD M E + VS+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH--ARL 278
N +I+ Y Q +L F M G + A+++S A+L++ + G Q+H A L
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ + L +GN+LVDMYAKC E A
Sbjct: 380 ATADSI---LHVGNSLVDMYAKCEMFEE-------------------------------A 405
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
L+F + +R VSW ALI+GY Q G + L LF ++ ++ TF +L A A+
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L LG+Q H +++ SG ++F G+ L+DMY KCGS++D ++FE M +R+ V
Sbjct: 466 ASLLLGKQLHAFIIR------SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I A NG G A+G F KM+ G +PD V+++GVL ACSH G VE+G +YF +M
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
S +G+ P K HY CM+DLLGR G EA+ L++ MP +PD ++W S+L AC++H+N L
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 579 GEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
E A+KL +E ++ YV +SN+YA G W +V V+K MR+RG+ K P SW+E+
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++VF D+ HP EI + LT E++R GY P+ S
Sbjct: 700 HKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 277/537 (51%), Gaps = 44/537 (8%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
DTRRV ARIIK+ F ++ N +++ + G + ARKV+D+M +KN + N++I+G +
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEY-SF 154
K G + A LF +MP+R +W ++ +A++ F EA F +M S + L ++ +F
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM--GSALIDMYGKCGRVSCARRVFDGM 212
+ L C +V QVHA K + ++ ++ + L+ Y + R+ A +F+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E++ V++N+LIT YE++G ++++ +F++M SG +P + T + V+ A L F G
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA L D +GN ++D Y+K ++ E R +FD MP + VS
Sbjct: 271 QLHA-LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS----------- 318
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
NVV I+ Y+Q + E +L FR ++ ++ F +L
Sbjct: 319 ---------------YNVV-----ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ ANL+ LQ+GRQ H + L+ +S + VGNSL+DMY KC E+ IF+++
Sbjct: 359 SIAANLSSLQMGRQLHCQAL------LATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
+R VSW A+I G Q G L LF KM + D T VL A + + G+
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + + L + + +VD+ + G + +A + E MP + +AV W +L++A
Sbjct: 473 QLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 222/526 (42%), Gaps = 123/526 (23%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++HA + + F+ + + N+++D Y+K + R +FD+M
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM------------------ 311
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
PE D S+N ++S ++Q D++ +L +F +M F + F + L
Sbjct: 312 -------------PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 159 SACAGSVDFKMGTQVH--ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
S A +MG Q+H ALL+ + S +++G++L+DMY KC A +F + +R
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATA--DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
VSW +LI+ Y Q G L++F +M S + D+ T A+V+ A AS A+ G Q+HA
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
++R L N + G+ LVDMYAKCG + +A VF+ MP RN VS +++S +A
Sbjct: 477 FIIRSGNLEN-VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA------ 529
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
NG+ E A+G F + + P + +L AC+
Sbjct: 530 -------------------------DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM---- 452
+ CG VE G F+ M
Sbjct: 565 H-----------------------------------------CGFVEQGTEYFQAMSPIY 583
Query: 453 -VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC---SHAGLV 508
+ + M+ +NG EA L +M +PD + VL AC + L
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF---EPDEIMWSSVLNACRIHKNQSLA 640
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
E + SM K A Y M ++ AG ++ + + +AM
Sbjct: 641 ERAAEKLFSMEKLRDAAA----YVSMSNIYAAAGEWEKVRDVKKAM 682
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 31/296 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA +L S+ R++H + + + S + + N L+D+YAKC
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE------------ 400
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++A +F S+P+R SW +++SG+ Q L F
Sbjct: 401 -------------------MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM N + +F + L A A +G Q+HA + +S +V+ GS L+DMY KCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF+ M +RN VSWN+LI+ + NG A+ F +M+ SG++PD V++ V++
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ ++G + + + ++D+ + G+ EA + D MP
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S A F + ++ AR+++ D N +V+ + G+++ AR V+D MP +N VS
Sbjct: 25 SPATFLDTRRVDARIIKT-GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC- 382
+M+SG+ K V SAR +F M +R VV+W L+ Y +N +EA LFR + R S C
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 383 -PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF--VGNSLIDMYMKC 439
P H TF LL C + Q H VK G +++ F V N L+ Y +
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGF------DTNPFLTVSNVLLKSYCEV 197
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ C +FE + E+D V++N +I G ++G TE++ LF KM G +P T GVL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 500 CA 501
A
Sbjct: 258 KA 259
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 79/309 (25%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S FA +L + S+ +++HA II+S +F + L+D+YAKCG + A +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++N +WN++I S A + A+G
Sbjct: 511 EEMPDRNAVSWNALI-------------------------------SAHADNGDGEAAIG 539
Query: 138 YFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMGS 190
F KM S L+AC+ G+ F+ + ++ + K ++ +
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY------A 593
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++D+ G+ GR + A ++ D M EP
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEM----------------------------------PFEP 619
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DE+ +SV++AC + +L EKLR D ++ ++YA G+ + R V
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR-DAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 311 FDRMPIRNV 319
M R +
Sbjct: 679 KKAMRERGI 687
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/659 (34%), Positives = 354/659 (53%), Gaps = 70/659 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS F+ + S +SV+ ++H I+KS F + N L+ Y
Sbjct: 193 MDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFY------------ 240
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
LK +D A ++F M ERD SWNS+++G+ + + L
Sbjct: 241 -------------------LKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M + + S + CA S +G VH K+ +S + + L+DMY
Sbjct: 282 SVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMY 341
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A+ VF M R++VS+ S+I Y + G A +A+++F M GI PD T+
Sbjct: 342 SKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V++ CA EG ++H ++ + D+ + NAL+DMYAKCG
Sbjct: 402 AVLNCCARNRLLDEGKRVH-EWIKENDMGFDIFVSNALMDMYAKCG-------------- 446
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
S++ A L+F++M ++++SWN +I GY++N EAL LF LL
Sbjct: 447 -----------------SMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLL 489
Query: 377 KRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
E P T +L ACA+L+ GR+ H +++++G SD V NSL+DM
Sbjct: 490 LVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF------SDRHVANSLVDM 543
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG++ +F+ + +D VSW MI G +G+G EA+ LF +M G +PD ++
Sbjct: 544 YAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISF 603
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSH+GLV+EG ++F+ M E + P +HY C+VD+L R G L +A IE MP
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMP 663
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ PDA IWG+LL C++H ++ L E VA+K+ E+EP N+G YVL++N+YAE +W EV R
Sbjct: 664 IPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKR 723
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+RK + +RG+ K PGCSWIEI G VN+F+ D +P ++I L+ + M GY P
Sbjct: 724 LRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSP 782
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/657 (37%), Positives = 376/657 (57%), Gaps = 32/657 (4%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
K + + +R+ V+D R+ A + + ++ N ++ Y+ G L A +F +
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTST----YNAMLAGYSANGRLPLAASLFRAIPRP 98
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+ +++N+++ L + DA LF MP RD ++N M+S A H S A YF +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLA 157
Query: 144 SENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
E A+S + L+A G V+ G L SR DV +AL+ Y + G+
Sbjct: 158 PEKDAVS---WNGMLAAYVRNGRVEEARG------LFNSRTEWDVISWNALMSGYVQWGK 208
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S AR +FD M R++VSWN +++ Y + G +A +F A+ + D T +VVS
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTAVVSG 264
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + G+ AR + + V NA+V Y + ++EA+ +F+ MP RNV S
Sbjct: 265 YA-----QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M++GYA+A ++ A+ +F M +++ VSW A++A Y+Q G +EE L LF + R
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
F +L+ CA++A L+ G Q H +++ +G FVGN+L+ MY KCG+
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIR------AGYGVGCFVGNALLAMYFKCGN 433
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ED FE M ERD VSWN MI G A++G+G EAL +F M KPD +T++GVL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+GLVE+G YF SM + G+ +HYTCM+DLLGRAG L EA L++ MP +PD+
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W + ++R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+RGV K PG SWIE+ V+ F D HP ++IY L+ L MK+ GYV +A+D
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV-SATD 669
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 176/375 (46%), Gaps = 34/375 (9%)
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
R +V + I + + GRV+ A R+F M R+ ++N+++ Y NG A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+ PD + +++ A A ++ + AR + E D V N ++ +A
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLAD-----ARGLFDEMPVRDSVTYNVMISSHAN 143
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G ++ AR FD P ++ VS M++ Y + V+ AR +F E +V+SWNAL++GY
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGY 203
Query: 361 TQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q G+ EA LF R+ R+ V ++ +++ A D+ R+ F
Sbjct: 204 VQWGKMSEARELFDRMPGRDVV-----SWNIMVSGYARRGDMVEARRL----------FD 248
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ D+F +++ Y + G +E+ R+F+ M ER+ VSWNAM+ Q EA L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F M+ C TM L + AG++EE + F +M ++ ++ + M+
Sbjct: 309 F-NMMPCRNVASWNTM---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYS 359
Query: 540 RAGCLDEAKTLIEAM 554
+ GC +E L M
Sbjct: 360 QGGCSEETLQLFIEM 374
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 40/360 (11%)
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+L +++ N + + + G++ +A +F MP R+ + +M++GY+ + A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADL 401
+ + S+N L+ + +A GLF + R+SV T+ ++++ AN +
Sbjct: 93 RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLV 147
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
L R F E D N ++ Y++ G VE+ +F + E D +SWN
Sbjct: 148 SLARH----------YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWN 197
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
A++ G Q G +EA LF +M D V+ ++ + G + E R+ F +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSGYARRGDMVEARRLFDA---- 249
Query: 522 HGLAPLKDHYTCMVDLLGRA--GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
AP++D +T + G A G L+EA+ + +AMP + +AV W +++AA R M+
Sbjct: 250 ---APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRR--MMD 303
Query: 580 EYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E AK+L + P N + + YA+ G E V M ++ V SW +L
Sbjct: 304 E--AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV-----SWAAMLA 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 23/286 (8%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+++ S FA +L +C ++ ++H R+I++ + F+ N L+ +Y KCG + AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
F++M ++V +WN++I G + GF +A +F M + D + +++ +
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 132 FSEALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + YF MH +F ++ Y+ L AG + + H L+ + D
Sbjct: 500 VEKGISYFYSMH-HDFGVTAKPEHYTCMIDLLGRAGRL-----AEAHDLMKDMPFEPDST 553
Query: 188 M-----GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
M G++ I + GR S A ++F+ + N + L Y +G DA ++ V
Sbjct: 554 MWGALLGASRIHRNPELGR-SAAEKIFE-LEPENAGMYVLLSNIYASSGKWRDARKMRVM 611
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
M G++ +V S + + F G +H + DL
Sbjct: 612 MEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/681 (33%), Positives = 368/681 (54%), Gaps = 63/681 (9%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARI-IKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ P ++ +C K++ + +HAR+ I+S AS F+ N+L+ +Y++ G A KVF
Sbjct: 2 NPPILHIIHNC---KTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVF 58
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+++ N + W S++ G+ ++ ++ EA
Sbjct: 59 DEITQPNAYL-------------------------------WTSLIHGYVENRQYDEAFS 87
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M E ++ ++ S L A A FK G V+ + K ++ D+ + ++++D++
Sbjct: 88 LFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFM 147
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP------- 250
+C +V AR+ FD M E++IVSWN +I+ Y N A + F RM +
Sbjct: 148 RCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICG 207
Query: 251 --------------DEVTLASVVSACASLAAFKE-GLQIHARLMRCEKLRNDLVLGNALV 295
D + + + S ++ + + G ++AR++ + +D N ++
Sbjct: 208 YVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMI 267
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
+ K G+L A+ FDRMP +NV+S M+ GY K AR +F +M +N+V+W+
Sbjct: 268 SGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWST 327
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+I GY +NG+ +AL LF K + + P +++AC+ L + + V
Sbjct: 328 MIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPS 387
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
L SD+ V SLIDMY KCGS+E ++FE +D + ++ MI A +G G +
Sbjct: 388 LL------SDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRD 441
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
A+ LF KM KPD VT +GVL AC+H GLV+EGRKYF M++E G+ P + HY C+V
Sbjct: 442 AIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVV 501
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
DLLGR GCL+EA LI MP+ P +V+WG+LLAAC+VH N+ L E A +L +IEP NSG
Sbjct: 502 DLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSG 561
Query: 596 PYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKE 655
Y+LLSN+YA GRWG V +VR +R+ V K G SWIE+ V+ F++ D H +
Sbjct: 562 NYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDS 621
Query: 656 IYLVLKMLTREMKRVGYVPNA 676
I L+L +L +MK GY+ ++
Sbjct: 622 ISLILYLLCEDMKLSGYLIDS 642
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/524 (38%), Positives = 325/524 (62%), Gaps = 39/524 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ L+ C K G +HA + S + D+ + + +++MY KCG + A+ +FD M
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+++VSW LI+ Y Q+G AS+AL +F +M+ G +P+E TL+S++ A + + G Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+HA ++ N + +G++L+DMYA+ + E
Sbjct: 228 LHAFSLKYGYDMN-VHVGSSLLDMYARWAHMRE--------------------------- 259
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A+++F + +NVVSWNALIAG+ + GE E + LF + R+ PTH+T+ ++
Sbjct: 260 ----AKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+ L+ G+ H HV+K SG + ++GN+LIDMY K GS++D ++F +V
Sbjct: 316 ACASSGSLEQGKWVHAHVIK------SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV 369
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++D VSWN++I G AQ+G G EAL LF++ML +P+ +T + VL ACSH+GL++EG+
Sbjct: 370 KQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQY 429
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M K+H + H+ +VDLLGRAG L+EA IE MP++P A +WG+LL +C++H
Sbjct: 430 YFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMH 488
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N+ LG Y A+++ E++P +SGP+VLLSN+YA GR + +VRK+M++ GV K+P CSW
Sbjct: 489 KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSW 548
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI V+VF+ D HP+ +EI + + ++ ++K +GYVP+ S
Sbjct: 549 VEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 592
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 215/447 (48%), Gaps = 70/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++K+L+ C + + R +HA I S F ++ + N ++++YAKCG L
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL----------- 156
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++A LF MP +D SW ++SG++Q + SEAL F K
Sbjct: 157 --------------------EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F +E++ S L A G Q+HA K Y +V++GS+L+DMY +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A+ +F+ + +N+VSWN+LI + + G + +F++M+ G EP T +SV +A
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTA 316
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS + ++G +HA +++ + +GN L+DMYAK G + +A+ VF R+ +++VS
Sbjct: 317 CASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 375
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S++SGYA Q+G EAL LF + + V
Sbjct: 376 WNSIISGYA-------------------------------QHGLGAEALQLFEQMLKAKV 404
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF ++L AC++ L G+ + KH + E+ + +++D+ + G
Sbjct: 405 QPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKI------EAQVAHHVTVVDLLGRAGR 458
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGC 467
+ + + E M ++ W A++ C
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSC 485
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 163/326 (50%), Gaps = 40/326 (12%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EP+ + +++ C L K+G IHA + + +DLVL N +++MYAKCG L EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ +FD+MP +++VS T ++SGY+++ G+
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQS-------------------------------GQAS 188
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EAL LF + P +T +LL A GRQ H +K+G + ++
Sbjct: 189 EALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY------DMNVH 242
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VG+SL+DMY + + + IF ++ ++ VSWNA+I G A+ G G + LF +ML G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQG 302
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+P H T V AC+ +G +E+G+ + + K G P+ ++D+ ++G + +A
Sbjct: 303 FEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDA 361
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVH 573
K + + Q D V W S+++ H
Sbjct: 362 KKVFRRLVKQ-DIVSWNSIISGYAQH 386
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
S+ P + +LN C L L+ GR H H+ S E D+ + N +++MY KC
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQS------STFEDDLVLLNFILNMYAKC 153
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+E+ +F+ M +D VSW +I G +Q+G +EAL LF KML G +P+ T+ +L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
A GR+ + S ++G + ++D+ R + EAK + ++ + +
Sbjct: 214 KASGTGPSDHHGRQ-LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-N 271
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEI-----EPSN 593
V W +L+A H GE+V + L++ EP++
Sbjct: 272 VVSWNALIAG---HARKGEGEHVMRLFLQMLRQGFEPTH 307
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/653 (36%), Positives = 349/653 (53%), Gaps = 79/653 (12%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+ HA IK+ ++F+ + LI++Y K GC+
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCML---------------------------- 165
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
DA ++F ++PER+ SW +++SG+A EA F M E A ++ + S LS
Sbjct: 166 ---DARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLS 222
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A G Q+H L K+ S +G+AL+ MYGKCG + A + F+ +++ ++
Sbjct: 223 ALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDIT 282
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W+++IT Y Q G + +AL +F M +G +P E T V++AC+ + A +EG QIH +
Sbjct: 283 WSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSL 342
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ + ALVDMYA K S+ AR
Sbjct: 343 KA-GYECQIYFMTALVDMYA-------------------------------KCGSLVDAR 370
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F + E ++V W ++I+GY QNGENE AL L+ ++ E + P T ++L AC++LA
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L+ G+Q H +K+G ++ +G++L MY KCGS+EDG +F M RD ++
Sbjct: 431 ALEQGKQIHAQTIKYGFSL------EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMT 484
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNAMI G +QNG G +AL LF+++ KPD+VT + VL ACSH GLVE G+ YF M
Sbjct: 485 WNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMML 544
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
E G+ P +HY CMVD+L RAG L E K IE+ + +W LL AC+ +RN LG
Sbjct: 545 DEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELG 604
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
Y +KL+E+ S Y+LLS++Y LGR +V RVR+LM+ RGV K+PGCSWIE+
Sbjct: 605 AYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQ 664
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQNGSNSTS 692
V+VF+V D+ HP +I L+ L MK DE YE N +NS +
Sbjct: 665 VHVFVVGDQIHPQIVKICSELRRLRDHMK----------DECYESFNDTNSMT 707
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 272/554 (49%), Gaps = 81/554 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C R K + + +HA+++++ S +++ N L+++YAKCG + A+ V
Sbjct: 13 FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV----- 67
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR--FSEALGYF 139
F S+ +D SWN +++G++Q +S + F
Sbjct: 68 --------------------------FESITNKDVVSWNCLINGYSQKGTVGYSFVMELF 101
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M +EN + ++F +A + S + G Q HAL K+ DV++GS+LI+MY K
Sbjct: 102 QRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKI 161
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VFD + ERN VSW ++I+ Y A +A E+F M D+ SV+
Sbjct: 162 GCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVL 221
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLV----LGNALVDMYAKCGKLNEARCVFDRMP 315
SA G QIH C L+N L+ +GNALV MY KCG L++A F+
Sbjct: 222 SALTVPDLVHYGKQIH-----CLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSG 276
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++ ++ ++M++GYA+A G++ EAL LF
Sbjct: 277 DKDDITWSAMITGYAQA-------------------------------GDSHEALNLFYN 305
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P+ +TF ++NAC+++ L+ G+Q H + +K +G E I+ +L+DM
Sbjct: 306 MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLK------AGYECQIYFMTALVDM 359
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+ D + F+ + E D V W +MI G AQNG AL L+ +M + P +TM
Sbjct: 360 YAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTM 419
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
VL ACS +E+G++ + K +G + + + + + G L++ + MP
Sbjct: 420 ASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478
Query: 556 MQPDAVIWGSLLAA 569
+ D + W ++++
Sbjct: 479 SR-DIMTWNAMISG 491
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 219/426 (51%), Gaps = 56/426 (13%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
SF L C D + G +HA L ++ S VY+ ++L+++Y KCG + A+ VF+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 213 RERNIVSWNSLITCYEQNGPA--SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+++VSWN LI Y Q G S +E+F RM A P+ T + V +A +S
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
GLQ HA ++ D+ +G++L++MY K G + +AR VFD +P RN VS +++SGYA
Sbjct: 132 GLQAHALAIKTSNFY-DVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYA 190
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
R+ F EA LF L++RE + + +
Sbjct: 191 M------ERMAF-------------------------EAWELFXLMRREEGAHDKFIYTS 219
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+A + G+Q H +K+GL ++ VGN+L+ MY KCG ++D + FE
Sbjct: 220 VLSALTVPDLVHYGKQIHCLALKNGLLSIAS------VGNALVTMYGKCGCLDDALKTFE 273
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
++D ++W+AMI G AQ G EAL LF M L G KP T +GV+ ACS G +EE
Sbjct: 274 LSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEE 333
Query: 511 GRKYFSSMSKEHGLAPLKDHYTC-------MVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
G++ HG + LK Y C +VD+ + G L +A+ + + +PD V+W
Sbjct: 334 GKQI-------HGYS-LKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK-EPDIVLW 384
Query: 564 GSLLAA 569
S+++
Sbjct: 385 TSMISG 390
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 195/388 (50%), Gaps = 63/388 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L + V +++H +K+ S + N L+ +Y KCGCL A K F
Sbjct: 213 DKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTF 272
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +K+ TW+++IT G+AQ EAL
Sbjct: 273 ELSGDKDDITWSAMIT-------------------------------GYAQAGDSHEALN 301
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F MH SE++F ++AC+ + G Q+H K+ Y +Y +AL+DMY
Sbjct: 302 LFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYA 361
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR+ FD ++E +IV W S+I+ Y QNG AL ++ RM I P E+T+AS
Sbjct: 362 KCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMAS 421
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+SLAA ++G QIHA+ ++ ++ +G+AL MYAKCG L + VF RMP R
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 480
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ +++WNA+I+G +QNGE +AL LF L+
Sbjct: 481 D-------------------------------IMTWNAMISGLSQNGEGLKALELFEELR 509
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGR 405
+ P + TF N+L+AC+++ ++ G+
Sbjct: 510 HGTTKPDYVTFVNVLSACSHMGLVERGK 537
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 33/288 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F ++++C ++ + +++H +K+ + +I+ L+D+YAKCG L ARK FD +
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLK 377
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ W SM+SG+AQ+ AL + +
Sbjct: 378 EPDIVLWT-------------------------------SMISGYAQNGENETALTLYCR 406
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E E + S L AC+ + G Q+HA K +S +V +GSAL MY KCG
Sbjct: 407 MQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGS 466
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ VF M R+I++WN++I+ QNG ALE+F + +PD VT +V+SA
Sbjct: 467 LEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSA 526
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNA-LVDMYAKCGKLNEAR 308
C+ + + G +++ R+M E V A +VD+ ++ GKL+E +
Sbjct: 527 CSHMGLVERG-KVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETK 573
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 38/322 (11%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P + ++ C ++G IHA+L+R + + L N+LV++YAKCG + +A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSF-SSVYLTNSLVNLYAKCGSIVKA 64
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ VF+ + ++VVS +++GY++ +V GY+
Sbjct: 65 KLVFESITNKDVVSWNCLINGYSQKGTV-----------------------GYSF----- 96
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+ LF+ ++ E+ P +TF + A ++ + G QAH +K + D+F
Sbjct: 97 -VMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIK------TSNFYDVF 149
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VG+SLI+MY K G + D ++F+T+ ER+ VSW +I G A EA LF M
Sbjct: 150 VGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREE 209
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
D VL A + LV G++ ++ ++GL + +V + G+ GCLD+A
Sbjct: 210 GAHDKFIYTSVLSALTVPDLVHYGKQ-IHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
E + D + W +++
Sbjct: 269 LKTFE-LSGDKDDITWSAMITG 289
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 102/200 (51%), Gaps = 22/200 (11%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P H +F +LL C DLQ G+ H +++ +G S +++ NSL+++Y KCGS+
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLR------TGSFSSVYLTNSLVNLYAKCGSI 61
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGY--GTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+FE++ +D VSWN +I G +Q G + + LF++M P+ T GV
Sbjct: 62 VKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFT 121
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY------TCMVDLLGRAGCLDEAKTLIEAM 554
A S + + F + + H LA ++ + ++++ + GC+ +A+ + + +
Sbjct: 122 AASSS------PETFGGL-QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTI 174
Query: 555 PMQPDAVIWGSLLAACKVHR 574
P + + V W ++++ + R
Sbjct: 175 P-ERNTVSWATIISGYAMER 193
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/706 (35%), Positives = 368/706 (52%), Gaps = 114/706 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S VHA + S F +F+ N L+ +Y +CG
Sbjct: 144 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG--------- 194
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSE 134
W ++A ++F M ER D SWNS+V+ + Q
Sbjct: 195 ---------AW-------------ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 135 ALGYFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
A+ F +M +E+ + S + L ACA + G QVH +S DV++G+A+
Sbjct: 233 AMKMFERM-TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 291
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL--------------- 237
+DMY KCG + A +VF+ M+ +++VSWN+++T Y Q G DAL
Sbjct: 292 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 351
Query: 238 --------------------EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+VF +M+ G EP+ VTL S++S CAS G + H
Sbjct: 352 VTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCH 411
Query: 278 LMRC------EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
++ +DL++ NAL+DMY+KC AR +FD +P +
Sbjct: 412 AIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK-------------- 457
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES-VCPTHYTFG 389
+R+VV+W LI G Q+GE EAL LF ++L+ ++ V P +T
Sbjct: 458 ---------------DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
L ACA L L+ GRQ H +V+++ RF E + +FV N LIDMY K G V+ +F
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRN--RF---ESAMLFVANCLIDMYSKSGDVDAARVVF 557
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M +R+ VSW +++ G +G G EAL +F +M PD VT + VL ACSH+G+V+
Sbjct: 558 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVD 617
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G YF+ M+K+ G+ P +HY CMVDLL RAG LDEA LI MPM+P +W +LL+A
Sbjct: 618 QGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+V+ N+ LGEY A +LLE+E N G Y LLSN+YA W +V R+R LM+ G+ K+P
Sbjct: 678 CRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRP 737
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
GCSW++ F D HP++++IY +L+ L + +K +GYVP+
Sbjct: 738 GCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 783
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 285/556 (51%), Gaps = 51/556 (9%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM--SNKNVFTWNS 90
KS++ H +++ + +I +Y A V ++ S+ VF WN
Sbjct: 59 KSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 115
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I + GF++D +L+ M + W
Sbjct: 116 LIRRSVHLGFLEDVLQLYRRM---QRLGWRP----------------------------D 144
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
Y+F L AC F+ G VHA++ S + +V++G+ L+ MYG+CG AR+VFD
Sbjct: 145 HYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFD 204
Query: 211 GMRER---NIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLA 266
MRER ++VSWNS++ Y Q G + A+++F RM GI PD V+L +V+ ACAS+
Sbjct: 205 EMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG 264
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
A+ G Q+H +R L D+ +GNA+VDMYAKCG + EA VF+RM +++VVS +MV
Sbjct: 265 AWSRGKQVHGYALR-SGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 327 SGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+GY++ A +F K+ +E NVV+W+A+IAGY Q G EAL +FR +
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE-SDIFVGNSLIDMYMKCGS 441
P T +LL+ CA+ L G++ H H +K L + D+ V N+LIDMY KC S
Sbjct: 384 PNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 443
Query: 442 VEDGCRIFETMVERD--WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIG 497
+ +F+ + +D V+W +I G AQ+G EAL LF +ML P+ T+
Sbjct: 444 PKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISC 503
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L AC+ G + GR+ + + + + + C++D+ ++G +D A+ + + M Q
Sbjct: 504 ALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQ 562
Query: 558 PDAVIWGSLLAACKVH 573
+ V W SL+ +H
Sbjct: 563 RNGVSWTSLMTGYGMH 578
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/662 (35%), Positives = 358/662 (54%), Gaps = 76/662 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C K S+ R +H I + + S +++ L+D YAKCGCL
Sbjct: 122 FPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCL----------- 170
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD-RFSEALGYFV 140
DDA +F M +RD +WNSM+SGF+ H+ + E V
Sbjct: 171 --------------------DDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLV 210
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M ++ S G L A A + G ++H + + DV +G+ ++D+YGKC
Sbjct: 211 QMQNDVSPNSSTIVG-VLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQ 269
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMA---SGIEPDEVTLA 256
+ ARR+FD M +N V+W++++ Y +ALE+F +++ I VTLA
Sbjct: 270 CIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLA 329
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+ CA+L G +H ++ DL++GN L+ MYAKCG +N
Sbjct: 330 TVIRVCANLTDLSTGTCLHCYAIK-SGFVLDLMVGNTLLSMYAKCGIIN----------- 377
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
A F +M R+ VS+ A+I+GY QNG +EE L +F +
Sbjct: 378 --------------------GAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEM 417
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P T ++L ACA+LA L G +H + + + G +D + N+LIDMY
Sbjct: 418 QLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAI------ICGFTADTMICNALIDMY 471
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG ++ ++F+ M +R VSWN MI+ +G G EAL LF M G KPD VT I
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFI 531
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
++ ACSH+GLV EG+ +F++M+++ G+ P +HY CMVDLL RAG E + IE MP+
Sbjct: 532 CLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPL 591
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD +WG+LL+AC+V++N+ LGE V+KK+ ++ P ++G +VLLSNMY+ +GRW + +V
Sbjct: 592 EPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQV 651
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR-HPLNKEIYLVLKMLTREMKRVGYVPN 675
R +++G K PGCSWIEI G V+ F+ R HP +I L L EMKR+GY
Sbjct: 652 RFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711
Query: 676 AS 677
+S
Sbjct: 712 SS 713
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/564 (28%), Positives = 269/564 (47%), Gaps = 88/564 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQN------RLIDVYAKCGCLYGARKVF 77
LL+SC++SKS+ + +H ++K E + N +L+D+Y C L AR VF
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 78 DKMSN--KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
DKM + KNV WN +I R +A WN + EA
Sbjct: 75 DKMPHRPKNVVLWNLLI-------------RAYA---------WNG---------PYEEA 103
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ + KM + ++F L AC+ + G ++H + + R S+VY+ +AL+D
Sbjct: 104 IDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDF 163
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + A+ VFD M +R++V+WNS+I+ + + + D + + M + + P+ T+
Sbjct: 164 YAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTI 223
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+ A A + + + G +IH +R D+V+G ++D+Y KC ++ AR +FD M
Sbjct: 224 VGVLPAVAQVNSLRHGKEIHGFCVR-RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMG 282
Query: 316 I-RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
I +N V+ ++MV Y ++ A +F ++L
Sbjct: 283 IVKNEVTWSAMVGAYVVCDFMREALELFCQLL---------------------------- 314
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+LK + + + T ++ CANL DL G H + +K G D+ VGN+L+
Sbjct: 315 MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVL------DLMVGNTLLS 368
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + R F M RD VS+ A+I G QNG E L +F +M L G P+ T
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428
Query: 495 MIGVLCACSH-AGLVEEGRKYFSSMSKEHGL--APLKDHYTC--MVDLLGRAGCLDEAKT 549
+ VL AC+H AGL ++ S S + + D C ++D+ + G +D A+
Sbjct: 429 LASVLPACAHLAGL------HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482
Query: 550 LIEAMPMQPDAVIWGSLLAACKVH 573
+ + M + V W +++ A +H
Sbjct: 483 VFDRMH-KRGIVSWNTMIIAYGIH 505
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 208/458 (45%), Gaps = 79/458 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+SS +L + + S+ + +H ++ F ++ + ++DVY KC C+ AR++F
Sbjct: 219 NSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIF 278
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D M KN TW++++ + F+ +A LF +
Sbjct: 279 DMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL------------------------- 313
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ + + LS + + + CA D GT +H KS + D+ +G+ L+ MY
Sbjct: 314 ---LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMY 370
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG ++ A R F+ M R+ VS+ ++I+ Y QNG + + L +F+ M SGI P++ TLA
Sbjct: 371 AKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLA 430
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ ACA LA G H + C D ++ NAL+DMYAKCGK++ AR VFDRM
Sbjct: 431 SVLPACAHLAGLHYGSCSHCYAIIC-GFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R +V SWN +I Y +G EAL LF +
Sbjct: 490 RGIV-------------------------------SWNTMIIAYGIHGIGLEALLLFDNM 518
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV------GN 430
+ E + P TF L++AC +H+ +V G + + D +
Sbjct: 519 QSEGLKPDDVTFICLISAC-----------SHSGLVAEGKYWFNAMTQDFGIIPRMEHYA 567
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G ++ E M +E D W A++ C
Sbjct: 568 CMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSAC 605
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 141/304 (46%), Gaps = 31/304 (10%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D+ L + A ++ C +S +H IKS F ++ + N L+ +YAKCG + G
Sbjct: 319 DVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIING 378
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A + F++M ++ ++ +II+ G+ Q+
Sbjct: 379 AMRFFNEMDLRDAVSFTAIIS-------------------------------GYVQNGNS 407
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
E L F++M + + S L ACA G+ H +++D + +AL
Sbjct: 408 EEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNAL 467
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
IDMY KCG++ AR+VFD M +R IVSWN++I Y +G +AL +F M + G++PD+
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
VT ++SAC+ EG + + + + +VD+ ++ G E +
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587
Query: 313 RMPI 316
+MP+
Sbjct: 588 KMPL 591
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/662 (34%), Positives = 355/662 (53%), Gaps = 76/662 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L CL S + VH IK ++F+ L+++Y+KCG + AR +FD M
Sbjct: 186 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 245
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V WN ++ G ++ G +A +LF+ +
Sbjct: 246 ERDVVLWNMMLKGYVQLGLEKEAFQLFS-------------------------------E 274
Query: 142 MHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
H E+S L+ C AG+ D ++G QVH + KS SDV + ++L++MY K
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 334
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G AR VF+ M+ +++SWNS+I+ Q+ +++ +F+ ++ G++PD TLAS+
Sbjct: 335 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASIT 394
Query: 260 -----SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AC L +G QIHA ++ +DL + + ++DMY KCG + A VF+ +
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+ V+ TSM+S G NG ++AL ++
Sbjct: 454 SAPDDVAWTSMIS-------------------------------GCVDNGNEDQALRIYH 482
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+++ V P YTF L+ A + + L+ GRQ H +V+K SD FVG SL+D
Sbjct: 483 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC------VSDPFVGTSLVD 536
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG++ED R+F+ M R+ WNAM+VG AQ+G EA+ LFK M G +PD V+
Sbjct: 537 MYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVS 596
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
IG+L ACSHAGL E +Y SM ++G+ P +HY+C+VD LGRAG + EA +IE M
Sbjct: 597 FIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 656
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P + A I +LL AC++ ++ G+ VA +L +EP +S YVLLSN+YA RW +V
Sbjct: 657 PFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 716
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RK+M+++ V K PG SWI++ +++F+V D+ HP IY ++ + + ++ GYVP
Sbjct: 717 DARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVP 776
Query: 675 NA 676
+
Sbjct: 777 DT 778
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 268/560 (47%), Gaps = 77/560 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL + + + ++ + HARI+ S A + F+ N L+ +Y+KCG L AR+VFD ++
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ TWN+I+ AS+ D G AQ E L F + +
Sbjct: 143 LVTWNAILGAYA------------ASVDSND---------GNAQ-----EGLHLFRLLRA 176
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + + L C S VH K DV++ AL+++Y KCGR+
Sbjct: 177 SLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRD 236
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-- 262
AR +FD MRER++V WN ++ Y Q G +A ++F SG+ PDE ++ +++ C
Sbjct: 237 ARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLW 296
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A + G Q+H ++ L +D+ + N+LV+MY+K G AR VF+ M +++S
Sbjct: 297 AGTDDLELGKQVHGIAVK-SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISW 355
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
SM+S A++S LE EE++ LF L E +
Sbjct: 356 NSMISSCAQSS------------LE-------------------EESVNLFIDLLHEGLK 384
Query: 383 PTHYTFGNLL-----NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
P H+T ++ AC L L G+Q H H +K G +SD+ V + ++DMY+
Sbjct: 385 PDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF------DSDLHVNSGILDMYI 438
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + + +F + D V+W +MI GC NG +AL ++ +M PD T
Sbjct: 439 KCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFAT 498
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMP 555
++ A S +E+GR+ +++ K L + D + T +VD+ + G +++A L + M
Sbjct: 499 LIKASSCVTALEQGRQLHANVIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Query: 556 MQPDAVIWGSLLAACKVHRN 575
++ + +W ++L H N
Sbjct: 556 VR-NIALWNAMLVGLAQHGN 574
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 371/661 (56%), Gaps = 75/661 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKC-GCLYGARKVFDK 79
F + +C +++S + + ++K+ F S++ + LID++ K G L A KVFD+
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M ++NV TW +IT + GF DA LF M ++SG+ DRF
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDM----------VLSGYVP-DRF------- 146
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ +SACA +G Q H L+ KS DV +G +L+DMY KC
Sbjct: 147 -------------TLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKC 193
Query: 200 ---GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTL 255
G V AR+VFD M N++SW ++IT Y Q+G +A+E+F+ M+ ++P+ T
Sbjct: 194 VADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTF 253
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+SV+ ACA+L+ G Q++A +++ +L + +GN+L+ MY++CG + AR FD +
Sbjct: 254 SSVLKACANLSDIWLGEQVYALVVKM-RLASINCVGNSLISMYSRCGNMENARKAFDVLF 312
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+N+VS ++V+ YAK+ + +EEA LF
Sbjct: 313 EKNLVSYNTIVNAYAKSLN-------------------------------SEEAFELFNE 341
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ +TF +LL+ +++ + G Q H+ ++K G + S++ + N+LI M
Sbjct: 342 IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFK------SNLHICNALISM 395
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y +CG++E ++F M + + +SW +MI G A++G+ T AL F KML G P+ VT
Sbjct: 396 YSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTY 455
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I VL ACSH GL+ EG K+F SM EHG+ P +HY C+VDLLGR+G L+EA L+ +MP
Sbjct: 456 IAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMP 515
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ DA++ + L AC+VH N+ LG++ A+ +LE +P + Y+LLSN++A G+W EV
Sbjct: 516 FKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAE 575
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+RK M++R + K+ GCSWIE+ V+ F V D HP +EIY L L ++K +GY+P+
Sbjct: 576 IRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPS 635
Query: 676 A 676
Sbjct: 636 T 636
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 270/524 (51%), Gaps = 48/524 (9%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+RD SW++++S +A +++ EA+ F M F +EY F AC+ + +G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 173 VHALLSKSRY-SSDVYMGSALIDMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+ L K+ Y SDV +G ALIDM+ K G + A +VFD M +RN+V+W +IT ++Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G + DA+++F+ M+ SG PD TL+ VVSACA + G Q H +M+ L D+ +
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMK-SGLDLDVCV 182
Query: 291 GNALVDMYAKC---GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
G +LVDMYAKC G +++AR VFDRMP+ NV+S T++++GY ++
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSG-------------- 228
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
G + EA+ LF + + V P H+TF ++L ACANL+D+ LG Q
Sbjct: 229 ----------------GCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ VVK L ++ VGNSLI MY +CG++E+ + F+ + E++ VS+N ++
Sbjct: 273 YALVVKMRLASINC------VGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAY 326
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
A++ EA LF ++ G + T +L S G + +G + S + K G
Sbjct: 327 AKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSN 385
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
++ + R G ++ A + M + + W S++ H K+L
Sbjct: 386 LHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITGFAKHGFATRALETFHKML 444
Query: 588 E--IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR-KRGVVKQ 628
E + P N Y+ + + + +G E ++ K M+ + G+V +
Sbjct: 445 EAGVSP-NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 210/401 (52%), Gaps = 51/401 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + ++ +C +S R+ H ++KS ++ + L+D+YAKC G + AR
Sbjct: 144 DRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDAR 203
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
KVFD+M NV +W +IITG ++ G D E
Sbjct: 204 KVFDRMPVHNVMSWTAIITGYVQSGGCD------------------------------RE 233
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ F++M + ++F S L ACA D +G QV+AL+ K R +S +G++LI
Sbjct: 234 AIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLIS 293
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY +CG + AR+ FD + E+N+VS+N+++ Y ++ + +A E+F + +G + T
Sbjct: 294 MYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFT 353
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++S +S+ A +G QIH+R+++ +++L + NAL+ MY++CG + A VF+ M
Sbjct: 354 FASLLSGASSIGAIGKGEQIHSRILK-SGFKSNLHICNALISMYSRCGNIEAAFQVFNEM 412
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEAL 370
NV+S TSM++G+AK A F KMLE V V++ A+++ + G E L
Sbjct: 413 GDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGL 472
Query: 371 GLFRLLKRE-SVCP--THYTFGNLLNACANLADLQLGRQAH 408
F+ +K E + P HY AC + DL LGR H
Sbjct: 473 KHFKSMKVEHGIVPRMEHY-------AC--VVDL-LGRSGH 503
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+I G +++ FA LL ++ ++H+RI+KS F S + I N LI +Y++CG
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVS 124
+ A +VF++M + NV +W S+ITG K GF A F M E ++ ++ +++S
Sbjct: 401 NIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Query: 125 GFAQHDRFSEALGYFVKMHSEN 146
+ SE L +F M E+
Sbjct: 461 ACSHVGLISEGLKHFKSMKVEH 482
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/665 (36%), Positives = 367/665 (55%), Gaps = 72/665 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN-- 82
LL++ ++++S+ ++H +II + + S F+ N LI++YAKCGCL A +F +
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
K + TW S+IT L S F H +AL F +M
Sbjct: 208 KTIVTWTSLITHL----------------------------SHFNMH---LQALSLFNQM 236
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
++++F S LSA A ++ G Q+H+L+ K + +++++G+AL+DMY KC +
Sbjct: 237 RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 296
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSA 261
A RVFD M ERN+VSWNS+I + N A+ VF ++ + P+EV+++SV+SA
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA++ G Q+H +++ + V+ N+L+DMY KC +E
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVM-NSLMDMYFKCRFFDEG-------------- 401
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
VK +F + +R+VV+WN L+ G+ QN + EEA F +++RE +
Sbjct: 402 -------------VK----LFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P +F +L++ A+LA L G H ++K G ++ + SLI MY KCGS
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIK------LGYVKNMCILGSLITMYAKCGS 498
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D ++FE + + + +SW AMI +G + + LF+ ML G +P HVT + VL A
Sbjct: 499 LVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 558
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH G VEEG +F+SM K H + P +HY CMVDLLGRAG LDEAK IE+MPM+P
Sbjct: 559 CSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPS 618
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL AC+ + N+ +G A++L E+EP N G YVLL+NM GR E VR+LM
Sbjct: 619 VWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMG 678
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEA 681
GV K+PGCSWI++ VF D+ H + EIY +L+ L + +K+ GYV
Sbjct: 679 VNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTN 738
Query: 682 YEEQN 686
+ E+N
Sbjct: 739 HLEEN 743
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 198/424 (46%), Gaps = 70/424 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L + + V +++H+ I K F + IF+ L+D+YAKC ++ A +VFD+M
Sbjct: 248 FSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+N+ +WNS M+ GF ++ + A+G F
Sbjct: 308 ERNLVSWNS-------------------------------MIVGFFHNNLYDRAVGVFKD 336
Query: 142 MHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ E + +E S S LSACA G QVH ++ K Y+ ++L+DMY KC
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++F + +R++V+WN L+ + QN +A F M GI PDE + ++V+
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+ ASLAA +G IH ++++ ++N +LG +L+ MYAKCG L +A VF+ + NV+
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKNMCILG-SLITMYAKCGSLVDAYQVFEGIEDHNVI 515
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLF--- 373
S T+M+S Y +F ML + V++ +++ + G EE L F
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575
Query: 374 ------------------------------RLLKRESVCPTHYTFGNLLNACANLADLQL 403
R ++ + PT +G LL AC +L++
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635
Query: 404 GRQA 407
GR+A
Sbjct: 636 GREA 639
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 51/269 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F+ +L S ++ +H +IIK + + I LI +YAKCG L A +VF
Sbjct: 447 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 506
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFS 133
+ + + NV +W ++I+ G + LF M E ++ ++S + R
Sbjct: 507 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566
Query: 134 EALGYF---VKMHSENFALSEYS------------------------------FGSALSA 160
E L +F K+H N Y+ +G+ L A
Sbjct: 567 EGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626
Query: 161 CAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV-----FDGMRE 214
C + KMG + L Y+ Y+ L +M + GR+ A V +G+R+
Sbjct: 627 CRKYGNLKMGREAAERLFEMEPYNPGNYV--LLANMCTRSGRLEEANEVRRLMGVNGVRK 684
Query: 215 RNIVSW------NSLITCYEQNGPASDAL 237
SW + T ++++ +SD +
Sbjct: 685 EPGCSWIDVKNMTFVFTAHDRSHSSSDEI 713
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/719 (33%), Positives = 368/719 (51%), Gaps = 119/719 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F + +C SV HA + + F S +F+ N L+ +Y++C L
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL------- 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA ++F M D SWNS++ +A+ + AL
Sbjct: 179 ------------------------SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + + L CA +G Q+H S ++++G+ L+DMY
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM------------- 243
KCG + A VF M +++VSWN+++ Y Q G DA+ +F +M
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 244 ----------------------MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
++SGI+P+EVTL SV+S CAS+ A G +IH ++
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 282 E-KLR-----NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
LR ++ ++ N L+DMYAKC K V
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKK-------------------------------V 423
Query: 336 KSARLMFTKM--LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE--SVCPTHYTFGNL 391
+AR MF + ER+VV+W +I GY+Q+G+ +AL L + E P +T
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L ACA+LA L++G+Q H + +++ +FV N LIDMY KCGS+ D +F+
Sbjct: 484 LVACASLAALRIGKQIHAYALRN-----QQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ ++ V+W +++ G +GYG EALG+F +M G K D VT++ VL ACSH+G++++G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+YF+ M G++P +HY C+VDLLGRAG L+ A LIE MPM+P V+W + L+ C+
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H + LGEY A+K+ E+ ++ G Y LLSN+YA GRW +V R+R LMR +GV K+PGC
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGC 718
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
SW+E + F V DK HP KEIY VL + +K +GYVP DDE ++
Sbjct: 719 SWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 276/524 (52%), Gaps = 19/524 (3%)
Query: 66 KCGCLYGARKVFDKMSNKNVFTWN---SIITGLLKWGFIDDASRLFASMPERDQ--CSWN 120
KC + + + K+ + + T N +I+ + G + A L P D WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
S++ + + ++ L F MHS ++ Y+F AC + G HAL +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ S+V++G+AL+ MY +C +S AR+VFD M ++VSWNS+I Y + G ALE+F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 241 VRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
RM G PD +TL +V+ CASL G Q+H + E ++N + +GN LVDMYA
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN-MFVGNCLVDMYA 275
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNA 355
KCG ++EA VF M +++VVS +MV+GY++ + A +F KM E +VV+W+A
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
I+GY Q G EALG+ R + + P T ++L+ CA++ L G++ H + +K+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 416 LRFL-SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGY 472
+ +G + V N LIDMY KC V+ +F+++ ERD V+W MI G +Q+G
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 473 GTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFS-SMSKEHGLAPLKD 529
+AL L +M C +P+ T+ L AC+ + G++ + ++ + PL
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
C++D+ + G + +A+ + + M M + V W SL+ +H
Sbjct: 516 S-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/652 (37%), Positives = 371/652 (56%), Gaps = 31/652 (4%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
K + + +R+ V+D R+ A + + ++ N ++ Y+ G L A +F +
Sbjct: 43 KAITAHMRAGRVADAERLFAAMPRRSTST----YNAMLAGYSANGRLPLAASLFRAIPRP 98
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+ +++N+++ L + DA LF MP RD ++N M+S A H S A YF +
Sbjct: 99 DNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYF-DLA 157
Query: 144 SENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
E A+S + L+A G V+ G L SR D +AL+ Y + G+
Sbjct: 158 PEKDAVS---WNGMLAAYVRNGRVEEARG------LFNSRTEWDAISWNALMSGYVQWGK 208
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S AR +FD M R++VSWN +++ Y + G +A +F A+ + D T +VVS
Sbjct: 209 MSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD---AAPVR-DVFTWTAVVSG 264
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + G+ AR + + V NA+V Y + ++EA+ +F+ MP RNV S
Sbjct: 265 YA-----QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVAS 319
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M++GYA+A ++ A+ +F M +++ VSW A++A Y+Q G +EE L LF + R
Sbjct: 320 WNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGE 379
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
F +L+ CA++A L+ G Q H +++ +G FVGN+L+ MY KCG+
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIR------AGYGVGCFVGNALLAMYFKCGN 433
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ED FE M ERD VSWN MI G A++G+G EAL +F M KPD +T++GVL A
Sbjct: 434 MEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 493
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+GLVE+G YF SM + G+ +HYTCM+DLLGRAG L EA L++ MP +PD+
Sbjct: 494 CSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDST 553
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W + ++R +M
Sbjct: 554 MWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMME 613
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+RGV K PG SWIE+ V+ F D HP ++IY L+ L MK+ GYV
Sbjct: 614 ERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV 665
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 175/375 (46%), Gaps = 34/375 (9%)
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
R +V + I + + GRV+ A R+F M R+ ++N+++ Y NG A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+ PD + +++ A A ++ + AR + E D V N ++ +A
Sbjct: 93 RAI----PRPDNYSYNTLLHALAVSSSLAD-----ARGLFDEMPVRDSVTYNVMISSHAN 143
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G ++ AR FD P ++ VS M++ Y + V+ AR +F E + +SWNAL++GY
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGY 203
Query: 361 TQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q G+ EA LF R+ R+ V ++ +++ A D+ R+ F
Sbjct: 204 VQWGKMSEARELFDRMPGRDVV-----SWNIMVSGYARRGDMVEARRL----------FD 248
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ D+F +++ Y + G +E+ R+F+ M ER+ VSWNAM+ Q EA L
Sbjct: 249 AAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F M+ C TM L + AG++EE + F +M ++ ++ + M+
Sbjct: 309 F-NMMPCRNVASWNTM---LTGYAQAGMLEEAKAVFDTMPQKDAVS-----WAAMLAAYS 359
Query: 540 RAGCLDEAKTLIEAM 554
+ GC +E L M
Sbjct: 360 QGGCSEETLQLFIEM 374
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 40/360 (11%)
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+L +++ N + + + G++ +A +F MP R+ + +M++GY+ + A +F
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADL 401
+ + S+N L+ + +A GLF + R+SV T+ ++++ AN +
Sbjct: 93 RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSV-----TYNVMISSHANHGLV 147
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
L R F E D N ++ Y++ G VE+ +F + E D +SWN
Sbjct: 148 SLARH----------YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWN 197
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
A++ G Q G +EA LF +M D V+ ++ + G + E R+ F +
Sbjct: 198 ALMSGYVQWGKMSEARELFDRM----PGRDVVSWNIMVSGYARRGDMVEARRLFDA---- 249
Query: 522 HGLAPLKDHYTCMVDLLGRA--GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
AP++D +T + G A G L+EA+ + +AMP + +AV W +++AA R M+
Sbjct: 250 ---APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRR--MMD 303
Query: 580 EYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E AK+L + P N + + YA+ G E V M ++ V SW +L
Sbjct: 304 E--AKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV-----SWAAMLA 356
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 23/286 (8%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+++ S FA +L +C ++ ++H R+I++ + F+ N L+ +Y KCG + AR
Sbjct: 380 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 439
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
F++M ++V +WN++I G + GF +A +F M + D + +++ +
Sbjct: 440 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 499
Query: 132 FSEALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + YF MH +F ++ Y+ L AG + + H L+ + D
Sbjct: 500 VEKGISYFYSMH-HDFGVTAKPEHYTCMIDLLGRAGRL-----AEAHDLMKDMPFEPDST 553
Query: 188 M-----GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
M G++ I + GR S A ++F+ + N + L Y +G DA ++ V
Sbjct: 554 MWGALLGASRIHRNPELGR-SAAEKIFE-LEPENAGMYVLLSNIYASSGKWRDARKMRVM 611
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
M G++ +V S + + F G +H + DL
Sbjct: 612 MEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 655
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/687 (33%), Positives = 367/687 (53%), Gaps = 58/687 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F K+ +C K+ + V+ ++ F ++ ++D++ KCG + AR+ F
Sbjct: 189 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFF 248
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+++ K+VF WN +++G G A + + M + DQ +WN+++SG+AQ +F
Sbjct: 249 EEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFE 308
Query: 134 EALGYFV------------------------------------KMHSENFALSEYSFGSA 157
EA YF+ KM E + + SA
Sbjct: 309 EASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASA 368
Query: 158 LSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+SAC + G ++H K SD+ +G++L+D Y KC V ARR F +++ +
Sbjct: 369 VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTD 428
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWN+++ Y G +A+E+ M GIEPD +T +V+ K L+
Sbjct: 429 LVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQ 488
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC--VFDRMPIRNVVS-----ETSMVSGY 329
R+ N + AL A CG++ + +RN + ++++S Y
Sbjct: 489 RMHSMGMDPNTTTISGAL----AACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
+ S++ A +F+++ R+VV WN++I+ Q+G + AL L R + +V T
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+ L AC+ LA L+ G++ H +++ GL ++ F+ NSLIDMY +CGS++ RIF
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGL------DTCNFILNSLIDMYGRCGSIQKSRRIF 658
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M +RD VSWN MI +G+G +A+ LF+ G KP+H+T +L ACSH+GL+E
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIE 718
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EG KYF M E+ + P + Y CMVDLL RAG +E IE MP +P+A +WGSLL A
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C++H N L EY A+ L E+EP +SG YVL++N+Y+ GRW + ++R LM++RGV K P
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPP 838
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEI 656
GCSWIE+ ++ F+V D HPL ++I
Sbjct: 839 GCSWIEVKRKLHSFVVGDTSHPLMEQI 865
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/627 (25%), Positives = 282/627 (44%), Gaps = 114/627 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A +L C + ++ +VHA+++ + F+ +RL++VY + GC+ AR++FDKMS
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NVF+W +I+ M G ++ E + F
Sbjct: 152 ERNVFSWTAIM----------------------------EMYCGLGDYE---ETIKLFYL 180
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E + F AC+ ++++G V+ + + + + +++DM+ KCGR
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR F+ + +++ WN +++ Y G AL+ M SG++PD+VT +++S
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG 300
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A F+E + + + + ++V AL+ + G EA VF +M + V
Sbjct: 301 YAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKP 360
Query: 322 ET----------------------------------------SMVSGYAKASSVKSARLM 341
+ S+V YAK SV+ AR
Sbjct: 361 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 420
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP------------THY--- 386
F + + ++VSWNA++AGY G +EEA+ L +K + + P T Y
Sbjct: 421 FGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480
Query: 387 --------------------TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
T L AC + +L+LG++ H +V+++ + +G
Sbjct: 481 KAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG----- 535
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
VG++LI MY C S+E C +F + RD V WN++I CAQ+G AL L ++M L
Sbjct: 536 -VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
+ + VTM+ L ACS + +G++ + + GL ++D+ GR G + +
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + + MP Q D V W +++ +H
Sbjct: 654 SRRIFDLMP-QRDLVSWNVMISVYGMH 679
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 181/401 (45%), Gaps = 62/401 (15%)
Query: 250 PDEVT--LASVVSACASLAAFKEGLQIHARLMR-----CEKLRNDLVLGNALVDMYAKCG 302
PDE AS++ C L + G Q+HA+L+ CE LG+ L+++Y + G
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE------FLGSRLLEVYCQTG 138
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
CV D AR MF KM ERNV SW A++ Y
Sbjct: 139 ------CVED-------------------------ARRMFDKMSERNVFSWTAIMEMYCG 167
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G+ EE + LF L+ E V P H+ F + AC+ L + ++G+ + +++ G
Sbjct: 168 LGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF------ 221
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
E + V S++DM++KCG ++ R FE + +D WN M+ G G +AL
Sbjct: 222 EGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISD 281
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M L G KPD VT ++ + +G EE KYF M P +T ++ + G
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341
Query: 543 CLDEAKTLIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV- 598
EA ++ M ++ P+++ S ++AC + G + +++E +S V
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401
Query: 599 -LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG-CSWIEIL 637
L + YA+ R EV R RK G++KQ SW +L
Sbjct: 402 NSLVDYYAKC-RSVEVAR-----RKFGMIKQTDLVSWNAML 436
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 345/639 (53%), Gaps = 80/639 (12%)
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI----------------- 101
+L+ YA CG L R+VFD M KNV+ WN +++ K G
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 102 ---DDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+ AS LF + +RD SWNSM+SG+ + LG + +M + + S L
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
CA S +G VH+L KS + + + L+DMY KCG + A RVF+ M ERN+V
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I Y ++G + A+ + +M G++ D V + S++ ACA + G +H
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DY 239
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + ++L + NAL+DMYAKCG S++ A
Sbjct: 240 IKANNMASNLFVCNALMDMYAKCG-------------------------------SMEGA 268
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+F+ M+ ++++SWN ++ + P T +L ACA+L
Sbjct: 269 NSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTMACILPACASL 307
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ L+ G++ H +++++G SD V N+L+D+Y+KCG + +F+ + +D V
Sbjct: 308 SALERGKEIHGYILRNGY------SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLV 361
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW MI G +GYG EA+ F +M G +PD V+ I +L ACSH+GL+E+G ++F M
Sbjct: 362 SWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIM 421
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ + P +HY CMVDLL R G L +A IE +P+ PDA IWG+LL C+++ +I L
Sbjct: 422 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIEL 481
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E VA+++ E+EP N+G YVLL+N+YAE +W EV R+R+ + K+G+ K PGCSWIEI G
Sbjct: 482 AEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKG 541
Query: 639 HVNVFMV-KDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
VN+F+ + HP +K+I +LK + R+MK GY P
Sbjct: 542 RVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKT 580
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 206/458 (44%), Gaps = 102/458 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + +L C +S ++S + VH+ IKS F I N L+D+Y+KCG L GA +V
Sbjct: 111 VDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 170
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+KM +NV +W S+I G + G+ D A L
Sbjct: 171 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ--------------------------- 203
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+M E L + S L ACA S G VH + + +S++++ +AL+DMY
Sbjct: 204 ----QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 259
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A VF M ++I+SWN+ M ++PD T+A
Sbjct: 260 AKCGSMEGANSVFSTMVVKDIISWNT---------------------MVGELKPDSRTMA 298
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACASL+A + G +IH ++R +D + NALVD+Y KCG L AR +FD +P
Sbjct: 299 CILPACASLSALERGKEIHGYILR-NGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 357
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+++VS T M IAGY +G EA+ F +
Sbjct: 358 KDLVSWTVM-------------------------------IAGYGMHGYGNEAIATFNEM 386
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL---- 432
+ + P +F ++L AC +H+ +++ G RF ++D + L
Sbjct: 387 RDAGIEPDEVSFISILYAC-----------SHSGLLEQGWRFFYIMKNDFNIEPKLEHYA 435
Query: 433 --IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+D+ + G++ + ET+ + D W A++ GC
Sbjct: 436 CMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC 473
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/661 (34%), Positives = 366/661 (55%), Gaps = 79/661 (11%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V+ +I LK G ID A +F ++PE+ +W +M+SG + R +L F +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ +N Y + LSAC+ + G Q+HA + + D + + LID Y KCGR
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A ++F+GM +NI+SW +L++ Y+QN +A+E+F M G++PD +S++++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLRN-----------DLVLG 291
CASL A G Q+HA ++ C+ L + D+VL
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 292 NALVDMYAKCG---KLNEARCVFDRMPIR------------------------------- 317
NA+++ Y++ G +L+EA +F M R
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 318 --------NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
++ + ++++ Y+ +K +RL+F +M +++V WN++ AGY Q ENEEA
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF L+ P +TF N++ A NLA +QLG++ H ++K GL E + ++
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL------ECNPYIT 593
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+DMY KCGS ED + F++ RD V WN++I A +G G +AL + +KM+ G +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+++T +GVL ACSHAGLVE+G K F M + G+ P +HY CMV LLGRAG L++A+
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
LIE MP +P A++W SLL+ C N+ L E+ A+ + +P +SG + +LSN+YA G
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W E +VR+ M+ GVVK+PG SWI I V++F+ KDK H +IY VL L +++
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRG 832
Query: 670 V 670
V
Sbjct: 833 V 833
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 274/560 (48%), Gaps = 74/560 (13%)
Query: 20 SPFAKLLDSCLRSKSVSDTR------RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
SP +L S +++ S D R ++ + ++KS F ++++ LID Y K G + A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R VFD + K+ TW ++I+G +K G R
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMG-------------------------------RSY 231
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+L F ++ +N Y + LSAC+ + G Q+HA + + D + + LI
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCGRV A ++F+GM +NI+SW +L++ Y+QN +A+E+F M G++PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+S++++CASL A G Q+HA ++ L ND + N+L+DMYAKC L +AR VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKA-NLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+VV +M+ GY++ + W E EAL +F
Sbjct: 411 FAAADVVLFNAMIEGYSRLGT-----------------QW-----------ELHEALNIF 442
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R ++ + P+ TF +LL A A+L L L +Q H + K+GL DIF G++LI
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL------DIFAGSALI 496
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
D+Y C ++D +F+ M +D V WN+M G Q EAL LF ++ L E+PD
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T ++ A + V+ G+++ + K GL ++D+ + G ++A ++
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 554 MPMQPDAVIWGSLLAACKVH 573
+ D V W S++++ H
Sbjct: 616 AASR-DVVCWNSVISSYANH 634
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 276/561 (49%), Gaps = 91/561 (16%)
Query: 22 FAKLL-----DSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
FA+LL D L ++V VH +II + ++ N LI++Y++ G + ARKV
Sbjct: 47 FARLLQLRASDDLLHYQNV-----VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+KM PER+ SW++MVS H + E+L
Sbjct: 102 FEKM-------------------------------PERNLVSWSTMVSACNHHGIYEESL 130
Query: 137 GYFVKM-HSENFALSEYSFGSALSACAGSVDFK---MGTQVHALLSKSRYSSDVYMGSAL 192
F++ + + +EY S + AC+G +D + M Q+ + L KS + DVY+G+ L
Sbjct: 131 VVFLEFWRTRKDSPNEYILSSFIQACSG-LDGRGRWMVFQLQSFLVKSGFDRDVYVGTLL 189
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
ID Y K G + AR VFD + E++ V+W ++I+ + G + +L++F ++M + PD
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
L++V+SAC+ L + G QIHA ++R L D L N L+D Y KCG++ A +F+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
MP +N++S T+++SGY QN ++EA+ L
Sbjct: 309 GMPNKNIISWTTLLSGY-------------------------------KQNALHKEAMEL 337
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + + + P Y ++L +CA+L L G Q H + +K L +D +V NSL
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL------GNDSYVTNSL 391
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG---TEALGLFKKMLLCGEK 489
IDMY KC + D ++F+ D V +NAMI G ++ G EAL +F+ M +
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIR 451
Query: 490 PDHVTMIGVLCACSHAGLVEEG-RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
P +T + +L A A L G K + ++GL + ++D+ CL +++
Sbjct: 452 PSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 549 TLIEAMPMQPDAVIWGSLLAA 569
+ + M ++ D VIW S+ A
Sbjct: 510 LVFDEMKVK-DLVIWNSMFAG 529
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCP 383
+++ Y++A + AR +F KM ERN+VSW+ +++ +G EE+L +F + P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 384 THYTFGNLLNACANLADLQLGR------QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
Y + + AC+ L GR Q + +VK SG + D++VG LID Y+
Sbjct: 145 NEYILSSFIQACSGLD----GRGRWMVFQLQSFLVK------SGFDRDVYVGTLLIDFYL 194
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K G+++ +F+ + E+ V+W MI GC + G +L LF +++ PD +
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACS +E G++ + + + +GL ++D + G + A L MP
Sbjct: 255 VLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-N 312
Query: 558 PDAVIWGSLLAACK---VHRNIM 577
+ + W +LL+ K +H+ M
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAM 335
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V HG + G E D ++ N LI++Y + G + ++FE M ER+ VSW+ M+ C
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 468 AQNGYGTEALGLFKKMLLC-GEKPDHVTMIGVLCACSHAGLVEEGRKY---FSSMSKEHG 523
+G E+L +F + + P+ + + ACS GL GR S + G
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSG 178
Query: 524 LAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+D Y T ++D + G +D A+ + +A+P + V W ++++ C
Sbjct: 179 FD--RDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 248/706 (35%), Positives = 367/706 (51%), Gaps = 114/706 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S VHA + S F +F+ N L+ +Y +CG
Sbjct: 125 DHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG--------- 175
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSE 134
W ++A ++F M ER D SWNS+V+ + Q
Sbjct: 176 ---------AW-------------ENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 135 ALGYFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
A+ F +M +E+ + S + L ACA + G QVH +S DV++G+A+
Sbjct: 214 AMKMFERM-TEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAV 272
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL--------------- 237
+DMY KCG + A +VF+ M+ +++VSWN+++T Y Q G DAL
Sbjct: 273 VDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNV 332
Query: 238 --------------------EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+VF +M G EP+ VTL S++S CA G + H
Sbjct: 333 VTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCH 392
Query: 278 LMRC------EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
++ +DL++ NAL+DMY+KC AR +FD +P +
Sbjct: 393 AIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPK-------------- 438
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES-VCPTHYTFG 389
+R+VV+W LI G Q+GE EAL LF ++L+ ++ V P +T
Sbjct: 439 ---------------DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
L ACA L L+ GRQ H +V+++ RF E + +FV N LIDMY K G V+ +F
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRN--RF---ESAMLFVANCLIDMYSKSGDVDAARVVF 538
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M +R+ VSW +++ G +G G EAL +F +M G PD VT + VL ACSH+G+V+
Sbjct: 539 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVD 598
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G YF+ M+K+ G+ P +HY CMVDLL RAG LDEA LI MPM+P +W +LL+A
Sbjct: 599 QGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+V+ N+ LGEY A +LLE+E N G Y LLSN+YA W +V R+R LM+ G+ K+P
Sbjct: 659 CRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRP 718
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
GCSW++ F D HP++++IY +L+ L + +K +GYVP+
Sbjct: 719 GCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPD 764
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 286/556 (51%), Gaps = 51/556 (9%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM--SNKNVFTWNS 90
KS++ +H +++ + +I +Y A V ++ S+ VF WN
Sbjct: 40 KSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 96
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I + GF++D +L+ M + W
Sbjct: 97 LIRRSVHLGFLEDVLQLYRRM---QRLGWRP----------------------------D 125
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
Y+F L AC F+ G VHA++ S + +V++G+ L+ MYG+CG AR+VFD
Sbjct: 126 HYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFD 185
Query: 211 GMRER---NIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLA 266
MRER ++VSWNS++ Y Q G + A+++F RM GI PD V+L +V+ ACAS+
Sbjct: 186 EMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVG 245
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
A+ G Q+H +R L D+ +GNA+VDMYAKCG + EA VF+RM +++VVS +MV
Sbjct: 246 AWSRGKQVHGYALR-SGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 327 SGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+GY++ A +F K+ +E NVV+W+A+IAGY Q G EAL +FR ++
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE-SDIFVGNSLIDMYMKCGS 441
P T +LL+ CA L G++ H H +K L + D+ V N+LIDMY KC S
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424
Query: 442 VEDGCRIFETMVERD--WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIG 497
+ +F+ + +D V+W +I G AQ+G EAL LF +ML P+ T+
Sbjct: 425 PKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISC 484
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L AC+ G + GR+ + + + + + C++D+ ++G +D A+ + + M Q
Sbjct: 485 ALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQ 543
Query: 558 PDAVIWGSLLAACKVH 573
+ V W SL+ +H
Sbjct: 544 RNGVSWTSLMTGYGMH 559
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 326/524 (62%), Gaps = 40/524 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ L+ C K G +HA + S + D+ + + +++MY KCG + A+ +FD M
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+++VSW LI+ Y Q+G AS+AL +F +M+ G +P+E TL+S++ A + + G Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+HA ++ N + +G++L+DMYA+ + E
Sbjct: 228 LHAFSLKYGYDMN-VHVGSSLLDMYARWAHMRE--------------------------- 259
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A+++F + +NVVSWNALIAG+ + GE E + LF + R+ PTH+T+ ++L
Sbjct: 260 ----AKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL- 314
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+ L+ G+ H HV+K SG + ++GN+LIDMY K GS++D ++F +V
Sbjct: 315 ACASSGSLEQGKWVHAHVIK------SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLV 368
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++D VSWN++I G AQ+G G EAL LF++ML +P+ +T + VL ACSH+GL++EG+
Sbjct: 369 KQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQY 428
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M K+H + H+ +VDLLGRAG L+EA IE MP++P A +WG+LL AC++H
Sbjct: 429 YFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMH 487
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N+ LG Y A+++ E++P +SGP+VLLSN+YA GR + +VRK+M++ GV K+P CSW
Sbjct: 488 KNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSW 547
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI V+VF+ D HP+ +EI + + ++ ++K +GYVP+ S
Sbjct: 548 VEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYVPDTS 591
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 214/447 (47%), Gaps = 71/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++K+L+ C + + R +HA I S F ++ + N ++++YAKCG L
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL----------- 156
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++A LF MP +D SW ++SG++Q + SEAL F K
Sbjct: 157 --------------------EEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPK 196
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F +E++ S L A G Q+HA K Y +V++GS+L+DMY +
Sbjct: 197 MLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAH 256
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A+ +F+ + +N+VSWN+LI + + G + +F +M+ G EP T +SV+ A
Sbjct: 257 MREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-A 315
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS + ++G +HA +++ + +GN L+DMYAK G + +A+ VF R+ +++VS
Sbjct: 316 CASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVS 374
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S++SGYA Q+G EAL LF + + V
Sbjct: 375 WNSIISGYA-------------------------------QHGLGAEALQLFEQMLKAKV 403
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF ++L AC++ L G+ + KH + E+ + +++D+ + G
Sbjct: 404 QPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKI------EAQVAHHVTVVDLLGRAGR 457
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGC 467
+ + + E M ++ W A++ C
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGAC 484
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 164/326 (50%), Gaps = 41/326 (12%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EP+ + +++ C L K+G IHA + + +DLVL N +++MYAKCG L EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHI-QSSTFEDDLVLLNFILNMYAKCGSLEEA 159
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ +FD+MP +++VS T ++SGY+++ G+
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQS-------------------------------GQAS 188
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EAL LF + P +T +LL A GRQ H +K+G + ++
Sbjct: 189 EALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY------DMNVH 242
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VG+SL+DMY + + + IF ++ ++ VSWNA+I G A+ G G + LF +ML G
Sbjct: 243 VGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQG 302
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+P H T VL AC+ +G +E+G+ + + K G P+ ++D+ ++G + +A
Sbjct: 303 FEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDA 360
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVH 573
K + + Q D V W S+++ H
Sbjct: 361 KKVFRRLVKQ-DIVSWNSIISGYAQH 385
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 19/239 (7%)
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
S+ P + +LN C L L+ GR H H+ S E D+ + N +++MY KC
Sbjct: 100 SLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQS------STFEDDLVLLNFILNMYAKC 153
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+E+ +F+ M +D VSW +I G +Q+G +EAL LF KML G +P+ T+ +L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
A GR+ + S ++G + ++D+ R + EAK + ++ + +
Sbjct: 214 KASGTGPSDHHGRQ-LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-N 271
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEI-----EPSN---SGPYVLLSNMYAELGRW 610
V W +L+A H GE+V + ++ EP++ S S+ E G+W
Sbjct: 272 VVSWNALIAG---HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKW 327
>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
Length = 762
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/594 (37%), Positives = 335/594 (56%), Gaps = 38/594 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V N+++ K GFI A R+F MP RD ++N+M+ G ++ R EAL F M
Sbjct: 167 SVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMR 226
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E S ++F S L+ G VD +G Q+H L ++ S +V++ +AL+D Y KC +
Sbjct: 227 REGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLG 286
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
+++FD M ER+ VS+N +I+ N AL++F M G + + AS++S
Sbjct: 287 DLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAG 346
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+L K G QIHA+L+ D V GNAL+DMY+KCG L+ A+ +F
Sbjct: 347 ALPHIKIGRQIHAQLILHGLTLEDFV-GNALIDMYSKCGMLDAAKTIF------------ 393
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+ KS ++ +SW ALI G QNG+NEEAL LF ++R + P
Sbjct: 394 ----------AYKS---------DKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSP 434
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +++ + ++LA + +GRQ H ++ K SG +F G++L+DMY KCG ++
Sbjct: 435 DRATCSSIMKSSSSLAVIGIGRQLHAYLTK------SGHMPSVFSGSALLDMYAKCGCLD 488
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ R F M E++ ++WNA+I AQ G A+ +F ML CG PD VT + VL AC
Sbjct: 489 EAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACG 548
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GL EE KYF M + ++P K+HY+C++D LGRAGC D+ + +I+ MP + D +IW
Sbjct: 549 HNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIW 608
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
S+L +C+++ N L A+KL + P+++ YV+LSN+YA+ G W RV+K+MR R
Sbjct: 609 SSILHSCRIYGNQDLATVAAEKLFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDR 668
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
GV K+ G SW+EI + +F D +P+ EI L+ L EM + GY P+ S
Sbjct: 669 GVKKESGNSWVEIKQKIYMFSSNDHTNPMIDEIKKELERLYEEMDKQGYEPDTS 722
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 247/530 (46%), Gaps = 47/530 (8%)
Query: 43 ARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW---NSIITGLLKWG 99
AR++K+ + ++ G L ARKV D++ K+ N I+ G +
Sbjct: 26 ARMVKAGSDPATYRLELHLNYLVSSGRLAAARKVLDQVPEKSTLYLRFLNRILLGCSRSC 85
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+ A LF++ R+ +W M+ R S+A+ F M E A + + +
Sbjct: 86 DLSAAKALFSAAARRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVL 145
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
G +GT +H +++K + + V + + L+D Y K G ++ ARRVF M R+ ++
Sbjct: 146 NVPGC---DVGT-LHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSIT 201
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+N++I + G +ALE+F M G++ T +S+++ + G QIH +
Sbjct: 202 YNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFV 261
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
R N V NAL+D Y+KC L + + +FD M
Sbjct: 262 RANPSCNVFV-NNALLDFYSKCDSLGDLKQLFDEMS------------------------ 296
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
ER+ VS+N +I+ + N AL LFR ++ + +LL+ L
Sbjct: 297 -------ERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALP 349
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+++GRQ H ++ HGL + FVGN+LIDMY KCG ++ IF ++ +S
Sbjct: 350 HIKIGRQIHAQLILHGLTL------EDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAIS 403
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W A+I GC QNG EAL LF M G PD T ++ + S ++ GR+ + ++
Sbjct: 404 WTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLT 463
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
K G P + ++D+ + GCLDEA MP + +++ W ++++A
Sbjct: 464 KS-GHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMP-EKNSITWNAVISA 511
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 178/343 (51%), Gaps = 36/343 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R++H +++ + +F+ N L+D Y+KC L +++FD+MS ++ ++N +I+
Sbjct: 254 RQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISA---- 309
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
CSWN G AL F M + F + S L
Sbjct: 310 ------------------CSWNR-CGGM--------ALQLFRDMQTLGFDRRTLPYASLL 342
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
S K+G Q+HA L + + ++G+ALIDMY KCG + A+ +F ++ +
Sbjct: 343 SVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAI 402
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW +LIT QNG +AL++F M +G+ PD T +S++ + +SLA G Q+HA L
Sbjct: 403 SWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYL 462
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ + + + G+AL+DMYAKCG L+EA F+ MP +N ++ +++S YA+ K+A
Sbjct: 463 TKSGHMPS-VFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNA 521
Query: 339 RLMFTKMLE----RNVVSWNALIAGYTQNGENEEALGLFRLLK 377
MF ML + V++ +++A NG EE + F L++
Sbjct: 522 IRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMR 564
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 175/373 (46%), Gaps = 51/373 (13%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A LL + R++HA++I E F+ N LID+Y+KCG L A+ +F
Sbjct: 337 PYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKTIFAYK 396
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASM------PERDQCSWNSMVSGFAQHDRFSE 134
S+K +W ++ITG ++ G ++A +LF M P+R CS
Sbjct: 397 SDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKS----------- 445
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
S+ A G +G Q+HA L+KS + V+ GSAL+D
Sbjct: 446 ---------------------SSSLAVIG-----IGRQLHAYLTKSGHMPSVFSGSALLD 479
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG + A R F+ M E+N ++WN++I+ Y Q G A +A+ +F M+ G+ PD VT
Sbjct: 480 MYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVT 539
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
SV++AC +E ++ + + + ++D + G ++ + V D M
Sbjct: 540 FLSVLAACGHNGLAEECMKYFDLMRYYYSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEM 599
Query: 315 P------IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
P I + + + + G ++V + +L FT M+ + ++ L Y + G E
Sbjct: 600 PFEDDPIIWSSILHSCRIYGNQDLATVAAEKL-FT-MVPTDATAYVILSNIYAKAGNWEG 657
Query: 369 ALGLFRLLKRESV 381
A + ++++ V
Sbjct: 658 AARVKKIMRDRGV 670
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 120/270 (44%), Gaps = 49/270 (18%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R++HA + KS +F + L+D+YAKCGCL A + F++M KN TWN++I+ ++
Sbjct: 456 RQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISAYAQY 515
Query: 99 GFIDDASRLFASMPE----RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
G +A R+F SM D ++ S+++ + E + YF M +++S +
Sbjct: 516 GQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYY-YSMSPW-- 572
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR- 213
K Y S +ID G+ G ++V D M
Sbjct: 573 ------------------------KEHY-------SCVIDTLGRAGCFDKIQKVIDEMPF 601
Query: 214 ERNIVSWNSLI-TC--YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
E + + W+S++ +C Y A+ A E M+ P + T ++S + A E
Sbjct: 602 EDDPIIWSSILHSCRIYGNQDLATVAAEKLFTMV-----PTDATAYVILSNIYAKAGNWE 656
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
G ++MR ++ + GN+ V++ K
Sbjct: 657 GAARVKKIMRDRGVKKE--SGNSWVEIKQK 684
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/599 (38%), Positives = 340/599 (56%), Gaps = 38/599 (6%)
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K+ + NVF +++ K G I DA R+F MP R+ SW +MVSG+A E
Sbjct: 148 KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEE 207
Query: 135 ALGYFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A F M E +E+ + LSA + + +G Q+H L+ K V + ++L+
Sbjct: 208 AFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLV 267
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY K + A VF +ERN ++W+++IT Y QNG A A +F++M ++G P E
Sbjct: 268 TMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEF 327
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +++A + + A G Q H +++ + + +ALVDMYAKCG +A+
Sbjct: 328 TFVGILNASSDMGALVVGKQAHGLMVKL-GFERQVYVKSALVDMYAKCGCTGDAK----- 381
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
G+ + V +VV W A+I G+ QNGE+EEAL L+
Sbjct: 382 -------------DGFHQLYDVD------------DVVIWTAMITGHVQNGEHEEALMLY 416
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ +E V P++ T ++L ACA LA L+ G+Q H ++K G L G VG +L
Sbjct: 417 SRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFG-LGGS-----VGTALS 470
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY KCG++ED +F M +RD +SWN++I G +Q+G G +AL LF++M L G PDH+
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHI 530
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T I VLCACSH GLV+ G YF +MSK++GL P DHY C+VD+L RAG L EAK IE+
Sbjct: 531 TFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIES 590
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
+ + +W +L AC+ R+ +G Y ++L+E+ +S Y+LLSN+YA +W +V
Sbjct: 591 ITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDV 650
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
RVR LMR RGV K PGCSW+E+ VNVF+V +++HP ++I + L L + MK GY
Sbjct: 651 ERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHMKDEGY 709
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 236/476 (49%), Gaps = 50/476 (10%)
Query: 107 LFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL--SEYSFGSALSACA 162
+FA +P RD SWNS+++ ++H + AL +F M S A+ + +SF + +A A
Sbjct: 73 VFADIPAGLRDVASWNSLLNPLSRHQPLA-ALSHFRSMMSSTDAVLPTPHSFAAVFTAAA 131
Query: 163 GSVDFKMGTQVHAL---LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
G HA L S S++V++ +AL++MY K G +S ARRVFD M RN VS
Sbjct: 132 RVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVS 191
Query: 220 WNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
W ++++ Y + +A E+F M+ +E +E +V+SA + G+Q+H +
Sbjct: 192 WAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLV 251
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + L + + N+LV MYAK ++ A VF RN ++ ++M++GYA
Sbjct: 252 LK-DGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYA-------- 302
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
QNGE + A +F + PT +TF +LNA +++
Sbjct: 303 -----------------------QNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDM 339
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDW 457
L +G+QAH +VK G E ++V ++L+DMY KCG D F + + D
Sbjct: 340 GALVVGKQAHGLMVKLGF------ERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDV 393
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V W AMI G QNG EAL L+ +M G P ++T+ VL AC+ +E G++ +
Sbjct: 394 VIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQ 453
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ K G T + + + G L+++ + MP + D + W S+++ H
Sbjct: 454 ILK-CGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDR-DIISWNSIISGFSQH 507
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C ++ +++HA+I+K F + L +Y+KCG L + VF +M +++
Sbjct: 434 VLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRD 493
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ +WNSII SGF+QH R +AL F +M
Sbjct: 494 IISWNSII-------------------------------SGFSQHGRGRDALDLFEEMKL 522
Query: 145 ENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
E A +F + L AC+ G VD F+ ++ + L+ K D Y + ++D+
Sbjct: 523 EGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPK----LDHY--ACIVDILS 576
Query: 198 KCGRVSCARRVFDGM 212
+ G++ A+ + +
Sbjct: 577 RAGQLKEAKDFIESI 591
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 370/660 (56%), Gaps = 75/660 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKC-GCLYGARKVFDK 79
FA +C ++ VS + +IK+ + S++ + LID++ K G L A KVF+K
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M +N TW +IT L+++G+ +A LF M + SG+ + DRF
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDM----------IFSGY-EPDRF------- 272
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ +SACA +G Q+H+ + + D +G LI+MY KC
Sbjct: 273 -------------TLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 200 ---GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA-SDALEVFVRMMASGIEPDEVTL 255
G + AR++FD + + N+ SW ++IT Y Q G +AL++F M+ + + P+ T
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S + ACA+LAA + G Q+ ++ + V N+L+ MYA+ G++++AR FD +
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNCV-ANSLISMYARSGRIDDARKAFDILF 438
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+N++S +++ YAK N +EEAL LF
Sbjct: 439 EKNLISYNTVIDAYAK-------------------------------NLNSEEALELFNE 467
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ + + + +TF +LL+ A++ + G Q H V+K GL+ V N+LI M
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS------VCNALISM 521
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y +CG++E ++FE M +R+ +SW ++I G A++G+ T+AL LF KML G +P+ VT
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTY 581
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I VL ACSH GLV EG K+F SM EHG+ P +HY C+VD+LGR+G L EA I +MP
Sbjct: 582 IAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMP 641
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ DA++W + L AC+VH N+ LG++ AK ++E EP + Y+LLSN+YA + +W EV
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSN 701
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+RK M+++ ++K+ GCSW+E+ V+ F V D HP EIY L+ L+ ++K++GYVPN
Sbjct: 702 IRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPN 761
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 276/573 (48%), Gaps = 74/573 (12%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
+++ +V + D ++ L C+R++S VH ++ +S + N LI +Y+
Sbjct: 53 TLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYS 112
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG A +F RL S RD SW++MVS
Sbjct: 113 KCGQWEKATSIF----------------------------RLMGS--SRDLISWSAMVSC 142
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SS 184
FA ++ AL FV M + +EY F +A AC+ + +G + + K+ Y S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202
Query: 185 DVYMGSALIDMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
DV +G LIDM+ K G + A +VF+ M ERN V+W +IT Q G A +A+++F+ M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC-- 301
+ SG EPD TL+ V+SACA++ G Q+H++ +R L D +G L++MYAKC
Sbjct: 263 IFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSV 321
Query: 302 -GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G + AR +FD++ NV S T+M++GY +
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQ----------------------------- 352
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+ G +EEAL LFR + V P H+TF + L ACANLA L++G Q TH VK G ++
Sbjct: 353 -KGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
V NSLI MY + G ++D + F+ + E++ +S+N +I A+N EAL LF
Sbjct: 412 C------VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
++ G T +L + G + +G + + + K GL + ++ + R
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSR 524
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
G ++ A + E M + + W S++ H
Sbjct: 525 CGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 196/379 (51%), Gaps = 41/379 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + ++ +C + + +++H++ I+ + + LI++YAKC G + AR
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K+FD++ + NVF+W ++ITG ++ G D+ E
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDE------------------------------E 359
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F M + + ++F S L ACA ++G QV K +SS + ++LI
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + GR+ AR+ FD + E+N++S+N++I Y +N + +ALE+F + G+ T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++S AS+ +G QIHAR+++ L+ + + NAL+ MY++CG + A VF+ M
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIK-SGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEAL 370
RNV+S TS+++G+AK A +F KMLE V V++ A+++ + G E
Sbjct: 539 EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGW 598
Query: 371 GLFRLLKRE-SVCP--THY 386
F+ + E V P HY
Sbjct: 599 KHFKSMYTEHGVIPRMEHY 617
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 144/314 (45%), Gaps = 40/314 (12%)
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
NG A+ M+ G PD T + + C +F G +H +L + + L+ D
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSD-LQLDS 101
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
V N+L+ +Y+KCG+ +A +F M R+++S ++MVS +A + A L F M+E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
GY P Y F AC+ + +G
Sbjct: 162 N----------GYY---------------------PNEYCFAAATRACSTAEFVSVGDSI 190
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC-GSVEDGCRIFETMVERDWVSWNAMIVG 466
V+K G +SD+ VG LIDM++K G + ++FE M ER+ V+W MI
Sbjct: 191 FGFVIKTGYL-----QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
Q GY EA+ LF M+ G +PD T+ GV+ AC++ L+ G++ S + HGL
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQ-LHSQAIRHGLTL 304
Query: 527 LKDHYTCMVDLLGR 540
+ C++++ +
Sbjct: 305 DRCVGCCLINMYAK 318
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 370/660 (56%), Gaps = 75/660 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKC-GCLYGARKVFDK 79
FA +C ++ VS + ++K+ + S++ + LID++ K G L A KVF+K
Sbjct: 171 FAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEK 230
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M +N TW +IT L+++G+ +A LF M ++SG+ + DRF
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEM----------ILSGY-EPDRF------- 272
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+ +SACA +G Q+H+ + + D +G LI+MY KC
Sbjct: 273 -------------TLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 200 ---GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA-SDALEVFVRMMASGIEPDEVTL 255
G + AR++FD + + N+ SW ++IT Y Q G +AL++F M+ + + P+ T
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S + ACA+LAA + G Q+ ++ + V N+L+ MYA+ G++++AR FD +
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNCV-ANSLISMYARSGRIDDARKAFDILF 438
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+N++S +++ YAK N +EEAL LF
Sbjct: 439 EKNLISYNTVIDAYAK-------------------------------NLNSEEALELFNE 467
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ + + + +TF +LL+ A++ + G Q H V+K GL+ V N+LI M
Sbjct: 468 IEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS------VCNALISM 521
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y +CG++E ++FE M +R+ +SW ++I G A++G+ T+AL LF KML G +P+ VT
Sbjct: 522 YSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTY 581
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I VL ACSH GLV EG K+F SM EHG+ P +HY CMVD+LGR+G L EA I +MP
Sbjct: 582 IAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMP 641
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ DA++W + L AC+VH N+ LG++ AK ++E EP + Y+LLSN+YA +W EV
Sbjct: 642 YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSN 701
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+RK M+++ ++K+ GCSW+E+ V+ F V D HP EIY L+ L+ ++K++GYVPN
Sbjct: 702 IRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPN 761
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 275/573 (47%), Gaps = 74/573 (12%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
+++ +V + D ++ L C+R++S VH ++ +S + N LI +Y+
Sbjct: 53 TLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYS 112
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG A +F M + RD SW++MVS
Sbjct: 113 KCGQWEKATSIFQLMGSS------------------------------RDLISWSAMVSC 142
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SS 184
FA ++ AL FV M + +EY F +A AC+ + +G + + K+ Y S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS 202
Query: 185 DVYMGSALIDMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
DV +G LIDM+ K G + A +VF+ M ERN V+W +IT Q G A +A+++F+ M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM 262
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC-- 301
+ SG EPD TL+ V+SACA++ G Q+H++ +R L D +G L++MYAKC
Sbjct: 263 ILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAKCSV 321
Query: 302 -GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G + AR +FD++ NV S T+M++GY +
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQ----------------------------- 352
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+ G +EEAL LFR + V P H+TF + L ACANLA L++G Q TH VK G ++
Sbjct: 353 -KGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
V NSLI MY + G ++D + F+ + E++ +S+N +I A+N EAL LF
Sbjct: 412 C------VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
++ G T +L + G + +G + + + K GL + ++ + R
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS-GLKLNQSVCNALISMYSR 524
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
G ++ A + E M + + W S++ H
Sbjct: 525 CGNIESAFQVFEDME-DRNVISWTSIITGFAKH 556
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 41/379 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + ++ +C + + +++H++ I+ + + LI++YAKC G + AR
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K+FD++ + NVF+W ++ITG ++ G D+ E
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDE------------------------------E 359
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F M + + ++F S L ACA ++G QV K +SS + ++LI
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + GR+ AR+ FD + E+N++S+N++I Y +N + +ALE+F + G+ T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++S AS+ +G QIHAR+++ L+ + + NAL+ MY++CG + A VF+ M
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIK-SGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEAL 370
RNV+S TS+++G+AK A +F KMLE N+V++ A+++ + G E
Sbjct: 539 EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGW 598
Query: 371 GLFRLLKRE-SVCP--THY 386
F+ + E V P HY
Sbjct: 599 KHFKSMYTEHGVIPRMEHY 617
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 40/314 (12%)
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
NG A+ M+ G PD T + + C +F G +H +L + + L+ D
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSD-LQLDS 101
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
V N+L+ +Y+KCG+ +A +F M R+++S ++MVS +A + A L F M+E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
GY P Y F AC+ + +G
Sbjct: 162 N----------GYY---------------------PNEYCFAAATRACSTAEFVSVGDSI 190
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC-GSVEDGCRIFETMVERDWVSWNAMIVG 466
VVK G +SD+ VG LIDM++K G + ++FE M ER+ V+W MI
Sbjct: 191 FGFVVKTGYL-----QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
Q GY EA+ LF +M+L G +PD T+ GV+ AC++ L+ G++ S + HGL
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQ-LHSQAIRHGLTL 304
Query: 527 LKDHYTCMVDLLGR 540
+ C++++ +
Sbjct: 305 DRCVGCCLINMYAK 318
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 335/606 (55%), Gaps = 66/606 (10%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F + E + WN+M+ G A L +V+M S + Y+F L +CA
Sbjct: 36 AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----------------VSC--- 204
S F+ G Q+HA + K D Y ++LI MY + GR VSC
Sbjct: 96 SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155
Query: 205 ------------ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
AR+VFD + ER++VSWN++IT Y +N +ALE+F MM + + PDE
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
TL SV+SACA + + G +IH + + L + NA + +Y+KCG + A +F+
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ ++V VSWN LI GYT +EAL L
Sbjct: 276 GLSCKDV-------------------------------VSWNTLIGGYTHMNLYKEALLL 304
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K L G + + SL
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKR----LKGVTNGSALRTSL 360
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F +M+ + SWNAMI G A +G A LF +M G +PD
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T++G+L ACSH+GL++ GR F S+++++ + P +HY CM+DLLG AG EA+ +I
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIH 480
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM+PD VIW SLL ACK+H N+ L E A+KL+EIEP NSG YVLLSN+YA GRW +
Sbjct: 481 MMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWED 540
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R+R+++ +G+ K PGCS IEI V+ F++ DK HP ++EIY +L+ + ++ G+
Sbjct: 541 VARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGF 600
Query: 673 VPNASD 678
VP+ S+
Sbjct: 601 VPDTSE 606
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 227/453 (50%), Gaps = 39/453 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC +SK+ + R++HA+++K + + LI +YA+ G L ARKVFD S
Sbjct: 86 FPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSS 145
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V + ++ITG G + A ++F + ERD SWN+M++G+ ++ + EAL F +
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMYGKCG 200
M N E + S LSACA S ++G ++H L+ + S + + +A I +Y KCG
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
V A +F+G+ +++VSWN+LI Y +AL +F M+ SG P++VT+ SV+
Sbjct: 266 DVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 325
Query: 261 ACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA L A G IH + R + + N L +L+DMYAKCG + A VF+ M +++
Sbjct: 326 ACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSL 385
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S +M+ G+A +G A LF +++
Sbjct: 386 SSWNAMIFGFA-------------------------------MHGRANAAFDLFSRMRKN 414
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P T LL+AC++ L LGR H+ K + + G +ID+
Sbjct: 415 GIEPDDITLVGLLSACSHSGLLDLGR----HIFKSVTQDYNITPKLEHYG-CMIDLLGHA 469
Query: 440 GSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G ++ I M +E D V W +++ C +G
Sbjct: 470 GLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHG 502
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 368/683 (53%), Gaps = 73/683 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARK 75
LD A+ L S S+ +++H K S + + NRL+ +Y +CG + A K
Sbjct: 3 LDLQNLARFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHK 62
Query: 76 VFDKMSNKNVFTWNSIITGLLK---------------------W----------GFIDDA 104
+FD+M ++N F+WN++I G +K W G ++ A
Sbjct: 63 LFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIA 122
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS---EYSFGSALSAC 161
RLF MP R+ WNSM+ +A++ EA+ F +++ + S + + + AC
Sbjct: 123 RRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGAC 182
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN----- 216
+ + G Q+HA + D + S+LI++YGKCG + A V + M E +
Sbjct: 183 TDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLS 242
Query: 217 --------------------------IVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+V WNSLI+ Y N +A +F M G++
Sbjct: 243 ALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKV 302
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D TLA+++SAC+SL + G Q+HA + L D V+ +A +D Y+KCG LN+A +
Sbjct: 303 DFSTLATILSACSSLCNSQHGKQMHAYACKV-GLICDNVVASAFIDAYSKCGSLNDACKL 361
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F + + + SM++ Y+ + ++ A+ +F M ++++SWN++I G +QNG EAL
Sbjct: 362 FSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEAL 421
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ + + + ++++ACA+++ L+LG Q GL +SD +
Sbjct: 422 DLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGL------DSDEVIST 475
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SL+D Y KCG +E G ++F+TM++ D +SWN+M++G A NG+G EAL LF +M G +P
Sbjct: 476 SLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRP 535
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+T GVL AC H GLV+EG ++F+ M ++ + P +HY+CMVDL RAGCL+EA L
Sbjct: 536 TEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNL 595
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ MP + DA +W S+L C H LGE VA++++E++P NSG YV LS+++A G W
Sbjct: 596 IKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDW 655
Query: 611 GEVVRVRKLMRKRGVVKQPGCSW 633
VRK+M++R V K PG SW
Sbjct: 656 ESSALVRKVMQERQVQKYPGYSW 678
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 223/497 (44%), Gaps = 81/497 (16%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D + D+ A ++ +C + +++HARI+ + + + LI++Y KCG L
Sbjct: 166 DKSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDS 225
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A V + M + F+ +++ITG G ++DA R F WNS++SG+ ++
Sbjct: 226 AHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEE 285
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA F M + + + + LSAC+ + + G Q+HA K D + SA
Sbjct: 286 IEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAF 345
Query: 193 IDMYGKC-------------------------------GRVSCARRVFDGMRERNIVSWN 221
ID Y KC G++ A+++F+ M ++++SWN
Sbjct: 346 IDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWN 405
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
S+I QNG +AL++F M + + L SV+SACAS+++ + G QI AR
Sbjct: 406 SMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFAR-ATV 464
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
L +D V+ +LVD Y KCG + R +FD M + +S SM+ GYA
Sbjct: 465 VGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYAT---------- 514
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
NG EAL LF ++ V PT TF +L+AC
Sbjct: 515 ---------------------NGHGLEALTLFNEMRHAGVRPTEITFTGVLSAC------ 547
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVG------NSLIDMYMKCGSVEDGCRIFETM-VE 454
H +VK G R+ + + D + + ++D++ + G +E+ + + M E
Sbjct: 548 -----DHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFE 602
Query: 455 RDWVSWNAMIVGCAQNG 471
D W++++ GC +G
Sbjct: 603 ADASMWSSVLRGCMAHG 619
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/717 (34%), Positives = 372/717 (51%), Gaps = 126/717 (17%)
Query: 39 RRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
R +H R+++ + + N L+ +Y++CG + AR VFD M GL
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR------------GL-- 113
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
RD SW +M S A++ +L +M + Y+ +A
Sbjct: 114 ----------------RDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAA 157
Query: 158 LSAC------------AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
AC + KMG + +DV +GSALIDM + G ++ A
Sbjct: 158 AHACFPHELYCLVGGVVLGLVHKMGL----------WGTDVAVGSALIDMLARNGDLASA 207
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VFDG+ E+ +V W LI+ Y Q A +A+E+F+ + G EPD T++S++SAC L
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTEL 267
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG---KLNEARCVFDRMPIRNVVSE 322
+ + GLQ+H+ +R L +D + LVDMYAK ++ A VF+RMP +V+S
Sbjct: 268 GSVRLGLQLHSLALRM-GLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISW 326
Query: 323 TSMVSGYAKASSVKSARLM--FTKMLERNV----VSW----------------------- 353
T+++SGY + S V+ ++M F +ML ++ +++
Sbjct: 327 TALISGYVQ-SGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHV 385
Query: 354 ------------NALIAGYTQNGENEEALGLFRLLKRESVCP------------------ 383
NAL++ Y ++G EEA +F L S+ P
Sbjct: 386 IKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMD 445
Query: 384 ---THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ TF +L++A A++ L G+Q H +K G SD FV NSL+ MY +CG
Sbjct: 446 VGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGF------GSDRFVSNSLVSMYSRCG 499
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ED CR F + +R+ +SW +MI G A++GY AL LF M+L G KP+ VT I VL
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH GLV EG++YF SM ++HGL P +HY CMVDLL R+G + EA I MP++ DA
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADA 619
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++W +LL AC+ H NI +GE AK ++E+EP + PYVLLSN+YA+ G W EV R+R M
Sbjct: 620 LVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAM 679
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R + K+ G SW+E+ + F D HP ++IY L L R++K +GYVP+ S
Sbjct: 680 RDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTS 736
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 168/364 (46%), Gaps = 64/364 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG---CLYGAR 74
D + ++ +C SV ++H+ ++ AS+ + L+D+YAK + A
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYAN 312
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFI--------------------------------- 101
KVF++M +V +W ++I+G ++ G
Sbjct: 313 KVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASI 372
Query: 102 ---DDASRLFASMPERDQCS----WNSMVSGFAQHDRFSEALGYFVKMHSE--------- 145
D ++ A + + +Q S N++VS +A+ EA F +++
Sbjct: 373 SDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCITEG 432
Query: 146 ------------NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ +S +F S +SA A G Q+HA+ K+ + SD ++ ++L+
Sbjct: 433 RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLV 492
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +CG + A R F+ +++RN++SW S+I+ ++G A AL +F M+ +G++P++V
Sbjct: 493 SMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDV 552
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +V+SAC+ + +EG + + R L + +VD+ A+ G + EA +
Sbjct: 553 TYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINE 612
Query: 314 MPIR 317
MP++
Sbjct: 613 MPLK 616
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
R V+ VG + SS FA L+ + ++ +++HA +K+ F S+ F+ N L+ +
Sbjct: 439 HRIVRMDVG----ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSM 494
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
Y++CG L A + F+++ ++NV +W S+I+GL K G+ + A LF M
Sbjct: 495 YSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDM 542
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/691 (33%), Positives = 364/691 (52%), Gaps = 94/691 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA LL SC + +S +VHA +K+ ++ + L+D+Y KC L
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL------- 200
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DDA F MPER+ SW S ++G Q++++ L
Sbjct: 201 ------------------------DDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLE 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M +S+ S+ SA +CA G Q+HA K+++SSD +G+A++D+Y
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K ++ ARR F G+ + + S+A+ V + M+ S I D V+L+
Sbjct: 297 KANSLTDARRAFFGLPNHTVET--------------SNAMMVGLFMIRSSIRFDVVSLSG 342
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V SACA + G Q+H ++ +++D+Y KC L EA +F M +
Sbjct: 343 VFSACAETKGYFPGQQVHCLAIK------------SVLDLYGKCKALMEAYLIFQGMKQK 390
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLE------------------------------ 347
+ VS ++++ + L F +ML
Sbjct: 391 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIG 450
Query: 348 -RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+ VVSWNA+++G++ N E+E A F + + P H+TF +L+ CANLA ++LG+Q
Sbjct: 451 GQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 510
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H ++K + D ++ ++L+DMY KCG + D +FE + +RD+VSWNAMI G
Sbjct: 511 IHGQIIKQEML------DDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICG 564
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A +G G EAL +F++M P+H T + VL ACSH GL ++G +YF M+ + L P
Sbjct: 565 YALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEP 624
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+H+ CMVD+LGR+ EA I +MP Q DAVIW +LL+ CK+ +++ + E A +
Sbjct: 625 QLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNV 684
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
L ++P +S Y+LLSN+YAE G+W +V R R+L+++ + K+PGCSWIE ++ F+V
Sbjct: 685 LLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEAQSEMHGFLVG 744
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
DK HP + E+Y +L L EMK GY P+++
Sbjct: 745 DKAHPRSGELYEMLNDLIGEMKLSGYEPDSA 775
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 154/311 (49%), Gaps = 12/311 (3%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARL---MRCEKLRNDLVLGNALVDMYAKCGKL 304
+ P VT + V +CA A +E L M + N L+ MYA+C
Sbjct: 11 VAPARVTFSRVFQSCAQ--AGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGA 68
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
AR VFD MP R+ VS +M++ Y+ A + +A +F M + +VVSWNAL++GY Q G
Sbjct: 69 ACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 128
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+E++ LF + R V P TF LL +C+ L +L LG Q H VK GL E
Sbjct: 129 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGL------EI 182
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+ G++L+DMY KC S++D F M ER+WVSW + I GC QN L LF +M
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQ 242
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G + +C+ + GR+ + K + + + T +VD+ +A L
Sbjct: 243 RLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAKANSL 301
Query: 545 DEAKTLIEAMP 555
+A+ +P
Sbjct: 302 TDARRAFFGLP 312
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/655 (36%), Positives = 344/655 (52%), Gaps = 81/655 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC K+V+ ++V A+II F ++ ++ + + AR +FD
Sbjct: 70 FISLLRSC---KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF- 125
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P+ WN++ G+ + + E + F K
Sbjct: 126 ------------------------------PDPKVELWNAISRGYFHNAFYREVVFLFGK 155
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S + + ++F L +CA F G ++H + K + ++ + LID+Y
Sbjct: 156 MKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRA 215
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F GM ERNIV+W S+I+ Y I + V LA
Sbjct: 216 IGSAYKLFVGMLERNIVAWTSMISGY--------------------ILCNRVALAR---- 251
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
RL R D+VL N +V Y + G + AR +FD MP R+ +S
Sbjct: 252 ---------------RLFDLAPER-DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMS 295
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES 380
+M++GYA V++ +F +M ERNV SWN LI GY NG E L F R+L
Sbjct: 296 WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGL 355
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P T +L+ACA L L LG+ H + G + I+VGN+LIDMY KCG
Sbjct: 356 VVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFK------GSIYVGNALIDMYSKCG 409
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+E+ +FE+M +D ++WN+MI G A +G G +AL LF +M + GEKPD +T IGVLC
Sbjct: 410 LIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLC 469
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
+C+H GLVEEG YF+SM E+ +AP +HY CMVDL GRAG LD A ++ MPM+ DA
Sbjct: 470 SCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADA 529
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW +LL AC++++NI L E +KL+ +EP N YVLLSN+Y +LGRW +V R++ LM
Sbjct: 530 VIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILM 589
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R G K PGCS IE+ V F D+RH +KEIY VLK L + ++ GY PN
Sbjct: 590 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPN 644
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 192/472 (40%), Gaps = 82/472 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ 57
A R V + G + +D P F +L SC + + + +H +IK F+
Sbjct: 144 AFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA 203
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
LIDVY+ + A K+F M +N+ W S+I+G + + A RLF PERD
Sbjct: 204 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVV 263
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
WN MVSG+ + A F M
Sbjct: 264 LWNIMVSGYIEIGDMKAARKLFDTMPYR-------------------------------- 291
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
D + +++ Y G V ++F+ M ERN+ SWN LI Y NG + L
Sbjct: 292 -------DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVL 344
Query: 238 EVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
F RM+ G + P++ TL +V+SACA L A G +H + + +GNAL+D
Sbjct: 345 RCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATI-GFKGSIYVGNALID 403
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY+KCG + A VF+ M ++++++ SM+ G A
Sbjct: 404 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLA-------------------------- 437
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
+G +AL LF +K P TF +L +C +L ++ G +V
Sbjct: 438 -----THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNE-- 490
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D++ + G ++ + M +E D V W A++ C
Sbjct: 491 ---YSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGAC 539
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/580 (39%), Positives = 339/580 (58%), Gaps = 50/580 (8%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS+++ A+ EAL F M + + +F A+ +C+ +D G Q H
Sbjct: 119 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 178
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ D+++ SAL+DMY KCG + AR +FD + RNIVSW S+IT Y QN A AL
Sbjct: 179 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 238
Query: 238 EVFVRMMA--SGIEPD------EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
+F + SG E D + + SV+SAC+ ++ +H L++ DL
Sbjct: 239 LLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIK-RGFEGDLG 297
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ N L+D YAK + +R +F M ER+
Sbjct: 298 VENTLMD-------------------------------AYAKCGELGVSRRVFDGMAERD 326
Query: 350 VVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
V+SWN++IA Y QNG + E++ +F R++K + T +L ACA+ +LG+ H
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
V+K GL ES++FVG S+IDMY KCG VE + F+ M E++ SW+AM+ G
Sbjct: 387 DQVIKMGL------ESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 440
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G+ EAL +F +M + G KP+++T + VL ACSHAGL+EEG +F +MS E + P
Sbjct: 441 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGV 500
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+HY CMVDLLGRAG L EA LI+ M ++PD V+WG+LL AC++H+N+ LGE A+KL E
Sbjct: 501 EHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE 560
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++P N G YVLLSN+YA+ GRW +V R+R LM+ G+VK PG S ++I G V+VF+V D+
Sbjct: 561 LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDR 620
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPNASD---DEAYEEQ 685
HP +++IY L+ L+ +++ VGYVP+ + D +EE+
Sbjct: 621 EHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEK 660
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 228/455 (50%), Gaps = 68/455 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F + SC + R+ H + + F ++F+ + L+D+Y+KCG L AR +F
Sbjct: 151 NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 210
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++S++N+ +W S+ITG ++ DDA R E F + SE G
Sbjct: 211 DEISHRNIVSWTSMITGYVQ---NDDAHRALLLFKE------------FLVEESGSEGDG 255
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + S LSAC+ + + VH L K + D+ + + L+D Y
Sbjct: 256 --------EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYA 307
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLA 256
KCG + +RRVFDGM ER+++SWNS+I Y QNG +++++E+F RM+ G I + VTL+
Sbjct: 308 KCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 367
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+ ACA + + G IH ++++ L +++ +G +++DMY KCGK+ AR FDRM
Sbjct: 368 AVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 426
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+NV S ++MV+GY +G +EAL +F +
Sbjct: 427 KNVKSWSAMVAGYG-------------------------------MHGHAKEALEVFYEM 455
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLI 433
V P + TF ++L AC++ L+ G H + +S E E + ++
Sbjct: 456 NMAGVKPNYITFVSVLAACSHAGLLEEGW--------HWFKAMSHEFDVEPGVEHYGCMV 507
Query: 434 DMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
D+ + G +++ + + M R D+V W A++ C
Sbjct: 508 DLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 542
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 40/375 (10%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ SWNS+I ++G + +AL F M ++P+ T + +C++L G Q H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ + DL + +ALVDMY+KCG+L +AR +FD + RN+VS TSM++GY +
Sbjct: 176 QQAL-IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
A L+F + L +G +GE VC ++L+AC
Sbjct: 235 HRALLLFKEFLVEE--------SGSEGDGE---------------VCVDPIAMVSVLSAC 271
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ +++ + H ++K G E D+ V N+L+D Y KCG + R+F+ M ER
Sbjct: 272 SRVSEKSITEGVHGFLIKRGF------EGDLGVENTLMDAYAKCGELGVSRRVFDGMAER 325
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKY 514
D +SWN++I AQNG TE++ +F +M+ GE + VT+ VL AC+H+G G+
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
+ K GL T ++D+ + G ++ A+ + M + + W +++A +H
Sbjct: 386 HDQVIK-MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM-REKNVKSWSAMVAGYGMHG 443
Query: 575 NIMLGEYVAKKLLEI 589
+ AK+ LE+
Sbjct: 444 H-------AKEALEV 451
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 154/301 (51%), Gaps = 30/301 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D +L +C R S T VH +IK F ++ ++N L+D YAKCG L +R+V
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRV 318
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M+ ++V +WNSII + G ++ +F M + + ++N++
Sbjct: 319 FDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV-------------- 364
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ + L ACA S ++G +H + K S+V++G+++IDMY
Sbjct: 365 ----------------TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 408
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG+V AR+ FD MRE+N+ SW++++ Y +G A +ALEVF M +G++P+ +T
Sbjct: 409 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 468
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV++AC+ +EG + + + +VD+ + G L EA + M +
Sbjct: 469 SVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKL 528
Query: 317 R 317
R
Sbjct: 529 R 529
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 21/239 (8%)
Query: 341 MFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F K +++ NV SWN++IA ++G++ EAL F +++ S+ P TF + +C+ L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
DL GRQAH + G E D+FV ++L+DMY KCG + D +F+ + R+ VS
Sbjct: 167 DLHSGRQAHQQALIFGF------EPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVS 220
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLL--CGEKP------DHVTMIGVLCACSHAG--LVE 509
W +MI G QN AL LFK+ L+ G + D + M+ VL ACS +
Sbjct: 221 WTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSIT 280
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG F G +++ ++D + G L ++ + + M + D + W S++A
Sbjct: 281 EGVHGFLIKRGFEGDLGVEN---TLMDAYAKCGELGVSRRVFDGMA-ERDVISWNSIIA 335
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/544 (40%), Positives = 317/544 (58%), Gaps = 49/544 (9%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + +A++ +Y K G V R +FD M R+ VS+N++I+ + NG AL VF+RM
Sbjct: 88 DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G++P E T SV++AC L + G QIH R++ C L ++ + NAL D+YA+CG++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIIC-NLGGNVFVCNALTDLYARCGEI 206
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAK--------------------------------- 331
++AR +FDRM IRNVV+ M+SGY K
Sbjct: 207 DQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAY 266
Query: 332 --ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
A + AR +F ++ E++ V W +I G QNG+ E+AL LF + E+ P YT
Sbjct: 267 IQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTIS 326
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+++++CA LA L G+ V HG FL G D+ V ++L+DMY KCG D IF
Sbjct: 327 SVVSSCAKLASLYHGQ------VVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIF 380
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
TM R+ VSWN+MI G A NG EAL L++ ML KPD VT +GVL AC HAGLVE
Sbjct: 381 STMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVE 440
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EG++YF SMS +HGL P DHY CMV+L GR+G +D+A LI +M +P+++IW ++L+
Sbjct: 441 EGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSV 500
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C + +I GE A+ L+E+ P N+ PY++LSNMYA GRW +V +R LM+ + V K
Sbjct: 501 CVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFS 560
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-------DDEAY 682
SWIEI V+ F+ D+ HP K I++ L L R+++ G+ PN + +DE
Sbjct: 561 AYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKL 620
Query: 683 EEQN 686
E N
Sbjct: 621 ESIN 624
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 245/518 (47%), Gaps = 105/518 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
+ +L C R+ V +R+ + + F ++ FI NRL+++YAK G + ARK+FD+M
Sbjct: 25 YTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEM 84
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ ++ F+WN++++ K G ++D +F +MP RD S+N+++SGFA + R ALG F+
Sbjct: 85 TQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFL 144
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M E +EY+ S L+AC +D + G Q+H + +V++ +AL D+Y +CG
Sbjct: 145 RMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCG 204
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ ARR+FD M RN+V+WN +I+ Y +N +++F M S ++PD+VT +SV+
Sbjct: 205 EIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLG 264
Query: 261 A-------------------------------CA-------SLAAFKE---------GLQ 273
A CA +L F E G
Sbjct: 265 AYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYT 324
Query: 274 IHARLMRCEKL------------------RNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
I + + C KL +DL++ +ALVDMY KCG +A +F M
Sbjct: 325 ISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQ 384
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
RNVVS SM+ GYA NG++ EAL L+
Sbjct: 385 TRNVVSWNSMIGGYA-------------------------------LNGQDLEALSLYEN 413
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLID 434
+ E++ P TF +L+AC + ++ G++ + +HGL + +++
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYA------CMVN 467
Query: 435 MYMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNG 471
++ + G ++ + +M E + + W ++ C G
Sbjct: 468 LFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ D F N+++ +Y K G VED IF+ M RD VS+N +I G A NG G ALG+F +
Sbjct: 86 QRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLR 145
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL----KDHYTC--MVD 536
M G KP T + VL AC+ + G++ HG + + + C + D
Sbjct: 146 MQKEGLKPTEYTHVSVLNACTQLLDLRRGKQI-------HGRIIICNLGGNVFVCNALTD 198
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
L R G +D+A+ L + M ++ + V W +++
Sbjct: 199 LYARCGEIDQARRLFDRMVIR-NVVTWNLMISG 230
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ SC + S+ + VH + ++ + + L+D+Y KCG A +F
Sbjct: 321 DGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIF 380
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +NV +WN SM+ G+A + + EAL
Sbjct: 381 STMQTRNVVSWN-------------------------------SMIGGYALNGQDLEALS 409
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR---YSSDVYMGSALID 194
+ M EN +F LSAC + + G + +S + D Y + +++
Sbjct: 410 LYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHY--ACMVN 467
Query: 195 MYGKCGRVSCARRVFDGM-RERNIVSWNSLIT 225
++G+ G + A + M +E N + W ++++
Sbjct: 468 LFGRSGHMDKAVDLISSMSQEPNSLIWTTVLS 499
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 348/659 (52%), Gaps = 67/659 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D F ++ +C + + R++HA +IKS F + QN LI +Y G + A
Sbjct: 257 FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASN 316
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF ++ K++ +W ++ITG ++ G+ +A LF +
Sbjct: 317 VFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL------------------------ 352
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ + +E+ FGS SAC+ ++ + G QVH + K +V+ G +L DM
Sbjct: 353 ------LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDM 406
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + A+ F ++ +IVSWN++I + NG A++A++ F +M+ G+ PD +T
Sbjct: 407 YAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITY 466
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++ C S +G QIH+ +++ ++ + N+L+ MY KC L++A VF +
Sbjct: 467 ISLLCTCGSPVRLNQGRQIHSYIVKI-GFDKEITVCNSLLTMYTKCSHLHDALNVFRDIS 525
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
RN N+VSWNA+++ Q + E L++
Sbjct: 526 -RNA-----------------------------NLVSWNAILSACLQKKQEGETFRLYKE 555
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P T LL CA L L +G Q H + +K GL D+ V N LIDM
Sbjct: 556 MHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLIL------DVSVCNGLIDM 609
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS++ +F++ D VSW+++IVG AQ G G EAL LF+ M G +P+ VT
Sbjct: 610 YAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTY 669
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+G L ACSH GLVEEG + + SM EHG+ P ++H++C+VDLL RAGCL EA+T I+
Sbjct: 670 LGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSG 729
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ D W +LLAACK H N+ + E A +L+++PSNS V+L N++A G W EV +
Sbjct: 730 LDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAK 789
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+RKLM++ GV K PG SWIE+ ++F +D HP IY +L+ L ++ GY P
Sbjct: 790 LRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 848
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 228/455 (50%), Gaps = 45/455 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
NS + + + EAL F + + N ++ S + ACA ++H +
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 186
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
KS Y + + + +I+MYGKCG + AR+VFD M+ N+VSW S+I+ Y QNG A+DA+
Sbjct: 187 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 246
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
++++M SG PD++T SV+ AC G Q+HA +++ + L NAL+ MY
Sbjct: 247 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIK-SWFGHHLTSQNALISMY 305
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
G++ A VF R+P ++++S +M++G
Sbjct: 306 TNFGQIEHASNVFTRIPTKDLISWGTMITG------------------------------ 335
Query: 359 GYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
Y Q G EAL LFR LL++ + P + FG++ +AC++L +L+ G+Q H VK GLR
Sbjct: 336 -YIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 394
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
++F G SL DMY K G + F + D VSWNA+I A NG EA+
Sbjct: 395 ------RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAI 448
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MV 535
F++M+ G PD +T I +LC C + +GR+ S + K + K+ C ++
Sbjct: 449 DFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVK---IGFDKEITVCNSLL 505
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+ + L +A + + + V W ++L+AC
Sbjct: 506 TMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 540
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/638 (36%), Positives = 358/638 (56%), Gaps = 36/638 (5%)
Query: 47 KSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASR 106
+S F+S I I +A+ G + AR +FD + +K V +WN+I+ G +A +
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
LF MPER+ SWN +VSG+ ++ SEA F KM N S S G V
Sbjct: 69 LFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV-------SWTSMVRGYVQ 121
Query: 167 FKMGTQVHALL----SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
+ + L K+ S V +G + D GRV ARR+FD + +++V+ +
Sbjct: 122 EGLIDEAELLFWRMPEKNVVSWTVMLGGLIED-----GRVDEARRLFDMIPVKDVVASTN 176
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA--AFKEGLQIHARLMR 280
+I G S+A E+F DE+ +VV+ + ++ A + + +L
Sbjct: 177 MIGGLCSEGRLSEAREIF----------DEMPQRNVVAWTSMISGYAMNNKVDVARKLFE 226
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+N+ V A++ Y + G++NEA +F MP++ V + M+ G+ V AR
Sbjct: 227 VMPDKNE-VTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARW 285
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F +M E++ +W+ALI Y + G EAL LF L++RE V P + ++L+ C +LA
Sbjct: 286 VFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLAS 345
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L GRQ H+ +V+ S + DI+V + LI MY+KCG + G R+F+ +D V W
Sbjct: 346 LDHGRQVHSQLVR------SHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMW 399
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N++I G AQ+G+G +AL +F +M G PD +T IGVL AC + G V+EG + F SM
Sbjct: 400 NSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKS 459
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
++ + +HY CMVDLLGRAG L+EA LIE MP++ DA++WG+LL+AC+ H+N+ L E
Sbjct: 460 KYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAE 519
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
AKKLL++EPS++GPY+LLSN+YA RW +V +RK MR R V K PGCSWIE+ V
Sbjct: 520 IAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKV 579
Query: 641 NVFM-VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++F HP ++ I L+ L ++ GY P+ S
Sbjct: 580 HMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGS 617
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 43 ARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFID 102
A + K+ + N +I + G + AR VFD+M K+ TW+++I + GF
Sbjct: 253 AELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGF-- 310
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
EAL F M E + S S LS C
Sbjct: 311 -----------------------------ELEALALFSLMQREGVRPNFPSIISILSVCG 341
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G QVH+ L +S + D+Y+ S LI MY KCG + +RVFD ++IV WNS
Sbjct: 342 SLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNS 401
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y Q+G ALEVF M +SG PDE+T V+SAC KEGL+I +
Sbjct: 402 IIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKY 461
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ +VD+ + GKLNEA + + MP+
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPV 495
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 35/205 (17%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VH+++++S F +I++ + LI +Y KCG L ++VFD+ S+K+
Sbjct: 336 ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKD 395
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ WNSII G +AQH +AL F +M S
Sbjct: 396 IVMWNSIIAG-------------------------------YAQHGFGEKALEVFHEMFS 424
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD--VYMGSALIDMYGKCGRV 202
A E +F LSAC + K G ++ + KS+Y D + ++D+ G+ G++
Sbjct: 425 SGAAPDEITFIGVLSACGYTGKVKEGLEIFESM-KSKYQVDQKTEHYACMVDLLGRAGKL 483
Query: 203 SCARRVFDGMR-ERNIVSWNSLITC 226
+ A + + M E + + W +L++
Sbjct: 484 NEAMNLIENMPVEADAIVWGALLSA 508
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 331/556 (59%), Gaps = 40/556 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF---- 209
+ S +S C + K+G +H+ K+ ++ + LID Y KC + A +VF
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 210 ---------------------------DGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
D M + N+VS+NSLI+ +G ++L VF
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 243 MMA--SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M+ S + DE TL S+V +CASL A + Q+H + L +++++GNAL+D Y K
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIII-GLNSNIIIGNALIDAYGK 195
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG+ + + +F RMP R+VVS TSMV+ YA+AS ++ A +F++M E+N VSW ALIAG+
Sbjct: 196 CGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGF 255
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG-LRFL 419
QNG +EAL LF ++ E + P+ +TF ++L+ACA+LA + G++ H H+++ + +
Sbjct: 256 AQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYF 315
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+IF+ N+LIDMY KCG + +F+ M E+D VSWN++I G AQNG+G E+L +
Sbjct: 316 C----NIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAV 371
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F++M+ +P+HVT +G+L AC H GLV EG + SM K++G+ P DHY M+DLLG
Sbjct: 372 FERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLG 431
Query: 540 RAGCLDEAKTLIEAMPMQPDAV-IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
R L+EA LI+ P D V +WG+LL AC++H N+ L A+ L ++EP N+ YV
Sbjct: 432 RNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYV 491
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
++ N+YA RW E +VR+LM +RG+ K+ CSWIE+ + F+ K++ H E+Y
Sbjct: 492 MVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYE 551
Query: 659 VLKMLTREMKRVGYVP 674
V+ L +M GY+P
Sbjct: 552 VIHNLVDQMYDSGYLP 567
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 235/528 (44%), Gaps = 106/528 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ L+ C+ ++ + + +H+ IK+ F+ NRLID Y+KC + A KVF +
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
KN +WN II+ + G ++A L MP+ + S+NS++SG H E+L F
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 142 MHSE--NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + N E++ S + +CA ++ QVH +S++ +G+ALID YGKC
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKC 196
Query: 200 G-------------------------------RVSCARRVFDGMRERNIVSWNSLITCYE 228
G R+ A +F M+E+N VSW +LI +
Sbjct: 197 GEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFA 256
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR--CEKLRN 286
QNG +AL +F +M GI P T ASV+SACA LA G +IH ++R C
Sbjct: 257 QNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFC 316
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ + NAL+DMY KCG++ A +F M +++VS S+++G+A
Sbjct: 317 NIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFA---------------- 360
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
QNG EE+L +F + + P H TF LL+AC
Sbjct: 361 ---------------QNGHGEESLAVFERMIEADIRPNHVTFLGLLSAC----------- 394
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
HT +V GLR L E D Y C + + MI
Sbjct: 395 CHTGLVSEGLRILDSMEKD----------YGVCPRSDH---------------YAIMIDL 429
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC-ACSHAGLVEEGRK 513
+N EA+GL K+ + DHV M G L AC G ++ R+
Sbjct: 430 LGRNNRLEEAMGLIKR---APKGSDHVGMWGALLGACRIHGNMDLARR 474
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 11/307 (3%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D L+ SC + R+VH I S I I N LID Y KCG +
Sbjct: 145 LFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFS 204
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+F +M ++V +W S++ + ++DA LF+ M E++ SW ++++GFAQ+ R EA
Sbjct: 205 IFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEA 264
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR---YSSDVYMGSAL 192
L F +M E S ++F S LSACA G ++H + +S Y ++++ +AL
Sbjct: 265 LHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNAL 324
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
IDMY KCG++ A +F GM E++IVSWNSLIT + QNG ++L VF RM+ + I P+
Sbjct: 325 IDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNH 384
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMR----CEKLRNDLVLGNALVDMYAKCGKLNEAR 308
VT ++SAC EGL+I + + C + + + ++D+ + +L EA
Sbjct: 385 VTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAI----MIDLLGRNNRLEEAM 440
Query: 309 CVFDRMP 315
+ R P
Sbjct: 441 GLIKRAP 447
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 43/359 (11%)
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
S ++P +S++S C + K G +H+ ++ + L N L+D Y+KC +
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTF-LANRLIDFYSKCDSIQ 66
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A VF +P++N S ++S Y+++ A + +M + N+VS+N+LI+G +G
Sbjct: 67 SAHKVFHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGF 126
Query: 366 NEEALGLFRLLKRE--SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
+E+L +F+ + ++ +V +T +L+ +CA+L +L RQ HG + G
Sbjct: 127 RKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQV------HGAAIIIGLN 180
Query: 424 SDIFVGNSLIDMYMKCGS-------------------------------VEDGCRIFETM 452
S+I +GN+LID Y KCG +ED +F M
Sbjct: 181 SNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQM 240
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
E++ VSW A+I G AQNG G EAL LF++M G P T VL AC+ L+ G+
Sbjct: 241 QEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGK 300
Query: 513 KYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + + + + ++D+ + G + A TL + M + D V W SL+
Sbjct: 301 EIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITG 358
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 316/532 (59%), Gaps = 7/532 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F + WN ++ G AQ D ++A+ ++ K +F L ACA
Sbjct: 40 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 99
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
G Q+H ++K SD+++ ++LI +Y CG + AR VFD M +++VSWNSL
Sbjct: 100 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSL 159
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y Q D L +F M G++ D+VT+ VVSAC L + R +
Sbjct: 160 ICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYC 218
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ D+ LGN LVD + + G+L A VF M +RN+V+ +M++ YAK + SAR +F
Sbjct: 219 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFD 278
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ +++++SW+++I+GY+Q +AL +FR ++R V P +++++CA+L L L
Sbjct: 279 QIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDL 338
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H +V ++ ++ +D + NSLIDMYMKCGS ++ ++F+ M E+D +SWN++
Sbjct: 339 GKWVHEYVRRNNIK------ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSI 392
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I+G A NG+ E+L LF+ ML G +P+ VT +GVL AC++A LVEEG +F SM + +
Sbjct: 393 IIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYS 452
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
L P HY C+VDLLGRAG L++A I MP+ PD V+W LL +C H ++ + E V
Sbjct: 453 LEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVT 512
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
KKL E+EPSNSG Y LLSN YA RW E + VR+ M V K PGCS +E
Sbjct: 513 KKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 218/486 (44%), Gaps = 100/486 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C R ++++ ++H I K S+IF+ N LI +YA CG L AR VF
Sbjct: 86 DNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVF 145
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M K+V +WNS+I G++Q +RF + L
Sbjct: 146 DEMVVKDVVSWNSLIC-------------------------------GYSQCNRFKDILA 174
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M +E + + +SAC D+ M + + DVY+G+ L+D +G
Sbjct: 175 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 234
Query: 198 KCGRVSCARRVFDGMRERNIV-------------------------------SWNSLITC 226
+ G++ A +VF M+ RNIV SW+S+I+
Sbjct: 235 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 294
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q SDALE+F +M + ++PD + +ASVVS+CA L A G +H + R ++
Sbjct: 295 YSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRR-NNIKA 353
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D ++ N+L+DMY KCG EA VF M
Sbjct: 354 DTIMENSLIDMYMKCGSAKEALQVFKEMK------------------------------- 382
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E++ +SWN++I G NG +E+L LF+ + E P TF +L ACAN ++ G
Sbjct: 383 EKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLD 442
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR-IFETMVERDWVSWNAMIV 465
H +K R S E G ++D+ + G +E R I E ++ D V W ++
Sbjct: 443 -HFESMK---RLYSLEPQMKHYG-CVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 497
Query: 466 GCAQNG 471
C +G
Sbjct: 498 SCNTHG 503
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/638 (37%), Positives = 356/638 (55%), Gaps = 72/638 (11%)
Query: 41 VHARIIKSQFA-SEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
VHA +I+S ++I I N LI++YAKCG
Sbjct: 410 VHAFLIRSGLLNAQIAIGNGLINMYAKCGA------------------------------ 439
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
I+DA +F M +D +WNSM++G Q+ +F EA+ F +M S ++ SALS
Sbjct: 440 -INDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALS 498
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
+CA +G Q+H K DV + +AL+ +YG+CG V ++ F M + + VS
Sbjct: 499 SCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVS 558
Query: 220 WNSLITCYEQNGPAS-DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
WNSLI + P+ +A+E F+ MM +G +P+ VT ++++A +SL+ + G QIHA +
Sbjct: 559 WNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALV 618
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ + D + NAL+ Y KCG + +F RM R
Sbjct: 619 LK-RNVAADTAIENALLACYGKCGDMGYCENIFSRMSDR--------------------- 656
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
++ VSWN++I+GY N +A+ + + ++ +TF +L+ACA +
Sbjct: 657 ---------QDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATV 707
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L+ G + H V+ L ESDI +G++L+DMY KCG ++ R FE M R+
Sbjct: 708 ATLERGMEVHGCSVRACL------ESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLY 761
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN+MI G A++G+GT++L LF +M L G PDHVT +GVL ACSHAGLV EG +F SM
Sbjct: 762 SWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSM 821
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNI 576
S+ +GLAP +H++CMVDLLGR G L++ + + MP++P+ +IW ++L AC RN
Sbjct: 822 SEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNT 881
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
LG A+ LLE+EP+N+ Y+LLSNMYA G+W +V + R MRK V K+ GCSW+ +
Sbjct: 882 ALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTM 941
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
V+VF+ DK HP IY LK L +M+ GY+P
Sbjct: 942 KDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIP 979
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 267/547 (48%), Gaps = 86/547 (15%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
D +H ++ K+ F +++F+ N LI++YA+ G L RKVFD+
Sbjct: 91 DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDE----------------- 133
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
MP R+ SW+ ++SG+ ++ +EA F KM S+ F + Y+FGS
Sbjct: 134 --------------MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGS 179
Query: 157 ALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC-GRVSCARRVFDGMR 213
+ AC G K G Q+H L+SK++Y +DV + LI MYG G V ARR FD +
Sbjct: 180 VIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIW 239
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRM----MASGIEPDEVTLASVVSACASLAAFK 269
RN+VS NS+I+ Y Q G A A ++F M M G++P+E T S++SA SLA
Sbjct: 240 PRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA--N 297
Query: 270 EGLQIHARLM-RCEK--LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
GL + +L+ R EK +DL +G+ALV
Sbjct: 298 SGLVLLEQLLTRVEKSGFLHDLYVGSALV------------------------------- 326
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
SG+AKA S+ A+ +F KM RNVVS N LI G + EEA+ LF +K +SV
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPN 385
Query: 387 TFGNLLNACANLADLQLGR----QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
++ +L A L+ G+ + H +++ GL + I +GN LI+MY KCG++
Sbjct: 386 SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL-----NAQIAIGNGLINMYAKCGAI 440
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
D C +F M +D V+WN+MI G QN EA+ F++M P + TMI L +C
Sbjct: 441 NDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSC 500
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ G + G + K GL ++ L G G + E + M + D V
Sbjct: 501 ASLGWISVGEQLHCEGLKL-GLDLDVSVSNALLALYGECGYVKECQKAFSLM-LDYDHVS 558
Query: 563 WGSLLAA 569
W SL+ A
Sbjct: 559 WNSLIGA 565
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 158/596 (26%), Positives = 278/596 (46%), Gaps = 70/596 (11%)
Query: 11 VGDLA----FLDSSPFAKLLD-SCL-----RSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
VGDL D P L+ SCL R++ ++ + +++ F + +
Sbjct: 121 VGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSV 180
Query: 61 IDVYAKCGCLYGAR------KVFDKMSNKNVFTWNSIITGLL--KWGFIDDASRLFASMP 112
I +CG YG + + K N T ++++ + G +D A R F S+
Sbjct: 181 IRACQECG-EYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIW 239
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE----NFALSEYSFGSALSACAGSVD-- 166
R+ S NSM+S + Q A F M E +EY+FGS +SA +
Sbjct: 240 PRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSG 299
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
+ Q+ + KS + D+Y+GSAL+ + K G + A+ +F M RN+VS N LI
Sbjct: 300 LVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIG 359
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF----KEGLQIHARLMRCE 282
+ +A+E+F+ M S +E + + +++A ++G ++HA L+R
Sbjct: 360 LVRQKRGEEAVELFMEMKDS-VELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSG 418
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + +GN L++MYAKCG +N+A CV +F
Sbjct: 419 LLNAQIAIGNGLINMYAKCGAINDA-CV------------------------------VF 447
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
M ++ V+WN++I G QN + EA+ F+ ++R + P+++T + L++CA+L +
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
+G Q H +K GL + D+ V N+L+ +Y +CG V++ + F M++ D VSWN+
Sbjct: 508 VGEQLHCEGLKLGL------DLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNS 561
Query: 463 MIVGCAQNGYGT-EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
+I A + EA+ F M+ G P+ VT I +L A S L E G++ + + K
Sbjct: 562 LIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKR 621
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
+ A ++ G+ G + + + M + D V W S+++ +H ++
Sbjct: 622 NVAADTAIE-NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG-YIHNELL 675
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 215/437 (49%), Gaps = 47/437 (10%)
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
K ++H L K+ + +D+++ + LI++Y + G + R+VFD M RN+VSW+ LI+ Y
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF--KEGLQIHARLMRCEKLR 285
+N ++A E+F +M++ G P+ SV+ AC + K G+QIH LM +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHG-LMSKTQYV 208
Query: 286 NDLVLGNALVDMYAKC-GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
ND+ N L+ MY G ++ AR FD + RN+VS SM+S Y + SA +F+
Sbjct: 209 NDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFST 268
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD--LQ 402
M +E +G + + P YTFG+L++A +LA+ L
Sbjct: 269 M--------------------QKEVMG-------DGLKPNEYTFGSLISATCSLANSGLV 301
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
L Q T V K G FL D++VG++L+ + K GS+ IF+ M R+ VS N
Sbjct: 302 LLEQLLTRVEKSG--FL----HDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNG 355
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
+I+G + G EA+ LF +M E + MI +L A ++E G++ S +
Sbjct: 356 LIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI-ILTAFPEFHVLENGKRKGSEVHAFL 414
Query: 523 GLAPLKDHYTC----MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM- 577
+ L + ++++ + G +++A + M D+V W S++ ++ +
Sbjct: 415 IRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD-NKDSVTWNSMITGLDQNKQFLE 473
Query: 578 -LGEYVAKKLLEIEPSN 593
+ + + E+ PSN
Sbjct: 474 AVKTFQEMRRTELYPSN 490
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD FA +L +C ++ VH +++ S+I I + L+D+YAKCG + A +
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRF 751
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVS-------- 124
F+ M +N+++WNS+I+G + G + LFA M P D ++ ++S
Sbjct: 752 FEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLV 811
Query: 125 --GFAQHDRFSEALGYFVKMHSENFA 148
GF+ D SE G +M E+F+
Sbjct: 812 NEGFSHFDSMSEIYGLAPRM--EHFS 835
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/655 (36%), Positives = 344/655 (52%), Gaps = 81/655 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC K+V+ ++V A+II F ++ ++ + + AR +FD
Sbjct: 28 FISLLRSC---KTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF- 83
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P+ WN++ G+ + + E + F K
Sbjct: 84 ------------------------------PDPKVELWNAISRGYFHNAFYREVVFLFGK 113
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S + + ++F L +CA F G ++H + K + ++ + LID+Y
Sbjct: 114 MKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRA 173
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F GM ERNIV+W S+I+ Y I + V LA
Sbjct: 174 IGSAYKLFVGMLERNIVAWTSMISGY--------------------ILCNRVALAR---- 209
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
RL R D+VL N +V Y + G + AR +FD MP R+ +S
Sbjct: 210 ---------------RLFDLAPER-DVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMS 253
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES 380
+M++GYA V++ +F +M ERNV SWN LI GY NG E L F R+L
Sbjct: 254 WNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGL 313
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P T +L+ACA L L LG+ H + G + I+VGN+LIDMY KCG
Sbjct: 314 VVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFK------GSIYVGNALIDMYSKCG 367
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+E+ +FE+M +D ++WN+MI G A +G G +AL LF +M + GEKPD +T IGVLC
Sbjct: 368 LIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLC 427
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
+C+H GLVEEG YF+SM E+ +AP +HY CMVDL GRAG LD A ++ MPM+ DA
Sbjct: 428 SCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADA 487
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW +LL AC++++NI L E +KL+ +EP N YVLLSN+Y +LGRW +V R++ LM
Sbjct: 488 VIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILM 547
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R G K PGCS IE+ V F D+RH +KEIY VLK L + ++ GY PN
Sbjct: 548 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYGPN 602
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 192/472 (40%), Gaps = 82/472 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ 57
A R V + G + +D P F +L SC + + + +H +IK F+
Sbjct: 102 AFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA 161
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
LIDVY+ + A K+F M +N+ W S+I+G + + A RLF PERD
Sbjct: 162 TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVV 221
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
WN MVSG+ + A F M
Sbjct: 222 LWNIMVSGYIEIGDMKAARKLFDTMPYR-------------------------------- 249
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
D + +++ Y G V ++F+ M ERN+ SWN LI Y NG + L
Sbjct: 250 -------DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVL 302
Query: 238 EVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
F RM+ G + P++ TL +V+SACA L A G +H + + +GNAL+D
Sbjct: 303 RCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATI-GFKGSIYVGNALID 361
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY+KCG + A VF+ M ++++++ SM+ G A
Sbjct: 362 MYSKCGLIENAMEVFESMDLKDLITWNSMICGLA-------------------------- 395
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
+G +AL LF +K P TF +L +C +L ++ G +V
Sbjct: 396 -----THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNE-- 448
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D++ + G ++ + M +E D V W A++ C
Sbjct: 449 ---YSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGAC 497
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/673 (34%), Positives = 374/673 (55%), Gaps = 77/673 (11%)
Query: 6 SVKQIVGDLAFLDSSP-FAKLLDSCLRSKSVSDTR-----RVHARIIKSQFASEIFIQNR 59
S ++ GD+ P FA L +C S S +++ ++H +K SE+ + N
Sbjct: 230 SAVELFGDMRASGCEPNFATL--ACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
L+ +YAKC CL DD +LF MP D +W
Sbjct: 288 LVSMYAKCKCL-------------------------------DDGWKLFGLMPRDDLVTW 316
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N M+SG Q+ +AL F M + S L A F G ++H + +
Sbjct: 317 NGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVR 376
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ DV++ SAL+D+Y KC V A+ V+D + ++V +++I+ Y NG + +A+++
Sbjct: 377 NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKM 436
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F ++ GI P+ V +ASV+ ACAS+AA K G ++H+ ++ + +AL+DMYA
Sbjct: 437 FRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALK-NAYEGRCYVESALMDMYA 495
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG+L+ +S Y +F+K+ ++ V+WN++I+
Sbjct: 496 KCGRLD--------------------LSHY-----------IFSKISAKDEVTWNSMISS 524
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ QNGE EEAL LFR + E V ++ T ++L+ACA+L + G++ H V+K +R
Sbjct: 525 FAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIR-- 582
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+D+F ++LIDMY KCG++E R+FE+M E++ VSWN++I G E++ L
Sbjct: 583 ----ADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSL 638
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
+ M G K DHVT + ++ AC+HAG V+EG + F M++E+ +AP +H+ CMVDL
Sbjct: 639 LRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYS 698
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
RAG LD+A LI MP +PDA IWG+LL AC+VHRN+ L E +++L +++P NSG YVL
Sbjct: 699 RAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVL 758
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLV 659
+SN+ A GRW V +VR+LM+ V K PG SW+++ ++F+ DK HP +++IY+
Sbjct: 759 MSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMS 818
Query: 660 LKMLTREMKRVGY 672
LK + E++ G+
Sbjct: 819 LKSILLELREEGH 831
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 263/552 (47%), Gaps = 71/552 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F ++ SC +++ R VH ++F+ + LI +YA G L+ AR+V
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV- 203
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F M ERD WN M+ G+ + S A+
Sbjct: 204 ------------------------------FDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + + + LS A D G Q+H L K S+V + + L+ MY
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + ++F M ++V+WN +I+ QNG AL +F M SGI PD VTL S
Sbjct: 294 KCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVS 353
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A L F +G ++H ++R + D+ L +ALVD+Y KC + A+ V+D
Sbjct: 354 LLPALTDLNGFNQGKELHGYIVR-NCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAI 412
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV ++M+SG Y NG ++EA+ +FR L
Sbjct: 413 DVVIGSTMISG-------------------------------YVLNGMSQEAVKMFRYLL 441
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P ++L ACA++A ++LG++ H++ +K+ E +V ++L+DMY
Sbjct: 442 EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY------EGRCYVESALMDMYA 495
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ IF + +D V+WN+MI AQNG EAL LF++M + G K +VT+
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISS 555
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+ + G++ + K A L + ++D+ G+ G L+ A + E+MP +
Sbjct: 556 VLSACASLPAIYYGKEIHGVVIKGPIRADLFAE-SALIDMYGKCGNLEWAHRVFESMP-E 613
Query: 558 PDAVIWGSLLAA 569
+ V W S++A+
Sbjct: 614 KNEVSWNSIIAS 625
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 256/558 (45%), Gaps = 91/558 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+L C+ +S +VH R + + A++ +Q RL+ +Y AR+
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVL------ARR-------- 90
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCS--WNSMVSGFAQHDRFSEALGYFV 140
DA +F+S+P C+ WN ++ G + AL +++
Sbjct: 91 -----------------FRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYL 133
Query: 141 KM--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
KM H ++F + +CA +G VH D+++GSALI MY
Sbjct: 134 KMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYAN 193
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + AR+VFDGM ER+ V WN ++ Y + G S A+E+F M ASG EP+ TLA
Sbjct: 194 GGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACF 253
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S A+ + G+Q+H ++ L +++ + N LV MYAKC L++ +F MP +
Sbjct: 254 LSVSATESDLFFGVQLHTLAVK-YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDD 312
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V+ M+S G QNG ++AL LF +++
Sbjct: 313 LVTWNGMIS-------------------------------GCVQNGFVDQALLLFCDMQK 341
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T +LL A +L G++ H ++V++ + D+F+ ++L+D+Y K
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM------DVFLVSALVDIYFK 395
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
C +V ++++ D V + MI G NG EA+ +F+ +L G +P+ V + V
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLI 551
L AC+ ++ G++ S LK+ Y + ++D+ + G LD + +
Sbjct: 456 LPACASMAAMKLGQELHSY--------ALKNAYEGRCYVESALMDMYAKCGRLDLSHYIF 507
Query: 552 EAMPMQPDAVIWGSLLAA 569
+ + D V W S++++
Sbjct: 508 SKISAK-DEVTWNSMISS 524
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 139/328 (42%), Gaps = 49/328 (14%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD LA V+ C S + GLQ+H R + D L LV MY + +A
Sbjct: 38 PDRRLLA-VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF +P G A + + WN LI G T G+ A
Sbjct: 97 VFSSLP-----------RGAAACA-----------------LPWNWLIRGLTMAGDYRSA 128
Query: 370 LGLFRL---LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L LF L + P +TF ++ +CA L + LGR H GL + D+
Sbjct: 129 L-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGL------DGDM 181
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FVG++LI MY G + D ++F+ M ERD V WN M+ G + G + A+ LF M
Sbjct: 182 FVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRAS 241
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFS----SMSKEHGLAPLKDHYTCMVDLLGRAG 542
G +P+ T+ AC + E +F +++ ++GL +V + +
Sbjct: 242 GCEPNFATL-----ACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCK 296
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
CLD+ L MP + D V W +++ C
Sbjct: 297 CLDDGWKLFGLMP-RDDLVTWNGMISGC 323
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/655 (34%), Positives = 351/655 (53%), Gaps = 70/655 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F +L S V + +RVH ++K F S + N LI Y KC
Sbjct: 157 DSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKC---------- 206
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
G ++ A LF + +RD SWNSM+SG + L
Sbjct: 207 ---------------------GEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F++M + + + + L ACA + +G +HA K+ +S V + L+DMY
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYS 305
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG ++ A VF M E IVSW S+I + + G +A+ +F M + G+ PD + S
Sbjct: 306 KCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTS 365
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VV ACA + +G ++H + + + ++L + NAL++MYAKCG
Sbjct: 366 VVHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCG--------------- 409
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
S++ A L+F+++ +N+VSWN +I GY+QN EAL LF ++
Sbjct: 410 ----------------SMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQ 453
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
++ + P T +L ACA LA L+ GR+ H H+++ G SD+ V +L+DMY+
Sbjct: 454 KQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF------SDLHVACALVDMYV 506
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + ++F+ + ++D + W MI G +G+G EA+ F+KM + G +P+ +
Sbjct: 507 KCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTS 566
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+H+GL++EG K F SM E + P +HY CMVDLL R+G L A IE MP++
Sbjct: 567 ILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIK 626
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA IWG+LL+ C++H ++ L E VA+ + E+EP N+ YVLL+N+YAE +W EV +++
Sbjct: 627 PDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQ 686
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+ + K G+ GCSWIE+ G N+F D HP K I +L+ LT +M R GY
Sbjct: 687 RRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGY 741
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 210/450 (46%), Gaps = 42/450 (9%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+ + F + A+ + L+ Y S L CA + G +VH+++S
Sbjct: 28 NAKICKFCEMGDLRNAMKLLSRSQRSELELNTYC--SVLQLCAELKSLEDGKRVHSIISS 85
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
+ + D +G+ L+ MY CG + RR+FDG+ I WN L++ Y + G +++ +
Sbjct: 86 NGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL 145
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F +M GI D T V+ A+ A +E ++H +++ + V+ N+L+ Y
Sbjct: 146 FEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV-NSLIAAYF 204
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG++ AR +FD + R+VVS SM+S G
Sbjct: 205 KCGEVESARILFDELSDRDVVSWNSMIS-------------------------------G 233
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
T NG + L F + V T N+L ACAN+ +L LGR H + VK G
Sbjct: 234 CTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGF--- 290
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ N+L+DMY KCG++ +F M E VSW ++I + G EA+GL
Sbjct: 291 ---SGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGL 347
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F +M G +PD + V+ AC+ + +++GR+ + + K + + L ++++
Sbjct: 348 FDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVS-NALMNMYA 406
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ G ++EA + +P++ + V W +++
Sbjct: 407 KCGSMEEANLIFSQLPVK-NIVSWNTMIGG 435
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 162/352 (46%), Gaps = 42/352 (11%)
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V N+ I + + G +A+++ R S +E + T SV+ CA L + ++G ++H+
Sbjct: 25 VDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHS- 81
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ + D VLG LV MY CG L + R +FD
Sbjct: 82 IISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFD------------------------- 116
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
+L + WN L++ Y + G E++GLF ++ + YTF +L A
Sbjct: 117 ------GILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAA 170
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
A ++ ++ H +V+K G + V NSLI Y KCG VE +F+ + +RD
Sbjct: 171 SAKVRECKRVHGYVLKLGFGSYNA------VVNSLIAAYFKCGEVESARILFDELSDRDV 224
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSWN+MI GC NG+ L F +ML G D T++ VL AC++ G + GR +
Sbjct: 225 VSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAY 284
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
K G + ++D+ + G L+ A + M + V W S++AA
Sbjct: 285 GVKA-GFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMG-ETTIVSWTSIIAA 334
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/602 (38%), Positives = 347/602 (57%), Gaps = 49/602 (8%)
Query: 87 TWNSIITGLL--KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
T+NSI+ G+ + + A+ + + + + SWNS+++ A+ EAL F +
Sbjct: 1949 TYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRK 2008
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ SF + +C+ D G H + +D+++ SALIDMY KCG++
Sbjct: 2009 LGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKD 2068
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--------ASGIEPDEVTLA 256
AR +FD + RN+VSW S+IT Y QN A +AL +F + + + D V +
Sbjct: 2069 ARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 2128
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC+ ++ +H +++ + + +GN L+D YAKCG+ ++ VFD M
Sbjct: 2129 SVLSACSRVSGKGITEGVHGFVVK-KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME- 2186
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-L 375
E++ +SWN++IA Y Q+G + EAL +F +
Sbjct: 2187 ------------------------------EKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ V T +L ACA+ L+ G+ H V+K L E ++ VG S+IDM
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL------EYNVCVGTSIIDM 2270
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG VE + F+ M E++ SW AM+ G +G EAL +F KM+ G KP+++T
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ VL ACSHAGLVEEG +F++M ++ + P +HY CMVDL GRAGCL+EA LI+ M
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
M+PD V+WGSLL AC++H+N+ LGE A+KL E++P N G YVLLSN+YA+ GRW +V R
Sbjct: 2391 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 2450
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R LM+ R +VK PG S +E+ G V+VF+V DK HP ++ IY L+ LT E++++GYVPN
Sbjct: 2451 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 2510
Query: 676 AS 677
+
Sbjct: 2511 MT 2512
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 222/382 (58%), Gaps = 7/382 (1%)
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+FK Q+HA + +S S+D + LI +Y GR++ A +F ++ +WN +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
NG + AL ++ M+ GI D+ T V+ AC + + G +H L++
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKY-GFS 157
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D+ + N L+D Y KCG A VF++M +RNVVS T+++SG ++ AR +F ++
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+NVVSW A+I GY +N + EEAL LF+ ++ E++ P YT +L+ AC + L LGR
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H + +K+ + E +++G +LIDMY KCGS++D +FETM + +WN+MI
Sbjct: 278 GIHDYAIKNCI------EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+G G EAL LF +M KPD +T IGVLCAC H V+EG YF+ M++ +G+A
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 526 PLKDHYTCMVDLLGRAGCLDEA 547
P+ +HY CM +L R+ LDEA
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 172/325 (52%), Gaps = 3/325 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S+ + VH +IK F+ ++F+QN LID Y KCG A KVF
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM +NV +W ++I+GL+ G + +A R+F +P ++ SW +M++G+ ++ + EAL
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +EN +EY+ S + AC +G +H K+ VY+G+ALIDMY
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A VF+ M +++ +WNS+IT +G +AL +F M ++PD +T
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC + KEG R+ + + + ++YA+ L+EA F
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA---FKSTKEV 420
Query: 318 NVVSETSMVSGYAKASSVKSARLMF 342
++ + + A+A V +L+F
Sbjct: 421 GSLANSPSICFDARAKQVAWTQLLF 445
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 212/458 (46%), Gaps = 78/458 (17%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S F + SC + R H + F +++F+ + LID+Y+KCG L
Sbjct: 2016 SSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQL--------- 2066
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
DA LF +P R+ SW SM++G+ Q+++ AL F
Sbjct: 2067 ----------------------KDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 2104
Query: 140 VKMHSE--------NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
E N L S LSAC+ + VH + K + + +G+
Sbjct: 2105 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 2164
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEP 250
L+D Y KCG+ +++VFD M E++ +SWNS+I Y Q+G + +ALEVF M+ G+
Sbjct: 2165 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 2224
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ VTL++V+ ACA A + G IH ++++ + L ++ +G
Sbjct: 2225 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVG------------------- 2264
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
TS++ Y K V+ A+ F +M E+NV SW A++AGY +G +EAL
Sbjct: 2265 ------------TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEAL 2312
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F + R V P + TF ++L AC++ ++ G + +KH G E
Sbjct: 2313 DIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF-NAMKHKYDIEPGIEH----YG 2367
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D++ + G + + + + M ++ D+V W +++ C
Sbjct: 2368 CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 2405
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 99/422 (23%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL +C K+ R++HA+II+S +++ + +LI +Y+ G + A +F ++ N
Sbjct: 33 LLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
FTWN II + ++G ++ +AL + M
Sbjct: 90 TFTWNLIIRA--------------------------NTINGLSE-----QALMLYKNMVC 118
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--- 201
+ A +++F + AC + +G VH L K +S DV++ + LID Y KCG
Sbjct: 119 QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 202 -----------------------VSC-----ARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+SC ARR+FD + +N+VSW ++I Y +N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGN 292
+ALE+F RM A I P+E T+ S++ AC + G IH ++ C ++ + LG
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI--GVYLGT 296
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
AL+DMY+KCG + +A VF+ MP +++ +
Sbjct: 297 ALIDMYSKCGSIKDAIEVFETMP-------------------------------RKSLPT 325
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN++I +G +EAL LF ++R +V P TF +L AC ++ +++ G T +
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385
Query: 413 KH 414
+H
Sbjct: 386 QH 387
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 32/307 (10%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
G+ LDS +L +C R T VH ++K F I + N L+D YAKCG
Sbjct: 2117 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 2176
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
++KVFD W M E+D SWNSM++ +AQ
Sbjct: 2177 VSKKVFD-------------------W------------MEEKDDISWNSMIAVYAQSGL 2205
Query: 132 FSEALGYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
EAL F M + + + L ACA + + G +H + K +V +G+
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++IDMY KCGRV A++ FD M+E+N+ SW +++ Y +G A +AL++F +M+ +G++P
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T SV++AC+ +EG + + + +VD++ + G LNEA +
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 2385
Query: 311 FDRMPIR 317
RM ++
Sbjct: 2386 IKRMKMK 2392
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 158/365 (43%), Gaps = 84/365 (23%)
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
FK QIHA+++R L ND +L L+ +Y+ G+
Sbjct: 40 FKHLRQIHAKIIR-SGLSNDQLLTRKLIHLYSTHGR------------------------ 74
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+ A L+F ++ +WN +I T NG +E+AL L++ + + + +T
Sbjct: 75 -------IAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG------- 440
F ++ AC N + LG+ H ++K+G SG D+FV N+LID Y KCG
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGF---SG---DVFVQNNLIDFYFKCGHTRFALK 181
Query: 441 ------------------------SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+++ RIF+ + ++ VSW AMI G +N EA
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK---EHGLAPLKDHY-- 531
L LFK+M P+ TM+ ++ AC+ G++ GR K E G+ Y
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGV------YLG 295
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
T ++D+ + G + +A + E MP + W S++ + VH LG+ E+E
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHG---LGQEALNLFSEMER 351
Query: 592 SNSGP 596
N P
Sbjct: 352 VNVKP 356
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ + F + L+ +C ++ R +H IK+ +++ LID+Y+KC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMV 123
G + A +VF+ M K++ TWNS+IT L G +A LF+ M + D ++ ++
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALS----EYSFGSALSACAGSVD--FKMGTQVHAL 176
E YF +M ++++ ++ Y + L A + ++D FK +V +L
Sbjct: 366 CACVHIKNVKEGCAYFTRM-TQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSL 423
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/701 (35%), Positives = 383/701 (54%), Gaps = 64/701 (9%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC--LYGA 73
L++ P LL C + +++H+ IIKS + +F Q++LI+ A L A
Sbjct: 22 LLENHPHLNLLAKC---PDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYA 78
Query: 74 RKVFDKMSNK--NVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFA 127
+F + ++ N+F WN++I + LF+ M + ++ S+ A
Sbjct: 79 LSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCA 138
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV----HALLSKSRYS 183
+ EA ++H+ L+ + L + M +QV HA L + +
Sbjct: 139 KSKATHEA----KQLHAHALKLALH-----LHPHVHTSLIHMYSQVGELRHARLVFDKST 189
Query: 184 -SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
D +ALI Y G V ARR+FD + +++VSWN++I Y Q+G +AL F R
Sbjct: 190 LRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTR 249
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M + + P++ T+ SV+SAC L + + G I +R +L L NALVDMY+KCG
Sbjct: 250 MQEADVSPNQSTMVSVLSACGHLRSLELGKWI-GSWVRDRGFGKNLQLVNALVDMYSKCG 308
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+ + +AR +F M +++V+ WN +I GY
Sbjct: 309 E-------------------------------IGTARKLFDGMEDKDVILWNTMIGGYCH 337
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
EEAL LF ++ RE+V P TF +L ACA+L L LG+ H ++ K+ L+ +G
Sbjct: 338 LSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKN-LKG-TGN 395
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+++ + S+I MY KCG VE ++F +M R SWNAMI G A NG+ ALGLF++
Sbjct: 396 VNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE 455
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M+ G +PD +T +GVL AC+ AG VE G +YFSSM+K++G++P HY CM+DLL R+G
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSG 515
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
DEAK L+ M M+PD IWGSLL AC++H + GEYVA++L E+EP NSG YVLLSN
Sbjct: 516 KFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSN 575
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
+YA GRW +V ++R + +G+ K PGC+ IEI G V+ F+V DK HP ++ I+ +L
Sbjct: 576 IYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDE 635
Query: 663 LTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
+ R ++ G+VP+ S+ DE ++E + + I F
Sbjct: 636 VDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAF 676
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 355/657 (54%), Gaps = 68/657 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL +C +++ R +H + ++++ L+ +YAKCG LY A+ +F+ +S
Sbjct: 110 FPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSIS 169
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ +RD +WN+M++ F+ H ++ + +
Sbjct: 170 HQ-----------------------------DRDIVAWNAMIAAFSFHALHAQTIHSVAQ 200
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + S L + G +HA ++ + +V + +AL+DMY KC
Sbjct: 201 MQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL 260
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVS 260
+ AR++F+ + ++N V W+++I Y + SDAL ++ M+ G+ P TLA+++
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLR 320
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA L K G ++H +++ + D +GN+L+ MYAKCG ++ A D
Sbjct: 321 ACAQLTDLKRGKKLHCHMIK-SGMDLDTTVGNSLISMYAKCGIMDNAVGFLD-------- 371
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+M+ ++ VS++A+I+G QNG E+AL +FR ++
Sbjct: 372 -----------------------EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P T LL AC++LA LQ G HG + G +D + N++IDMY KCG
Sbjct: 409 IAPYLETMIALLPACSHLAALQHG------TCCHGYTVVRGFTNDTSICNAIIDMYSKCG 462
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ IF+ M RD +SWN MI+G +G EAL LF+++ G KPD VT+I VL
Sbjct: 463 KITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLS 522
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH+GLV EG+ +FSSMS+ + P HY CMVDLL RAG LDEA T I+ MP P+
Sbjct: 523 ACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNV 582
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
IWG+LLAAC+ H+NI +GE V+KK+ + P +G +VL+SN+Y+ +GRW + +R +
Sbjct: 583 RIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQ 642
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R G K PGCSW+EI G ++VF+ + HP + I L+ L +MK++GY ++S
Sbjct: 643 RHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSS 699
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 213/473 (45%), Gaps = 82/473 (17%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
T SV Q+ +SS +L + ++ ++ + +HA I++ F + +Q L+D
Sbjct: 194 TIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLD 253
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+YAKC L+ ARK+F+ ++ KN W+ +M
Sbjct: 254 MYAKCHLLFYARKIFNTVNKKNDVCWS-------------------------------AM 282
Query: 123 VSGFAQHDRFSEALGYFVKMHS-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
+ G+ HD S+AL + M + + + L ACA D K G ++H + KS
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
D +G++LI MY KCG + A D M ++ VS++++I+ QNG A AL +F
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFR 402
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M +SGI P T+ +++ AC+ LAA + G H + ND + NA++DMY+KC
Sbjct: 403 QMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTV-VRGFTNDTSICNAIIDMYSKC 461
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
GK+ +R +FDRM R+++ SWN +I GY
Sbjct: 462 GKITISREIFDRMQNRDII-------------------------------SWNTMIIGYG 490
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+G EAL LF+ L+ + P T +L+AC +H+ +V G + S
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSAC-----------SHSGLVTEGKYWFSS 539
Query: 422 EESDIFVGNS------LIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGC 467
+ + ++D+ + G++++ + M V W A++ C
Sbjct: 540 MSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAAC 592
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 186/401 (46%), Gaps = 48/401 (11%)
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VFD + + ++V WN +I Y +GP ++ +++ M+ G+ P T ++ A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+SL A + G IH L DL + AL+ MYAKCG L +A+ +F N +S
Sbjct: 117 CSSLQALQLGRLIHTH-AHILGLSMDLYVSTALLHMYAKCGHLYQAQTLF------NSIS 169
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+R++V+WNA+IA ++ + + + + +++ V
Sbjct: 170 HQ-----------------------DRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGV 206
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T ++L L G+ H + +++ ++ + +L+DMY KC
Sbjct: 207 TPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFF------DNVVLQTALLDMYAKCHL 260
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLC 500
+ +IF T+ +++ V W+AMI G + ++AL L+ ML + G P T+ +L
Sbjct: 261 LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLR 320
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+ ++ G+K M K G+ ++ + + G +D A ++ M + D
Sbjct: 321 ACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM-IAKDT 378
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLL---EIEPSNSGPYV 598
V + ++++ C + Y K LL +++ S PY+
Sbjct: 379 VSYSAIISGC------VQNGYAEKALLIFRQMQSSGIAPYL 413
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ T + + + ++ AR +F ++ + +VV WN +I Y +G ++++ L+ + +
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V PT++TF LL AC++L LQLGR HTH + G D++V +L+ MY KCG
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHA------HILGLSMDLYVSTALLHMYAKCG 156
Query: 441 SVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ +F ++ +RD V+WNAMI + + + + +M G P+ T++ +
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L A + +G+ + + + T ++D+ + L A+ + + +
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQ-TALLDMYAKCHLLFYARKIFNTVNKKN 275
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D V W +++ +H +I + +L I N P L+ M + ++ R +K
Sbjct: 276 D-VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP-ATLATMLRACAQLTDLKRGKK 333
Query: 619 L 619
L
Sbjct: 334 L 334
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/670 (34%), Positives = 369/670 (55%), Gaps = 42/670 (6%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
TQ S K I+ +L L+D C+ S+ + VHA+II A+++ +L+
Sbjct: 21 TQIS-KTILQELKSPTHQTLHYLIDQCI---SLKQLKHVHAQIILHGLATQVLTLGKLVS 76
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+ L A K+FD++ P+ ++ +N +
Sbjct: 77 SSVQLRDLRYAHKLFDQI-------------------------------PQPNKFMFNHL 105
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+ G++ ++L + +M + ++++ L ACA + +G VHA K
Sbjct: 106 IKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGM 165
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
S + +A++++Y CG ++ ARRVFD + ER +VSWNS+I Y + G + +A+ +F
Sbjct: 166 GSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFRE 225
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M G+EPD TL ++S F G +H M + D ++ NAL+DMYAKCG
Sbjct: 226 MQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLH-MVVTGIEIDSIVTNALMDMYAKCG 284
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L A+ VFD+M ++VVS T M++ YA + A F +M +NVVSWN++I + Q
Sbjct: 285 NLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQ 344
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EA+ LF + V T +L++C+++ DL LG+QAH+++ + + +
Sbjct: 345 EGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSAT- 403
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ N++IDMY KCG+++ +F M E++ VSWN +I A +GYG EA+ +F+K
Sbjct: 404 -----LCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEK 458
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M G PD +T G+L ACSH+GLV+ G+ YF M+ G++P +HY CMVDLLGR G
Sbjct: 459 MQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRG 518
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L EA +LI+ MP++PD V+W +LL AC+ + N+ +G+ + K+LLE+ NSG YVLLSN
Sbjct: 519 LLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSN 578
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MY+E RW ++ + K++ + G+ K S+IEI G FMV DKRH + IY +L
Sbjct: 579 MYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQ 638
Query: 663 LTREMKRVGY 672
L +K GY
Sbjct: 639 LMDHLKSAGY 648
>gi|302787184|ref|XP_002975362.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
gi|300156936|gb|EFJ23563.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
Length = 661
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 343/592 (57%), Gaps = 11/592 (1%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A + C R+ +++ RVHA +++S + F+ N L+++Y +CG + G+R FD + +
Sbjct: 55 ANRIRQCGRAGDLAEAERVHAAVLRSGLGGDRFLSNLLVEMYGRCGGVEGSRTAFDAIES 114
Query: 83 KNV----FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
NV F +I+ K G I DA +F M RD +WN+M+S +A + EA
Sbjct: 115 PNVYSDIFLGTAIVNMYGKCGSIHDAEEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKL 174
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M E F S L AC+ D + G VH +++ + ++ +G AL+++YGK
Sbjct: 175 FQEMEHEGVKADRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALVNLYGK 234
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + AR +F + +N+VSWN LIT Y QNG DAL++F M G PD+VT ++
Sbjct: 235 CGALEEARSLFGKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMALDGTRPDDVTFNNL 294
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
V+ C + + ++ +H RL+ E + D V+ NA++++Y K G L +AR F RM +R+
Sbjct: 295 VNLCTGVVSLEQARILHRRLIESE-IHVDAVMRNAVMNLYVKAGSLEDARAEFYRMEVRD 353
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V+ T +++ Y + ++ ++R +FT M +NV+SW + I + NG+ +A+GL +
Sbjct: 354 VIGNT-LITSYGQCGNIDASRAVFTGMECKNVISWTSSIVAHATNGQASQAMGLLHQMHL 412
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E V P T L++AC +LA + + ++ L S ES I + +L++M+ K
Sbjct: 413 EGVHPNKVTLLGLIDACVSLAAAVDKNERSIVIPEYVLSVASRFESTIVLETALLNMHAK 472
Query: 439 CGSVEDGCRI-FETMV--ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
CG+VE+ RI FE M ERD ++WNAM+ A NG+G EA+ LF M+L G P VT+
Sbjct: 473 CGNVEEAERIFFEKMADGERDSIAWNAMVSAYATNGHGLEAIELFYGMVLQGVLPTSVTL 532
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L CSHAGLV +G +YF+ M ++HG+ P DH C+VDLLGRAG L EA+ LI MP
Sbjct: 533 TSILSGCSHAGLVGQGIRYFACMVEDHGVTPTADHMNCLVDLLGRAGWLREAEDLIRKMP 592
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE-IEPSNSGPYVLLSNMYAE 606
D + W LL AC++H ++ G A+K ++ +S PYVLLSNMY E
Sbjct: 593 -AGDPLTWKVLLGACRLHGDLERGTNAARKASNFLDHCDSSPYVLLSNMYLE 643
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 219/471 (46%), Gaps = 63/471 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL++C + + + VH R+ + F +E + + L+++Y KCG L AR +F
Sbjct: 186 DRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALVNLYGKCGALEEARSLF 245
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
K+ +KNV +WN +IT L+ G ++DA +LF M D ++N++V+
Sbjct: 246 GKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMALDGTRPDDVTFNNLVNLCTGVVSLE 305
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A ++ SE + + ++ K G+ A R +G+ LI
Sbjct: 306 QA-----RILHRRLIESEIHVDAVMRNAVMNLYVKAGSLEDARAEFYRMEVRDVIGNTLI 360
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
YG+CG + +R VF GM +N++SW S I + NG AS A+ + +M G+ P++V
Sbjct: 361 TSYGQCGNIDASRAVFTGMECKNVISWTSSIVAHATNGQASQAMGLLHQMHLEGVHPNKV 420
Query: 254 TLASVVSACASLAAF----KEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEAR 308
TL ++ AC SLAA + + I ++ + + +VL AL++M+AKCG + EA
Sbjct: 421 TLLGLIDACVSLAAAVDKNERSIVIPEYVLSVASRFESTIVLETALLNMHAKCGNVEEAE 480
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML--ERNVVSWNALIAGYTQNGEN 366
R+ F KM ER+ ++WNA+++ Y NG
Sbjct: 481 ------------------------------RIFFEKMADGERDSIAWNAMVSAYATNGHG 510
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EA+ LF + + V PT T ++L+ C +H +V G+R+ + D
Sbjct: 511 LEAIELFYGMVLQGVLPTSVTLTSILSGC-----------SHAGLVGQGIRYFACMVEDH 559
Query: 427 FVG------NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
V N L+D+ + G + + + M D ++W ++ C +G
Sbjct: 560 GVTPTADHMNCLVDLLGRAGWLREAEDLIRKMPAGDPLTWKVLLGACRLHG 610
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/689 (35%), Positives = 368/689 (53%), Gaps = 84/689 (12%)
Query: 13 DLAFLDS----SPFAKLLDSCLR----SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+L+F S +PF L S S++ ++H+++I + S F+ N L+++Y
Sbjct: 13 NLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLY 72
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSM 122
AKCG +D LF+S P+ ++ SW S+
Sbjct: 73 AKCGS-------------------------------VDQTLLLFSSAPDDSKNVVSWTSL 101
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++ + R +AL +F M + Y+F + LSAC + G Q+H+L+ K +
Sbjct: 102 ITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGF 161
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++V++ SAL+DMY KC + A +VF+ M RN+VSWN++I + QN A+ F
Sbjct: 162 LAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKT 221
Query: 243 MMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
++ + DEV+ +SV SACA+ + G Q+H ++ + N + + N+L DMY KC
Sbjct: 222 LLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKL-GVWNLVYINNSLSDMYGKC 280
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G N+ AK +F+ R+VV+WN +I Y
Sbjct: 281 GLFNDV----------------------AK---------LFSNTGARDVVTWNIMIMAYV 309
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
N E+A F +++R+ P ++ ++L++CANLA L G H +++ SG
Sbjct: 310 YNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR------SG 363
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
++ V +SLI MY KCGS+ D +IFE +R+ V W A+I C Q+G+ + LF+
Sbjct: 364 FVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFE 423
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+ML G KPD++T + VL ACSH G VEEG YF+SM K HG+ P +HY C+VDLL RA
Sbjct: 424 QMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRA 483
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G LD AK IE MP++PDA +WG+LL+AC+ H N+++G+ VA KL ++EP N G YVLL
Sbjct: 484 GELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLC 543
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+ G E VR+ M GV K+PGCSWI+I VF V DK H KEIY +L+
Sbjct: 544 NILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLE 603
Query: 662 MLTREMKRVGYVPNA----SDDEAYEEQN 686
L +K+ GYV + E Y+EQ+
Sbjct: 604 KLKELVKKKGYVAETEFAINTAEEYKEQS 632
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 31/308 (10%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
++ +L LD F+ + +C + ++ ++VH +K + ++I N L D+Y KCG
Sbjct: 223 LLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGL 282
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
K+F ++V T WN M+ + +
Sbjct: 283 FNDVAKLFSNTGARDVVT-------------------------------WNIMIMAYVYN 311
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
+ +A F M + E S+ S L +CA GT +H + +S + ++ +
Sbjct: 312 HNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVA 371
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
S+LI MY KCG + A ++F+ +RN+V W ++I +Q+G A+ +E+F +M+ GI+
Sbjct: 372 SSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIK 431
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD +T SV+SAC+ +EG +++ + +VD+ ++ G+L+ A+
Sbjct: 432 PDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKR 491
Query: 310 VFDRMPIR 317
+ MPI+
Sbjct: 492 FIELMPIK 499
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/664 (35%), Positives = 362/664 (54%), Gaps = 78/664 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKV 76
D + F + C SK + + +HA I+++Q +I + LI +YA+C L ARK
Sbjct: 57 DGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKT 116
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M K + T WN++++G++++ AL
Sbjct: 117 FDEMGKKTLVT-------------------------------WNALIAGYSRNGDHRGAL 145
Query: 137 GYFVKMHS---ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ M S E +F SAL AC+ D G ++ A S Y+SD + +ALI
Sbjct: 146 KIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALI 205
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
+MY KCG + AR+VFD ++ R++++WN++I+ Y + G A+ ALE+F RM + +P+ V
Sbjct: 206 NMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVV 265
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +++AC +L ++G IH R ++ +DLV+GN L++MY KC
Sbjct: 266 TFIGLLTACTNLEDLEQGRAIH-RKVKEHGYESDLVIGNVLLNMYTKC------------ 312
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+SS++ AR +F ++ R+V++WN LI Y Q G+ ++AL +F
Sbjct: 313 ------------------SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE-ESDIFVGNSL 432
+ ++ E+V P T N+L+ACA L + G+ H + SG ++D+ + NSL
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIA-------SGRCKADVVLENSL 407
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
++MY +CGS++D +F + ++ VSW+ +I AQ+G+ L F ++L G D
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADD 467
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VTM+ L ACSH G+++EG + F SM +HGLAP H+ CMVDLL RAG L+ A+ LI
Sbjct: 468 VTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIH 527
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV-LLSNMYAELGRWG 611
MP PDAV W SLL+ CK+H + VA KL E+E + V LLSN+YAE GRW
Sbjct: 528 DMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD 587
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+ VRK +R K PGCS+IEI V+ F+ DK HP + I +K L+++MK G
Sbjct: 588 D---VRKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644
Query: 672 YVPN 675
YVP+
Sbjct: 645 YVPD 648
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 254/482 (52%), Gaps = 45/482 (9%)
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
K G + DA +F ++ + SW +V+ FA++ + EALGY+ +M E F
Sbjct: 4 KCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVV 63
Query: 157 ALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
A+ C+ S D K G +HA++ +++ D+ +G+ALI MY +C + AR+ FD M ++
Sbjct: 64 AIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKK 123
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMA---SGIEPDEVTLASVVSACASLAAFKEGL 272
+V+WN+LI Y +NG AL+++ M++ G++PD +T +S + AC+ + +G
Sbjct: 124 TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGR 183
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+I AR + +D ++ NAL++MY+KCG L AR VFDR+ R+V++ +M+SGYAK
Sbjct: 184 EIEARTV-ASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+ A +F +M G N+ P TF LL
Sbjct: 243 GAATQALELFQRM------------------GPNDPK-------------PNVVTFIGLL 271
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC-GSVEDGCRIFET 451
AC NL DL+ GR H V +HG ESD+ +GN L++MY KC S+E+ ++FE
Sbjct: 272 TACTNLEDLEQGRAIHRKVKEHGY------ESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ RD ++WN +IV Q G +AL +FK+M L P+ +T+ VL AC+ G +G
Sbjct: 326 LRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ + ++ A + + M ++ R G LD+ + A+ V W +L+AA
Sbjct: 386 KAVHALIASGRCKADVVLENSLM-NMYNRCGSLDDTVGVFAAI-RDKSLVSWSTLIAAYA 443
Query: 572 VH 573
H
Sbjct: 444 QH 445
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 191/376 (50%), Gaps = 37/376 (9%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKCG V+ A VF + N VSW ++ + +NG +AL + RM+ G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ C+S K+G +HA ++ + L D++LG AL+ MYA+C L AR FD M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+ +V+ ++++GY++ + A ++ M+ ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKS------------------------- 155
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
E + P TF + L AC+ + D+ GR+ V SG SD V N+LI+
Sbjct: 156 ---PEGMKPDAITFSSALYACSVVGDISQGREIEARTVA------SGYASDSIVQNALIN 206
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCGS+E ++F+ + RD ++WN MI G A+ G T+AL LF++M KP+ VT
Sbjct: 207 MYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVT 266
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR-AGCLDEAKTLIEA 553
IG+L AC++ +E+GR + KEHG ++++ + + L+EA+ + E
Sbjct: 267 FIGLLTACTNLEDLEQGRAIHRKV-KEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 554 MPMQPDAVIWGSLLAA 569
+ + D + W L+ A
Sbjct: 326 LRTR-DVITWNILIVA 340
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 334/618 (54%), Gaps = 40/618 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N+F S I+ L G+I A +LF MP RD +WNSM++ ++Q EAL F +M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ N ++F + LSACAG+ F GT++HAL+ Y S + + ++LIDMYGKC
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDA--------------------------- 236
A +VF M + N VSW SL+ Y +G S+A
Sbjct: 124 SAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGE 183
Query: 237 ----LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
L++F M S +EPD+ T ++++SAC F G +H ++R + + N
Sbjct: 184 IELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIR-SGWSSAMEAKN 242
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
+++ +YAK G LN+A V + VS +++ Y K V A LMF + E+N+VS
Sbjct: 243 SILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVS 302
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W ++I GY +NG EEAL F + P +TFG +L+AC++LA L GR H +
Sbjct: 303 WTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAI 362
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
++G + ++VGN L++MY KCG ++ F + +D VS+NA++ +G
Sbjct: 363 RNGF------STYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGK 416
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
+EAL L++ M+ CG KPD +T IG+L CSH+GL+EEGR +F+SM HGL+ DH
Sbjct: 417 ASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVA 476
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPD--AVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
CMVD+LGR G L EAK L++ D A +LL AC H + +G Y+ K L +E
Sbjct: 477 CMVDMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLE 536
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
P+ YVL SN+Y G+W E VRK M G+ K PGCSWIE+ V F+ + +
Sbjct: 537 PNKEISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLY 596
Query: 651 PLNKEIYLVLKMLTREMK 668
P E+Y L L EM+
Sbjct: 597 PYTDELYKTLYFLEFEMR 614
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 173/354 (48%), Gaps = 26/354 (7%)
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
S+++ ++ I G G + AR++FD M R+ V+WNS+IT Y Q G +AL +F +M
Sbjct: 3 SNLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQM 62
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ +PD T + +SACA +F G +IHA L+ + L + N+L+DMY KC
Sbjct: 63 RNTNTKPDHFTFTATLSACAGAGSFPFGTKIHA-LVIILGYHSSLPVNNSLIDMYGKCFD 121
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
A VF M N VS S++ Y + A +F M + ++WN +IAG +
Sbjct: 122 AFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRY 181
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
GE E L +FR ++ + P +T+ L++AC + G H V++ G +
Sbjct: 182 GEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAK 241
Query: 424 SDIF-------------------------VGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ I N++ID YMK G V + +F+++ E++ V
Sbjct: 242 NSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIV 301
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
SW +MI G A+NGYG EAL F M PD T VL ACS ++ GR
Sbjct: 302 SWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGR 355
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 200/433 (46%), Gaps = 64/433 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L +C + S ++HA +I + S + + N LID+Y KC + A +VF
Sbjct: 70 DHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVF 129
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M + N +W S++ G +AS +F MP + + +WN+M++G ++ L
Sbjct: 130 KEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLD 189
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS---------DVY- 187
F +M ++++ + +SAC S++F G +H L+ +S +SS +Y
Sbjct: 190 MFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYA 249
Query: 188 -MGS--------------------ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
GS A+ID Y K G V+ A +F + E+NIVSW S+IT
Sbjct: 250 KFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITG 309
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y +NG +AL FV M ++ PD+ T +V+ AC+SLA G +H +R
Sbjct: 310 YARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIR-NGFST 368
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
L +GN LV+MYAKCG L+ + L F +
Sbjct: 369 YLYVGNGLVNMYAKCGDLD-------------------------------GSILAFHDIC 397
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+++VS+NAL+ + +G+ EAL L+ + P TF LL C++ ++ GR
Sbjct: 398 AKDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRL 457
Query: 407 AHTHVVK-HGLRF 418
+ HGL +
Sbjct: 458 FFNSMKSVHGLSY 470
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 182/360 (50%), Gaps = 28/360 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ L+ +C S +H +I+S ++S + +N ++ +YAK G L A KV
Sbjct: 202 DQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVV 261
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +WN+II +K G++++A +F S+PE++ SW SM++G+A++ EAL
Sbjct: 262 ESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGEEALR 321
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+FV M S F +++FG+ L AC+ G VH ++ +S+ +Y+G+ L++MY
Sbjct: 322 FFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMYA 381
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + F + +++VS+N+L+ + +G AS+AL+++ MM G +PD++T
Sbjct: 382 KCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYEDMMTCGTKPDKMTFIG 441
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C+ +EG + L + +VDM + G L EA+
Sbjct: 442 LLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAK--------- 492
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V Y+K S V+++ S AL+ + +GE E L + LK
Sbjct: 493 ------ELVKKYSKTSDVEAS-------------SCEALLGACSAHGEVEMGTYLGKTLK 533
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/581 (36%), Positives = 335/581 (57%), Gaps = 38/581 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF +++I +K G I+ R+F M +R+ SW ++++G EAL YF +M
Sbjct: 191 SVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMW 250
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
++F AL A A S G +H K + ++ + L MY KCG+
Sbjct: 251 ISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKAD 310
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
R+F+ M+ ++VSW +LIT Y Q G A+E F RM S + P++ T A+V+SACA
Sbjct: 311 YVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACA 370
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+LA K G QIH ++R L + L + N++V +Y+K G L
Sbjct: 371 NLAIAKWGEQIHGHVLRL-GLVDALSVANSIVTLYSKSGLL------------------- 410
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
KSA L+F + ++++SW+ +IA Y+Q G +EA ++RE P
Sbjct: 411 ------------KSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKP 458
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+ ++L+ C ++A L+ G+Q H HV+ G+ + + V ++LI MY KCGSVE
Sbjct: 459 NEFALSSVLSVCGSMALLEQGKQVHAHVLCIGI------DHEAMVHSALISMYSKCGSVE 512
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ +IF M + +SW AMI G A++GY EA+ LF+K+ G KPD+VT IGVL ACS
Sbjct: 513 EASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS 572
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAG+V+ G YF M+ E+ ++P K+HY C++DLL RAG L EA+ +I +MP D V+W
Sbjct: 573 HAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVW 632
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
+LL +C+VH ++ G + A++LL ++P+++G ++ L+N+YA GRW E +RKLM+ +
Sbjct: 633 STLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSK 692
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
GV+K+ G SW+ + +N F+ D+ HP ++ I VL++L+
Sbjct: 693 GVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLS 733
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 230/498 (46%), Gaps = 49/498 (9%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S N+ NS + L+K G + + +F M RD+ SW ++++G+ EAL F
Sbjct: 86 SVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 145
Query: 141 KMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++ AL AC V+ G +H KS + V++ SALIDMY K
Sbjct: 146 NMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKV 205
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G++ RVF M +RN+VSW ++I G +AL F M S + D T A +
Sbjct: 206 GKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIAL 265
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A A + G IH + ++ + V+ N L MY KCGK + +F++M + +V
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVI-NTLATMYNKCGKADYVMRLFEKMKMPDV 324
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS T++++ Y Q GE E A+ F+ +++
Sbjct: 325 VSWTTLIT-------------------------------TYVQKGEEEHAVEAFKRMRKS 353
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+V P YTF +++ACANLA + G Q H HV++ GL + V NS++ +Y K
Sbjct: 354 NVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLV------DALSVANSIVTLYSKS 407
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ +F + +D +SW+ +I +Q GY EA M G KP+ + VL
Sbjct: 408 GLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 467
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDH----YTCMVDLLGRAGCLDEAKTLIEAMP 555
C L+E+G++ + H L DH ++ ++ + + G ++EA + M
Sbjct: 468 SVCGSMALLEQGKQVHA-----HVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 556 MQPDAVIWGSLLAACKVH 573
+ + + W +++ H
Sbjct: 523 IN-NIISWTAMINGYAEH 539
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 63/387 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA L + S + + +H + IK F F+ N L +Y KCG
Sbjct: 257 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK-------- 308
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D RLF M D SW ++++ + Q A+
Sbjct: 309 -----------------------ADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVE 345
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N + ++Y+F + +SACA K G Q+H + + + + ++++ +Y
Sbjct: 346 AFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYS 405
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A VF G+ ++I+SW+++I Y Q G A +A + M G +P+E L+S
Sbjct: 406 KSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 465
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C S+A ++G Q+HA ++ C + ++ ++ +AL+ MY+KCG + EA +F+ M I
Sbjct: 466 VLSVCGSMALLEQGKQVHAHVL-CIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKIN 524
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N++S T+M++GYA ++G ++EA+ LF +
Sbjct: 525 NIISWTAMINGYA-------------------------------EHGYSQEAINLFEKIS 553
Query: 378 RESVCPTHYTFGNLLNACANLADLQLG 404
+ P + TF +L AC++ + LG
Sbjct: 554 SVGLKPDYVTFIGVLTACSHAGMVDLG 580
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 31/294 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA ++ +C ++H +++ + + N ++ +Y+K G L A VF ++
Sbjct: 362 FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGIT 421
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K++ +W++II + ++Q EA Y
Sbjct: 422 RKDIISWSTII-------------------------------AVYSQGGYAKEAFDYLSW 450
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E +E++ S LS C + G QVHA + + + SALI MY KCG
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGS 510
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A ++F+GM+ NI+SW ++I Y ++G + +A+ +F ++ + G++PD VT V++A
Sbjct: 511 VEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTA 570
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
C+ G + ++ ++D+ + G+L+EA + MP
Sbjct: 571 CSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP 624
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 137/309 (44%), Gaps = 22/309 (7%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-R 374
+ N++ S + K + +R MF KM R+ +SW LIAGY ++ EAL LF
Sbjct: 87 VHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSN 146
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + + + L AC ++ G H VK GL + +FV ++LID
Sbjct: 147 MWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLI------NSVFVSSALID 200
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MYMK G +E GCR+F+ M +R+ VSW A+I G GY EAL F +M + D T
Sbjct: 201 MYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHT 260
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
L A + + L+ G+ + K+ G + + + G D L E M
Sbjct: 261 FAIALKASADSSLLHHGKAIHTQTIKQ-GFDESSFVINTLATMYNKCGKADYVMRLFEKM 319
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLG--EYVAKKLLEIEPSNSGP--YVLLSNMYA----E 606
M PD V W +L+ + G E+ + + SN P Y + + A
Sbjct: 320 KM-PDVVSWTTLITTY-----VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLA 373
Query: 607 LGRWGEVVR 615
+ +WGE +
Sbjct: 374 IAKWGEQIH 382
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 111/309 (35%), Gaps = 82/309 (26%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C + ++VHA ++ E + + LI +Y+KCG + A K+F+ M
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+ +W ++I +G+A+H EA+ F K
Sbjct: 523 INNIISWTAMI-------------------------------NGYAEHGYSQEAINLFEK 551
Query: 142 MHSENFALSEYSFGSALSAC--AGSVDFK------MGTQVHALLSKSRYSSDVYMGSALI 193
+ S +F L+AC AG VD M + SK Y +I
Sbjct: 552 ISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHY-------GCII 604
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D+ + GR+S A + M CY D+V
Sbjct: 605 DLLCRAGRLSEAEHMIRSM------------PCY----------------------TDDV 630
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
++++ +C G +L+R + N AL ++YA G+ EA +
Sbjct: 631 VWSTLLRSCRVHGDVDRGRWTAEQLLRLDP--NSAGTHIALANIYAAKGRWKEAAHIRKL 688
Query: 314 MPIRNVVSE 322
M + V+ E
Sbjct: 689 MKSKGVIKE 697
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/653 (35%), Positives = 345/653 (52%), Gaps = 81/653 (12%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ SC SK V ++ A+II + F +I +L+ + A + AR++FD++ + N+
Sbjct: 108 MRSCKTSKQV---HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNI 164
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
WNSM G+AQ + + E + F +M
Sbjct: 165 -------------------------------ALWNSMFRGYAQSESYREVVFLFFQMKGM 193
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ + ++F L +C G QVH L K + + ++G+ LIDMY G V A
Sbjct: 194 DIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDA 253
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
++F M ERN+V+W S+I Y + A +VSA
Sbjct: 254 YKIFCEMFERNVVAWTSMINGY-------------------------ILSADLVSA---- 284
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
RL R D+VL N +V Y + G + EAR +F MP R+V+ ++
Sbjct: 285 ----------RRLFDLAPER-DVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTV 333
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPT 384
+ GYA +V++ +F +M ERN+ SWNALI GY NG E LG F R+L V P
Sbjct: 334 LKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPN 393
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T +L+ACA L L LG+ H + GL+ +++VGN+L+DMY KCG +E+
Sbjct: 394 DATLVTVLSACARLGALDLGKWVHVYAESSGLK------GNVYVGNALMDMYAKCGIIEN 447
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F M +D +SWN +I G A + G +AL LF +M G+KPD +T IG+LCAC+H
Sbjct: 448 AISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTH 507
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLVE+G YF SM+ ++ + P +HY CMVD+L RAG L++A + MP++ D VIW
Sbjct: 508 MGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWA 567
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
LL AC++++N+ L E ++L+E+EP N YV+LSN+Y + GRW +V R++ MR G
Sbjct: 568 GLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTG 627
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K PGCS IE+ V F D+RHP +EIY VL+ L + ++ GYVP+ +
Sbjct: 628 FKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFGYVPDLT 680
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 187/454 (41%), Gaps = 90/454 (19%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L SC + ++ + +VH +IK F F+ LID+Y+ G + A K+F +M
Sbjct: 202 FPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMF 261
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NV W S+I G + + A RLF PERD WN MVSG+ + EA F +
Sbjct: 262 ERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXE 321
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + DV + ++ Y G
Sbjct: 322 MPNR---------------------------------------DVMFWNTVLKGYATNGN 342
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVS 260
V +F+ M ERNI SWN+LI Y NG + L F RM++ S + P++ TL +V+S
Sbjct: 343 VEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLS 402
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA L A G +H L+ ++ +GNAL+DMYAKCG + A VF M ++++
Sbjct: 403 ACARLGALDLGKWVHV-YAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLI 461
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S WN LI G + +AL LF +K
Sbjct: 462 S-------------------------------WNTLIGGLAMHSRGADALNLFFQMKNAG 490
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LID 434
P TF +L AC H +V+ G + D + ++D
Sbjct: 491 QKPDGITFIGILCAC-----------THMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVD 539
Query: 435 MYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
M + G +E M VE D V W ++ C
Sbjct: 540 MLARAGRLEQAXAFVRKMPVEADGVIWAGLLGAC 573
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 356/670 (53%), Gaps = 84/670 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA L +C R +H I + +++F+ L+D+Y KC CL
Sbjct: 14 PFA--LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL---------- 61
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
DA+ +FA+MP RD +WN+M++G+A H + A+ + +
Sbjct: 62 ---------------------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLL 100
Query: 141 KMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALL----------SKSRYSSDVYM 188
M + L + + + L A GT VHA SKS+ + V +
Sbjct: 101 SMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLL 160
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL+DMY KCG + ARRVFD M RN V+W++LI + + A +F M+A G+
Sbjct: 161 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 220
Query: 249 -EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++AS + ACASL + G Q+HA L + + DL GN+L+ MYA
Sbjct: 221 CFLSPTSIASALRACASLDHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYA-------- 271
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
KA + A +F +M ++ VS++AL++GY QNG E
Sbjct: 272 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA +F+ ++ +V P T +L+ AC++LA LQ GR +H V+ GL S+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL------ASETS 362
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ N+LIDMY KCG ++ ++F M RD VSWN MI G +G G EA LF +M G
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT I +L ACSH+GLV EG+ +F M +GL P +HY CMVDLL R G LDEA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I++MP++ D +W +LL AC+V++NI LG+ V++ + E+ P +G +VLLSN+Y+
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GR+ E VR + + +G K PGCSWIEI G ++ F+ D+ HP + EIY L + +
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 602
Query: 668 KRVGYVPNAS 677
K++GY P+ S
Sbjct: 603 KKLGYQPDTS 612
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 78/461 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARII----------KSQFASEIFIQNRLIDVYAKC 67
++S LL + +++ VHA I KS+ + + L+D+YAKC
Sbjct: 112 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 171
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L AR+VFD M +N TW+++I G + + A LF +M + C
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF--------- 222
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
LS S SAL ACA +MG Q+HALL+KS +D+
Sbjct: 223 ---------------------LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 261
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
G++L+ MY K G + A +FD M ++ VS+++L++ Y QNG A +A VF +M A
Sbjct: 262 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 321
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EPD T+ S++ AC+ LAA + G H ++ L ++ + NAL+DMYAKCG+++ +
Sbjct: 322 VEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLS 380
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VF+ MP R++VS +M++GY +G +
Sbjct: 381 RQVFNMMPSRDIVSWNTMIAGYGI-------------------------------HGLGK 409
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA LF + P TF LL+AC++ + L + + HV+ HG E I
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSH-SGLVIEGKHWFHVMGHGYGLTPRMEHYI- 467
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D+ + G +++ ++M R D W A++ C
Sbjct: 468 ---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 505
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L FL + A L +C + ++HA + KS +++ N L+ +YAK G + A
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 279
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FD+M+ K+ ++++++ SG+ Q+ R
Sbjct: 280 IALFDEMAVKDTVSYSALV-------------------------------SGYVQNGRAE 308
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA F KM + N + S + AC+ + G H + +S+ + +ALI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGR+ +R+VF+ M R+IVSWN++I Y +G +A +F+ M G PD V
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++SAC+ EG + L + +VD+ ++ G L+EA
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488
Query: 314 MPIR 317
MP+R
Sbjct: 489 MPLR 492
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 192/482 (39%), Gaps = 105/482 (21%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ + P+ T + AC++LA G IH + L+ DL + AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCA 59
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L +A +F MP R++V+ WNA++AGY
Sbjct: 60 CLPDAAHIFATMPARDLVA-------------------------------WNAMLAGYAH 88
Query: 363 NGENEEALG--LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK---HGLR 417
+G A+ L ++ + P T LL A L G H + ++ H R
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 418 FLSGEESD-IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+ +D + +G +L+DMY KCGS+ R+F+ M R+ V+W+A+I G T+A
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 477 LGLFKKML---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
LFK ML LC P ++ L AC+ + G + + ++K A L +
Sbjct: 209 FLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS- 265
Query: 534 MVDLLGRAGCLDEAKTLIEAMP----------------------------------MQPD 559
++ + +AG +D+A L + M ++PD
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325
Query: 560 AVIWGSLLAACK-----VHRNIMLGEYVAKKLL-EIEPSNSGPYVLLSNMYAELGRWGEV 613
A SL+ AC H G + + L E N+ L +MYA+ GR
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-----LIDMYAKCGRIDLS 380
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+V +M R +V SW N + H L KE L EM +G+
Sbjct: 381 RQVFNMMPSRDIV-----SW-------NTMIAGYGIHGLGKEA----TALFLEMNNLGFP 424
Query: 674 PN 675
P+
Sbjct: 425 PD 426
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 245/718 (34%), Positives = 381/718 (53%), Gaps = 106/718 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L P KLL C +S+ +++HA IIK+ + +F ++LI+
Sbjct: 27 LQEHPSLKLLSKC---QSIRTFKQIHAHIIKTGLHNTLFALSKLIE-------------- 69
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+ + + G I A LF S+ E + WNSM+ G + + AL
Sbjct: 70 ---------------FSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALAL 114
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+FV+M + Y+F L +CA G Q+HA + K + SDV++ ++LI+MY
Sbjct: 115 VFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMY 174
Query: 197 GKCGRVSCA-------------------------------RRVFDGMRERNIVSWNSLIT 225
+ G ++ A R++FD M +++VSWN++I
Sbjct: 175 AQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIA 234
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q G + +AL +F M + + P+E T+ SV+SACA A G + + + L
Sbjct: 235 GYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS-WIEDRGLC 293
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
++L L NAL+DMY+KCG L ++AR +F M
Sbjct: 294 SNLKLVNALIDMYSKCGDL-------------------------------QTARELFDDM 322
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
LER+V+SWN +I GYT +EAL LFR + V PT TF ++L +CA+L + LG+
Sbjct: 323 LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H ++ K + + SLID+Y KCG++ ++F+ M + SWNAMI
Sbjct: 383 WIHAYINK------NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G A +G +A LF KM G +P+ +T +G+L AC HAGLV+ G+++FSSM +++ ++
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS 496
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P HY CM+DLLGRAG +EA++L++ M ++PD IWGSLL AC+ H + LGE VA++
Sbjct: 497 PKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAER 556
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L E+EP N G YVLLSN+YA G+W +V R+R + RG+ K PGC+ IE+ V+ F+V
Sbjct: 557 LFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLV 616
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
DK HP +++IY +L+ + ++K G+V + S+ DE ++E S+ + I F
Sbjct: 617 GDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAF 674
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 356/670 (53%), Gaps = 84/670 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA L +C R +H I + +++F+ L+D+Y KC CL
Sbjct: 14 PFA--LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL---------- 61
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
DA+ +FA+MP RD +WN+M++G+A H + A+ + +
Sbjct: 62 ---------------------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLL 100
Query: 141 KMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALL----------SKSRYSSDVYM 188
M + L + + + L A GT VHA SKS+ + V +
Sbjct: 101 SMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLL 160
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL+DMY KCG + ARRVFD M RN V+W++LI + + A +F M+A G+
Sbjct: 161 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 220
Query: 249 -EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++AS + ACASL + G Q+HA L + + DL GN+L+ MYA
Sbjct: 221 CFLSPTSIASALRACASLDHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYA-------- 271
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
KA + A +F +M ++ VS++AL++GY QNG E
Sbjct: 272 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA +F+ ++ +V P T +L+ AC++LA LQ GR +H V+ GL S+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL------ASETS 362
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ N+LIDMY KCG ++ ++F M RD VSWN MI G +G G EA LF +M G
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT I +L ACSH+GLV EG+ +F M +GL P +HY CMVDLL R G LDEA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I++MP++ D +W +LL AC+V++NI LG+ V++ + E+ P +G +VLLSN+Y+
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GR+ E VR + + +G K PGCSWIEI G ++ F+ D+ HP + EIY L + +
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 602
Query: 668 KRVGYVPNAS 677
K++GY P+ S
Sbjct: 603 KKLGYQPDTS 612
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 78/461 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARII----------KSQFASEIFIQNRLIDVYAKC 67
++S LL + +++ VHA I KS+ + + L+D+YAKC
Sbjct: 112 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 171
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L AR+VFD M +N TW+++I G + + A LF +M + C
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF--------- 222
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
LS S SAL ACA +MG Q+HALL+KS +D+
Sbjct: 223 ---------------------LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 261
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
G++L+ MY K G + A +FD M ++ VS+++L++ Y QNG A +A VF +M A
Sbjct: 262 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 321
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EPD T+ S++ AC+ LAA + G H ++ L ++ + NAL+DMYAKCG+++ +
Sbjct: 322 VEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLS 380
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VF+ MP R++VS +M++GY +G +
Sbjct: 381 RQVFNMMPSRDIVSWNTMIAGYGI-------------------------------HGLGK 409
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA LF + P TF LL+AC++ + L + + HV+ HG E I
Sbjct: 410 EATALFLEMNNLGFPPDGVTFICLLSACSH-SGLVIEGKHWFHVMGHGYGLTPRMEHYI- 467
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D+ + G +++ ++M R D W A++ C
Sbjct: 468 ---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 505
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L FL + A L +C + ++HA + KS +++ N L+ +YAK G + A
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 279
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FD+M+ K+ ++++++ SG+ Q+ R
Sbjct: 280 IALFDEMAVKDTVSYSALV-------------------------------SGYVQNGRAE 308
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA F KM + N + S + AC+ + G H + +S+ + +ALI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGR+ +R+VF+ M R+IVSWN++I Y +G +A +F+ M G PD V
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++SAC+ EG + L + +VD+ ++ G L+EA
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488
Query: 314 MPIR 317
MP+R
Sbjct: 489 MPLR 492
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 192/482 (39%), Gaps = 105/482 (21%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ + P+ T + AC++LA G IH + L+ DL + AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIH-AGLQADLFVSTALLDMYVKCA 59
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L +A +F MP R++V+ WNA++AGY
Sbjct: 60 CLPDAAHIFATMPARDLVA-------------------------------WNAMLAGYAH 88
Query: 363 NGENEEALG--LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK---HGLR 417
+G A+ L ++ + P T LL A L G H + ++ H R
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 418 FLSGEESD-IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+ +D + +G +L+DMY KCGS+ R+F+ M R+ V+W+A+I G T+A
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 477 LGLFKKML---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
LFK ML LC P ++ L AC+ + G + + ++K A L +
Sbjct: 209 FLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNS- 265
Query: 534 MVDLLGRAGCLDEAKTLIEAMP----------------------------------MQPD 559
++ + +AG +D+A L + M ++PD
Sbjct: 266 LLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPD 325
Query: 560 AVIWGSLLAACK-----VHRNIMLGEYVAKKLL-EIEPSNSGPYVLLSNMYAELGRWGEV 613
A SL+ AC H G + + L E N+ L +MYA+ GR
Sbjct: 326 AATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-----LIDMYAKCGRIDLS 380
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+V +M R +V SW N + H L KE L EM +G+
Sbjct: 381 RQVFNMMPSRDIV-----SW-------NTMIAGYGIHGLGKEA----TALFLEMNNLGFP 424
Query: 674 PN 675
P+
Sbjct: 425 PD 426
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/506 (42%), Positives = 306/506 (60%), Gaps = 7/506 (1%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+HA L K+ S + + S A+ +F + + WN+ + + +
Sbjct: 33 QLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGD 92
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+DA+ +F R+ I PD T + V+ AC+ L + G +H + + L++++ L
Sbjct: 93 SPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKL-GLQSNMFLQ 151
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N +V +YA CG++ AR VFD+MP R+V++ M++ K + A +F +M ERNV
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW ++I GY Q G+++EA+ LF ++ + P T +L ACA++ +L LGR+ H
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ SG E +I V N+LIDMY+KCG +ED CRIF+ M ER VSW+AMI G A +G
Sbjct: 272 NR------SGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG 325
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+AL LF KM+ G KP+ VT IG+L ACSH G+VE+GRKYF+SM++++G+ P +HY
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHY 385
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDL RAG L EA I MP+ P+ V+WG+LL CKVH+NI L E + L +++P
Sbjct: 386 GCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDP 445
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
N G YV+LSN+YAE GRW +V RVRKLMR RGV K PG S I + G V F+ D HP
Sbjct: 446 LNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHP 505
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI+ + L + MK GYVPN S
Sbjct: 506 QTEEIFQTWEKLLQRMKLKGYVPNTS 531
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 169/292 (57%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C R V + + VH + K S +F+QN ++ +YA CG + ARKVFDKM ++
Sbjct: 119 VLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRD 178
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V TWN +I L+K G + A +LFA MPER+ SW SM+ G+AQ + EA+ F++M
Sbjct: 179 VITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+E + + L ACA + +G ++H ++S Y ++ + + LIDMY KCG +
Sbjct: 239 AGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A R+FD M ER +VSW+++I +G A DAL +F +M+ +G++P+ VT ++ AC+
Sbjct: 299 ACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSH 358
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ ++G + A + R + + +VD++++ G L EA MPI
Sbjct: 359 MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPI 410
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 181/396 (45%), Gaps = 69/396 (17%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F + + WN+ + FA+ D ++A+ F ++ + + Y+ L AC+
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN-- 221
+D + G VH + K S++++ + ++ +Y CG + AR+VFD M +R++++WN
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 222 -----------------------------SLITCYEQNGPASDALEVFVRMMASGIEPDE 252
S+I Y Q G + +A+++F+ M +G+ P+E
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
VT+ +V+ ACA + G +IH R +N + + N L+DMY KCG L +A +FD
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN-IRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R VVS ++M++G A +G E+AL L
Sbjct: 305 NMEERTVVSWSAMIAGLA-------------------------------AHGRAEDALAL 333
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + V P TF +L+AC+++ ++ GR+ + + G I +
Sbjct: 334 FNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD-----YGIVPRIEHYGCM 388
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+D++ + G +++ M + + V W A++ GC
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/635 (36%), Positives = 342/635 (53%), Gaps = 96/635 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I K S F+ LID Y+ CG + AR+VFD G+L
Sbjct: 161 IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFD---------------GILY--- 202
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D SW MV+ FA++D F EAL F +M F + ++F S A
Sbjct: 203 -------------KDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKA 249
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C G F +G VH KSRY D+Y+G AL+D+Y K G + AR F+ + +++++ W
Sbjct: 250 CLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPW 309
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ +I Y Q+ + +A+E+F +M + + P++ T ASV+ ACA++ G QIH +++
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK 369
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L +D+ + NAL+D+YAKCG++ + +F P RN
Sbjct: 370 I-GLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRN---------------------- 406
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+V WN +I G+ Q G+ E+AL LF + V T T+ + L ACA+LA
Sbjct: 407 --------DVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 458
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G Q H+ VK + DI V N+LIDMY KCGS++D +F+ M ++D VSW
Sbjct: 459 LEPGLQIHSLTVKTTF------DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSW 512
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NAMI G + +G AC++AGL+++G+ YF+SM +
Sbjct: 513 NAMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSMIQ 544
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+HG+ P +HYTCMV LLGR G LD+A LI+ +P QP ++W +LL AC +H +I LG
Sbjct: 545 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGR 604
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A+ +LE+EP + +VLLSNMYA RW V VRK M+++GV K+PG SWIE G V
Sbjct: 605 ISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTV 664
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ F V D HP + I +L+ L + K+ GY+PN
Sbjct: 665 HSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPN 699
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 192/427 (44%), Gaps = 39/427 (9%)
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
H + +++ +AL C + G +H + K D++ + L++MY K +
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A ++FD M ERN +S+ +LI Y ++ +A+E+FVR+ G E + +++
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLL 149
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
S+ + G IHA + + N V G AL+D Y+ CG+
Sbjct: 150 VSMDCGELGWGIHACIFKLGHESNAFV-GTALIDAYSVCGR------------------- 189
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
V AR +F +L +++VSW ++ + +N +EAL LF ++
Sbjct: 190 ------------VDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P ++TF ++ AC L +G+ HG S E D++VG +L+D+Y K G +
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSV------HGCALKSRYELDLYVGVALLDLYTKSGDI 291
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+D FE + ++D + W+ MI AQ+ EA+ +F +M P+ T VL AC
Sbjct: 292 DDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQAC 351
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ + G + + K GL ++D+ + G ++ + L P + D
Sbjct: 352 ATMEGLNLGNQIHCHVIKI-GLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTP 410
Query: 563 WGSLLAA 569
W +++
Sbjct: 411 WNTVIVG 417
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 40/251 (15%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ L + FA +L +C + ++ ++H +IK S++F+ N L+DVYAKCG
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390
Query: 69 CLYGARKVFDKMSNKN-VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ + +F + ++N V WN++I G ++ G + A RLF +M E
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLE-------------- 436
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Y V+ +E ++ SAL ACA + G Q+H+L K+ + D+
Sbjct: 437 ----------YRVQA-------TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIV 479
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA-------SDALEVF 240
+ +ALIDMY KCG + AR VFD M +++ VSWN++I+ Y +G A F
Sbjct: 480 VTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAYF 539
Query: 241 VRMMAS-GIEP 250
M+ GIEP
Sbjct: 540 TSMIQDHGIEP 550
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/654 (35%), Positives = 356/654 (54%), Gaps = 77/654 (11%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
KLL + KS + +++HA+++ + F+ +++ID+ L A VF++++
Sbjct: 35 KLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLKD----LAYASLVFNQLTKP 90
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N++ +N ++ GL +W ++ + + K+
Sbjct: 91 NIYAFNVMLRGL--------------------ATTWK----------KYDFCVELYYKLK 120
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
S + +++ AC G H L+ K+ D Y+ +LI MY +CG +
Sbjct: 121 SLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMG 180
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR+VFD M +R++VSWNS+I+ Y + G +A+ +F+ M G EPDE+TL SV+ AC
Sbjct: 181 FARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACG 240
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L G + ++ +K+ + +G+AL+DMY KCG L AR VFD MP ++VV+
Sbjct: 241 DLGDLGLGRWVEGFVLE-KKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWN 299
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
++++GYA QNG + EA+ LF ++ P
Sbjct: 300 AIITGYA-------------------------------QNGASNEAIVLFNGMREAGPHP 328
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +L+AC+ + L LG+ TH + GL + D++V ++LIDMY KCGS++
Sbjct: 329 DRVTMIEVLSACSTIGALDLGKWVETHASEKGL------QHDVYVASALIDMYAKCGSLD 382
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIGVLCA 501
D R+FE+M ++ VSWNAMI A +G EAL LF++M +P+ +T IGVL A
Sbjct: 383 DAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSA 442
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C HAGLV+EGR+ F SM+ GL P +HY+CMVDL RAG L EA LI+ MP +PD +
Sbjct: 443 CVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEI 502
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+ GSLL AC+ RN +GE V + LE+E SNSG YV+ S +YA + RW + ++R LMR
Sbjct: 503 VLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMR 562
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ GV K PGCSWI+I HV+ F D H + IY ++L EMKR GY+PN
Sbjct: 563 QCGVSKTPGCSWIDIGAHVHEFHAGDSLHNHSMNIY---QLLNEEMKREGYIPN 613
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 145/302 (48%), Gaps = 37/302 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + R V +++ + ++ + LID+Y KCG L AR+VF
Sbjct: 228 DEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVF 287
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M NK+V TWN+IITG + G ++A LF M E
Sbjct: 288 DSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGP--------------------- 326
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
H + + E LSAC+ G++D + HA S+ DVY+ SALIDM
Sbjct: 327 -----HPDRVTMIE-----VLSACSTIGALDLGKWVETHA--SEKGLQHDVYVASALIDM 374
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEV 253
Y KCG + A RVF+ M +N VSWN++I+ +G A +AL +F RM ++P+++
Sbjct: 375 YAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDI 434
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T V+SAC EG Q+ + L + + +VD+ A+ G L EA + +
Sbjct: 435 TFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKK 494
Query: 314 MP 315
MP
Sbjct: 495 MP 496
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 361/663 (54%), Gaps = 42/663 (6%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L F LL +C+ + + + +HA KS ++ N +Y+KCG L+ A+
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F NVF++N++I K I A R+F +P+ D S+N++++ +A L
Sbjct: 67 FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F ++ L ++ ++AC D + Q+H + + + +A++ Y
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACY 184
Query: 197 GKCGRVSCARRVFDGMRE---RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
+ G +S ARRVF M E R+ VSWN++I Q+ +A+ +F M+ G++ D
Sbjct: 185 SRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ASV++A + G Q H +++ N V G+ L+D+Y+KC
Sbjct: 245 TMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHV-GSGLIDLYSKC------------ 291
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGL 372
A S+ R +F ++ ++V WN +I+G++ + +E+ L
Sbjct: 292 ------------------AGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWC 333
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
FR ++R P +F + +AC+NL+ LG+Q H +K + + + + V N+L
Sbjct: 334 FREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPY-----NRVSVNNAL 388
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+ MY KCG+V D R+F+TM E + VS N+MI G AQ+G E+L LF+ ML P+
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNS 448
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T I VL AC H G VEEG+KYF+ M + + P +HY+CM+DLLGRAG L EA+ +IE
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIE 508
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP P ++ W +LL AC+ H N+ L A + L +EP N+ PYV+LSNMYA RW E
Sbjct: 509 TMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEE 568
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V++LMR+RGV K+PGCSWIEI V+VF+ +D HP+ KEI++ + + ++MK+ GY
Sbjct: 569 AATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGY 628
Query: 673 VPN 675
VP+
Sbjct: 629 VPD 631
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 231/513 (45%), Gaps = 41/513 (7%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ L +F + L AC D G +HAL KS Y+ + +Y KCG + A
Sbjct: 4 TYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA 63
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
+ F + N+ S+N+LI Y ++ A VF DE+ +VS +
Sbjct: 64 QTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVF----------DEIPQPDIVSYNTLI 113
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVL---GNALVDMYAKCGK----LNEARCVFDRMPIRN 318
AA+ + + L E++R +L L G L + CG + + C
Sbjct: 114 AAYADRGECGPTLRLFEEVR-ELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDC 172
Query: 319 VVS-ETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFR 374
S ++++ Y++ + AR +F +M E R+ VSWNA+I Q+ E EA+GLFR
Sbjct: 173 YASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFR 232
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ R + +T ++L A + DL GRQ H ++K SG + VG+ LID
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIK------SGFHGNSHVGSGLID 286
Query: 435 MYMKC-GSVEDGCRIFETMVERDWVSWNAMIVGCA-QNGYGTEALGLFKKMLLCGEKPDH 492
+Y KC GS+ + ++FE + D V WN MI G + + L F++M G +PD
Sbjct: 287 LYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDD 346
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+ + V ACS+ G++ + K +V + + G + +A+ + +
Sbjct: 347 CSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFD 406
Query: 553 AMPMQPDAVIWGSLLAACKVH----RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELG 608
MP + + V S++A H ++ L E + +K +I P NS ++ + + G
Sbjct: 407 TMP-EHNTVSLNSMIAGYAQHGVEVESLRLFELMLEK--DIAP-NSITFIAVLSACVHTG 462
Query: 609 RWGEVVRVRKLMRKRGVVKQPGCSW---IEILG 638
+ E + +M++R ++ + I++LG
Sbjct: 463 KVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLG 495
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 356/670 (53%), Gaps = 84/670 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA L +C R +H I + +++F+ L+D+Y KC CL
Sbjct: 129 PFA--LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL---------- 176
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
DA+ +FA+MP RD +WN+M++G+A H + A+ + +
Sbjct: 177 ---------------------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLL 215
Query: 141 KMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALL----------SKSRYSSDVYM 188
M + L + + + L A GT VHA SKS+ + V +
Sbjct: 216 SMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLL 275
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL+DMY KCG + ARRVFD M RN V+W++LI + + A +F M+A G+
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 249 -EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++AS + ACASL + G Q+HA L + + DL GN+L+ MYA
Sbjct: 336 CFLSPTSIASALRACASLDHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYA-------- 386
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
KA + A +F +M ++ VS++AL++GY QNG E
Sbjct: 387 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA +F+ ++ +V P T +L+ AC++LA LQ GR +H V+ GL S+
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL------ASETS 477
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ N+LIDMY KCG ++ ++F M RD VSWN MI G +G G EA LF +M G
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT I +L ACSH+GLV EG+ +F M +GL P +HY CMVDLL R G LDEA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I++MP++ D +W +LL AC+V++NI LG+ V++ + E+ P +G +VLLSN+Y+
Sbjct: 598 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 657
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GR+ E VR + + +G K PGCSWIEI G ++ F+ D+ HP + EIY L + +
Sbjct: 658 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 717
Query: 668 KRVGYVPNAS 677
K++GY P+ S
Sbjct: 718 KKLGYQPDTS 727
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 218/461 (47%), Gaps = 78/461 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARII----------KSQFASEIFIQNRLIDVYAKC 67
++S LL + +++ VHA I KS+ + + L+D+YAKC
Sbjct: 227 NASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC 286
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L AR+VFD M +N TW+++I G + + A LF +M + C
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF--------- 337
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
LS S SAL ACA +MG Q+HALL+KS +D+
Sbjct: 338 ---------------------LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
G++L+ MY K G + A +FD M ++ VS+++L++ Y QNG A +A VF +M A
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN 436
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+EPD T+ S++ AC+ LAA + G H ++ L ++ + NAL+DMYAKCG+++ +
Sbjct: 437 VEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLS 495
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VF+ MP R++VS +M++GY +G +
Sbjct: 496 RQVFNMMPSRDIVSWNTMIAGYGI-------------------------------HGLGK 524
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA LF + P TF LL+AC++ + L + + HV+ HG E I
Sbjct: 525 EATALFLEMNNLGFPPDGVTFICLLSACSH-SGLVIEGKHWFHVMGHGYGLTPRMEHYI- 582
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D+ + G +++ ++M R D W A++ C
Sbjct: 583 ---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGAC 620
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L FL + A L +C + ++HA + KS +++ N L+ +YAK G + A
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 394
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FD+M+ K+ ++++++ SG+ Q+ R
Sbjct: 395 IALFDEMAVKDTVSYSALV-------------------------------SGYVQNGRAE 423
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA F KM + N + S + AC+ + G H + +S+ + +ALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGR+ +R+VF+ M R+IVSWN++I Y +G +A +F+ M G PD V
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++SAC+ EG + L + +VD+ ++ G L+EA
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603
Query: 314 MPIR 317
MP+R
Sbjct: 604 MPLR 607
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 20/243 (8%)
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEA--LGLFRLLKRESVCPTHYTFGNLLNAC 395
A +F ++ +V ++N LI Y+ + A L L+R + R V P +YTF L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ LAD GR H H + GL ++D+FV +L+DMY+KC + D IF TM R
Sbjct: 136 SALADHHCGRAIHRHAIHAGL------QADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 456 DWVSWNAMIVGCAQNGYGTEALG--LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D V+WNAM+ G A +G A+ L +M + +P+ T++ +L + G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 514 YFSS------MSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+ + + L D T ++D+ + G L A+ + +AMP + + V W
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 565 SLL 567
+L+
Sbjct: 309 ALI 311
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/689 (35%), Positives = 370/689 (53%), Gaps = 83/689 (12%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCG 68
++ D + + F ++ +CL+ + ++K+ F S + + LID++ K G
Sbjct: 147 LLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVK-G 205
Query: 69 C----LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
C L ARKVFDKM KNV TW +IT L ++G+ D+A LF M +VS
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEM----------LVS 255
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
DRF + +S CA +G ++H+ + +S
Sbjct: 256 SGYVPDRF--------------------TLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA--SDALEVFVR 242
D+ +G +L+DMY KCG V AR+VFDGMRE N++SW +L+ Y + G +A+ +F
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSN 355
Query: 243 M-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M + G+ P+ T + V+ ACASL F G Q+H + ++ D V GN LV +YAK
Sbjct: 356 MLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCV-GNGLVSVYAKS 414
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G++ AR FD + +N+VSET + ++VK L + L+R V Y
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVV-----DDTNVKDFNLNSEQDLDREV--------EYV 461
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+G + +T+ +LL+ A + + G Q H VVK G R
Sbjct: 462 GSG------------------VSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR---- 499
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D+ V N+LI MY KCG+ E ++F M + + ++W ++I G A++G+ ++AL LF
Sbjct: 500 --TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFY 557
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
ML G KP+ VT I VL ACSH GL++E K+F+SM HG+ P +HY CMVDLLGR+
Sbjct: 558 NMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRS 617
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G L EA I +MP DA++W + L +C+VHRN LGE+ AK +LE EP + Y+LLS
Sbjct: 618 GLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLS 677
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+YA GRW +V +RK M+++ + K+ G SWIE+ V+ F V D HP ++IY L
Sbjct: 678 NLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLD 737
Query: 662 MLTREMKRVGYVPNAS------DDEAYEE 684
L ++K VGYVPN +DE E+
Sbjct: 738 ELALKIKNVGYVPNTDFVLHDVEDEQKEQ 766
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 211/442 (47%), Gaps = 72/442 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL C+R+K+ + +H ++ S + + N LI +Y+K A +F M N
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENS- 116
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+RD S++S++S FA + +A+ F ++
Sbjct: 117 ----------------------------KRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148
Query: 145 ENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGK---C 199
++ +EY F + + AC FK G + + K+ Y S V +G LIDM+ K
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSL 208
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASV 258
+ AR+VFD MRE+N+V+W +IT Q G +A+++F+ M+ +SG PD TL +
Sbjct: 209 ADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGL 268
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S CA + G ++H+ ++R L DL +G +LVDMYAKCG + EAR VFD M N
Sbjct: 269 ISVCAEIQFLSLGKELHSWVIR-SGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHN 327
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLK 377
V+S T++V+GY + G EA+ +F +L
Sbjct: 328 VMSWTALVNGYVRGGG-----------------------------GYEREAMRMFSNMLL 358
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V P +TF +L ACA+L D G Q H +K GL + VGN L+ +Y
Sbjct: 359 QGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC------VGNGLVSVYA 412
Query: 438 KCGSVEDGCRIFETMVERDWVS 459
K G +E + F+ + E++ VS
Sbjct: 413 KSGRMESARKCFDVLFEKNLVS 434
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 194/407 (47%), Gaps = 48/407 (11%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR--ER 215
L C + + +G +H L+ S D + ++LI +Y K A +F M +R
Sbjct: 59 LKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKR 118
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++VS++S+I+C+ N A+E+F +++ G+ P+E +V+ AC FK GL +
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAK---CGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+++ + + +G L+DM+ K L AR VFD+M +NVV
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVV----------- 227
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGN 390
+W +I Q G N+EA+ LF +L P +T
Sbjct: 228 --------------------TWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTG 267
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L++ CA + L LG++ H+ V++ GL D+ VG SL+DMY KCG V++ ++F+
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVL------DLCVGCSLVDMYAKCGLVQEARKVFD 321
Query: 451 TMVERDWVSWNAMIVGCAQ--NGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGL 507
M E + +SW A++ G + GY EA+ +F MLL G P+ T GVL AC+
Sbjct: 322 GMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPD 381
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ G + K GL+ + +V + ++G ++ A+ + +
Sbjct: 382 FDFGEQVHGQTIKL-GLSAIDCVGNGLVSVYAKSGRMESARKCFDVL 427
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 331/569 (58%), Gaps = 47/569 (8%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS+++ A+ EAL F + + SF + +C+ D G H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ +D+++ SALIDMY KCG++ AR +FD + RN+VSW S+IT Y QN A +AL
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNAL 1228
Query: 238 EVFVRMM--------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
+F + + + D V + SV+SAC+ ++ +H +++ + +
Sbjct: 1229 LLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVK-KGFDGSIG 1287
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GN L+D YAKCG+ ++ VFD M E++
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWME-------------------------------EKD 1316
Query: 350 VVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+SWN++IA Y Q+G + EAL +F +++ V T +L ACA+ L+ G+ H
Sbjct: 1317 DISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIH 1376
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
V+K L E ++ VG S+IDMY KCG VE + F+ M E++ SW AM+ G
Sbjct: 1377 DQVIKMDL------EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 1430
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G EAL +F KM+ G KP+++T + VL ACSHAGLVEEG +F++M ++ + P
Sbjct: 1431 MHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 1490
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+HY CMVDL GRAGCL+EA LI+ M M+PD V+WGSLL AC++H+N+ LGE A+KL E
Sbjct: 1491 EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 1550
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++P N G YVLLSN+YA+ GRW +V R+R LM+ R +VK PG S +E+ G V+VF+V DK
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDK 1610
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP ++ IY L+ LT E++++GYVPN +
Sbjct: 1611 EHPHHEMIYKYLEKLTLELQKIGYVPNMT 1639
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 222/382 (58%), Gaps = 7/382 (1%)
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+FK Q+HA + +S S+D + LI +Y GR++ A +F ++ +WN +I
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
NG + AL ++ M+ GI D+ T V+ AC + + G +H L++
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFS 157
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D+ + N L+D Y KCG A VF++M +RNVVS T+++SG ++ AR +F ++
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+NVVSW A+I GY +N + EEAL LF+ ++ E++ P YT +L+ AC + L LGR
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H + +K+ + E +++G +LIDMY KCGS++D +FETM + +WN+MI
Sbjct: 278 GIHDYAIKNCI------EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
+G G EAL LF +M KPD +T IGVLCAC H V+EG YF+ M++ +G+A
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 526 PLKDHYTCMVDLLGRAGCLDEA 547
P+ +HY CM +L R+ LDEA
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 159/290 (54%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S+ + VH +IK F+ ++F+QN LID Y KCG A KVF
Sbjct: 124 DKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVF 183
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM +NV +W ++I+GL+ G + +A R+F +P ++ SW +M++G+ ++ + EAL
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +EN +EY+ S + AC +G +H K+ VY+G+ALIDMY
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A VF+ M +++ +WNS+IT +G +AL +F M ++PD +T
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
V+ AC + KEG R+ + + + ++YA+ L+EA
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 212/458 (46%), Gaps = 78/458 (17%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S F + SC + R H + F +++F+ + LID+Y+KCG L
Sbjct: 1143 SSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQL--------- 1193
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
DA LF +P R+ SW SM++G+ Q+++ AL F
Sbjct: 1194 ----------------------KDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231
Query: 140 VKMHSE--------NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
E N L S LSAC+ + VH + K + + +G+
Sbjct: 1232 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 1291
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEP 250
L+D Y KCG+ +++VFD M E++ +SWNS+I Y Q+G + +ALEVF M+ G+
Sbjct: 1292 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 1351
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ VTL++V+ ACA A + G IH ++++ + L ++ +G
Sbjct: 1352 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMD-LEYNVCVG------------------- 1391
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
TS++ Y K V+ A+ F +M E+NV SW A++AGY +G +EAL
Sbjct: 1392 ------------TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEAL 1439
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F + R V P + TF ++L AC++ ++ G + +KH G E
Sbjct: 1440 DIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF-NAMKHKYDIEPGIEH----YG 1494
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D++ + G + + + + M ++ D+V W +++ C
Sbjct: 1495 CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 1532
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 99/422 (23%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL +C K+ R++HA+II+S +++ + +LI +Y+ G + A +F ++ N
Sbjct: 33 LLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
FTWN II + ++G ++ +AL + M
Sbjct: 90 TFTWNLIIRA--------------------------NTINGLSE-----QALMLYKNMVC 118
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--- 201
+ A +++F + AC + +G VH L K +S DV++ + LID Y KCG
Sbjct: 119 QGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 202 -----------------------VSC-----ARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+SC ARR+FD + +N+VSW ++I Y +N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGN 292
+ALE+F RM A I P+E T+ S++ AC + G IH ++ C ++ + LG
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI--GVYLGT 296
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
AL+DMY+KCG + +A VF+ MP +++ +
Sbjct: 297 ALIDMYSKCGSIKDAIEVFETMP-------------------------------RKSLPT 325
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN++I +G +EAL LF ++R +V P TF +L AC ++ +++ G T +
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385
Query: 413 KH 414
+H
Sbjct: 386 QH 387
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 39/362 (10%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ SWNS+I + G + +AL F + G+ P + + +C++L G H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ DL + +AL+DMY+KCG+L +AR +FD +P+RNVVS TSM++GY +
Sbjct: 1166 QQAF-VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+A L+F LE ++G N + +SV ++L+AC
Sbjct: 1225 DNALLLFKDFLEEET---------EVEDGNN---------VPLDSV-----VMVSVLSAC 1261
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ ++ + H VVK G + I VGN+L+D Y KCG ++F+ M E+
Sbjct: 1262 SRVSGKGITEGVHGFVVKKGF------DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK 1315
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGR-- 512
D +SWN+MI AQ+G EAL +F M+ G + + VT+ VL AC+HAG + G+
Sbjct: 1316 DDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCI 1375
Query: 513 -KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
M E+ + T ++D+ + G ++ AK + M + + W +++A
Sbjct: 1376 HDQVIKMDLEYNVCV----GTSIIDMYCKCGRVEMAKKTFDRM-KEKNVKSWTAMVAGYG 1430
Query: 572 VH 573
+H
Sbjct: 1431 MH 1432
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 32/307 (10%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
G+ LDS +L +C R T VH ++K F I + N L+D YAKCG
Sbjct: 1244 GNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
++KVFD W M E+D SWNSM++ +AQ
Sbjct: 1304 VSKKVFD-------------------W------------MEEKDDISWNSMIAVYAQSGL 1332
Query: 132 FSEALGYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
EAL F M + + + L ACA + + G +H + K +V +G+
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++IDMY KCGRV A++ FD M+E+N+ SW +++ Y +G A +AL++F +M+ +G++P
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T SV++AC+ +EG + + + +VD++ + G LNEA +
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512
Query: 311 FDRMPIR 317
RM ++
Sbjct: 1513 IKRMKMK 1519
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 156/365 (42%), Gaps = 84/365 (23%)
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
FK QIHA+++R L ND +L L+ +Y+ G+
Sbjct: 40 FKHLRQIHAKIIR-SGLSNDQLLTRKLIHLYSTHGR------------------------ 74
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+ A L+F ++ +WN +I T NG +E+AL L++ + + + +T
Sbjct: 75 -------IAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFT 127
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG------- 440
F ++ AC N + LG+ H ++K+G D+FV N+LID Y KCG
Sbjct: 128 FPFVIKACTNFLSIDLGKVVHGSLIKYGF------SGDVFVQNNLIDFYFKCGHTRFALK 181
Query: 441 ------------------------SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+++ RIF+ + ++ VSW AMI G +N EA
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK---EHGLAPLKDHY-- 531
L LFK+M P+ TM+ ++ AC+ G++ GR K E G+ Y
Sbjct: 242 LELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGV------YLG 295
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
T ++D+ + G + +A + E MP + W S++ + VH LG+ E+E
Sbjct: 296 TALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHG---LGQEALNLFSEMER 351
Query: 592 SNSGP 596
N P
Sbjct: 352 VNVKP 356
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 15/171 (8%)
Query: 342 FTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
F K +++ NV SWN++IA + G++ EAL F L++ + PT +F + +C+ L D
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L GR +H F+ G E+D+FV ++LIDMY KCG ++D +F+ + R+ VSW
Sbjct: 1158 LVSGRMSHQQA------FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSW 1211
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLL-------CGEKP-DHVTMIGVLCACS 503
+MI G QN AL LFK L P D V M+ VL ACS
Sbjct: 1212 TSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 13/199 (6%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ + F + L+ +C ++ R +H IK+ +++ LID+Y+KC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER-----DQCSWNSM 122
G + A +VF+ M K++ TWNS+IT L G +A LF+ M ER D ++ +
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFIGV 364
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALS----EYSFGSALSACAGSVD--FKMGTQVHAL 176
+ E YF +M ++++ ++ Y + L A + ++D FK +V +L
Sbjct: 365 LCACVHIKNVKEGCAYFTRM-TQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSL 423
Query: 177 LSKSRYSSDVYMGSALIDM 195
+ D A++ +
Sbjct: 424 ANSPSICFDARAKQAVLSI 442
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/474 (43%), Positives = 307/474 (64%), Gaps = 11/474 (2%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ SWNS+I ++G + +AL F M ++P+ T + +C++L G Q H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ + DL + +ALVDMY+KCG+L +AR +FD + RN+VS TSM++GY +
Sbjct: 100 QQAL-IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNA 394
A +F M ER+V+SWN++IA Y QNG + E++ +F R++K + T +L A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
CA+ +LG+ H V+K GL ES++FVG S+IDMY KCG VE + F+ M E
Sbjct: 219 CAHSGSQRLGKCIHDQVIKMGL------ESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 272
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
++ SW+AM+ G +G+ EAL +F +M + G KP+++T + VL ACSHAGL+EEG +
Sbjct: 273 KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 332
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F +MS E + P +HY CMVDLLGRAG L EA LI+ M ++PD V+WG+LL AC++H+
Sbjct: 333 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHK 392
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N+ LGE A+KL E++P N G YVLLSN+YA+ GRW +V R+R LM+ G+VK PG S +
Sbjct: 393 NVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 452
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD---DEAYEEQ 685
+I G V+VF+V D+ HP +++IY L+ L+ +++ VGYVP+ + D +EE+
Sbjct: 453 DIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEK 506
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 171/301 (56%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F + SC + R+ H + + F ++F+ + L+D+Y+KCG L AR +F
Sbjct: 75 NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 134
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++S++N+ +W S+ITG ++ A R+F M ERD SWNS+++ +AQ+ +E++
Sbjct: 135 DEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESME 194
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + + + + L ACA S ++G +H + K S+V++G+++IDMY
Sbjct: 195 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 254
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG+V AR+ FD MRE+N+ SW++++ Y +G A +ALEVF M +G++P+ +T
Sbjct: 255 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 314
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV++AC+ +EG + + + +VD+ + G L EA + M +
Sbjct: 315 SVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKL 374
Query: 317 R 317
R
Sbjct: 375 R 375
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 186/386 (48%), Gaps = 76/386 (19%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS+++ A+ EAL F M + + +F A+ +C+ +D G Q H
Sbjct: 43 SWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQA 102
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCAR------------------------------- 206
+ D+++ SAL+DMY KCG + AR
Sbjct: 103 LIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRAL 162
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASL 265
RVFDGM ER+++SWNS+I Y QNG +++++E+F RM+ G I + VTL++V+ ACA
Sbjct: 163 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 222
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ + G IH ++++ L +++ +G +++DMY KCGK+ AR FDRM +NV S ++M
Sbjct: 223 GSQRLGKCIHDQVIKM-GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
V+GY +G +EAL +F + V P +
Sbjct: 282 VAGYG-------------------------------MHGHAKEALEVFYEMNMAGVKPNY 310
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLIDMYMKCGSV 442
TF ++L AC++ L+ G H + +S E E + ++D+ + G +
Sbjct: 311 ITFVSVLAACSHAGLLEEGW--------HWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 362
Query: 443 EDGCRIFETMVER-DWVSWNAMIVGC 467
++ + + M R D+V W A++ C
Sbjct: 363 KEAFDLIKGMKLRPDFVVWGALLGAC 388
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/532 (39%), Positives = 316/532 (59%), Gaps = 7/532 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F + WN ++ G AQ D ++A+ ++ K +F L ACA
Sbjct: 505 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 564
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
G Q+H ++K SD+++ ++LI +Y CG + AR VFD M +++VSWNSL
Sbjct: 565 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSL 624
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y Q D L +F M G++ D+VT+ VVSAC L + R +
Sbjct: 625 ICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYC 683
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ D+ LGN LVD + + G+L A VF M +RN+V+ +M++ YAK + SAR +F
Sbjct: 684 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFD 743
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ +++++SW+++I+GY+Q +AL +FR ++R V P +++++CA+L L L
Sbjct: 744 QIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDL 803
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H +V ++ ++ +D + NSLIDMYMKCGS ++ ++F+ M E+D +SWN++
Sbjct: 804 GKWVHEYVRRNNIK------ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSI 857
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I+G A NG+ E+L LF+ ML G +P+ VT +GVL AC++A LVEEG +F SM + +
Sbjct: 858 IIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYS 917
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
L P HY C+VDLLGRAG L++A I MP+ PD V+W LL +C H ++ + E V
Sbjct: 918 LEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVT 977
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
KKL E+EPSNSG Y LLSN YA RW E + VR+ M V K PGCS +E
Sbjct: 978 KKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 242/424 (57%), Gaps = 13/424 (3%)
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +VFD R W++L+ Y DAL++F R D + ACA
Sbjct: 47 AHQVFD----RRPTPWHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACAG 101
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + +Q+H ++R + + ALV++Y CG L ++R F+ MP++N VS
Sbjct: 102 LGWPRCCMQLHGLVVR-KGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNV 160
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
+++G+A V+ ARL+F +M RNVVSW+ +I GYT+ EA+ LFR + E + P+
Sbjct: 161 VITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPS 220
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++ A +N+ + +G H + K GL + D+ VGNSLID+Y K GS+++
Sbjct: 221 EITVLAVVPALSNVGKILIGEALHGYCEKEGLVW------DVRVGNSLIDLYAKIGSIQN 274
Query: 445 GCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
R+F+ M++R + VSW ++I G A +G +A+ LF M G +P+ +T + VL ACS
Sbjct: 275 SLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACS 334
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GLVE+G +F SM E+ + P H+ C++D+LGRAG L EA+ +I P++ +A +W
Sbjct: 335 HGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVW 394
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
+LL C + + +GE KK+L +E G +V+LSNM EL R+ + VRKL+ +R
Sbjct: 395 RTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQR 454
Query: 624 GVVK 627
VK
Sbjct: 455 NSVK 458
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 218/486 (44%), Gaps = 100/486 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C R ++++ ++H I K S+IF+ N LI +YA CG L AR VF
Sbjct: 551 DNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVF 610
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M K+V +WNS+I G++Q +RF + L
Sbjct: 611 DEMVVKDVVSWNSLIC-------------------------------GYSQCNRFKDILA 639
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M +E + + +SAC D+ M + + DVY+G+ L+D +G
Sbjct: 640 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 699
Query: 198 KCGRVSCARRVFDGMRERNIV-------------------------------SWNSLITC 226
+ G++ A +VF M+ RNIV SW+S+I+
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 759
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q SDALE+F +M + ++PD + +ASVVS+CA L A G +H + R ++
Sbjct: 760 YSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRR-NNIKA 818
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D ++ N+L+DMY KCG EA VF M
Sbjct: 819 DTIMENSLIDMYMKCGSAKEALQVFKEMK------------------------------- 847
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E++ +SWN++I G NG +E+L LF+ + E P TF +L ACAN ++ G
Sbjct: 848 EKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLD 907
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR-IFETMVERDWVSWNAMIV 465
H +K R S E G ++D+ + G +E R I E ++ D V W ++
Sbjct: 908 -HFESMK---RLYSLEPQMKHYG-CVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLG 962
Query: 466 GCAQNG 471
C +G
Sbjct: 963 SCNTHG 968
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 264/552 (47%), Gaps = 37/552 (6%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H +++ F + ++ L++VY CGCL +R F++M KN +WN +ITG WG
Sbjct: 110 QLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWG 169
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
++ A LF MP R+ SW+ M+ G+ + R EA+ F +M +E + SE + + +
Sbjct: 170 EVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVP 229
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE-RNIV 218
A + +G +H K DV +G++LID+Y K G + + RVFD M + RN+V
Sbjct: 230 ALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLV 289
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I+ + +G + A+E+F M +GI P+ +T SV+ AC+ ++G+ +
Sbjct: 290 SWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSM 349
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKS 337
+ + D+ ++DM + G+L EA + P+ N +++ +K V+
Sbjct: 350 IYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEM 409
Query: 338 ARLMFTKM--LERN-----VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K+ LER VV N L T+ +A + +L+ + + + +
Sbjct: 410 GERTMKKILALEREFGGDFVVLSNML----TELRRFSDAEIVRKLVDQRNSVKSFF---- 461
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
N+ ++ ++ H + + GL S + +++ + ++F+
Sbjct: 462 ------NIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAH-----KVFD 510
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ WN +I G AQ+ +A+ +KK G PD++T +L AC+ + E
Sbjct: 511 QIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNE 570
Query: 511 GRKYFSSMSKEHGLAPLKDHYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL- 567
G + + ++K L L D + ++ L G L A+++ + M ++ D V W SL+
Sbjct: 571 GEQMHNHITK---LGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK-DVVSWNSLIC 626
Query: 568 --AACKVHRNIM 577
+ C ++I+
Sbjct: 627 GYSQCNRFKDIL 638
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
++L+ ++ +R W+AL+ Y+ ++AL LFR + + T Y F L ACA
Sbjct: 43 SQLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRHARWHAADDT-YAFTFALKACAG 101
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L + Q H VV+ G F + +V +L+++Y+ CG + D FE M ++
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQT------YVHTALVNVYILCGCLADSRMAFEEMPVKNA 155
Query: 458 VSWNAMIVGCAQ--------------------------NGYG-----TEALGLFKKMLLC 486
VSWN +I G A +GY EA+ LF++M+
Sbjct: 156 VSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAE 215
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G P +T++ V+ A S+ G + G KE GL ++DL + G +
Sbjct: 216 GISPSEITVLAVVPALSNVGKILIGEALHGYCEKE-GLVWDVRVGNSLIDLYAKIGSIQN 274
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + M + + V W S+++ +H
Sbjct: 275 SLRVFDEMLDRRNLVSWTSIISGFAMH 301
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/742 (33%), Positives = 382/742 (51%), Gaps = 102/742 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIK--SQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ +LL C+ +++ R++HA+I+K + FA +I+ +L+ YAKC + +F +
Sbjct: 13 YGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRR 72
Query: 80 MSNKNVFTWNS------------------------------------------------- 90
+ KNVF+W +
Sbjct: 73 VRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIG 132
Query: 91 -IITGLLKWGFI------DDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++ GL+ G++ + MP+R+ +WNSM+ G+ Q+ EA+ F +M
Sbjct: 133 KVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMR 192
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E ++ + S LSA A + G Q HA+ +GS+LI+ Y K G +
Sbjct: 193 EEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIE 252
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A VF M E+++V+WN LI+ Y Q G AL + M + D VTLA+++SA A
Sbjct: 253 DAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFA 312
Query: 264 SLAAFKEGLQIHARLMR-------------------CEKL-----------RNDLVLGNA 293
+ K G + H +R CEK+ DL+L N
Sbjct: 313 DMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNT 372
Query: 294 LVDMYAKCGKLNEARCVFDRMPIR----NVVSETSMVSGYAKASSVKSARLMFTKM---- 345
++ +A+ G EA +F +M + NV+S S++ G+ + V A+ MF +M
Sbjct: 373 MLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLG 432
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
++ N+V+W LI+G ++G EA+ F+ ++ V P + +L AC NLA LQ+GR
Sbjct: 433 VQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGR 492
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H ++++H L +LS I + SL+DMY KCG + R+F+ + +++ +NAMI
Sbjct: 493 ALHGYLIRHSL-YLS-----IPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMIS 546
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G A +G EAL L++ + G KPD++T L ACSHA +V EG + F M H +
Sbjct: 547 GFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNIN 606
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY CMV LL R G LDEA LI AMP +PD I GSLLAAC+ H I L EY++ +
Sbjct: 607 PSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQ 666
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
LL+++P NSG YV +SN YA GRW EV +VR+LM++RG+ K PGCSWI++ +NVF+
Sbjct: 667 LLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQVGEELNVFVA 726
Query: 646 KDKRHPLNKEIYLVLKMLTREM 667
DK HP +EIY L +L E+
Sbjct: 727 GDKSHPETEEIYTTLALLLMEI 748
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 251/544 (46%), Gaps = 70/544 (12%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALIDMYGKC 199
M +N + +G L C G Q+HA + K + ++ + Y+ + L+ Y KC
Sbjct: 1 MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ +F +R +N+ SW ++I + G +AL F M +G+ PD L +V+
Sbjct: 61 DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120
Query: 260 SACASLAAFKEGLQIHARLMRCEKL-----------------RNDLVLGNALVDMYAKCG 302
AC L + G +H L+ C + + + V N+++ Y + G
Sbjct: 121 KACGGLEWIRIGKVVHG-LVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNG 179
Query: 303 KLNEARCVFDRM------PIRNVVSE---------------------------------T 323
EA VF M P + +S +
Sbjct: 180 LNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGS 239
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S+++ Y+K ++ A +F++MLE++VV+WN LI+GY Q GE ++AL + L++ E++
Sbjct: 240 SLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRF 299
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T L++A A++ +L+LG++ H + +++ L ESD+ V +S++DMY KC +
Sbjct: 300 DSVTLATLMSAFADMRNLKLGKEGHCYCIRNNL------ESDVVVVSSIVDMYAKCEKIG 353
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
R+F + + +D + WN M+ A+ G+ EAL LF +M L P+ ++ ++
Sbjct: 354 CARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFL 413
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---MQPDA 560
++G V E + F M + G+ P +T ++ L R+G EA + M ++P+
Sbjct: 414 NSGQVNEAKDMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNV 472
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL-LSNMYAELGRWGEVVRVRKL 619
V +L AC ++ +G + L+ S P L +MYA+ G + RV +
Sbjct: 473 VSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDM 532
Query: 620 MRKR 623
+ +
Sbjct: 533 IPDK 536
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 156/340 (45%), Gaps = 39/340 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS A L+ + +++ + H I++ S++ + + ++D+YAKC + AR+V
Sbjct: 299 FDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRV 358
Query: 77 FDKMSNK-----------------------------------NVFTWNSIITGLLKWGFI 101
F+ K NV +WNS+I G L G +
Sbjct: 359 FNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQV 418
Query: 102 DDASRLFASMP----ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
++A +F M + + +W +++SG A+ EA+ F +M + S
Sbjct: 419 NEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGV 478
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L AC ++G +H L + + + ++L+DMY KCG A+RVFD + ++ +
Sbjct: 479 LLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKEL 538
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+N++I+ + +G A +AL ++ + G++PD +T + + AC+ EGL++
Sbjct: 539 PIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVD 598
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ + + +V + ++CG L+EA + MP +
Sbjct: 599 MVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYK 638
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/673 (34%), Positives = 357/673 (53%), Gaps = 71/673 (10%)
Query: 7 VKQIVGDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
V+ + G+ L D + +L C R V R+H +K + ++ + N L+D+Y+
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG ++ +A LF ++ SWN+M+ G
Sbjct: 181 KCG-------------------------------YLTEAQMLFDKNNRKNAVSWNTMIGG 209
Query: 126 FAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
EA F +M E+ ++E + + L AC + ++H + +
Sbjct: 210 LCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQY 269
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + + + Y KCG + CA RVF M + + SWN+LI QNG AL ++++M
Sbjct: 270 DELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMT 329
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
SG+ PD T+ S++ A A L + + G ++H ++R L D +G +L+ +Y CG
Sbjct: 330 YSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR-HGLEIDSFIGISLLSLYIHCG-- 386
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
E+S SARL+F M E++ VSWNA+I+GY+QNG
Sbjct: 387 -----------------ESS------------SARLLFDGMEEKSSVSWNAMISGYSQNG 417
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
E+AL LFR L + P+ ++L AC+ + L+LG++ H + +K L
Sbjct: 418 LPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLM------E 471
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+FV S IDMY K G +++ +F+ + +D SWNA+I +G G E++ LF++M
Sbjct: 472 DVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMR 531
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G+ PD T IG+L CSHAGLVEEG KYF+ M HG+ P +HY C++D+LGRAG L
Sbjct: 532 KVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRL 591
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
D+A L+ MP QPD+ +W SLL+ C+ + +G+ VA+KLLE+EP N YV LSN+Y
Sbjct: 592 DDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLY 651
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A GRW +V RVR++++ G+ K GCSWIE+ G V+ F+ D P +KE+ + + L
Sbjct: 652 AGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLE 711
Query: 665 REMKRVGYVPNAS 677
++M ++GY PN S
Sbjct: 712 KKMCKIGYKPNTS 724
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 256/495 (51%), Gaps = 47/495 (9%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF N++I K+GF+D A ++F MP R+ SWNS++SGF+++ + V+M
Sbjct: 65 DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124
Query: 144 S--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E + + L CA VD +MG ++H L K S DV + ++L+DMY KCG
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVS 260
++ A+ +FD +N VSWN++I G +A +F M M IE +EVT+ +++
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC ++ + ++H +R + D ++ N V YAKCG L A VF M
Sbjct: 245 ACLEISQLRSLKELHGYSIR-HGFQYDELVANGFVAAYAKCGMLICAERVFYSM------ 297
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
ET V+ SWNALI G QNG+ +AL L+ +
Sbjct: 298 -ETKTVN------------------------SWNALIGGCAQNGDPRKALNLYIQMTYSG 332
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T G+LL A A+L L+ G++ H V++HGL E D F+G SL+ +Y+ CG
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGL------EIDSFIGISLLSLYIHCG 386
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+F+ M E+ VSWNAMI G +QNG +AL LF+K++ G +P + ++ VL
Sbjct: 387 ESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLG 446
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQP 558
ACS + G++ K ++D + +D+ ++GC+ E++++ + +
Sbjct: 447 ACSQQSALRLGKETHCYALKA---LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLK-NK 502
Query: 559 DAVIWGSLLAACKVH 573
D W +++AA VH
Sbjct: 503 DLASWNAIIAAYGVH 517
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 227/446 (50%), Gaps = 44/446 (9%)
Query: 128 QHDRFSEALGYFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+++ +S+A+ FVK+ ++ F ++F + AC GS+D +G +H ++ K DV
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA- 245
++G+ALI MYGK G V A +VF M RN+VSWNS+I+ + +NG + D ++ V MMA
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 246 -SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G+ PD TL +V+ CA + G++IH ++ L D+ + N+LVDMY+KCG L
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKL-GLSEDVRVNNSLVDMYSKCGYL 185
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
EA+ +FD+ +N VS WN +I G G
Sbjct: 186 TEAQMLFDKNNRKNAVS-------------------------------WNTMIGGLCTKG 214
Query: 365 ENEEALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
EA LFR ++ +E + T N+L AC ++ L+ ++ H + ++HG ++
Sbjct: 215 YIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQY----- 269
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
D V N + Y KCG + R+F +M + SWNA+I GCAQNG +AL L+ +M
Sbjct: 270 -DELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQM 328
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
G PD T+ +L A +H + G++ + + HGL ++ L G
Sbjct: 329 TYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLR-HGLEIDSFIGISLLSLYIHCGE 387
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAA 569
A+ L + M + +V W ++++
Sbjct: 388 SSSARLLFDGME-EKSSVSWNAMISG 412
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/673 (34%), Positives = 353/673 (52%), Gaps = 89/673 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L +C ++ D RR H +K F++N L+ +Y KCG + A ++FD MS
Sbjct: 145 LASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMS 204
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMP----------------------------- 112
+ N ++ +++ GL + G +DDA RLFA M
Sbjct: 205 SPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVA 264
Query: 113 ------------------ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+ DQ NS++ +A+ + EA+ F M S +S S+
Sbjct: 265 RAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSS----VSIVSW 320
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
++ ++ +V L+ +S + + S ++ K V AR +FD + +
Sbjct: 321 NILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISK 380
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++ +WN+L++ Y Q D +E+F RM ++PD TLA ++S C+ L + G Q+
Sbjct: 381 PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQV 440
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H+ ++ L ND+ + + L+DMY+KCG+
Sbjct: 441 HSASVKL-LLHNDMFVASGLIDMYSKCGQ------------------------------- 468
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
V A+++F M ER+VV WN++I+G + NEEA F+ ++ + PT ++ +++N+
Sbjct: 469 VGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINS 528
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
CA L+ + GRQ H V+K G + +++VG+SLIDMY KCG+++D F M+
Sbjct: 529 CARLSSIPQGRQIHAQVLKDGY------DQNVYVGSSLIDMYAKCGNMDDARLFFNCMIV 582
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
++ V+WN MI G AQNG+G +A+ LF+ ML +KPD VT I VL CSH+GLV+E Y
Sbjct: 583 KNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAY 642
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F+SM +G+ PL +HYTC++D LGRAG E +I+ MP + DA++W LLAAC VH
Sbjct: 643 FNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHH 702
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N LGE+ AK L ++P N PYVLLSN+YA LGR G+ VR LM RGVVK G SW+
Sbjct: 703 NAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWV 762
Query: 635 EILGHVNVFMVKD 647
FMV D
Sbjct: 763 NHKDGARAFMVAD 775
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 286/573 (49%), Gaps = 66/573 (11%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
++ + A++ F+ NRL+++Y+ G A + F + NV+++N+ I+ + G + A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
L MP+R+ SWN++++ A+ D EAL + M E A + ++ S LSAC
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
G + H L K + ++ + L+ MY KCG V+ A R+FD M N VS+ +++
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA--------AFKEGLQIHA 276
Q+G DAL +F RM S I D V ++SV+ ACA A + IHA
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHA 275
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA------ 330
++R + +D +GN+L+DMYAK K++EA VF+ M ++VS +V+GY
Sbjct: 276 LVVR-KGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYE 334
Query: 331 -----------------------------KASSVKSARLMFTKMLERNVVSWNALIAGYT 361
KA V SAR MF K+ + +V +WN L++GY
Sbjct: 335 RALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYG 394
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q +++ + LFR ++ ++V P T +L+ C+ L L+LG+Q H+ VK L
Sbjct: 395 QEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLL----- 449
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D+FV + LIDMY KCG V IF M ERD V WN+MI G A + EA FK
Sbjct: 450 -HNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFK 508
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCM 534
+M G P + ++ +C+ + +GR+ + + LKD Y + +
Sbjct: 509 QMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQV--------LKDGYDQNVYVGSSL 560
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+D+ + G +D+A+ M ++ + V W ++
Sbjct: 561 IDMYAKCGNMDDARLFFNCMIVK-NIVAWNEMI 592
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 227/519 (43%), Gaps = 68/519 (13%)
Query: 170 GTQVHALLS-KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
G HAL + ++ +VY +A I + G ++ AR + M +RN VSWN++I
Sbjct: 59 GLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVA 118
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
++ +ALE++ M+ G+ P TLASV+SAC ++AA +G + H ++ L +
Sbjct: 119 RSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKV-GLDGNQ 177
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ N L+ MY KCG SV A +F M
Sbjct: 178 FVENGLLGMYTKCG-------------------------------SVADAVRLFDWMSSP 206
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL--ADLQLGRQ 406
N VS+ A++ G Q+G ++AL LF + R ++ ++L ACA D + R
Sbjct: 207 NEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARA 266
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H L G +SD VGNSLIDMY K +++ ++FE+M VSWN ++ G
Sbjct: 267 IRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTG 326
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
Q G AL + M G +P+ VT +L +C A V R F +SK P
Sbjct: 327 YGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISK-----P 381
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ ++ G+ + L M +QPD +L+ C + LG+ V
Sbjct: 382 SVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVH 441
Query: 584 KKLLEIEPSN-----SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
+++ N SG L +MY++ G+ G + +M +R VV W ++
Sbjct: 442 SASVKLLLHNDMFVASG----LIDMYSKCGQVGIAQIIFNMMTERDVV-----CWNSMIS 492
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ + H LN+E + K +M+ G P S
Sbjct: 493 GLAI-------HSLNEEAFDFFK----QMRENGMFPTES 520
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 149/301 (49%), Gaps = 31/301 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L +C R + ++VH+ +K +++F+ + LID+Y+KCG + A+ +F
Sbjct: 417 DRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIF 476
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M+ ++V WNS+I+GL A H EA
Sbjct: 477 NMMTERDVVCWNSMISGL-------------------------------AIHSLNEEAFD 505
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +E S+ S +++CA G Q+HA + K Y +VY+GS+LIDMY
Sbjct: 506 FFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYA 565
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR F+ M +NIV+WN +I Y QNG A+E+F M+ + +PD VT +
Sbjct: 566 KCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIA 625
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ C+ E + + +R + L+D + G+ E V D+MP +
Sbjct: 626 VLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYK 685
Query: 318 N 318
+
Sbjct: 686 D 686
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 57/339 (16%)
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L D L N LV++Y+ G A F +P NV S + +S +A + +AR +
Sbjct: 41 LAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLG 100
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+M +RN VSWN +IA ++ EAL ++R + +E + PT++T ++L+AC +A L
Sbjct: 101 RMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDD 160
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
GR+ H VK GL + + FV N L+ MY KCGSV D R+F+ M + VS+ AM
Sbjct: 161 GRRCHGLAVKVGL------DGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAM 214
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-------------------H 504
+ G AQ+G +AL LF +M + D V + VL AC+ H
Sbjct: 215 MGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIH 274
Query: 505 AGLV------------------------EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
A +V +E K F SMS ++ + +V G+
Sbjct: 275 ALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVS-----WNILVTGYGQ 329
Query: 541 AGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNI 576
GC + A +++ M +P+ V + ++LA+C R++
Sbjct: 330 LGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDV 368
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ+ + F S +A +++SC R S+ R++HA+++K + +++ + LID+YAKC
Sbjct: 508 KQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKC 567
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMV 123
G + AR F+ M KN+ WN +I G + GF + A LF M + D ++ +++
Sbjct: 568 GNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL 627
Query: 124 SGFAQHDRFSEALGYFVKMHS 144
+G + EA+ YF M S
Sbjct: 628 TGCSHSGLVDEAIAYFNSMES 648
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 362/671 (53%), Gaps = 55/671 (8%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGAR 74
++S+ + +D C + + +++HA ++++ + + ++L+ YA C CL A+
Sbjct: 70 VESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAK 126
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
VF+++ N++ WN+++ G+A ++
Sbjct: 127 NVFNQIPQPNLYC-------------------------------WNTLIRGYASSSDPTQ 155
Query: 135 ALGYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ F+ M HS + ++++F A + +G+ +H ++ K+ SSD+++ ++LI
Sbjct: 156 SFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLI 215
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
+ YG G A RVF M +++VSWN++I + G AL +F M ++P+ +
Sbjct: 216 NFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVI 275
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRND-----LVLGNALVDMYAKCGKLNEAR 308
T+ SV+SACA + G I C + N+ L+L NA++DMY KCG +N+A+
Sbjct: 276 TMVSVLSACAKKIDLEFGRWI------CSYIENNGFTEHLILNNAMLDMYVKCGCINDAK 329
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F++M +++VS T+M+ G+AK + A +F M + +WNALI+ Y QNG+
Sbjct: 330 DLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRV 389
Query: 369 ALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
AL LF ++ + P T L A A L + G H ++ KH + +
Sbjct: 390 ALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINL------NCH 443
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ SL+DMY KCG++ +F + +D W+AMI A G G AL LF ML
Sbjct: 444 LATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAY 503
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KP+ VT +LCAC+HAGLV EG + F M +G+ P HY C+VD+ GRAG L++A
Sbjct: 504 IKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKA 563
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ IE MP+ P A +WG+LL AC H N+ L E + LLE+EP N G +VLLSN+YA+
Sbjct: 564 ASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKA 623
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W +V +RKLMR V K+P CS I++ G V+ F+V D HP +++IY L ++ +
Sbjct: 624 GDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKF 683
Query: 668 KRVGYVPNASD 678
K +GY P+ S+
Sbjct: 684 KPIGYKPDMSN 694
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 205/489 (41%), Gaps = 101/489 (20%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F + F L + R K + +H +IK+ +S++FI N LI+ Y G A +
Sbjct: 170 FPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHR 229
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF M K+V +WN++I G D A LF M +D
Sbjct: 230 VFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKD-------------------- 269
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
VK + + S LSACA +D + G + + + + ++ + + +A++DM
Sbjct: 270 ----VKPNV-------ITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDM 318
Query: 196 YGKCGRVSCARRVFDGMRERNIVS-------------------------------WNSLI 224
Y KCG ++ A+ +F+ M E++IVS WN+LI
Sbjct: 319 YVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALI 378
Query: 225 TCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ YEQNG AL +F M ++ +PDEVTL + A A L A G IH + +
Sbjct: 379 SAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKK-HD 437
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ + L +L+DMYAKCG LN+A VF + ++V ++M+ A K+A +F+
Sbjct: 438 INLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFS 497
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
MLE Y + P TF N+L AC + +
Sbjct: 498 SMLE-----------AYIK--------------------PNAVTFTNILCACNHAGLVNE 526
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
G Q + L G I ++D++ + G +E E M + W A
Sbjct: 527 GEQLFEQ-----MEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGA 581
Query: 463 MIVGCAQNG 471
++ C+++G
Sbjct: 582 LLGACSRHG 590
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/670 (35%), Positives = 356/670 (53%), Gaps = 84/670 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA L +C R +H I + +++F+ L+D+Y KC CL
Sbjct: 129 PFA--LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL---------- 176
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
DA+ +FA+MP RD +WN+M++G+A H + A+ + +
Sbjct: 177 ---------------------PDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLL 215
Query: 141 KMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALL----------SKSRYSSDVYM 188
M + L + + + L A GT VHA SKS+ + V +
Sbjct: 216 SMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLL 275
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL+DMY KCG + ARRVFD M RN V+W++LI + + A +F M+A G+
Sbjct: 276 GTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL 335
Query: 249 -EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++AS + ACASL + G Q+HA L + + DL GN+L+ MYA
Sbjct: 336 CFLSPTSIASALRACASLDHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYA-------- 386
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
KA + A +F +M ++ VS++AL++GY QNG E
Sbjct: 387 -----------------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA +F+ ++ +V P T +L+ AC++LA LQ GR +H V+ GL S+
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL------ASETS 477
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ N+LIDMY KCG ++ ++F M RD VSWN MI G +G G EA LF +M G
Sbjct: 478 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 537
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT I +L ACSH+GLV EG+ +F M +GL P +HY CMVDLL R G LDEA
Sbjct: 538 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEA 597
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I++MP++ D +W +LL AC+V++NI LG+ V++ + E+ P +G +VLLSN+Y+
Sbjct: 598 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 657
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GR+ E VR + + +G K PGCSWIEI G ++ F+ D+ HP + EIY L + +
Sbjct: 658 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 717
Query: 668 KRVGYVPNAS 677
K++GY P+ S
Sbjct: 718 KKLGYQPDTS 727
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L FL + A L +C + ++HA + KS +++ N L+ +YAK G + A
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQA 394
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FD+M+ K+ ++++++ SG+ Q+ R
Sbjct: 395 IALFDEMAVKDTVSYSALV-------------------------------SGYVQNGRAE 423
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA F KM + N + S + AC+ + G H + +S+ + +ALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGR+ +R+VF+ M R+IVSWN++I Y +G +A +F+ M G PD V
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++SAC+ EG + L + +VD+ ++ G L+EA
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603
Query: 314 MPIR 317
MP+R
Sbjct: 604 MPLR 607
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 20/243 (8%)
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEA--LGLFRLLKRESVCPTHYTFGNLLNAC 395
A +F ++ +V ++N LI Y+ + A L L+R + R V P +YTF L AC
Sbjct: 76 AHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKAC 135
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+ LAD GR H H + GL ++D+FV +L+DMY+KC + D IF TM R
Sbjct: 136 SALADHHCGRAIHRHAIHAGL------QADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189
Query: 456 DWVSWNAMIVGCAQNGYGTEALG--LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D V+WNAM+ G A +G A+ L +M + +P+ T++ +L + G + +G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 514 YFSS------MSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+ S + + L D T ++D+ + G L A+ + +AMP + + V W
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWS 308
Query: 565 SLL 567
+L+
Sbjct: 309 ALI 311
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 350/661 (52%), Gaps = 70/661 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA LL + ++ + ++H+ II+ F++ + + N L+D Y K CL
Sbjct: 142 DHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL------- 194
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D AS+LF+ MP +D S+N M++G+ ++ EAL
Sbjct: 195 ------------------------DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALK 230
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + +F S ++F + L GS D G Q+H L K+ Y D+++ +AL+D Y
Sbjct: 231 LFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYS 290
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K + A+ +FD M E + VS+N +IT Y NG + ++F R+ + + A+
Sbjct: 291 KHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFAT 350
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S A G Q HA+ + + +++ +GNALVDMYAKC K +A +
Sbjct: 351 MLSVAAIELNLSMGRQTHAQAVVTTAV-SEVQVGNALVDMYAKCEKFEDANRI------- 402
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
F + RN V W A+I+ Y Q G +EEAL +F+ +
Sbjct: 403 ------------------------FANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE+V TF + L A ANLA + LG+Q H+ V++ GL S +F G+ L+DMY
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLL------SSVFSGSVLVDMYA 492
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
CGS++D +F+ M +R+ V WNA+I +QNG F M+ G PD V+ +
Sbjct: 493 NCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLS 552
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLVE+ YF+SM++ + L P + HY M+D+L R+G +EA+ LI MP +
Sbjct: 553 VLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFE 612
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRV 616
PD V+W S+L +C++H+N L + A +L +++ ++ YV +SN+YAE G+W +V
Sbjct: 613 PDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKV 672
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+K MR+RGV K SW+EI V+VF D+ HP ++I + L M + GY P+
Sbjct: 673 KKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDT 732
Query: 677 S 677
S
Sbjct: 733 S 733
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 257/529 (48%), Gaps = 40/529 (7%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
V ARI+K+ F EI N + + + AR++FD+M +N + N +++G +K
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ A LF SM R++ SW M+ G++Q+++ EA + +M +F + LS
Sbjct: 93 LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
+ K Q+H+ + + +S+ + + ++L+D Y K + A ++F M ++ VS+
Sbjct: 153 FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF 212
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N +IT Y + G +AL++F++M +P T A+++ G QIH ++
Sbjct: 213 NVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIK 272
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ D+ + NAL+D Y+K ++ A+ +FD MP
Sbjct: 273 TSYVW-DIFVANALLDFYSKHDYIDLAKNLFDEMP------------------------- 306
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
E + VS+N +I GY NG+ E++ LF+ L+ S ++ F +L+ A +
Sbjct: 307 ------ELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELN 360
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L +GRQ H V ++ S++ VGN+L+DMY KC ED RIF + R+ V W
Sbjct: 361 LSMGRQTHAQAV------VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPW 414
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+I Q G+ EAL +FK+M D T L A ++ V G++ SS+ +
Sbjct: 415 TAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR 474
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
GL + +VD+ G + +A + + MP + V W +L++A
Sbjct: 475 -LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISA 521
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 334/601 (55%), Gaps = 40/601 (6%)
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K KN F +S+I+ L+K+G I +A R+F MP +D WNS++ G+ Q F A
Sbjct: 158 EKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQ 217
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +MH S + S + AC G + K+G +H + +D+ + ++ +DMY
Sbjct: 218 LFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYS 277
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + AR VF M RN+VSWN++I+ +NG ++ ++F R++ S D T+ S
Sbjct: 278 KMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVS 337
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C+ A+ G +H +R ++L+L A+VD+Y+
Sbjct: 338 LLQGCSQTASLATGKILHGCAIR--SFESNLILSTAIVDLYS------------------ 377
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
K S+K A +F +M +RNV++W A++ G QNG E+AL LF ++
Sbjct: 378 -------------KCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQ 424
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E + TF +L+++CA+L L+ GR H H+ + G F DI +L+DMY
Sbjct: 425 EEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAF------DIVNMTALVDMYA 478
Query: 438 KCGSVEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG + RIF + +D V WN+MI G +G+G +A+G++ KM+ G KP+ T +
Sbjct: 479 KCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFL 538
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH+ LVE+G F+SM ++H + P++ HY C+VDLL RAG +EA+ LIE MP
Sbjct: 539 SLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPF 598
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QP + +LL+ C+ H+NI LG + KLL ++ N G Y++LSN+YAE RW +V +
Sbjct: 599 QPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYI 658
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R LMR RG+ K PG S +E V+ F D HP +EIY L+ L ++ GYVP+
Sbjct: 659 RGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDT 718
Query: 677 S 677
S
Sbjct: 719 S 719
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 198/435 (45%), Gaps = 83/435 (19%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+H ++ ++I + +D+Y+K G + AR VF KM +N+ +WN++I+G ++ G
Sbjct: 253 MHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGL 312
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ ++ LF + S F L+ + S L
Sbjct: 313 VGESFDLFHRLVRS-----------------------------SGGFDLT--TIVSLLQG 341
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C+ + G +H +S + S++ + +A++D+Y KCG + A VF+ M++RN+++W
Sbjct: 342 CSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITW 400
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+++ QNG A DAL +F +M GI + VT S+V +CA L + K G IH L R
Sbjct: 401 TAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR 460
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI-RNVVSETSMVSGYAKASSVKSAR 339
D+V ALVDMYAKCGK+N A +F I ++VV SM++GY
Sbjct: 461 L-GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG--------- 510
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+G +A+G++ + E + P TF +LL+AC
Sbjct: 511 ----------------------MHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSAC---- 544
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGN------SLIDMYMKCGSVEDGCRIFETM- 452
+H+ +V+ G+ + E D + L+D+ + G E+ + E M
Sbjct: 545 -------SHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMP 597
Query: 453 VERDWVSWNAMIVGC 467
+ A++ GC
Sbjct: 598 FQPGTAVLEALLSGC 612
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 181/402 (45%), Gaps = 51/402 (12%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
HA + + S+D ++ + L+ Y + AR VFD + + N+++ Y Q+G
Sbjct: 51 THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGR 110
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ LE+F M + +E D + + ACAS ++ G++I + + +N V G+
Sbjct: 111 YRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFV-GS 169
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
+++ K GK+ EA+ VFD MP ++VV S++ GY +A
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQA-------------------- 209
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
G + A LF + + P+ T +L+ AC + +L+LG+ H +V+
Sbjct: 210 -----------GCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
GL +DI V S +DMY K G +E +F M R+ VSWNAMI GC +NG
Sbjct: 259 GLGL------GNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGL 312
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH-- 530
E+ LF +++ D T++ +L CS + G+ HG A
Sbjct: 313 VGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKIL-------HGCAIRSFESN 365
Query: 531 ---YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
T +VDL + G L +A + M + + W ++L
Sbjct: 366 LILSTAIVDLYSKCGSLKQATFVFNRMK-DRNVITWTAMLVG 406
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 33/197 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F L+ SC S+ R +H + + FA +I L+D+YAKCG + A ++F
Sbjct: 431 NSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIF 490
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
S +K+V WNS+IT G+ H +A+
Sbjct: 491 SHGSISKDVVLWNSMIT-------------------------------GYGMHGHGYQAV 519
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA-LIDM 195
G + KM E ++ +F S LSAC+ S + G + + + + A L+D+
Sbjct: 520 GIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDL 579
Query: 196 YGKCGRVSCARRVFDGM 212
+ GR A+ + + M
Sbjct: 580 LSRAGRFEEAQALIEKM 596
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/526 (42%), Positives = 317/526 (60%), Gaps = 48/526 (9%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L+ C + G +VHA + K+ Y VY+ + LI +Y KC + CAR VFD MRERN+
Sbjct: 17 LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNV 76
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSW ++I+ Y Q G AS+AL +FV+M+ S EP+E T A+V+S+C + F+ G QIH+
Sbjct: 77 VSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSH 136
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+ + N + +G++L+DMYA KA +
Sbjct: 137 IFK-RNYENHIFVGSSLLDMYA-------------------------------KAGRIHE 164
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
AR +F + ER+VVS A+I+GY Q G +EEAL LF L+RE + + T+ +LL A +
Sbjct: 165 ARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSG 224
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
LA L G+Q H+HV++ L F + + NSLIDMY KCG++ +IF M R
Sbjct: 225 LAALDHGKQVHSHVLRCELPFY------VVLQNSLIDMYSKCGNLNYARKIFNNMPVRTV 278
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+SWNAM+VG +++G G E + LFK M + KPD VT + VL CSH GL ++G + F
Sbjct: 279 ISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFD 338
Query: 517 SMSK-----EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
M E G+ +HY C++DLLGRAG ++EA LI+ MP +P A IWGSLL AC+
Sbjct: 339 EMMNGGDEIEAGI----EHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACR 394
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH N +GE+V +LLEIEP N+G YV+LSN+YA GRW +V VR+LM ++ V+K+PG
Sbjct: 395 VHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGR 454
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SWIE+ ++ F D+ HP +E++L ++ L + K GYVP+ S
Sbjct: 455 SWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQS 500
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/492 (31%), Positives = 249/492 (50%), Gaps = 90/492 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL+ C+ ++V + +RVHA +IK+ + +++ RLI +Y KC CL AR VFD+M
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NV SW +M+SG++Q SEAL FV+
Sbjct: 73 ERNVV-------------------------------SWTAMISGYSQRGFASEALHLFVQ 101
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++F + LS+C G F++G Q+H+ + K Y + +++GS+L+DMY K GR
Sbjct: 102 MLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGR 161
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VF+ + ER++VS ++I+ Y Q G +ALE+F R+ G+ + VT AS+++A
Sbjct: 162 IHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTA 221
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LAA G Q+H+ ++RCE L +VL N+L+DMY+KCG LN AR +F+ MP+R V+S
Sbjct: 222 LSGLAALDHGKQVHSHVLRCE-LPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVIS 280
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERN-----VVSWNALIAGYTQNGENEEALGL---- 372
+M+ GY+K +F M E N V++ A+++G + G ++ L +
Sbjct: 281 WNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEM 340
Query: 373 ------------------------------FRLLKRESVCPTHYTFGNLLNACANLADLQ 402
F L+K+ PT +G+LL AC ++
Sbjct: 341 MNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTN 400
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI--DMYMKCGSVEDGCRIFETMVE------ 454
+G G R L E + GN +I ++Y G ED + E M+E
Sbjct: 401 IGEFV-------GCRLLEIEPEN--AGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKE 451
Query: 455 --RDWVSWNAMI 464
R W+ + I
Sbjct: 452 PGRSWIELDQTI 463
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 60/319 (18%)
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+ LLN C N ++ G++ H H++K + +++ LI +Y KC +
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIK------TCYLPPVYLSTRLIILYTKCECLGCARH 66
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M ER+ VSW AMI G +Q G+ +EAL LF +ML +P+ T VL +C+
Sbjct: 67 VFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSG 126
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQP----DA 560
E GR+ S + K + ++H + ++D+ +AG + EA+ + E +P + A
Sbjct: 127 FELGRQIHSHIFKRN----YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTA 182
Query: 561 VIWG---------SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP--------------- 596
+I G +L C++ R M YV L S
Sbjct: 183 IISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCE 242
Query: 597 ---YVLLSN----MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
YV+L N MY++ G ++ M R V+ SW N +V +
Sbjct: 243 LPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVI-----SW-------NAMLVGYSK 290
Query: 650 HPLNKEIYLVLKMLTREMK 668
H E+ + K++ E K
Sbjct: 291 HGKGIEVVKLFKLMREENK 309
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/564 (37%), Positives = 340/564 (60%), Gaps = 46/564 (8%)
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
A+H EAL F +M++ +++ +AL++CA +++ +G Q+HA + ++ + ++
Sbjct: 1292 AKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 1351
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ SAL+D+Y KC + A+RVFDGM + + VSW S+I+ + +NG +A+ F M+ S
Sbjct: 1352 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 247 GIEPDEVTLASVVSACASLAA-FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
I+P+ VT S +SAC L F + +HA +++ V+ + L+D Y+KCG+++
Sbjct: 1412 QIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVV-SCLIDCYSKCGRID 1470
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A L+F +ER+ + +N++I+GY+QN
Sbjct: 1471 QAV-------------------------------LLFGTTIERDNILFNSMISGYSQNLX 1499
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EEAL LF ++ + PT +T ++LNAC +L LQ GRQ H+ V K G ES+
Sbjct: 1500 GEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAK------MGSESN 1553
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+FV ++L+DMY KCGS+++ +F VE++ V W +MI G AQ+G G E LGLF++++
Sbjct: 1554 VFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVX 1613
Query: 486 C-GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G PDH+ VL AC+HAG +++G YF+ M +++GL P D Y C+VDL R G L
Sbjct: 1614 EEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHL 1673
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
+AK L+EA P +P++V+WGS L++CK++ LG A KL ++EP ++ PYV ++++Y
Sbjct: 1674 RKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIY 1733
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A+ G W EVV +RKLM+++G+ K G SW+E+ V+VF V D HP +++I + L+ L
Sbjct: 1734 AQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFXVADASHPRSRDICVELERLN 1793
Query: 665 REMKRVGYVPN------ASDDEAY 682
EMK VGY P + DDE +
Sbjct: 1794 LEMKEVGYTPQQXFELESVDDEQF 1817
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 229/491 (46%), Gaps = 78/491 (15%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L+SC + + ++HARII++ F +F+ + L+D+YAKC
Sbjct: 1323 LNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDA---------------- 1366
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
I DA R+F M + DQ SW S++SGF+++ R EA+ +F +M
Sbjct: 1367 ---------------IVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 146 NFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++ S +SAC G F +HA + K + ++ S LID Y KCGR+
Sbjct: 1412 QIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 1471
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +F ER+ + +NS+I+ Y QN +AL++FV M +G+ P + TL S+++AC S
Sbjct: 1472 AVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGS 1531
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L ++G Q+H+ + + N V+ +AL+DMY+KCG ++EARCVF + +N V TS
Sbjct: 1532 LTILQQGRQVHSLVAKMGSESNVFVV-SALLDMYSKCGSIDEARCVFXQAVEKNTVLWTS 1590
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCP 383
M++GYA Q+G E LGLF RL+ E P
Sbjct: 1591 MITGYA-------------------------------QSGRGPEGLGLFERLVXEEGFTP 1619
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
H F +L AC + L G +R G D+ L+D+Y++ G +
Sbjct: 1620 DHICFTAVLTACNHAGFLDKGIDYFNQ-----MRRDYGLVPDLDQYACLVDLYVRNGHLR 1674
Query: 444 DGCRIFETM-VERDWVSWNAMIVGCAQNG---YGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+ E E + V W + + C G G EA KM C P +V M +
Sbjct: 1675 KAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP-YVAMASIY 1733
Query: 500 CACSHAGLVEE 510
+ AGL E
Sbjct: 1734 ---AQAGLWSE 1741
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 169/346 (48%), Gaps = 36/346 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA ++K F + F+ + LID Y+KCG
Sbjct: 1440 LHAHVVKLGFGVKTFVVSCLIDCYSKCG-------------------------------R 1468
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
ID A LF + ERD +NSM+SG++Q+ EAL FV+M + ++++ S L+A
Sbjct: 1469 IDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNA 1528
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + G QVH+L++K S+V++ SAL+DMY KCG + AR VF E+N V W
Sbjct: 1529 CGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLW 1588
Query: 221 NSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
S+IT Y Q+G + L +F R++ G PD + +V++AC +G+ ++
Sbjct: 1589 TSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMR 1648
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSG---YAKASSV 335
R L DL LVD+Y + G L +A+ + + P N V S +S Y +A
Sbjct: 1649 RDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELG 1708
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ A KM + + A+ + Y Q G E + + +L+K++ +
Sbjct: 1709 REAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGL 1754
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+L++C + R+VH+ + K S +F+ + L+D+Y+KCG
Sbjct: 1522 LTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGS------------ 1569
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
ID+A +F E++ W SM++G+AQ R E LG F +
Sbjct: 1570 -------------------IDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFER 1610
Query: 142 M-HSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGSALI 193
+ E F F + L+AC AG +D F + + L+ D+ + L+
Sbjct: 1611 LVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLV------PDLDQYACLV 1664
Query: 194 DMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPAS---DALEVFVRMMASGIE 249
D+Y + G + A+ + + E N V W S ++ + G A +A + +M
Sbjct: 1665 DLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTA 1724
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
P V +AS+ A + E ++I +LM+ + LR
Sbjct: 1725 P-YVAMASIY---AQAGLWSEVVEIR-KLMKQKGLR 1755
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/652 (35%), Positives = 344/652 (52%), Gaps = 69/652 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C + + R++H+ IIK +F S +F+ N LID+YAK
Sbjct: 317 DEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKA---------- 366
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
G + +A + F M RD SWN+++ G+ Q + + A
Sbjct: 367 ---------------------GALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + E S S LSAC + G Q H L K ++++ GS+LIDMY
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYS 465
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A + + M ER++VS N+LI Y +++ + M G++P E+T AS
Sbjct: 466 KCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFAS 524
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C A GLQIH +++ L LG +L+ MY +L +A +F
Sbjct: 525 LIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEF--- 581
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
SS+KS +V W ALI+G+ QN ++ AL L+R ++
Sbjct: 582 ---------------SSLKS------------IVMWTALISGHIQNECSDVALNLYREMR 614
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
++ P TF +L ACA L+ L GR+ H+ L F +G + D ++L+DMY
Sbjct: 615 DNNISPDQATFVTVLQACALLSSLHDGREIHS------LIFHTGFDLDELTSSALVDMYA 668
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V+ ++FE + ++D +SWN+MIVG A+NGY AL +F +M PD VT +
Sbjct: 669 KCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFL 728
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL ACSHAG V EGR+ F M +G+ P DHY CMVDLLGR G L EA+ I+ + +
Sbjct: 729 GVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEV 788
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P+A+IW +LL AC++H + G+ AKKL+E+EP +S PYVLLSNMYA G W E +
Sbjct: 789 EPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSL 848
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
R+ M K+ + K PGCSWI + N+F+ D H EI LK LT +K
Sbjct: 849 RRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIK 900
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/589 (30%), Positives = 284/589 (48%), Gaps = 77/589 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA L +C + +++ R VH+ +IKS S F Q LI +YAKC L AR +F
Sbjct: 46 DQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIF 105
Query: 78 DKMSNKNVFT--WNSIITGLLKWGF----------------------------------I 101
++ T W ++I+G ++ G +
Sbjct: 106 ASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKL 165
Query: 102 DDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
DDA +LF MP R+ +WN M+SG A+ + EAL +F +M S + S LS
Sbjct: 166 DDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLS 225
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A A G VHA K + S +Y+ S+LI+MYGKC AR+VFD + ++N++
Sbjct: 226 AIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIV 285
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN+++ Y QNG S+ +E+F+ M++ GI PDE T S++S CA + G Q+H+ ++
Sbjct: 286 WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ ++ ++L + NAL+DMYAK G L EA F+ M R+ +S +++ G
Sbjct: 346 K-KRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVG----------- 393
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
Y Q A LFR + + + P + ++L+AC N+
Sbjct: 394 --------------------YVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIK 433
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L+ G+Q H VK GL E+++F G+SLIDMY KCG ++D + + +M ER VS
Sbjct: 434 VLEAGQQFHCLSVKLGL------ETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVS 487
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
NA+I G A E++ L +M + G KP +T ++ C + V G + ++
Sbjct: 488 VNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIV 546
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K L + T ++ + + L +A L V+W +L++
Sbjct: 547 KRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 244/504 (48%), Gaps = 57/504 (11%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN V G +H L ++ + + +++F LSACA + +G VH+ +
Sbjct: 16 WNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVI 74
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG--MRERNIVSWNSLITCYEQNGPASDA 236
KS S + ALI +Y KC ++CAR +F + VSW +LI+ Y Q G +A
Sbjct: 75 KSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEA 134
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
L +F +M S + PD+V L +V++A SL + Q+ ++ +RN +V N ++
Sbjct: 135 LHIFDKMRNSAV-PDQVALVTVLNAYISLGKLDDACQLFQQMPI--PIRN-VVAWNVMIS 190
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSE---------------------------------- 322
+AK EA F +M V S
Sbjct: 191 GHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFES 250
Query: 323 -----TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+S+++ Y K AR +F + ++N++ WNA++ Y+QNG + LF +
Sbjct: 251 SIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMI 310
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P +T+ ++L+ CA L++GRQ H+ ++K RF S++FV N+LIDMY
Sbjct: 311 SCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKK--RF----TSNLFVNNALIDMYA 364
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K G++++ + FE M RD +SWNA+IVG Q A LF++M+L G PD V++
Sbjct: 365 KAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLAS 424
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP-- 555
+L AC + ++E G++ F +S + GL + ++D+ + G + +A +MP
Sbjct: 425 ILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPER 483
Query: 556 --MQPDAVIWGSLLAACKVHRNIM 577
+ +A+I G L K N++
Sbjct: 484 SVVSVNALIAGYALKNTKESINLL 507
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V WN + G T++ +E L + P +TF L+ACA L +L LGR H+
Sbjct: 13 VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET--MVERDWVSWNAMIVGC 467
V+K GL ES F +LI +Y KC S+ IF + VSW A+I G
Sbjct: 72 CVIKSGL------ESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGY 125
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
Q G EAL +F KM PD V ++ VL A G +++ + F M
Sbjct: 126 VQAGLPHEALHIFDKM-RNSAVPDQVALVTVLNAYISLGKLDDACQLFQQM 175
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/672 (34%), Positives = 358/672 (53%), Gaps = 73/672 (10%)
Query: 9 QIVGDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++G+ L D +L C V +H +K + E+ + N ++ +Y+KC
Sbjct: 237 EMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKC 296
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L A+ F K +NKNV SWN+M+S F+
Sbjct: 297 GYLNEAQMSFVKNNNKNV-------------------------------VSWNTMISAFS 325
Query: 128 QHDRFSEALGYFVKMH--SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+EA +M E +E + + L AC + + ++H + +
Sbjct: 326 LEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH- 384
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
V + +A I Y KCG ++ A +VF G+ ++ + SWN+LI + QNG AL + +M
Sbjct: 385 VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTY 444
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
SG +PD T++S++ ACA L + + G +IH ++R L D +G +L+ Y CGK
Sbjct: 445 SGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLR-NGLETDFFVGTSLLSHYIHCGK-- 501
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
SAR++F +M ++N+VSWNA+I+GY+QNG
Sbjct: 502 -----------------------------ASSARVLFDRMKDKNLVSWNAMISGYSQNGL 532
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
E+L LFR E + ++ AC+ L+ L+LG++AH +V+K + + D
Sbjct: 533 PYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK------ALQTED 586
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
FVG S+IDMY K G +++ ++F+ + +++ SWNA+IV +G+G EA+ L+++M
Sbjct: 587 AFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKK 646
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G+ PD T IG+L AC HAGLVEEG KYF M + + P +HY C++D+L RAG LD
Sbjct: 647 VGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLD 706
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A L+ MP + D IW SLL +C+ + +GE VAKKLLE+EP + YVLLSN+YA
Sbjct: 707 DALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYA 766
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
LG+W V RVR++M++ G+ K GCSWIE+ G V F+V D P + EI ++ + L
Sbjct: 767 GLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEE 826
Query: 666 EMKRVGYVPNAS 677
+ +GY PN S
Sbjct: 827 RISEIGYKPNTS 838
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/568 (27%), Positives = 259/568 (45%), Gaps = 76/568 (13%)
Query: 10 IVGDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+V D F D+ F ++ +C V +H +IK ++F+ N L+ +Y KCG
Sbjct: 136 LVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCG 195
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ A KVFD M N+ +WNS+I + GF D+ L M
Sbjct: 196 AVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM----------------- 238
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ E + + L CAG + +G +H L K S +V +
Sbjct: 239 -------------LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMV 285
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG- 247
+A++ MY KCG ++ A+ F +N+VSWN++I+ + G ++A + M G
Sbjct: 286 NNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGE 345
Query: 248 -IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
++ +EVT+ +V+ AC + ++H R + L NA + YAKCG LN
Sbjct: 346 EMKANEVTILNVLPACLDKLQLRSLKELHGYSFR--HCFQHVELSNAFILAYAKCGALNS 403
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A VF + + V S WNALI G+ QNG+
Sbjct: 404 AEKVFHGIGDKTVSS-------------------------------WNALIGGHAQNGDP 432
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+AL L + P +T +LL ACA+L LQ G++ H +V+++GL E+D
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGL------ETDF 486
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
FVG SL+ Y+ CG +F+ M +++ VSWNAMI G +QNG E+L LF+K L
Sbjct: 487 FVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSE 546
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC-MVDLLGRAGCLD 545
G + + ++ V ACS + G++ + K L C ++D+ ++GC+
Sbjct: 547 GIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK--ALQTEDAFVGCSIIDMYAKSGCIK 604
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVH 573
E++ + + + + W +++ A +H
Sbjct: 605 ESRKVFDGLK-DKNVASWNAIIVAHGIH 631
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 245/494 (49%), Gaps = 75/494 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL +C K + RR+H + S + ++ + RLI +YA CG +R VFD M K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N+ WN++VSG+ ++ + + + F+ +
Sbjct: 109 NLI-------------------------------QWNALVSGYTRNGLYGDVVKVFMDLV 137
Query: 144 SE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
S+ +F ++F S + AC G +D ++G +H ++ K DV++G+AL+ MYGKCG V
Sbjct: 138 SDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAV 197
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSA 261
A +VFD M E N+VSWNS+I + +NG + D+ ++ + M+ G+ PD VT+ +++
Sbjct: 198 DEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPV 257
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA G+ IH ++ L ++++ NA+V MY+KCG LNEA+ F + +NVVS
Sbjct: 258 CAGEGEVDIGMGIHGLAVKL-GLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVS 316
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR--LLKRE 379
WN +I+ ++ G+ EA L + ++ E
Sbjct: 317 -------------------------------WNTMISAFSLEGDVNEAFNLLQEMQIQGE 345
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ T N+L AC + L+ ++ H + +H + + + N+ I Y KC
Sbjct: 346 EMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-------LSNAFILAYAKC 398
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ ++F + ++ SWNA+I G AQNG +AL L +M G++PD T+ +L
Sbjct: 399 GALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLL 458
Query: 500 CACSHAGLVEEGRK 513
AC+H ++ G++
Sbjct: 459 LACAHLKSLQYGKE 472
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 196/399 (49%), Gaps = 48/399 (12%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL----SEYSFGSALSACAGSVDFK 168
+ ++ S+ ++ + D + AL ++ HS+N A ++ + G L AC D +
Sbjct: 2 QTNRPSFLQEIAALCETDNLTTAL-ILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIE 60
Query: 169 MGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
G ++H +S S Y +D + + LI MY CG +R VFD M +N++ WN+L++ Y
Sbjct: 61 TGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGY 120
Query: 228 EQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+NG D ++VF+ +++ + +PD T SV+ AC + + G IH +++ L
Sbjct: 121 TRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKM-GLVL 179
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ +GNALV MY KCG ++EA V F M
Sbjct: 180 DVFVGNALVGMYGKCGAVDEAMKV-------------------------------FDFMP 208
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
E N+VSWN++I +++NG + ++ L +L E + P T +L CA ++ +G
Sbjct: 209 ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGM 268
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H VK GL ++ V N+++ MY KCG + + F ++ VSWN MI
Sbjct: 269 GIHGLAVKLGL------SEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMIS 322
Query: 466 GCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIGVLCAC 502
+ G EA L ++M + GE K + VT++ VL AC
Sbjct: 323 AFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 45/323 (13%)
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC + + G ++H + RND VL L+ MYA CG
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCG--------------- 93
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLL 376
S +RL+F M +N++ WNAL++GYT+NG + + +F L+
Sbjct: 94 ----------------SPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLV 137
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
P ++TF +++ AC + D++LG H V+K GL D+FVGN+L+ MY
Sbjct: 138 SDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVL------DVFVGNALVGMY 191
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHV 493
KCG+V++ ++F+ M E + VSWN+MI ++NG+ ++ L +ML GE+ PD V
Sbjct: 192 GKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEML--GEEGLLPDVV 249
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ +L C+ G V+ G ++ + GL+ MV + + G L+EA+
Sbjct: 250 TVVTILPVCAGEGEVDIGMG-IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF-V 307
Query: 554 MPMQPDAVIWGSLLAACKVHRNI 576
+ V W ++++A + ++
Sbjct: 308 KNNNKNVVSWNTMISAFSLEGDV 330
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 353/655 (53%), Gaps = 71/655 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L SC + + R VHA +++ F ++ + N LI +Y KCG + AR
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARM-- 191
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
LF MP RD+ SWN+M+SG+ ++D E L
Sbjct: 192 -----------------------------LFDKMPTRDRISWNAMISGYFENDECLEGLE 222
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S +SAC D ++GTQ+H+ + ++ Y ++ + ++LI MY
Sbjct: 223 LFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYL 282
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
G A VF GM R++VSW ++I+ N ALE + M +G PDEVT+AS
Sbjct: 283 SVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIAS 342
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SACASL G+++H R + +V+ N+L+DMY+KC +
Sbjct: 343 VLSACASLGQLDMGMKLHELAERTGHILY-VVVANSLIDMYSKCKR-------------- 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ A +F ++ +++V+SW ++I G N EAL FR +
Sbjct: 388 -----------------IEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+S P T + L+ACA + L G++ H H +K G+ F D F+ N+++D+Y+
Sbjct: 431 LKSK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGF------DGFLPNAILDLYV 483
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG + F + E+D +WN ++ G AQ G G + LFK+M+ PD VT I
Sbjct: 484 RCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFIS 542
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+LCACS +G+V EG +YF M + + P HY C+VDLLGRAG L+EA IE MP++
Sbjct: 543 LLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIK 602
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD IWG+LL AC++HR+++LGE A+ + + + + G Y+LL N+YA+ G+W EV +VR
Sbjct: 603 PDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVR 662
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+ M++ G++ PGCSW+E+ G V+ F+ D HP +EI +VL+ +MK G+
Sbjct: 663 RTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGF 717
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 219/470 (46%), Gaps = 53/470 (11%)
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGS 190
+AL + M + E F + + C + G V A+LS V +G+
Sbjct: 14 LEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGN 73
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
AL+ M+ + G V A VF M ER++ SWN L+ Y + G +AL ++ R++ +GI P
Sbjct: 74 ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D T SV+ +CA G ++HA ++R + D+ + NAL+ MY KCG + AR +
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFD-FDMDVDVVNALITMYVKCGDVVSARML 192
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FD+MP R+ +S +M+S GY +N E E L
Sbjct: 193 FDKMPTRDRISWNAMIS-------------------------------GYFENDECLEGL 221
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ S+ P T ++++AC L D +LG Q H++VV+ + + +I V N
Sbjct: 222 ELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVR------TAYDGNISVYN 275
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY+ G ++ +F M RD VSW +I GC N +AL +K M + G P
Sbjct: 276 SLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMP 335
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY------TCMVDLLGRAGCL 544
D VT+ VL AC+ G ++ G K H LA H ++D+ + +
Sbjct: 336 DEVTIASVLSACASLGQLDMGMKL-------HELAERTGHILYVVVANSLIDMYSKCKRI 388
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
++A + +P D + W S++ +++ +K++ NS
Sbjct: 389 EKALEIFHQIP-DKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNS 437
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 39/341 (11%)
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
+G AL+ M I +E +++ C + + EG + ++ +
Sbjct: 11 SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
LGNAL+ M+ + G + A VF RM ER+
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMG-------------------------------ERD 99
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
+ SWN L+ GYT+ G +EAL L+ + + P YTF ++L +CA DL GR+ H
Sbjct: 100 LFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHA 159
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
HVV+ + D+ V N+LI MY+KCG V +F+ M RD +SWNAMI G +
Sbjct: 160 HVVRFDF------DMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFE 213
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
N E L LF +M PD +TM V+ AC G G + S + + +
Sbjct: 214 NDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISV 273
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
Y ++ + G EA+++ M + D V W ++++ C
Sbjct: 274 -YNSLIQMYLSVGHWKEAESVFSGMECR-DVVSWTTIISGC 312
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 362/663 (54%), Gaps = 42/663 (6%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F LL +C + + S+ +VH ++K ++F+ N LI YA CG
Sbjct: 121 DNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACG--------- 171
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+D ++F M ER+ SW S+++G++ + EA+
Sbjct: 172 ----------------------KVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 209
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + A+SACA D ++G +V L+++ S+ + +AL+DMY
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYM 269
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + R +FD ++N+V +N++++ Y Q+G A + L V M+ G PD+VT+ S
Sbjct: 270 KCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLS 329
Query: 258 VVSACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++ACA L G HA + R E+L N + NA++DMY KCGK A VFD M
Sbjct: 330 TIAACAQLGDLSVGKSSHAYVFRNGLERLDN---ISNAIIDMYMKCGKREAACKVFDSMS 386
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ VV+ S+++G + ++ A +F +M E N+VSWN +I Q EEA+ L R
Sbjct: 387 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 446
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ + + T + +AC L L L + +T++ K+ + D+ +G +L+DM
Sbjct: 447 MQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHI------DMQLGTALVDM 500
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
+ +CG + R+FE M +RD +W A I A G A+ LF +ML K D
Sbjct: 501 FSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVF 560
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L A SH G V++GR+ F +M K HG++P HY CMVDLLGRAG L+EA L+++MP
Sbjct: 561 VALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMP 620
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++P+ VIWGS LAAC+ H+N+ Y +K+ ++ P G +VLLSN+YA G+W +V R
Sbjct: 621 IKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVAR 680
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VR M+++G K G S IE+ G + F D+ H N +I L+L+ + + +VGYVP+
Sbjct: 681 VRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPD 740
Query: 676 ASD 678
++
Sbjct: 741 TTN 743
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 256/548 (46%), Gaps = 81/548 (14%)
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD--QCSW---NS 121
C L +++ M K VF N +I ++ G + + + E + +CS N+
Sbjct: 32 CKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNT 91
Query: 122 MVSGFAQHDRFSEALGYFVKMH---SENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
++ G+A EA+ F+ +H ++F LSAC+ + F G QVH ++
Sbjct: 92 LIRGYAASGLCKEAI--FIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 149
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K D+++ ++LI Y CG+V R+VFD M ERN+VSW SLI Y A +A+
Sbjct: 150 KMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 209
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M+ G+EP+ VT+ +SACA L + G ++ LM ++++ ++ NAL+DMY
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKV-CNLMTELGVKSNTLVVNALLDMY 268
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
KCG + R +FD ++N+V +N +++
Sbjct: 269 MKCGDMYAVREIFDEFS-------------------------------DKNLVMYNTIMS 297
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Y Q+G E L + + ++ P T + + ACA L DL +G+ +H +V ++GL
Sbjct: 298 NYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLER 357
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG------- 471
L + N++IDMYMKCG E C++F++M + V+WN++I G ++G
Sbjct: 358 LDN------ISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALR 411
Query: 472 -YG-----------------------TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+G EA+ L ++M G K D VTM+G+ AC + G
Sbjct: 412 IFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGA 471
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
++ + ++ + K ++ T +VD+ R G A + E M + D W + +
Sbjct: 472 LDLAKWIYTYIEKNDIHIDMQLG-TALVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAI 529
Query: 568 AACKVHRN 575
V N
Sbjct: 530 RVKAVEGN 537
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/674 (35%), Positives = 358/674 (53%), Gaps = 68/674 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFI-QNRLIDVYAKCGCLYGARKVFDKM 80
+ +LL SC + R+ + +K F S I I N L+ +Y++ G + AR +FD+M
Sbjct: 9 YVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEM 68
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL---- 136
+N F+WN++I G + G + R F MPERD SWN ++SGFA+ S A
Sbjct: 69 PERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRLFD 128
Query: 137 ---------------GYFVKMHSE---------NFALSEYSFGSALSACAGSVDFKMGTQ 172
GY + +SE F+ + + L ACA K G Q
Sbjct: 129 AMPEKDVVTLNSLLHGYILNGYSEEALRLFKELKFSADAITLTTVLKACAELEALKRGKQ 188
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGK-------------------------------CGR 201
+HA + D M S+L+++Y K CGR
Sbjct: 189 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGR 248
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V+ +RR+FD R ++ WNS+I+ Y N +AL +F M E D TLA+V++A
Sbjct: 249 VNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWE-DSRTLAAVINA 307
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + G Q+H + L +D+V+ + L+DMY+KCG EA +F + + +
Sbjct: 308 CIGLGFLETGKQMHCHACKF-GLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 366
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM+ Y + A+ +F ++ ++++SWN++ G++QNG E L F + + +
Sbjct: 367 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDL 426
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ ++++ACA+++ L LG Q GL +SD V +SLID+Y KCGS
Sbjct: 427 PTDEVSLSSVISACASISSLGLGEQVFARATIVGL------DSDQIVSSSLIDLYCKCGS 480
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE+G R+F+TMV+ D V WN+MI G A NG+G EA+ LFKKM + G +P +T + VL A
Sbjct: 481 VENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTA 540
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C++ GLVEEGR F +M +HG P K+H++CMVDLL RAG ++EA L+E MP DA
Sbjct: 541 CNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADAS 600
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W S+L C + +G+ VA+K++E+EP NS YV LS ++A G W VRKLMR
Sbjct: 601 MWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 660
Query: 622 KRGVVKQPGCSWIE 635
+ V K PG SW +
Sbjct: 661 ENNVSKNPGSSWAD 674
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 231/487 (47%), Gaps = 70/487 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +L +C +++ +++HA+I+ + + + L++VYAKCG L A +
Sbjct: 166 DAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 225
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ + + +++I+G G ++++ RLF R WNSM+SG+ ++ EAL
Sbjct: 226 EQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALV 285
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +E + S + + ++AC G + G Q+H K D+ + S L+DMY
Sbjct: 286 LFNEMRNETWEDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYS 344
Query: 198 K-------------------------------CGRVSCARRVFDGMRERNIVSWNSLITC 226
K CGR+ A+RVF+ + ++++SWNS+
Sbjct: 345 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 404
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+ QNG + LE F +M + DEV+L+SV+SACAS+++ G Q+ AR L +
Sbjct: 405 FSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFAR-ATIVGLDS 463
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D ++ ++L+D+Y KCG + R VFD M + V SM+SGYA
Sbjct: 464 DQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYA---------------- 507
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG EA+ LF+ + + PT TF +L AC ++ GR
Sbjct: 508 ---------------TNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGR- 551
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
++ ++ G D + ++D+ + G VE+ + E M + D W++++
Sbjct: 552 ----LLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLR 607
Query: 466 GCAQNGY 472
GC NGY
Sbjct: 608 GCVANGY 614
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 11/370 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A ++++C+ + +++H K +I + + L+D+Y+KCG A K+F
Sbjct: 297 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLF 356
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + + NS+I G IDDA R+F + + SWNSM +GF+Q+ E L
Sbjct: 357 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLE 416
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
YF +MH + E S S +SACA +G QV A + SD + S+LID+Y
Sbjct: 417 YFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYC 476
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V RRVFD M + + V WNS+I+ Y NG +A+++F +M +GI P ++T
Sbjct: 477 KCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMV 536
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC +EG + + D + +VD+ A+ G + EA + + MP
Sbjct: 537 VLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFD 596
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLER-------NVVSWNALIAGYTQNGENEEAL 370
++ SM S + + M K+ E+ N V++ L A + +G+ E +
Sbjct: 597 ---ADASMWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESS- 652
Query: 371 GLFRLLKRES 380
L R L RE+
Sbjct: 653 ALVRKLMREN 662
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 317/522 (60%), Gaps = 39/522 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S ++ACA +HA L+ S+++ V++ ++LI +Y KCG V+ ARRVFDGM
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++ SW SLI Y QN +AL + M+ +P+ T AS++ A + A+ G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IHA ++ + +D+ +G+AL+DMYA+CG+++ A VFD++
Sbjct: 187 IHALTVKYD-WHDDVYVGSALLDMYARCGRMDMAIAVFDQLE------------------ 227
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+N VSWNALIAG+ + G+ E L +F ++R TH+T+ ++ +
Sbjct: 228 -------------SKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFS 274
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A A + L+ G+ H H++K SGE FVGN+++DMY K GS+ D ++F+ +
Sbjct: 275 AIAGIGALEQGKWVHAHMIK------SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++D V+WN+M+ AQ G G EA+ F++M CG + +T + +L ACSH GLV+EG++
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M KE+ L P DHY +VDLLGRAG L++A I MPM+P A +WG+LL +C++H
Sbjct: 389 YFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N +G++ A + E++P ++GP VLL N+YA G+W RVRK+M+ GV K+P CSW
Sbjct: 448 KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSW 507
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+EI V++F+ D HP ++EIY + ++ ++++ GYVPN
Sbjct: 508 VEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPN 549
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 72/454 (15%)
Query: 17 LDSSP--FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L ++P + L+ +C R +S+ D R +HA + SQFA +F+ N LI +Y KCG
Sbjct: 60 LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGA----- 114
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+ DA R+F MP RD CSW S+++G+AQ+D E
Sbjct: 115 --------------------------VADARRVFDGMPARDMCSWTSLIAGYAQNDMPDE 148
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
ALG M F + ++F S L A S +G Q+HAL K + DVY+GSAL+D
Sbjct: 149 ALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLD 208
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY +CGR+ A VFD + +N VSWN+LI + + G L +F M +G E T
Sbjct: 209 MYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFT 268
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+SV SA A + A ++G +HA +++ + R +GN ++DMYAK G + +AR VFDR+
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGE-RLSAFVGNTILDMYAKSGSMIDARKVFDRV 327
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
++VV+ WN+++ + Q G EA+ F
Sbjct: 328 DKKDVVT-------------------------------WNSMLTAFAQYGLGREAVTHFE 356
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+++ V TF ++L AC++ ++ G+Q + ++ L E D +V +++D
Sbjct: 357 EMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE----PEIDHYV--TVVD 410
Query: 435 MYMKCGSVEDG-CRIFETMVERDWVSWNAMIVGC 467
+ + G + D IF+ ++ W A++ C
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/672 (34%), Positives = 356/672 (52%), Gaps = 72/672 (10%)
Query: 8 KQIVGDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+ +VG+ +F+ D + +L C + + VH +K E+ + N LID+Y+K
Sbjct: 192 EMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSK 251
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
C F+ +A LF +++ SWNSM+ G+
Sbjct: 252 CR-------------------------------FLSEAQLLFDKNDKKNIVSWNSMIGGY 280
Query: 127 AQHDRFSEALGYFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
A+ + KM +E+ + E++ + L C + + ++H + S
Sbjct: 281 AREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQS 340
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+ + +A I Y +CG + + RVFD M + + SWN+L+ Y QN AL+++++M
Sbjct: 341 NELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT 400
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
SG++PD T+ S++ AC+ + + G +IH +R L D +G +L+ +Y CGK
Sbjct: 401 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALR-NGLAVDPFIGISLLSLYICCGKP 459
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
A+ +FD M R++VSWN +IAGY+QNG
Sbjct: 460 FAAQVLFDGME-------------------------------HRSLVSWNVMIAGYSQNG 488
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EA+ LFR + + + P + AC+ L+ L+LG++ H +K L
Sbjct: 489 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT------E 542
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
DIFV +S+IDMY K G + RIF+ + E+D SWN +I G +G G EAL LF+KML
Sbjct: 543 DIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKML 602
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G KPD T G+L ACSHAGLVE+G +YF+ M H + P +HYTC+VD+LGRAG +
Sbjct: 603 RLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRI 662
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
D+A LIE MP PD+ IW SLL++C++H N+ LGE VA KLLE+EP YVL+SN++
Sbjct: 663 DDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLF 722
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A G+W +V RVR M+ G+ K GCSWIE+ G V+ F++ D+ P +E+ + L
Sbjct: 723 AGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLE 782
Query: 665 REMKRVGYVPNA 676
++ +GY P+
Sbjct: 783 VKISSIGYTPDT 794
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 240/485 (49%), Gaps = 75/485 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL +C + K + RR+H + S QF ++ + R+I +Y+ CG +R VFDK+ K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N+F WN++VS + +++ F +A+ F ++
Sbjct: 64 NLF-------------------------------QWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 144 S-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
S ++ + ACAG +D +G +H + +K SDV++G+ALI MYGKCG V
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLV 152
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA--SGIEPDEVTLASVVS 260
A +VF+ M ERN+VSWNS+I + +NG ++ F M+ PD TL +V+
Sbjct: 153 EEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
CA ++G+ +H ++ L +L++ N+L+DMY+KC L+EA+
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKL-GLNEELMVNNSLIDMYSKCRFLSEAQ------------ 259
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
L+F K ++N+VSWN++I GY + + L + ++ E
Sbjct: 260 -------------------LLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300
Query: 381 --VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ +T N+L C ++LQ ++ H + +HGL +S+ V N+ I Y +
Sbjct: 301 AKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGL------QSNELVANAFIAAYTR 354
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG++ R+F+ M + SWNA++ G AQN +AL L+ +M G PD T+ +
Sbjct: 355 CGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 499 LCACS 503
L ACS
Sbjct: 415 LLACS 419
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 198/419 (47%), Gaps = 46/419 (10%)
Query: 155 GSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
G L AC D ++G ++H ++S S ++ +D + + +I MY CG S +R VFD +R
Sbjct: 2 GVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR 61
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGL 272
+N+ WN++++ Y +N DA+ +F +++ + +PD TL V+ ACA L G
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
IH + + L +D+ +GNAL+ MY KCG + EA VF+ MP RN+VS S
Sbjct: 122 IIHGMATKMD-LVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNS-------- 172
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR--LLKRESVCPTHYTFGN 390
+I G+++NG +E+ FR L+ ES P T
Sbjct: 173 -----------------------IICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L CA D++ G H VK GL ++ V NSLIDMY KC + + +F+
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLN------EELMVNNSLIDMYSKCRFLSEAQLLFD 263
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLV 508
+++ VSWN+MI G A+ L +KM K D T++ VL C +
Sbjct: 264 KNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSEL 323
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ K S HGL + + R G L ++ + + M + + W +LL
Sbjct: 324 QS-LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSS-WNALL 380
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 161/335 (48%), Gaps = 42/335 (12%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ ++ AC + G ++H + + ND VL ++ MY+ CG
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCG------------ 48
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF- 373
S +R++F K+ +N+ WNA+++ YT+N E+A+ +F
Sbjct: 49 -------------------SPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
L+ P ++T ++ ACA L DL LG+ H K L SD+FVGN+LI
Sbjct: 90 ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLV------SDVFVGNALI 143
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK--PD 491
MY KCG VE+ ++FE M ER+ VSWN++I G ++NG+ E+ F++ML+ E PD
Sbjct: 144 AMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPD 203
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
T++ VL C+ +E+G ++ + GL ++D+ + L EA+ L
Sbjct: 204 VATLVTVLPVCAGEEDIEKGMA-VHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+ + + V W S++ ++ Y+ +K+
Sbjct: 263 DKND-KKNIVSWNSMIGGYAREEDVCRTFYLLQKM 296
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/593 (38%), Positives = 334/593 (56%), Gaps = 42/593 (7%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS-ENF 147
NS++ +K G + A LF +MP R+ SWN +++G+ E L F M S +N
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+EY F +ALSAC+ K G Q H LL K Y+ SAL+ MY +C V A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 208 VFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
V D G +I S+NS++ ++G +A+EV RM+ + D VT V+ CA
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ + GL++HARL+R + ++ V G+ L+DMY KCG+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFV-GSMLIDMYGKCGE--------------------- 271
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
V +AR +F + RNVV W AL+ Y QNG EE+L LF + RE P
Sbjct: 272 ----------VLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPN 321
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
YTF LLNACA +A L+ G H V K G + + + V N+LI+MY K GS++
Sbjct: 322 EYTFAVLLNACAGIAALRHGDLLHARVEKLGFK------NHVIVRNALINMYSKSGSIDS 375
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F M+ RD ++WNAMI G + +G G +AL +F+ M+ E P++VT IGVL A SH
Sbjct: 376 SYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSH 435
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV+EG Y + + + + P +HYTCMV LL RAG LDEA+ ++ ++ D V W
Sbjct: 436 LGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWR 495
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL AC VHRN LG +A+ +L+++P + G Y LLSNMYA+ RW VV +RKLMR+R
Sbjct: 496 TLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERN 555
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ K+PG SW++I ++VF+ + HP + +IY ++ L +K +GYVPN +
Sbjct: 556 IKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIA 608
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 200/420 (47%), Gaps = 47/420 (11%)
Query: 161 CAGSVDFKMGTQVHA-LLSKSRYSSDVYMG--SALIDMYGKCGRVSCARRVFDGMRERNI 217
CA G +HA L +++ S+ ++ ++L+ +Y KCG++ AR +FD M RN+
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
VSWN L+ Y G + L +F M++ P+E + +SAC+ KEG+Q H
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
L + + + V +ALV MY++C + A V D +P +V
Sbjct: 142 LLFKFGLVCHQYV-KSALVHMYSRCSHVELALQVLDTVPGEHV----------------- 183
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
++ S+N+++ ++G EEA+ + R + E V H T+ ++ CA
Sbjct: 184 -----------NDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCA 232
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ DLQLG + H +++ GL F D FVG+ LIDMY KCG V + +F+ + R+
Sbjct: 233 QIRDLQLGLRVHARLLRGGLMF------DEFVGSMLIDMYGKCGEVLNARNVFDGLQNRN 286
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
V W A++ QNGY E+L LF M G P+ T +L AC+ + G +
Sbjct: 287 VVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHA 346
Query: 517 SMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ K K+H ++++ ++G +D + + M + D + W +++ H
Sbjct: 347 RVEK----LGFKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHH 401
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 147/301 (48%), Gaps = 31/301 (10%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
++++V + D + ++ C + + + RVHAR+++ + F+ + LID+Y K
Sbjct: 209 LRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGK 268
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG + AR VFD + N+NV W ++++ +
Sbjct: 269 CGEVLNARNVFDGLQNRNVVV-------------------------------WTALMTAY 297
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
Q+ F E+L F M E +EY+F L+ACAG + G +HA + K + + V
Sbjct: 298 LQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHV 357
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ +ALI+MY K G + + VF M R+I++WN++I Y +G AL+VF M+++
Sbjct: 358 IVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSA 417
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
P+ VT V+SA + L KEG LMR K+ L +V + ++ G L+E
Sbjct: 418 EECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDE 477
Query: 307 A 307
A
Sbjct: 478 A 478
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 45/326 (13%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG--NALVDMYAKCGKLNEA 307
P L ++ CA + G +HA+ + + N + N+LV +Y KCG+L A
Sbjct: 10 PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +FD MP+RNVVS WN L+AGY G +
Sbjct: 70 RNLFDAMPLRNVVS-------------------------------WNVLMAGYLHGGNHL 98
Query: 368 EALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
E L LF+ ++ ++ CP Y F L+AC++ ++ G Q HGL F G
Sbjct: 99 EVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQC------HGLLFKFGLVCHQ 152
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVER---DWVSWNAMIVGCAQNGYGTEALGLFKKM 483
+V ++L+ MY +C VE ++ +T+ D S+N+++ ++G G EA+ + ++M
Sbjct: 153 YVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRM 212
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
+ DHVT +GV+ C+ ++ G + + + + GL + + ++D+ G+ G
Sbjct: 213 VDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRG-GLMFDEFVGSMLIDMYGKCGE 271
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ A+ + + + + + V+W +L+ A
Sbjct: 272 VLNARNVFDGLQNR-NVVVWTALMTA 296
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL++C ++ +HAR+ K F + + ++N LI++Y+K G + + VF M
Sbjct: 325 FAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMI 384
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC----SWNSMVSGFAQHDRFSEALG 137
+++ TWN++I G G A ++F M ++C ++ ++S ++ E
Sbjct: 385 YRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGF- 443
Query: 138 YFVKMHSENF----ALSEYSFGSALSACAGSVD----FKMGTQV-------HALLSKSRY 182
Y++ NF L Y+ AL + AG +D F TQV LL+
Sbjct: 444 YYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHV 503
Query: 183 SSDVYMG------------------SALIDMYGKCGRVSCARRVFDGMRERNI 217
+ +G + L +MY K R + MRERNI
Sbjct: 504 HRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNI 556
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/625 (35%), Positives = 353/625 (56%), Gaps = 41/625 (6%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+ ++ + +C + +++ ++ ++ NS + + AS F+++ +
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPT 90
Query: 116 QCSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
+ S+N M+ G + ++ S AL ++ +M + ++ AC+ + + G H
Sbjct: 91 EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ + D ++ +LI MY +CG++ AR+VFD + ++++VSWNS+I+ Y + A
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+A+ +F MM +G +P+E++L SV+ AC L K G + ++ K+ + +G+AL
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE-NKMTLNYFMGSAL 269
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ MY KCG L SAR +F M +++ V+WN
Sbjct: 270 IHMYGKCGDL-------------------------------VSARRIFDSMKKKDKVTWN 298
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I GY QNG +EEA+ LF+ ++ S P T +L+ACA++ L LG+Q + +
Sbjct: 299 AMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER 358
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G + D++VG +L+DMY KCGS+++ R+F M +++ VSWNAMI A +G
Sbjct: 359 GF------QDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQ 412
Query: 475 EALGLFKKMLLCGE--KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EAL LFK M+ G P+ +T +GVL AC HAGLV+EGR+ F MS GL P +HY+
Sbjct: 413 EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYS 472
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDL RAG L+EA + MP +PD VI G+LL AC+ +NI + E V K LLE+EPS
Sbjct: 473 CMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPS 532
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
NSG YV+ S +YA L RW + R+R LM+++GV K PGCSWI+I ++ F D H
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQE 592
Query: 653 NKEIYLVLKMLTREMKRVGYVPNAS 677
EI+ +L +L +++R GY+PNA+
Sbjct: 593 WIEIHQILDLLIDDLRREGYIPNAN 617
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 170/386 (44%), Gaps = 61/386 (15%)
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
N L + + +C + + + + ++ ++ S + A A + F+ +
Sbjct: 27 NRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNI 86
Query: 346 LERNVVSWNALIAGY-TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
L+ S+N +I G T ++ AL + +K + P + T+ L AC+NL ++ G
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R H V++ GL + D V +SLI MY +CG + D ++F+ + ++D VSWN+MI
Sbjct: 147 RMGHCSVIRRGL------DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG------LVEE-------- 510
G ++ + EA+GLF++M+ G +P+ ++++ VL AC G VEE
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMT 260
Query: 511 ---------------------GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
R+ F SM K+ K + M+ + G +EA
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD-----KVTWNAMITGYAQNGMSEEAIK 315
Query: 550 LIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG----PYV--LL 600
L + M M PD + +L+AC + LG+ V EI S G YV L
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV-----EIYASERGFQDDVYVGTAL 370
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVV 626
+MYA+ G RV M K+ V
Sbjct: 371 VDMYAKCGSLDNAFRVFYGMPKKNEV 396
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/568 (38%), Positives = 336/568 (59%), Gaps = 12/568 (2%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F + + +N MV +A+ + L F ++ + +++ L A
Sbjct: 196 AEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 255
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D + G +V + K+ D Y+ ++LIDMY + V A+++FD M R+ VSWN +
Sbjct: 256 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 315
Query: 224 ITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
I+ Y + DA+ F M G E PDE T+ S +SAC +L + G +IH + +
Sbjct: 316 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-- 373
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+L + NAL+DMYAKCG LN AR +FD M ++NV+ TSM+SGY ++ AR +F
Sbjct: 374 ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLF 433
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
K R+VV W A+I GY Q ++A+ LFR ++ + V P +T LL CA L L+
Sbjct: 434 DKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALE 493
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
G+ H ++ ++ + D+ VG +LI+MY KCG V+ IF + ++D SW +
Sbjct: 494 QGKWIHGYLDENRITM------DVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTS 547
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
+I G A NG +EAL LF +M G KPD +T IGVL ACSH GLVEEGR++F+SM K H
Sbjct: 548 IICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVH 607
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI---WGSLLAACKVHRNIMLG 579
+ P +HY C++DLLGRAG LDEA+ LI+ +P++ ++ +G+LL+AC++H N+ +G
Sbjct: 608 RIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMG 667
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E +AKKL IE +S + LL+N+YA + RW + +VR+ M++ GV K PGCS IE+ G
Sbjct: 668 ERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGI 727
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREM 667
V+ F+V D HP EI +L +T ++
Sbjct: 728 VHEFLVGDPSHPEMMEICSMLNRVTGQL 755
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 159/301 (52%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L +C K++ +H ++ + I N L+D+YAKCGCL AR +F
Sbjct: 344 DEATVVSTLSACTALKNLELGDEIH-NYVRKELGFTTRIDNALLDMYAKCGCLNIARNIF 402
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+MS KNV W S+I+G + G + +A LF P RD W +M++G+ Q F +A+
Sbjct: 403 DEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVA 462
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++ + L+ CA + G +H L ++R + DV +G+ALI+MY
Sbjct: 463 LFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYS 522
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V + +F + +++ SW S+I NG S+AL +F M G +PD++T
Sbjct: 523 KCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIG 582
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ +EG + + + ++ + ++D+ + G L+EA + +PI
Sbjct: 583 VLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIE 642
Query: 318 N 318
N
Sbjct: 643 N 643
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 186/418 (44%), Gaps = 98/418 (23%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF CLR V +V I+K+ + ++ N LID+Y + + A+K+FD+M
Sbjct: 247 PFVLKAIGCLRD--VRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM 304
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ ++ +WN +I SG+ + RF +A+ F
Sbjct: 305 TTRDSVSWNVMI-------------------------------SGYVRCRRFEDAINTFR 333
Query: 141 KMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M E N E + S LSAC + ++G ++H + K + +AL+DMY KC
Sbjct: 334 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKC 392
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PA-------------- 233
G ++ AR +FD M +N++ W S+I+ Y G P
Sbjct: 393 GCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYV 452
Query: 234 -----SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F M ++PD+ T+ ++++ CA L A ++G IH L ++ D+
Sbjct: 453 QFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDV 511
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
V+G AL++MY+KCG ++++ +F + ++ S TS++ G A
Sbjct: 512 VVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA------------------ 553
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG+ EAL LF ++R P TF +L+AC++ ++ GR+
Sbjct: 554 -------------MNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRR 598
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+ +++ + +++ A +F + + ++ +N ++ Y + G + L LF+ L
Sbjct: 175 RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQL 234
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + + P +T+ +L A L D++ G + +VK G+ + D +V NSLIDMY
Sbjct: 235 REDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGM------DLDNYVYNSLIDMY 288
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVTM 495
+ +VE+ ++F+ M RD VSWN MI G + +A+ F++M G EKPD T+
Sbjct: 289 YELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATV 348
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ L AC+ +E G + + + KE G D+ ++D+ + GCL+ A+ + + M
Sbjct: 349 VSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMS 406
Query: 556 MQPDAVIWGSLLAA 569
M+ + + W S+++
Sbjct: 407 MK-NVICWTSMISG 419
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 347/639 (54%), Gaps = 69/639 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C ++ +H +KS +F+ + LID+Y K G + +VF+KM +NV
Sbjct: 131 LKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNV 190
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+W +II GL+ G+ E L YF +M
Sbjct: 191 VSWTAIIAGLVHAGY-------------------------------NMEGLLYFSEMWRS 219
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
++F AL A A S G +H K + ++ + L MY KCG+
Sbjct: 220 KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYV 279
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+F+ MR ++VSW +LI+ Y Q G A+E F RM S + P++ T A+V+S+CA+L
Sbjct: 280 MRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANL 339
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
AA K G QIH ++R L N L + N+++ +Y+KCG L A VF + ++++S
Sbjct: 340 AAAKWGEQIHGHVLRL-GLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIIS---- 394
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
W+ +I+ Y+Q G +EA ++RE P
Sbjct: 395 ---------------------------WSTIISVYSQGGYAKEAFDYLSWMRREGPKPNE 427
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+ ++L+ C ++A L+ G+Q H H++ G+ + + V +++I MY KCGSV++
Sbjct: 428 FALSSVLSVCGSMALLEQGKQVHAHLLCIGI------DHEAMVHSAIISMYSKCGSVQEA 481
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+IF M D +SW AMI G A++GY EA+ LF+K+ G KPD+V IGVL AC+HA
Sbjct: 482 SKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHA 541
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G+V+ G YF M+ + ++P K+HY C++DLL RAG L EA+ +I +MP D V+W +
Sbjct: 542 GMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWST 601
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC+VH ++ G + A++LL+++P+++G ++ L+N+YA GRW E +RKLM+ +GV
Sbjct: 602 LLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGV 661
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
+K+ G SW+ + +N F+ D+ HP ++ I VLK+L+
Sbjct: 662 IKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLS 700
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 228/498 (45%), Gaps = 49/498 (9%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S N+ NS + L+K G + A +F M RD+ SW ++++G+ EAL F
Sbjct: 53 SVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 112
Query: 141 KMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M ++ AL ACA V+ G +H KS V++ SALIDMY K
Sbjct: 113 NMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKV 172
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G++ RVF+ M RN+VSW ++I G + L F M S + D T A +
Sbjct: 173 GKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIAL 232
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A A + G IH + ++ + V+ N L MY KCGK + +F++M + +V
Sbjct: 233 KASADSSLLHHGKAIHTQTIKQGFDESSFVI-NTLATMYNKCGKPDYVMRLFEKMRMPDV 291
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS T+ LI+ Y Q GE E A+ F+ +++
Sbjct: 292 VSWTT-------------------------------LISTYVQMGEEEHAVEAFKRMRKS 320
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P YTF ++++CANLA + G Q H HV++ GL + + V NS+I +Y KC
Sbjct: 321 YVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLV------NALSVANSIITLYSKC 374
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ +F + +D +SW+ +I +Q GY EA M G KP+ + VL
Sbjct: 375 GLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 434
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDH----YTCMVDLLGRAGCLDEAKTLIEAMP 555
C L+E+G++ + H L DH ++ ++ + + G + EA + M
Sbjct: 435 SVCGSMALLEQGKQVHA-----HLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489
Query: 556 MQPDAVIWGSLLAACKVH 573
+ D + W +++ H
Sbjct: 490 IN-DIISWTAMINGYAEH 506
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 211/455 (46%), Gaps = 69/455 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA L + S + + +H + IK F F+ N L +Y KCG ++F
Sbjct: 224 DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLF 283
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM +V +W ++I S + Q A+
Sbjct: 284 EKMRMPDVVSWTTLI-------------------------------STYVQMGEEEHAVE 312
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + ++Y+F + +S+CA K G Q+H + + + + + +++I +Y
Sbjct: 313 AFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYS 372
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A VF G+ ++I+SW+++I+ Y Q G A +A + M G +P+E L+S
Sbjct: 373 KCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 432
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C S+A ++G Q+HA L+ C + ++ ++ +A++ MY+KCG + EA +F+ M I
Sbjct: 433 VLSVCGSMALLEQGKQVHAHLL-CIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN 491
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++S T+M++GYA ++G ++EA+ LF +
Sbjct: 492 DIISWTAMINGYA-------------------------------EHGYSQEAINLFEKIS 520
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P + F +L AC + + LG + ++ + R +E LID+
Sbjct: 521 SVGLKPDYVMFIGVLTACNHAGMVDLGFY-YFMLMTNVYRISPSKEHY----GCLIDLLC 575
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G + + I +M D V W+ ++ C +G
Sbjct: 576 RAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHG 610
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/744 (34%), Positives = 384/744 (51%), Gaps = 117/744 (15%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKL---------LDSCLRSKSVSDTRRVHARIIKSQFA 51
+A+ S Q+ L+F D SP KL L +C K++ +++H++IIK+
Sbjct: 4 LASPVSTLQV---LSFSDPSPPYKLVHDHPSLTLLSNC---KTLQTLKQIHSQIIKTGLH 57
Query: 52 SEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
+ F ++LI+ A + G + A LF ++
Sbjct: 58 NTHFALSKLIEFCA-----------------------------VSPHGDLSYALSLFKTI 88
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
+ WN M+ G + + AL Y+V M S +EY+F S +C G
Sbjct: 89 RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD--GMRE--------------- 214
QVHA + K + ++ ++LI+MY + G + AR VFD MR+
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 215 --------------RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
R++VSWN++I+ Y Q+G +A+ F M + + P+ T+ SV+S
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 261 ACA-SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA S ++ + G + + + L +++ L N L+DMY KCG L EA +F+
Sbjct: 269 ACAQSGSSLQLGNWVRS-WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE------- 320
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
K+ ++NVVSWN +I GYT +EALGLFR + +
Sbjct: 321 ------------------------KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS 356
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ P TF ++L ACANL L LG+ H +V K+ + ++ + + SLIDMY KC
Sbjct: 357 NIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN----MKSMKNTVALWTSLIDMYAKC 412
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + RIF+ M + +WNAMI G A +G+ ALGLF +M G PD +T +GVL
Sbjct: 413 GDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVL 472
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC HAGL+ GR+YFSSM +++ ++P HY CM+DL GRAG DEA+TL++ M M+PD
Sbjct: 473 TACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPD 532
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
IW SLL AC++HR I L E VAK L E+EP N YVLLSN+YA GRW +V ++R
Sbjct: 533 GAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTR 592
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD- 678
+ + K PGCS IE+ V+ F+V DK HP + EIY +L + +++ G+VP+ S+
Sbjct: 593 LNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEV 652
Query: 679 ----DEAYEEQNGSNSTSDCQIDF 698
DE ++E S+ + I F
Sbjct: 653 LYDMDEEWKEGVLSHHSEKLAIAF 676
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/662 (34%), Positives = 365/662 (55%), Gaps = 52/662 (7%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY--G 72
+F+ +P LL+ C K + +++ A++I + + F +RLI A Y
Sbjct: 49 SFVLHNPLLSLLEKC---KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDY 105
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
+ K+ + N N+F SWN + GF++ +
Sbjct: 106 SVKILKGIENPNIF-------------------------------SWNVTIRGFSESENP 134
Query: 133 SEALGYFVKMHSENFALS---EYSFGSALSACAGSVDFKMGTQVHALLS---KSRYSSDV 186
E+ + +M S +++ CA D ++ + H +L K R
Sbjct: 135 KESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA---DLRLSSLGHMILGHVLKLRLELVS 191
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ +A I M+ CG + AR+VFD R++VSWN LI Y++ G A A+ V+ M +
Sbjct: 192 HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESE 251
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++PD+VT+ +VS+C+ L G + + ++ LR + L NAL+DM++KCG ++E
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFY-EYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR +FD + R +VS T+M+SGYA+ + +R +F M E++VV WNA+I G Q
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
++AL LF+ ++ + P T + L+AC+ L L +G H ++ K+ L ++
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL------NV 424
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+G SL+DMY KCG++ + +F + R+ +++ A+I G A +G + A+ F +M+
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G PD +T IG+L AC H G+++ GR YFS M L P HY+ MVDLLGRAG L+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A L+E+MPM+ DA +WG+LL C++H N+ LGE AKKLLE++PS+SG YVLL MY E
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
W + R R++M +RGV K PGCS IE+ G V F+V+DK P +++IY L L R
Sbjct: 605 ANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRH 664
Query: 667 MK 668
M+
Sbjct: 665 MR 666
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 348/637 (54%), Gaps = 48/637 (7%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAK-CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+H + K+ F ++ + +++ Y K L A K F+ M+ +N +TW++II L + G
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
IDDA ++ P + S SM++G A++ R +A F ++H N
Sbjct: 305 RIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPN------------- 351
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
V +A+I Y + V A +F+ M RN +S
Sbjct: 352 --------------------------VVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTIS 385
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W +I Y +NG + AL + G+ P +L S AC+++ A + G Q+H+ +
Sbjct: 386 WAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAV 445
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ N V NAL+ +Y K + R +FDRM +++ VS S +S + + AR
Sbjct: 446 KAGCQFNSYVC-NALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEAR 504
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F M +VVSW +I+ Q + EA+ +FR + E P LL NL
Sbjct: 505 DVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLG 564
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
QLG+Q HT +K G+ +S + V N+L+ MY KC S D ++F++M ERD +
Sbjct: 565 APQLGQQIHTIAIKLGM------DSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFT 617
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WN +I G AQ+G G EA+ +++ M+ G P+ VT +G+L ACSH+GLV+EG ++F SMS
Sbjct: 618 WNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMS 677
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
++GL PL +HY CMVDLLGRAG + A+ I MP++PD+VIW +LL ACK+H+N+ +G
Sbjct: 678 SDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIG 737
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
A+KL IEPSN+G YV+LSN+Y+ G W EV +VRKLM++RGV K PGCSW++I
Sbjct: 738 RRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNK 797
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
++ F+ D+ H + IY L L +K GYVP+
Sbjct: 798 MHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDT 834
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 245/520 (47%), Gaps = 56/520 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL R+ V D RRV N ++ Y + G + ARK+FD M +++
Sbjct: 101 LLSGYARAGRVRDARRV----FDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRD 156
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WN+++TG +++A LF MPER+ SW M+SG+ ++ A F M
Sbjct: 157 VSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLC 216
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK-CGRVS 203
E + + S LSA + +H L+ K+ + DV +G+A+++ Y K +
Sbjct: 217 EGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLD 276
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A + F+GM RN +W+++I Q G DA V+ R +P L SV S +
Sbjct: 277 SAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR------DP----LKSVPSRTS 326
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L A+ G++++A+ +FD++ NVVS
Sbjct: 327 MLTGL------------------------------ARYGRIDDAKILFDQIHEPNVVSWN 356
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M++GY + V A +F +M RN +SW +IAGY +NG +E+AL + L R+ + P
Sbjct: 357 AMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLP 416
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+ + + AC+N+ L+ G+Q H+ VK G +F S +V N+LI +Y K S+
Sbjct: 417 SLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNS------YVCNALITLYGKYRSIG 470
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+IF+ M +D VS+N+ + QN EA +F M PD V+ ++ AC+
Sbjct: 471 SVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM----PSPDVVSWTTIISACA 526
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
A E + F SM E L P T ++ L G G
Sbjct: 527 QADQGNEAVEIFRSMLHEREL-PNPPILTILLGLSGNLGA 565
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 152/290 (52%), Gaps = 3/290 (1%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C +++ ++VH+ +K+ ++ N LI +Y K + R++FD+M+ K+ +
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
+NS ++ L++ D+A +F +MP D SW +++S AQ D+ +EA+ F M E
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHER- 545
Query: 148 ALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
L + L +G++ ++G Q+H + K S + + +AL+ MY KC +
Sbjct: 546 ELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SL 604
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
+VFD M ER+I +WN++IT Y Q+G +A+ ++ M+++G+ P+EVT ++ AC+
Sbjct: 605 KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSG 664
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
EG Q + L L +VD+ + G + A MPI
Sbjct: 665 LVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPI 714
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 184/382 (48%), Gaps = 28/382 (7%)
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
SA I G+ GR+ AR VFD M R+I++WNS+I Y NG R +A I
Sbjct: 37 SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG-----RSLADAIS 91
Query: 250 PDEVTLASVV-SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ +++ S A ++ R+ +RN V NA+V Y + G + AR
Sbjct: 92 GGNLRTGTILLSGYARAGRVRDA----RRVFDGMGVRN-TVAWNAMVTCYVQNGDITLAR 146
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD MP R+V S +M++GY + ++ AR +F +M ERN VSW +I+GY ++
Sbjct: 147 KLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR 206
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A +FR + E + P ++L+A +L + G HV+ H +G E D+ V
Sbjct: 207 AWDMFRTMLCEGMTPEQPNLVSVLSAVRHLG--KPGILESIHVLVHK----TGFERDVVV 260
Query: 429 GNSLIDMYMK-CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
G ++++ Y K ++ + FE M R+ +W+ +I +Q G +A ++++ L
Sbjct: 261 GTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPL-K 319
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
P +M L + G +++ + F + + + ++ + M+ + +DEA
Sbjct: 320 SVPSRTSM---LTGLARYGRIDDAKILFDQIHEPNVVS-----WNAMITGYMQNEMVDEA 371
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
+ L MP + + + W ++A
Sbjct: 372 EDLFNRMPFR-NTISWAGMIAG 392
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 215/541 (39%), Gaps = 117/541 (21%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I L + G + +A +F SMP RD +WNSM+ FA
Sbjct: 40 IRELGRLGRLHEAREVFDSMPFRDIIAWNSMI-----------------------FAYCN 76
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
A + A ++ ++ G+ L+ Y + GRV ARRVFDG
Sbjct: 77 NGMPDAGRSLADAIS----------------GGNLRTGTILLSGYARAGRVRDARRVFDG 120
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI----------------------- 248
M RN V+WN+++TCY QNG + A ++F M + +
Sbjct: 121 MGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLF 180
Query: 249 ----EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL---RNDLVLGNALVDMYAKC 301
E + V+ ++S + + R M CE + + +LV + V K
Sbjct: 181 ERMPERNGVSWTVMISGYVLIEQHGRAWDMF-RTMLCEGMTPEQPNLVSVLSAVRHLGKP 239
Query: 302 GKLNEARCVFDRMPI-RNVVSETSMVSGYAK-ASSVKSARLMFTKMLERNVVSWNALIAG 359
G L + + R+VV T++++GY K + + SA F M RN +W+ +IA
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAA 299
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+Q G ++A +++ +SV P+ + L + D + + F
Sbjct: 300 LSQAGRIDDAFAVYQRDPLKSV-PSRTSMLTGLARYGRIDDAK-------------ILFD 345
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
E ++ N++I YM+ V++ +F M R+ +SW MI G A+NG +AL
Sbjct: 346 QIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVS 405
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS----------------------- 516
+ + G P ++ ACS+ +E G++ S
Sbjct: 406 LQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGK 465
Query: 517 -----SMSKEHGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S+ + +KD Y + L + DEA+ + MP PD V W ++++A
Sbjct: 466 YRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISA 524
Query: 570 C 570
C
Sbjct: 525 C 525
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 63/257 (24%)
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
++++ + + + AR +F M R++++WN++I Y NG
Sbjct: 35 AQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNG---------------- 78
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ +A +LAD +SG ++ G L+ Y + G
Sbjct: 79 ----------MPDAGRSLADA-----------------ISG--GNLRTGTILLSGYARAG 109
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
V D R+F+ M R+ V+WNAM+ QNG T A LF M D + +L
Sbjct: 110 RVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM----PSRDVSSWNTMLT 165
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD---LLGRAG-CLDEAKTLI-EAM- 554
H+ L+EE R F M + +G++ +T M+ L+ + G D +T++ E M
Sbjct: 166 GYCHSQLMEEARNLFERMPERNGVS-----WTVMISGYVLIEQHGRAWDMFRTMLCEGMT 220
Query: 555 PMQPDAVIWGSLLAACK 571
P QP+ V S+L+A +
Sbjct: 221 PEQPNLV---SVLSAVR 234
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 336/568 (59%), Gaps = 12/568 (2%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F + + +N MV +A+ + L F ++ + +++ L A
Sbjct: 150 AEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 209
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D + G +V + K+ D Y+ ++LIDMY + V A+++FD M R+ VSWN +
Sbjct: 210 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 269
Query: 224 ITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
I+ Y + DA+ F M G E PDE T+ S +SAC +L + G +IH + +
Sbjct: 270 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-- 327
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+L + NAL+DMYAKCG LN AR +FD M ++NV+ TSM+SGY ++ AR +F
Sbjct: 328 ELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLF 387
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
K R+VV W A+I GY Q ++A+ LFR ++ + + P +T LL CA L L+
Sbjct: 388 DKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALE 447
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
G+ H ++ ++ + D+ VG +LI+MY KCG V+ IF + ++D SW +
Sbjct: 448 QGKWIHGYLDENRITM------DVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTS 501
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
+I G A NG +EAL LF +M G KPD +T IGVL ACSH GLVEEGR++F+SM K H
Sbjct: 502 IICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVH 561
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI---WGSLLAACKVHRNIMLG 579
+ P +HY C++DLLGRAG LDEA+ LI+ +P++ ++ +G+LL+AC++H N+ +G
Sbjct: 562 RIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMG 621
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E +AKKL IE +S + LL+N+YA + RW + +VR+ M++ GV K PGCS IE+ G
Sbjct: 622 ERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGI 681
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREM 667
V+ F+V D HP EI +L +T ++
Sbjct: 682 VHEFLVGDPSHPEMIEICSMLNRVTGQL 709
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 159/301 (52%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L +C K++ +H ++ + I N L+D+YAKCGCL AR +F
Sbjct: 298 DEATVVSTLSACTALKNLELGDEIH-NYVRKELGFTTRIDNALLDMYAKCGCLNIARNIF 356
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+MS KNV W S+I+G + G + +A LF P RD W +M++G+ Q F +A+
Sbjct: 357 DEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVA 416
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +++ + L+ CA + G +H L ++R + DV +G+ALI+MY
Sbjct: 417 LFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYS 476
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V + +F + +++ SW S+I NG S+AL +F M G +PD++T
Sbjct: 477 KCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIG 536
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ +EG + + + ++ + ++D+ + G L+EA + +PI
Sbjct: 537 VLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIE 596
Query: 318 N 318
N
Sbjct: 597 N 597
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 188/432 (43%), Gaps = 109/432 (25%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF CLR V +V I+K+ + ++ N LID+Y + + A+K+FD+M
Sbjct: 201 PFVLKAIGCLRD--VRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEM 258
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ ++ +WN +I SG+ + RF +A+ F
Sbjct: 259 TTRDSVSWNVMI-------------------------------SGYVRCRRFEDAINTFR 287
Query: 141 KMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M E N E + S LSAC + ++G ++H + K + +AL+DMY KC
Sbjct: 288 EMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKC 346
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PA-------------- 233
G ++ AR +FD M +N++ W S+I+ Y G P
Sbjct: 347 GCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYV 406
Query: 234 -----SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F M I+PD+ T+ ++++ CA L A ++G IH L ++ D+
Sbjct: 407 QFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDV 465
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
V+G AL++MY+KCG ++++ +F + ++ S TS++ G A
Sbjct: 466 VVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA------------------ 507
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
NG+ EAL LF ++R P TF +L+AC +H
Sbjct: 508 -------------MNGKTSEALRLFSEMERVGAKPDDITFIGVLSAC-----------SH 543
Query: 409 THVVKHGLRFLS 420
+V+ G RF +
Sbjct: 544 GGLVEEGRRFFN 555
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 10/254 (3%)
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+ +++ + +++ A +F + + ++ +N ++ Y + G + L LF+ L
Sbjct: 129 RDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQL 188
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + + P +T+ +L A L D++ G + +VK G+ D +V NSLIDMY
Sbjct: 189 REDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDL------DNYVYNSLIDMY 242
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVTM 495
+ +VE+ ++F+ M RD VSWN MI G + +A+ F++M G EKPD T+
Sbjct: 243 YELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATV 302
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ L AC+ +E G + + + KE G D+ ++D+ + GCL+ A+ + + M
Sbjct: 303 VSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMS 360
Query: 556 MQPDAVIWGSLLAA 569
M+ + + W S+++
Sbjct: 361 MK-NVICWTSMISG 373
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/677 (35%), Positives = 370/677 (54%), Gaps = 68/677 (10%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
T R+++++ D D+ F L SC +S+ D R+H ++ S+ + + N L++
Sbjct: 42 TLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLN 101
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KCG L A++VF KM R+ SW+ M
Sbjct: 102 MYKKCGSLSHAKRVFAKMERT------------------------------RNVISWSIM 131
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
A H EAL +F M ++ + + LSAC+ + G +H+ ++ S +
Sbjct: 132 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF 191
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRE--RNIVSWNSLITCYEQNGPASDALEVF 240
S++ + +A++ MYG+CG V AR+VFD M E R++VSWN +++ Y N DA++++
Sbjct: 192 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLY 251
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
RM + PD+VT S++SAC+S G +H +++ ++L ++++GNALV MYAK
Sbjct: 252 QRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALVSMYAK 307
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG EAR VFD+M R+++S T+++S Y + V A +F +MLE
Sbjct: 308 CGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE------------L 355
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+NG ++ V P F +LNACA+++ L+ G+ GL
Sbjct: 356 EKNGSSQR------------VKPDALAFVTILNACADVSALEQGKMVSEQAASCGL---- 399
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEALGL 479
SD VG +++++Y KCG +E+ RIF+ + R V WNAMI AQ G EAL L
Sbjct: 400 --SSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKL 457
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH-GLAPLKDHYTCMVDLL 538
F +M + G +PD + + +L ACSH GL ++G+ YF+SM+ E+ + H+ C+ DLL
Sbjct: 458 FWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLL 517
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GR G L EA+ +E +P++PDAV W SLLAAC+ HR++ + VA KLL +EP + YV
Sbjct: 518 GRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 577
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LSN+YAEL +W V +VRK M ++GV K+ G S IEI +++ F D HP N+EI
Sbjct: 578 ALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIRE 637
Query: 659 VLKMLTREMKRVGYVPN 675
L L +MK GYVP+
Sbjct: 638 ELAKLHSQMKECGYVPD 654
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 206/451 (45%), Gaps = 85/451 (18%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY C A+ FD + +RN+ SW L+ + +G + + L RM G+ PD VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ + +C + ++G++IH +++ +L D + NAL++MY KCG L+ A+ VF +M
Sbjct: 61 FITALGSCGDPESLRDGIRIH-QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 315 P-IRNVVSETSMVSGYAKASSVKSARLMFTKML--------------------------- 346
RNV+S + M +A +V A F ML
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 347 ------------ERNVVSWNALIAGYTQNGENEEALGLF--------------------- 373
E ++ NA++ Y + G EEA +F
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 374 ---------RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+L +R + P T+ +LL+AC++ D+ LGR H +V L E
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL------EK 293
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
++ VGN+L+ MY KCGS + +F+ M +R +SW +I + EA LF++ML
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQML 353
Query: 485 LCGE-------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+ KPD + + +L AC+ +E+G K S + GL+ K T +V+L
Sbjct: 354 ELEKNGSSQRVKPDALAFVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNL 412
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G+ G ++EA+ + +A+ +PD +W +++A
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 159/345 (46%), Gaps = 49/345 (14%)
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
YA S A+ F + +RN+ SW L+A + +G+++E L ++++ V P TF
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L +C + L+ G + H VV L E D V N+L++MY KCGS+ R+
Sbjct: 62 ITALGSCGDPESLRDGIRIHQMVVDSRL------EIDPKVSNALLNMYKKCGSLSHAKRV 115
Query: 449 FETMVE-RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
F M R+ +SW+ M A +G EAL F+ MLL G K M+ +L ACS L
Sbjct: 116 FAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPAL 175
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA-------------- 553
V++GR S ++ + L M + GR G ++EA+ + +A
Sbjct: 176 VQDGRMIHSCIALSGFESELLVANAVMT-MYGRCGAVEEARKVFDAMDEALRDVVSWNIM 234
Query: 554 -------------------MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL--EIEPS 592
M ++PD V + SLL+AC ++ LG + K+++ E+E +
Sbjct: 235 LSTYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L+S MYA+ G E V M +R ++ SW I+
Sbjct: 295 VIVGNALVS-MYAKCGSHTEARAVFDKMEQRSII-----SWTTII 333
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY C S D F+ + +R+ SW ++ A +G E L ++M G +PD VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I L +C + +G + M + L ++++ + G L AK + M
Sbjct: 61 FITALGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 555 PMQPDAVIWGSLLAACKVHRNI--MLGEYVAKKLLEIEPSNSGPYVLLS 601
+ + W + A +H N+ L + LL I+ + S +LS
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILS 168
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/629 (36%), Positives = 349/629 (55%), Gaps = 66/629 (10%)
Query: 67 CGCLYGARKVFDKMSNKNVF-------------TWNSIITGLLKWGFIDDASRLFASMPE 113
CGCL FD++ K V S++ +K ++D R+F M
Sbjct: 102 CGCL------FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRV 155
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
++ SW S+++G+ Q+ +AL F +M E + ++F + L A + G QV
Sbjct: 156 KNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV 215
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H ++ KS S +++G+++++MY K VS A+ VFD M RN VSWNS+I + NG
Sbjct: 216 HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN----DLV 289
+A E+F RM G++ + A+V+ CA++ Q+H C+ ++N DL
Sbjct: 276 LEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLH-----CQVIKNGSDFDLN 330
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ AL+ Y+KC ++++A +F M+ G +N
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLF------------CMMHGV------------------QN 360
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACA-NLADLQLGRQA 407
VVSW A+I+GY QNG + A+ LF ++RE V P +TF ++LNACA A ++ G+Q
Sbjct: 361 VVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQF 420
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H+ +K SG + + V ++L+ MY K G++E +F+ V+RD VSWN+MI G
Sbjct: 421 HSCSIK------SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY 474
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
AQ+G G ++L +F++M + D +T IGV+ AC+HAGLV EG++YF M K++ + P
Sbjct: 475 AQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPT 534
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY+CMVDL RAG L++A LI MP A IW +LLAAC+VH N+ LGE A+KL+
Sbjct: 535 MEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLI 594
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
++P +S YVLLSN+YA G W E +VRKLM + V K+ G SWIE+ FM D
Sbjct: 595 SLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGD 654
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
HP + IYL L+ L+ +K GY P+
Sbjct: 655 LSHPQSDRIYLKLEELSIRLKDAGYYPDT 683
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 243/493 (49%), Gaps = 45/493 (9%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ +LF P++ N ++ F+++D+ EAL F+ + S L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D +G QVH K + DV +G++L+DMY K V RVFD MR +N+VSW SL
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y QNG AL++F +M GI+P+ T A+V+ A+ A ++G+Q+H +++
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-SG 223
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L + + +GN++V+MY+K +++A+ VFD M RN VS
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS---------------------- 261
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
WN++IAG+ NG + EA LF ++ E V T F ++ CAN+ ++
Sbjct: 262 ---------WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSF 312
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNA 462
+Q H V+K+G F D+ + +L+ Y KC ++D ++F M ++ VSW A
Sbjct: 313 AKQLHCQVIKNGSDF------DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 463 MIVGCAQNGYGTEALGLFKKMLL-CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
+I G QNG A+ LF +M G +P+ T VL AC+ E K F S S +
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 426
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH----RNIM 577
G + + +V + + G ++ A + + + D V W S+++ H +++
Sbjct: 427 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQHGCGKKSLK 485
Query: 578 LGEYVAKKLLEIE 590
+ E + K LE++
Sbjct: 486 IFEEMRSKNLELD 498
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 188/376 (50%), Gaps = 42/376 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L +V +VH +IKS S IF+ N ++++Y+K + A+ VFD M
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME 255
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+N +WNS+I GF+ + L EA F +
Sbjct: 256 NRNAVSWNSMIA-----GFVTNGLDL--------------------------EAFELFYR 284
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E L++ F + + CA + Q+H + K+ D+ + +AL+ Y KC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVV 259
+ A ++F M +N+VSW ++I+ Y QNG A+ +F +M G+EP+E T +SV+
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404
Query: 260 SACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ACA+ A+ ++G Q H+ ++ N L + +ALV MYAK G + A VF R R+
Sbjct: 405 NACAAPTASVEQGKQFHSCSIK-SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 463
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFR 374
+VS SM+SGYA+ K + +F +M +N+ +++ +I+ T G E F
Sbjct: 464 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 523
Query: 375 LLKRE-SVCPT--HYT 387
L+ ++ + PT HY+
Sbjct: 524 LMVKDYHIVPTMEHYS 539
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 32/302 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L + FA ++ C K +S +++H ++IK+ ++ I+ L+ Y+KC + A K+
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 77 FDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F M +NV +W +II+G ++ G D A LF M + N
Sbjct: 352 FCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPN--------------- 396
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
E++F S L+ACA + + G Q H+ KS +S+ + + SAL+
Sbjct: 397 ---------------EFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVT 441
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY K G + A VF +R++VSWNS+I+ Y Q+G +L++F M + +E D +T
Sbjct: 442 MYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGIT 501
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC EG + +++ + + + +VD+Y++ G L +A + ++M
Sbjct: 502 FIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561
Query: 315 PI 316
P
Sbjct: 562 PF 563
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/625 (35%), Positives = 352/625 (56%), Gaps = 41/625 (6%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
+ ++ + +C + +++ ++ ++ NS + + AS F+++ +
Sbjct: 31 LSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPT 90
Query: 116 QCSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
+ S+N M+ G + ++ S AL ++ +M + ++ AC+ + + G H
Sbjct: 91 EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ + D ++ +LI MY +CG++ AR+VFD + ++++VSWNS+I+ Y + A
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+A+ +F MM +G +P+E++L SV+ AC L K G + ++ K+ + +G+AL
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE-NKMTLNYFMGSAL 269
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ MY KCG L SAR +F M +++ V+WN
Sbjct: 270 IHMYGKCGDL-------------------------------VSARRIFDSMKKKDKVTWN 298
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I GY QNG +EEA+ LF+ ++ S P T +L+ACA++ L LG+Q + +
Sbjct: 299 AMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER 358
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G + D++VG +L+DMY KCGS+++ R+F M ++ VSWNAMI A +G
Sbjct: 359 GF------QDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQ 412
Query: 475 EALGLFKKMLLCGE--KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EAL LFK M+ G P+ +T +GVL AC HAGLV+EGR+ F MS GL P +HY+
Sbjct: 413 EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYS 472
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDL RAG L+EA + MP +PD VI G+LL AC+ +NI + E V K LLE+EPS
Sbjct: 473 CMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPS 532
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
NSG YV+ S +YA L RW + R+R LM+++GV K PGCSWI+I ++ F D H
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQE 592
Query: 653 NKEIYLVLKMLTREMKRVGYVPNAS 677
EI+ +L +L +++R GY+PNA+
Sbjct: 593 WIEIHQILDLLIDDLRREGYIPNAN 617
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 166/376 (44%), Gaps = 61/376 (16%)
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
N L + + +C + + + + ++ ++ S + A A + F+ +
Sbjct: 27 NRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNI 86
Query: 346 LERNVVSWNALIAGY-TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
L+ S+N +I G T ++ AL + +K + P + T+ L AC+NL ++ G
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R H V++ GL + D V +SLI MY +CG + D ++F+ + ++D VSWN+MI
Sbjct: 147 RMGHCSVIRRGL------DEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMI 200
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG------LVEE-------- 510
G ++ + EA+GLF++M+ G +P+ ++++ VL AC G VEE
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMT 260
Query: 511 ---------------------GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
R+ F SM K+ K + M+ + G +EA
Sbjct: 261 LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKD-----KVTWNAMITGYAQNGMSEEAIK 315
Query: 550 LIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG----PYV--LL 600
L + M M PD + +L+AC + LG+ V EI S G YV L
Sbjct: 316 LFQDMRMSSTAPDQITLIGILSACASIGALDLGKQV-----EIYASERGFQDDVYVGTAL 370
Query: 601 SNMYAELGRWGEVVRV 616
+MYA+ G RV
Sbjct: 371 VDMYAKCGSLDNAFRV 386
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 357/660 (54%), Gaps = 84/660 (12%)
Query: 32 SKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
+ + + R AR+I + S + + ++I Y + L A K+FD+MS ++V +WNS
Sbjct: 20 ANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNS 79
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I G L G + A+RLF MPE++ SW +MV+G+ + R A F+ MH +
Sbjct: 80 MIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVK----- 134
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
DV +A++ Y + GRV R+F+
Sbjct: 135 ----------------------------------DVAAWNAMVHGYFENGRVEEGVRLFE 160
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
M R+++SW S+I + NG + +AL VF +M+ SG+EP T A V+SACA+ F
Sbjct: 161 EMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNL 220
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G+Q+H +++ LG C F S+++ YA
Sbjct: 221 GVQVHGHVVK---------LG-----------------CFFHEFI------SVSLITFYA 248
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
++ A +F + L +NVV W AL+ Y N ++++AL +F + + P TF
Sbjct: 249 NCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSI 308
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L AC L L G++ HT +K GL E+D+FVGNSL+ MY +CG+V +F
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGL------ETDVFVGNSLVVMYTECGNVNSAVAVFR 362
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ E+D VSWN++IVG AQ+G+G AL F +M+ G P+ +T G+L ACS +G++ +
Sbjct: 363 NINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLK 422
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
GR +F +S+ HY CMVD+LGR G LDEA+ L+ MP++ +++IW +LL+AC
Sbjct: 423 GRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSAC 482
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+VH N+ + E AK +L++EP+ S YVLLSN+YA GRW +V R+R M++ G+VKQPG
Sbjct: 483 RVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPG 542
Query: 631 CSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
SW+ + G + F+ D+ HPL++ IY L L +++K GYVP+ +DE EE
Sbjct: 543 SSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEE 602
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 211/478 (44%), Gaps = 73/478 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ K++ R+ + D ++ R+ ++ N +I CG L A ++FD+M
Sbjct: 46 YTKMIAGYTRNDRLCDALKLFDRMS----VRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101
Query: 82 NKNVFTWNSIITGLLKWG--------FID-----------------------DASRLFAS 110
KNV +W +++ G LK+G F+D + RLF
Sbjct: 102 EKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEE 161
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
MP RD SW SM+ G + + EAL F KM + +F LSACA +V+F +G
Sbjct: 162 MPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLG 221
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
QVH + K ++ +LI Y C ++ A ++F+ +N+V W +L+T Y N
Sbjct: 222 VQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWN 281
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
DAL VF M G P++ T + + AC L A +G +IH ++ L D+ +
Sbjct: 282 NKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKL-GLETDVFV 340
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GN+LV MY +CG +N A VF + +++VS S++ G A
Sbjct: 341 GNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSA-------------------- 380
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
Q+G AL F + R V P TF LL+AC+ L GR +
Sbjct: 381 -----------QHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEY 429
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ ++ L + ++D+ +CG +++ + M V+ + + W A++ C
Sbjct: 430 ISRYKSNVLRPQHYA-----CMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSAC 482
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 140/300 (46%), Gaps = 35/300 (11%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S FA +L +C + + +VH ++K FI LI YA C + A K+F++
Sbjct: 203 STFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNE 262
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
KNV W +++T + WN ++ +AL F
Sbjct: 263 TLTKNVVKWTALLTAYV----------------------WN---------NKHQDALRVF 291
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M ++ +F L AC G G ++H + K +DV++G++L+ MY +C
Sbjct: 292 GDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTEC 351
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V+ A VF + E++IVSWNS+I Q+G AL F +M+ G++P+E+T ++
Sbjct: 352 GNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLL 411
Query: 260 SACASLAAFKEGLQIHARLMRCEK--LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
SAC+ +G + R + LR +VD+ +CGKL+EA + MP++
Sbjct: 412 SACSRSGMLLKGRCFFEYISRYKSNVLRPQHYA--CMVDILGRCGKLDEAEELVRYMPVK 469
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 9 QIVGDL----AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++ GD+ A + S F+ L +C +++ + +H IK +++F+ N L+ +Y
Sbjct: 289 RVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMY 348
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
+CG + A VF ++ K++ +WNSII
Sbjct: 349 TECGNVNSAVAVFRNINEKDIVSWNSIIV------------------------------- 377
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G AQH AL +F +M +E +F LSAC+ S G + SRY S
Sbjct: 378 GSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI--SRYKS 435
Query: 185 DVYMG---SALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLIT 225
+V + ++D+ G+CG++ A + M + N + W +L++
Sbjct: 436 NVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLS 480
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/522 (38%), Positives = 317/522 (60%), Gaps = 39/522 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S ++ACA +HA L+ S+++ V++ ++LI +Y KCG V+ ARRVFDGM
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++ SW SLI Y QN +AL + M+ +P+ T AS++ A + A+ G Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IHA ++ + +D+ +G+AL+DMYA+CG+++ A VFD++
Sbjct: 187 IHALTVKYD-WHDDVYVGSALLDMYARCGRMDMAIAVFDQLE------------------ 227
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+N VSWNALIAG+ + G+ E L +F ++R TH+T+ ++ +
Sbjct: 228 -------------SKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFS 274
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A A + L+ G+ H H++K SGE FVGN+++DMY K GS+ D ++F+ +
Sbjct: 275 AIAGIGALEQGKWVHAHMIK------SGERLSAFVGNTILDMYAKSGSMIDARKVFDRVD 328
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++D V+WN+M+ AQ G G EA+ F++M CG + +T + +L ACSH GLV+EG++
Sbjct: 329 KKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQ 388
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M KE+ L P DHY +VDLLGRAG L++A I MPM+P A +WG+LL +C++H
Sbjct: 389 YFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N +G++ A + E++P ++GP VLL N+YA G+W RVRK+M+ GV K+P CSW
Sbjct: 448 KNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSW 507
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+EI V++F+ D HP ++EIY + ++ ++++ GYVPN
Sbjct: 508 VEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPN 549
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 223/454 (49%), Gaps = 72/454 (15%)
Query: 17 LDSSP--FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
L ++P + L+ +C R +S+ D R +HA + SQFA +F+ N LI +Y KCG
Sbjct: 60 LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGA----- 114
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+ DA R+F MP RD CSW S+++G+AQ+D E
Sbjct: 115 --------------------------VADARRVFDGMPARDMCSWTSLIAGYAQNDMPDE 148
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
ALG M F + ++F S L A S +G Q+HAL K + DVY+GSAL+D
Sbjct: 149 ALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLD 208
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY +CGR+ A VFD + +N VSWN+LI + + G L +F M +G E T
Sbjct: 209 MYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFT 268
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+SV SA A + A ++G +HA +++ + R +GN ++DMYAK G + +AR VFDR+
Sbjct: 269 YSSVFSAIAGIGALEQGKWVHAHMIKSGE-RLSAFVGNTILDMYAKSGSMIDARKVFDRV 327
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
++VV+ WN+++ + Q G EA+ F
Sbjct: 328 DKKDVVT-------------------------------WNSMLTAFAQYGLGREAVTHFE 356
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+++ V TF ++L AC++ ++ G+Q + ++ L E D +V +++D
Sbjct: 357 EMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE----PEIDHYV--TVVD 410
Query: 435 MYMKCGSVEDG-CRIFETMVERDWVSWNAMIVGC 467
+ + G + D IF+ ++ W A++ C
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSC 444
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 244/721 (33%), Positives = 384/721 (53%), Gaps = 99/721 (13%)
Query: 31 RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
+ + + +RV + +I A+ N ++ V+AK G + AR++FDKMS +N+ +WN+
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHAT----YNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNT 84
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSW------------------------------- 119
+I G L +++A +LF M ERD SW
Sbjct: 85 MIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTAC 144
Query: 120 -NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-- 176
N+M++G+A+ RF +A F KM ++ S+ S L+ + + KMG +
Sbjct: 145 WNAMIAGYAKKGRFDDAEKVFEKMPVKDLV----SYNSMLAGY--TQNGKMGLAMKFFER 198
Query: 177 ----------LSKSRYSSDVYMGSA-----------------LIDMYGKCGRVSCARRVF 209
L + + ++ +GSA ++ + + G++ AR++F
Sbjct: 199 MAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLF 258
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRM----------MASGI-------EPDE 252
D M +N+VSWN++I Y Q+ +A+++F M +G E E
Sbjct: 259 DRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEARE 318
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKL-----RNDLVLGNALVDMYAKCGKLNEA 307
V A+ A GL + R+ ++ + D + N+++ Y + G+++EA
Sbjct: 319 VYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEA 378
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+F +MP++N VS +M+SGYA+A + A +F M RNV+SWN+LI G+ QNG
Sbjct: 379 LNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYL 438
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+AL L+ +E P TF L++CANLA LQ+G+Q H ++K SG +D+F
Sbjct: 439 DALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILK------SGYINDLF 492
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+LI MY KCG V+ ++F+ + D +SWN++I G A NGY EA F++M G
Sbjct: 493 VSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEG 552
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT IG+L ACSHAGL +G F M + + PL +HY+C+VDLLGR G L+EA
Sbjct: 553 TVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEA 612
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
++ M ++ +A +WGSLLAAC+VH+N+ LG+ A +LLE+EP N+ Y+ LSNM+AE
Sbjct: 613 FNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEA 672
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GRW +V R+R LMR+R K PGCSWIE+ + F+ D + I ++L L+ M
Sbjct: 673 GRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHM 732
Query: 668 K 668
+
Sbjct: 733 R 733
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 168/310 (54%), Gaps = 4/310 (1%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++ + + D + L+ +++ + + +V +++ K + N +I Y +
Sbjct: 317 REVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKR----DAICWNSMIAGYCQS 372
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + A +F +M KN +WN++I+G + G +D A+ +F +M R+ SWNS+++GF
Sbjct: 373 GRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFL 432
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+ + +AL V M E + +F +LS+CA ++G Q+H L+ KS Y +D++
Sbjct: 433 QNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLF 492
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +ALI MY KCG V A +VF + +++SWNSLI+ Y NG A++A F +M + G
Sbjct: 493 VSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEG 552
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
PDEVT ++SAC+ +G+ + ++ + + LVD+ + G+L EA
Sbjct: 553 TVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEA 612
Query: 308 RCVFDRMPIR 317
+ M ++
Sbjct: 613 FNIVRGMKVK 622
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 139/304 (45%), Gaps = 50/304 (16%)
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
K GK++EA+ VF + +N + SMV+ +AK V AR +F KM +RN+VSWN +IA
Sbjct: 28 GKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIA 87
Query: 359 GYTQNGENEEALGLFRLLKRE-----SVCPTHYTFGNLLNACANLADL---QLGRQAHTH 410
GY N EEA LF L+ ++ T YT +L L +L +L
Sbjct: 88 GYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNA 147
Query: 411 VV----KHGLRFLSGEE-------SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
++ K G RF E+ D+ NS++ Y + G + + FE M ER+ VS
Sbjct: 148 MIAGYAKKG-RFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVS 206
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WN M+ G N A LF+K+ P+ V+ + +LC + G + E RK F M
Sbjct: 207 WNLMVAGFVNNCDLGSAWELFEKI----PDPNAVSWVTMLCGFARHGKIVEARKLFDRMP 262
Query: 520 KEHGLA------------------------PLKD--HYTCMVDLLGRAGCLDEAKTLIEA 553
++ ++ P KD +T M++ R G LDEA+ +
Sbjct: 263 CKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQ 322
Query: 554 MPMQ 557
MP +
Sbjct: 323 MPYK 326
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 22/230 (9%)
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G R + ++F N I K G +++ R+F ++ ++ ++N+M+ A+NG +
Sbjct: 6 GTRSTLEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVS 65
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+A LF KM + + V+ ++ H +VEE K F M++ + + M
Sbjct: 66 DARQLFDKM----SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS-----WALM 116
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY-VAKKLLEIEP-S 592
+ R G L++A+ L E +P + D W +++A G + A+K+ E P
Sbjct: 117 ITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKK-----GRFDDAEKVFEKMPVK 171
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW-IEILGHVN 641
+ Y + Y + G+ G ++ + M +R VV SW + + G VN
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV-----SWNLMVAGFVN 216
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/675 (33%), Positives = 368/675 (54%), Gaps = 49/675 (7%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P LL +C KS+S +++HA++I + +RL++ Y L A+
Sbjct: 83 PIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQ------ 136
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
F+ ++S D WN ++S + ++ F EAL +
Sbjct: 137 -------------------FVTESSNTL------DPLHWNLLISAYVRNGFFVEALCVYK 171
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M ++ EY++ S L AC S+DF G +VH + S +++ +AL+ MYG+ G
Sbjct: 172 NMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFG 231
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR +FD M R+ VSWN++I+CY G +A ++F M G+E + + ++
Sbjct: 232 KLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAG 291
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRN-DLVLG-NALVDMYA-KCGKL---NEARCVFDRM 314
C F+ LQ+ +++ L +V+G NA + A K GK + R FD
Sbjct: 292 GCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDV- 350
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
NV + ++++ Y++ + A ++F + E+ +++WNA+++GY EE LFR
Sbjct: 351 -FDNV--KNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFR 407
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ +E + P + T ++L CA +A+LQ G++ H +++KH +F E + + N+L+D
Sbjct: 408 EMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHK-QF----EEYLLLWNALVD 462
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY + G V + ++F+++ +RD V++ +MI+G G G L LF++M KPDHVT
Sbjct: 463 MYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVT 522
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
M+ VL ACSH+GLV +G+ F M HG+ P +HY CM DL GRAG L++AK I M
Sbjct: 523 MVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGM 582
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P +P + +W +LL AC++H N +GE+ A KLLE++P +SG YVL++NMYA G W ++
Sbjct: 583 PYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLA 642
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VR MR GV K PGC+W+++ + F+V D +P EIY ++ L MK GYV
Sbjct: 643 EVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNELMKDAGYVR 702
Query: 675 N---ASDDEAYEEQN 686
+ S +E +EE N
Sbjct: 703 SEELVSSEEDFEEMN 717
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 181/384 (47%), Gaps = 36/384 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C S + VH I S +F+ N L+ +Y + G L AR +F
Sbjct: 181 DEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLF 240
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
D M ++ +WN+II+ G +A +LF SM E + WN++ G F
Sbjct: 241 DNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFR 300
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
AL +M + + L + L+AC+ K+G ++H ++ + + +ALI
Sbjct: 301 GALQLISQMRT-SIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALI 359
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +C + A +F E+ +++WN++++ Y + +F M+ G+EP+ V
Sbjct: 360 TMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYV 419
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ASV+ CA +A + G + H +M+ ++ L+L NALVDMY++ G++ EAR VFD
Sbjct: 420 TIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDS 479
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ R+ V+ TSM I GY GE E L LF
Sbjct: 480 LTKRDEVTYTSM-------------------------------ILGYGMKGEGETTLKLF 508
Query: 374 RLLKRESVCPTHYTFGNLLNACAN 397
+ + + P H T +L AC++
Sbjct: 509 EEMCKLEIKPDHVTMVAVLTACSH 532
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 32/302 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD+ L++C ++ + +H +++ F ++N LI +Y++C L A +
Sbjct: 315 LDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFIL 374
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + K + TWN +M+SG+A DR+ E
Sbjct: 375 FHRTEEKGLITWN-------------------------------AMLSGYAHMDRYEEVT 403
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDM 195
F +M E + + S L CA + + G + H + K + + + + +AL+DM
Sbjct: 404 FLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDM 463
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + GRV AR+VFD + +R+ V++ S+I Y G L++F M I+PD VT+
Sbjct: 464 YSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTM 523
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V++AC+ +G + R++ + L + D++ + G LN+A+ MP
Sbjct: 524 VAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMP 583
Query: 316 IR 317
+
Sbjct: 584 YK 585
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 365/643 (56%), Gaps = 38/643 (5%)
Query: 44 RIIKSQFASEIFI--QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
R++ ++F FI +N LI Y++ G + AR VFD+M +KN+ +WNSI+ G +
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRP 145
Query: 102 DDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC 161
+A +F M ER+ SWN +VSG+ + +EA F +M N S +
Sbjct: 146 QEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV-------SWTAMV 198
Query: 162 AGSVDFKMGTQVHALL----SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
G V M ++ L K+ S V +G L + GR+ A R+FD M E+++
Sbjct: 199 RGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE-----GRIDEACRLFDMMPEKDV 253
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ--IH 275
V+ ++I Y Q G +A +F DE+ +VVS + + + Q I
Sbjct: 254 VTRTNMIGGYCQVGRLVEARMLF----------DEMPRRNVVSWTTMITGYVQNQQVDIA 303
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+L +N+ V A++ Y CG+L+EA +F+ MPI++VV+ +M+ + + V
Sbjct: 304 RKLFEVMPEKNE-VSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEV 362
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
AR +F +M E++ +W+A+I Y + G +AL LFR+++RE + P + ++L+ C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA+L GR+ H +V+ S + D++V + L+ MY+KCG++ ++F+ +
Sbjct: 423 AGLANLDHGREIHAQLVR------SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V WN++I G AQ+G G EAL +F M G PD VT +GVL ACS+ G V++G + F
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+SM ++ + +HY CMVDLLGRAG L+EA LIE MPM+ DA+IWG+LL AC+ H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ L E AKKLL +EP N+GP++LLSN+YA GRW +V +R+ MR R V K PGCSWI
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 636 ILGHVNVFMVKDKR-HPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ V+ F D HP + EI +L+ L+ ++ GY P+ S
Sbjct: 657 VEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQS 699
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 33/202 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C ++ R +HA++++SQF ++++ + L+ +Y KCG L A++VFD+ + K+
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V WNSIIT G+AQH EAL F MH
Sbjct: 478 VVMWNSIIT-------------------------------GYAQHGLGVEALRVFHDMHF 506
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ +F LSAC+ + + K G ++ +++ +K + + + ++D+ G+ G+++
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566
Query: 204 CARRVFDGMR-ERNIVSWNSLI 224
A + + M E + + W +L+
Sbjct: 567 EAMDLIEKMPMEADAIIWGALL 588
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/643 (36%), Positives = 365/643 (56%), Gaps = 38/643 (5%)
Query: 44 RIIKSQFASEIFI--QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
R++ ++F FI +N LI Y++ G + AR VFD+M +KN+ +WNSI+ G +
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRP 145
Query: 102 DDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC 161
+A +F M ER+ SWN +VSG+ + +EA F +M N S +
Sbjct: 146 QEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV-------SWTAMV 198
Query: 162 AGSVDFKMGTQVHALL----SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
G V M ++ L K+ S V +G L + GR+ A R+FD M E+++
Sbjct: 199 RGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQE-----GRIDEACRLFDMMPEKDV 253
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ--IH 275
V+ ++I Y Q G +A +F DE+ +VVS + + + Q I
Sbjct: 254 VTRTNMIGGYCQVGRLVEARMLF----------DEMPRRNVVSWTTMITGYVQNQQVDIA 303
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+L +N+ V A++ Y CG+L+EA +F+ MPI++VV+ +M+ + + V
Sbjct: 304 RKLFEVMPEKNE-VSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEV 362
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
AR +F +M E++ +W+A+I Y + G +AL LFR+++RE + P + ++L+ C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA+L GR+ H +V+ S + D++V + L+ MY+KCG++ ++F+ +
Sbjct: 423 AGLANLDHGREIHAQLVR------SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVK 476
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V WN++I G AQ+G G EAL +F M G PD VT +GVL ACS+ G V++G + F
Sbjct: 477 DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIF 536
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+SM ++ + +HY CMVDLLGRAG L+EA LIE MPM+ DA+IWG+LL AC+ H
Sbjct: 537 NSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMK 596
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ L E AKKLL +EP N+GP++LLSN+YA GRW +V +R+ MR R V K PGCSWI
Sbjct: 597 LDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Query: 636 ILGHVNVFMVKDKR-HPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ V+ F D HP + EI +L+ L+ ++ GY P+ S
Sbjct: 657 VEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQS 699
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 33/202 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C ++ R +HA++++SQF ++++ + L+ +Y KCG L A++VFD+ + K+
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V WNSIIT G+AQH EAL F MH
Sbjct: 478 VVMWNSIIT-------------------------------GYAQHGLGVEALRVFHDMHF 506
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ +F LSAC+ + + K G ++ +++ +K + + + ++D+ G+ G+++
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566
Query: 204 CARRVFDGMR-ERNIVSWNSLI 224
A + + M E + + W +L+
Sbjct: 567 EAMDLIEKMPMEADAIIWGALL 588
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 362/661 (54%), Gaps = 77/661 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L+ +C +S + ++VH ++K F S+++++N LI+ ++ C
Sbjct: 77 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVC---------- 126
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
SN + DA R+F D SWNS+++G+ + EA
Sbjct: 127 ---SN------------------MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKH 165
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ H + +S +S+ ++I ++G
Sbjct: 166 IY----------------------------------HQMPERSIIASN-----SMIVLFG 186
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
G V A ++FD M E+++V+W++LI C++QN +A+ FV M G+ DEV S
Sbjct: 187 MRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 246
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA+L G IH+ ++ + + L NAL+ MY+KCG + AR +FD +
Sbjct: 247 ALSACANLLVVNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 305
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++S SM+SGY K + V +A+ +F M E++VVSW+++I+GY QN +E L LF+ ++
Sbjct: 306 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 365
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
P T ++++ACA LA L+ G+ H ++ ++GL ++ +G +LIDMYM
Sbjct: 366 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI------NVILGTTLIDMYM 419
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG VE +F M+E+ +WNA+I+G A NG +L +F M C P+ +T +G
Sbjct: 420 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 479
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC H GLV+EG+ +F SM +H + P HY CMVDLLGRAG L EA+ L+ MPM
Sbjct: 480 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 539
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD WG+LL ACK H + +G V +KL+E++P + G +VLLSN+YA G+W +V+ +R
Sbjct: 540 PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIR 599
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+M K V+K PGCS IE G ++ F+ DK HP I +L + ++K GY P+ +
Sbjct: 600 GMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDIN 659
Query: 678 D 678
+
Sbjct: 660 E 660
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 201/423 (47%), Gaps = 59/423 (13%)
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ RR+F+ + N WN +I Y Q A ++ M+++ + D T ++
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ + E Q+H +++ +D+ + N L++ ++ C + +A VF+ + + V
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKL-GFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV 145
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVS---------------------------- 352
S S+++GY + +V+ A+ ++ +M ER++++
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKD 205
Query: 353 ---WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
W+ALIA + QN EEA+ F + + V + L+ACANL + +G+ H+
Sbjct: 206 MVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 265
Query: 410 HVVKHG----------LRFLSGEESDIFVG---------------NSLIDMYMKCGSVED 444
+K G L ++ + DI V NS+I Y+KC V++
Sbjct: 266 LSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDN 325
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
IF++M E+D VSW++MI G AQN E L LF++M + G KPD T++ V+ AC+
Sbjct: 326 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 385
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+E+G K+ + K +GL T ++D+ + GC++ A + M ++ W
Sbjct: 386 LAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM-IEKGISTWN 443
Query: 565 SLL 567
+L+
Sbjct: 444 ALI 446
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 141/321 (43%), Gaps = 38/321 (11%)
Query: 314 MPIRNVVSETSMVSGYAKASS------VKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
M + + ET S K S+ + R +F + N WN +I Y Q
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
A L++ + + +YT+ L+ AC+ +Q H HV+K G +SD++
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGF------DSDVY 114
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N+LI+ + C ++ D CR+F D VSWN+++ G + G EA ++ +M
Sbjct: 115 VRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM---- 170
Query: 488 EKPDH--VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
P+ + ++ GLV E K F M ++ + ++ ++ + +
Sbjct: 171 --PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT-----WSALIACFQQNEMYE 223
Query: 546 EA-KTLI--EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
EA +T + + + D V+ S L+AC + +G+ + L+I + Y+ L N
Sbjct: 224 EAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI---GTESYINLQN 280
Query: 603 ----MYAELGRWGEVVRVRKL 619
MY+ + G+++ RKL
Sbjct: 281 ALIYMYS---KCGDIMVARKL 298
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 332/570 (58%), Gaps = 13/570 (2%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
P + WNS++ + FSEAL + + Y+F S ++ACAG +DF+M
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+H + + SD+Y+G+ALIDMY + + AR+VF+ M R++VSWNSLI+ Y NG
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 232 PASDALEVFVRM------MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
++ALE++ + M + +PD +T+ S++ AC L + G +H M
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVH-DYMITSGYE 254
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
D N L++MYAKCG L ++ VF M ++ VS SM++ Y + + + +F M
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
R++++WN +IA + + L + ++ E V P T ++L C+ LA + G+
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
+ H + K GL ESD+ VGN LI+MY KCGS+ + ++F+ M +D V+W A+I
Sbjct: 375 EIHGCIFKLGL------ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALIS 428
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
C G G +A+ F +M G PDHV + ++ ACSH+GLVEEG YF M K++ +
Sbjct: 429 ACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 488
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY C+VDLL R+ LD+A+ I +MP++PD+ IWG+LL+AC++ + + E V+++
Sbjct: 489 PRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSER 548
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
++E+ P ++G YVL+SN+YA LG+W +V +RK ++ RG+ K PGCSW+EI V VF
Sbjct: 549 IIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGT 608
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
K +E+ +L ML M + GY+ N
Sbjct: 609 GTKFFEQFEEVNKLLGMLAGLMAKEGYIAN 638
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 191/397 (48%), Gaps = 61/397 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F ++++C + +H R++ F S+++I N LID+Y + L ARKVF
Sbjct: 114 DTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVF 173
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++V +WNS+I+G G+ WN + + Q ++
Sbjct: 174 EEMPLRDVVSWNSLISGYNANGY------------------WNEALEIYYQ------SIK 209
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M ++ F + S L AC D + G VH + S Y D + LI+MY
Sbjct: 210 LFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF----------------- 240
KCG + ++ VF GM+ ++ VSWNS+I Y QNG D+L+VF
Sbjct: 269 KCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIAS 328
Query: 241 --------------VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
RM G+ PD T+ S++ C+ LAA ++G +IH + + L +
Sbjct: 329 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLES 387
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ +GN L++MY+KCG L + VF M ++VV+ T+++S K A F +M
Sbjct: 388 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 447
Query: 347 ERNV----VSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ V++ A+I + +G EE L F +K++
Sbjct: 448 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKD 484
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
V Q DL + S +L +C + + VH +I S + + N LI++YAK
Sbjct: 215 VNQFKPDLLTITS-----ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 269
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG L +++VF M K+ +WNS+I ++ G + D+ ++F +M RD +WN++++
Sbjct: 270 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASC 329
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+ + L +M +E + S L C+ + G ++H + K SDV
Sbjct: 330 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 389
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+G+ LI+MY KCG + + +VF M+ +++V+W +LI+ G A+ F M A+
Sbjct: 390 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 449
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
GI PD V +++ AC+ +EGL R+ + K+ + +VD+ ++ L++
Sbjct: 450 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 509
Query: 307 ARCVFDRMPIR 317
A MP++
Sbjct: 510 AEDFILSMPLK 520
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 332/572 (58%), Gaps = 50/572 (8%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWNS+++ FA+ +AL F M + + +F + +C+ D G Q+H
Sbjct: 53 SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
Y SD+++ SALIDMY KCG ++ AR++FD + ERN+VSW S+I+ Y QN A +A+
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172
Query: 238 EVFVRMM-----------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+F + G+ D V L V+SACA + +H ++ +
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK-KGFEG 231
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
L +GN L+D YAKCG+++ +R +F M
Sbjct: 232 CLAVGNTLMDAYAKCGEIS-------------------------------VSRKVFDGME 260
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGR 405
E +V SWN+LIA Y QNG + EA LF ++KR V T +L ACA+ LQ+G+
Sbjct: 261 ETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGK 320
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H VVK L E ++ VG S++DMY KCG VE + F+ + ++ SW M+
Sbjct: 321 CIHDQVVKMEL------EDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVA 374
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G +G+G EA+ +F +M+ CG KP+++T + VL ACSHAGL++EG +F+ M E +
Sbjct: 375 GYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVE 434
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY+CMVDLLGRAG L EA LI+ M ++PD ++WGSLL AC++H+N+ LGE A+K
Sbjct: 435 PGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARK 494
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L +++PSN G YVLLSN+YA+ GRW +V R+R LM+ G++K PG S +E G V+VF+V
Sbjct: 495 LFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLV 554
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
DK HP +++IY L L +++ VGY+PN +
Sbjct: 555 GDKEHPQHEKIYEYLDELNVKLQEVGYMPNVT 586
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 248/536 (46%), Gaps = 98/536 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F + SC + +++H + + S+IF+ + LID+Y+KCG L ARK+F
Sbjct: 85 NRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLF 144
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +NV +W S+I+G ++ +A LF D+ ++ +V D
Sbjct: 145 DEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSV----- 199
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
G +SACA + VH L K + + +G+ L+D Y
Sbjct: 200 ---------------LLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYA 244
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLA 256
KCG +S +R+VFDGM E ++ SWNSLI Y QNG + +A +F M+ G + + VTL+
Sbjct: 245 KCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLS 304
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+ ACA A + G IH ++++ E L ++LV+G ++VDMY KCG++ AR FDR+
Sbjct: 305 AVLLACAHSGALQIGKCIHDQVVKME-LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKR 363
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+NV S T MV+GY +G +EA+ +F +
Sbjct: 364 KNVKSWTVMVAGYG-------------------------------MHGHGKEAMKVFYEM 392
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P + TF ++L AC +H ++K G + +
Sbjct: 393 IRCGIKPNYITFVSVLAAC-----------SHAGLLKEGWHWFNK--------------- 426
Query: 437 MKCG-SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
MKC VE G + MV+ ++G A GY EA GL ++M + KPD +
Sbjct: 427 MKCEFDVEPGIEHYSCMVD---------LLGRA--GYLKEAYGLIQEMKV---KPDFIVW 472
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK-DHYTCMVDLLGRAGCLDEAKTL 550
+L AC VE G S K L P +Y + ++ AG D+ + +
Sbjct: 473 GSLLGACRIHKNVELGE---ISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERM 525
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/612 (35%), Positives = 339/612 (55%), Gaps = 69/612 (11%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I LL FI A ++F +P DQ S ++ +++ +EAL FV MH N +
Sbjct: 37 IRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVC 96
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC------------ 199
++ +CA + +G QVH+L+ + + S V+ +ALI+ Y K
Sbjct: 97 FTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDG 156
Query: 200 -------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
G V AR +FD MR+R+IVSWN++I+CY QNG +F
Sbjct: 157 ILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIF 216
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
RM EP+E+TLA+V+S CA L + GL+I +KL ++ LG+
Sbjct: 217 QRMQDEMCEPNEITLATVLSICAKLGDLEMGLRI-------KKLNDNKNLGS-------- 261
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
N++ T+M+ Y K +V RL+F M R+VV+W+A+IAGY
Sbjct: 262 -----------------NMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGY 304
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
QNG + EAL LF +K + P T ++L+ACA L ++ G + ++V GL
Sbjct: 305 AQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLI--- 361
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
S+++V ++L+ MY KCG++ +IF+ + +RD V+WN+MI+G A NG+ +A+ L+
Sbjct: 362 ---SNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALY 418
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+M KP+++T +G++ AC+HAG VE G ++F SM +H ++P +H+ C+VDL R
Sbjct: 419 NRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCR 478
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
+G L +A I M ++P+ VIWG+LL+A ++H N+ L E KKLLE+EP NSG YV+L
Sbjct: 479 SGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVIL 538
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SN+YA GRW E ++VRKLM+ + V K SW+E+ V+ F+V D HP + E+Y +
Sbjct: 539 SNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTI 598
Query: 661 KMLTREMKRVGY 672
L VGY
Sbjct: 599 DGLALLSTWVGY 610
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 226/447 (50%), Gaps = 50/447 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+ SC ++ ++VH+ +I+ F S +F QN LI+ YAK L A +FD + K+
Sbjct: 102 IFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKD 161
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+N +I+ + G + A LF M +R SWN+M+S +AQ+ + + F +M
Sbjct: 162 TIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQD 221
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E +E + + LS CA D +MG ++ L S++ + +A+++MY KCG V
Sbjct: 222 EMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDD 281
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
R VFD M R++V+W+++I Y QNG +++ALE+F M ++ I+P++VTL SV+SACA
Sbjct: 282 GRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQ 341
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + + G +I + L +++ + +AL+ MY+KCG + +AR +FD++P R+ V+ S
Sbjct: 342 LGSVETGERI-GSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNS 400
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+ G A NG E+A+ L+ +K V P
Sbjct: 401 MIMGLAI-------------------------------NGFAEDAIALYNRMKEIEVKPN 429
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMK 438
+ TF L+ AC H V+ GL F SD + + ++D++ +
Sbjct: 430 NITFVGLMTAC-----------THAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCR 478
Query: 439 CGSVEDGCRIFETM-VERDWVSWNAMI 464
G + D M VE + V W ++
Sbjct: 479 SGRLIDAYEFICRMEVEPNVVIWGTLL 505
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 171/330 (51%), Gaps = 8/330 (2%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL----KWGFIDDASRLFASMPERD 115
++ + AK G L ++ NKN+ + + T +L K G +DD +F M RD
Sbjct: 234 VLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRD 293
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+W++M++G+AQ+ R +EAL F M S ++ + S LSACA + G ++ +
Sbjct: 294 VVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGS 353
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+ S+VY+ SAL+ MY KCG + AR++FD + +R+ V+WNS+I NG A D
Sbjct: 354 YVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAED 413
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
A+ ++ RM ++P+ +T +++AC + GL+ + + ++ +V
Sbjct: 414 AIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIV 473
Query: 296 DMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVV 351
D++ + G+L +A RM + NVV +++S +V+ A L K+LE N
Sbjct: 474 DLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSG 533
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESV 381
++ L Y G +EAL + +L+K + V
Sbjct: 534 NYVILSNIYASAGRWQEALKVRKLMKDKRV 563
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 348/651 (53%), Gaps = 71/651 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C ++ + +HA +I+ F S++ + N LI +Y KCG
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG------------- 247
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I +A LF MP+RD+ SWN+M+SG+ ++ E L F
Sbjct: 248 ------------------DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSM 289
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + + SAC + ++G VH + KS + D+ M ++LI MY GR
Sbjct: 290 MRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF M +++VSW ++I + A+E + M GI PDE+TL SV+SA
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA + G+++H ++ L + +++ N+L+DMY+KC +CV + + +
Sbjct: 410 CACIGHLDLGIRLHEIAIKT-GLVSHVIVSNSLIDMYSKC------KCVDNALEV----- 457
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F + +NVVSW +LI G N + EAL FR +K ES+
Sbjct: 458 --------------------FRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESM 496
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T ++L+ACA + L G++ H H ++ G+ F D F+ N+++DMY++CG
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF------DGFLPNAILDMYVRCGR 550
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
F + ++D +WN ++ G AQ G A+ LF KML PD +T I +LCA
Sbjct: 551 KVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS +G+V EG +YF+ M ++ L P HY C+VD+LGRAG LD+A I+ MP++PDA
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL AC++HRN+ LGE AK++ E + + G Y+LL N+YA G W +V +VR LMR
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+RG+ PGCSW+EI G V+ F+ D H +KEI VL +MK G+
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 224/450 (49%), Gaps = 43/450 (9%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G++V+ L+S S+ V +G+AL+ M+ + G + A VF M ER++ SWN L+ Y +
Sbjct: 116 GSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAK 175
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL ++ RM+ + I P+ T SV+ CA ++ G +IHA ++R +D+
Sbjct: 176 AGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRF-GFESDVD 234
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNAL+ MY KCG ++ AR +FD+MP R+ +S +M+S
Sbjct: 235 VGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMIS---------------------- 272
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
GY +NG E L LF +++ SV P T + +AC L + +LGR H
Sbjct: 273 ---------GYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+VVK S DI + NSLI MY G +E+ +F M +D VSW AMI
Sbjct: 324 YVVK------SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+ +A+ +K M L G PD +T++ VL AC+ G ++ G + ++ + GL
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVI 436
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
++D+ + C+D A + + + + V W SL+ +++ +++ E
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSFEALLFFRQMKES 495
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
NS V L ++ + R G ++R +++
Sbjct: 496 MKPNS---VTLISVLSACARIGALMRGKEI 522
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 357/674 (52%), Gaps = 68/674 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFI-QNRLIDVYAKCGCLYGARKVFDKM 80
+ +LL SC + R+ + ++K F S I I N L+ +Y++ G + AR +FD+M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL---- 136
++N F+WN++I G + G + R F MPERD SWN +VSGFA+ S A
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 137 ---------------GYFVKMHSE---------NFALSEYSFGSALSACAGSVDFKMGTQ 172
GY + ++E NF+ + + L ACA K G Q
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGK-------------------------------CGR 201
+HA + D M S+L+++Y K CGR
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V+ +R +FD R ++ WNS+I+ Y N +AL +F M E D TLA+V++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINA 327
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + G Q+H + L +D+V+ + L+DMY+KCG EA +F + + +
Sbjct: 328 CIGLGFLETGKQMHCHACKF-GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM+ Y + A+ +F ++ ++++SWN++ G++QNG E L F + + +
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ ++++ACA+++ L+LG Q GL +SD V +SLID+Y KCG
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGL------DSDQVVSSSLIDLYCKCGF 500
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE G R+F+TMV+ D V WN+MI G A NG G EA+ LFKKM + G +P +T + VL A
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C++ GLVEEGRK F SM +HG P K+H++CMVDLL RAG ++EA L+E MP D
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W S+L C + +G+ A+K++E+EP NS YV LS ++A G W VRKLMR
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 622 KRGVVKQPGCSWIE 635
+ V K PG SW +
Sbjct: 681 ENNVTKNPGSSWTD 694
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 234/488 (47%), Gaps = 72/488 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +L +C +++ +++HA+I+ + + + L++VYAKCG L A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ + + +++I+G G ++++ LF R WNSM+SG+ ++ EAL
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +E S + + ++AC G + G Q+H K D+ + S L+DMY
Sbjct: 306 LFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 198 K-------------------------------CGRVSCARRVFDGMRERNIVSWNSLITC 226
K CGR+ A+RVF+ + ++++SWNS+
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+ QNG + LE F +M + DEV+L+SV+SACAS+++ + G Q+ AR L +
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATIVGLDS 483
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D V+ ++L+D+Y KCG + R VFD M + V SM+SGYA
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA---------------- 527
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG+ EA+ LF+ + + PT TF +L AC ++ GR+
Sbjct: 528 ---------------TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 407 AHTHV-VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
+ V HG F+ +E + ++D+ + G VE+ + E M + D W++++
Sbjct: 573 LFESMKVDHG--FVPDKEH----FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 465 VGCAQNGY 472
GC NGY
Sbjct: 627 RGCVANGY 634
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 11/370 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A ++++C+ + +++H K +I + + L+D+Y+KCG A K+F
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + + NS+I G IDDA R+F + + SWNSM +GF+Q+ E L
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
YF +MH + E S S +SACA ++G QV A + SD + S+LID+Y
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V RRVFD M + + V WNS+I+ Y NG +A+++F +M +GI P ++T
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC +EG ++ + D + +VD+ A+ G + EA + + MP
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLER-------NVVSWNALIAGYTQNGENEEAL 370
+ SM S + + M K E+ N V++ L A + +G+ E +
Sbjct: 617 ---VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESS- 672
Query: 371 GLFRLLKRES 380
L R L RE+
Sbjct: 673 ALVRKLMREN 682
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/633 (35%), Positives = 358/633 (56%), Gaps = 42/633 (6%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYG 72
+F+ +P +L+ C KS+ +++ A+++ + F +RL+ A + L
Sbjct: 53 SFVRENPLLSILERC---KSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDY 109
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
++ ++ NVF+WN+ I G ++ G I+ L+ M ++ G + D
Sbjct: 110 CTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRM----------LLGGTLKPDN- 158
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+++ L C G +G V + K + D+++ +A
Sbjct: 159 -------------------HTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNAS 199
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I M CG +S A VF+ R R++V+WNS+IT + G A +A++++ M A + P+E
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T+ ++S+C+ + G + H + + L + L NAL+DMY KCG+L AR +FD
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M + +VS T+MV GYA+ + AR + K+ E++VV WNA+I+G Q + +EAL L
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F ++ ++ P T N L+AC+ L L +G H ++ +H L D+ +G +L
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSI------DVALGTAL 432
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCG++ ++FE + +R+ ++W A+I G A +G +AL F KM+ G PD
Sbjct: 433 VDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDE 492
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +GVL AC H GLVEEGRKYFS MS + ++P HY+CMVDLLGRAG L+EA+ L++
Sbjct: 493 ITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVK 552
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM DA + G+L AC+V+ N+ +GE A KLLEI+P +SG YVLL++MY+E W E
Sbjct: 553 NMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKE 612
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
RKLM +GV K PGCS +EI G V+ F++
Sbjct: 613 ARSARKLMNDKGVEKTPGCSLVEINGIVHEFVL 645
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 171/375 (45%), Gaps = 63/375 (16%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ ++G D+ + LL C S V ++K F +IF+ N I + C
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G L A VF+K +++ TWNS+ITG +K G +A +++
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYK------------------ 248
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+M +E +E + +S+C+ D +G + H + + +
Sbjct: 249 -------------EMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP 295
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG---------------- 231
+ +AL+DMY KCG + AR +FD M ++ +VSW +++ Y + G
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 232 ---------------PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+AL +F M IEPD+VT+ + +SAC+ L A G+ IH
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH 415
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ R KL D+ LG ALVDMYAKCG + A VF+ +P RN ++ T+++ G A + +
Sbjct: 416 YIER-HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ 474
Query: 337 SARLMFTKMLERNVV 351
A F+KM+ +V
Sbjct: 475 DALSYFSKMIHIGIV 489
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 362/661 (54%), Gaps = 77/661 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L+ +C +S + ++VH ++K F S+++++N LI+ ++ C
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVC---------- 261
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
SN + DA R+F D SWNS+++G+ + EA
Sbjct: 262 ---SN------------------MTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKH 300
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ H + +S +S+ ++I ++G
Sbjct: 301 IY----------------------------------HQMPERSIIASN-----SMIVLFG 321
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
G V A ++FD M E+++V+W++LI C++QN +A+ FV M G+ DEV S
Sbjct: 322 MRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVS 381
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA+L G IH+ ++ + + L NAL+ MY+KCG + AR +FD +
Sbjct: 382 ALSACANLLVVNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLL 440
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++S SM+SGY K + V +A+ +F M E++VVSW+++I+GY QN +E L LF+ ++
Sbjct: 441 DLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQ 500
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
P T ++++ACA LA L+ G+ H ++ ++GL ++ +G +LIDMYM
Sbjct: 501 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI------NVILGTTLIDMYM 554
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG VE +F M+E+ +WNA+I+G A NG +L +F M C P+ +T +G
Sbjct: 555 KCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMG 614
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC H GLV+EG+ +F SM +H + P HY CMVDLLGRAG L EA+ L+ MPM
Sbjct: 615 VLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT 674
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD WG+LL ACK H + +G V +KL+E++P + G +VLLSN+YA G+W +V+ +R
Sbjct: 675 PDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIR 734
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+M K V+K PGCS IE G ++ F+ DK HP I +L + ++K GY P+ +
Sbjct: 735 GMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDIN 794
Query: 678 D 678
+
Sbjct: 795 E 795
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 189/397 (47%), Gaps = 59/397 (14%)
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q A ++ M+++ + D T ++ AC+ + E Q+H +++ +
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKL-GFDS 246
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ + N L++ ++ C + +A VF+ + + VS S+++GY + +V+ A+ ++ +M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 347 ERNVVS-------------------------------WNALIAGYTQNGENEEALGLFRL 375
ER++++ W+ALIA + QN EEA+ F
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG----------LRFLSGEESD 425
+ + V + L+ACANL + +G+ H+ +K G L ++ + D
Sbjct: 367 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGD 426
Query: 426 IFVG---------------NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
I V NS+I Y+KC V++ IF++M E+D VSW++MI G AQN
Sbjct: 427 IMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQN 486
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
E L LF++M + G KPD T++ V+ AC+ +E+G K+ + K +GL
Sbjct: 487 DLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVIL 545
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
T ++D+ + GC++ A + M ++ W +L+
Sbjct: 546 GTTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 34/300 (11%)
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIA--GYTQNGENEEALGLFRLLKRESVCPTHYTF 388
K+ SV L+ + + N A + Y Q A L++ + + +YT+
Sbjct: 157 KSRSVNKGFLLLMRYPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTY 216
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L+ AC+ +Q H HV+K G +SD++V N+LI+ + C ++ D CR+
Sbjct: 217 PLLIQACSIRRSEWEAKQVHNHVLKLGF------DSDVYVRNTLINCFSVCSNMTDACRV 270
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH--VTMIGVLCACSHAG 506
F D VSWN+++ G + G EA ++ +M P+ + ++ G
Sbjct: 271 FNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM------PERSIIASNSMIVLFGMRG 324
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA-KTLI--EAMPMQPDAVIW 563
LV E K F M ++ + ++ ++ + +EA +T + + + D V+
Sbjct: 325 LVVEACKLFDEMLEKDMVT-----WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVA 379
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN----MYAELGRWGEVVRVRKL 619
S L+AC + +G+ + L+I + Y+ L N MY+ + G+++ RKL
Sbjct: 380 VSALSACANLLVVNMGKLIHSLSLKI---GTESYINLQNALIYMYS---KCGDIMVARKL 433
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 329/590 (55%), Gaps = 11/590 (1%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
++ L G A +LF ++P+ D + ++++S F +EA+ + + +
Sbjct: 72 LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
F + AC S D +VH + SD ++G+ALI YGKC V ARRVFD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+ +++VSW S+ +CY G L VF M +G++P+ VTL+S++ AC+ L K
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKS 251
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G IH +R + N V +ALV +YA+C + +AR VFD MP R+VVS +++ Y
Sbjct: 252 GRAIHGFAVRHGMIENVFVC-SALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310
Query: 331 KASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+F++M +E + +WNA+I G +NG+ E+A+ + R ++ P
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T + L AC+ L L++G++ H +V +H L D+ +L+ MY KCG +
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLI------GDLTTMTALVYMYAKCGDLNLSR 424
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F+ + +D V+WN MI+ A +G G E L LF+ ML G KP+ VT GVL CSH+
Sbjct: 425 NVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSR 484
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVEEG + F+SM ++H + P +HY CMVD+ RAG L EA I+ MPM+P A WG+L
Sbjct: 485 LVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGAL 544
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L AC+V++N+ L + A KL EIEP+N G YV L N+ W E R LM++RG+
Sbjct: 545 LGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGIT 604
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K PGCSW+++ V+ F+V DK + + +IY L L +MK GY P+
Sbjct: 605 KTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDT 654
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 199/407 (48%), Gaps = 27/407 (6%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S + +L +C K + R +H ++ +F+ + L+ +YA+C + AR VF
Sbjct: 232 NSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVF 291
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D M +++V +WN ++T D LF+ M E D+ +WN+++ G ++ +
Sbjct: 292 DLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTE 351
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A+ KM + F ++ + S L AC+ +MG +VH + + D+ +AL+
Sbjct: 352 KAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALV 411
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KCG ++ +R VFD + +++V+WN++I +G + L +F M+ SGI+P+ V
Sbjct: 412 YMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSV 471
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T V+S C+ +EGLQI + R + D +VD++++ G+L+EA R
Sbjct: 472 TFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQR 531
Query: 314 MPIRNVVSETSMVSGYAKA-SSVKSARLMFTKMLE------RNVVS-WNALIAGYTQNGE 365
MP+ S + G + +V+ A++ K+ E N VS +N L+ +
Sbjct: 532 MPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEA 591
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
+E + L+K + T + LQ+G + HT VV
Sbjct: 592 SEARI----LMKERGITKT-----------PGCSWLQVGDRVHTFVV 623
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 181/400 (45%), Gaps = 71/400 (17%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+S F + +C S S + VH I+ S+ F+ N LI Y KC C+ GAR+VFD
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ K+V +W S+ + + G +F M WN
Sbjct: 192 DLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM------GWNG----------------- 228
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
VK +S + S L AC+ D K G +H + +V++ SAL+ +Y +
Sbjct: 229 -VKPNS-------VTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYAR 280
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCY------------------------------- 227
C V AR VFD M R++VSWN ++T Y
Sbjct: 281 CLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAV 340
Query: 228 ----EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+NG A+E+ +M G +P+++T++S + AC+ L + + G ++H + R
Sbjct: 341 IGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFR-HW 399
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L DL ALV MYAKCG LN +R VFD + ++VV+ +M+ A + + L+F
Sbjct: 400 LIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFE 459
Query: 344 KMLER----NVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
ML+ N V++ +++G + + EE L +F + R+
Sbjct: 460 SMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 75/424 (17%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++G L+ G A+++FD + + + + ++LI+ + G ++A+ ++ + A
Sbjct: 67 HLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRAR 126
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
GI+P +V AC + ++H +RC + +D LGNAL+ Y KC +
Sbjct: 127 GIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRC-GMMSDAFLGNALIHAYGKCKCVEG 185
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR VFD + +++VVS TSM S Y + +F +M WN
Sbjct: 186 ARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM------GWNG----------- 228
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
V P T ++L AC+ L DL+ GR H V+HG+ ++
Sbjct: 229 --------------VKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMI------ENV 268
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS--------------------------- 459
FV ++L+ +Y +C SV+ +F+ M RD VS
Sbjct: 269 FVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328
Query: 460 --------WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
WNA+I GC +NG +A+ + +KM G KP+ +T+ L ACS + G
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMG 388
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++ + + H L T +V + + G L+ ++ + + M + D V W +++ A
Sbjct: 389 KEVHCYVFR-HWLIGDLTTMTALVYMYAKCGDLNLSRNVFD-MICRKDVVAWNTMIIANA 446
Query: 572 VHRN 575
+H N
Sbjct: 447 MHGN 450
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 317/581 (54%), Gaps = 59/581 (10%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY--SFGSALSACAGSVDFKMGTQVHAL 176
W + A F +A+ F++M + S S +AL +CA +G +HAL
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 177 LSKSRYSSDVYMGSALIDMY-------------------GKCGRVSCARRVFDGMRERNI 217
+S +D + +AL+++Y G R+VFD M ER++
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWN+L+ + G +AL +M G PD TL++V+ A A K GL++H
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
R +D+ +G++L+DMYA C + + + VFD +P+R+ +
Sbjct: 196 AFR-NGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHIL---------------- 238
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
WN+L+AG QNG EEALG+FR + + V P TF +L+ C N
Sbjct: 239 ---------------WNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGN 283
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
LA L+ G+Q H +V+ G E ++F+ +SLIDMY KCG + IF+ M D
Sbjct: 284 LASLRFGKQLHAYVI------CGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDV 337
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSW AMI+G A +G EAL LF++M L KP+H+T + VL ACSHAGLV++G KYF S
Sbjct: 338 VSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKS 397
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
MS +G+ P +H+ + D LGRAG LDEA I M ++P A +W +LL AC+VH+N M
Sbjct: 398 MSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTM 457
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L E VAKK++E+EP + G +V+LSNMY+ GRW E +R+ MRK+G+ K P CSWIE+
Sbjct: 458 LAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVK 517
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
++VF+ D+ HP I L + +M R G+VPN D
Sbjct: 518 SKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTED 558
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 194/372 (52%), Gaps = 30/372 (8%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLY---GARKVFDKMSNKNVFTWNSIITGLLK 97
+HA I+S ++ F N L+++Y K C Y + D + F
Sbjct: 72 LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAF----------- 120
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+ ++F M ERD SWN++V G A+ R EALG+ KM E F ++ +
Sbjct: 121 ----ESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTV 176
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L A D K G +VH ++ + SDV++GS+LIDMY C R + +VFD + R+
Sbjct: 177 LPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDH 236
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+ WNSL+ QNG +AL +F RM+ +G+ P VT +S++ C +LA+ + G Q+HA
Sbjct: 237 ILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAY 296
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ C +++ + ++L+DMY KCG+++ A C+FD+M +VVS T+M+ GYA +
Sbjct: 297 VI-CGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPARE 355
Query: 338 ARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A ++F +M + N +++ A++ + G ++ F+ + HY L
Sbjct: 356 ALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMS------NHYGIVPTLE 409
Query: 394 ACANLADLQLGR 405
A LAD LGR
Sbjct: 410 HFAALAD-TLGR 420
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 133/289 (46%), Gaps = 34/289 (11%)
Query: 36 SDTRR---VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
+D +R VH ++ F S++F+ + LID+YA C + KVFD + ++ WNS++
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLL 243
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY 152
G AQ+ EALG F +M
Sbjct: 244 AGC-------------------------------AQNGSVEEALGIFRRMLQAGVRPVPV 272
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F S + C + G Q+HA + + +V++ S+LIDMY KCG +S A +FD M
Sbjct: 273 TFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKM 332
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
++VSW ++I Y +GPA +AL +F RM +P+ +T +V++AC+ +G
Sbjct: 333 SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGW 392
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ + + L AL D + G+L+EA +M I+ S
Sbjct: 393 KYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTAS 441
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 47/247 (19%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ L+ C S+ +++HA +I F +FI + LID+Y KCG + A +FDKMS
Sbjct: 274 FSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS 333
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +V +W +M+ G+A H EAL F +
Sbjct: 334 SPDVVSW-------------------------------TAMIMGYALHGPAREALVLFER 362
Query: 142 MHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGSALID 194
M N + +F + L+AC AG VD FK + + ++ + +AL D
Sbjct: 363 MELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHF------AALAD 416
Query: 195 MYGKCGRVSCARRVFDGMRERNIVS-WNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
G+ G + A M+ + S W++L+ + A EV ++M +EP +
Sbjct: 417 TLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME--LEPRSI 474
Query: 254 TLASVVS 260
V+S
Sbjct: 475 GSHVVLS 481
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 348/651 (53%), Gaps = 71/651 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C ++ + +HA +I+ F S++ + N LI +Y KCG
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCG------------- 247
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I +A LF MP+RD+ SWN+M+SG+ ++ E L F
Sbjct: 248 ------------------DISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSM 289
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + + SAC + ++G VH + KS + D+ M ++LI MY GR
Sbjct: 290 MRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR 349
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF M +++VSW ++I + A+E + M GI PDE+TL SV+SA
Sbjct: 350 LEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSA 409
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA + G+++H ++ L + +++ N+L+DMY+KC +CV + + +
Sbjct: 410 CACIGHLDLGIRLHEIAIKT-GLVSHVIVSNSLIDMYSKC------KCVDNALEV----- 457
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
F + +NVVSW +LI G N + EAL FR +K ES+
Sbjct: 458 --------------------FRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESM 496
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T ++L+ACA + L G++ H H ++ G+ F D F+ N+++DMY++CG
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGF------DGFLPNAILDMYVRCGR 550
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
F + ++D +WN ++ G AQ G A+ LF KML PD +T I +LCA
Sbjct: 551 KVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS +G+V EG +YF+ M ++ L P HY C+VD+LGRAG LD+A I+ MP++PDA
Sbjct: 610 CSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL AC++HRN+ LGE AK++ E + + G Y+LL N+YA G W +V +VR LMR
Sbjct: 670 IWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMR 729
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+RG+ PGCSW+EI G V+ F+ D H +KEI VL +MK G+
Sbjct: 730 ERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 224/450 (49%), Gaps = 43/450 (9%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G++V+ L+S S+ V +G+AL+ M+ + G + A VF M ER++ SWN L+ Y +
Sbjct: 116 GSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAK 175
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL ++ RM+ + I P+ T SV+ CA ++ G +IHA ++R +D+
Sbjct: 176 AGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRF-GFESDVD 234
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNAL+ MY KCG ++ AR +FD+MP R+ +S +M+S
Sbjct: 235 VGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMIS---------------------- 272
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
GY +NG E L LF +++ SV P T + +AC L + +LGR H
Sbjct: 273 ---------GYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
+VVK S DI + NSLI MY G +E+ +F M +D VSW AMI
Sbjct: 324 YVVK------SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+ +A+ +K M L G PD +T++ VL AC+ G ++ G + ++ + GL
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVI 436
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
++D+ + C+D A + + + + V W SL+ +++ +++ E
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRSFEALLFFRQMKES 495
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
NS V L ++ + R G ++R +++
Sbjct: 496 MKPNS---VTLISVLSACARIGALMRGKEI 522
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/650 (36%), Positives = 350/650 (53%), Gaps = 74/650 (11%)
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD-------ASRLFASMPERDQCSW 119
C L R + KM + N ++ L+++ + A +F S+ E + W
Sbjct: 12 CKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIW 71
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+M G A AL +V M S + Y+F L ACA S F+ G Q+H + K
Sbjct: 72 NTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLK 131
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS-------------------- 219
D+Y+ ++LI MY K GR AR+VFD R++VS
Sbjct: 132 LGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKM 191
Query: 220 -----------WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
WN+LI+ Y + G +ALE+F MM + ++PDE T+ +V+SACA A+
Sbjct: 192 FDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASI 251
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ G Q+H+ + ++L + NAL+D+Y KCG+
Sbjct: 252 ELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGE------------------------- 285
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
V++A +F + ++V+SWN LI GYT +EAL LF+ + R P T
Sbjct: 286 ------VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTM 339
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L ACA+L + +GR H ++ K L G + + SLIDMY KCG +E ++
Sbjct: 340 LSILPACAHLGAIDIGRWIHVYIDKR----LKGVSNPSSLRTSLIDMYAKCGDIEAAQQV 395
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F++M+ R SWNAMI G A +G A +F +M G +PD +T +G+L ACSH+G++
Sbjct: 396 FDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGML 455
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ GR F SM++++ + P +HY CM+DLLG +G EA+ +I +M M PD VIW SLL
Sbjct: 456 DLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLK 515
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
ACK+H N+ LGE A+ L++IEP NSG YVLLSN+YA GRW EV + R L+ +G+ K
Sbjct: 516 ACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKV 575
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
PGCS IEI V+ F++ DK HP N+EIY +L+ + ++ G+VP+ S+
Sbjct: 576 PGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 238/460 (51%), Gaps = 46/460 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL +C +SK+ + +++H ++K ++++ LI +Y K G ARKVF
Sbjct: 102 NSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVF 161
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ S+++V ++ ++I G G+I A ++F +P +D SWN+++SG+A+ + EAL
Sbjct: 162 DQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALE 221
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N E + + LSACA S ++G QVH+ + + S++ + +ALID+Y
Sbjct: 222 LFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI 281
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A +F+G+ ++++SWN+LI Y +AL +F M+ SG P+EVT+ S
Sbjct: 282 KCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLS 341
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + R + + N L +L+DMYAKCG + A+ VFD M
Sbjct: 342 ILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLN 401
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++ S +M+ G+A +G A +F +
Sbjct: 402 RSLSSWNAMIFGFA-------------------------------MHGRANPAFDIFSRM 430
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG----NSL 432
+++ + P TF LL+AC++ L LGR H R ++ E+ I +
Sbjct: 431 RKDGIEPDDITFVGLLSACSHSGMLDLGR--------HIFRSMT-EDYKITPKLEHYGCM 481
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
ID+ G ++ + +M ++ D V W +++ C +G
Sbjct: 482 IDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 250/725 (34%), Positives = 372/725 (51%), Gaps = 124/725 (17%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A L +C S H I + F S +F+ N L+ +Y++ G L A VFD++
Sbjct: 153 PYA--LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEI 210
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ K IDD SWNS+V+ + AL F
Sbjct: 211 TRKG----------------IDDV------------ISWNSIVAAHVKGSNPRTALDLFS 242
Query: 141 KMHS--ENFALSE----YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+M + A +E S + L ACA ++H+ ++ +D ++ +ALID
Sbjct: 243 EMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALID 302
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP---------------------- 232
Y KCG + A VF+ M +++VSWN+++T Y Q+G
Sbjct: 303 TYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVIT 362
Query: 233 -------------ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA-RL 278
+AL+ F +M+ G EP+ VT+ S++SACASL A +G++ HA L
Sbjct: 363 WSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSL 422
Query: 279 MRC----------EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+C + DLV+ NAL+DMY+KC
Sbjct: 423 KKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC--------------------------- 455
Query: 329 YAKASSVKSARLMFTKML--ERNVVSWNALIAGYTQNGENEEALGLFR--LLKRESVCPT 384
S K+AR +F + ERNVV+W +I GY Q G++ +AL LF + K +V P
Sbjct: 456 ----RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPN 511
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
YT +L ACA+L+ L++G+Q H +V +H E S FV N LIDMY KCG V+
Sbjct: 512 AYTISCILMACAHLSSLRMGKQIHAYVTRHH----EYESSVYFVANCLIDMYSKCGDVDT 567
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F++M +R+ VSW +M+ G +G G EAL +F KM G PD ++ + +L ACSH
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+G+V++G YF M ++G+ HY C++DLL R+G LD+A I+ MPM+P A IW
Sbjct: 628 SGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWV 687
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL+AC+VH N+ L EY KL+ ++ N G Y L+SN+YA RW +V R+R+LM+K G
Sbjct: 688 ALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSG 747
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN---ASDDEA 681
+ K+PGCSW++ F V D+ HPL+ EIY +L+ L +K +GYVP A D
Sbjct: 748 IKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVD 807
Query: 682 YEEQN 686
EE+N
Sbjct: 808 DEEKN 812
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 288/582 (49%), Gaps = 42/582 (7%)
Query: 18 DSSP--FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D SP FA LL C +SV+ R++H +II S L+ V
Sbjct: 28 DVSPTHFASLLKEC---RSVNTVRQIHQKIIAYGLLS---YPASLLSVSLP------PLP 75
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+S K++ T ++ L G DA + + WN +V + R A
Sbjct: 76 SHSYVSPKSLGT--GVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRA 133
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+G +M ++ AL AC ++ G+ H L+ + + S+V++ +AL+ M
Sbjct: 134 IGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAM 193
Query: 196 YGKCGRVSCARRVFDGMRER---NIVSWNSLITCYEQNGPASDALEVFVRMM------AS 246
Y + G + A VFD + + +++SWNS++ + + AL++F M A+
Sbjct: 194 YSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKAT 253
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
D +++ +++ ACASL A + +IH+ +R + V NAL+D YAKCG + +
Sbjct: 254 NERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC-NALIDTYAKCGSMKD 312
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN----VVSWNALIAGYTQ 362
A VF+ M ++VVS +MV+GY ++ +A +F M + N V++W+A+IAGY Q
Sbjct: 313 AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL--- 419
G +EAL F+ + P T +LL+ACA+L L G + H + +K L L
Sbjct: 373 RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432
Query: 420 ---SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGYGT 474
G+ D+ V N+LIDMY KC S + IF ++ ER+ V+W MI G AQ G
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 475 EALGLFKKML--LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL-APLKDHY 531
+AL LF +M+ P+ T+ +L AC+H + G++ + +++ H + +
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
C++D+ + G +D A+ + ++MP + + V W S+++ +H
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMH 593
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 348/617 (56%), Gaps = 40/617 (6%)
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+D+ C L+ V+ + + F ++I G +D A +F + +D SW
Sbjct: 149 MDLAHLCWTLHAC--VYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWT 206
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
MV+ +A++ + E+L F +M + + ++ AL +C G F +G VH K
Sbjct: 207 GMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKG 266
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Y D+++G AL+++Y K G + A+R+F+ M + +++ W+ +I Y Q+ + +AL++F
Sbjct: 267 CYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLF 326
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+RM + + P+ T ASV+ ACAS + G QIH+ +++ L +++ + NA++D+YAK
Sbjct: 327 LRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKF-GLNSNVFVSNAIMDVYAK 385
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG++ E SM +F ++ +RN V+WN +I GY
Sbjct: 386 CGEI-----------------ENSMK--------------LFEELPDRNDVTWNTIIVGY 414
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
Q G+ E A+ LF + + PT T+ ++L A A+LA L+ G Q H+ +K +
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIK------T 468
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
D V NSLIDMY KCG + D F+ M +RD VSWNAMI G + +G EAL LF
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
M KP+ +T +GVL ACS+AGL+ +G+ +F SMSK++ + P +HYTCMV LLGR
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
G DEA LI + QP ++W +LL AC +H+ + LG A+ +LE+EP + +VLL
Sbjct: 589 LGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLL 648
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SNMYA GRW V VRK M+K+ V K+PG SW+E G V+ F V D HP K I +L
Sbjct: 649 SNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAML 708
Query: 661 KMLTREMKRVGYVPNAS 677
+ L ++ + GYVP+ +
Sbjct: 709 EWLNKKTRDAGYVPDCN 725
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 134/250 (53%), Gaps = 31/250 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L +C S S+ +++H+ ++K S +F+ N ++DVYAKCG + + K+F+++
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP 400
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++N TWN+II G ++ G + A LF M E D
Sbjct: 401 DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHD-------------------------- 434
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+E ++ S L A A + G Q+H+L K+ Y+ D + ++LIDMY KCGR
Sbjct: 435 -----MQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGR 489
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR FD M +R+ VSWN++I Y +G + +AL +F M + +P+++T V+SA
Sbjct: 490 INDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSA 549
Query: 262 CASLAAFKEG 271
C++ +G
Sbjct: 550 CSNAGLLYKG 559
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 185/423 (43%), Gaps = 41/423 (9%)
Query: 148 ALSEYSFGSALSACA-GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
AL +S+ L D G +H + K S D++ + L++ Y + + A
Sbjct: 31 ALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDAS 90
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
++FD M + N +S+ +L Y ++ AL +R+ G E + +++ S+
Sbjct: 91 KLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSM- 149
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
D+ C L+ CV+ + T+++
Sbjct: 150 -----------------------------DLAHLCWTLHA--CVYKLGHHADAFVGTALI 178
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
Y+ +V AR +F + +++VSW ++A Y +N EE+L LF ++ P ++
Sbjct: 179 DAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T L +C L +G+ H G + D+FVG +L+++Y K G + D
Sbjct: 239 TISGALKSCLGLEAFNVGKSVH------GCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
R+FE M + D + W+ MI AQ+ EAL LF +M P++ T VL AC+ +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
++ G++ S + K GL ++D+ + G ++ + L E +P + D V W ++
Sbjct: 353 SLDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTI 410
Query: 567 LAA 569
+
Sbjct: 411 IVG 413
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/695 (33%), Positives = 373/695 (53%), Gaps = 83/695 (11%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
L++ +S R++ ++ S N +I Y K G L ARK+FD M + TW
Sbjct: 58 LKNGELSQARQLFEKMPHKNTVS----TNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113
Query: 90 SIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFSE---------AL 136
+I G + +A LF M E D ++ +++SG H+ ++ L
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 173
Query: 137 GY----------------------FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
GY ++ E + ++F + L A G D +G Q+H
Sbjct: 174 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIH 233
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ + K+ + +V++ +AL+D Y K V AR++FD M E++ VS+N +I+ Y +G
Sbjct: 234 SFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHK 293
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
A ++F + + + + A+++S ++ ++ G QIHA+ + +++++GN+L
Sbjct: 294 YAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI-VTTADSEILVGNSL 352
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
VDMYAKCGK E A ++FT + R+ V W
Sbjct: 353 VDMYAKCGKFEE-------------------------------AEMIFTNLTHRSAVPWT 381
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I+ Y Q G EE L LF +++ SV TF +LL A A++A L LG+Q H+ ++K
Sbjct: 382 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 441
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G S++F G++L+D+Y KCGS++D + F+ M +R+ VSWNAMI AQNG
Sbjct: 442 GFM------SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAE 495
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
L FK+M+L G +PD V+ +GVL ACSH+GLVEEG +F+SM++ + L P ++HY +
Sbjct: 496 ATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASV 555
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP-SN 593
VD+L R+G +EA+ L+ MP+ PD ++W S+L AC++H+N L A +L +E +
Sbjct: 556 VDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD 615
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
+ PYV +SN+YA G+W V +V K MR RGV K P SW+EI ++F D+ HP
Sbjct: 616 AAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQI 675
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS-----DDEAYE 683
+EI + MLT+ M+ +GY P+ S +DE ++
Sbjct: 676 EEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFK 710
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 226/467 (48%), Gaps = 83/467 (17%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q+ ++ +DS FA +L + + + +++H+ +IK+ F +F+ N L+D Y+K
Sbjct: 200 QLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 259
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ ARK+FD+M PE+D S+N ++SG+A
Sbjct: 260 SVIDARKLFDEM-------------------------------PEQDGVSYNVIISGYAW 288
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ A F ++ F ++ F + LS + ++D++MG Q+HA + S++ +
Sbjct: 289 DGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 348
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G++L+DMY KCG+ A +F + R+ V W ++I+ Y Q G + L++F +M + +
Sbjct: 349 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 408
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
D+ T AS++ A AS+A+ G Q+H+ +++ + N + G+AL+D+YAKCG + +A
Sbjct: 409 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN-VFSGSALLDVYAKCGSIKDAV 467
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
F MP RN+VS +M+S YA QNGE E
Sbjct: 468 QTFQEMPDRNIVSWNAMISAYA-------------------------------QNGEAEA 496
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
L F+ + + P +F +L+AC +H+ +V+ GL + + I+
Sbjct: 497 TLKSFKEMVLSGLQPDSVSFLGVLSAC-----------SHSGLVEEGLWHFNS-MTQIYK 544
Query: 429 GN-------SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ S++DM + G + ++ M ++ D + W++++ C
Sbjct: 545 LDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 591
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 13/233 (5%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQ----IHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
P+ + + +++ ASL + K L I AR+++ D N V + K G+L+
Sbjct: 6 PNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKT-GFDPDTSRSNFRVGNFLKNGELS 64
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+AR +F++MP +N VS M+SGY K+ ++ AR +F M+ER V+W LI GY+Q +
Sbjct: 65 QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQ 124
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+EA LF ++R P + TF LL+ C Q T ++K G +S
Sbjct: 125 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY------DSR 178
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ VGN+L+D Y K ++ C++F+ M E D ++ A++ CA G LG
Sbjct: 179 LIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL--CANIGLDDIVLG 229
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 121/309 (39%), Gaps = 79/309 (25%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA LL + S+S +++H+ IIKS F S +F + L+DVYAKCG + A + F
Sbjct: 411 DQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTF 470
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M ++N+ +W N+M+S +AQ+ L
Sbjct: 471 QEMPDRNIVSW-------------------------------NAMISAYAQNGEAEATLK 499
Query: 138 YFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMGS 190
F +M SF LSAC+ G F TQ++ L + + + V
Sbjct: 500 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASV---- 555
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+DM + GR + A ++ M I+P
Sbjct: 556 --VDMLCRSGRFNEAEKL----------------------------------MAEMPIDP 579
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DE+ +SV++AC + + +L E+LR+ N + ++YA G+ V
Sbjct: 580 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN-MSNIYAAAGQWENVSKV 638
Query: 311 FDRMPIRNV 319
M R V
Sbjct: 639 HKAMRDRGV 647
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/677 (35%), Positives = 370/677 (54%), Gaps = 68/677 (10%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
T R+++++ D D+ F L SC +S+ D R+H ++ S+ + + N L++
Sbjct: 129 TLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLN 188
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KCG L A++VF KM R+ SW+ M
Sbjct: 189 MYKKCGSLSHAKRVFAKMERT------------------------------RNVISWSIM 218
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
A H EAL +F M ++ + + LSAC+ + G +H+ ++ S +
Sbjct: 219 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGF 278
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRE--RNIVSWNSLITCYEQNGPASDALEVF 240
S++ + +A++ MYG+CG V AR+VFD M E R++VSWN +++ Y N DA++++
Sbjct: 279 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLY 338
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
RM + D+VT S++SAC+S G +H +++ ++L ++++GNALV MYAK
Sbjct: 339 QRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALVSMYAK 394
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG EAR VFD+M R+++S T+++S Y + V A +F +MLE
Sbjct: 395 CGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE------------L 442
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+NG ++ V P F +LNACA+++ L+ G+ GL
Sbjct: 443 EKNGSSQR------------VKPDALAFVTILNACADVSALEQGKMVSEQAASCGL---- 486
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEALGL 479
SD VG +++++Y KCG +E+G RIF+ + R V WNAMI AQ G EAL L
Sbjct: 487 --SSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKL 544
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH-GLAPLKDHYTCMVDLL 538
F +M + G +PD + + +L ACSH GL ++G+ YF+SM+ E+ + H+ C+ DLL
Sbjct: 545 FWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLL 604
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GR G L EA+ +E +P++PDAV W SLLAAC+ HR++ + VA KLL +EP + YV
Sbjct: 605 GRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 664
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LSN+YAEL +W V +VRK M ++GV K+ G S IEI +++ F D HP N+EI
Sbjct: 665 ALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIRE 724
Query: 659 VLKMLTREMKRVGYVPN 675
L L +MK GYVP+
Sbjct: 725 ELAKLHSQMKECGYVPD 741
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 223/494 (45%), Gaps = 86/494 (17%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDG 211
++ L CA + G ++H+L K ++ +G+ ++ MY C A+ FD
Sbjct: 45 TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+ +RN+ SW L+ + +G + + L RM G+ PD VT + + +C + ++G
Sbjct: 105 LEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSETSMVSGYA 330
++IH +++ +L D + NAL++MY KCG L+ A+ VF +M RNV+S + M +A
Sbjct: 165 IRIH-QMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHA 223
Query: 331 KASSVKSARLMFTKML---------------------------------------ERNVV 351
+V A F ML E ++
Sbjct: 224 LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELL 283
Query: 352 SWNALIAGYTQNGENEEALGLF------------------------------RLLKRESV 381
NA++ Y + G EEA +F +L +R +
Sbjct: 284 VANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQL 343
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T+ +LL+AC++ D+ LGR H +V L E ++ VGN+L+ MY KCGS
Sbjct: 344 RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDEL------EKNVIVGNALVSMYAKCGS 397
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-------KPDHVT 494
+ +F+ M +R +SW +I + EA LF++ML + KPD +
Sbjct: 398 HTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALA 457
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +L AC+ +E+G K S + GL+ K T +V+L G+ G ++E + + + +
Sbjct: 458 FVTILNACADVSALEQG-KMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGV 516
Query: 555 PMQPDAVIWGSLLA 568
+PD +W +++A
Sbjct: 517 CSRPDVQLWNAMIA 530
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/693 (33%), Positives = 369/693 (53%), Gaps = 76/693 (10%)
Query: 26 LDSCLRSK--SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
L CL S S+S R+ HA I++ S+ + L+ YA
Sbjct: 5 LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYA------------------ 46
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N + ++ L L + +P S++S++ FA+ F L F +H
Sbjct: 47 NALSLSTPQLSL----------TLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLH 96
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ SA+ +CA G Q+HA + S + +D + S+L MY KC R+
Sbjct: 97 PLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRIL 156
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV---------- 253
AR++FD M +R++V W+++I Y + G +A E+F M + G+EP+ V
Sbjct: 157 DARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFG 216
Query: 254 -------------------------TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
T++ V+ A L G Q+H +++ + L +D
Sbjct: 217 NNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIK-QGLGSDK 275
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM--- 345
+ +A++DMY KCG + E VFD + + S + ++G ++ V +A +F K
Sbjct: 276 FVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQ 335
Query: 346 -LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+E NVV+W ++IA +QNG++ EAL LFR ++ V P T +L+ AC N++ L G
Sbjct: 336 KMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHG 395
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
++ H ++ G+ D++VG++LIDMY KCG ++ R F+ M + VSWNA++
Sbjct: 396 KEIHCFSLRRGIF------DDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVM 449
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A +G E + +F ML G+KPD VT VL AC+ GL EEG + ++SMS+EHG+
Sbjct: 450 KGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGI 509
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
P +HY C+V LL R G L+EA ++I+ MP +PDA +WG+LL++C+VH N+ LGE A+
Sbjct: 510 EPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAE 569
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
KL +EP+N G Y+LLSN+YA G W E R+R++M+ +G+ K PG SWIE+ V++ +
Sbjct: 570 KLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLL 629
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D+ HP K+I L L +MK+ GY+P +
Sbjct: 630 AGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTN 662
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ +C ++ + +H ++ ++++ + LID+YAKCG + AR+ FDKMS N
Sbjct: 382 LIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALN 441
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQ 116
+ +WN+++ G G + +F M + Q
Sbjct: 442 LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ 473
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 310/528 (58%), Gaps = 42/528 (7%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D++ +AL+ Y K G + + FD M R+ VS+N+ I + N ++LE+F RM
Sbjct: 88 DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G EP E T+ S+++A A L+ + G QIH ++ L N + + NAL DMYAKCG++
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGN-VFIWNALTDMYAKCGEI 206
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASS------------------------------ 334
+AR +FD + +N+VS M+SGYAK
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAY 266
Query: 335 -----VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
V AR +F++ E+++V W A++ GY +NG E+AL LF + E + P YT
Sbjct: 267 CQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLS 326
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+++++CA LA L G+ H G L+G +++ V ++LIDMY KCG ++D +F
Sbjct: 327 SVVSSCAKLASLHHGQAVH------GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
M R+ VSWNAMIVGCAQNG+ +AL LF+ ML KPD+VT IG+L AC H +E
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G++YF S++ +HG+ P DHY CMV+LLGR G +++A LI+ M PD +IW +LL+
Sbjct: 441 QGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C +I+ E A+ L E++P+ + PY++LSNMYA +GRW +V VR LM+ + V K
Sbjct: 501 CSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFA 560
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
G SWIEI V+ F +D+ HP +++IY L ML +++ G+ PN +
Sbjct: 561 GFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTN 608
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 253/495 (51%), Gaps = 53/495 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVF 77
S + +L+ C+R+ ++ +R+ + + F ++ F+ N+L+ +YAK G L A+ +F
Sbjct: 22 SEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM +++F+WN++++ K G I + F MP RD S+N+ ++GF+ + E+L
Sbjct: 82 DKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E F +EY+ S L+A A D + G Q+H + + +V++ +AL DMY
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYA 201
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR +FD + ++N+VSWN +I+ Y +NG + + +M SG PD+VT+++
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMST 261
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++A E AR + E D+V A++ YAK G+ +A +F+ M +
Sbjct: 262 IIAAYCQCGRVDE-----ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 318 ---------------------------------------NVVSETSMVSGYAKASSVKSA 338
N++ ++++ Y+K + A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F M RNVVSWNA+I G QNG +++AL LF + ++ P + TF +L+AC +
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 399 ADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERD 456
++ G++ + +HG+ D + ++++ + G +E + + M + D
Sbjct: 437 NWIEQGQEYFDSITNQHGMT----PTLDHYA--CMVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 457 WVSWNAMIVGCAQNG 471
++ W+ ++ C+ G
Sbjct: 491 FLIWSTLLSICSTKG 505
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 193/344 (56%), Gaps = 15/344 (4%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D L N L+ +YAK GKL +A+ +FD+M R++ S +++S YAK+ S+++ + F +M
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
R+ VS+N IAG++ N +E+L LF+ ++RE PT YT ++LNA A L+DL+ G+Q
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H ++ +R G ++F+ N+L DMY KCG +E +F+ + +++ VSWN MI G
Sbjct: 177 IHGSII---VRNFLG---NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A+NG + +GL +M L G PD VTM ++ A G V+E R+ FS ++ +
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC- 289
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYV- 582
+T M+ + G ++A L M ++PD+ S++++C ++ G+ V
Sbjct: 290 ----WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
K +L +N L +MY++ G + V LM R VV
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++ SC + S+ + VH + I + + + + + LID+Y+KCG + AR VF
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
+ M +NV +WN++I G + G DA LF +M ++ D ++ ++S +
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 134 EALGYF---VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+ YF H L Y+ L G ++ Q AL+ + D + S
Sbjct: 441 QGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIE-----QAVALIKNMAHDPDFLIWS 495
Query: 191 ALIDMYGKCGRV----SCARRVFD 210
L+ + G + AR +F+
Sbjct: 496 TLLSICSTKGDIVNAEVAARHLFE 519
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/591 (37%), Positives = 328/591 (55%), Gaps = 58/591 (9%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQV 173
SW + A F A+ F++M + + A + S AL +CA +G +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 174 HALLSKSRYSSDVYMGSALIDMY--------------GKCGRVSCARRVFDGMRERNIVS 219
HAL +S +D + +AL+++Y G + R+VFD M E+++VS
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN+L+ ++G +AL + M G +PD TL+SV+ A A + G+++H
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
R +D+ +G++L+DMYA C + + + VFD +P+R+
Sbjct: 201 R-NGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA-------------------- 239
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+ WN+++AG QNG +EALGLFR + + P TF +L+ AC NLA
Sbjct: 240 -----------ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLA 288
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L LG+Q H +V++ G + ++F+ +SLIDMY KCG+V RIF+ + D VS
Sbjct: 289 SLLLGKQLHAYVIRGGF------DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVS 342
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W AMI+G A +G EAL LF +M L KP+H+T + VL ACSHAGLV++G KYF+SMS
Sbjct: 343 WTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMS 402
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+G+ P +H+ + D LGR G L+EA I M ++P A +W +LL ACKVH+N +L
Sbjct: 403 DHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLA 462
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E VAKK+ ++EP + G +++LSN Y+ GRW E +RK MRK+G+ K+P CSWIE+
Sbjct: 463 EEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNK 522
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD--DEAYEEQNGS 688
+VF+ DK HP + I L + + +M R GYVPN D + EEQ S
Sbjct: 523 QHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNS 573
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 197/385 (51%), Gaps = 32/385 (8%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA ++S ++ F N L+++Y K L +M V
Sbjct: 80 LHALALRSGAFADRFAANALLNLYCK---LPAPPSHSPEMDGSAVV-------------- 122
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ ++F MPE+D SWN++V G A+ R EALG +M + ++ S L
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A D + G ++H +++ + DV++GS+LIDMY C R + +VFD + R+ + W
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS++ QNG +AL +F RM+ SGI+P VT +S++ AC +LA+ G Q+HA ++R
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
++ + ++L+DMY KCG ++ AR +FDR+ ++VS T+M+ G+A + A +
Sbjct: 303 -GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALV 361
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+F +M L+ N +++ A++ + G ++ F + HY L A
Sbjct: 362 LFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMS------DHYGIVPSLEHHA 415
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSG 421
LAD LGR ++ F+SG
Sbjct: 416 ALAD-TLGRPGK---LEEAYNFISG 436
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 139/289 (48%), Gaps = 34/289 (11%)
Query: 36 SDTRR---VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
+D RR +H ++ F ++F+ + LID+YA C + KVFD
Sbjct: 187 ADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFD-------------- 232
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY 152
++P RD WNSM++G AQ+ EALG F +M
Sbjct: 233 -----------------NLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPV 275
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F S + AC +G Q+HA + + + +V++ S+LIDMY KCG VS ARR+FD +
Sbjct: 276 TFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRI 335
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ +IVSW ++I + +GPA +AL +F RM ++P+ +T +V++AC+ +G
Sbjct: 336 QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGW 395
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ + + L AL D + GKL EA M I+ S
Sbjct: 396 KYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTAS 444
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 35/206 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ L+ +C S+ +++HA +I+ F +FI + LID+Y KCG + AR++FD++
Sbjct: 277 FSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQ 336
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ ++ +W +M+ G A H EAL F +
Sbjct: 337 SPDIVSW-------------------------------TAMIMGHALHGPAREALVLFDR 365
Query: 142 MHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M N + +F + L+AC AG VD K +++ + +AL D G+
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVD-KGWKYFNSMSDHYGIVPSLEHHAALADTLGRP 424
Query: 200 GRVSCARRVFDGMRERNIVS-WNSLI 224
G++ A GM+ + S W++L+
Sbjct: 425 GKLEEAYNFISGMKIKPTASVWSTLL 450
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 311/527 (59%), Gaps = 43/527 (8%)
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M K F+WN+I+TG K G + A +F +P+RD SW +M+ G+ Q RF A+ F
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V M + ++++ + ++CA +G ++H+ + K S V + ++L++MY K
Sbjct: 61 VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120
Query: 200 GRVSCARRVFDGMR-------------------------------ERNIVSWNSLITCYE 228
G A+ VFD MR ER++V+WNS+IT Y
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q+G +ALE+F RM+ ++PD TLAS++SACA++ G QIH+ ++R E
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTE-FDISG 239
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMVSGYAKASSVKSARLMFTKML 346
V+ NAL+ MYAK G + A+ + ++ I NV++ T+++ GY K ++ AR +F +
Sbjct: 240 VVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLK 299
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+ +VV+W A+I GY QNG N++A+ LFR++ +E P +T +L+ +N+A L G+Q
Sbjct: 300 DSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQ 359
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER--DWVSWNAMI 464
H ++ SGE + VGN+LI MY K GS+ D ++F +++R D VSW +MI
Sbjct: 360 IHASAIR------SGENLSVSVGNALITMYAKAGSITDAQQVFN-LIQRNKDTVSWTSMI 412
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
+ Q+G G E++ LF+KML G KPDH+T +GVL AC+H GLVE+GR YF+ M+ H +
Sbjct: 413 IALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKI 472
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
P HY CM+DL GRAG L EA + IE MP++PD + WGSLL++CK
Sbjct: 473 EPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 219/415 (52%), Gaps = 49/415 (11%)
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G ++ A VFD + +R+ VSW ++I Y Q G A+++FV MM + P + T+
Sbjct: 16 YAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVLPTQFTV 75
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+V ++CA+L A G +IH+ +++ L + + N+L++MYAK G A+ VFDRM
Sbjct: 76 TNVFASCAALGALDIGKKIHSFVIKL-GLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMR 134
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+R++ S M+S + A F +M ER+VV+WN++I GY+Q+G ++EAL LF
Sbjct: 135 LRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSR 194
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI--FVGNSLI 433
+ +S+ P +T ++L+ACAN+ +L LG+Q H+++++ E DI V N+LI
Sbjct: 195 MLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIR--------TEFDISGVVQNALI 246
Query: 434 DMYMKCGSVE-----------------------DGC----------RIFETMVERDWVSW 460
MY K G VE DG IF+++ + D V+W
Sbjct: 247 SMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAW 306
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM-- 518
AMIVG QNG +A+ LF+ M G +P+ T+ +L S+ + G++ +S
Sbjct: 307 TAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIR 366
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
S E+ + + ++ + +AG + +A+ + + D V W S++ A H
Sbjct: 367 SGENLSVSVGN---ALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQH 418
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 233/480 (48%), Gaps = 82/480 (17%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
SC ++ +++H+ +IK + + + N L+++YAK G A+ VFD+M +++ +
Sbjct: 81 SCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISS 140
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
WN +I+ + G D A F M ERD +WNSM++G++QH EAL F +M ++
Sbjct: 141 WNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSL 200
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC-------- 199
++ S LSACA + +G Q+H+ + ++ + + +ALI MY K
Sbjct: 201 KPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQS 260
Query: 200 -------------------------GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
G ++ AR +FD +++ ++V+W ++I Y QNG
Sbjct: 261 IVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLND 320
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNA 293
DA+E+F M G P+ TLA+++S +++A+ G QIHA +R E L + +GNA
Sbjct: 321 DAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENL--SVSVGNA 378
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+ MYAK G + +A+ VF+ + RN ++ VSW
Sbjct: 379 LITMYAKAGSITDAQQVFNLIQ-RN-----------------------------KDTVSW 408
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR-----QAH 408
++I Q+G +E++ LF + + P H T+ +L+AC ++ ++ GR
Sbjct: 409 TSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTS 468
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
H ++ L + +ID++ + G +++ E M +E D ++W +++ C
Sbjct: 469 IHKIEPTLSHYA----------CMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSC 518
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 172/314 (54%), Gaps = 4/314 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C ++++ +++H+ II+++F +QN LI +YAK G + A+ +
Sbjct: 203 DRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIV 262
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ +S+ NV + +++ G +K G I A +F S+ + D +W +M+ G+ Q+ +A
Sbjct: 263 EQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDA 322
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M E + ++ + LS + G Q+HA +S + V +G+ALI M
Sbjct: 323 MELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITM 382
Query: 196 YGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ A++VF+ + R ++ VSW S+I Q+G +++E+F +M+A GI+PD +T
Sbjct: 383 YAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHIT 442
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V+SAC + ++G + K+ L ++D++ + G L EA + M
Sbjct: 443 YVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAFSFIENM 502
Query: 315 PIR-NVVSETSMVS 327
PI +V++ S++S
Sbjct: 503 PIEPDVIAWGSLLS 516
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 336/606 (55%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F S+ E +Q SWN+M+ G A AL +V M S + + Y+F +CA
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S + G Q+HA + K + D+++ ++LI MY + G V A +VFD R++VS
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
WN++I+ Y + G +ALE+F MM ++PDE
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+A+V+S C + G QIH+ + ++L L NAL+D+Y+KCG++ A +F+
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHS-WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ ++ V+SWN LI GY ++EAL +
Sbjct: 270 GLQYKD-------------------------------VISWNTLIGGYAYINHHKEALLV 298
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + + P T ++L ACA+L + +GR H ++ K L G ++ + SL
Sbjct: 299 FQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK----LKGIITNTSLQTSL 354
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG++E ++F+T++ + S NAMI G A +G A L +M G +PD
Sbjct: 355 IDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDD 414
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSHAGL + GRK F SM+ ++ + P +HY CM+DLLGR+G EA+ LI
Sbjct: 415 ITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELIN 474
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
+M M+PD VIWGSLL ACK+H+N+ LGE +A+KL++IEP N G YVLLSN+YA RW +
Sbjct: 475 SMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDD 534
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V RVR L+ +G+ K PGCS IEI V+ F++ DK HP NKEIY +L+ + + G+
Sbjct: 535 VARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGF 594
Query: 673 VPNASD 678
V + S+
Sbjct: 595 VSDTSE 600
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 235/452 (51%), Gaps = 38/452 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F L SC +SK+ + +++HA+I+K ++ + LI +YA+ G + A KVF
Sbjct: 77 NSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVF 136
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S+++V ++ ++ITG G +D A ++F +P +D SWN+M+SG+A+ R+ EAL
Sbjct: 137 DTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALE 196
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + E + + LS C S + ++G Q+H+ + + S++ + +ALID+Y
Sbjct: 197 LFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYS 256
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F+G++ ++++SWN+LI Y +AL VF M+ G P++VT+ S
Sbjct: 257 KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + + + + + L +L+DMYAKCG + A VFD
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFD---- 372
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+L +++ S NA+I G+ +G + A L +
Sbjct: 373 ---------------------------TILNKSLSSCNAMIFGFAMHGRADAAFDLLSRM 405
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
K++ + P TF LL+AC++ LGR+ + + E + +ID+
Sbjct: 406 KKDGIEPDDITFVGLLSACSHAGLSDLGRK-----IFKSMTLDYRIEPKLEHYGCMIDLL 460
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G ++ + +M +E D V W +++ C
Sbjct: 461 GRSGLFKEAEELINSMTMEPDGVIWGSLLKAC 492
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/708 (34%), Positives = 373/708 (52%), Gaps = 79/708 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+ ARI+K+ F N +I ++ G L AR++ D+M N+N F+ + II+G +K G
Sbjct: 30 IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ A R+F ER +W +M+ +++ +RF +A F +MH ++ + L+
Sbjct: 90 LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C K Q HA + K + + + + L+D Y K G + ARR+F M + VS+
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSF 209
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N +IT Y NG +A+E+FV M G +P + T A+V+SA L G QIH +++
Sbjct: 210 NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVK 269
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA-- 338
+RN + +GNA +D Y+K +NE R +F+ MP + VS +++ YA VK +
Sbjct: 270 TSFIRN-VFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESID 328
Query: 339 ---RLMFTKMLERN--------------------------VVSW--------NALIAGYT 361
L FT +N VVS N+L+ Y
Sbjct: 329 LFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYA 388
Query: 362 QNGENEEA-------------------------------LGLFRLLKRESVCPTHYTFGN 390
+ G+ EEA L LF ++R +V TF
Sbjct: 389 KCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFAC 448
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L A ANLA + LG+Q H+ V++ G +++ G +L+DMY C S++D + FE
Sbjct: 449 VLKASANLASILLGKQLHSCVIRSGFM-------NVYSGCALLDMYANCASIKDAIKTFE 501
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M ER+ V+WNA++ AQNG G L F++M++ G +PD V+ + +L ACSH LVEE
Sbjct: 502 EMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEE 561
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G KYF+ MS + LAP ++HYT MVD L R+G DEA+ L+ MP +PD ++W S+L +C
Sbjct: 562 GLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSC 621
Query: 571 KVHRNIMLGEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
++H+N L A +L ++ ++ PYV +SN++AE G+W VV+V+K MR RGV K P
Sbjct: 622 RIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLP 681
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+EI V+VF D +HP EI ++ML +M++ GY P+ S
Sbjct: 682 AYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDIS 729
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 41/368 (11%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L S + R++HA+++ S + + N L+D+YAKCG A ++F ++
Sbjct: 344 PFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRL 403
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S+++ W ++I+ ++ G ++ +L F
Sbjct: 404 SSRSTVPWTAMISANVQRGLHENGLKL-------------------------------FY 432
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M N + + +F L A A +G Q+H+ + +S + +VY G AL+DMY C
Sbjct: 433 EMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCA 491
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A + F+ M ERN+V+WN+L++ Y QNG L+ F M+ SG +PD V+ +++
Sbjct: 492 SIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILT 551
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--- 317
AC+ +EGL+ + L A+VD + G+ +EA + +MP
Sbjct: 552 ACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDE 611
Query: 318 ----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+V++ + YA A K+A +F + R+ + + + + G+ + + +
Sbjct: 612 IVWTSVLNSCRIHKNYALAR--KAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVK 669
Query: 374 RLLKRESV 381
+ ++ V
Sbjct: 670 KAMRDRGV 677
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 316/522 (60%), Gaps = 9/522 (1%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L ACA +G ++H + K+ + + LI+MYGKCG + A +F+ + R+
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+SW S++T Q L +F M G++PD A +V ACA L A K+G Q+HA
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ + +D V+ ++LVDMYAKCG + R VFD + +N +S T+M+SGYA++
Sbjct: 130 TFI-VSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKL 188
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNLLNAC 395
A +F KM +N++SW ALI+G Q+G ++ LF ++ + + + +++ A
Sbjct: 189 DAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGAS 248
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
ANLA L LG+Q H V+ L G ES +FV N+L+DMY KC V +IF MV+R
Sbjct: 249 ANLAVLGLGKQIHCLVI------LLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW ++IVG AQ+G EAL L+ +ML G KP+ VT +G++ ACSH GLV +GR +F
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFF 362
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+SM K++G+ P HYTC++DLL R+G L+EA+ LI+AMP +PD W +LL+AC HRN
Sbjct: 363 NSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRN 422
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
++G VA LL ++P + Y+LLSN+YA W V +VR+LM V K+PG S I
Sbjct: 423 TLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIV 482
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ VF+ + HP +EI+ +L+ L EMK+ GY+P+ S
Sbjct: 483 LGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTS 524
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 168/301 (55%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA L+ +C ++ ++VHA I S + + +++ L+D+YAKCG R VF
Sbjct: 104 DHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVF 163
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +S+KN +W ++I+G + G DA +LF MP ++ SW +++SG Q + ++
Sbjct: 164 DSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFY 223
Query: 138 YFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F++M S+ + + + S + A A +G Q+H L+ Y S +++ +AL+DMY
Sbjct: 224 LFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMY 283
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC V A+++F M +R+IVSW S+I Q+G A +AL ++ RM+++G++P+EVT
Sbjct: 284 AKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFV 343
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC+ + +G +++ + L L+D+ ++ G L EA + MP
Sbjct: 344 GLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPF 403
Query: 317 R 317
+
Sbjct: 404 K 404
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/549 (24%), Positives = 231/549 (42%), Gaps = 115/549 (20%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C R +S +++H IIK+ + N LI++Y KCG + A +F+++ +++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+W SI+T + +F +M ++D
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQD------------------------------ 99
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
Y F + ACA K G QVHA S S D + S+L+DMY KCG
Sbjct: 100 GLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIG 159
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALE--------------------------- 238
R VFD + +N +SW ++I+ Y Q+G DA++
Sbjct: 160 RVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWV 219
Query: 239 ----VFVRMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+F+ M + GI+ D L+S++ A A+LA G QIH L+ + L + NA
Sbjct: 220 DSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHC-LVILLGYESSLFVSNA 278
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
LVDMYAKC + A+ +F RM R++VS TS++ G A
Sbjct: 279 LVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTA----------------------- 315
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
Q+G EEAL L+ + + P TF L+ AC+++ + GR ++K
Sbjct: 316 --------QHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK 367
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGY 472
G + L+D+ + G +E+ + + M + D +W A++ C N +
Sbjct: 368 D-----YGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSAC--NHH 420
Query: 473 GTEALGLFKKMLLCGEKPD----HVTMIGVLCACSHAGLVEEGRKYFSSM--SKEHGLAP 526
+G+ L KP+ ++ + + + + V + R+ ++M KE G
Sbjct: 421 RNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPG--- 477
Query: 527 LKDHYTCMV 535
Y+C+V
Sbjct: 478 ----YSCIV 482
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 247/717 (34%), Positives = 369/717 (51%), Gaps = 126/717 (17%)
Query: 39 RRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
R +H R+++ + + N L+ +Y++CG + AR VFD M GL
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMR------------GL-- 113
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
RD SW +M S A++ E+L +M + Y+ +
Sbjct: 114 ----------------RDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAV 157
Query: 158 LSAC------------AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
AC + KMG + +D+ +GSALIDM + G ++ A
Sbjct: 158 AHACFPHELYCLVGGVVLGLVHKMGL----------WGTDIAVGSALIDMLARNGDLASA 207
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VFDG+ E+ +V W LI+ Y Q A +A+E+F+ + G EPD T++S++SAC L
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTEL 267
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG---KLNEARCVFDRMPIRNVVSE 322
+ + GLQ+H+ +R +D + LVDMYAK ++ A VF+RM +V+S
Sbjct: 268 GSVRLGLQLHSLALRM-GFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISW 326
Query: 323 TSMVSGYAKASSVKSARLM--FTKMLERNV----VSW----------------------- 353
T+++SGY + S V+ ++M F +ML ++ +++
Sbjct: 327 TALISGYVQ-SGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHV 385
Query: 354 ------------NALIAGYTQNGENEEALGLFRLLKRESV--CPTH-------------- 385
NAL++ Y ++G EEA +F L S+ C T
Sbjct: 386 IKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMD 445
Query: 386 -----YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
TF +L++A A++ L G+Q H +K G SD FV NSL+ MY +CG
Sbjct: 446 MGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGF------GSDRFVSNSLVSMYSRCG 499
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ED CR F + +R+ +SW +MI G A++GY AL LF M+L G KP+ VT I VL
Sbjct: 500 YLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLS 559
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH GLV EG++YF SM ++HGL P +HY CMVDLL R+G + EA I MP++ DA
Sbjct: 560 ACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADA 619
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++W +LL AC+ H NI +GE AK ++E+EP + PYVLLSN+YA+ G W EV R+R M
Sbjct: 620 LVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAM 679
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R + K+ G SW+E+ + F D HP ++IY L L E+K +GYVP+ S
Sbjct: 680 RDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTS 736
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 169/364 (46%), Gaps = 64/364 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG---CLYGAR 74
D + ++ +C SV ++H+ ++ FAS+ + L+D+YAK + A
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYAN 312
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFI--------------------------------- 101
KVF++M +V +W ++I+G ++ G
Sbjct: 313 KVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANI 372
Query: 102 ---DDASRLFASMPERDQCS----WNSMVSGFAQHDRFSEALGYFVKMHSE--------- 145
D ++ A + + +Q + N++VS +A+ EA F +++
Sbjct: 373 SDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISCITEG 432
Query: 146 ------------NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ +S +F S +SA A G Q+HA+ K+ + SD ++ ++L+
Sbjct: 433 RDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLV 492
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +CG + A R F+ +++RN++SW S+I+ ++G A AL +F M+ +G++P++V
Sbjct: 493 SMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDV 552
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +V+SAC+ + +EG + + R L + +VD+ A+ G + EA +
Sbjct: 553 TYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINE 612
Query: 314 MPIR 317
MP++
Sbjct: 613 MPLK 616
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 59/95 (62%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ SS FA L+ + ++ +++HA +K+ F S+ F+ N L+ +Y++CG L A +
Sbjct: 448 ISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRS 507
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
F+++ ++NV +W S+I+GL K G+ + A LF M
Sbjct: 508 FNELKDRNVISWTSMISGLAKHGYAERALSLFHDM 542
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 327/541 (60%), Gaps = 41/541 (7%)
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
++ +N A + + L C G +HALL SR+ D+ M + L+++Y K
Sbjct: 3 LIRQQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAK 62
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + AR++FD M R++V+W +LIT Y Q+ DAL + M+ G++P++ TLAS+
Sbjct: 63 CGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASL 122
Query: 259 VSACASLAAFK--EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ A + + + +G Q+H +R +++ + A++DMYA+C L E
Sbjct: 123 LKAASGVGSTDVLQGRQLHGLCLR-YGYDSNVYVSCAILDMYARCHHLEE---------- 171
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
A+L+F M+ +N VSWNALIAGY + G+ ++A LF +
Sbjct: 172 ---------------------AQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNM 210
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
RE+V PTH+T+ ++L ACA++ L+ G+ H ++K G + ++ FVGN+L+DMY
Sbjct: 211 LRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVA------FVGNTLLDMY 264
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
K GS+ED ++F+ + +RD VSWN+M+ G +Q+G G AL F++ML P+ +T +
Sbjct: 265 AKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFL 324
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL ACSHAGL++EGR YF M K++ + P HY MVDLLGRAG LD A I MP+
Sbjct: 325 CVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPI 383
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P A +WG+LL AC++H+N+ LG Y A+ + E++ G +VLL N+YA GRW + +V
Sbjct: 384 KPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV 443
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RK+M++ GV K+P CSW+E+ V+VF+ D HP +EI+ + + ++ ++K +GYVP++
Sbjct: 444 RKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDS 503
Query: 677 S 677
S
Sbjct: 504 S 504
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 212/405 (52%), Gaps = 55/405 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL C +++ + +HA ++ S+F ++ +QN L+++YAKCG L ARK+FD+
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDE----- 75
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
M RD +W ++++G++QHDR +AL +M
Sbjct: 76 --------------------------MSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR 109
Query: 145 ENFALSEYSFGSALSACAG--SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
++++ S L A +G S D G Q+H L + Y S+VY+ A++DMY +C +
Sbjct: 110 IGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHL 169
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A+ +FD M +N VSWN+LI Y + G A +F M+ ++P T +SV+ AC
Sbjct: 170 EEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCAC 229
Query: 263 ASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
AS+ + ++G +HA +++ EKL +GN L+DMYAK G + +A+ VFDR+ R+VVS
Sbjct: 230 ASMGSLEQGKWVHALMIKWGEKLVA--FVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVS 287
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRLLK 377
SM++GY++ K A F +ML N +++ ++ + G +E F ++K
Sbjct: 288 WNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK 347
Query: 378 RESVCP--THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+ +V P +HY + DL LGR H + ++F+S
Sbjct: 348 KYNVEPQISHYV---------TMVDL-LGRAGH---LDRAIQFIS 379
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 32/286 (11%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSI 91
S V R++H ++ + S +++ ++D+YA+C L A+ +FD M +KN
Sbjct: 131 STDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKN------- 183
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
+ SWN++++G+A+ + +A F M EN +
Sbjct: 184 ------------------------EVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTH 219
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+++ S L ACA + G VHAL+ K ++G+ L+DMY K G + A++VFD
Sbjct: 220 FTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDR 279
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+ +R++VSWNS++T Y Q+G AL+ F M+ + I P+++T V++AC+ EG
Sbjct: 280 LAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEG 339
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ +M+ + + +VD+ + G L+ A MPI+
Sbjct: 340 RH-YFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIK 384
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C S+ + VHA +IK F+ N L+D+YAK G + A+KVFD+++
Sbjct: 222 YSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA 281
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +WNS++T G++QH AL F +
Sbjct: 282 KRDVVSWNSMLT-------------------------------GYSQHGLGKVALQRFEE 310
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M A ++ +F L+AC+ + G ++ K + ++D+ G+ G
Sbjct: 311 MLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGH 370
Query: 202 VSCARRVFDGMRERNIVS-WNSLI 224
+ A + M + + W +L+
Sbjct: 371 LDRAIQFISEMPIKPTAAVWGALL 394
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/663 (35%), Positives = 351/663 (52%), Gaps = 76/663 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L + S ++ ++H ++K F S+ + N LID+YAKCG L A +VF
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVF---- 62
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
MPER+ SW +++ GF +H E L
Sbjct: 63 ---------------------------GGMPERNVVSWTALMVGFLRHGDARECLRLLGA 95
Query: 142 MHS-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + A +E++ ++L AC D G +H ++ + + ++L+ +Y K G
Sbjct: 96 MRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGG 155
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-----PDEVTL 255
R+ ARRVFDG RN+V+WN++I+ Y G D+L VF M E PDE T
Sbjct: 156 RIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTF 215
Query: 256 ASVVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS++ AC SL A +EG Q+HA + +R ++ +L AL+DMY KC RC+ +
Sbjct: 216 ASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKC------RCL---L 266
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P+ A +F ++ ++N + W +I G+ Q G+ +EA+ LF
Sbjct: 267 PM---------------------AMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
V + +++ A+ A ++ GRQ H + VK + D+ V NSLID
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVK------TPAGLDVSVANSLID 359
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG ++ R F + R+ VSW AMI G ++G+G EA+ +F++M G +PD V
Sbjct: 360 MYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVA 419
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +L ACSH+GLVEE R+YFS++ + L P +HY CMVDLLGRAG L EAK L+ M
Sbjct: 420 YLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATM 479
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PM P +W +LL+AC+VH+N+ +G + LL I+ N YV+LSN++AE G W E
Sbjct: 480 PMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQ 539
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFM-VKDKRHPLNKEIYLVLKMLTREMK-RVGY 672
RVR MR+RG+ KQ GCSW+E+ + F D HP +I VL+ + R M+ R+GY
Sbjct: 540 RVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGY 599
Query: 673 VPN 675
P
Sbjct: 600 SPG 602
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/644 (36%), Positives = 363/644 (56%), Gaps = 36/644 (5%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ P LL C ++ +D +VHARIIK+ + + ++I + K
Sbjct: 14 TPPTLLLLRHC---ETQNDVNQVHARIIKTGYLKNSSLTTKII-----LNSISSPHKPLV 65
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ + FT ++ R+ + + D WN+++ ++ + AL
Sbjct: 66 EFARYVFFTRYAV-------------QRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVL 112
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F M F + ++SF L ACA + G Q+H LL K S++++ + LI MY +
Sbjct: 113 FCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLR 172
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + AR+VFD M ++ VS+NS+I Y ++G A E+F M ++ L S
Sbjct: 173 CGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSM-----PLEDKNLISW 227
Query: 259 VSACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
S A K+G+ + L EK+ DLV N ++ +AKCG++ A +F+RMP R
Sbjct: 228 NSMLGGFAQTKDGIGLALELF--EKMPERDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKR 285
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V+S ++M+ GYAK +K AR +F +M +++VV++N ++AGY QNG EAL +F ++
Sbjct: 286 DVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQ 345
Query: 378 RES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R+S + P T L+A + L ++ H + +++G+ ++G+ V +LIDMY
Sbjct: 346 RQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFLENGIS-VTGK-----VAVALIDMY 399
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+E+ IF+ + ++ WNAMI G A+NG G A G+ +M KPD +T I
Sbjct: 400 SKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFI 459
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC+HAGLV+EG F M K H L P HY CMVD+LG+AG ++ A IE MP+
Sbjct: 460 GVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMVDILGKAGLVEGALKFIEEMPI 519
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P+ +IW +LL+AC+ H N +GE +AK L+ ++ NS YVLLSN+YA LG W +V
Sbjct: 520 EPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSCNSSSYVLLSNIYARLGLWSAASKV 579
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
R +M+K+ + K PGCSWIE+ G V+ F+V+DK HP EIY VL
Sbjct: 580 RMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVL 623
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 229/469 (48%), Gaps = 70/469 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L +C R V + +++H ++K + S +F+ N LI +Y +CG + AR+V
Sbjct: 123 VDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQV 182
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ--CSWNSMVSGFAQ-HDRFS 133
FD+M ++ ++NS+I G +K G ID A LF SMP D+ SWNSM+ GFAQ D
Sbjct: 183 FDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIG 242
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
AL F KM + +S + + C G ++F H+L ++ DV S +I
Sbjct: 243 LALELFEKMPERDL-VSWNTIIGGFAKC-GRIEF-----AHSLFNRMP-KRDVISWSNMI 294
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDE 252
D Y K G + AR +FD M ++++V++N+++ Y QNG ++ALE+F M S + PDE
Sbjct: 295 DGYAKLGDIKVARTLFDEMPDKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDE 354
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL-VLGN---ALVDMYAKCGKLNEAR 308
TL +SA + L ++ +H L N + V G AL+DMY+KCG + A
Sbjct: 355 TTLVVALSAISQLGHVEKAASMHNYF-----LENGISVTGKVAVALIDMYSKCGSIENAI 409
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD + ++ + WNA+I+G +NG +
Sbjct: 410 LIFDGVD-------------------------------QKGIDHWNAMISGMARNGLGKL 438
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL------RFLSGE 422
A G+ + R SV P TF +LNAC AH +VK GL R +
Sbjct: 439 AFGMLLEMHRLSVKPDGITFIGVLNAC-----------AHAGLVKEGLICFELMRKVHKL 487
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQN 470
E + ++D+ K G VE + E M +E + + W ++ C +
Sbjct: 488 EPKLQHYGCMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNH 536
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/600 (38%), Positives = 337/600 (56%), Gaps = 46/600 (7%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENF-ALSEYSFGSALSACAG 163
RL P C +N ++ F +AL F++M H+ + +++ AL +C+
Sbjct: 74 RLGPRPPLSTPC-YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSR 132
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+G V A K +D ++ S+LI MY CG V+ AR VFD E +V WN++
Sbjct: 133 MCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAI 192
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y +NG + +E+F M+ G+ DEVTL SVV+AC + K G + + E
Sbjct: 193 VAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDE-EG 251
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L + L AL+DMYAKCG++ + AR +F
Sbjct: 252 LARNPKLVTALMDMYAKCGEIGK-------------------------------ARRLFD 280
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
M R+VV+W+A+I+GYTQ + EALGLF ++ V P T ++L+ACA L L+
Sbjct: 281 GMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALET 340
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H++V + L + +G +L+D Y KCG ++D FE+M ++ +W A+
Sbjct: 341 GKWVHSYVRRKRLSLTT------ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 394
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G A NG G EAL LF M G +P VT IGVL ACSH+ LVEEGR++F SM++++G
Sbjct: 395 IKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYG 454
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P +HY CMVDLLGRAG +DEA I MP++P+AVIW +LL++C VHRN+ +GE
Sbjct: 455 IKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
K+++ + PS+SG YVLLSN+YA G+W + VRK M+ RG+ K PGCS IE+ G V F
Sbjct: 515 KQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEF 574
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
+D HP +EIY ++ + +K GYVPN +D +E +E + S+ + I F
Sbjct: 575 FAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAF 634
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 216/470 (45%), Gaps = 84/470 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L SC R ++ R V A +K ++ F+ + LI +YA CG + AR VF
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D V WN+I+ LK G W +V
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNG------------------DWMEVVE------------- 207
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M A E + S ++AC D K+G V + + + + + +AL+DMY
Sbjct: 208 MFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYA 267
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + ARR+FDGM+ R++V+W+++I+ Y Q +AL +F M + +EP++VT+ S
Sbjct: 268 KCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVS 327
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SACA L A + G +H+ + R ++L +LG ALVD YAKCG +++A F+ MP++
Sbjct: 328 VLSACAVLGALETGKWVHSYVRR-KRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N + T+++ G A NG EAL LF ++
Sbjct: 387 NSWTWTALIKGMA-------------------------------TNGRGREALELFSSMR 415
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------NS 431
+ PT TF +L AC +H+ +V+ G R D +
Sbjct: 416 EAGIEPTDVTFIGVLMAC-----------SHSCLVEEGRRHFDSMARDYGIKPRVEHYGC 464
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQN---GYGTEAL 477
++D+ + G V++ + TM +E + V W A++ CA + G G EAL
Sbjct: 465 MVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 349/618 (56%), Gaps = 40/618 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M ++V ++ +++ L+K G + DA L+
Sbjct: 145 AASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQ 204
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M++GF ++ +ALG F +M S + +E + S + AC G+ +F +
Sbjct: 205 CPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLA 264
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ L KS DV +AL+D+Y +
Sbjct: 265 MSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAE 324
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +L+ +EQ G A +A+ ++ +M+A G P+ +SV
Sbjct: 325 LGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSV 384
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACASL + G +IH + ++ N++ + +AL+DMY KC +L +A+ +F +P +N
Sbjct: 385 LGACASLQDLRSGRKIHNQTLKM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S++SGY+ S + A +F KM RNV SWN++I+GY QN + +AL F +
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACA+L L++G+ H ++K G++ IFVG +L DMY K
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIK------ESIFVGTALSDMYAK 557
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M +R+ V+W AMI G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 558 SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAI 617
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH+GLVE YF M + G++P HYTCMVD+L RAG L EA+ L+ + +
Sbjct: 618 LFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS 676
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++RN +GE AK+L E++ N+ YVLLSNMYA G+W + +R
Sbjct: 677 EANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRI 736
Query: 619 LMRKRGVVKQPGCSWIEI 636
LM+ + K GCSW++I
Sbjct: 737 LMKGINLKKDGGCSWVQI 754
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 167/304 (54%), Gaps = 9/304 (2%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R++H + +K ++ +F+ + LID+Y KC
Sbjct: 368 QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK 427
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A+ +F + KN+ WNS+I+G + +A LF MP R+ SWNS++SG+AQ
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + + E +F S L ACA +MG VHA + K +++
Sbjct: 488 NRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFV 547
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++RVF M +RN V+W ++I +NG A +++ +F M+++GI
Sbjct: 548 GTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHA----RLMRCEKLRNDLVLGNALVDMYAKCGKL 304
P+E T +++ AC+ GL HA +M+ + +VD+ A+ G L
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 305 NEAR 308
EA
Sbjct: 663 AEAE 666
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 347/658 (52%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S FA +L C + ++H + + + N L+ +Y+KC CL ARK+F
Sbjct: 158 NSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLF 217
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + P+ D SWN ++SG+ Q+ EA
Sbjct: 218 D-------------------------------TSPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S +F S L + K ++H + + DV++ SALID+Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC V A+++ + V ++I+ Y NG +ALE F ++ ++P VT +S
Sbjct: 307 KCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ A A LAA G ++H +++ KL +G+A++DMYAKCG+L+ A VF+R+
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIK-TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT-- 423
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
E++ + WN++I +QNG EA+ LFR +
Sbjct: 424 -----------------------------EKDAICWNSMITSCSQNGRPGEAINLFRQMG 454
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E + L+ACANL L G++ H ++K LR SD++ +SLIDMY
Sbjct: 455 MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR------SDLYAESSLIDMYA 508
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ R+F+ M ER+ VSWN++I +G E L LF +ML G +PDHVT +G
Sbjct: 509 KCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
++ AC HAG V+EG +Y+ M++E+G+ +HY C+ D+ GRAG LDEA I +MP
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFP 628
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA +WG+LL AC +H N+ L E +K L +++P NSG YVLL+N+ A G+W +V++VR
Sbjct: 629 PDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVR 688
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+M++RGV K PG SWIE+ ++F+ D HPL +IY VL L E+K+ GYVP
Sbjct: 689 SIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQ 746
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 275/562 (48%), Gaps = 77/562 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C KSV + VH + ++F+ + LI +YA+ G L
Sbjct: 57 DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHL------- 109
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA LF ++P++D WN M++G+ ++ A+
Sbjct: 110 ------------------------SDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + +F LS CA +GTQ+H + D + + L+ MY
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYS 205
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + AR++FD + ++VSWN +I+ Y QNG +A +F M+++GI+PD +T AS
Sbjct: 206 KCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFAS 265
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ L + K +IH ++R + D+ L +AL+D+Y KC + A+ + +
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIR-HAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSF 324
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V T+M+S GY NG+N+EAL FR L
Sbjct: 325 DTVVCTTMIS-------------------------------GYVLNGKNKEALEAFRWLV 353
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E + PT TF ++ A A LA L LG++ H ++K L + VG++++DMY
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL------DEKCHVGSAILDMYA 407
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ CR+F + E+D + WN+MI C+QNG EA+ LF++M + G + D V++ G
Sbjct: 408 KCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISG 467
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLK-DHY--TCMVDLLGRAGCLDEAKTLIEAM 554
L AC++ + G++ M K PL+ D Y + ++D+ + G L+ ++ + + M
Sbjct: 468 ALSACANLPALHYGKEIHGLMIK----GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM 523
Query: 555 PMQPDAVIWGSLLAACKVHRNI 576
+ + V W S+++A H ++
Sbjct: 524 -QERNEVSWNSIISAYGNHGDL 544
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 229/476 (48%), Gaps = 42/476 (8%)
Query: 96 LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFG 155
++ G + DA LF ++ +WN M+ GF +F+ AL +++KM + +Y+F
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ AC G KMG VH ++ DV++GS+LI +Y + G +S A+ +FD + ++
Sbjct: 63 YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ V WN ++ Y +NG + +A+++F+ M S I+P+ VT A V+S CAS A G Q+H
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C L D + N L+ MY+KC L AR +FD P ++VS ++SG
Sbjct: 183 GIAVSC-GLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISG------- 234
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
Y QNG EA LFR + + P TF + L
Sbjct: 235 ------------------------YVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
L L+ ++ H ++++H + D+F+ ++LID+Y KC VE +I
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVL------DVFLKSALIDIYFKCRDVEMAQKILCQSSSF 324
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V MI G NG EAL F+ ++ KP VT + A + + G++
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384
Query: 516 SSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
S+ K K H + ++D+ + G LD A + + + DA+ W S++ +C
Sbjct: 385 GSIIKTK--LDEKCHVGSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSMITSC 437
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 38/305 (12%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + G + A+ +F ++ +WN +I + G + AL +++M+ +G+ PD+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
VV AC L + K G +H + L+ D+ +G++L+ +YA+ G L++A+ +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ++ V M++GY K NG++ A+ +F
Sbjct: 120 PQKDSVLWNVMLNGYVK-------------------------------NGDSGNAIKIFL 148
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ + P TF +L+ CA+ A L LG Q H V GL E D V N+L+
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGL------ELDSPVANTLLA 202
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KC ++ ++F+T + D VSWN +I G QNG EA LF+ M+ G KPD +T
Sbjct: 203 MYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSIT 262
Query: 495 MIGVL 499
L
Sbjct: 263 FASFL 267
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y + S+K A+ +F + +WN +I G+T G+ AL + + V P YTF
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++ AC L +++G+ H V GL+ D+FVG+SLI +Y + G + D +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLK------EDVFVGSSLIKLYAENGHLSDAQYL 115
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + ++D V WN M+ G +NG A+ +F +M KP+ VT VL C+ ++
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ G + ++ GL ++ + + CL A+ L + P Q D V W +++
Sbjct: 176 DLGTQ-LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSP-QSDLVSWNGIIS 233
Query: 569 ACKVHRNIMLGE 580
+N ++GE
Sbjct: 234 G--YVQNGLMGE 243
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY++ GS++D +F T+ +WN MI G G AL + KML G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLI 551
V+ AC V+ G+ +++ L LK+ + ++ L G L +A+ L
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVN----LMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ +P Q D+V+W N+ML YV
Sbjct: 117 DNIP-QKDSVLW-----------NVMLNGYV 135
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 349/618 (56%), Gaps = 40/618 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M ++V ++ +++ L+K G + DA L+
Sbjct: 145 AASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQ 204
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M++GF ++ +ALG F +M S + +E + S + AC G+ +F +
Sbjct: 205 CPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLA 264
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ L KS DV +AL+D+Y +
Sbjct: 265 MSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAE 324
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +L+ +EQ G A +A+ ++ +M+A G P+ +SV
Sbjct: 325 LGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSV 384
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACASL + G +IH + ++ N++ + +AL+DMY KC +L +A+ +F +P +N
Sbjct: 385 LGACASLQDLRSGRKIHNQTLKM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S++SGY+ S + A +F KM RNV SWN++I+GY QN + +AL F +
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACA+L L++G+ H ++K G++ IFVG +L DMY K
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIK------ESIFVGTALSDMYAK 557
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M +R+ V+W AMI G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 558 SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAI 617
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH+GLVE YF M + G++P HYTCMVD+L RAG L EA+ L+ + +
Sbjct: 618 LFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS 676
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++RN +GE AK+L E++ N+ YVLLSNMYA G+W + +R
Sbjct: 677 EANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRI 736
Query: 619 LMRKRGVVKQPGCSWIEI 636
LM+ + K GCSW++I
Sbjct: 737 LMKGINLKKDGGCSWVQI 754
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 167/304 (54%), Gaps = 9/304 (2%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R++H + +K ++ +F+ + LID+Y KC
Sbjct: 368 QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK 427
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A+ +F + KN+ WNS+I+G + +A LF MP R+ SWNS++SG+AQ
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + + E +F S L ACA +MG VHA + K +++
Sbjct: 488 NRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFV 547
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++RVF M +RN V+W ++I +NG A +++ +F M+++GI
Sbjct: 548 GTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHA----RLMRCEKLRNDLVLGNALVDMYAKCGKL 304
P+E T +++ AC+ GL HA +M+ + +VD+ A+ G L
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 305 NEAR 308
EA
Sbjct: 663 AEAE 666
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/656 (35%), Positives = 358/656 (54%), Gaps = 62/656 (9%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF-IDDASRLFASMPERDQ 116
N +I YA+ G + A +VFD+M + ++N++IT ++K + A LF +PE++
Sbjct: 85 NAMISAYAENGKMSKAWQVFDEMPVRATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNA 144
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMH-------SENFALSEYSFGSALSACAGSVDFKM 169
S+ +M++GF + RF EA + + + N LS Y ++
Sbjct: 145 VSYATMITGFVRAGRFDEAECLYAETPVKFRDPVASNVLLSGY--------------LRV 190
Query: 170 GTQVHAL-LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
G A+ + + +V S+++D Y K GR+ AR +FD M ERN+++W ++I Y
Sbjct: 191 GKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMPERNVITWTAMIDGYF 250
Query: 229 QNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+ G D +F+RM G + + TLA + AC ++EG QIH L R L D
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRM-PLEFD 309
Query: 288 LVLGNALVDMYAKCGKLNEARCVF-------------------------------DRMPI 316
L LGN+L+ MY+K G + EA+ VF ++MP
Sbjct: 310 LFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPG 369
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+++VS T M+ G++ + +F M E++ ++W A+I+ + NG EEAL F +
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R+ VCP YTF ++L+A A+LADL G Q H VVK + +D+ V NSL+ MY
Sbjct: 430 LRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNM------ANDLSVQNSLVSMY 483
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG+ D +IF + E + VS+N MI G + NG+G EA+ LF + G++P+ VT +
Sbjct: 484 CKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFL 543
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L AC H G V+ G KYF SM +G+ P DHY CMVDL GR+G LDEA LI MP
Sbjct: 544 ALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPC 603
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P + +WGSLL+A K H + L E AKKL+E+EP ++ PYV+LS +Y+ +G+ + R+
Sbjct: 604 EPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSMVGKNSDCDRI 663
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+ + + + K PG SWI + G V+ F+ D+ H +EI L M+ EM+ + +
Sbjct: 664 MNIKKSKRIKKDPGSSWIILKGQVHNFLAGDESHLNLEEIAFTLDMIGNEMELITF 719
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 31/330 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++S+ A + +C + ++H + + ++F+ N LI +Y+K G + A+ V
Sbjct: 273 VNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAV 332
Query: 77 FDKMSNKNVFTWNSIITGLLK---------------------W----------GFIDDAS 105
F M K+ +WNS+ITGL++ W G I
Sbjct: 333 FGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
LF MPE+D +W +M+S F + + EAL +F KM + + Y+F S LSA A
Sbjct: 393 ELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLA 452
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
D G Q+H + K ++D+ + ++L+ MY KCG + A ++F + E NIVS+N++I+
Sbjct: 453 DLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS 512
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ NG +A+++F + ++G EP+ VT +++SAC + G + + +
Sbjct: 513 GFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIE 572
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+VD++ + G L+EA + MP
Sbjct: 573 PGPDHYACMVDLFGRSGLLDEAYNLISTMP 602
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 197/471 (41%), Gaps = 129/471 (27%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
R+ + E+ + ++D Y K G + AR +FD+M +NV TW ++I G K GF +D
Sbjct: 198 RVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMPERNVITWTAMIDGYFKAGFFED 257
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
LF M + V+++S A+ AC
Sbjct: 258 GFGLFLRMRQEGD-----------------------VRVNSNTLAV-------MFRACRD 287
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
++ G+Q+H LLS+ D+++G++LI MY K G + A+ VF M+ ++ VSWNSL
Sbjct: 288 FFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSL 347
Query: 224 ITCYEQNGPASDALEVFVRM----------MASGI-----------------EPDEVTLA 256
IT Q S+A E+F +M M G E D++T
Sbjct: 348 ITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWT 407
Query: 257 SVV-----------------------------------SACASLAAFKEGLQIHARLMRC 281
+++ SA ASLA EGLQIH R+++
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ NDL + N+LV MY KCG N+A +F + N+VS +M+S
Sbjct: 468 -NMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMIS-------------- 512
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
G++ NG +EA+ LF +L+ P TF LL+AC ++ +
Sbjct: 513 -----------------GFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYV 555
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
LG + ++F G E ++D++ + G +++ + TM
Sbjct: 556 DLGWKYF-----KSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTM 601
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 61/318 (19%)
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM------ 345
N+ + A+ G L EA +F +M R++VS +M+S YA+ + A +F +M
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATT 113
Query: 346 --------------------------LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
E+N VS+ +I G+ + G +EA L+
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLY------ 167
Query: 380 SVCPTHYTFGNLLNACANLAD-LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
T F + + + L+ L++G+ V G+ ++ +S++D Y K
Sbjct: 168 --AETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAV-----KEVVSYSSMVDGYCK 220
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIG 497
G + D +F+ M ER+ ++W AMI G + G+ + GLF +M G+ + + T+
Sbjct: 221 MGRILDARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAV 280
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGL---APLK-DHY--TCMVDLLGRAGCLDEAKTLI 551
+ AC EG S+ HGL PL+ D + ++ + + G + EAK +
Sbjct: 281 MFRACRDFFRYREG-------SQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVF 333
Query: 552 EAMPMQPDAVIWGSLLAA 569
M + D+V W SL+
Sbjct: 334 GVMKYK-DSVSWNSLITG 350
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 349/618 (56%), Gaps = 40/618 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M ++V ++ +++ L+K G + DA L+
Sbjct: 145 AASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQ 204
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M++GF ++ +ALG F +M S + +E + S + AC G+ +F +
Sbjct: 205 CPLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLA 264
Query: 171 TQVHALLSKSRY--------------------------------SSDVYMGSALIDMYGK 198
+ L KS DV +AL+D+Y +
Sbjct: 265 MSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAE 324
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW +L+ +EQ G A +A+ ++ +M+A G P+ +SV
Sbjct: 325 LGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSV 384
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACASL + G +IH + ++ N++ + +AL+DMY KC +L +A+ +F +P +N
Sbjct: 385 LGACASLQDLRSGRKIHNQTLKM-ACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKN 443
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V S++SGY+ S + A +F KM RNV SWN++I+GY QN + +AL F +
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF ++L ACA+L L++G+ H ++K G++ IFVG +L DMY K
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIK------ESIFVGTALSDMYAK 557
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M +R+ V+W AMI G A+NG+ E++ LF+ M+ G P+ T + +
Sbjct: 558 SGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAI 617
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH+GLVE YF M + G++P HYTCMVD+L RAG L EA+ L+ + +
Sbjct: 618 LFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKS 676
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A W +LL+AC ++RN +GE AK+L E++ N+ YVLLSNMYA G+W + +R
Sbjct: 677 EANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRI 736
Query: 619 LMRKRGVVKQPGCSWIEI 636
LM+ + K GCSW++I
Sbjct: 737 LMKGINLKKDGGCSWVQI 754
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 167/304 (54%), Gaps = 9/304 (2%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ D + S F+ +L +C + + R++H + +K ++ +F+ + LID+Y KC
Sbjct: 368 QMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCK 427
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A+ +F + KN+ WNS+I+G + +A LF MP R+ SWNS++SG+AQ
Sbjct: 428 QLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQ 487
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +AL F M + + E +F S L ACA +MG VHA + K +++
Sbjct: 488 NRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFV 547
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+AL DMY K G + ++RVF M +RN V+W ++I +NG A +++ +F M+++GI
Sbjct: 548 GTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHA----RLMRCEKLRNDLVLGNALVDMYAKCGKL 304
P+E T +++ AC+ GL HA +M+ + +VD+ A+ G L
Sbjct: 608 TPNEQTFLAILFACS-----HSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLARAGHL 662
Query: 305 NEAR 308
EA
Sbjct: 663 AEAE 666
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/684 (34%), Positives = 371/684 (54%), Gaps = 83/684 (12%)
Query: 26 LDSCLRS----KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDK 79
L CL S ++S +++HA+++++ + F ++++ A G L AR VF++
Sbjct: 40 LHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQ 99
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ N FT NSI + G+ + +A+ ++
Sbjct: 100 IPNPTTFTCNSI-------------------------------IRGYTNKNLPRQAILFY 128
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++F S +C + G Q+H +K ++SD Y+ + L++MY C
Sbjct: 129 QLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNC 185
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VFD M +++VSW ++I Y Q +A+++F RM + ++P+E+TL +V+
Sbjct: 186 GCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVL 245
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ACA + Q+H + + + VL +AL+D+Y KCG C P+
Sbjct: 246 TACARSRDLETAKQVH-KYIDETGIGFHTVLTSALMDVYCKCG------CY----PL--- 291
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
AR +F KM E+N+ WN +I G+ ++ + EEAL LF ++
Sbjct: 292 ------------------ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 333
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V T +LL AC +L L+LG+ H ++ K + E D+ +G +L+DMY KC
Sbjct: 334 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI------EVDVALGTALVDMYAKC 387
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+E R+F+ M E+D ++W A+IVG A G G +AL LF +M + KPD +T +GVL
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSHAGLV EG YF+SM ++G+ P +HY CMVD+LGRAG + EA+ LI+ MPM PD
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPD 507
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ LL+AC++H N+++ E A++L+E++P N G YVLLSN+Y+ + W ++R+L
Sbjct: 508 YFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 567
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD- 678
M +R + K PGCS IE+ G V+ F+ D HP + EIY L + R +K GYVP+ S+
Sbjct: 568 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEV 627
Query: 679 ----DEAYEEQNGSNSTSDCQIDF 698
DE +E S + I F
Sbjct: 628 LFDMDEKEKENELSLHSEKLAIAF 651
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 222/496 (44%), Gaps = 106/496 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L SC + + +++H K FAS+ +IQN L+++Y+ CGCL ARKVF
Sbjct: 139 DRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVF 195
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM NK+V +W ++I +W D EA+
Sbjct: 196 DKMVNKSVVSWATMIGAYAQW-------------------------------DLPHEAIK 224
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +E + + L+ACA S D + QVH + ++ + SAL+D+Y
Sbjct: 225 LFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYC 284
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG AR +F+ M E+N+ WN +I + ++ +AL +F M SG++ D+VT+AS
Sbjct: 285 KCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 344
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC L A + G +H + + EK+ D+ LG ALVDMYAKCG + A VF MP +
Sbjct: 345 LLIACTHLGALELGKWLHVYIEK-EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 403
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V ++W ALI G G+ +AL LF ++
Sbjct: 404 DV-------------------------------MTWTALIVGLAMCGQGLKALELFHEMQ 432
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P TF +L AC +H +V G+ + NS+ + Y
Sbjct: 433 MSEVKPDAITFVGVLAAC-----------SHAGLVNEGIAYF----------NSMPNKYG 471
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
S+E + M+ + G EA L + M + PD+ ++G
Sbjct: 472 IQPSIE---------------HYGCMVDMLGRAGRIAEAEDLIQNMPM---APDYFVLVG 513
Query: 498 VLCACS-HAGLVEEGR 512
+L AC H LV R
Sbjct: 514 LLSACRIHGNLVVAER 529
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 370/705 (52%), Gaps = 87/705 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C +S ++++H++II + F+ R++ VYA
Sbjct: 875 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAG--------------- 916
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSEALGY 138
+G + DA R+F P + WNS++ H EAL
Sbjct: 917 ----------------FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEI 960
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M + ++F + ACA K+ VH + + + ++++G+ L+ MYGK
Sbjct: 961 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 1020
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT---- 254
GR+ AR+VF+ M R+ VSWN++++ Y N A E+F M ++G+EP+ VT
Sbjct: 1021 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 1080
Query: 255 -------------------------------LASVVSACASLAAFKEGLQIHARLMRCEK 283
LA V+S LAAF EG IH +++
Sbjct: 1081 LSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG-G 1139
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
N L + N+L+ +Y K G +N AR +F + +N+VS +++S YA A +F
Sbjct: 1140 FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFL 1199
Query: 344 K--------MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ M+ NVVSW+A+I G+ G+ EEAL LFR ++ V T ++L+ C
Sbjct: 1200 QLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVC 1259
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA L LGR+ H HVV+ S + +I VGN LI+MY K GS ++G +FE + +
Sbjct: 1260 AELAALHLGREIHGHVVR------SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 1313
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +SWN M+ G +G G A+ F +M+ G +PD VT + VL ACSHAGLV EGR+ F
Sbjct: 1314 DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELF 1373
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
M KE + P +HY CMVDLLGRAG L EA ++++MP++P+A +WG+LL +C++H+N
Sbjct: 1374 DKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKN 1433
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E A ++ + +G Y+LLSN+YA GRW + +VR + +G+ K PG SWI+
Sbjct: 1434 TEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 1493
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
+ V +F + +H +E+Y +LK L +M+ GY+P+ +++
Sbjct: 1494 VKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDIDEEQ 1538
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 224/494 (45%), Gaps = 81/494 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S R VH +++ F + + N L+ +Y K G + ARKVF
Sbjct: 972 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 1031
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
++M+ ++ +WN++++G AS +F M E + +W S++S A+ +
Sbjct: 1032 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHV 1091
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
E + F +M + + LS F G +H + K + + +++ ++LI
Sbjct: 1092 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 1151
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ------------------------ 229
+YGK G V+ AR +F ++ +NIVSWN+LI+ Y
Sbjct: 1152 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 1211
Query: 230 ---------------NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
G +ALE+F RM + ++ + VT+ASV+S CA LAA G +I
Sbjct: 1212 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 1271
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H ++R + ++++GN L++MY K G E VF+++ ++++S +MV
Sbjct: 1272 HGHVVRS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMV-------- 1322
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
AGY +G E A+ F + ++ P TF +L+A
Sbjct: 1323 -----------------------AGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSA 1359
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-V 453
C++ + GR+ ++K F + + + ++D+ + G +++ ++ ++M V
Sbjct: 1360 CSHAGLVAEGRELFDKMIKE---FRVEPQMEHYA--CMVDLLGRAGLLQEASKVVKSMPV 1414
Query: 454 ERDWVSWNAMIVGC 467
E + W A++ C
Sbjct: 1415 EPNACVWGALLNSC 1428
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 342/564 (60%), Gaps = 46/564 (8%)
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
A+H EAL F +M++ +++ +AL++CA +++ +G Q+HA + ++ + ++
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ SAL+D+Y KC + A+RVFDGM + + VSW S+I+ + +NG +A+ F M+ S
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 247 GIEPDEVTLASVVSACASLAA-FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
I+P+ VT SV+SAC L F + +HA +++ V+ + L+D Y+KCG+++
Sbjct: 197 QIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVV-SCLIDCYSKCGRID 255
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A +F ++++ ++F M I+GY+QN
Sbjct: 256 QAVLLF--------------------GTTIERDNILFNSM-----------ISGYSQNLF 284
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EEAL LF ++ + PT +T ++LNAC +L LQ GRQ H+ V K G ES+
Sbjct: 285 GEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKM------GSESN 338
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+FV ++L+DMY KCGS+++ +F+ VE++ V W +MI G AQ+G G E LGLF++++
Sbjct: 339 VFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVT 398
Query: 486 -CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G PDH+ VL AC+HAG +++G YF+ M +++GL P D Y C+VDL R G L
Sbjct: 399 EEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHL 458
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
+AK L+EA+P +P++V+WGS L++CK++ LG A KL ++EP ++ PYV ++++Y
Sbjct: 459 RKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIY 518
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A+ G W EVV +RKLM+++G+ K G SW+E+ V+VF+V D HP +++I + L+ L
Sbjct: 519 AQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVDKRVHVFLVADASHPRSRDICVELERLN 578
Query: 665 REMKRVGYVPN------ASDDEAY 682
EMK VGY P + DDE +
Sbjct: 579 LEMKEVGYTPQQIFELESVDDEQF 602
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 234/491 (47%), Gaps = 78/491 (15%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L+SC + + ++HARII++ F +F+ + L+D+YAKC
Sbjct: 108 LNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKC------------------ 149
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
++I+ DA R+F M + DQ SW S++SGF+++ R EA+ +F +M
Sbjct: 150 ---DAIV----------DAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 146 NFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++ S +SAC G F +HA + K + ++ S LID Y KCGR+
Sbjct: 197 QIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 256
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +F ER+ + +NS+I+ Y QN +AL++FV M +G+ P + TL S+++AC S
Sbjct: 257 AVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGS 316
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L ++G Q+H+ + + N V+ +AL+DMY+KCG ++EARCVFD+ +N V TS
Sbjct: 317 LTILQQGRQVHSLVAKMGSESNVFVV-SALLDMYSKCGSIDEARCVFDQAVEKNTVLWTS 375
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCP 383
M++GYA Q+G E LGLF RL+ E P
Sbjct: 376 MITGYA-------------------------------QSGRGPEGLGLFERLVTEEGFTP 404
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
H F +L AC + L G +R G D+ L+D+Y++ G +
Sbjct: 405 DHICFTAVLTACNHAGFLDKGIDYFNQ-----MRRDYGLVPDLDQYACLVDLYVRNGHLR 459
Query: 444 DGCRIFETM-VERDWVSWNAMIVGCAQNG---YGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+ E + E + V W + + C G G EA KM C P +V M +
Sbjct: 460 KAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP-YVAMASIY 518
Query: 500 CACSHAGLVEE 510
+ AGL E
Sbjct: 519 ---AQAGLWSE 526
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 37/380 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDT-RRVHARIIKSQFASEIFIQNRLIDVYAK 66
K+++G + + ++ +C +++ D +HA ++K F + F+ + LID Y+K
Sbjct: 191 KEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSK 250
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG ID A LF + ERD +NSM+SG+
Sbjct: 251 CG-------------------------------RIDQAVLLFGTTIERDNILFNSMISGY 279
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+Q+ EAL FV+M + ++++ S L+AC + G QVH+L++K S+V
Sbjct: 280 SQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNV 339
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA- 245
++ SAL+DMY KCG + AR VFD E+N V W S+IT Y Q+G + L +F R++
Sbjct: 340 FVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTE 399
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G PD + +V++AC +G+ ++ R L DL LVD+Y + G L
Sbjct: 400 EGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLR 459
Query: 306 EARCVFDRMPIR-NVVSETSMVSG---YAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
+A+ + + +P N V S +S Y +A + A KM + + A+ + Y
Sbjct: 460 KAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYA 519
Query: 362 QNGENEEALGLFRLLKRESV 381
Q G E + + +L+K++ +
Sbjct: 520 QAGLWSEVVEIRKLMKQKGL 539
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 118/271 (43%), Gaps = 44/271 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+L++C + R+VH+ + K S +F+ + L+D+Y+KCG
Sbjct: 307 LTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGS------------ 354
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
ID+A +F E++ W SM++G+AQ R E LG F +
Sbjct: 355 -------------------IDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFER 395
Query: 142 MHSEN-FALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +E F F + L+AC AG +D K + + D+ + L+D+Y +
Sbjct: 396 LVTEEGFTPDHICFTAVLTACNHAGFLD-KGIDYFNQMRRDYGLVPDLDQYACLVDLYVR 454
Query: 199 CGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPAS---DALEVFVRMMASGIEPDEVT 254
G + A+ + + + E N V W S ++ + G A +A + +M P V
Sbjct: 455 NGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP-YVA 513
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+AS+ A + E ++I +LM+ + LR
Sbjct: 514 MASIY---AQAGLWSEVVEIR-KLMKQKGLR 540
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/650 (34%), Positives = 356/650 (54%), Gaps = 69/650 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A L C + ++H +K E+ + N L+ +YAKC CL
Sbjct: 251 LACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCL----------- 299
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++A RLF MP D +WN M+SG Q+ +AL F
Sbjct: 300 --------------------EEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCD 339
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + S L A FK G ++H + ++ DV++ SAL+D+Y KC
Sbjct: 340 MQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRD 399
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A+ VFD + ++V +++I+ Y N + A+++F ++A GI+P+ V +AS + A
Sbjct: 400 VRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPA 459
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CAS+AA + G ++H +++ + +AL+DMY+KCG+L+
Sbjct: 460 CASMAAMRIGQELHGYVLK-NAYEGRCYVESALMDMYSKCGRLD---------------- 502
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+S Y MF+KM ++ V+WN++I+ + QNGE EEAL LFR + E V
Sbjct: 503 ----LSHY-----------MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGV 547
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ T ++L+ACA L + G++ H ++K +R +D+F ++LIDMY KCG+
Sbjct: 548 KYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIR------ADLFAESALIDMYGKCGN 601
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E R+FE M E++ VSWN++I +G E++ L M G K DHVT + ++ A
Sbjct: 602 LELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISA 661
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAG V+EG + F M++E+ + P +H +CMVDL RAG LD+A I MP +PDA
Sbjct: 662 CAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAG 721
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL AC+VHRN+ L E +++L +++P N G YVL+SN+ A GRW V ++R+LM+
Sbjct: 722 IWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMK 781
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
+ V K PG SW+++ ++F+ DK HP ++EIY+ LK L E+K+ G
Sbjct: 782 DKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEG 831
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 268/557 (48%), Gaps = 73/557 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D ++ SC ++ R VH ++++ + LI +YA G L GAR+VF
Sbjct: 146 DGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVF 205
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M ++ WN ++ G +K G + A LF R A G
Sbjct: 206 DGMDERDCVLWNVMMDGYVKAGDVASAVGLF----------------------RVMRASG 243
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
NFA + LS CA D G Q+H L K +V + + L+ MY
Sbjct: 244 C-----DPNFA----TLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYA 294
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A R+F M ++V+WN +I+ QNG DAL +F M SG++PD VTLAS
Sbjct: 295 KCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLAS 354
Query: 258 VVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ A L FK+G +IH ++R C + D+ L +ALVD+Y KC + A+ VFD
Sbjct: 355 LLPALTELNGFKQGKEIHGYIVRNCAHV--DVFLVSALVDIYFKCRDVRMAQNVFDATKS 412
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+VV ++M+S GY N +E A+ +FR L
Sbjct: 413 IDVVIGSTMIS-------------------------------GYVLNRMSEAAVKMFRYL 441
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P + L ACA++A +++G++ H +V+K+ E +V ++L+DMY
Sbjct: 442 LALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAY------EGRCYVESALMDMY 495
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG ++ +F M +D V+WN+MI AQNG EAL LF++M++ G K ++VT+
Sbjct: 496 SKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTIS 555
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L AC+ + G++ + K A L + ++D+ G+ G L+ A + E MP
Sbjct: 556 SILSACAGLPAIYYGKEIHGIIIKGPIRADLFAE-SALIDMYGKCGNLELALRVFEHMP- 613
Query: 557 QPDAVIWGSLLAACKVH 573
+ + V W S+++A H
Sbjct: 614 EKNEVSWNSIISAYGAH 630
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 221/479 (46%), Gaps = 59/479 (12%)
Query: 103 DASRLFASMPERDQ---CSWNSMVSGFAQHDRFSEALGYFVKM--HSENFALSEYSFGSA 157
DA +F+S+P WN ++ GF A+ ++VKM H + ++
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
+ +CA +G VH D+Y+GSALI MY G + AR VFDGM ER+
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V WN ++ Y + G + A+ +F M ASG +P+ TLA +S CA+ A G+Q+H
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ L ++ + N LV MYAKC L EA +F MP ++V+ M+S
Sbjct: 274 AVK-YGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS---------- 322
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
G QNG ++AL LF +++ + P T +LL A
Sbjct: 323 ---------------------GCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTE 361
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L + G++ H ++V+ + D+F+ ++L+D+Y KC V +F+ D
Sbjct: 362 LNGFKQGKEIHGYIVR------NCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDV 415
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
V + MI G N A+ +F+ +L G KP+ V + L AC+ + G++
Sbjct: 416 VIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQEL--- 472
Query: 518 MSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
HG LK+ Y + ++D+ + G LD + + M + D V W S++++
Sbjct: 473 ----HGYV-LKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISS 525
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 36/366 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A LL + + +H I+++ ++F+ + L+D+Y KC + A+ VF
Sbjct: 348 DSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVF 407
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + +V +++I+G + + A ++F R+ ALG
Sbjct: 408 DATKSIDVVIGSTMISGYVLNRMSEAAVKMF----------------------RYLLALG 445
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+K ++ A S L ACA ++G ++H + K+ Y Y+ SAL+DMY
Sbjct: 446 --IKPNAVMVA-------STLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYS 496
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCGR+ + +F M ++ V+WNS+I+ + QNG +AL++F +M+ G++ + VT++S
Sbjct: 497 KCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISS 556
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SACA L A G +IH +++ +R DL +AL+DMY KCG L A VF+ MP +
Sbjct: 557 ILSACAGLPAIYYGKEIHGIIIK-GPIRADLFAESALIDMYGKCGNLELALRVFEHMPEK 615
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLF 373
N VS S++S Y VK + + M E V++ ALI+ G+ +E L LF
Sbjct: 616 NEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLF 675
Query: 374 RLLKRE 379
R + E
Sbjct: 676 RCMTEE 681
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q++ + ++ + +L +C ++ + +H IIK +++F ++ LID+Y KC
Sbjct: 540 RQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKC 599
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMV 123
G L A +VF+ M KN +WNSII+ G + ++ L M E D ++ +++
Sbjct: 600 GNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALI 659
Query: 124 SGFAQHDRFSEALGYFVKMHSE 145
S A + E L F M E
Sbjct: 660 SACAHAGQVQEGLRLFRCMTEE 681
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/528 (39%), Positives = 308/528 (58%), Gaps = 42/528 (7%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + +AL+ Y K G + + FD M R+ VS+N+ I + N ++LE+F RM
Sbjct: 88 DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G EP E T+ S+++A A L + G QIH ++ L N + + NAL DMYAKCG++
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGN-VFIWNALTDMYAKCGEI 206
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASS------------------------------ 334
+AR +FD + +N+VS M+SGYAK
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAY 266
Query: 335 -----VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
V AR +F++ E+++V W A++ GY +NG E+AL LF + E + P YT
Sbjct: 267 CQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLS 326
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+++++CA LA L G+ H G L+G +++ V ++LIDMY KCG ++D +F
Sbjct: 327 SVVSSCAKLASLHHGQAVH------GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
M R+ VSWNAMIVGCAQNG+ +AL LF+ ML KPD+VT IG+L AC H +E
Sbjct: 381 NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIE 440
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+G++YF S+S +HG+ P DHY CMV+LLGR G +++A LI+ M PD +IW +LL+
Sbjct: 441 QGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C +I+ E A+ L E++P+ + PY++LSNMYA +GRW +V VR LM+ + V K
Sbjct: 501 CSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFA 560
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
G SWIEI V+ F +D+ HP +++IY L ML +++ G+ PN +
Sbjct: 561 GFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTN 608
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 253/495 (51%), Gaps = 53/495 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVF 77
S + +L+ C+R+ ++ +R+ + + F ++ F+ N+L+ +YAK G L A+ +F
Sbjct: 22 SEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM ++ F+WN++++ K G I + F MP RD S+N+ ++GF+ + E+L
Sbjct: 82 DKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E F +EY+ S L+A A +D + G Q+H + + +V++ +AL DMY
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYA 201
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR +FD + ++N+VSWN +I+ Y +NG + + +M SG PD+VT+++
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMST 261
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++A E AR + E D+V A++ YAK G+ +A +F+ M +
Sbjct: 262 IIAAYCQCGRVDE-----ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE 316
Query: 318 ---------------------------------------NVVSETSMVSGYAKASSVKSA 338
N++ ++++ Y+K + A
Sbjct: 317 HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDA 376
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F M RNVVSWNA+I G QNG +++AL LF + ++ P + TF +L+AC +
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 399 ADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERD 456
++ G++ + +HG+ D + ++++ + G +E + + M + D
Sbjct: 437 NWIEQGQEYFDSISNQHGMT----PTLDHYA--CMVNLLGRTGRIEQAVALIKNMAHDPD 490
Query: 457 WVSWNAMIVGCAQNG 471
++ W+ ++ C+ G
Sbjct: 491 FLIWSTLLSICSTKG 505
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 191/344 (55%), Gaps = 15/344 (4%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D L N L+ +YAK GKL +A+ +FD+M R+ S +++S YAK+ S+++ + F +M
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
R+ VS+N IAG++ N +E+L LF+ ++RE PT YT ++LNA A L DL+ G+Q
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H ++ +R G ++F+ N+L DMY KCG +E +F+ + +++ VSWN MI G
Sbjct: 177 IHGSII---VRNFLG---NVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A+NG + +GL +M L G PD VTM ++ A G V+E R+ FS ++ +
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVC- 289
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYV- 582
+T M+ + G ++A L M ++PD+ S++++C ++ G+ V
Sbjct: 290 ----WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
K +L +N L +MY++ G + V LM R VV
Sbjct: 346 GKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVV 389
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++ SC + S+ + VH + I + + + + + LID+Y+KCG + AR VF
Sbjct: 321 DSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVF 380
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M +NV +WN++I G C+ N HD+ +AL
Sbjct: 381 NLMPTRNVVSWNAMIVG----------------------CAQNG-------HDK--DALE 409
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMY 196
F M + F +F LSAC + G + +S + + + ++++
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLL 469
Query: 197 GKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
G+ GR+ A + M + + + W++L++ G +A EV R +
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNA-EVAARHL 517
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 314/528 (59%), Gaps = 42/528 (7%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
DV+ +A++ Y K G V R VFD M + VS+N++I + NG +S ALE FVRM
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G E + T SV+ AC+ L K G QIH R++ L + + NAL +MYAKCG L
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIV-ATSLGESVFVWNALTNMYAKCGAL 206
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML------------------ 346
++AR +FDRM +NVVS SM+SGY + ++ +F +M
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAY 266
Query: 347 -----------------ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
E++ V W ++ G QNG+ E+AL LFR + E+V P ++T
Sbjct: 267 FQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTIS 326
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+++++CA LA L G+ H G + G + D+ V ++L+DMY KCG D +F
Sbjct: 327 SVVSSCARLASLCQGQAVH------GKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVF 380
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M+ R+ +SWN+MI+G AQNG EAL L+++ML KPD++T +GVL AC HAGLVE
Sbjct: 381 KRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVE 440
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G+ YF S+SK HG+ P DHY+CM++LLGRAG +D+A LI++M +P+ +IW +LL+
Sbjct: 441 RGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSV 500
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+++ ++ GE A+ L E++P N+GPY++LSN+YA GRW +V VR LM+ + K
Sbjct: 501 CRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFA 560
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SWIEI V+ F+ +D+ H ++IY L L ++++ G+ P+ +
Sbjct: 561 AYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTN 608
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 261/490 (53%), Gaps = 43/490 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKV 76
+S + +LL C+RS V +R+ + + ++ F+QNRL+ +YAK G L AR +
Sbjct: 21 NSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDL 80
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKMS ++VF+WN++++ K G ++D +F M D S+N++++GF+ + S+AL
Sbjct: 81 FDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQAL 140
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+FV+M E F ++Y+ S L AC+ +D K G Q+H + + V++ +AL +MY
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMY 200
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + AR +FD M +N+VSWNS+I+ Y QNG ++F M +SG+ PD+VT++
Sbjct: 201 AKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTIS 260
Query: 257 SVVS----------ACASLAAFKEGLQI--------------------HARLMRCEKLRN 286
+++S AC + KE ++ R M E +R
Sbjct: 261 NILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRP 320
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPI----RNVVSETSMVSGYAKASSVKSARLMF 342
D +++V A+ L + + V + I +++ +++V Y+K A ++F
Sbjct: 321 DNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVF 380
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ML RNV+SWN++I GY QNG++ EAL L+ + E++ P + TF +L+AC + ++
Sbjct: 381 KRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVE 440
Query: 403 LGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERDWVSW 460
G+ + K HG+ S +I++ + G ++ + ++M E + + W
Sbjct: 441 RGQGYFYSISKIHGMNPTFDHYS------CMINLLGRAGYMDKAVDLIKSMTFEPNCLIW 494
Query: 461 NAMIVGCAQN 470
+ ++ C N
Sbjct: 495 STLLSVCRIN 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 38/214 (17%)
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
++ LL C D+ ++ TH+ H + +D F+ N L+ +Y K G++ D
Sbjct: 24 SYTRLLLQCVRSNDVVQAKRLQTHMDLHLY-----QPTDTFLQNRLLHLYAKSGNLSDAR 78
Query: 447 RIFETMVERDWVSWNAM-------------------------------IVGCAQNGYGTE 475
+F+ M RD SWNAM I G + NG ++
Sbjct: 79 DLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQ 138
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
AL F +M G + T + VL ACS ++ G++ + L + +
Sbjct: 139 ALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVAT-SLGESVFVWNALT 197
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++ + G LD+A+ L + M + + V W S+++
Sbjct: 198 NMYAKCGALDQARWLFDRM-VNKNVVSWNSMISG 230
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/653 (34%), Positives = 354/653 (54%), Gaps = 70/653 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ + R KS S +++HA+ I++Q S + +I +Y L+ A VF + +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPP 69
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V W S+I +C F FS AL FV+M +
Sbjct: 70 VLAWKSVI-----------------------RC--------FTDQSLFSRALASFVEMRA 98
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
F S L +C +D + G VH + + D+Y G+AL++MY K +
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDS 158
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
R+VF+ M +++VS+N++I Y Q+G DAL + M S ++PD TL+SV+ +
Sbjct: 159 VRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSE 218
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+G +IH ++R + + +D+ +G++LVDMYA
Sbjct: 219 YVDVLKGKEIHGYVIR-KGIDSDVYIGSSLVDMYA------------------------- 252
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
K++ ++ + +F+ + R+ +SWN+L+AGY QNG EAL LFR + V P
Sbjct: 253 ------KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPG 306
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
F +++ ACA+LA L LG+Q H +V++ G +IF+ ++L+DMY KCG+++
Sbjct: 307 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGF------GRNIFIASALVDMYSKCGNIQA 360
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+IF+ M D VSW A+I+G A +G+G EA+ LF++M G KP+ V + VL ACSH
Sbjct: 361 ARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 420
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV+E YF+SM+K +GL +HY + DLLGRAG L+EA I M ++P +W
Sbjct: 421 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWS 480
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL++C VH+N+ L E VA+K+ I+ N G YVL+ NMYA GRW E+ ++R +RK+G
Sbjct: 481 TLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKG 540
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ K+P CSWIE+ + F+ D+ HP I LK + +M++ GYV + S
Sbjct: 541 LRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTS 593
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 184/382 (48%), Gaps = 63/382 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F +L SC + VH I++ +++ N L+++Y+K + RKVF
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M K+V ++N++I G + G +DA R+ M D
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSD---------------------- 201
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + F LS S L + VD G ++H + + SDVY+GS+L+DMY
Sbjct: 202 ----LKPDAFTLS-----SVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYA 252
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K R+ + RVF + R+ +SWNSL+ Y QNG ++AL +F +M+++ + P V +S
Sbjct: 253 KSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSS 312
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA LA G Q+H ++R RN + + +ALVDMY+KCG + AR +FDRM +
Sbjct: 313 VIPACAHLATLHLGKQLHGYVLRGGFGRN-IFIASALVDMYSKCGNIQAARKIFDRMNLH 371
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ VS W A+I G+ +G EA+ LF +K
Sbjct: 372 DEVS-------------------------------WTAIIMGHALHGHGHEAVSLFEEMK 400
Query: 378 RESVCPTHYTFGNLLNACANLA 399
R+ V P F +L AC+++
Sbjct: 401 RQGVKPNQVAFVAVLTACSHVG 422
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 118/254 (46%), Gaps = 15/254 (5%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R +Q+V + F+ ++ +C ++ +++H +++ F IFI + L+D+Y
Sbjct: 293 RLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMY 352
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWN 120
+KCG + ARK+FD+M+ + +W +II G G +A LF M + +Q ++
Sbjct: 353 SKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 412
Query: 121 SMVSGFAQHDRFSEALGYF---VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
++++ + EA GYF K++ N L Y+ + L AG ++ + + +
Sbjct: 413 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE-----EAYDFI 467
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPAS 234
SK R + S L+ + A +V + + N+ ++ + Y NG
Sbjct: 468 SKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWK 527
Query: 235 DALEVFVRMMASGI 248
+ ++ +R+ G+
Sbjct: 528 EMAKLRLRVRKKGL 541
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 370/705 (52%), Gaps = 87/705 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C +S ++++H++II + F+ R++ VYA
Sbjct: 37 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAG--------------- 78
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSEALGY 138
+G + DA R+F P + WNS++ H EAL
Sbjct: 79 ----------------FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEI 122
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M + ++F + ACA K+ VH + + + ++++G+ L+ MYGK
Sbjct: 123 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 182
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT---- 254
GR+ AR+VF+ M R+ VSWN++++ Y N A E+F M ++G+EP+ VT
Sbjct: 183 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242
Query: 255 -------------------------------LASVVSACASLAAFKEGLQIHARLMRCEK 283
LA V+S LAAF EG IH +++
Sbjct: 243 LSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG-G 301
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
N L + N+L+ +Y K G +N AR +F + +N+VS +++S YA A +F
Sbjct: 302 FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFL 361
Query: 344 K--------MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ M+ NVVSW+A+I G+ G+ EEAL LFR ++ V T ++L+ C
Sbjct: 362 QLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVC 421
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA L LGR+ H HVV+ S + +I VGN LI+MY K GS ++G +FE + +
Sbjct: 422 AELAALHLGREIHGHVVR------SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 475
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +SWN M+ G +G G A+ F +M+ G +PD VT + VL ACSHAGLV EGR+ F
Sbjct: 476 DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELF 535
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
M KE + P +HY CMVDLLGRAG L EA ++++MP++P+A +WG+LL +C++H+N
Sbjct: 536 DKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKN 595
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E A ++ + +G Y+LLSN+YA GRW + +VR + +G+ K PG SWI+
Sbjct: 596 TEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
+ V +F + +H +E+Y +LK L +M+ GY+P+ +++
Sbjct: 656 VKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDIDEEQ 700
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 224/494 (45%), Gaps = 81/494 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S R VH +++ F + + N L+ +Y K G + ARKVF
Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
++M+ ++ +WN++++G AS +F M E + +W S++S A+ +
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHV 253
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
E + F +M + + LS F G +H + K + + +++ ++LI
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ------------------------ 229
+YGK G V+ AR +F ++ +NIVSWN+LI+ Y
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 230 ---------------NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
G +ALE+F RM + ++ + VT+ASV+S CA LAA G +I
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H ++R + ++++GN L++MY K G E VF+++ ++++S +MV
Sbjct: 434 HGHVVR-SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMV-------- 484
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
AGY +G E A+ F + ++ P TF +L+A
Sbjct: 485 -----------------------AGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSA 521
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-V 453
C++ + GR+ ++K F + + + ++D+ + G +++ ++ ++M V
Sbjct: 522 CSHAGLVAEGRELFDKMIK---EFRVEPQMEHYA--CMVDLLGRAGLLQEASKVVKSMPV 576
Query: 454 ERDWVSWNAMIVGC 467
E + W A++ C
Sbjct: 577 EPNACVWGALLNSC 590
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/595 (37%), Positives = 334/595 (56%), Gaps = 66/595 (11%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
P R SW + + + F EA+ +++M ++F + L A +G D K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 172 QVHALLSKSRY-SSDVYMGSALIDMYGKCG--------------------RVSCARRVFD 210
Q+HA K Y SS V + + L++MYGKCG RV ++ +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+R++VSWN++I+ + Q+ S+AL F M+ G+E D VT+ASV+ AC+ L
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +IHA ++R L + +G+ALVDMY C +
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQ--------------------------- 265
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFG 389
V+S R +F +L R + WNA+I+GY +NG +E+AL LF ++K + P T
Sbjct: 266 ----VESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMA 321
Query: 390 NLLNACAN-LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+++ AC + LA + G++ H + +++ L SDI VG++L+DMY KCG + R+
Sbjct: 322 SVMPACVHSLAAIAKGKEIHAYAIRNML------ASDITVGSALVDMYAKCGCLNLSRRV 375
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL----CGE-KPDHVTMIGVLCACS 503
F M ++ ++WN +I+ C +G G EAL LFK M+ GE KP+ VT I V ACS
Sbjct: 376 FNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACS 435
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV-I 562
H+GL+ EG F M +HG+ P DHY C+VDLLGRAG L+EA L+ MP + D V
Sbjct: 436 HSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA 495
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W SLL AC++H+N+ LGE AK LL +EP+ + YVLLSN+Y+ G W + + VRK MR+
Sbjct: 496 WSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQ 555
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
GV K+PGCSWIE V+ FM D HP +++++ L+ L+ +M++ GYVP+ S
Sbjct: 556 MGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTS 610
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 238/466 (51%), Gaps = 69/466 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKV 76
D+ F +L + + + ++HA +K + +S + + N L+++Y KCG +
Sbjct: 91 DNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCG------GI 144
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DK FT N+++ K G +DD+ LF S +RD SWN+M+S F+Q DRFSEAL
Sbjct: 145 GDK-----TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL 199
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDM 195
+F M E L + S L AC+ +G ++HA +L + + ++GSAL+DM
Sbjct: 200 AFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDM 259
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVT 254
Y C +V RRVFD + R I WN++I+ Y +NG AL +F+ M+ +G+ P+ T
Sbjct: 260 YCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTT 319
Query: 255 LASVVSACA-SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+ASV+ AC SLAA +G +IHA +R L +D+ +G+ALVDMYAKCG LN +R VF+
Sbjct: 320 MASVMPACVHSLAAIAKGKEIHAYAIR-NMLASDITVGSALVDMYAKCGCLNLSRRVFNE 378
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP +NV++WN LI +G+ EEAL LF
Sbjct: 379 MP-------------------------------NKNVITWNVLIMACGMHGKGEEALELF 407
Query: 374 RLLKRES-----VCPTHYTFGNLLNACANLADLQLG-----RQAHTHVVKHGLRFLSGEE 423
+ + E+ P TF + AC++ + G R H H V+
Sbjct: 408 KNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE--------PT 459
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV-SWNAMIVGC 467
SD + ++D+ + G +E+ + TM E D V +W++++ C
Sbjct: 460 SDHYA--CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 503
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/673 (36%), Positives = 367/673 (54%), Gaps = 78/673 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRR----VHARIIKSQFA-SEIFIQNRLIDVYAKC 67
DL ++S + LL + + + RR VHA +I++ +++ I N L+++YAK
Sbjct: 376 DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 435
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G I DA +F M E+D SWNS++SG
Sbjct: 436 GA-------------------------------IADACSVFELMVEKDSVSWNSLISGLD 464
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q++ +A F +M S ++ S LS+CA +G Q+H K +DV
Sbjct: 465 QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 524
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY-EQNGPASDALEVFVRMMAS 246
+ +AL+ +Y + G + +VF M E + VSWNS+I + S A++ F++MM
Sbjct: 525 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRG 584
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLN 305
G VT +++SA +SL+ + QIHA +++ C L +D +GNAL+ Y KCG++N
Sbjct: 585 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYC--LSDDTAIGNALLSCYGKCGEMN 642
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
E +F RM SET R+ VSWN++I+GY N
Sbjct: 643 ECEKIFARM------SET------------------------RDEVSWNSMISGYIHNEL 672
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+A+ L + ++ +TF +L+ACA++A L+ G + H ++ L ESD
Sbjct: 673 LHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACL------ESD 726
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ VG++L+DMY KCG ++ R FE M R+ SWN+MI G A++G+G +AL LF +M+L
Sbjct: 727 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 786
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G+ PDHVT +GVL ACSH G VEEG ++F SMS+ + L+P +H++CMVDLLGRAG LD
Sbjct: 787 DGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 846
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNM 603
E I +MPM+P+ +IW ++L AC RN LG A+ LLE+EP N+ YVLL+NM
Sbjct: 847 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANM 906
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
YA +W +V + R M++ V K+ GCSW+ + V+VF+ DK HP IY L+ L
Sbjct: 907 YASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLREL 966
Query: 664 TREMKRVGYVPNA 676
R+M+ GY+P
Sbjct: 967 NRKMRDAGYIPQT 979
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 276/567 (48%), Gaps = 84/567 (14%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F S F L++ S + R +H + IK F +F+ N LI++Y + G L A+K
Sbjct: 68 FSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 127
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD+MSN+N+ TW +I SG+ Q+ + EA
Sbjct: 128 LFDEMSNRNLVTWACLI-------------------------------SGYTQNGKPDEA 156
Query: 136 LGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
F M F + Y+FGSAL AC +G K+G Q+H L+SK+RY SDV + + LI
Sbjct: 157 CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 216
Query: 194 DMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI---- 248
MYG C + AR VFDG+ RN +SWNS+I+ Y + G A A ++F M G+
Sbjct: 217 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 276
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLM-RCEK--LRNDLVLGNALVDMYAKCGKLN 305
+P+E T S+++ S F GL + +++ R EK DL + +ALV +A+ G +
Sbjct: 277 KPNEYTFGSLITTACSSVDF--GLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTD 334
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER---NVVSWNALIAGYTQ 362
+A+ +F++M +RNVVS ++ G K ++A +F +M + N S+ L++ +++
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSE 394
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
EE +R+ GR+ H HV++ GL
Sbjct: 395 FSVLEEG-------RRK------------------------GREVHAHVIRTGL-----N 418
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
++ + +GN L++MY K G++ D C +FE MVE+D VSWN++I G QN +A F +
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M G P + T+I L +C+ G + G + K GL ++ L G
Sbjct: 479 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKL-GLDTDVSVSNALLALYAETG 537
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAA 569
C E + MP + D V W S++ A
Sbjct: 538 CFTECLKVFSLMP-EYDQVSWNSVIGA 563
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/545 (27%), Positives = 258/545 (47%), Gaps = 73/545 (13%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKC-GCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++H I K+++ S++ + N LI +Y C AR VFD + +N +WNSII+ +
Sbjct: 195 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 254
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G A LF+SM + E LG+ +F +EY+FGS +
Sbjct: 255 GDAVSAYDLFSSMQK--------------------EGLGF-------SFKPNEYTFGSLI 287
Query: 159 SACAGSVDFKMGT--QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+ SVDF + Q+ A + KS + D+Y+ SAL+ + + G A+ +F+ M RN
Sbjct: 288 TTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRN 347
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDE-VTLASVVSACASLA-AFKEGLQ 273
+VS N L+ + A +VF M GI D V L S S + L ++G +
Sbjct: 348 VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGRE 407
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+HA ++R N + +GN LV+MYAK G + +A VF+ M ++ VS
Sbjct: 408 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS------------ 455
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
WN+LI+G QN +E+A F ++R P+++T + L+
Sbjct: 456 -------------------WNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLS 496
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
+CA+L + LG Q H +K GL ++D+ V N+L+ +Y + G + ++F M
Sbjct: 497 SCASLGWIMLGEQIHCDGLKLGL------DTDVSVSNALLALYAETGCFTECLKVFSLMP 550
Query: 454 ERDWVSWNAMIVGCAQNGYG-TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
E D VSWN++I + + ++A+ F +M+ G VT I +L A S L E
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 610
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ ++ ++ L+ ++ G+ G ++E + + M D V W S+++ +
Sbjct: 611 Q-IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG-YI 668
Query: 573 HRNIM 577
H ++
Sbjct: 669 HNELL 673
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 33/309 (10%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ N+ ++++ Y + + SA+ +F +M RN+V+W LI+GYTQNG+ +EA FR
Sbjct: 103 VGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRD 162
Query: 376 LKRESVCPTHYTFGNLLNAC--ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ R P HY FG+ L AC + + +LG Q HGL + SD+ V N LI
Sbjct: 163 MVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI------HGLISKTRYGSDVVVCNVLI 216
Query: 434 DMYMKC-GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM----LLCGE 488
MY C S D +F+ + R+ +SWN++I ++ G A LF M L
Sbjct: 217 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 276
Query: 489 KPDHVT---MIGVLCACSHAGL--VEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRA 541
KP+ T +I C+ GL +E+ +++ L+D Y + +V R
Sbjct: 277 KPNEYTFGSLITTACSSVDFGLCVLEQ------MLARVEKSGFLQDLYVSSALVSGFARF 330
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP---SNSGPYV 598
G D+AK + E M ++ + G ++ K + GE AK E++ NS YV
Sbjct: 331 GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ----GEAAAKVFHEMKDLVGINSDSYV 386
Query: 599 LLSNMYAEL 607
+L + ++E
Sbjct: 387 VLLSAFSEF 395
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 337/590 (57%), Gaps = 41/590 (6%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
P R C ++V + ++ +EA+ + L + S L CA S + G
Sbjct: 21 PRRRPCLVEAIVK-LCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGK 79
Query: 172 QVHALLSKSRYS-SDVYMGSALIDMYGKCGR----------------------------- 201
+VH L + ++ + LI+MY KCG+
Sbjct: 80 RVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKL 139
Query: 202 --VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
+ AR++FD M E+++VSWN+++ + Q G +AL + GI+ + + A V+
Sbjct: 140 GMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVL 199
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ C L Q+H +++ L N +VL ++++D Y KCG + +AR +FD M R+V
Sbjct: 200 TVCVKLKEVGLTRQVHGQILVAGFLSN-VVLSSSVLDAYVKCGLMGDARKLFDEMSARDV 258
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
++ T+MVSGYAK +KSA +F +M E+N VSW ALI+GY +NG +AL LF +
Sbjct: 259 LAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLF 318
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P +TF + L ACA++A L+ G+Q H ++++ + + V ++LIDMY KC
Sbjct: 319 HVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINF------QPNTIVVSALIDMYSKC 372
Query: 440 GSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
GS+ G ++F+ M + D V WN +I AQ+G G EA+ + M+ G KPD +T + +
Sbjct: 373 GSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVI 432
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH+GLV++G +F SMS ++G+ P ++HY C++DLLGRAGC +E +E MP +P
Sbjct: 433 LNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKP 492
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D +W +LL C++H +I LG A++L+E+EP +S YVLLS++YA LGRW V +VR+
Sbjct: 493 DDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQ 552
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
LM +R V K+ SW+EI V+ F V D HPL ++IY VL+ L +M+
Sbjct: 553 LMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQME 602
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 243/495 (49%), Gaps = 81/495 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARK 75
LDS A LL C S+++ + +RVH + + F+ N LI++YAKCG ARK
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFDKMS +N+++WN++++G K G I A +LF MPE+D SWN+MV AQ + EA
Sbjct: 117 VFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEA 176
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L ++ + + +SF L+ C + + QVH + + + S+V + S+++D
Sbjct: 177 LRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDA 236
Query: 196 YGKCGRVSCARRVFDGMR-------------------------------ERNIVSWNSLI 224
Y KCG + AR++FD M E+N VSW +LI
Sbjct: 237 YVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALI 296
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Y +NG ALE+F +MM + PD+ T +S + ACAS+A+ K G QIHA L+R
Sbjct: 297 SGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQ 356
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
N +V+ +AL+DMY+KCG L R VFD LM K
Sbjct: 357 PNTIVV-SALIDMYSKCGSLGIGRKVFD---------------------------LMGNK 388
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+ +VV WN +I+ Q+G EEA+ + + R P TF +LNAC
Sbjct: 389 L---DVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC--------- 436
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETMVER-DW 457
+H+ +V+ GL F D + S LID+ + G E+ E M + D
Sbjct: 437 --SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDD 494
Query: 458 VSWNAMIVGCAQNGY 472
WNA++ C +G+
Sbjct: 495 RVWNALLGVCRIHGH 509
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/705 (33%), Positives = 370/705 (52%), Gaps = 87/705 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C +S ++++H++II + F+ R++ VYA
Sbjct: 37 FNDLLQQCSKSHL---SQQIHSQIIVTGSHRSAFLAARVVSVYAG--------------- 78
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSEALGY 138
+G + DA R+F P + WNS++ H EAL
Sbjct: 79 ----------------FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEI 122
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M + ++F + ACA K+ VH + + + ++++G+ L+ MYGK
Sbjct: 123 YCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGK 182
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT---- 254
GR+ AR+VF+ M R+ VSWN++++ Y N A E+F M ++G+EP+ VT
Sbjct: 183 IGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242
Query: 255 -------------------------------LASVVSACASLAAFKEGLQIHARLMRCEK 283
LA V+S LAAF EG IH +++
Sbjct: 243 LSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG-G 301
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
N L + N+L+ +Y K G +N AR +F + +N+VS +++S YA A +F
Sbjct: 302 FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFL 361
Query: 344 K--------MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ M+ NVVSW+A+I G+ G+ EEAL LFR ++ V T ++L+ C
Sbjct: 362 QLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVC 421
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A LA L LGR+ H HVV+ S + +I VGN LI+MY K GS ++G +FE + +
Sbjct: 422 AELAALHLGREIHGHVVR------SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK 475
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +SWN M+ G +G G A+ F +M+ G +PD VT + VL ACSHAGLV EGR+ F
Sbjct: 476 DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELF 535
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
M KE + P +HY CMVDLLGRAG L EA ++++MP++P+A +WG+LL +C++H+N
Sbjct: 536 DKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKN 595
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E A ++ + +G Y+LLSN+YA GRW + +VR + +G+ K PG SWI+
Sbjct: 596 TEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
+ V +F + +H +E+Y +LK L +M+ GY+P+ +++
Sbjct: 656 VKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEGYIPDIDEEQ 700
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 224/494 (45%), Gaps = 81/494 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S R VH +++ F + + N L+ +Y K G + ARKVF
Sbjct: 134 DGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVF 193
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
++M+ ++ +WN++++G AS +F M E + +W S++S A+ +
Sbjct: 194 ERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHV 253
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
E + F +M + + LS F G +H + K + + +++ ++LI
Sbjct: 254 ETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLI 313
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY-------------------------- 227
+YGK G V+ AR +F ++ +NIVSWN+LI+ Y
Sbjct: 314 CLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVR 373
Query: 228 -------------EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
G +ALE+F RM + ++ + VT+ASV+S CA LAA G +I
Sbjct: 374 PNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREI 433
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H ++R + ++++GN L++MY K G E VF+++ ++++S +MV
Sbjct: 434 HGHVVR-SLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMV-------- 484
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
AGY +G E A+ F + ++ P TF +L+A
Sbjct: 485 -----------------------AGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSA 521
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-V 453
C++ + GR+ ++K F + + + ++D+ + G +++ ++ ++M V
Sbjct: 522 CSHAGLVAEGRELFDKMIK---EFRVEPQMEHYA--CMVDLLGRAGLLQEASKVVKSMPV 576
Query: 454 ERDWVSWNAMIVGC 467
E + W A++ C
Sbjct: 577 EPNACVWGALLNSC 590
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/462 (43%), Positives = 298/462 (64%), Gaps = 8/462 (1%)
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA-SLAAFKEGLQIHA 276
V+WN+LI+ + + G ++ FV M +G P VT SV+SAC G+Q+H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R++ L DL + NALVDMYA+C + A VFD M +R+VVS TS++SG A+ V
Sbjct: 148 RVVGSGVL-PDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVD 206
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
AR +F +M ER+ VSW A+I GY EAL +FR ++ +V +T +++ ACA
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
L L++G ++ + G++ D FVGN+LIDMY KCGS+E +F+ M RD
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKM------DAFVGNALIDMYSKCGSIERALDVFKGMHHRD 320
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+W A+I+G A NGY EA+ +F +M+ E PD VT IGVL AC+HAGLV++GR++F
Sbjct: 321 KFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFL 380
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
SM + + +AP HY C++DLLGRAG + EA I+ MPM P++ IWG+LLAAC+VH N
Sbjct: 381 SMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNS 440
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
+GE VA++LLE++P NS Y+LLSN+YA+ RW +V R+R + ++G+ K+PGCS IE+
Sbjct: 441 EIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEM 500
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
G ++ F+ D+ HP++KEIY L+ + ++ VGY P+ ++
Sbjct: 501 DGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTE 542
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 171/309 (55%), Gaps = 5/309 (1%)
Query: 13 DLAFLDSSP----FAKLLDSCLR-SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
D+A ++P + +L +C + ++ V +VH R++ S ++ ++N L+D+YA+C
Sbjct: 112 DMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAEC 171
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+ A KVFD M ++V +W S+++GL + G +D+A LF MPERD SW +M+ G+
Sbjct: 172 ADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYV 231
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
RF EAL F +M N + E++ S ++ACA +MG V +S+ D +
Sbjct: 232 WAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAF 291
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+ALIDMY KCG + A VF GM R+ +W ++I NG +A+E+F RM+
Sbjct: 292 VGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVS 351
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
PDEVT V++AC +G + ++ + ++V ++D+ + GK+ EA
Sbjct: 352 ETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEA 411
Query: 308 RCVFDRMPI 316
D+MP+
Sbjct: 412 LDTIDQMPM 420
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 175/392 (44%), Gaps = 80/392 (20%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA-GSVDFKMGTQVHAL 176
+WN+++SG + RF E+ G FV M A + ++ S LSAC G+ D +G QVH
Sbjct: 89 AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGR 148
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG----- 231
+ S D+ + +AL+DMY +C + A +VFDGM+ R++VSW SL++ + G
Sbjct: 149 VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEA 208
Query: 232 -------PASD-------------------ALEVFVRMMASGIEPDEVTLASVVSACASL 265
P D ALE+F M S + DE T+ SV++ACA L
Sbjct: 209 RDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQL 268
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A + G + + R + ++ D +GNAL+DMY+KCG + A VF M R+
Sbjct: 269 GALEMGEWVRVYMSR-QGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRD------- 320
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
FT W A+I G NG EEA+ +F + R S P
Sbjct: 321 ---------------KFT---------WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDE 356
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN-----SLIDMYMKCG 440
TF +L AC + + GR+ FLS E+ N +ID+ + G
Sbjct: 357 VTFIGVLTACTHAGLVDKGREF----------FLSMIEAYNIAPNVVHYGCIIDLLGRAG 406
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ + + M + + W ++ C +G
Sbjct: 407 KITEALDTIDQMPMTPNSTIWGTLLAACRVHG 438
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/534 (37%), Positives = 320/534 (59%), Gaps = 39/534 (7%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ S A + + + ++ACA S + ++HA L+ SR++ D ++ ++LI +Y KCG
Sbjct: 42 LDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGS 101
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A +VFD MR +++VSW SLI Y QN ++A+ + M+ +P+ T AS++ A
Sbjct: 102 VVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ A G QIHA ++C+ D+ +G+AL+DMYA+CGK++ A VFD
Sbjct: 162 VGAYADSGIGGQIHALAVKCD-WHEDVYVGSALLDMYARCGKMDMATAVFD--------- 211
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
K+ +N VSWNALI+G+ + G+ E AL +F ++R
Sbjct: 212 ----------------------KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGF 249
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
TH+T+ ++ +A A + L+ G+ H H++K S ++ FVGN+++DMY K GS
Sbjct: 250 EATHFTYSSIFSALAGIGALEQGKWVHAHMIK------SRQKLTAFVGNTMLDMYAKSGS 303
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D ++FE ++ +D V+WN+M+ AQ G G EA+ F++M G + ++ + +L A
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTA 363
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+EG+ YF M KE+ L P +HY +VDLLGRAG L+ A I MPM+P A
Sbjct: 364 CSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LLAAC++H+N +G++ A + +++P +SGP VLL N+YA G W RVRK+M+
Sbjct: 423 VWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMK 482
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
GV K+P CSW+EI V++F+ D HP +EIY + ++ ++++ GYVP+
Sbjct: 483 ATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 199/388 (51%), Gaps = 45/388 (11%)
Query: 13 DLAFLDSSPFAK-------LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
DL LDS A + +C +SK++ D R++HA + S+FA + F+ N LI +Y
Sbjct: 38 DLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYC 97
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG + A KV F M +D SW S+++G
Sbjct: 98 KCGSVVEAHKV-------------------------------FDKMRNKDMVSWTSLIAG 126
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+D +EA+G M F + ++F S L A D +G Q+HAL K + D
Sbjct: 127 YAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHED 186
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
VY+GSAL+DMY +CG++ A VFD + +N VSWN+LI+ + + G AL VF M
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G E T +S+ SA A + A ++G +HA +++ + V GN ++DMYAK G +
Sbjct: 247 NGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFV-GNTMLDMYAKSGSMI 305
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYT 361
+AR VF+R+ +++V+ SM++ +A+ K A F +M + N +S+ ++ +
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACS 365
Query: 362 QNGENEEALGLFRLLKRESVCP--THYT 387
G +E F ++K ++ P HY
Sbjct: 366 HGGLVKEGKHYFDMIKEYNLEPEIEHYV 393
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 32/187 (17%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA +IKS+ F+ N ++D+YAK G + ARKV
Sbjct: 275 VHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKV------------------------ 310
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
F + +D +WNSM++ FAQ+ EA+ +F +M L++ SF L+A
Sbjct: 311 -------FERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTA 363
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR-VFDGMRERNIVS 219
C+ K G ++ + ++ ++D+ G+ G ++ A +F E
Sbjct: 364 CSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAV 423
Query: 220 WNSLITC 226
W +L+
Sbjct: 424 WGALLAA 430
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/627 (36%), Positives = 357/627 (56%), Gaps = 36/627 (5%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N I YA+ G + AR+VFD+M +K + +WNS++ G + +A LF MPER+
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN ++SG+ ++ SEA F M N S + G V + ++ L
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMPERNVV-------SWTAMVRGYVQEGLVSEAETLF 132
Query: 178 ----SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
K+ S V +G + + R+ AR +FD M +++V+ ++I+ Y Q G
Sbjct: 133 WQMPEKNVVSWTVMLGGLI-----QVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRL 187
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--RLMRCEKLRNDLVLG 291
++A E+F DE+ +V+S ++ + + Q+ +L +N+ V
Sbjct: 188 AEARELF----------DEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNE-VSW 236
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
A++ Y + G++ EA +FD MP++ VV+ +M+ G+ + V AR +F ++ E++
Sbjct: 237 TAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDG 296
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
+W+A+I Y + G EAL LF L++RE V + ++L+ CA+LA L GRQ H +
Sbjct: 297 TWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAEL 356
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK S +SD+FV + LI MY+KCG + +IF+ +D V WN++I G AQ+G
Sbjct: 357 VK------SQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHG 410
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL +F +M G D VT +GVL ACS+ G V+EG + F SM ++ + P +HY
Sbjct: 411 LVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHY 470
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDLLGRAG +++A LI+ MP++ DA+IWG+LL AC+ H N+ L E AKKLL++EP
Sbjct: 471 ACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEP 530
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK-DKRH 650
N+GPY+LLSN+YA GRWG+V +R+ MR + V K PGCSWIE+ V++F +H
Sbjct: 531 KNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKH 590
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNAS 677
P I +L+ L ++ GY P++S
Sbjct: 591 PELSSIMKMLEKLDGMLREAGYYPDSS 617
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 89/422 (21%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
++ + +I Y + G L AR++FD+M +NV +W ++I+G ++ G +D A +LF MP
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP 229
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
E+++ SW +M+ G+ Q R EA F M + A+ AC
Sbjct: 230 EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK-----------AVVAC----------- 267
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+A+I +G+ G V+ AR+VFD +RE++ +W+++I YE+ G
Sbjct: 268 -----------------NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGF 310
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+AL +F M G++ + +L SV+S CASLA+ G Q+HA L++ + +D+ + +
Sbjct: 311 EVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQ-FDSDVFVAS 369
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
L+ MY KCG L +AR +FDR +++V S+++GYA
Sbjct: 370 VLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYA---------------------- 407
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
Q+G EEAL +F + + TF +L+AC ++T V
Sbjct: 408 ---------QHGLVEEALQVFHEMCSSGMATDGVTFVGVLSAC-----------SYTGKV 447
Query: 413 KHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
K GL +S V ++D+ + G V D + + M VE D + W A++
Sbjct: 448 KEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLG 507
Query: 466 GC 467
C
Sbjct: 508 AC 509
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 220/491 (44%), Gaps = 101/491 (20%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+NS I + G I+ A R+F MP++ SWNSMV+G+ Q++R EA F KM
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER 76
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N +V + + LI Y K VS A
Sbjct: 77 N-----------------TVSW----------------------NGLISGYVKNRMVSEA 97
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+ FD M ERN+VSW +++ Y Q G S+A +F +M P++ +VVS L
Sbjct: 98 RKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM------PEK----NVVSWTVML 147
Query: 266 AAFKEGLQI-HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ +I AR + D+V ++ Y + G+L EAR +FD MP RNV+S T+
Sbjct: 148 GGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SGY + V AR +F M E+N VSW A++ GYTQ G EEA LF + ++V
Sbjct: 208 MISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVV-- 265
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
AC N++I + + G V
Sbjct: 266 ---------AC----------------------------------NAMILGFGQNGEVAK 282
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
++F+ + E+D +W+AMI + G+ EAL LF M G + + ++I VL C+
Sbjct: 283 ARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCAS 342
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++ GR+ + + K + D + + ++ + + G L +A+ + + + D V+
Sbjct: 343 LASLDHGRQVHAELVKSQFDS---DVFVASVLITMYVKCGDLVKARQIFDRFSPK-DIVM 398
Query: 563 WGSLLAACKVH 573
W S++ H
Sbjct: 399 WNSIITGYAQH 409
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VHA ++KSQF S++F+ + LI +Y KCG L AR++FD+ S K+
Sbjct: 336 VLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD 395
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ WNSIITG +AQH EAL F +M S
Sbjct: 396 IVMWNSIITG-------------------------------YAQHGLVEEALQVFHEMCS 424
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
A +F LSAC+ + K G ++ ++ SK + ++D+ G+ G V+
Sbjct: 425 SGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVN 484
Query: 204 CARRVFDGMR-ERNIVSWNSLI 224
A + M E + + W +L+
Sbjct: 485 DAMDLIQKMPVEADAIIWGALL 506
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 37/312 (11%)
Query: 314 MPIRN-----VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
MP R ++ S ++ YA+ ++SAR +F +M ++ +VSWN+++AGY QN E
Sbjct: 6 MPCRRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPRE 65
Query: 369 ALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
A LF ++ +R +V G + N + A R+A F + E ++
Sbjct: 66 ARYLFDKMPERNTVSWNGLISGYVKNRMVSEA-----RKA----------FDTMPERNVV 110
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+++ Y++ G V + +F M E++ VSW M+ G Q EA GLF M +
Sbjct: 111 SWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPV-- 168
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
D V ++ G + E R+ F M + + ++ +T M+ + G +D A
Sbjct: 169 --KDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS-----WTTMISGYVQNGQVDVA 221
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ L E MP + + V W ++L I A +L + P + V + M
Sbjct: 222 RKLFEVMP-EKNEVSWTAMLMGYTQGGRI----EEASELFDAMPVKA--VVACNAMILGF 274
Query: 608 GRWGEVVRVRKL 619
G+ GEV + R++
Sbjct: 275 GQNGEVAKARQV 286
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 338/653 (51%), Gaps = 69/653 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F LL +C S + + H+ IIK + A +F+ N L+D+YAKCG L AR++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++M +++ TWN+II + Q + SEA
Sbjct: 486 FERMCDRDNVTWNTII-------------------------------GSYVQDENESEAF 514
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M+ S L AC G QVH L K D++ GS+LIDMY
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + AR+VF + E ++VS N+LI Y QN +A+ +F M+ G+ P E+T A
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFA 633
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++V AC + G Q H ++ + LG +L+ MY + EA +F +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL-- 691
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
SS KS +V W +++G++QNG EEAL ++ +
Sbjct: 692 ----------------SSPKS------------IVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + V P TF +L C+ L+ L+ GR H+ L F + D N+LIDMY
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS------LIFHLAHDLDELTSNTLIDMY 777
Query: 437 MKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCG ++ ++F+ M R + VSWN++I G A+NGY +AL +F M PD +T
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSHAG V +GRK F M ++G+ DH CMVDLLGR G L EA IEA
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PDA +W SLL AC++H + + GE A+KL+E+EP NS YVLLSN+YA G W +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+RK+MR RGV K PG SWI++ ++F DK H +I + L+ L MK
Sbjct: 958 LRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 169/596 (28%), Positives = 284/596 (47%), Gaps = 72/596 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+P + + DS + +S + + RI S I RL+++ L+ +RKVFD+
Sbjct: 8 TPSSAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDE 67
Query: 80 MSNKNVFTW--------NSIITGLLKWGFIDDA-SRLFA------------SMPERDQCS 118
M + S+I G+ G + +A L+A E+D +
Sbjct: 68 MPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA 127
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WNSM+S ++ + + L FV + ++++F LS CA + + G Q+H +
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K + Y G AL+DMY KC R+S ARRVF+ + + N V W L + Y + G +A+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
VF RM G PD + +V++ L K+ ARL+ E D+V N ++ +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKD-----ARLLFGEMSSPDVVAWNVMISGH 302
Query: 299 AKCG----------KLNEARCVFDRMPIRNVVSE-------------------------- 322
K G + ++ R + +V+S
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 323 ---TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+S+VS Y+K +++A +F + E+N V WNA+I GY NGE+ + + LF +K
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+TF +LL+ CA DL++G Q H+ ++K L ++FVGN+L+DMY KC
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL------AKNLFVGNALVDMYAKC 476
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ED +IFE M +RD V+WN +I Q+ +EA LFK+M LCG D + L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
AC+H + +G++ +S + GL + ++D+ + G + +A+ + ++P
Sbjct: 537 KACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ D D + F +L C S+ + R +H+ I + N LID+YAKC
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 68 GCLYGARKVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPE 113
G + G+ +VFD+M + NV +WNS+I G K G+ +DA ++F SM +
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/491 (42%), Positives = 303/491 (61%), Gaps = 43/491 (8%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ + LI+MY K G + A+ VFD M +RN+VSW ++I+ Y ALE V M+
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G+ P+ T +SV+ AC L + Q+H +++ L +D+ + +AL+D+Y++ G+L
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKI-GLDSDVFVRSALIDVYSRWGELEN 116
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A VFD MV+G ++V W+++IAG+ QN +
Sbjct: 117 ALRVFD-----------EMVTG--------------------DLVVWSSIIAGFAQNSDG 145
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+EAL LF+ +KR T ++L AC LA L+LGRQ H HV+K+ + D+
Sbjct: 146 DEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKY--------DQDL 197
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+ N+L+DMY KCGS+ED +F MVE+D +SW+ MI G AQNGY EAL LF+ M +
Sbjct: 198 ILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVL 257
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G KP++VT++GVL ACSHAGLVEEG YF SM + G+ P ++HY CM+DLLGRAG L E
Sbjct: 258 GIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSE 317
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A LI M +PDAV W +LL AC+VHRN+ + + AK++L ++P ++G YVLLSN+YA
Sbjct: 318 AVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYAN 377
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
RW +V VR+ M RG+ K+PGCSWIE+ ++ F++ D+ HP +EI + L L +
Sbjct: 378 TQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYK 437
Query: 667 MKRVGYVPNAS 677
+ VGYVP+ +
Sbjct: 438 LMGVGYVPDTN 448
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 43/383 (11%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
F N +I +K+G + DA +F MP+R+ SW +M+S ++ +AL + V M E
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ +++ S L AC G + + Q+H + K SDV++ SALID+Y + G + A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
RVFD M ++V W+S+I + QN +AL +F RM +G + TL SV+ AC L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A + G Q+H +++ ++ DL+L NAL+DMY KCG L +A VF RM ++V+S ++M
Sbjct: 178 ALLELGRQVHVHVLKYDQ---DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
++G A QNG ++EAL LF +K + P +
Sbjct: 235 IAGLA-------------------------------QNGYSKEALKLFESMKVLGIKPNY 263
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +L AC++ ++ G + H +K G E +ID+ + G + +
Sbjct: 264 VTIVGVLFACSHAGLVEEGLY-YFHSMKELFGIDPGREH----YGCMIDLLGRAGRLSEA 318
Query: 446 CRIFETM-VERDWVSWNAMIVGC 467
+ M E D V+W A++ C
Sbjct: 319 VDLINEMECEPDAVTWRALLNAC 341
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 147/293 (50%), Gaps = 36/293 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C + + R++H IIK S++F+++ LIDVY++
Sbjct: 69 YSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSR--------------- 110
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
WG +++A R+F M D W+S+++GFAQ+ EAL F +
Sbjct: 111 ----------------WGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKR 154
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + + S L AC G ++G QVH + K Y D+ + +AL+DMY KCG
Sbjct: 155 MKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGS 212
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF M E++++SW+++I QNG + +AL++F M GI+P+ VT+ V+ A
Sbjct: 213 LEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFA 272
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
C+ +EGL + + ++D+ + G+L+EA + + M
Sbjct: 273 CSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEM 325
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 328/578 (56%), Gaps = 39/578 (6%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D A LF + ++D ++N++++G+ + ++EA+ F+KM S+++F L A
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
G DF +G Q+H L + +S D +G+ ++ Y K RV R +F+ M E + VS+
Sbjct: 254 VVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSY 313
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N +I+ Y Q ++L +F M G + A+++S A+L++ + G Q+H + +
Sbjct: 314 NVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI- 372
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ L +GN+LVDMYAKC +EA L
Sbjct: 373 VATADSILHVGNSLVDMYAKCEMFDEAE-------------------------------L 401
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F + +R+ VSW ALI+GY Q G + L LF ++ ++ TF +L A A A
Sbjct: 402 IFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFAS 461
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L LG+Q H +++ SG ++F G+ L+DMY KCGS++D ++FE M +R+ VSW
Sbjct: 462 LLLGKQLHAFIIR------SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 515
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NA+I A NG G A+G F KM+ G +PD V+++GVL ACSH G VE+G ++F +MS
Sbjct: 516 NALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSP 575
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+G+ P K HY CM+DLLGR G EA+ L++ MP +PD ++W S+L AC++++N L E
Sbjct: 576 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAE 635
Query: 581 YVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
A++L +E ++ YV +SN+YA G+W V V+K MR+RG+ K P SW+E+
Sbjct: 636 RAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHK 695
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++VF D+ HP EI + LT E++R GY P+ S
Sbjct: 696 IHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTS 733
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 274/535 (51%), Gaps = 44/535 (8%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
TRRV ARIIK+ F ++ N ++ + G + A KV+D+M +KN + N++I+G +K
Sbjct: 28 TRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVK 87
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY-SFGS 156
G + A LF +MP+R +W ++ +A ++ F EA F +M + L +Y +F +
Sbjct: 88 MGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM-CRSCTLPDYVTFTT 146
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDMYGKCGRVSCARRVFDGMRE 214
L C +V QVHA K + +++++ + L+ Y + R+ A +F+ + +
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++ V++N+LIT YE++G ++A+ +F++M SG +P + T + V+ A L F G Q+
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQL 266
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H L D +GN ++ Y+K ++ E R +F+ MP + VS
Sbjct: 267 HG-LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVS------------- 312
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
NVV I+ Y+Q + EE+L LFR ++ ++ F +L+
Sbjct: 313 -------------YNVV-----ISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSI 354
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
ANL+ LQ+GRQ H + ++ +S + VGNSL+DMY KC ++ IF+++ +
Sbjct: 355 AANLSSLQVGRQVHCQAI------VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQ 408
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
R VSW A+I G Q G L LF KM + D T VL A + + G++
Sbjct: 409 RSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQL 468
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + L + + +VD+ + G + +A + E MP + +AV W +L++A
Sbjct: 469 HAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 521
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 200/474 (42%), Gaps = 88/474 (18%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N I+ K + + LF MPE D S+N ++S ++Q +++ E+L F +M F
Sbjct: 283 NQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFD 342
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ F + LS A ++G QVH + S +++G++L+DMY KC A +
Sbjct: 343 RRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELI 402
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F + +R+ VSW +LI+ Y Q G L++F +M + + D+ T A+V+ A A A+
Sbjct: 403 FKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASL 462
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G Q+HA ++R L N + G+ LVDMYAKCG + +A VF+ MP RN VS +++S
Sbjct: 463 LLGKQLHAFIIRSGNLEN-VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 521
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
YA NG+ E A+G F + + + P +
Sbjct: 522 YA-------------------------------DNGDGEAAIGAFTKMIQSGLQPDSVSI 550
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L AC++ CG VE G
Sbjct: 551 LGVLIACSH-----------------------------------------CGFVEQGTEF 569
Query: 449 FETMVERDWVSWNAMIVGC-----AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC- 502
F+ M ++ C +NG EA L +M +PD + VL AC
Sbjct: 570 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF---EPDEIMWSSVLNACR 626
Query: 503 --SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ L E + SM K A Y M ++ AG + + + +AM
Sbjct: 627 IYKNQSLAERAAEQLFSMEKLRDAAA----YVSMSNIYAAAGKWENVRHVKKAM 676
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 31/296 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA +L S+ R+VH + I + S + + N L+D+YAKC A +F +
Sbjct: 347 PFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSL 406
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S ++ +W ++I SG+ Q L F
Sbjct: 407 SQRSTVSWTALI-------------------------------SGYVQKGLHGAGLKLFT 435
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM N + +F + L A AG +G Q+HA + +S +V+ GS L+DMY KCG
Sbjct: 436 KMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 495
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF+ M +RN VSWN+LI+ Y NG A+ F +M+ SG++PD V++ V+
Sbjct: 496 SIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLI 555
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ ++G + + + ++D+ + G+ EA + D MP
Sbjct: 556 ACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 611
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 121/309 (39%), Gaps = 79/309 (25%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S FA +L + S+ +++HA II+S +F + L+D+YAKCG + A +VF
Sbjct: 445 DQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 504
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++N +WN++I S +A + A+G
Sbjct: 505 EEMPDRNAVSWNALI-------------------------------SAYADNGDGEAAIG 533
Query: 138 YFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMGS 190
F KM S L AC+ G+ F+ + ++ + K ++ +
Sbjct: 534 AFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHY------A 587
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++D+ G+ GR + A ++ D M EP
Sbjct: 588 CMLDLLGRNGRFAEAEKLMDEM----------------------------------PFEP 613
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DE+ +SV++AC + +L EKLR D ++ ++YA GK R V
Sbjct: 614 DEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLR-DAAAYVSMSNIYAAAGKWENVRHV 672
Query: 311 FDRMPIRNV 319
M R +
Sbjct: 673 KKAMRERGI 681
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/703 (32%), Positives = 364/703 (51%), Gaps = 119/703 (16%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N+L+ +K G + ARK+FD+M ++ +TWN +I+ G + +A +LF P ++
Sbjct: 41 NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSI 100
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
+W+S+VSG+ ++ E L F +M S+ S+Y+ GS L AC+ G +H
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDA 236
K + +++++ + L+DMY KC + A +F + +R N V W +++T Y QNG + A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
++ F M G+E + T S+++AC S++A+ G Q+H ++ ++ + +ALVD
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCII-WSGFGPNVYVQSALVD 279
Query: 297 MYAKC-------------------------------GKLNEARCVFDRMPIRNV------ 319
MYAKC G + EA +F +M R++
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339
Query: 320 ---------------------------------VSETSMVSGYAKASSVKSARLMFTKML 346
++V YAK ++ A +F K+L
Sbjct: 340 YPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+++V+SW +L+ GY NG +E+AL LF ++ V + + +ACA L ++ GRQ
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H + +K S S + NSLI MY KCG +ED R+F++M R+ +SW A+IVG
Sbjct: 460 VHANFIK------SSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVG 513
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQNG LVE G+ YF SM K +G+ P
Sbjct: 514 YAQNG-----------------------------------LVETGQSYFESMEKVYGIKP 538
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
DHY CM+DLLGRAG ++EA+ L+ M ++PDA IW SLL+AC+VH N+ LGE K L
Sbjct: 539 ASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNL 598
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
+++EPSNS PYVLLSNM++ GRW + +R+ M+ G+ K+PG SWIE+ V+ F+ +
Sbjct: 599 IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISE 658
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
D+ HPL EIY + + +K G+VP+ + D+EA E
Sbjct: 659 DRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKE 701
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 220/436 (50%), Gaps = 47/436 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + + R+VH II S F +++Q+ L+D+YAKCG L AR + D M
Sbjct: 239 FPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V WNS+I G + G++++A LF K
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFH-------------------------------K 327
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH+ + + ++++ S L + A + K+G VH+L K+ + + + +AL+DMY K G
Sbjct: 328 MHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGN 387
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+SCA VF+ + +++++SW SL+T Y NG AL++F M + ++ D+ +A V SA
Sbjct: 388 LSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSA 447
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L + G Q+HA ++ + L N+L+ MYAKCG L +A VFD M RNV+S
Sbjct: 448 CAELTVIEFGRQVHANFIK-SSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVIS 506
Query: 322 ETSMVSGYAKASSVKSARLMFTKM-----LERNVVSWNALIAGYTQNGENEEALGLFRLL 376
T+++ GYA+ V++ + F M ++ + +I + G+ EA LL
Sbjct: 507 WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAE---HLL 563
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R V P + +LL+AC +L+LG +A +++K E S+ L +M+
Sbjct: 564 NRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKL-------EPSNSLPYVLLSNMF 616
Query: 437 MKCGSVEDGCRIFETM 452
G ED I M
Sbjct: 617 SVAGRWEDAAHIRRAM 632
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 128/301 (42%), Gaps = 68/301 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + +L S K++ VH+ IK+ F + + N L+D+YAK G L A V
Sbjct: 335 IDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDV 394
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+K+ +K+V +W S++TG + GF H++ AL
Sbjct: 395 FNKILDKDVISWTSLVTGYVHNGF----------------------------HEK---AL 423
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M + L ++ SACA + G QVHA KS S + ++LI MY
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTL 255
KCG + A RVFD M RN++SW ++I Y QNG F M GI+P
Sbjct: 484 AKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP----- 538
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AS AC ++D+ + GK+NEA + +RM
Sbjct: 539 ASDHYAC-------------------------------MIDLLGRAGKINEAEHLLNRMD 567
Query: 316 I 316
+
Sbjct: 568 V 568
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A + +C + R+VHA IKS S + +N LI +YAKCGCL A +V
Sbjct: 436 LDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRV 495
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM-------PERDQCSWNSMVSGFAQH 129
FD M +NV +W +II G + G ++ F SM P D + M+ +
Sbjct: 496 FDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDH--YACMIDLLGRA 553
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV-YM 188
+ +EA +M E A + S LSAC + ++G + L K S+ + Y+
Sbjct: 554 GKINEAEHLLNRMDVEPDAT---IWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYV 610
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNI 217
L +M+ GR A + M+ I
Sbjct: 611 --LLSNMFSVAGRWEDAAHIRRAMKTMGI 637
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/583 (36%), Positives = 340/583 (58%), Gaps = 12/583 (2%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A +LF +PE D WN+M+ G+++ D E + ++ M E ++F L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 159 SAC---AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ G++ G ++H + K S++Y+ +AL+ MY CG + AR VFD +
Sbjct: 142 NGLKRDGGAL--ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++ SWN +I+ Y + +++E+ V M + + P VTL V+SAC+ + ++H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C K L L NALV+ YA CG+++ A +F M R+V+S TS+V GY + ++
Sbjct: 260 EYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K AR F +M R+ +SW +I GY + G E+L +FR ++ + P +T ++L AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+L L++G T++ K+ ++ +D+ VGN+LIDMY KCG E ++F M +R
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIK------NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +W AM+VG A NG G EA+ +F +M +PD +T +GVL AC+H+G+V++ RK+F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ M +H + P HY CMVD+LGRAG + EA ++ MPM P++++WG+LL A ++H +
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E AKK+LE+EP N Y LL N+YA RW ++ VR+ + + K PG S IE
Sbjct: 553 EPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+ G + F+ DK H ++EIY+ L+ L +E Y+P+ S+
Sbjct: 613 VNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSE 655
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 157/292 (53%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + K +RVH + + + + ++N L++ YA CG + A ++F M ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +W SI+ G ++ G + A F MP RD+ SW M+ G+ + F+E+L F +M S
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E++ S L+ACA ++G + + K++ +DV +G+ALIDMY KCG
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A++VF M +R+ +W +++ NG +A++VF +M I+PD++T V+SAC
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + A++ ++ LV +VDM + G + EA + +MP+
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 231/522 (44%), Gaps = 115/522 (22%)
Query: 18 DSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F LL+ R +++ +++H ++K S +++QN L+ +Y+ CG + AR V
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ ++VF+WN M+SG+ + + E++
Sbjct: 193 FDRRCKEDVFSWN-------------------------------LMISGYNRMKEYEESI 221
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
V+M + + + LSAC+ D + +VH +S+ + + + +AL++ Y
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD--------- 235
CG + A R+F M+ R+++SW S++ Y + G P D
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 236 ----------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+LE+F M ++G+ PDE T+ SV++ACA L + + G I + + K++
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIK 400
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
ND+V+GNAL+DMY KCG +A+ VF M R+ + T+MV G A
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA--------------- 445
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
NG+ +EA+ +F ++ S+ P T+ +L+AC
Sbjct: 446 ----------------NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC---------- 479
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWV 458
H+ +V +F + SD + SL +DM + G V++ I M + + +
Sbjct: 480 -NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
W A++ A + E + + +PD+ + +LC
Sbjct: 539 VWGALL--GASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/660 (34%), Positives = 347/660 (52%), Gaps = 72/660 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ PF +L +C ++ D +H+ S++F+ L+D YAKCG L
Sbjct: 111 TYPF--VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV------- 161
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+A RLF+SM RD +WN+M++G + + +A+
Sbjct: 162 ------------------------EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
++M E + + L + G +H + + + V +G+ L+DMY K
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLAS 257
C + AR++FD M RN VSW+++I Y + +ALE+F +M + ++P VTL S
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA L G ++H +++ + D++LGN L+ MYAKCG
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGSVL-DILLGNTLLSMYAKCG--------------- 361
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ A F +M ++ VS++A+++G QNG AL +FR+++
Sbjct: 362 ----------------VIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P T +L AC++LA LQ G HG + G +D + N+LIDMY
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHG------FCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + +F M D VSWNAMI+G +G G EALGLF +L G KPD +T I
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L +CSH+GLV EGR +F +MS++ + P +H CMVD+LGRAG +DEA I MP +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD IW +LL+AC++H+NI LGE V+KK+ + P ++G +VLLSN+Y+ GRW + +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ G+ K PGCSWIEI G V+ F+ D+ H +I L+ L EMKR+GY S
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 170/597 (28%), Positives = 291/597 (48%), Gaps = 84/597 (14%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L F + + LL++C++SKS+++ +++H +K+ ++ + ++L +Y C + A
Sbjct: 3 LRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLA 62
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R++FD++ N +V WN ++ +A + F
Sbjct: 63 RRLFDEIPNPSVIL-------------------------------WNQIIRAYAWNGPFD 91
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A+ + M ++Y++ L AC+G + + G ++H+ SDV++ +AL+
Sbjct: 92 GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALV 151
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCG + A+R+F M R++V+WN++I G DA+++ ++M GI P+
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ V+ A G +H +R N +V+G L+DMYAKC L AR +FD
Sbjct: 212 TIVGVLPTVGEAKALGHGKALHGYCVR-RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDV 270
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M +RN VS ++M+ GY + +K A +F +M+ ++ +
Sbjct: 271 MGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD--------------------- 309
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
PT T G++L ACA L DL GR+ H +++K G DI +GN+L+
Sbjct: 310 ---------PTPVTLGSVLRACAKLTDLSRGRKLHCYIIK------LGSVLDILLGNTLL 354
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY KCG ++D R F+ M +D VS++A++ GC QNG AL +F+ M L G PD
Sbjct: 355 SMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLT 414
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK----DHYTC--MVDLLGRAGCLDEA 547
TM+GVL ACSH ++ G F S HG ++ D C ++D+ + G + A
Sbjct: 415 TMLGVLPACSHLAALQHG---FCS----HGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIM--LGEYVAKKLLEIEPSNSGPYVLLSN 602
+ + M + D V W +++ +H M LG + L ++P + LLS+
Sbjct: 468 REVFNRMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 208/457 (45%), Gaps = 80/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+SS +L + +K++ + +H ++ F + + + L+D+YAKC CL ARK+F
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIF 268
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M +N +W+++I G + + +A LF M +D
Sbjct: 269 DVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDA--------------------- 307
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + GS L ACA D G ++H + K D+ +G+ L+ MY
Sbjct: 308 ---------MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A R FD M ++ VS++++++ QNG A+ AL +F M SGI+PD T+
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ LAA + G H L+ D ++ NAL+DMY+KCGK++ AR VF+RM
Sbjct: 419 VLPACSHLAALQHGFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++V SWNA+I GY +G EALGLF L
Sbjct: 478 DIV-------------------------------SWNAMIIGYGIHGLGMEALGLFHDLL 506
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------ 431
+ P TF LL++C +H+ +V G + D +
Sbjct: 507 ALGLKPDDITFICLLSSC-----------SHSGLVMEGRLWFDAMSRDFSIVPRMEHCIC 555
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ M E D W+A++ C
Sbjct: 556 MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 592
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/539 (38%), Positives = 324/539 (60%), Gaps = 12/539 (2%)
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
K G +++A ++F + RD SW SM+S +A + EAL + +M ++ +F S
Sbjct: 4 KCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTS 63
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
AL AC D G +HA + S SD ++GSALI+MY +CG VS AR+ F+ ++ ++
Sbjct: 64 ALLACTKLAD---GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKH 119
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+V W SL+T Y Q G +AL+++ RM G+ D VT + + ACASL A KEG IH
Sbjct: 120 VVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHL 179
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R+ C LV+ AL+ MYAKCG+L+ AR VF+R+ NV + ++V+ YAK S++
Sbjct: 180 RVSECG--FQSLVVHTALLTMYAKCGELDAARAVFNRLA-SNVAVQNALVTMYAKCGSLE 236
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
A+ F +++VSWNA+I Y Q+G EAL L++ + + V P T + L+ACA
Sbjct: 237 LAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACA 296
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
LQLGR+ H+ V+K+ +S + V +L++MY +CG +E +FE M +RD
Sbjct: 297 ISGSLQLGREIHSRVLKN-----QSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRD 351
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+SW AM AQ G+ + L L+ +M+L G +P+ +T +L CSHAGL+ G + F
Sbjct: 352 VLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFL 411
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M EH + P+++H+ CMVDLLGR+G L +A+ L+E+MP QPD+V W ++L +CK H +
Sbjct: 412 EMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDA 471
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ A+++ E++P N+ Y LLS+++ G E + V+ M++ G+ K PG S IE
Sbjct: 472 DTAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 215/423 (50%), Gaps = 62/423 (14%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKCG V AR+VFDG++ R+ VSW S+I+ Y NG +AL+++ +M A GI+PD +T
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S + AC LA +G IHAR++ + +D V G+AL++MYA+CG ++ AR F+++
Sbjct: 61 FTSALLACTKLA---DGKAIHARIVS-SNMESDFV-GSALINMYARCGDVSSARQAFEKI 115
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
++VV TS L+ Y Q G EAL L+
Sbjct: 116 QNKHVVCWTS-------------------------------LMTAYVQTGHYREALDLYG 144
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL------------SGE 422
+ E V T+ L ACA+L L+ G+ H V + G + L GE
Sbjct: 145 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGE 204
Query: 423 -----------ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
S++ V N+L+ MY KCGS+E FE +D VSWNAMI AQ+G
Sbjct: 205 LDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHG 264
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
G EAL L++ M G PD VT+ L AC+ +G ++ GR+ S + K
Sbjct: 265 LGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQ 324
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA--ACKVHRNIMLGEYVAKKLLEI 589
T +V++ GR G L+ A+++ E M Q D + W ++ + A + H + +L Y+ L I
Sbjct: 325 TALVNMYGRCGRLETARSMFEDMG-QRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGI 383
Query: 590 EPS 592
P+
Sbjct: 384 RPN 386
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 258/530 (48%), Gaps = 69/530 (13%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q+ D DS F L +C + ++D + +HARI+ S S+ F+ + LI++YA+C
Sbjct: 47 QQMDADGIQPDSITFTSALLACTK---LADGKAIHARIVSSNMESD-FVGSALINMYARC 102
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMV 123
G + AR+ F+K+ NK+V W S++T ++ G +A L+ M D ++ + +
Sbjct: 103 GDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTAL 162
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRY 182
A +LG + + + +SE F S + A + K G A +R
Sbjct: 163 GACA-------SLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRL 215
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
+S+V + +AL+ MY KCG + A+ F+ +++VSWN++I Y Q+G +AL+++
Sbjct: 216 ASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQT 275
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M + G+ PDEVT+AS +SACA + + G +IH+R+++ + ++ L++ ALV+MY +CG
Sbjct: 276 MTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCG 335
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+L AR +F+ M R+V+S W A+ + Y Q
Sbjct: 336 RLETARSMFEDMGQRDVLS-------------------------------WTAMTSVYAQ 364
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG------RQAHTHVVKHGL 416
G ++ L L+ + + P TF ++L C++ L G Q+ VV
Sbjct: 365 QGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIRE 424
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTE 475
FL ++D+ + G + D + E+M + D V+W ++ C +
Sbjct: 425 HFL-----------CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADT 473
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCAC-SHAGLVEEGRKYFSSMSKEHGL 524
A +++ P++ ++ +L + + AGL +E + SM KE GL
Sbjct: 474 AKRAARRVKEL--DPENTSLYSLLSSIFTAAGLPQEALEVQLSM-KEMGL 520
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 352/660 (53%), Gaps = 77/660 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C ++V+D ++H +K F ++++ LI +Y C YGA
Sbjct: 152 DYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLY----CRYGA---- 200
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +A LF MP RD SWN+M+SG+ Q EAL
Sbjct: 201 -----------------------VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL- 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ A+ + S LSAC + DF G +H+ K S++++ + LID+Y
Sbjct: 237 ---TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + ++VFD M R+++SWNS+I YE N A+ +F M S I+PD +TL S
Sbjct: 294 EFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS 353
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S + L + + +R D+ +GNA+V MYAK G
Sbjct: 354 LASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-------------- 399
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V SAR +F + ++V+SWN +I+GY QNG EA+ ++ +++
Sbjct: 400 -----------------VDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 378 RE--SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
E + T+ ++L AC+ L+ G + H ++K+GL D+FVG SL DM
Sbjct: 443 EEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL------DVFVGTSLADM 496
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG ++D +F + + V WN +I +G+G +A+ LFK+ML G KPDH+T
Sbjct: 497 YGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 556
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSH+GLV+EG F M ++G+ P HY CMVDL GRAG L+ A I++MP
Sbjct: 557 VTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMP 616
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+QPDA IWG+LL+AC+VH N+ LG+ ++ L E+EP + G +VLLSNMYA G+W V
Sbjct: 617 LQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDE 676
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R + +G+ K PG S +E+ V VF ++ HP+ +E+Y L L ++K VGYVP+
Sbjct: 677 IRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPD 736
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 276/566 (48%), Gaps = 82/566 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HAR++ S + I +L+++Y G + AR FD + N++V+ WN +I+G + G+
Sbjct: 73 LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ R F+ M+S Q D +F S L A
Sbjct: 133 SSEVIRCFSLF----------MLSSGLQPDY--------------------RTFPSVLKA 162
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C D G ++H L K + DVY+ ++LI +Y + G V AR +FD M R++ SW
Sbjct: 163 CRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSW 219
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLM 279
N++I+ Y Q+G A +AL ++ G+ D VT+ S++SAC F G+ IH+ +
Sbjct: 220 NAMISGYCQSGNAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ L ++L + N L+D+YA+ G L + + VFDRM +R+++S
Sbjct: 275 K-HGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLIS------------------ 315
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
WN++I Y N + A+ LF+ ++ + P T +L + + L
Sbjct: 316 -------------WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+++ R ++ G FL DI +GN+++ MY K G V+ +F + +D +S
Sbjct: 363 EIRACRSVQGFTLRKGW-FL----EDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVIS 417
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEK--PDHVTMIGVLCACSHAGLVEEGRKYFSS 517
WN +I G AQNG+ +EA+ ++ M G + + T + VL ACS AG + +G K
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGR 477
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
+ K +GL T + D+ G+ G LD+A +L +P + ++V W +L+A H +
Sbjct: 478 LLK-NGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGE 535
Query: 578 LGEYVAKKLLE--IEPSNSGPYVLLS 601
+ K++L+ ++P + LLS
Sbjct: 536 KAVMLFKEMLDEGVKPDHITFVTLLS 561
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 224/486 (46%), Gaps = 84/486 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS LL +C + + +H+ IK SE+F+ N+LID+YA+ G L +KV
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKV 304
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M +++ +WNSII + P R + M Q D +
Sbjct: 305 FDRMYVRDLISWNSIIK-----------AYELNEQPLRAILLFQEMRLSRIQPDCLT--- 350
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ + S L E + AC F L K + D+ +G+A++ MY
Sbjct: 351 --LISLASILSQLGE------IRACRSVQGFT--------LRKGWFLEDITIGNAVVVMY 394
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVT 254
K G V AR VF+ + ++++SWN++I+ Y QNG AS+A+E++ M G I ++ T
Sbjct: 395 AKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGT 454
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
SV+ AC+ A ++G+++H RL++ L D+ +G +L DMY KCG+L++A +F ++
Sbjct: 455 WVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P N V ++ IA + +G E+A+ LF+
Sbjct: 514 PRVNSVPWNTL-------------------------------IACHGFHGHGEKAVMLFK 542
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL-- 432
+ E V P H TF LL+AC +H+ +V G ++D + SL
Sbjct: 543 EMLDEGVKPDHITFVTLLSAC-----------SHSGLVDEGEWCFEMMQTDYGITPSLKH 591
Query: 433 ----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+D+Y + G +E ++M ++ D W A++ C +G LG L
Sbjct: 592 YGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRV--HGNVDLGKIASEHLFE 649
Query: 488 EKPDHV 493
+P+HV
Sbjct: 650 VEPEHV 655
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 27/337 (8%)
Query: 297 MYAKCGKLNEARCVFDRM----PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++ C L A+C+ R+ I+NV +V+ Y +V AR F + R+V +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYA 119
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WN +I+GY + G + E + F L S + P + TF ++L AC N+ D G + H
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLA 176
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K G + D++V SLI +Y + G+V + +F+ M RD SWNAMI G Q+G
Sbjct: 177 LKFGFMW------DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSG 230
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL L + D VT++ +L AC+ AG G S S +HGL
Sbjct: 231 NAKEALTLSDGL----RAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVS 285
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH----RNIMLGEYVAKKLL 587
++DL G L + + + + M ++ D + W S++ A +++ R I+L + +L
Sbjct: 286 NKLIDLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAILL--FQEMRLS 342
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
I+P + + L+++ ++LG V+ ++G
Sbjct: 343 RIQP-DCLTLISLASILSQLGEIRACRSVQGFTLRKG 378
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 337/606 (55%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +FA++ E +Q WN+M+ G+A AL +V M S + Y+F L +CA
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S F+ G Q+H + K Y D+Y+ ++LI MY + GR+ A +VFD R++VS
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
WN++I+ Y + G +ALE+F MM + + PDE
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ +V+SACA + + G Q+H+ + ++L + NAL+D+Y+KCG+
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHS-WIDDHGFGSNLKIVNALIDLYSKCGQ--------- 248
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V++A +F + ++VVSWN LI GYT +EAL L
Sbjct: 249 ----------------------VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 286
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K L+ ++ S + SL
Sbjct: 287 FQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKK-LKDVTNAPS---LRTSL 342
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F +M+ + SWNAMI G A +G LF +M G +PD
Sbjct: 343 IDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDD 402
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSH+G ++ GR F SM++++ + P +HY CM+DLLG +G EAK +I+
Sbjct: 403 ITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIK 462
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM+PD VIW SLL AC+ H N+ L E A+ L+++EP N G YVLLSN+YA G W E
Sbjct: 463 TMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDE 522
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V +VR L+ +G+ K PGCS IEI V+ F+V DK HP N+EIY +L+ + ++ G+
Sbjct: 523 VAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGF 582
Query: 673 VPNASD 678
VP+ S+
Sbjct: 583 VPDTSE 588
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 241/460 (52%), Gaps = 46/460 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +SK+ + +++H ++K + ++++ LI +YA+ G L A KVF
Sbjct: 65 NSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVF 124
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ S+++V ++ ++ITG G I A +F +P +D SWN+M+SG+A+ + EAL
Sbjct: 125 DRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALE 184
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N E + + LSACA S ++G QVH+ + + S++ + +ALID+Y
Sbjct: 185 LFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYS 244
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V A +F+G+ +++VSWN+LI Y +AL +F M+ SG P++VT+ S
Sbjct: 245 KCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVS 304
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + + + + N L +L+DMYAKCG + A VF+
Sbjct: 305 ILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN---- 360
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
ML +++ SWNA+I G+ +G LF +
Sbjct: 361 ---------------------------SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG----NSL 432
++ + P TF LL+AC++ L LGR H+ K ++ DI +
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGR----HIFKS-----MTQDYDITPKLEHYGCM 444
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
ID+ G ++ + +TM +E D V W +++ C ++G
Sbjct: 445 IDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHG 484
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/526 (40%), Positives = 321/526 (61%), Gaps = 8/526 (1%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F L ACA + G V + + +DV++ +A + C ++ AR++FDG
Sbjct: 122 TFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGS 181
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEG 271
R++VSWN+LI Y + G +ALE+F RM+ G + PDEVT+ VVS A L + G
Sbjct: 182 HVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELG 241
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
++H + +R + L N ++DMY KCG L A+ VF+ + + +VS T+M+ GYA+
Sbjct: 242 RRLHG-YVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQ 300
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ AR +F +M ER+V WNAL+ GY Q +EAL LF ++ V P T NL
Sbjct: 301 FGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNL 360
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L+AC+ L L++G H ++ + + + +G +L+DMY KCG++E R+F+
Sbjct: 361 LSACSQLGALEMGMWVHHYIDRRRVSL------SVMLGTNLVDMYSKCGNIEKAIRVFKE 414
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ E++ ++W AMI G A +G+ A+ F++M+ G +PD +T IGVL AC HAGLV+EG
Sbjct: 415 IPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEG 474
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+++FS M ++ L HY+CMVDLLGRAG LDEA+ L+ MPM+PDAV+WG+L AC+
Sbjct: 475 QEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACR 534
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H NI LGE A KL+E++P +SG YVLL+NMYAE + +VR +MR GV K PGC
Sbjct: 535 MHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGC 594
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
S IE+ G V+ F+VKDK H IY L +T +++ + + S
Sbjct: 595 SCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTANMIDTS 640
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 154/278 (55%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
RR+H + + + N ++D+Y KCG L A+ VF+ + K + +W ++I G ++
Sbjct: 242 RRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQF 301
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G +DDA ++F MPERD WN++++G+ Q R EAL F M + + + L
Sbjct: 302 GLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLL 361
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SAC+ +MG VH + + R S V +G+ L+DMY KCG + A RVF + E+N +
Sbjct: 362 SACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNAL 421
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+W ++I+ +G A A++ F RM+ G++PDE+T V+SAC KEG + + +
Sbjct: 422 TWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLM 481
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ L + + +VD+ + G L+EA + + MP+
Sbjct: 482 VSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPM 519
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 206/492 (41%), Gaps = 111/492 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL +C R + + V ++ F +++F+ N + A C + ARK+F
Sbjct: 119 DHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLF 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D +++ +WN++I G ++ G +A +F W + G D
Sbjct: 179 DGSHVRDLVSWNTLIGGYVRRGVPREALEMF----------WRMVGDGAVTPD------- 221
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
E + +S A D ++G ++H + V + + ++DMY
Sbjct: 222 -------------EVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYI 268
Query: 198 KCGRV-------------------------------SCARRVFDGMRERNIVSWNSLITC 226
KCG + AR+VFD M ER++ WN+L+T
Sbjct: 269 KCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTG 328
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q +AL +F M + +EPD++T+ +++SAC+ L A + G+ +H + R ++
Sbjct: 329 YVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDR-RRVSL 387
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++LG LVDMY+KCG + +A VF +P +N ++ T+M+SG A A F +M+
Sbjct: 388 SVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMI 447
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E LGL P TF +L+AC
Sbjct: 448 E----------------------LGL---------QPDEITFIGVLSAC----------- 465
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVS 459
H +VK G F S S + ++D+ + G +++ + TM +E D V
Sbjct: 466 CHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVV 525
Query: 460 WNAMIVGCAQNG 471
W A+ C +G
Sbjct: 526 WGALFFACRMHG 537
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 13/257 (5%)
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
T G L L+ L R S P H TF LL ACA L + G +V+ G
Sbjct: 97 TDRGLVTRCLPLYCSLLR-SARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGF---- 151
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
+D+FV N+ + C S+ + ++F+ RD VSWN +I G + G EAL +F
Sbjct: 152 --HADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMF 209
Query: 481 KKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
+M+ G PD VTMIGV+ + +E GR+ + HG+ ++D+
Sbjct: 210 WRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRR-LHGYVESHGVRCTVRLMNVVMDMYI 268
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
+ G L+ AK++ E + + V W +++ + L + K E+ + P+
Sbjct: 269 KCGDLERAKSVFEGID-KKTIVSWTTMIVG---YAQFGLMDDARKVFDEMPERDVFPWNA 324
Query: 600 LSNMYAELGRWGEVVRV 616
L Y + R E +R+
Sbjct: 325 LMTGYVQCKRGKEALRL 341
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/676 (34%), Positives = 357/676 (52%), Gaps = 76/676 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D F S +A L+D+ + + ++H R++ S F+ +L++ + G +
Sbjct: 50 DHCFNSDSFYASLIDNSTHKRHLD---QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICY 106
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARK+FD+ +VF W N+++ +++++ +
Sbjct: 107 ARKLFDEFCYPDVFMW-------------------------------NAIIRSYSRNNMY 135
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+ + + M ++F L AC +DF + +H + K + SDV++ + L
Sbjct: 136 RDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGL 195
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ +Y KCG + A+ VFDG+ R IVSW S+I+ Y QNG A +AL +F +M +G++PD
Sbjct: 196 VALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDW 255
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+ L S++ A + ++G IH +++ L ++ L +L YAKCG
Sbjct: 256 IALVSILRAYTDVDDLEQGRSIHGFVIKM-GLEDEPALLISLTAFYAKCGL--------- 305
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V A+ F +M NV+ WNA+I+GY +NG EEA+ L
Sbjct: 306 ----------------------VTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNL 343
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + ++ P T + + A A + L+L + +V K S SDIFV SL
Sbjct: 344 FHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSK------SNYGSDIFVNTSL 397
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCGSVE R+F+ ++D V W+AMI+G +G G EA+ L+ M G P+
Sbjct: 398 IDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPND 457
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT IG+L AC+H+GLV+EG + F M K+ + P +HY+C+VDLLGRAG L EA I
Sbjct: 458 VTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIM 516
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
+P++P +WG+LL+ACK++R + LGEY A KL ++P N+G YV LSN+YA W
Sbjct: 517 KIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDC 576
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V VR LMR++G+ K G S IEI G + F V DK HP+ KEI+ L+ L R +K VG+
Sbjct: 577 VAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGF 636
Query: 673 VPNASD---DEAYEEQ 685
VP D YEE+
Sbjct: 637 VPYTESVLHDLNYEEK 652
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 210/446 (47%), Gaps = 43/446 (9%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGS---ALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+F + L + +H E+F ++ F S S S + Q+H L S + +
Sbjct: 30 KFVKYLCFSSALHPEHFVNHDHCFNSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGF 89
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ + L++ G++ AR++FD ++ WN++I Y +N D +E++ M +G
Sbjct: 90 LMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTG 149
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD T V+ AC L F IH ++++ +D+ + N LV +YAKCG + A
Sbjct: 150 VHPDGFTFPYVLKACTELLDFGLSCIIHGQIIK-YGFGSDVFVQNGLVALYAKCGHIGVA 208
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ VFD + R +VS TS++SGYA QNG+
Sbjct: 209 KVVFDGLYHRTIVSWTSIISGYA-------------------------------QNGKAV 237
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EAL +F ++ V P ++L A ++ DL+ GR H V+K GL +E +
Sbjct: 238 EALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLE----DEPALL 293
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ SL Y KCG V F+ M + + WNAMI G A+NG+ EA+ LF M+
Sbjct: 294 I--SLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN 351
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KPD VT+ + A + G +E + +SK + + + + T ++D+ + G ++ A
Sbjct: 352 IKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVN-TSLIDMYAKCGSVEFA 410
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + D V+W +++ +H
Sbjct: 411 RRVFDRNS-DKDVVMWSAMIMGYGLH 435
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/660 (34%), Positives = 346/660 (52%), Gaps = 72/660 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ PF +L +C ++ D +H+ S++F+ L+D YAKCG L
Sbjct: 111 TYPF--VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV------- 161
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+A RLF+SM RD +WN+M++G + + +A+
Sbjct: 162 ------------------------EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQL 197
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
++M E + + L + G +H + + + V +G+ L+DMY K
Sbjct: 198 IMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAK 257
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLAS 257
C + AR++FD M RN VSW+++I Y + +ALE+F +M + ++P VTL S
Sbjct: 258 CQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGS 317
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA L G ++H +++ + D++LGN L+ MYAKCG
Sbjct: 318 VLRACAKLTDLSRGRKLHCYIIKLGXVL-DILLGNTLLSMYAKCG--------------- 361
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ A F M ++ VS++A+++G QNG AL +FR+++
Sbjct: 362 ----------------VIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQ 405
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P T +L AC++LA LQ G HG + G +D + N+LIDMY
Sbjct: 406 LSGIDPDLTTMLGVLPACSHLAALQHG------FCSHGYLIVRGFATDTLICNALIDMYS 459
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + +F M D VSWNAMI+G +G G EALGLF +L G KPD +T I
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L +CSH+GLV EGR +F +MS++ + P +H CMVD+LGRAG +DEA I MP +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD IW +LL+AC++H+NI LGE V+KK+ + P ++G +VLLSN+Y+ GRW + +R
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ G+ K PGCSWIEI G V+ F+ D+ H +I L+ L EMKR+GY S
Sbjct: 640 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 699
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/589 (28%), Positives = 288/589 (48%), Gaps = 84/589 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL++C++SKS+++ +++H +K+ ++ + ++L +Y C + AR++FD++
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N +V WN ++ +A + F A+ +
Sbjct: 71 NPSVIL-------------------------------WNQIIRAYAWNGPFDGAIDLYHS 99
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++Y++ L AC+G + + G ++H+ SDV++ +AL+D Y KCG
Sbjct: 100 MLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGI 159
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A+R+F M R++V+WN++I G DA+++ ++M GI P+ T+ V+
Sbjct: 160 LVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A G +H +R N +V+G L+DMYAKC L AR +FD M +RN VS
Sbjct: 220 VGEAKALGHGKALHGYCVR-RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS 278
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++M+ GY + +K A +F +M+ ++ +
Sbjct: 279 WSAMIGGYVXSDCMKEALELFDQMILKDAMD----------------------------- 309
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
PT T G++L ACA L DL GR+ H +++K G DI +GN+L+ MY KCG
Sbjct: 310 -PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVL------DILLGNTLLSMYAKCGV 362
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++D R F+ M +D VS++A++ GC QNG AL +F+ M L G PD TM+GVL A
Sbjct: 363 IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLK----DHYTC--MVDLLGRAGCLDEAKTLIEAMP 555
CSH ++ G F S HG ++ D C ++D+ + G + A+ + M
Sbjct: 423 CSHLAALQHG---FCS----HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 475
Query: 556 MQPDAVIWGSLLAACKVHRNIM--LGEYVAKKLLEIEPSNSGPYVLLSN 602
+ D V W +++ +H M LG + L ++P + LLS+
Sbjct: 476 -RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 208/457 (45%), Gaps = 80/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+SS +L + +K++ + +H ++ F + + + L+D+YAKC CL ARK+F
Sbjct: 209 NSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIF 268
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M +N +W+++I G + + +A LF M +D
Sbjct: 269 DVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA--------------------- 307
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + GS L ACA D G ++H + K D+ +G+ L+ MY
Sbjct: 308 ---------MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A R FD M ++ VS++++++ QNG A+ AL +F M SGI+PD T+
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ LAA + G H L+ D ++ NAL+DMY+KCGK++ AR VF+RM
Sbjct: 419 VLPACSHLAALQHGFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH 477
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++V SWNA+I GY +G EALGLF L
Sbjct: 478 DIV-------------------------------SWNAMIIGYGIHGLGMEALGLFHDLL 506
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------ 431
+ P TF LL++C +H+ +V G + D +
Sbjct: 507 ALGLKPDDITFICLLSSC-----------SHSGLVMEGRLWFDAMSRDFSIVPRMEHCIC 555
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ M E D W+A++ C
Sbjct: 556 MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 592
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 356/650 (54%), Gaps = 75/650 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + ++ S S+ + +++HA +IK F S++++ N LI +Y K GC + A KVF
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M +++ +WNS+I+G L G D FS +L
Sbjct: 189 EEMPERDIVSWNSMISGYLALG------------------------------DGFS-SLM 217
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMY 196
F +M F +S SAL AC+ KMG ++H +SR + DV + ++++DMY
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTL 255
K G VS A R+F+GM +RNIV+WN +I CY +NG +DA F +M +G++PD +T
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++ A A L EG IH MR L + +VL AL+DMY +CG+L A +FDRM
Sbjct: 338 INLLPASAIL----EGRTIHGYAMRRGFLPH-MVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+NV+S S+ IA Y QNG+N AL LF+
Sbjct: 393 EKNVISWNSI-------------------------------IAAYVQNGKNYSALELFQE 421
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L S+ P T ++L A A L GR+ H ++VK S S+ + NSL+ M
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK------SRYWSNTIILNSLVHM 475
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y CG +ED + F ++ +D VSWN++I+ A +G+G ++ LF +M+ P+ T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L ACS +G+V+EG +YF SM +E+G+ P +HY CM+DL+GR G AK +E MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
P A IWGSLL A + H++I + E+ A+++ ++E N+G YVLL NMYAE GRW +V R
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
++ LM +G+ + S +E G +VF D+ H +IY VL +++R
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSR 705
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 38/287 (13%)
Query: 307 ARCVF-DRMPIRNVVSE---TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
AR V DR + V++ T + G+A + ++ A +F +M + + WN +I G+T
Sbjct: 48 ARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTS 107
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EA+ + + V +T+ ++ + A ++ L+ G++ H V+K G
Sbjct: 108 CGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF------ 161
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
SD++V NSLI +YMK G D ++FE M ERD VSWN+MI G G G +L LFK+
Sbjct: 162 VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKE 221
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--------TCM 534
ML CG KPD + + L ACSH Y M KE ++ T +
Sbjct: 222 MLKCGFKPDRFSTMSALGACSHV--------YSPKMGKEIHCHAVRSRIETGDVMVMTSI 273
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+D+ + G + A+ + M +Q + V W N+M+G Y
Sbjct: 274 LDMYSKYGEVSYAERIFNGM-IQRNIVAW-----------NVMIGCY 308
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/534 (37%), Positives = 318/534 (59%), Gaps = 39/534 (7%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ S A + + + ++ACA S + ++H L+ SR+ D ++ ++LI +Y KCG
Sbjct: 42 LDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS 101
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A +VFD MR++++VSW SLI Y QN ++A+ + M+ +P+ T AS++ A
Sbjct: 102 VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ A G QIHA ++C+ D+ +G+AL+DMYA+CGK++ A VFD
Sbjct: 162 AGAYADSGIGGQIHALAVKCD-WHEDVYVGSALLDMYARCGKMDMATAVFD--------- 211
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
K+ +N VSWNALI+G+ + G+ E AL +F ++R
Sbjct: 212 ----------------------KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGF 249
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
TH+T+ ++ + A + L+ G+ H H+VK S ++ FVGN+++DMY K GS
Sbjct: 250 EATHFTYSSIFSGLAGIGALEQGKWVHAHMVK------SRQKLTAFVGNTMLDMYAKSGS 303
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D ++FE ++ +D V+WN+M+ AQ G G EA+ F++M G + +T + +L A
Sbjct: 304 MIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTA 363
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+EG+ YF M KE+ L P +HY +VDLLGRAG L+ A I MPM+P A
Sbjct: 364 CSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAA 422
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LLAAC++H+N +G++ A + +++P +SGP VLL N+YA G W RVRK+M+
Sbjct: 423 VWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMK 482
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
GV K+P CSW+EI V++F+ D HP +EIY + ++ ++++ GYVP+
Sbjct: 483 ATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPD 536
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 219/463 (47%), Gaps = 77/463 (16%)
Query: 13 DLAFLDSSPFAK-------LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
DL LDS A + +C +SK++ D R++H + S+F + F+ N LI +Y
Sbjct: 38 DLDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYC 97
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG + A KV F M ++D SW S+++G
Sbjct: 98 KCGSVVEAHKV-------------------------------FDKMRKKDMVSWTSLIAG 126
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+D +EA+G M F + ++F S L A D +G Q+HAL K + D
Sbjct: 127 YAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHED 186
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
VY+GSAL+DMY +CG++ A VFD + +N VSWN+LI+ + + G AL VF M
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G E T +S+ S A + A ++G +HA +++ + V GN ++DMYAK G +
Sbjct: 247 NGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFV-GNTMLDMYAKSGSMI 305
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+AR VF+R+ +++V+ SM++ +A Q G
Sbjct: 306 DARKVFERVLNKDLVTWNSMLTAFA-------------------------------QYGL 334
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+EA+ F +++ + TF +L AC++ ++ G+ + ++ L E +
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNL------EPE 388
Query: 426 IFVGNSLIDMYMKCGSVEDG-CRIFETMVERDWVSWNAMIVGC 467
I +++D+ + G + IF+ +E W A++ C
Sbjct: 389 IEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAAC 431
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/583 (36%), Positives = 340/583 (58%), Gaps = 12/583 (2%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A +LF +PE D WN+M+ G+++ D E + ++ M E ++F L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 159 SAC---AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ G++ G ++H + K S++Y+ +AL+ MY CG + AR VFD +
Sbjct: 142 NGLKRDGGAL--ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++ SWN +I+ Y + +++E+ V M + + P VTL V+SAC+ + ++H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C K L L NALV+ YA CG+++ A +F M R+V+S TS+V GY + ++
Sbjct: 260 EYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K AR F +M R+ +SW +I GY + G E+L +FR ++ + P +T ++L AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+L L++G T++ K+ ++ +D+ VGN+LIDMY KCG E ++F M +R
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIK------NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +W AM+VG A NG G EA+ +F +M +PD +T +GVL AC+H+G+V++ RK+F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ M +H + P HY CMVD+LGRAG + EA ++ MPM P++++WG+LL A ++H +
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E AKK+LE+EP N Y LL N+YA RW ++ VR+ + + K PG S IE
Sbjct: 553 EPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+ G + F+ DK H ++EIY+ L+ L +E Y+P+ S+
Sbjct: 613 VNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSE 655
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 157/292 (53%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + K +RVH + + + + ++N L++ YA CG + A ++F M ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +W SI+ G ++ G + A F MP RD+ SW M+ G+ + F+E+L F +M S
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E++ S L+ACA ++G + + K++ +DV +G+ALIDMY KCG
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A++VF M +R+ +W +++ NG +A++VF +M I+PD++T V+SAC
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + A++ ++ LV +VDM + G + EA + +MP+
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 231/522 (44%), Gaps = 115/522 (22%)
Query: 18 DSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F LL+ R +++ +++H ++K S +++QN L+ +Y+ CG + AR V
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ ++VF+WN M+SG+ + + E++
Sbjct: 193 FDRRCKEDVFSWN-------------------------------LMISGYNRMKEYEESI 221
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
V+M + + + LSAC+ D + +VH +S+ + + + +AL++ Y
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD--------- 235
CG + A R+F M+ R+++SW S++ Y + G P D
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 236 ----------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+LE+F M ++G+ PDE T+ SV++ACA L + + G I + + K++
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIK 400
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
ND+V+GNAL+DMY KCG +A+ VF M R+ + T+MV G A
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA--------------- 445
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
NG+ +EA+ +F ++ S+ P T+ +L+AC
Sbjct: 446 ----------------NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC---------- 479
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWV 458
H+ +V +F + SD + SL +DM + G V++ I M + + +
Sbjct: 480 -NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
W A++ A + E + + +PD+ + +LC
Sbjct: 539 VWGALL--GASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 327/539 (60%), Gaps = 47/539 (8%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ L C K G VH L S++ +D+ + ++++ MY KCG + AR+VFD M
Sbjct: 94 YNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC 153
Query: 214 ERNIVSWNSLITCYEQNGPASDA---LEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+++V+W S+IT Y Q+G AS A L +F+ M+ G+ P+E L+S+V C L + +
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213
Query: 271 GLQIHARLMRCEK--LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G QIH C K + ++ +G++LVDMYA RC
Sbjct: 214 GKQIHGC---CWKYGFQENVFVGSSLVDMYA--------RC------------------- 243
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
++ +RL+F ++ +N VSWNALI+G+ + GE EEALGLF ++RE T +T+
Sbjct: 244 ----GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTY 299
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
LL + + L+ G+ H H++K G + + +VGN+L+ MY K G++ D ++
Sbjct: 300 SALLCSSSTTGSLEQGKWLHAHMMKSGKKLVG------YVGNTLLHMYAKSGNICDAKKV 353
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGL 507
F+ +V+ D VS N+M++G AQ+G G EA+ LF++M+L E +P+ +T + VL ACSHAGL
Sbjct: 354 FDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGL 413
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
++EG YF M K++GL P HYT +VDL GRAG LD+AK+ IE MP++P+A IWG+LL
Sbjct: 414 LDEGLYYFELM-KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALL 472
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
A K+H+N +G Y A+K+LE++P G + LLSN+YA G+W +V +VRK M+ G+ K
Sbjct: 473 GASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKK 532
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQN 686
+P CSW+EI V++F D HP ++Y + + L +++K +GYVP+ S + +Q
Sbjct: 533 EPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQ 591
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 199/377 (52%), Gaps = 36/377 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + + KLL C + + VH ++ S+F +++ I+N ++ +YAKCG L AR+VF
Sbjct: 90 DRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVF 149
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M K+V TW S+ITG + G+ A+ AL
Sbjct: 150 DEMCVKDVVTWTSMITGYSQDGYASSATT----------------------------ALV 181
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + +E++ S + C G Q+H K + +V++GS+L+DMY
Sbjct: 182 LFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYA 241
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + +R VFD + +N VSWN+LI+ + + G +AL +FV+M G E T ++
Sbjct: 242 RCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSA 301
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ + ++ + ++G +HA +M+ K V GN L+ MYAK G + +A+ VFDR+
Sbjct: 302 LLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYV-GNTLLHMYAKSGNICDAKKVFDRLVKV 360
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKML-----ERNVVSWNALIAGYTQNGENEEALGL 372
+VVS SM+ GYA+ K A +F +M+ E N +++ +++ + G +E L
Sbjct: 361 DVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYY 420
Query: 373 FRLLKRESVCP--THYT 387
F L+K+ + P +HYT
Sbjct: 421 FELMKKYGLEPKLSHYT 437
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 154/297 (51%), Gaps = 33/297 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ C S D +++H K F +F+ + L+D+YA+CG L +R VFD++
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+KN + SWN+++SGFA+ EALG FVK
Sbjct: 258 SKN-------------------------------EVSWNALISGFARKGEGEEALGLFVK 286
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E F +E+++ + L + + + + G +HA + KS Y+G+ L+ MY K G
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGN 346
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVS 260
+ A++VFD + + ++VS NS++ Y Q+G +A+E+F MM IEP+++T SV++
Sbjct: 347 ICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLT 406
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
AC+ EGL + LM+ L L +VD++ + G L++A+ + MPI
Sbjct: 407 ACSHAGLLDEGL-YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIE 462
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
N + L + L+ S+ P + LL C L L+ G+ HTH++ R
Sbjct: 69 NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFR----- 123
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY---GTEALGL 479
+D+ + NS++ MY KCGS+E ++F+ M +D V+W +MI G +Q+GY T AL L
Sbjct: 124 -NDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVL 182
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F +M+ G +P+ + ++ C G +G++ K +G + +VD+
Sbjct: 183 FLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWK-YGFQENVFVGSSLVDMYA 241
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R G L E++ + + + + + V W +L++
Sbjct: 242 RCGELRESRLVFDELESK-NEVSWNALISG 270
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/595 (37%), Positives = 337/595 (56%), Gaps = 61/595 (10%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV N +IT L K G I +A RLF M E D +W +++SG+ + EA F ++
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
++ +V +A++ Y + ++S
Sbjct: 126 AK--------------------------------------KNVVTWTAMVGGYIRSNKIS 147
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++F+ M +N+VSWN++I Y QNG A+ +F +M E + V+ +V+S A
Sbjct: 148 DAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP----ERNVVSWNTVMSMLA 203
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+E ++ R+ D++ A++ G L+EA +F+RMP R++ S
Sbjct: 204 QCGRIEEARRLFDRMPE-----RDVISWTAMI-----AGLLDEALDLFERMPERDLPSWN 253
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
+M++G + ++ AR +F +M ++NV+SW +I G Q GE+EEAL +F R+L
Sbjct: 254 TMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAK 313
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P TF ++L AC+NLA L G+Q H + K + + FV ++LI+MY KCG +
Sbjct: 314 PNQGTFVSVLGACSNLAGLGEGQQVHQIISK------TVYQDSTFVVSALINMYSKCGEL 367
Query: 443 EDGCRIFETMV--ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++F+ + +RD VSWN +I A +GYG EA+ FK+M G KPD VT +G+L
Sbjct: 368 GTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLS 427
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSHAGLVEEG KYF + K+ + +DHY C+VDL GRAG L EA IE + +P A
Sbjct: 428 ACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSA 487
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+WG+LLA C VH N+ +G+ AKKLLE+EP N+G Y+LLSN+YA G+W E RVR M
Sbjct: 488 RVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKM 547
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ +G+ KQPGCSWIE+ V+VF+V DK H +K IY +L+ L +MK+ GY PN
Sbjct: 548 KDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 602
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 222/458 (48%), Gaps = 65/458 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ ++ + + RR+ R+ + + ++ Y + + A K+F
Sbjct: 97 DVITWTTVISGYIKCGMIEEARRLFDRVDAKK---NVVTWTAMVGGYIRSNKISDAEKLF 153
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M NKNV +WN++I G + G ID A LF MPER+ SWN+++S AQ R EA
Sbjct: 154 NEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARR 213
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E S + AG +D + L + D+ + +I
Sbjct: 214 LFDRM-------PERDVISWTAMIAGLLDEALD------LFERMPERDLPSWNTMITGLI 260
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLA 256
+ G + AR++F+ M ++N++SW ++IT Q G + +AL++F RM+++ G +P++ T
Sbjct: 261 QNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFV 320
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC++LA EG Q+H + + + V+ +AL++MY+KCG+L AR +FD
Sbjct: 321 SVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVV-SALINMYSKCGELGTARKMFD---- 375
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
M S +R++VSWN +IA Y +G +EA+ F+ +
Sbjct: 376 ------DGMTS-------------------QRDLVSWNGIIAAYAHHGYGKEAINFFKEM 410
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG--EESDIFVGNS--- 431
++ P T+ LL+AC +H +V+ GL++ ++ I V
Sbjct: 411 RKSGFKPDDVTYVGLLSAC-----------SHAGLVEEGLKYFDELVKDRSILVREDHYA 459
Query: 432 -LIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGC 467
L+D+ + G +++ E + + W A++ GC
Sbjct: 460 CLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGC 497
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/673 (34%), Positives = 369/673 (54%), Gaps = 51/673 (7%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L SC KS++ +++HA+I + +I N+L+ A C +
Sbjct: 44 LKSC---KSMTHLKQIHAQIFRVGLHQDIVSLNKLM---AFCTDPFN------------- 84
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
G ++ A ++F + +N ++ FA+ + L F K+ +
Sbjct: 85 -------------GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLRED 131
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+++ A + ++ L++K+ D Y+ ++LIDMY +
Sbjct: 132 GLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVM 191
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACAS 264
+ +FD M +R+++SWN +I+ Y + DA+ VF RM SG+ PDE T+ S +SAC +
Sbjct: 192 KMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTA 251
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + G +IH + + ++ ++GNAL+DMY KCG L+ AR VF+ MP +NV+ T+
Sbjct: 252 LKRLELGKKIHHYVR--DNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTT 309
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
MVSGYA ++ AR +F R+VV W A+I GY Q +EA+ LFR ++ V P
Sbjct: 310 MVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPD 369
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ +LL CA ++ G+ H + ++ + D VG +LI+MY KCG +E
Sbjct: 370 KFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPI------DAVVGTALIEMYAKCGFIEK 423
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
IF + +D SW ++I G A NG ++AL LF KM G +PD +T IGVL ACSH
Sbjct: 424 ALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSH 483
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV--- 561
GLVEEGRK+F+SM E+ + P +HY C+VDLLGRAG L+EA+ LI+ +P + A+
Sbjct: 484 GGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVP 543
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
++GSLL+AC+++ N+ +GE VAK+L++ E S+S + LL+N+YA RW +V +VR+ M+
Sbjct: 544 LYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMK 603
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE- 680
GV K PGCS IE+ ++ F HP +EIY +L ++ + + +G N + E
Sbjct: 604 DLGVKKTPGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPL--LGSAKNEMEGED 661
Query: 681 ----AYEEQNGSN 689
++EQ S+
Sbjct: 662 LVGMTFDEQGCSS 674
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 160/301 (53%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L +C K + +++H ++ I N L+D+Y KCGCL AR VF
Sbjct: 238 DEATVVSTLSACTALKRLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVF 296
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M +KNV W ++++G G +++A LF P RD W +M++G+ Q +RF EA+
Sbjct: 297 EEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVA 356
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M ++ S L+ CA + + G +H + ++R D +G+ALI+MY
Sbjct: 357 LFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYA 416
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F G+R ++ SW S+I NG S ALE+F +M +G+ PD++T
Sbjct: 417 KCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIG 476
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ +EG + + +++ + LVD+ + G LNEA + ++P
Sbjct: 477 VLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDE 536
Query: 318 N 318
N
Sbjct: 537 N 537
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 346/660 (52%), Gaps = 70/660 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D F ++ +C + + ++H +IKS + + QN LI +Y K
Sbjct: 178 FPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTK--------- 228
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+G I AS +F + +D SW SM++GF Q EA
Sbjct: 229 ----------------------FGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEA 266
Query: 136 LGYFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L F M + + +E+ FGS SAC + + G Q+ + +K +V+ G +L D
Sbjct: 267 LYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCD 326
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY K G + A+R F + ++VSWN++I N ++A+ F +M+ G+ PD++T
Sbjct: 327 MYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDIT 385
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+++ AC S +G+QIH+ +++ L + N+L+ MY KC L++A VF
Sbjct: 386 FLNLLCACGSPMTLNQGMQIHSYIIKM-GLDKVAAVCNSLLTMYTKCSNLHDAFNVFKD- 443
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+SE N+VSWNA+++ +Q+ + EA LF+
Sbjct: 444 -----ISENG------------------------NLVSWNAILSACSQHKQPGEAFRLFK 474
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
L+ P + T +L CA L L++G Q H VK GL D+ V N LID
Sbjct: 475 LMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVV------DVSVSNRLID 528
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG ++ +F++ D VSW+++IVG AQ G G EAL LF+ M G +P+ VT
Sbjct: 529 MYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVT 588
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+GVL ACSH GLVEEG +++M E G+ P ++H +CMVDLL RAGCL EA+ I+
Sbjct: 589 YLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKT 648
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PD +W +LLA+CK H N+ + E A+ +L+++PSNS VLLSN++A G W EV
Sbjct: 649 GFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVA 708
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R+R LM++ GV K PG SWIE+ ++VF +D HP IY +L+ L +M GY P
Sbjct: 709 RLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDP 768
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 226/461 (49%), Gaps = 42/461 (9%)
Query: 116 QCSWNSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
+ S NS ++ + + EAL F + + + L ++ + + AC K G ++H
Sbjct: 44 ELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIH 103
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ KS D+ + + +++MYGKCG + AR+ FD M+ R++VSW +I+ Y QNG +
Sbjct: 104 DHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEN 163
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
DA+ ++++M+ SG PD++T S++ AC G Q+H +++ + L+ NAL
Sbjct: 164 DAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIK-SGYDHHLIAQNAL 222
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ MY K G++ A VF + ++++S SM++G
Sbjct: 223 ISMYTKFGQIAHASDVFTMISTKDLISWASMITG-------------------------- 256
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVC-PTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+TQ G EAL LFR + R+ V P + FG++ +AC +L + GRQ K
Sbjct: 257 -----FTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAK 311
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
GL ++F G SL DMY K G + R F + D VSWNA+I A N
Sbjct: 312 FGL------GRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDV 364
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EA+ F +M+ G PD +T + +LCAC + +G + S + K GL +
Sbjct: 365 NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKM-GLDKVAAVCNS 423
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
++ + + L +A + + + + V W ++L+AC H+
Sbjct: 424 LLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK 464
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/533 (40%), Positives = 319/533 (59%), Gaps = 8/533 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A+ LF +P WN M+ G++Q ++ EA+ + M+S+ + ++ L ACA
Sbjct: 749 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACAR 808
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+ T VHA + K + SD+++ +ALI Y + AR+VFD M ER++VSWNSL
Sbjct: 809 ISNVSC-TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL 867
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y + S+ L VF M + ++ D VT+ VV AC L + + + K
Sbjct: 868 ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGV-VDAMIEYIEENK 926
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ D+ LGN L+DMY + ++ AR VFDRM RN+VS +M+ GY KA ++ +AR +F
Sbjct: 927 VEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFD 986
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
M R+V+SW ++I+ Y+Q G+ +A+ LF+ + V P T ++L+ACA++ L +
Sbjct: 987 DMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDV 1046
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G H ++ K+ + +DI+VGN+LIDMY KCG+VE G +FE M +RD VSW ++
Sbjct: 1047 GEAVHEYIRKYDV------NADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSV 1100
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G A NG AL LF ML G +P H T +GVL AC+HAG+V++G +YF SM + +G
Sbjct: 1101 IAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYG 1160
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
L P HY C+VDLL R+G L A I+ MPM PD V+W LL+A +VH N+ L E
Sbjct: 1161 LTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIAT 1220
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
KKLLE +PSNSG Y+L SN YA RW +V+++R+LM + V K S +EI
Sbjct: 1221 KKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEI 1273
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 199/434 (45%), Gaps = 108/434 (24%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF LL +C R +VS T VHAR++K F S++F+ N LI YA L ARKVFD+
Sbjct: 800 PF--LLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDE- 855
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
M ERD SWNS++ G+ + R+SE L F
Sbjct: 856 ------------------------------MSERDLVSWNSLICGYGRCRRYSEVLVVFE 885
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + + + AC ++ + + + +++ DVY+G+ LIDMYG+
Sbjct: 886 EMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRS 945
Query: 201 RVSCARRVFDGMRERNIVSWN-------------------------------SLITCYEQ 229
V ARRVFD MR+RN+VSWN S+I+ Y Q
Sbjct: 946 MVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQ 1005
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G A+ +F MM + ++PDE+T+ASV+SACA + A G +H +R + D+
Sbjct: 1006 AGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVH-EYIRKYDVNADIY 1064
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+GNAL+DMY KCG + + VF+ M R+ VS TS+++G A
Sbjct: 1065 VGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLA------------------- 1105
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
NG + AL LF L+ RE V PTH TF +L AC AH
Sbjct: 1106 ------------VNGSADSALNLFSLMLREGVRPTHGTFVGVLLAC-----------AHA 1142
Query: 410 HVVKHGLRFLSGEE 423
VV GL + E
Sbjct: 1143 GVVDKGLEYFESME 1156
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 181/341 (53%), Gaps = 4/341 (1%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
I +++ ++++ N LID+Y + + AR+VFD+M ++N+ +WN++I G K G + A
Sbjct: 922 IEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAA 981
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
+LF MP RD SW SM+S ++Q +F +A+ F +M E + S LSACA
Sbjct: 982 RKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHI 1041
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
+G VH + K ++D+Y+G+ALIDMY KCG V VF+ M +R+ VSW S+I
Sbjct: 1042 GALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVI 1101
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
NG A AL +F M+ G+ P T V+ ACA +GL+ + R L
Sbjct: 1102 AGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGL 1161
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFT 343
++ +VD+ ++ G L A RMP+ +VV ++S ++ A +
Sbjct: 1162 TPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATK 1221
Query: 344 KMLERNVV-SWNALIAGYTQNGEN--EEALGLFRLLKRESV 381
K+LE + S N +++ T G N E+ + + RL++ +V
Sbjct: 1222 KLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNV 1262
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 153/308 (49%), Gaps = 25/308 (8%)
Query: 320 VSETSMVSGYA-KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+S +++ YA +++ A +F ++ + WN +I G++Q + EA+ + L+
Sbjct: 730 ISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYS 789
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+++ + T+ LL ACA ++++ H V+K G +SD+FV N+LI Y
Sbjct: 790 QALFGNNLTYPFLLKACARISNVSCT-TVHARVLKLGF------DSDLFVSNALIHGYAG 842
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ ++F+ M ERD VSWN++I G + +E L +F++M + K D VTM+ V
Sbjct: 843 FCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKV 902
Query: 499 LCACS---HAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEA 553
+ AC+ G+V+ +Y E D Y ++D+ GR +D A+ + +
Sbjct: 903 VLACTVLGEWGVVDAMIEYIEENKVE------VDVYLGNTLIDMYGRRSMVDLARRVFDR 956
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG-PYVLLSNMYAELGRWGE 612
M + V W +++ N++ A+KL + P + + + Y++ G++G+
Sbjct: 957 M-RDRNMVSWNAMIMGYGKAGNLV----AARKLFDDMPHRDVISWTSMISSYSQAGQFGK 1011
Query: 613 VVRVRKLM 620
VR+ + M
Sbjct: 1012 AVRLFQEM 1019
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C ++ VH I K ++I++ N LID+Y KCG + VF
Sbjct: 1027 DEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVF 1086
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
++M ++ +W S+I GL G D A LF+ M
Sbjct: 1087 EEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLM 1120
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/598 (35%), Positives = 340/598 (56%), Gaps = 43/598 (7%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N ++ L + A+ +FA P + +N+++ G +D F +A+ +
Sbjct: 32 HQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYAS 91
Query: 142 MHSENFALSEYSFGSALSACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M FA ++F L AC F +G +H+L+ K+ + DV++ + L+ +Y K G
Sbjct: 92 MRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNG 151
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR+VFD + E+N+VSW ++I Y ++G +AL +F ++ G+ PD TL ++
Sbjct: 152 FLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILY 211
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ + G I D Y + + + NV
Sbjct: 212 ACSRVGDLASGRWI---------------------DGYMR-----------ESGSVGNVF 239
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
TS+V YAK S++ AR +F M+E++VV W+ALI GY NG +EAL +F ++RE+
Sbjct: 240 VATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQREN 299
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE--SDIFVGNSLIDMYMK 438
V P Y + +AC+ L L+LG A + G+E S+ +G +LID Y K
Sbjct: 300 VRPDCYAMVGVFSACSRLGALELGNWARG--------LMDGDEFLSNPVLGTALIDFYAK 351
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CGSV +F+ M +D V +NA+I G A G+ A G+F +M+ G +PD T +G+
Sbjct: 352 CGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGL 411
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
LC C+HAGLV++G +YFS MS + P +HY CMVDL RAG L EA+ LI +MPM+
Sbjct: 412 LCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEA 471
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
++++WG+LL C++H++ L E+V K+L+E+EP NSG YVLLSN+Y+ RW E ++R
Sbjct: 472 NSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRS 531
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
+ ++G+ K PGCSW+E+ G V+ F+V D HPL+ +IY L+ L ++++ GY P
Sbjct: 532 SLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTT 589
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 196/419 (46%), Gaps = 45/419 (10%)
Query: 155 GSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
GS L C G Q H LL + D Y+ + L+ A VF
Sbjct: 2 GSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQT 61
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA-FKEG 271
NI +N+LI N DA+ V+ M G PD T V+ AC L F G
Sbjct: 62 PHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVG 121
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
L +H+ +++ FD +V +T +V Y+K
Sbjct: 122 LSLHSLVIKTG----------------------------FDW----DVFVKTGLVCLYSK 149
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ AR +F ++ E+NVVSW A+I GY ++G EALGLFR L + P +T +
Sbjct: 150 NGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRI 209
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L AC+ + DL GR ++ + SG ++FV SL+DMY KCGS+E+ R+F+
Sbjct: 210 LYACSRVGDLASGRWIDGYMRE------SGSVGNVFVATSLVDMYAKCGSMEEARRVFDG 263
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
MVE+D V W+A+I G A NG EAL +F +M +PD M+GV ACS G +E G
Sbjct: 264 MVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELG 323
Query: 512 RKYFSSMSKEHGLA-PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
M + L+ P+ T ++D + G + +AK + + M + D V++ ++++
Sbjct: 324 NWARGLMDGDEFLSNPVLG--TALIDFYAKCGSVAQAKEVFKGM-RRKDCVVFNAVISG 379
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 206/458 (44%), Gaps = 82/458 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDT-RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D+ F +L +C R +H+ +IK+ F ++F++ L+ +Y+K G L ARKV
Sbjct: 100 DNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKV 159
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++ KNV +W +II G ++ G C F EAL
Sbjct: 160 FDEIPEKNVVSWTAIICGYIESG-----------------C--------------FGEAL 188
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
G F + ++ L AC+ D G + + +S +V++ ++L+DMY
Sbjct: 189 GLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMY 248
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + ARRVFDGM E+++V W++LI Y NG +AL+VF M + PD +
Sbjct: 249 AKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMV 308
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V SAC+ L A + G LM ++ ++ VLG AL+D YAKCG + +A+ VF M
Sbjct: 309 GVFSACSRLGALELGNWARG-LMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRR 367
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ V +++SG A V + A G+F +
Sbjct: 368 KDCVVFNAVISGLAMCGHVGA-------------------------------AFGVFGQM 396
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS----- 431
+ + P TF LL C H +V G R+ SG S V +
Sbjct: 397 VKVGMQPDGNTFVGLLCGC-----------THAGLVDDGHRYFSGMSSVFSVTPTIEHYG 445
Query: 432 -LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G + + + +M +E + + W A++ GC
Sbjct: 446 CMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGC 483
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 154/339 (45%), Gaps = 34/339 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++L +C R ++ R + + +S +F+ L+D+YAKCG + AR+VF
Sbjct: 202 DSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVF 261
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M K+V W+++I G G MP+ EAL
Sbjct: 262 DGMVEKDVVCWSALIQGYASNG-----------MPK--------------------EALD 290
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M EN Y+ SAC+ ++G L+ + S+ +G+ALID Y
Sbjct: 291 VFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYA 350
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V+ A+ VF GMR ++ V +N++I+ G A VF +M+ G++PD T
Sbjct: 351 KCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVG 410
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C +G + + + + + +VD+ A+ G L EA+ + MP+
Sbjct: 411 LLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPME 470
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
N + +++ G + A + +++E + WN+
Sbjct: 471 ANSIVWGALLGGCRLHKDTQLAEHVLKQLIE--LEPWNS 507
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/606 (36%), Positives = 336/606 (55%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M G A + AL +V M S + YSF L +CA
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR---------------------- 201
S G Q+H + K Y D+Y+ ++LI MY + GR
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 202 ---------VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
++ AR++FD + +++VSWN++I+ Y + +ALE++ MM + ++PDE
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ +VVSACA + + G Q+H+ + +++ + N L+D+Y+KCG+
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHS-WIEDHGFGSNIKIVNVLIDLYSKCGE--------- 247
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V++A +F + +++V+SWN LI G+T +EAL L
Sbjct: 248 ----------------------VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLL 285
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K L G + + SL
Sbjct: 286 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKR----LKGVTNASSLLTSL 341
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F++M+ R SWNAMI G A +G A LF KM G PD
Sbjct: 342 IDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDD 401
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSH+G+++ GR F SMS+++ + P +HY CM+DLLG G EAK +I
Sbjct: 402 ITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIR 461
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM+PD VIW SLL ACK+H N+ LGE A+ L++IEP N G YVLLSN+YA GRW +
Sbjct: 462 TMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQ 521
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V ++R L+ +G+ K PGCS IEI V+ F++ DK HP N+EIY +L+ + M+ G+
Sbjct: 522 VAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGF 581
Query: 673 VPNASD 678
VP+ S+
Sbjct: 582 VPDTSE 587
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 238/455 (52%), Gaps = 44/455 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +SK++ + +++H ++K + ++++ LI +YA+ G L A KVF
Sbjct: 64 NSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVF 123
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ S+++V ++ ++ITG G+I++A +LF + +D SWN+M+SG+ + F EAL
Sbjct: 124 DRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALE 183
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ M N E + + +SACA S ++G Q+H+ + + S++ + + LID+Y
Sbjct: 184 LYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYS 243
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A +F G+ +++++SWN+LI + +AL +F M+ SG P++VT+ S
Sbjct: 244 KCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLS 303
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ ACA L A G IH + R + + N L +L+DMYAKCG + A+ VFD M
Sbjct: 304 VLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLT 363
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++ S +M+ G+A +G+ A LF +
Sbjct: 364 RSLSSWNAMIFGFA-------------------------------MHGKANAAFDLFSKM 392
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLI 433
++ + P TF LL+AC++ L LGR H R +S + + +I
Sbjct: 393 RKNGIDPDDITFVGLLSACSHSGMLDLGR--------HIFRSMSQDYKITPKLEHYGCMI 444
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
D+ CG ++ + TM +E D V W +++ C
Sbjct: 445 DLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 209/354 (59%), Gaps = 8/354 (2%)
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+S A +F+ ++E N++ WN++ + N + AL+++V M++ G+ P+ + ++ +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA A EG QIH +++ D+ + +L+ MYA+ G+L +A VFDR R+VVS
Sbjct: 75 CAKSKALIEGQQIHGHVLKL-GYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T++++GYA + +AR +F ++ ++VVSWNA+I+GY + +EAL L++ + + +V
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +++ACA ++LGRQ H+ + HG S+I + N LID+Y KCG
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFG------SNIKIVNVLIDLYSKCGE 247
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE C +F+ + ++D +SWN +I G EAL LF++ML GE P+ VTM+ VL A
Sbjct: 248 VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307
Query: 502 CSHAGLVEEGRKYFSSMSKE-HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
C+H G ++ GR ++K G+ T ++D+ + G ++ AK + ++M
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM 361
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/644 (35%), Positives = 349/644 (54%), Gaps = 80/644 (12%)
Query: 36 SDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDKMSNKNVFTWNSIIT 93
+ ++HA +K+ + F+ +RL+ +Y+ K L AR +FD++ +++ WN+II
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
++ F D LF H+ E L +NF L
Sbjct: 87 CYVENQFSHDGIVLF--------------------HELVHEYL-------PDNFTLP--- 116
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ CA + G Q+H L K + SDV++ +L++MY KCG + CAR+VFDGM
Sbjct: 117 --CVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 174
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
++++V WNSLI Y + G AL++F M P+ + V
Sbjct: 175 DKDVVLWNSLIDGYARCGEIDIALQLFEEM------PERDAFSWTV-------------- 214
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
LVD +KCGK+ AR +FD+MP RN+VS +M++GY K+
Sbjct: 215 --------------------LVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSG 254
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
SA +F +M ++V+WN +IAGY NG+ +A+ +F ++ + P+H T ++L+
Sbjct: 255 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + LA L GR H+++ K+G E D +G SLI+MY KCG +E +F +
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGF------ELDGILGTSLIEMYAKCGCIESALTVFRAIQ 368
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++ W A+IVG +G AL LF +M G KP+ + IGVL AC+HAGLV++GR+
Sbjct: 369 KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ 428
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M E+ + P +HY C+VD+L RAG L+EAK IE MP+ P+ VIW SLL + H
Sbjct: 429 YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNH 488
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
I +GEY A++++E+ P G Y+LLSNMYA G W +V VR++M KRG K PGCS
Sbjct: 489 GKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSS 548
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+E G ++ F+V D HP KEIY + + ++K VG+VP+ +
Sbjct: 549 VEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTT 592
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 172/374 (45%), Gaps = 63/374 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ C R V + +++H +K F S++F+Q L+++Y+KCG + ARKVF
Sbjct: 111 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVF 170
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE------------------------ 113
D M +K+V WNS+I G + G ID A +LF MPE
Sbjct: 171 DGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARK 230
Query: 114 -------RDQCSWNSMVSGFAQHDRFSEALGYFVKMH-----SENFALSEYSFG------ 155
R+ SWN+M++G+ + F AL F +M + N ++ Y
Sbjct: 231 LFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDA 290
Query: 156 --------------------SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
S LSA +G G +H+ + K+ + D +G++LI+M
Sbjct: 291 VKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEM 350
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + A VF ++++ + W ++I +G A+ AL +F+ M +G++P+ +
Sbjct: 351 YAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIF 410
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V++AC +G Q +M K+ L LVD+ + G L EA+ + MP
Sbjct: 411 IGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 470
Query: 316 IR-NVVSETSMVSG 328
I N V S++ G
Sbjct: 471 ISPNKVIWMSLLGG 484
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 359/659 (54%), Gaps = 74/659 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIK--SQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
F + + R + ++ ++K S + + F+ + I +YA+ GC+ AR++FD
Sbjct: 221 FVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFD- 279
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
ER+ WN+M+ G+ Q++ EA+ F
Sbjct: 280 ------------------------------CCLERNTEVWNTMIGGYVQNNCPIEAIDLF 309
Query: 140 VK-MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
V+ M SE F L + +F SAL+A + +G Q+HA + KS V + +A+I MY +
Sbjct: 310 VQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSR 369
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + + +VF M ER++V+WN++++ + QNG + L + M G D VTL ++
Sbjct: 370 CGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTAL 429
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S ++L + + G Q HA L+R ++ + + G L+DMYAK G + A+ +F++
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIR-HGIQFEGMDG-YLIDMYAKSGLITTAQQLFEK----- 482
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+R+ +WNA+IAGYTQNG +EE +FR +
Sbjct: 483 ------------------------NSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
++V P T ++L AC + + LG+Q H ++ L ++FVG +L+DMY K
Sbjct: 519 QNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFL------NQNVFVGTALLDMYSK 572
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G++ +F +E++ V++ MI+ Q+G G AL LF ML G KPD VT + +
Sbjct: 573 SGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAI 632
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS+AGLV+EG + F SM +E+ + P +HY C+ D+LGR G + EA ++ + +
Sbjct: 633 LSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEG 692
Query: 559 DAV-IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN--SGPYVLLSNMYAELGRWGEVVR 615
+ IWGSLL AC++H LG+ VA KLLE+E + +G +VLLSN+YA G W V R
Sbjct: 693 NTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDR 752
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VRK MR++G++K+ GCSW+E+ GHVN FM +D +HP EIY +L+ L EMK GY P
Sbjct: 753 VRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 176/663 (26%), Positives = 311/663 (46%), Gaps = 102/663 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F+ L +C +++S+ + +H +++S F S + N L+++Y+ C
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC--------- 152
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
T + + D R+F +M +R+ +WN+M+S + + +R EA
Sbjct: 153 ---------LTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAF 203
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALID 194
F M + SF + A D+ ++ L+ K S Y D ++ S+ I
Sbjct: 204 KMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIF 263
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEV 253
MY + G V AR +FD ERN WN++I Y QN +A+++FV++M S D+V
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDV 323
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S ++A + L G Q+HA +++ + ++L NA++ MY++CG
Sbjct: 324 TFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVIL-NAIIVMYSRCG----------- 371
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
S+ ++ +F+ MLER+VV+WN +++ + QNG ++E L L
Sbjct: 372 --------------------SIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLV 411
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++++ T LL+ +NL ++G+QAH ++++HG++F E D + LI
Sbjct: 412 FEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQF---EGMDGY----LI 464
Query: 434 DMYMKCGSVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
DMY K G + ++FE + +RD +WNAMI G QNG E +F+KM+ +P+
Sbjct: 465 DMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPN 524
Query: 492 HVTMIGVLCACSHAGLVEEGRKY-------FSSMSKEHGLAPLKDH-------------- 530
VT+ +L AC+ G + G++ F + + G A L +
Sbjct: 525 AVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFA 584
Query: 531 ---------YTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIML 578
YT M+ G+ G + A +L AM ++PD+V + ++L+AC +
Sbjct: 585 ETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDE 644
Query: 579 GEYVAKKL---LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
G + + + +I+PS S Y +++M LGR G V + ++ G W
Sbjct: 645 GLRIFQSMEREYKIQPS-SEHYCCVADM---LGRVGRVXEAYEFVKGLGEEGNTFRIWGS 700
Query: 636 ILG 638
+LG
Sbjct: 701 LLG 703
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 241/517 (46%), Gaps = 58/517 (11%)
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFA 148
S ++ L + G A LF S+P WN+++ GF ++ +AL ++ +M S +
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC--------- 199
Y+F S L ACA + K+G +H + +S + S + ++L++MY C
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 200 ----GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
RRVFD MR+RN+V+WN++I+ Y + +A ++F MM GI P V+
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 256 ASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+V A + + ++ +++ +D + ++ + MYA+ G ++ AR +FD
Sbjct: 222 VNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFD-- 279
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF- 373
LERN WN +I GY QN EA+ LF
Sbjct: 280 -----------------------------CCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++++ E TF + L A + L L LGRQ H +++K S + + N++I
Sbjct: 311 QVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILK------SSTILQVVILNAII 364
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY +CGS+ ++F M+ERD V+WN M+ QNG E L L +M G D V
Sbjct: 365 VMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSV 424
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA-PLKDHYTCMVDLLGRAGCLDEAKTLIE 552
T+ +L S+ E G++ + + + HG+ D Y ++D+ ++G + A+ L E
Sbjct: 425 TLTALLSLASNLRSQEIGKQAHAYLIR-HGIQFEGMDGY--LIDMYAKSGLITTAQQLFE 481
Query: 553 AMPM-QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
D W +++A + G V +K++E
Sbjct: 482 KNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 355/654 (54%), Gaps = 65/654 (9%)
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
++ F ++ N + G ++ G + +A +F M D WN ++ G+ + F
Sbjct: 46 SKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLF 105
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA+ ++ +M E ++F + AC + +G +VH L K + DVY+ + L
Sbjct: 106 QEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFL 165
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
IDMY K G + A +VFD M R++VSWNS+++ Y+ +G +L F M+ G + D
Sbjct: 166 IDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADR 225
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC----------- 301
+ S + AC+ + G++IH +++R E L D+++ +L+DMY KC
Sbjct: 226 FGMISALGACSIEHCLRSGMEIHCQVIRSE-LELDIMVQTSLIDMYGKCGKVDYAERVFN 284
Query: 302 ----------------------------------------GKLNEARCV----FDRMPIR 317
G L E + + +M +
Sbjct: 285 RIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLP 344
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V ET++V Y K +K A +F +M E+N+VSWN ++A Y QN + +EAL +F+ +
Sbjct: 345 YLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHIL 404
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E + P T ++L A A LA G+Q H++++K GL S+ F+ N+++ MY
Sbjct: 405 NEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGL------GSNTFISNAIVYMYA 458
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ F+ MV +D VSWN MI+ A +G+G ++ F +M G KP+ T +
Sbjct: 459 KCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVS 518
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACS +GL++EG +F+SM E+G+ P +HY CM+DLLGR G LDEAK IE MP+
Sbjct: 519 LLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLV 578
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P A IWGSLLAA + H +++L E A+ +L ++ N+G YVLLSNMYAE GRW +V R++
Sbjct: 579 PTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIK 638
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
LM+++G+VK GCS ++I G F+ +D+ H IY VL +L +K++G
Sbjct: 639 YLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDIL---LKKIG 689
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 222/480 (46%), Gaps = 100/480 (20%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
++ CLRS +H ++I+S+ +I +Q LID+Y KCG + A +VF+++ +KN+
Sbjct: 237 IEHCLRS-----GMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNI 291
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
WN++I G M E D+ + +
Sbjct: 292 VAWNAMIGG----------------MQEDDKVIPDVI----------------------- 312
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ + L +C+ S G +H + + + + +AL+DMYGKCG + A
Sbjct: 313 -------TMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLA 365
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
VF+ M E+N+VSWN+++ Y QN +AL++F ++ ++PD +T+ASV+ A A L
Sbjct: 366 EHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAEL 425
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A+ EG QIH+ +M+ L ++ + NA+V MYAKCG L AR FD M ++VVS +M
Sbjct: 426 ASRSEGKQIHSYIMKL-GLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTM 484
Query: 326 VSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-- 379
+ YA +++ F++M + N ++ +L+ + +G +E G F +K E
Sbjct: 485 IMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYG 544
Query: 380 -------------------------------SVCPTHYTFGNLLNACANLADLQLGRQAH 408
+ PT +G+LL A N D+ L A
Sbjct: 545 IDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAA 604
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
H++ L + + +V L +MY + G ED RI M E+ V VGC+
Sbjct: 605 RHILS-----LKHDNTGCYV--LLSNMYAEAGRWEDVDRIKYLMKEQGLVK----TVGCS 653
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 171/380 (45%), Gaps = 43/380 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D D LL SC +S ++ + + +H I+ F + ++ L+D+Y KCG L
Sbjct: 305 DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKL 364
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A VF++M+ E++ SWN+MV+ + Q++++
Sbjct: 365 AEHVFNQMN-------------------------------EKNMVSWNTMVAAYVQNEQY 393
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL F + +E + S L A A G Q+H+ + K S+ ++ +A+
Sbjct: 394 KEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAI 453
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MY KCG + AR FDGM +++VSWN++I Y +G +++ F M G +P+
Sbjct: 454 VYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNG 513
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T S+++AC+ EG + + + ++D+ + G L+EA+C +
Sbjct: 514 STFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIE 573
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG--------YTQNG 364
MP+ T+ + G A+S ++ ++ R+++S G Y + G
Sbjct: 574 EMPL----VPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAG 629
Query: 365 ENEEALGLFRLLKRESVCPT 384
E+ + L+K + + T
Sbjct: 630 RWEDVDRIKYLMKEQGLVKT 649
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 8/267 (2%)
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
K +++ F + N ++ T + G+ ++ + +A MF KM + WN +I GYT
Sbjct: 42 KRAQSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTN 101
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NG +EA+ + ++ E + ++TF ++ AC L L +G++ H ++K G
Sbjct: 102 NGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGF------ 155
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ D++V N LIDMY+K G +E ++F+ M RD VSWN+M+ G +G G +L FK+
Sbjct: 156 DLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKE 215
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML G K D MI L ACS + G + + + + T ++D+ G+ G
Sbjct: 216 MLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ-TSLIDMYGKCG 274
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D A+ + + + V W +++
Sbjct: 275 KVDYAERVFNRI-YSKNIVAWNAMIGG 300
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/647 (36%), Positives = 368/647 (56%), Gaps = 45/647 (6%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKV 76
S+P +L SC S+ +++ A I + ++IF +RL+ A G ++ A +
Sbjct: 52 SNPTLLILQSC---SSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLI 108
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ N F WN+ M+ G+ + + S
Sbjct: 109 FDQTELPNCFFWNT-------------------------------MIKGYCKANHPSMGF 137
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F +M SF AL AC + +G VH+++ K + SD+++ + LI Y
Sbjct: 138 SFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNY 197
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ G + AR++FD +++V+W ++I Y +N +A+ +F M++S ++P+EVT+
Sbjct: 198 VETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMI 257
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++SAC+ + G +H + R + + L L NA++DMY KCG L AR +F+ M
Sbjct: 258 ALLSACSQKGDSEMGKTLHEHIRR-KDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMER 316
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-L 375
R+V S TS+++GYAK + SAR +F +M ERN+VSWNA+IAGY+QN + EAL LF +
Sbjct: 317 RDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNM 376
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAH-THVVKHGLRFLSGEESDIFVGNSLID 434
+ + PT T +L+A L L++G++ H HV K G++ + + N+++D
Sbjct: 377 VDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQV------SLILKNAVMD 430
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCGS++ ++F +M E++ VSWN+MI A G+ +AL LF +M+ G KPDH+T
Sbjct: 431 MYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHIT 490
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
IGVL ACS+ G V EG+ +F SM G+ P ++HY CMVDLL R G L EA LI M
Sbjct: 491 FIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRM 550
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PM+ WG+LL AC+ H N+ + + +KLLE++P +SG Y LL+N+ A+ +W +V
Sbjct: 551 PMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVR 610
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
VR++MR+RGV K PG S IEI G + F+V D H + EIY V+
Sbjct: 611 MVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVVN 657
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 223/497 (44%), Gaps = 100/497 (20%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+Q++ + A DS F L +C + VH+ I K F S++F+QN LI Y +
Sbjct: 141 RQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVET 200
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
GCL AR++FD+ S K+V TW ++I G + ++D+A LF SM D
Sbjct: 201 GCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSD------------ 248
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
VK +E + + LSAC+ D +MG +H + + + +
Sbjct: 249 ------------VKP-------NEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLN 289
Query: 188 MGSALIDMYGKC-------------------------------GRVSCARRVFDGMRERN 216
+ +A++DMY KC G + AR++FD M ERN
Sbjct: 290 LLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERN 349
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
IVSWN++I Y QN +ALE+F M+ G+ P E TL V+SA L + G +IH
Sbjct: 350 IVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIH 409
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ ++ L+L NA++DMYAKCG ++ A +F MP +N+VS SM+S YA
Sbjct: 410 CNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHA 469
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K A +F +M+ + P H TF +L+AC
Sbjct: 470 KKALTLFDQMIGSGLK-------------------------------PDHITFIGVLSAC 498
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
+ + G QAH +++ G E ++D+ + G +++ + M +E
Sbjct: 499 SYGGFVSEG-QAHFESMENCF----GVEPKREHYACMVDLLSRVGLLKEAYELISRMPME 553
Query: 455 RDWVSWNAMIVGCAQNG 471
W A++ C ++G
Sbjct: 554 ASEGGWGALLDACRKHG 570
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 332/572 (58%), Gaps = 46/572 (8%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMG 189
R EAL Y ++ L F L CA + FK G VH L + + +
Sbjct: 42 RLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA 101
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+ LI MY +CGR AR+VFD M RN+ SWN ++ Y + G ++A ++F RMM E
Sbjct: 102 NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM----E 157
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMR----------------CEKLR-------- 285
D V+ ++V A A F E + ++ R C KL+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 286 ----------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++LVL +++VD YAKCG++ AR +FD M ++++ + T++VSGYAK +
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
SA +F +M E+N VSW+ALI+GY +N EAL F + + + P YTF + L AC
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCAC 337
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
A++A L+ G+Q H ++++ R + V +SLIDMY KCG +E C +F M +
Sbjct: 338 ASIAALKHGKQVHGYLIRTYFR------CNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
+D V WN MI AQNG+G +A+ +F M+ G KPD +T I +L ACSH+GLV+EG ++
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F +M+ +HG+ P ++HY+C++DLLGRAGC E +E M +PD +W +LL C++H
Sbjct: 452 FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
NI LG VA++++E++P +S YV L+++YA LG+W V +VR+LM ++ + K+ G SWI
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
++ + F+ D+ HPL +EIYL+L+ L R
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLLEQLARH 603
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 234/491 (47%), Gaps = 83/491 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCGCLYGARK 75
L + F LL C ++K + VH + + F + N LI +Y +CG ARK
Sbjct: 60 LPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARK 119
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFDKMS +N+++WN ++ G K G +++A +LF M E+D SWN++V +A+ F+EA
Sbjct: 120 VFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEA 179
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+G + + + +SF L C + ++ QVH + + + S++ + S+++D
Sbjct: 180 IGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDA 239
Query: 196 YGKCGRVSCARRVFD-------------------------------GMRERNIVSWNSLI 224
Y KCG + CAR +FD M E+N VSW++LI
Sbjct: 240 YAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALI 299
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Y +N +AL+ F +MM GI P++ T +S + ACAS+AA K G Q+H L+R
Sbjct: 300 SGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIR-TYF 358
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFT 343
R + ++ ++L+DMY+KCG L + CVF M + +VV +M+S A
Sbjct: 359 RCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALA------------- 405
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
QNG E+A+ +F + + P TF +L+AC
Sbjct: 406 ------------------QNGHGEKAMQMFNDMVESGLKPDRITFIVILSAC-------- 439
Query: 404 GRQAHTHVVKHGLRFLSGEESD--IFVGNS----LIDMYMKCGSVEDGCRIFETM-VERD 456
+H+ +V+ GLRF D +F LID+ + G + E M + D
Sbjct: 440 ---SHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPD 496
Query: 457 WVSWNAMIVGC 467
W+A++ C
Sbjct: 497 DRVWSALLGVC 507
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 170/291 (58%), Gaps = 2/291 (0%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D+ F ++ FA +L C++ K + ++VH +++ + F S + + + ++D YAKCG +
Sbjct: 190 DMGF-NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRC 248
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR +FD+M K++ W +I++G KWG ++ AS LF MPE++ SW++++SG+A++
Sbjct: 249 ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLG 308
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL YF KM +Y+F S L ACA K G QVH L ++ + + + S+L
Sbjct: 309 HEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSL 368
Query: 193 IDMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
IDMY KCG + + VF M ++++V WN++I+ QNG A+++F M+ SG++PD
Sbjct: 369 IDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPD 428
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+T ++SAC+ +EGL+ + + D + L+D+ + G
Sbjct: 429 RITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAG 479
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 184/378 (48%), Gaps = 52/378 (13%)
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL R+ G+ ++ CA FK G +H L R +
Sbjct: 40 QGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTI 99
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ N L+ MY +CG+ EAR VFD+M +RN+ S M++GYAK V +AR +F +M+E++
Sbjct: 100 VANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD 159
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VVSWN ++ Y + G EA+GL+R +R + ++F +L C L +LQL +Q H
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHG 219
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS------------VED------------- 444
V+ ++G S++ + +S++D Y KCG V+D
Sbjct: 220 QVL------VAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273
Query: 445 ------GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+F M E++ VSW+A+I G A+N G EAL F KM+ G P+ T
Sbjct: 274 WGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSC 333
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC-------MVDLLGRAGCLDEAKTLI 551
LCAC+ ++ G++ HG ++ ++ C ++D+ + G L+ + +
Sbjct: 334 LCACASIAALKHGKQV-------HGYL-IRTYFRCNTIVVSSLIDMYSKCGMLEASCCVF 385
Query: 552 EAMPMQPDAVIWGSLLAA 569
M + D V+W ++++A
Sbjct: 386 HLMGNKQDVVVWNTMISA 403
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 361 TQNGENEEALG-LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ G EAL L RL +R PT F +LL CA + G+ H H+ G +
Sbjct: 38 SSQGRLPEALSYLDRLAQRGVRLPTG-IFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK-- 94
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
V N LI MY +CG + ++F+ M R+ SWN M+ G A+ G A L
Sbjct: 95 ---RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKL 151
Query: 480 FKKML 484
F +M+
Sbjct: 152 FDRMM 156
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 340/638 (53%), Gaps = 70/638 (10%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++VH +KS S++ + N L+++Y+K GC Y AR+VF+ M +
Sbjct: 924 KQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH---------------- 967
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
D SWNSM+S AQ E++ F+ + E ++ S L
Sbjct: 968 ---------------LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVL 1012
Query: 159 SACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
AC+ +D + Q+H K+ +D ++ + LID+Y K G++ A +F + ++
Sbjct: 1013 RACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDL 1072
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
WN+++ Y ALE+F + SG + D++TLA+ AC L +G QIHA
Sbjct: 1073 ACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAH 1132
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ +DL + + ++DMY KCG + A VF+ + + V+ TSM+S
Sbjct: 1133 AIKA-GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMIS---------- 1181
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
G NG ++AL ++ +++ V P YTF L+ A +
Sbjct: 1182 ---------------------GCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
+ L+ GRQ H +V+K SD FVG SL+DMY KCG++ED R+F+ M R+
Sbjct: 1221 VTALEQGRQLHANVIKLDCV------SDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 1274
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
WNAM+VG AQ+G EA+ LFK M G +PD V+ IG+L ACSHAGL E +Y S
Sbjct: 1275 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHS 1334
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
M ++G+ P +HY+C+VD LGRAG + EA +IE MP + A I +LL AC++ ++
Sbjct: 1335 MPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 1394
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
G+ VA +L +EP +S YVLLSN+YA RW +V RK+M+++ V K PG SWI++
Sbjct: 1395 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVK 1454
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+++F+V D+ HP IY ++ + + ++ GYVP+
Sbjct: 1455 NMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 1492
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/605 (26%), Positives = 280/605 (46%), Gaps = 96/605 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L CL S + VH IK ++F+ L+++Y+KCG + AR +FD M
Sbjct: 730 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 789
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASM------PER---------------DQCSW- 119
++V WN ++ G ++ G +A +LF+ P+ D+ W
Sbjct: 790 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWL 849
Query: 120 --------------NSMVSGFAQHDRFSE---------ALGYFVKMHSENFALSEYSFGS 156
+ F + + SE A+ FV M+ N +
Sbjct: 850 ADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLV 909
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L+A AG+ D ++G QVH + KS SDV + ++L++MY K G AR VF+ M+ +
Sbjct: 910 VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL---- 272
++SWNS+I+ Q+ +++ +F+ ++ G++PD TLASV+ AC+SL +GL
Sbjct: 970 LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLI---DGLNISR 1026
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
QIH ++ + + V L+D+Y+K GK+ E
Sbjct: 1027 QIHVHALKTGNIADSFV-ATTLIDVYSKSGKMEE-------------------------- 1059
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
A +F + ++ WNA++ GY + ++AL LF L+ + T
Sbjct: 1060 -----AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAA 1114
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC L L G+Q H H +K G +SD+ V + ++DMY+KCG + + +F +
Sbjct: 1115 KACGCLVLLDQGKQIHAHAIKAGF------DSDLHVNSGILDMYIKCGDMVNAGIVFNYI 1168
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
D V+W +MI GC NG +AL ++ +M PD T ++ A S +E+GR
Sbjct: 1169 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 1228
Query: 513 KYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+ +++ K L + D + T +VD+ + G +++A L + M ++ + +W ++L
Sbjct: 1229 QLHANVIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVGL 1284
Query: 571 KVHRN 575
H N
Sbjct: 1285 AQHGN 1289
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/576 (26%), Positives = 257/576 (44%), Gaps = 81/576 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
HARI+ S A + F+ N L+ +Y+KCG L AR+VFD +++ TWN+I+
Sbjct: 643 THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA---- 698
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
AS+ D G AQ E L F + + + + + L
Sbjct: 699 --------ASVDSND---------GNAQ-----EGLHLFRLLRASLGSTTRMTLAPVLKL 736
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C S VH K DV++ AL+++Y KCGR+ AR +FD MRER++V W
Sbjct: 737 CLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW 796
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG------LQI 274
N ++ Y Q G +A ++F SG+ PDE ++ +++ + + + EG +Q
Sbjct: 797 NMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQA 855
Query: 275 HARLMRCEKLRNDLVLGN-------------ALVDMYAKCGKLN------------EARC 309
+A + D+ N ++ + LN A
Sbjct: 856 YAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVA 915
Query: 310 VFDRMPIRNVVSETSMVSG--------------YAKASSVKSARLMFTKMLERNVVSWNA 355
D + + V ++ SG Y+K AR +F M +++SWN+
Sbjct: 916 GTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNS 975
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD-LQLGRQAHTHVVKH 414
+I+ Q+ EE++ LF L E + P H+T ++L AC++L D L + RQ H H +K
Sbjct: 976 MISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALK- 1034
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
+G +D FV +LID+Y K G +E+ +F+ + D WNAM+ G G
Sbjct: 1035 -----TGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGK 1089
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+AL LF + GEK D +T+ AC L+++G++ + K G + +
Sbjct: 1090 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGI 1148
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+D+ + G + A + + PD V W S+++ C
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISA-PDDVAWTSMISGC 1183
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 68/430 (15%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
+R++H +K+ ++ F+ LIDVY+K G +
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSKSGKM--------------------------- 1057
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
++A LF + + D WN+M+ G+ + +AL F +H + + +A
Sbjct: 1058 ----EEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATA 1113
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
AC V G Q+HA K+ + SD+++ S ++DMY KCG + A VF+ + +
Sbjct: 1114 AKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 1173
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V+W S+I+ NG AL ++ RM S + PDE T A+++ A + + A ++G Q+HA
Sbjct: 1174 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 1233
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++ + + +D +G +LVDMYAKCG + +A +F +M +RN
Sbjct: 1234 VIKLDCV-SDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN------------------- 1273
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
+ WNA++ G Q+G EEA+ LF+ +K + P +F +L+AC++
Sbjct: 1274 ------------IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 1321
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L +A+ ++ H + G E +I + L+D + G V++ ++ ETM +
Sbjct: 1322 AG---LTSEAYEYL--HSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 1376
Query: 458 VSWNAMIVGC 467
S N ++G
Sbjct: 1377 ASINRALLGA 1386
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 202/438 (46%), Gaps = 65/438 (14%)
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY- 227
+G HA + S + D ++ + L+ MY KCG +S AR+VFD ER++V+WN+++ Y
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698
Query: 228 ----EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+G A + L +F + AS +TLA V+ C + +H ++
Sbjct: 699 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI-G 757
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L D+ + ALV++Y+KCG++ +AR +FD M R+VV M+ GY + K A +F+
Sbjct: 758 LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 817
Query: 344 KMLER---------------------------------------------NVVSWNALIA 358
+ +V WN ++
Sbjct: 818 EFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLS 877
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G+N A+ F + ++ T +L A A DL+LG+Q H VK GL
Sbjct: 878 ECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGL-- 935
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+SD+ V NSL++MY K G +F M D +SWN+MI CAQ+ E++
Sbjct: 936 ----DSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVN 991
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL--APLKDHY--TCM 534
LF +L G KPDH T+ VL ACS L++ S H L + D + T +
Sbjct: 992 LFIDLLHEGLKPDHFTLASVLRACS--SLIDGLN--ISRQIHVHALKTGNIADSFVATTL 1047
Query: 535 VDLLGRAGCLDEAKTLIE 552
+D+ ++G ++EA+ L +
Sbjct: 1048 IDVYSKSGKMEEAEFLFQ 1065
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/658 (32%), Positives = 356/658 (54%), Gaps = 58/658 (8%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++SS + LL C+ ++ R +H I+K+ F ++F+ L++VY+KCG + A KV
Sbjct: 62 IESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKV 121
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F ++P R+ +W ++++G+ Q+ AL
Sbjct: 122 -------------------------------FDNLPRRNVNAWTTLLTGYVQNSHPLLAL 150
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+KM S Y+ G L+AC+ + G QVHA L K D +G++L Y
Sbjct: 151 QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFY 210
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K R+ A + F ++E++++SW S+I+ NG A+ +L F+ M++ G++P+E TL
Sbjct: 211 SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLT 270
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC + G QIH+ ++ + +++ N+++ +Y KCG L EA+ +F+ M
Sbjct: 271 SVLSACCVMLTLDLGAQIHSLSIKL-GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 329
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N+V+ +M++G+AK + E +V + + AL +F+ L
Sbjct: 330 LNLVTWNAMIAGHAK----------MMDLAEDDVAA----------HKSGSTALAMFQKL 369
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P +TF ++L+ C+NL L+ G Q H ++K SG +D+ VG +L+ MY
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIK------SGVLADVVVGTALVSMY 423
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS++ + F M R +SW +MI G A++G +AL LF+ M L G KP+ VT +
Sbjct: 424 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 483
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL ACSHAGL +E YF M K++ + P+ DH+ C++D+ R G ++EA ++ M
Sbjct: 484 GVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF 543
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P+ IW L+A C+ H LG Y A++LL+++P + YV L NM+ GRW +V +V
Sbjct: 544 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKV 603
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RKLM++ V K SWI I V F DK H + E+Y +L+ + E+K +GY P
Sbjct: 604 RKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEP 661
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 335/639 (52%), Gaps = 69/639 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L ++C + KS+ D R H ++ ++ F++N ++ +Y KCG L
Sbjct: 16 LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSL-------------- 61
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
DA ++F M ER+ SWN+++S +A++ F + F M
Sbjct: 62 -----------------ADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLE 104
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++ L + ++G Q+H+ +S S+ + +A+ +MY KCG +
Sbjct: 105 LETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEG 164
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A VF+ M E+N V+W ++ Y Q DAL +F +M+ G+E DE + V+ ACA
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAG 224
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G QIH +++ L +++ +G LVD Y KC
Sbjct: 225 LEELNFGRQIHGHIVKL-GLESEVSVGTPLVDFYVKC----------------------- 260
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
S+++SA F + E N VSW+ALI GY Q GE EEAL F L+ SV
Sbjct: 261 --------SNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDIN 312
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+T+ ++ AC+ LAD G QAH +K L ES ++I MY +CG ++
Sbjct: 313 SFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGES------AMITMYSRCGRLDY 366
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R+FE++ + D V+W A+I G A G EAL LF++M CG +P+ VT I VL ACSH
Sbjct: 367 ATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH 426
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+GLV EGR+Y SMS +G+A DHY CMVD+ RAG L EA LI +MP PDA+ W
Sbjct: 427 SGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWK 486
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
LL C +RN+ +GE A+ L +++P ++ Y+L+ N+YA G+W E VRK+M +R
Sbjct: 487 CLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERN 546
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
+ K+ CSWI + G V+ F+V DK HP +EIY L+ L
Sbjct: 547 LRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 205/434 (47%), Gaps = 40/434 (9%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M ++S S+ AC G H + ++ + ++ ++++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR+VFD MRERN+VSWN++I+ Y +NG +F M+ +P+ T + +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ + + G QIH+ +R L ++ + A+ +MY KCG L A VF++M +N V+
Sbjct: 121 LLNPSGLEIGKQIHSHAIR-SGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T ++ GY +A ER + +AL LF + E V
Sbjct: 180 WTGIMVGYTQA--------------ERQM-----------------DALALFAKMVNEGV 208
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
Y F +L ACA L +L GRQ H H+VK GL ES++ VG L+D Y+KC +
Sbjct: 209 ELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGL------ESEVSVGTPLVDFYVKCSN 262
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E + FE + E + VSW+A+I G Q G EAL F+ + + T + A
Sbjct: 263 LESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQA 322
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CS G + + K L + + M+ + R G LD A + E++ PDAV
Sbjct: 323 CSALADFNSGAQAHADAIKS-SLVAYQHGESAMITMYSRCGRLDYATRVFESID-DPDAV 380
Query: 562 IWGSLLAACKVHRN 575
W +++A N
Sbjct: 381 AWTAIIAGYAYQGN 394
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 207/461 (44%), Gaps = 89/461 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S + L S L + +++H+ I+S S + + ++Y KCG L GA VF
Sbjct: 110 NGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVF 169
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KMS KN W I+ G+ Q +R +AL
Sbjct: 170 EKMSEKNAVAWTGIMV-------------------------------GYTQAERQMDALA 198
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM +E L EY F L ACAG + G Q+H + K S+V +G+ L+D Y
Sbjct: 199 LFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYV 258
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A + F+ + E N VSW++LIT Y Q G +AL+ F + ++ + T S
Sbjct: 259 KCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS 318
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVL----GNALVDMYAKCGKLNEARCVFDR 313
+ AC++LA F G Q HA + +++ LV +A++ MY++CG+L+ A VF+
Sbjct: 319 IFQACSALADFNSGAQAHA-----DAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFES 373
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ + V+ T++++GYA G EAL LF
Sbjct: 374 IDDPDAVAWTAIIAGYA-------------------------------YQGNAPEALKLF 402
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS-- 431
R ++ V P TF +L AC +H+ +V G ++L S+ V +
Sbjct: 403 RRMQDCGVRPNAVTFIAVLTAC-----------SHSGLVIEGRQYLESMSSNYGVATTID 451
Query: 432 ----LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+Y + G +++ + +M D +SW ++ GC
Sbjct: 452 HYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGC 492
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 147/308 (47%), Gaps = 31/308 (10%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
++V + LD F+ +L +C + ++ R++H I+K SE+ + L+D Y KC
Sbjct: 202 KMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS 261
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L A K F+ +S N +W+++ITG + Q
Sbjct: 262 NLESATKAFEWISEPNDVSWSALITG-------------------------------YCQ 290
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
F EAL F + + + ++ +++ S AC+ DF G Q HA KS + +
Sbjct: 291 MGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
SA+I MY +CGR+ A RVF+ + + + V+W ++I Y G A +AL++F RM G+
Sbjct: 351 ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGV 410
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P+ VT +V++AC+ EG Q + + + + +VD+Y++ G L EA
Sbjct: 411 RPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEAL 470
Query: 309 CVFDRMPI 316
+ MP
Sbjct: 471 ELIRSMPF 478
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 346/657 (52%), Gaps = 69/657 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S FA +L C + ++H + + + N L+ +Y+KC CL ARK+F
Sbjct: 158 NSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLF 217
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D ++P+ D SWN ++SG+ Q+ EA
Sbjct: 218 D-------------------------------TLPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M S +F S L + K ++H + + DV++ SALID+Y
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYF 306
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC V A++ + V ++I+ Y NG +ALE F ++ ++P VT +S
Sbjct: 307 KCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSS 366
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ A A LAA G ++H +++ KL +G+A++DMYAKCG+L+ A VF+R+
Sbjct: 367 IFPAFAGLAALNLGKELHGSIIK-TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRIT-- 423
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
E++ + WN++I +QNG EA+ LFR +
Sbjct: 424 -----------------------------EKDAICWNSMITSCSQNGRPGEAINLFRQMG 454
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E + L+ACANL L G++ H ++K LR SD++ +SLIDMY
Sbjct: 455 MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR------SDLYAESSLIDMYA 508
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ R+F+ M E++ VSWN++I +G E L LF +ML G +PDHVT +G
Sbjct: 509 KCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLG 568
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
++ AC HAG V+EG +Y+ M++E+G+ +HY C+ D+ GRAG L EA I +MP
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFP 628
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA +WG+LL AC +H N+ L E +K L +++P NSG YVLL+N+ A G+W +V++VR
Sbjct: 629 PDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVR 688
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+M++RGV K PG SWIE+ ++F+ D HPL +IY VL L E+K+ GYVP
Sbjct: 689 SIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVP 745
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/562 (28%), Positives = 277/562 (49%), Gaps = 77/562 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C KSV + VH + ++F+ + LI +YA+ G L
Sbjct: 57 DKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHL------- 109
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA LF ++P++D WN M++G+ ++ A+
Sbjct: 110 ------------------------SDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M + +F LS CA +GTQ+H + D + + L+ MY
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYS 205
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + AR++FD + + ++VSWN +I+ Y QNG +A +F M+++GI+PD +T AS
Sbjct: 206 KCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFAS 265
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ L + K +IH ++R + D+ L +AL+D+Y KC + A+ +
Sbjct: 266 FLPCVNELLSLKHCKEIHGYIIR-HAVVLDVFLKSALIDIYFKCRDVEMAQ--------K 316
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N+ +S + V +I+GY NG+N+EAL FR L
Sbjct: 317 NLCQSSSF-----------------------DTVVCTTMISGYVLNGKNKEALEAFRWLV 353
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E + PT TF ++ A A LA L LG++ H ++K L + VG++++DMY
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL------DEKCHVGSAILDMYA 407
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG ++ CR+F + E+D + WN+MI C+QNG EA+ LF++M + G + D V++ G
Sbjct: 408 KCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISG 467
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLK-DHY--TCMVDLLGRAGCLDEAKTLIEAM 554
L AC++ + G++ M K PL+ D Y + ++D+ + G L+ ++ + + M
Sbjct: 468 ALSACANLPALHYGKEIHGLMIK----GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM 523
Query: 555 PMQPDAVIWGSLLAACKVHRNI 576
+ + V W S+++A H ++
Sbjct: 524 -QEKNEVSWNSIISAYGNHGDL 544
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 229/476 (48%), Gaps = 42/476 (8%)
Query: 96 LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFG 155
++ G + DA LF ++ +WN M+ GF +F+ AL +++KM + +Y+F
Sbjct: 3 VRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFP 62
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ AC G KMG VH ++ DV++GS+LI +Y + G +S A+ +FD + ++
Sbjct: 63 YVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQK 122
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ V WN ++ Y +NG + +A+++F+ M S I+P+ VT A V+S CAS A G Q+H
Sbjct: 123 DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLH 182
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C L D + N L+ MY+KC L AR +FD +P ++VS ++SG
Sbjct: 183 GIAVGC-GLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISG------- 234
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
Y QNG EA LFR + + P TF + L
Sbjct: 235 ------------------------YVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCV 270
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
L L+ ++ H ++++H + D+F+ ++LID+Y KC VE +
Sbjct: 271 NELLSLKHCKEIHGYIIRHAVVL------DVFLKSALIDIYFKCRDVEMAQKNLCQSSSF 324
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V MI G NG EAL F+ ++ KP VT + A + + G++
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384
Query: 516 SSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
S+ K K H + ++D+ + G LD A + + + DA+ W S++ +C
Sbjct: 385 GSIIKTK--LDEKCHVGSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSMITSC 437
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 38/305 (12%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + G + A+ +F ++ +WN +I + G + AL +++M+ +G+ PD+ T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
VV AC L + K G +H + L+ D+ +G++L+ +YA+ G L++A+ +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ++ V M++GY K NG++ A+ +F
Sbjct: 120 PQKDSVLWNVMLNGYVK-------------------------------NGDSGNAIKIFL 148
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ + P TF +L+ CA+ A L LG Q H V GL E D V N+L+
Sbjct: 149 EMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGL------ELDSPVANTLLA 202
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KC ++ ++F+T+ + D VSWN +I G QNG EA LF+ M+ G KPD +T
Sbjct: 203 MYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSIT 262
Query: 495 MIGVL 499
L
Sbjct: 263 FASFL 267
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y + S+K A+ +F + +WN +I G+T G+ AL + + V P YTF
Sbjct: 2 YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++ AC L +++G+ H V GL+ D+FVG+SLI +Y + G + D +
Sbjct: 62 PYVVKACCGLKSVKMGKIVHETVNLMGLK------EDVFVGSSLIKLYAENGHLSDAQYL 115
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + ++D V WN M+ G +NG A+ +F +M KP+ VT VL C+ ++
Sbjct: 116 FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAML 175
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ G + ++ GL ++ + + CL A+ L + +P Q D V W +++
Sbjct: 176 DLGTQ-LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP-QSDLVSWNGIIS 233
Query: 569 ACKVHRNIMLGE 580
+N ++GE
Sbjct: 234 G--YVQNGLMGE 243
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 19/151 (12%)
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY++ GS++D +F T+ +WN MI G G AL + KML G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLI 551
V+ AC V+ G+ +++ L LK+ + ++ L G L +A+ L
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVN----LMGLKEDVFVGSSLIKLYAENGHLSDAQYLF 116
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ +P Q D+V+W N+ML YV
Sbjct: 117 DNIP-QKDSVLW-----------NVMLNGYV 135
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/658 (32%), Positives = 356/658 (54%), Gaps = 58/658 (8%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++SS + LL C+ ++ R +H I+K+ F ++F+ L++VY+KCG + A KV
Sbjct: 56 IESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKV 115
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F ++P R+ +W ++++G+ Q+ AL
Sbjct: 116 -------------------------------FDNLPRRNVNAWTTLLTGYVQNSHPLLAL 144
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+KM S Y+ G L+AC+ + G QVHA L K D +G++L Y
Sbjct: 145 QLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFY 204
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K R+ A + F ++E++++SW S+I+ NG A+ +L F+ M++ G++P+E TL
Sbjct: 205 SKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLT 264
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC + G QIH+ ++ + +++ N+++ +Y KCG L EA+ +F+ M
Sbjct: 265 SVLSACCVMLTLDLGAQIHSLSIKL-GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET 323
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
N+V+ +M++G+AK + E +V + + AL +F+ L
Sbjct: 324 LNLVTWNAMIAGHAK----------MMDLAEDDVAA----------HKSGSTALAMFQKL 363
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R + P +TF ++L+ C+NL L+ G Q H ++K SG +D+ VG +L+ MY
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIK------SGVLADVVVGTALVSMY 417
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS++ + F M R +SW +MI G A++G +AL LF+ M L G KP+ VT +
Sbjct: 418 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 477
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL ACSHAGL +E YF M K++ + P+ DH+ C++D+ R G ++EA ++ M
Sbjct: 478 GVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF 537
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P+ IW L+A C+ H LG Y A++LL+++P + YV L NM+ GRW +V +V
Sbjct: 538 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKV 597
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RKLM++ V K SWI I V F DK H + E+Y +L+ + E+K +GY P
Sbjct: 598 RKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEP 655
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/588 (37%), Positives = 336/588 (57%), Gaps = 38/588 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF +++ K G + DA R+F M R+ SW +MVSG+A EA F
Sbjct: 155 SNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRL 214
Query: 142 MHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + +E+ + LSA + + MGTQ+H L+ K V + ++L+ MY K
Sbjct: 215 MLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAE 274
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A RVF +ERN ++W+++IT Y QNG A+ A +F++M +SG P E T V++
Sbjct: 275 CMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLN 334
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ + A G Q H +++ + + +ALVDMYAKCG + +A+
Sbjct: 335 ACSDMGALVVGKQTHCLMVKL-GFETQVYVKSALVDMYAKCGCIGDAK------------ 381
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
G+ + V +VV W A+I G+ QNGE+EEAL L+ + ++
Sbjct: 382 ------DGFHQLYDVD------------DVVLWTAMITGHVQNGEHEEALMLYSRMDKQG 423
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P++ T ++L ACA LA L LG+Q H ++K RF G VG +L MY KCG
Sbjct: 424 IIPSYLTVTSVLRACACLAALDLGKQLHAQILK--CRFSLGGS----VGTALSTMYSKCG 477
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++ED +F M +RD +SWN++I +Q+G G++AL +F++M L G PDH+T I +L
Sbjct: 478 NLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLS 537
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH GLV+ G YF +M+K++ L P DHY CMVD+L RAG L EAK I+++ +
Sbjct: 538 ACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGT 597
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+W +L AC+ R+ +G Y ++L+E+ +S Y+LLSN+YA +W +V RVR LM
Sbjct: 598 CLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLM 657
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
R RGV K GCSW+E+ V+VF+V +++HP + I + L L + MK
Sbjct: 658 RLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELIRLAKHMK 705
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 246/496 (49%), Gaps = 52/496 (10%)
Query: 89 NSIITGL--LKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
NS+IT L + A +FA +P RD SWNS+++ ++H S AL +F M S
Sbjct: 53 NSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLSRHHPVS-ALSHFRSMMS 111
Query: 145 ENFAL--SEYSFGSALSACAGSVDFKMGTQVHAL---LSKSRYSSDVYMGSALIDMYGKC 199
A+ S +SF +A +A A G HAL L S S++V++ +AL++MY K
Sbjct: 112 SPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKL 171
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASV 258
G VS A+RVFDGM RN VSW ++++ Y + +A E+F M+ +E +E +V
Sbjct: 172 GAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAV 231
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SA + G Q+H +++ + L + + N+LV MYAK ++ A VF RN
Sbjct: 232 LSAVSVPLGLLMGTQLHGLVLK-DGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERN 290
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
++ ++M++GYA QNGE A +F +
Sbjct: 291 SITWSAMITGYA-------------------------------QNGEANCAARMFLQMHS 319
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
PT +TF +LNAC+++ L +G+Q H +VK G E+ ++V ++L+DMY K
Sbjct: 320 SGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGF------ETQVYVKSALVDMYAK 373
Query: 439 CGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
CG + D F + + D V W AMI G QNG EAL L+ +M G P ++T+
Sbjct: 374 CGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTS 433
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+ ++ G++ + + K + T + + + G L+++ + MP
Sbjct: 434 VLRACACLAALDLGKQLHAQILKCR-FSLGGSVGTALSTMYSKCGNLEDSMVVFRRMP-D 491
Query: 558 PDAVIWGSLLAACKVH 573
D + W S+++ H
Sbjct: 492 RDVISWNSIISVFSQH 507
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 194/421 (46%), Gaps = 56/421 (13%)
Query: 161 CAGSVD--FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRE-- 214
CA S D + G +H KS +S + ++LI Y R + A VF +
Sbjct: 22 CAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAAL 81
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GIEPDEVTLASVVSACASLAAFKEGL 272
R++ SWNSL+ ++ P S AL F MM+S + P + A+ +A A + + G
Sbjct: 82 RDVASWNSLLNPLSRHHPVS-ALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGA 140
Query: 273 QIHARLMRCEKL--RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
HA + N++ + AL++MY K G +++A+ VFD M RN VS +MVSGYA
Sbjct: 141 VTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYA 200
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP---THYT 387
+EEA LFRL+ ++ CP +
Sbjct: 201 TGKC-------------------------------SEEAFELFRLMLQK--CPLEKNEFV 227
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGL-RFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
+L+A + L +G Q H V+K GL F+S E NSL+ MY K ++
Sbjct: 228 TTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVE-------NSLVTMYAKAECMDAAM 280
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
R+F + ER+ ++W+AMI G AQNG A +F +M G P T +GVL ACS G
Sbjct: 281 RVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMG 340
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
+ G++ M K G + +VD+ + GC+ +AK + D V+W ++
Sbjct: 341 ALVVGKQTHCLMVKL-GFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAM 399
Query: 567 L 567
+
Sbjct: 400 I 400
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 44/181 (24%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++HA+I+K +F+ + L +Y+KCG L + VF +M +++V +WNSII
Sbjct: 448 KQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSII------ 501
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
S F+QH R S+AL F +M E A +F + L
Sbjct: 502 -------------------------SVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLL 536
Query: 159 SACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
SAC+ G VD F+ T+ + L+ + D Y + ++D+ + G++ A+ D
Sbjct: 537 SACSHMGLVDRGWFYFRAMTKDYNLIP----TLDHY--ACMVDILSRAGQLKEAKDFIDS 590
Query: 212 M 212
+
Sbjct: 591 I 591
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/659 (34%), Positives = 358/659 (54%), Gaps = 74/659 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIK--SQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
F + + R + ++ ++K S F + F+ + I +YA+ GC+ AR++FD
Sbjct: 221 FVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFD- 279
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
ER+ WN+M+ G+ Q++ EA+ F
Sbjct: 280 ------------------------------CCLERNTEVWNTMIGGYVQNNCPIEAIDLF 309
Query: 140 VK-MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
V+ M SE F L + +F SAL+A + ++G Q+HA + KS V + +A+I MY +
Sbjct: 310 VQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSR 369
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + + +VF M ER++V+WN++++ + QNG + L + M G D VTL ++
Sbjct: 370 CGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTAL 429
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S ++L + + G Q HA L+R + + L+DMYAK G + A+ +F++
Sbjct: 430 LSLASNLRSQEIGKQAHAYLIRHGIQFEGM--DSYLIDMYAKSGLITTAQQLFEKN---- 483
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
S Y +R+ +WNA+IAGYTQNG +EE +FR +
Sbjct: 484 --------SDY-----------------DRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
++V P T ++L AC + + LG+Q H ++ L ++FVG +L+DMY K
Sbjct: 519 QNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFL------NRNVFVGTALLDMYSK 572
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G++ +F +E++ V++ MI Q+G G AL LF ML G KPD VT + +
Sbjct: 573 SGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAI 632
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS+AGLV+EG + F SM +E+ + P +HY C+ D+LGR G + EA ++ + +
Sbjct: 633 LSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEG 692
Query: 559 DAV-IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS--GPYVLLSNMYAELGRWGEVVR 615
+ IWGSLL AC++H LG+ VA KLLE+E +S G +VLLSN+YA G W V R
Sbjct: 693 NTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDR 752
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VRK MR++G++K+ GCSW+E+ GHVN FM +D +HP EIY +L+ L EMK GY P
Sbjct: 753 VRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 173/663 (26%), Positives = 311/663 (46%), Gaps = 102/663 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F+ L +C +++S+ + +H +++S F S + N L+++Y+ C
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTC--------- 152
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
T + + D R+F +M +R+ +WN+M+S + + +R EA
Sbjct: 153 ---------LTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAF 203
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALID 194
F M + SF + A D+ ++ L+ K S + D ++ S+ I
Sbjct: 204 KMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIF 263
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEV 253
MY + G V AR +FD ERN WN++I Y QN +A+++FV++M S D+V
Sbjct: 264 MYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDV 323
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T S ++A + L + G Q+HA +++ + ++L NA++ MY++CG
Sbjct: 324 TFLSALTAISQLQWLELGRQLHAYILKSSTILQVVIL-NAIIVMYSRCG----------- 371
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
S+ ++ +F+ MLER+VV+WN +++ + QNG ++E L L
Sbjct: 372 --------------------SIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLV 411
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++++ T LL+ +NL ++G+QAH ++++HG++F E D + LI
Sbjct: 412 FAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQF---EGMDSY----LI 464
Query: 434 DMYMKCGSVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
DMY K G + ++FE + +RD +WNAMI G QNG E +F+KM+ +P+
Sbjct: 465 DMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPN 524
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFS------------------SMSKEHGLAPLKDH--- 530
VT+ +L AC+ G + G++ M + G ++
Sbjct: 525 AVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFA 584
Query: 531 ---------YTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIML 578
YT M+ G+ G + A +L AM ++PD+V + ++L+AC +
Sbjct: 585 ETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDE 644
Query: 579 GEYVAKKL---LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
G + + + +I+PS + Y +++M LGR G VV + ++ G W
Sbjct: 645 GLRIFQSMEREYKIQPS-AEHYCCVADM---LGRVGRVVEAYEFVKGLGEEGNTFGIWGS 700
Query: 636 ILG 638
+LG
Sbjct: 701 LLG 703
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 242/516 (46%), Gaps = 56/516 (10%)
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFA 148
S ++ L + G A LF S+P WN+++ GF ++ +AL ++ +M S +
Sbjct: 42 SRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPK 101
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC--------- 199
Y+F S L ACA + K+G +H + +S + S + ++L++MY C
Sbjct: 102 FDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGT 161
Query: 200 ----GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
RRVFD MR+RN+V+WN++I+ Y + +A ++F MM GI P V+
Sbjct: 162 AYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Query: 256 ASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+V A ++ + ++ +++ +D + ++ + MYA+ G ++ AR +FD
Sbjct: 222 VNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFD-- 279
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF- 373
LERN WN +I GY QN EA+ LF
Sbjct: 280 -----------------------------CCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++++ E TF + L A + L L+LGRQ H +++K S + + N++I
Sbjct: 311 QVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILK------SSTILQVVILNAII 364
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY +CGS+ ++F M+ERD V+WN M+ QNG E L L M G D V
Sbjct: 365 VMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSV 424
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T+ +L S+ E G++ + + + HG+ + + ++D+ ++G + A+ L E
Sbjct: 425 TLTALLSLASNLRSQEIGKQAHAYLIR-HGIQ-FEGMDSYLIDMYAKSGLITTAQQLFEK 482
Query: 554 -MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
D W +++A + G V +K++E
Sbjct: 483 NSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIE 518
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/657 (34%), Positives = 356/657 (54%), Gaps = 75/657 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L +V +VH +IKS S IF+ N ++++Y+K
Sbjct: 196 FAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK--------------- 240
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
S++ + DA +F SM R+ SWNSM++GF + EA F +
Sbjct: 241 --------SLM--------VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E L++ F + + CA + Q+H + K+ D+ + +AL+ Y KC
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A ++F M +N+VSW ++I+ Y QNG A+ +F +M G+ P+ T +++++
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A A+++ QIHA +++ N +G AL D Y+K G NEA +F+ +
Sbjct: 405 ANAAVSP----SQIHALVVKT-NYENSPSVGTALSDSYSKIGDANEAAKIFELID----- 454
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
E+++V+W+A+++GY Q G+ E A+ +F L +E
Sbjct: 455 --------------------------EKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEG 488
Query: 381 VCPTHYTFGNLLNACA-NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P +TF ++LNACA A ++ G+Q H+ +K SG + + V ++L+ MY K
Sbjct: 489 VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK------SGFSNALCVSSALVTMYAKR 542
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++E +F+ V+RD VSWN+MI G AQ+G G ++L +F++M + D +T IGV+
Sbjct: 543 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 602
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAGLV EG++YF M K++ + P +HY+CMVDL RAG L++A LI MP
Sbjct: 603 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 662
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A IW +LLAAC+VH N+ LGE A+KL+ ++P +S YVLLSN+YA G W E +VRKL
Sbjct: 663 ATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKL 722
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
M + V K+ G SWIE+ FM D HP + IYL L+ L+ +K GY P+
Sbjct: 723 MDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDT 779
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 232/474 (48%), Gaps = 59/474 (12%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ +LF P++ N ++ F+++D+ EAL F+ + S L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D +G QVH K + DV +G++L+DMY K V RVFD MR +N+VSW SL
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y QNG AL++F +M GI+P+ T A+V+ A+ A ++G+Q+H +++
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-SG 223
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L + + +GN++V+MY+K +++A+ VFD M RN VS
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS---------------------- 261
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
WN++IAG+ NG + EA LF ++ E V T F ++ CAN+ ++
Sbjct: 262 ---------WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSF 312
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNA 462
+Q H V+K+G F D+ + +L+ Y KC ++D ++F M ++ VSW A
Sbjct: 313 AKQLHCQVIKNGSDF------DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
+I G QNG A+ LF +M G +P+H T +L A + S S+ H
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV-----------SPSQIH 415
Query: 523 GLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
L +K +Y T + D + G +EA + E + + D V W ++L+
Sbjct: 416 ALV-VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELID-EKDIVAWSAMLSG 467
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 199/380 (52%), Gaps = 45/380 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L + FA ++ C K +S +++H ++IK+ ++ I+ L+ Y+KC + A K+
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 77 FDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F M +NV +W +II+G + Q+ R A
Sbjct: 352 FCMMHGVQNVVSWTAIISG-------------------------------YVQNGRTDRA 380
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F +M E + +++ + L+A A +Q+HAL+ K+ Y + +G+AL D
Sbjct: 381 MNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDS 436
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + A ++F+ + E++IV+W+++++ Y Q G A+++F+++ G+EP+E T
Sbjct: 437 YSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTF 496
Query: 256 ASVVSACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+SV++ACA+ A+ ++G Q H+ ++ N L + +ALV MYAK G + A VF R
Sbjct: 497 SSVLNACAAPTASVEQGKQFHSCSIK-SGFSNALCVSSALVTMYAKRGNIESANEVFKRQ 555
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEAL 370
R++VS SM+SGYA+ K + +F +M +N+ +++ +I+ T G E
Sbjct: 556 VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQ 615
Query: 371 GLFRLLKRE-SVCPT--HYT 387
F L+ ++ + PT HY+
Sbjct: 616 RYFDLMVKDYHIVPTMEHYS 635
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 202/457 (44%), Gaps = 77/457 (16%)
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
++++FD ++ + N L+ + +N +AL +F+ + SG D +L+ V+ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G Q+H + ++C D+ +G +LVDM
Sbjct: 105 LFDRIVGKQVHCQCIKC-GFVEDVSVGTSLVDM--------------------------- 136
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
Y K SV+ +F +M +NVVSW +L+AGY QNG NE+AL LF ++ E + P
Sbjct: 137 ----YMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+TF +L A ++ G Q HT V+K GL +S IFVGNS+++MY K V D
Sbjct: 193 PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL------DSTIFVGNSMVNMYSKSLMVSD 246
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS- 503
+F++M R+ VSWN+MI G NG EA LF +M L G K V+ C+
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Query: 504 ----------HAGLVEEGRKY---------------------FSSMSKEHGLAPLKDHYT 532
H +++ G + F HG+ + +T
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVS-WT 365
Query: 533 CMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
++ + G D A L M ++P+ + ++L A + V K E
Sbjct: 366 AIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYEN 425
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
PS LS+ Y+++G E ++ +L+ ++ +V
Sbjct: 426 SPSVG---TALSDSYSKIGDANEAAKIFELIDEKDIV 459
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 348/651 (53%), Gaps = 67/651 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF-DKMSNKN 84
L + K++S + +H+ ++ + F + LI++Y+KC + A +F D N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
VF +N+II+G + GF PE E ++ KM +
Sbjct: 104 VFAFNAIISGFITNGF-----------PE--------------------EGFEFYQKMRN 132
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E +++F A+ AC ++ K ++H LL K DV++GSAL++ Y K G +
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A+ F+ + R++V WN+++ Y Q G LE F RM + P T+ V+S A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ G IH M+ + + + N+L+DMY KC +C+ D + I
Sbjct: 250 MGDLNNGRIIHGFAMKM-GYDSGVAVSNSLIDMYGKC------KCIEDALEI-------- 294
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
F M E+++ SWN++++ + Q G+++ L L + + P
Sbjct: 295 -----------------FEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T +L AC++LA L GR+ H +++ GL + D+ + N++IDMY KCGS+ D
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+FE M +D SWN MI+G +GYG EAL +F +M KPD VT +GVL ACSH
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
AG V +GR + M ++ +AP +HYTC++D+LGRAG LDEA L MP++ + V+W
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LLAAC++H++ +L E A+++ E+EP + G YVL+SN+Y +GR+ EV+ VR MR++
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
V K PGCSWIE+ V+VF+ D+ HP IY L LT ++ GYVP+
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPD 628
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA------SEIF 55
T R + +++G D +L +C ++ R +H +I S ++
Sbjct: 321 GTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVL 380
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
++N +ID+YAKCG + A VF++MSNK+V +WN +I G
Sbjct: 381 LKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG--------------------- 419
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+ H +EAL F +M E +F LSAC+ + G
Sbjct: 420 ----------YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 176 LLSKSRY--SSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ KS+Y + + + +IDM G+ G++ A + M E N V W +L+
Sbjct: 470 QM-KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 354/681 (51%), Gaps = 76/681 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F+ L C R+ + R +HA I S + + N LID+Y KCG
Sbjct: 39 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCG-------- 90
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
ID A +F S E D SWNS+++G+ + E L
Sbjct: 91 -----------------------RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEML 127
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG--SVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
VKM L+ Y+ GSAL AC S + G +H K DV +G+AL+D
Sbjct: 128 RLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLD 187
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ-----NGPASDALEVFVRMMASGIE 249
Y K G + A ++F M + N+V +N++I + Q + A++A+ +F M + G++
Sbjct: 188 TYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMK 247
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P E T +S++ AC+++ AF+ G QIHA++ + L++D +GNALV++Y+ G + +
Sbjct: 248 PSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGLK 306
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
F P + +VVSW +LI G+ QNG+ E
Sbjct: 307 CFHSTP-------------------------------KLDVVSWTSLIVGHVQNGQFEGG 335
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF L P +T +L+ACANLA ++ G Q H + +K G+ + +
Sbjct: 336 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFT------IIQ 389
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NS I MY KCG ++ F+ D VSW+ MI AQ+G EA+ LF+ M G
Sbjct: 390 NSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIA 449
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+H+T +GVL ACSH GLVEEG +YF M K+HG+ P H C+VDLLGRAG L EA++
Sbjct: 450 PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAES 509
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
I + D V+W SLL+AC+VH+ G+ VA++++E+EP + YVLL N+Y + G
Sbjct: 510 FIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGI 569
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
+R LM+ RGV K+PG SWIE+ V+ F+ D+ HP ++ IY+ L+ + E+K+
Sbjct: 570 QMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 629
Query: 670 VGYVPNASDDEAYEEQNGSNS 690
+ Y+ +A E ++ NS
Sbjct: 630 LDYIDEKLVSDASEPKHKDNS 650
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 237/466 (50%), Gaps = 39/466 (8%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
MP+R+ SWNS++SG+ Q + E + F + + L +++F +ALS C ++D ++G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+HAL++ S V + ++LIDMY KCGR+ AR VF+ E + VSWNSLI Y +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE---KLRND 287
G + L + V+M+ G+ + L S + AC S F ++ L C L D
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS--NFSSSIECGKMLHGCAVKLGLDLD 178
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+V+G AL+D YAK G L +A +F MP NVV +M++G+ + ++ F
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADE---FAN--- 232
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
EA+ LF ++ + P+ +TF ++L AC+ + + G+Q
Sbjct: 233 --------------------EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQI 272
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H + K+ L +SD F+GN+L+++Y GS+EDG + F + + D VSW ++IVG
Sbjct: 273 HAQIFKYNL------QSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGH 326
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
QNG L LF ++L G KPD T+ +L AC++ V+ G + + K G+
Sbjct: 327 VQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKT-GIGNF 385
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + G +D A + PD V W ++++ H
Sbjct: 386 TIIQNSQICMYAKCGDIDSANMTFKETK-NPDIVSWSVMISSNAQH 430
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/671 (34%), Positives = 360/671 (53%), Gaps = 78/671 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRR----VHARIIKSQFA-SEIFIQNRLIDVYAKC 67
DL ++S LL + ++ + +R VHA + +S + I I N L+++Y KC
Sbjct: 445 DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKC 504
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
ID+A +F MP +D SWNSM+SG
Sbjct: 505 TA-------------------------------IDNACSVFQLMPSKDTVSWNSMISGLD 533
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
++RF EA+ F M S +S S LS+C+ +G Q+H K DV
Sbjct: 534 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 593
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ-NGPASDALEVFVRMMAS 246
+ +AL+ +Y + ++ ++VF M E + VSWNS I + AL+ F+ MM +
Sbjct: 594 VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 653
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G P+ VT ++++A +S + G QIHA +++ + +D + NAL+ Y KC ++ +
Sbjct: 654 GWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIENALLAFYGKCEQMED 712
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGE 365
++F++M ER + VSWN++I+GY +G
Sbjct: 713 CE-------------------------------IIFSRMSERRDEVSWNSMISGYLHSGI 741
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+A+ L + + +TF +L+ACA++A L+ G + H V+ L ESD
Sbjct: 742 LHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACL------ESD 795
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ VG++L+DMY KCG ++ R FE M R+ SWN+MI G A++G+G +AL +F +M
Sbjct: 796 VVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQ 855
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G+ PDHVT +GVL ACSH GLV+EG K+F SM + +GL+P +H++CMVDLLGRAG +
Sbjct: 856 HGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVK 915
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNM 603
+ + I+ MPM P+ +IW ++L AC RN LG+ AK L+E+EP N+ YVLLSNM
Sbjct: 916 KIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNM 975
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
+A G W +VV R MRK V K GCSW+ + V++F+ D+ HP ++IY LK L
Sbjct: 976 HAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKEL 1035
Query: 664 TREMKRVGYVP 674
+++ GYVP
Sbjct: 1036 MNKIRDAGYVP 1046
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 262/546 (47%), Gaps = 74/546 (13%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSI 91
S S+ D +H ++ K+ F ++F N LI++Y + G L ARK
Sbjct: 153 SSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARK---------------- 196
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
LF MP+++ SW+ ++SG+ Q+ EA F + S +
Sbjct: 197 ---------------LFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNH 241
Query: 152 YSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC-GRVSCARRV 208
++ GSAL AC GS K+G Q+HA + K SD+ + + L+ MY C G + A RV
Sbjct: 242 FAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRV 301
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE----PDEVTLASVVSACAS 264
FD ++ RN V+WNS+I+ Y + G A A ++F M G+E P+E TL S+V+A S
Sbjct: 302 FDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS 361
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA C LVL ++ K G L R++ ++
Sbjct: 362 LA-------------DC-----GLVLLEQMLTRIEKSGFL------------RDLYVGSA 391
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
+V+G+A+ + A+++F +M +RN V+ N L+ G + + EEA +F+ +K + V
Sbjct: 392 LVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEIN 450
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG-EESDIFVGNSLIDMYMKCGSVE 443
+ LL+ ++L+ G++ V H F SG ++ I +GN+L++MY KC +++
Sbjct: 451 SESLVVLLSTFTEFSNLKEGKRKGQEV--HAYLFRSGLVDARISIGNALVNMYGKCTAID 508
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ C +F+ M +D VSWN+MI G N EA+ F M G P + ++I L +CS
Sbjct: 509 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCS 568
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
G + GR+ K GL ++ L ++E + + MP + D V W
Sbjct: 569 SLGWLTLGRQIHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSW 626
Query: 564 GSLLAA 569
S + A
Sbjct: 627 NSFIGA 632
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 252/549 (45%), Gaps = 81/549 (14%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++HA I K S++ + N L+ +Y+ C G
Sbjct: 264 QIHAFICKLPCVSDMILSNVLMSMYSDCS------------------------------G 293
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE----NFALSEYSFG 155
IDDA R+F + R+ +WNS++S + + A F M E N +EY+
Sbjct: 294 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLC 353
Query: 156 SALSACAGSVD--FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
S ++A D + Q+ + KS + D+Y+GSAL++ + + G + CA+ +F M
Sbjct: 354 SLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMY 413
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG-- 271
+RN V+ N L+ + +A +VF + M +E + +L ++S + KEG
Sbjct: 414 DRNAVTMNGLMVGLARQHQGEEAAKVF-KEMKDLVEINSESLVVLLSTFTEFSNLKEGKR 472
Query: 272 --LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
++HA L R + + +GNALV+MY KC ++ A V
Sbjct: 473 KGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSV------------------- 513
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
F M ++ VSWN++I+G N EEA+ F +KR + P++++
Sbjct: 514 ------------FQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVI 561
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+ L++C++L L LGRQ H K GL + D+ V N+L+ +Y + S+ + ++F
Sbjct: 562 STLSSCSSLGWLTLGRQIHGEGFKWGL------DLDVSVSNALLTLYAETDSINECQKVF 615
Query: 450 ETMVERDWVSWNAMIVGCAQ-NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
M E D VSWN+ I A+ +AL F +M+ G +P+ VT I +L A S ++
Sbjct: 616 FQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVL 675
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G + + + K + +A ++ G+ +++ + + M + D V W S+++
Sbjct: 676 GLGHQIHALILK-YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Query: 569 ACKVHRNIM 577
+H I+
Sbjct: 735 G-YLHSGIL 742
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 323/543 (59%), Gaps = 8/543 (1%)
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A+ + +M + Y+F L A A VHA + K + ++ ++L+
Sbjct: 26 DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y G + AR + V WN+LI+ + + +A FV M +G P V
Sbjct: 86 TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145
Query: 254 TLASVVSACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T SV+SAC G+Q+H R++ L DL + NALVDMYA+C + A +FD
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVL-PDLRVENALVDMYAECADMESAWKLFD 204
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M +R+VVS TS++SG + V AR +F +M ER+ VSW A+I GY Q EAL +
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
FR ++ +V +T +++ ACA L L++G ++ + G++ D FVGN+L
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM------DAFVGNAL 318
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCGS+E +F+ M RD +W A+I+G A NGYG EA+ +F +M+ E PD
Sbjct: 319 IDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDE 378
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT IGVL AC+HAGLV++GR++F SM + + +AP HY C++DL GRAG + EA I+
Sbjct: 379 VTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAID 438
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MPM P++ IWG+LLAAC+VH N +GE V ++LL+++P NS Y LLSN+YA+ RW +
Sbjct: 439 QMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWED 498
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R+R + ++G+ K+PGCS IE+ G ++ F+ D+ HP++KEIY L+ + ++ VGY
Sbjct: 499 VRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGY 558
Query: 673 VPN 675
P+
Sbjct: 559 FPD 561
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 169/311 (54%), Gaps = 9/311 (2%)
Query: 13 DLAFLDSSP----FAKLLDSCLRSKSVSDT---RRVHARIIKSQFASEIFIQNRLIDVYA 65
D+A ++P + +L +C K D +VH R++ S ++ ++N L+D+YA
Sbjct: 134 DMARAGAAPTPVTYVSVLSAC--GKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYA 191
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+C + A K+FD M ++V +W S+++GL + G +D+A LF MPERD SW +M+ G
Sbjct: 192 ECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDG 251
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+ Q RF EAL F +M N + E++ S ++ACA +MG V +S+ D
Sbjct: 252 YVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 311
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
++G+ALIDMY KCG + A VF M R+ +W ++I NG +A+E+F RM+
Sbjct: 312 AFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIG 371
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
PDEVT V++AC +G + + + ++V ++D++ + GK+
Sbjct: 372 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKIT 431
Query: 306 EARCVFDRMPI 316
EA D+MP+
Sbjct: 432 EALDAIDQMPM 442
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 200/495 (40%), Gaps = 111/495 (22%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A D+ F LL + R S + R VHA ++K
Sbjct: 39 AMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVK--------------------------- 71
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F N +V T S++T G A L + WN+++SG + RF E
Sbjct: 72 --FGMGRNAHVAT--SLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGE 127
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACA-GSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A FV M A + ++ S LSAC G+ D +G QVH + S D+ + +AL+
Sbjct: 128 ACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALV 187
Query: 194 DMYGKC-------------------------------GRVSCARRVFDGMRERNIVSWNS 222
DMY +C GRV AR +F M ER+ VSW +
Sbjct: 188 DMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTA 247
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y Q +ALE+F M S + DE T+ SV++ACA L A + G + + R +
Sbjct: 248 MIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR-Q 306
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
++ D +GNAL+DMY+KCG + A VF M R+ F
Sbjct: 307 GIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRD----------------------KF 344
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
T W A+I G NG EEA+ +F + S P TF +L AC + +
Sbjct: 345 T---------WTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVD 395
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGN-----SLIDMYMKCGSVEDGCRIFETM-VERD 456
GR+ FLS E+ N +ID++ + G + + + M + +
Sbjct: 396 KGREF----------FLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPN 445
Query: 457 WVSWNAMIVGCAQNG 471
W ++ C +G
Sbjct: 446 STIWGTLLAACRVHG 460
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/657 (35%), Positives = 363/657 (55%), Gaps = 72/657 (10%)
Query: 24 KLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQ-NRLIDVYAKCGCLYGARKVFDKMS 81
+LL +K++ + +HA II +Q + +Q N LI++YAKC + AR +FD
Sbjct: 30 QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFD--- 86
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M +R+ SW ++++G+ + E L F
Sbjct: 87 ----------------------------GMRKRNVVSWGALMAGYFHNGLVLEVLRLFKT 118
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S ++ +EY F + +S+C+ S G Q H KS Y+ +ALI MY +
Sbjct: 119 MISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRS 178
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
V A V+ + ++ S+N +I +NG S+ALEV RM+ I D VT +
Sbjct: 179 DVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFG 238
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
C+ L + GLQ+H R+ R D + +A++DMY KCG
Sbjct: 239 LCSHLKDLRLGLQVHCRMFRTGA-EYDSFVSSAIIDMYGKCG------------------ 279
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
++ +AR +F ++ +NVVSW A++A Y+QNG EEAL F ++ +
Sbjct: 280 -------------NILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDG 326
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P YTF LLN+CA ++ L G+ HT + K SG E I VGN+LI+MY K G
Sbjct: 327 LLPNEYTFAVLLNSCAGISALGHGKLLHTRIKK------SGFEDHIIVGNALINMYSKSG 380
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
S+E ++F M+ RD ++W+AMI G + +G G EAL +F++ML E P +VT +GVL
Sbjct: 381 SIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLS 440
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+H G V+EG Y + + K+ G+ P +HYTC+V LL +AG LDEA+ +++ P++ D
Sbjct: 441 ACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDV 500
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
V W +LL+AC VH+N LG+ VA+ +L+++P + G Y+LLSNMYA+ RW VV++RKLM
Sbjct: 501 VAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLM 560
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R+R V K+PG SWIEI ++VF+ + K HP + +IY ++ L ++ +GYVP+ +
Sbjct: 561 RERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIA 617
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 215/454 (47%), Gaps = 70/454 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA ++ SC S V + + H +KS +++N LI +Y++ + GA V+ ++
Sbjct: 132 FATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP 191
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+VF++N II GLL+ G+ P SEAL +
Sbjct: 192 GLDVFSYNIIINGLLENGY-----------P--------------------SEALEVLDR 220
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E ++ +A C+ D ++G QVH + ++ D ++ SA+IDMYGKCG
Sbjct: 221 MVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGN 280
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR+VF+ ++ +N+VSW +++ Y QNG +AL F M G+ P+E T A ++++
Sbjct: 281 ILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA ++A G +H R+ + + +++GNAL++MY+K G + A VF M R+ ++
Sbjct: 341 CAGISALGHGKLLHTRIKK-SGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSIT 399
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++M I G + +G EAL +F+ +
Sbjct: 400 WSAM-------------------------------ICGLSHHGLGREALVVFQEMLAAKE 428
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
CP + TF +L+ACA+L +Q G ++K +G E + ++ + K G
Sbjct: 429 CPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQ-----TGIEPGVEHYTCIVGLLCKAGR 483
Query: 442 VEDGCRIFE-TMVERDWVSWNAMIVGC-AQNGYG 473
+++ + T V+ D V+W ++ C YG
Sbjct: 484 LDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYG 517
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 158/323 (48%), Gaps = 32/323 (9%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+ ++V + D+ + C K + +VH R+ ++ + F+ + +ID+Y K
Sbjct: 218 LDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGK 277
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG + ARKVF+++ KNV +W +I+ + +
Sbjct: 278 CGNILNARKVFNRLQTKNVVSWTAIL-------------------------------AAY 306
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+Q+ F EAL +F +M + +EY+F L++CAG G +H + KS + +
Sbjct: 307 SQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHI 366
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+G+ALI+MY K G + A +VF M R+ ++W+++I +G +AL VF M+A+
Sbjct: 367 IVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAA 426
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
P VT V+SACA L + +EG +LM+ + + +V + K G+L+E
Sbjct: 427 KECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDE 486
Query: 307 ARCVFDRMPIR-NVVSETSMVSG 328
A P++ +VV+ +++S
Sbjct: 487 AENFMKSTPVKWDVVAWRTLLSA 509
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL+SC ++ + +H RI KS F I + N LI++Y+K G + A KVF +M
Sbjct: 334 FAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMI 393
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC----SWNSMVSGFAQHDRFSEALG 137
++ TW+++I GL G +A +F M +C ++ ++S A E
Sbjct: 394 CRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFY 453
Query: 138 YFVKM---------------------------HSENFALSE------YSFGSALSACAGS 164
Y ++ +ENF S ++ + LSAC
Sbjct: 454 YLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVH 513
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
++ +G +V L+ + DV L +MY K R ++ MRERN+
Sbjct: 514 QNYGLGKKVAELVLQMD-PGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNV 565
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 337/607 (55%), Gaps = 56/607 (9%)
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARK+FD+M ++N+ +WN +++G +K G ID+A ++F MPER+ SW ++V G+ + +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
A F KM +N + S+ L +++ ++ D +++
Sbjct: 127 DVAESLFWKMPEKN----KVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSM 178
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I K GRV AR +FD M ER++++W +++T Y QN DA ++F M E E
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTE 234
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
V+ S +++G Y + G++ +A +F+
Sbjct: 235 VSWTS------------------------------MLMG------YVQNGRIEDAEELFE 258
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
MP++ V++ +M+SG + + AR +F M ERN SW +I + +NG EAL L
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L++++ V PT T ++L+ CA+LA L G+Q H +V+ + D++V + L
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF------DVDVYVASVL 372
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPD 491
+ MY+KCG + IF+ +D + WN++I G A +G G EAL +F +M L G KP+
Sbjct: 373 MTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT + L ACS+AG+VEEG K + SM G+ P+ HY CMVD+LGRAG +EA +I
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
++M ++PDA +WGSLL AC+ H + + E+ AKKL+EIEP NSG Y+LLSNMYA GRW
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHPLNKEIYLVLKMLTREMKRV 670
+V +RKLM+ R V K PGCSW E+ V+ F HP + I +L L ++
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612
Query: 671 GYVPNAS 677
GY P+ S
Sbjct: 613 GYNPDCS 619
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 1/254 (0%)
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y + G + A ++F+ M K V N++I+GL + G I A R+F SM ER+ SW +++
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
++ EAL F+ M + + + S LS CA G QVHA L + ++
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
DVY+ S L+ MY KCG + ++ +FD ++I+ WNS+I+ Y +G +AL+VF M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 244 MASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
SG +P+EVT + +SAC+ +EGL+I+ + ++ +VDM + G
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 303 KLNEARCVFDRMPI 316
+ NEA + D M +
Sbjct: 484 RFNEAMEMIDSMTV 497
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 214/525 (40%), Gaps = 132/525 (25%)
Query: 24 KLLDSCLRSKSVSDTRRVHA------------RIIKSQFASEIFIQNRLIDVYAKCGCLY 71
KL DSC SKS+S + A ++ I N L+ Y K G +
Sbjct: 38 KLFDSC-DSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEID 96
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
ARKVFD M +NV +W +++ G + G +D A LF MPE+++ SW M+ GF Q R
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGR 156
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+A + +M + ++ S L G VD + + + S V +
Sbjct: 157 IDDACKLY-EMIPDKDNIARTSMIHGLCK-EGRVD-----EAREIFDEMSERS-VITWTT 208
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-------- 243
++ YG+ RV AR++FD M E+ VSW S++ Y QNG DA E+F M
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 244 --MASGI-EPDEVTLASVVSACA---SLAAFKEGLQIHAR------------LMRCEKLR 285
M SG+ + E+ A V + A+++ ++IH R LM+ + +R
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 286 N-----------------------------------DLVLGNALVDMYAKCGKLNEARCV 310
D+ + + L+ MY KCG+L +++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FDR P ++++ S++SGYA +G EEAL
Sbjct: 389 FDRFPSKDIIMWNSIISGYA-------------------------------SHGLGEEAL 417
Query: 371 GLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+F + S P TF L+AC ++ +V+ GL+ ES V
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSAC-----------SYAGMVEEGLKIYESMESVFGVK 466
Query: 430 N------SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++DM + G + + ++M VE D W +++ C
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 61/329 (18%)
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N + ++ GK++EAR +FD +++ S SMV+GY + AR +F +M +RN+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SWN L++GY +NGE +EA +F L+
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMP--------------------------------- 106
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
E ++ +L+ Y+ G V+ +F M E++ VSW M++G Q+
Sbjct: 107 ------------ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G +A L+ +M+ + +MI LC G V+E R+ F MS+ +
Sbjct: 155 GRIDDACKLY-EMIPDKDNIARTSMIHGLCK---EGRVDEAREIFDEMSERSVIT----- 205
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
+T MV G+ +D+A+ + + MP + + V W S+L + I A++L E+
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNGRI----EDAEELFEVM 260
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
P P + + M + LG+ GE+ + R++
Sbjct: 261 PVK--PVIACNAMISGLGQKGEIAKARRV 287
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/584 (38%), Positives = 337/584 (57%), Gaps = 53/584 (9%)
Query: 105 SRLFASMPER-DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+ LF +R D SWNS+++ A+ E+L F M + + +F A+ +C+
Sbjct: 35 TTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSA 94
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D G Q H + SD+++ SALIDMY KCG++S AR +FD + RNIV+W SL
Sbjct: 95 LFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154
Query: 224 ITCYEQNGPASDALEVFVRMMAS---------GIEPDEVTLASVVSACASLA--AFKEGL 272
IT Y QN A +AL VF + G D V + SV+SAC+ ++ A EG
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG- 213
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+H + K+ D V+G E +++ YAK
Sbjct: 214 -VHGVAI---KVGLDKVMG-----------------------------VENTLLDAYAKC 240
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNL 391
V +R +F M E++VVSWN++IA Y QNG + +A +F +LK T L
Sbjct: 241 GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTL 300
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L ACA+ L++G H V+K G +++ + S+IDMY KCG E F+
Sbjct: 301 LLACAHEGALRVGMCLHDQVIKMGYV------NNVIMATSIIDMYCKCGQAEMARNAFDG 354
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M E++ SW AMI G +G+ EAL +F +M+ G KP+++T I VL ACSHAG +EEG
Sbjct: 355 MKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
++F++MS E+ + P +HY CMVDLLGRAG + EA LI++M ++ D V+WGSLLAAC+
Sbjct: 415 WRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACR 474
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H+++ L E A++L +++PSN G YVLL+N+YA+ GRW +V R+R L++ RG+VK PG
Sbjct: 475 IHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGY 534
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
S +E+ G V+VF+V DK HP +++IY L+ L+ +++ GYVPN
Sbjct: 535 SLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPN 578
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 228/457 (49%), Gaps = 71/457 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F + SC ++ ++ H + + F S++F+ + LID+Y+KCG L AR +F
Sbjct: 81 NRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLF 140
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +N+ TW S+ITG ++ DDA E F + + E +G
Sbjct: 141 DEIPRRNIVTWTSLITGYVQ---NDDAHEALMVFKE----------FLFEKSEGNGEEVG 187
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ + S LSAC+ + + VH + K + + + L+D Y
Sbjct: 188 T---------SVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYA 238
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLA 256
KCG VS +R+VFD M E+++VSWNS+I Y QNG ++DA EVF M+ A G + +EVTL+
Sbjct: 239 KCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLS 298
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++ ACA A + G+ +H ++++ + N++++ +++DMY KCG+ AR FD M
Sbjct: 299 TLLLACAHEGALRVGMCLHDQVIKMGYV-NNVIMATSIIDMYCKCGQAEMARNAFDGMKE 357
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+NV S T+M+ AGY +G EAL +F +
Sbjct: 358 KNVRSWTAMI-------------------------------AGYGMHGFAREALDVFYQM 386
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQ-----AHTHVVKHGLRFLSGEESDIFVGNS 431
V P + TF ++L AC++ L+ G + +H + V+ G+
Sbjct: 387 IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYG----------C 436
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ + ++M V RD+V W +++ C
Sbjct: 437 MVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAAC 473
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 30/301 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS +L +C R + + + VH IK + ++N L+D YAKCG + +RKV
Sbjct: 190 VDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV 249
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M+ K+V +WNS+I + G DA +F M + +N
Sbjct: 250 FDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYN---------------- 293
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
E + + L ACA ++G +H + K Y ++V M +++IDMY
Sbjct: 294 --------------EVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG+ AR FDGM+E+N+ SW ++I Y +G A +AL+VF +M+ +G++P+ +T
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFI 399
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV++AC+ +EG + + + + +VD+ + G + EA + M +
Sbjct: 400 SVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKV 459
Query: 317 R 317
R
Sbjct: 460 R 460
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/607 (36%), Positives = 331/607 (54%), Gaps = 49/607 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++ + + G +D A +F ERD SWN+M+ +AQH SEA F +M E
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
S+ + +A + C+ + G +HA + D+ +G+AL+DMY +CG AR +
Sbjct: 324 PSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS---- 264
F+G+ N VSWN++I Q G ALE+F RM G+ P T +++ A AS
Sbjct: 381 FEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEE 439
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
A EG ++H+R++ C ++ +G A+V MYA CG ++EA F R + +
Sbjct: 440 ARAMAEGRKLHSRIVSC-GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED------ 492
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
+VVSWNA+I+ +Q+G + ALG FR + V P
Sbjct: 493 ----------------------RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPN 530
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T +L+ACA A L G H H+ +H SG ES++FV +L MY +CGS+E
Sbjct: 531 QITCVAVLDACAGAAALTEGVIVHDHL-RH-----SGMESNVFVATALASMYGRCGSLES 584
Query: 445 GCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
IFE + VERD V +NAMI +QNG EAL LF +M G +PD + + VL ACS
Sbjct: 585 AREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACS 644
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GL +EG + F SM + +G+AP +DHY C VD+LGRAG L +A+ LI M ++P ++W
Sbjct: 645 HGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVW 704
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
+LL AC+ +R++ G + E++P + YV+LSN+ A G+W E VR M R
Sbjct: 705 KTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESR 764
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA-----SD 678
G+ KQ G SWIEI V+ F+ D+ HP ++EIY L+ L E++ +GYVP+
Sbjct: 765 GLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKV 824
Query: 679 DEAYEEQ 685
DEA +E+
Sbjct: 825 DEAEKER 831
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 273/559 (48%), Gaps = 85/559 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C R +S R +HA I++S + + N L+ +Y CGC+ A +F
Sbjct: 127 DAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLF 186
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ERD SWN+ ++ AQ AL
Sbjct: 187 ERM--------------------------------ERDLVSWNAAIAANAQSGDLDMALE 214
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E + + LS CA + +H+++ +S + + +AL Y
Sbjct: 215 LFQRMQLEGVRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYA 271
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + A+ VFD ER++VSWN+++ Y Q+G S+A +F RM+ GI P +VTL +
Sbjct: 272 RLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVN 331
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ C+SL + G IHA + + L D+VLGNAL+DMY +CG EAR +F+ +P
Sbjct: 332 ASTGCSSL---RFGRMIHACALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-G 386
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N VS +M++G +Q G+ + AL LF+ ++
Sbjct: 387 NAVSWNTMIAG-------------------------------SSQKGQMKRALELFQRMQ 415
Query: 378 RESVCPTHYTFGNLLNACANLAD----LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
E + P T+ NLL A A+ + + GR+ H+ +V G S+ +G +++
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS------CGYASEPAIGTAVV 469
Query: 434 DMYMKCGSVEDGCRIFE--TMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
MY CG++++ F+ M +R D VSWNA+I +Q+G+G ALG F++M L G P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ +T + VL AC+ A + EG + + G+ T + + GR G L+ A+ +
Sbjct: 530 NQITCVAVLDACAGAAALTEGVIVHDHL-RHSGMESNVFVATALASMYGRCGSLESAREI 588
Query: 551 IEAMPMQPDAVIWGSLLAA 569
E + ++ D VI+ +++AA
Sbjct: 589 FEKVAVERDVVIFNAMIAA 607
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 188/402 (46%), Gaps = 50/402 (12%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
G ++HA + + +G+ L+ +Y KC + VF + R+ SW ++IT
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y ++G A A+ +F RM G+ D VT +V+ ACA L +G IHA ++ L
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVE-SGLEG 161
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
VL N L+ +Y CG + A +F+RM
Sbjct: 162 KSVLANLLLHIYGSCGCVASAMLLFERM-------------------------------- 189
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ER++VSWNA IA Q+G+ + AL LF+ ++ E V P T L+ CA + RQ
Sbjct: 190 ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI------RQ 243
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
A H + SG E + V +L Y + G ++ +F+ ERD VSWNAM+
Sbjct: 244 ARA---IHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGA 300
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G+ +EA LF +ML G P VT++ CS + GR + + E GL
Sbjct: 301 YAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS---LRFGR-MIHACALEKGLDR 356
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++D+ R G +EA+ L E +P +AV W +++A
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFEGIP--GNAVSWNTMIA 396
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 261/598 (43%), Gaps = 131/598 (21%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R +HA ++ +I + N L+D+Y +CG AR +F+ + N +WN+
Sbjct: 343 RMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNT-------- 393
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
M++G +Q + AL F +M E A ++ + L
Sbjct: 394 -----------------------MIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLL 430
Query: 159 SACAGSVD----FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD--GM 212
A A + + G ++H+ + Y+S+ +G+A++ MY CG + A F M
Sbjct: 431 EAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAM 490
Query: 213 RER-NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+R ++VSWN++I+ Q+G AL F RM G+ P+++T +V+ ACA AA EG
Sbjct: 491 EDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG 550
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+ +H L R + +++ + AL MY +CG L AR +F+++ +
Sbjct: 551 VIVHDHL-RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAV--------------- 594
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
ER+VV +NA+IA Y+QNG EAL LF +++E P +F ++
Sbjct: 595 ---------------ERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSV 639
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L+AC+ HG G ++G IF +
Sbjct: 640 LSACS-----------------HG------------------------GLADEGWEIFRS 658
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEA-LGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVE 509
M + ++ + CA + G L ++++ C + KP + +L AC V+
Sbjct: 659 MRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVD 718
Query: 510 EGRKYFSSMSKEHGLAPLKDH-YTCMVDLLGRAGCLDEA---KTLIEAMPMQPDA-VIWG 564
GR +SM +E L P + Y + ++L AG DEA +T +E+ ++ A W
Sbjct: 719 RGR-LANSMVRE--LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
+ + +VH E+VA P + Y L ++AE+ G V R ++RK
Sbjct: 776 EIKS--RVH------EFVAGD--RSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRK 823
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 35/247 (14%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK--MSNK-NVFTW 88
++++++ R++H+RI+ +ASE I ++ +YA CG + A F + M ++ +V +W
Sbjct: 440 ARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSW 499
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N+II+ L +QH ALG+F +M A
Sbjct: 500 NAIISSL-------------------------------SQHGHGKRALGFFRRMDLHGVA 528
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
++ + + L ACAG+ G VH L S S+V++ +AL MYG+CG + AR +
Sbjct: 529 PNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREI 588
Query: 209 FDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
F+ + ER++V +N++I Y QNG A +AL++F RM G PDE + SV+SAC+
Sbjct: 589 FEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGL 648
Query: 268 FKEGLQI 274
EG +I
Sbjct: 649 ADEGWEI 655
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS-NK 83
+LD+C + ++++ VH + S S +F+ L +Y +CG L AR++F+K++ +
Sbjct: 537 VLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V +N+ M++ ++Q+ EAL F +M
Sbjct: 597 DVVIFNA-------------------------------MIAAYSQNGLAGEALKLFWRMQ 625
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSALIDMYGKCG 200
E E SF S LSAC+ G ++ + +S S D Y + +D+ G+ G
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY--ACAVDVLGRAG 683
Query: 201 RVSCARRVFDGMRER-NIVSWNSLI 224
++ A + M + ++ W +L+
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLL 708
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 331/572 (57%), Gaps = 46/572 (8%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMG 189
R EAL Y ++ L F L CA + FK G VH L + + +
Sbjct: 42 RLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA 101
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+ LI MY +CGR AR+VFD M RN+ SWN ++ Y + G ++A ++F RMM E
Sbjct: 102 NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM----E 157
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMR----------------CEKLR-------- 285
D V+ ++V A A F E + ++ R C KL+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 286 ----------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++LVL +++VD Y+KCG++ AR +FD M ++++ + T++VSGYAK +
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDM 277
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
SA +F +M E+N VSW+ALI+GY +N EAL F + + + P YTF + L AC
Sbjct: 278 NSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCAC 337
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
A++A L+ G+Q H ++++ R + V +SLIDMY KCG +E C +F M +
Sbjct: 338 ASIAALKHGKQVHGYLIRTYFR------CNTIVVSSLIDMYSKCGMLEASCCVFHLMGNK 391
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
+D V WN MI AQNG+G +A+ +F M+ G KPD +T I +L ACSH+GLV+EG ++
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F +M+ +HG+ P ++HY C++DLLGRAGC E +E M +PD +W +LL C++H
Sbjct: 452 FKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHN 511
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
NI LG VA++++E++P +S YV L+++YA LG+W V +VR+LM ++ + K+ G SWI
Sbjct: 512 NIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
++ + F+ D+ HPL +EIYL+L+ L R
Sbjct: 572 DVGNKTHSFIASDRLHPLKEEIYLLLEQLARH 603
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/491 (29%), Positives = 234/491 (47%), Gaps = 83/491 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCGCLYGARK 75
L + F LL C ++K + VH + + F + N LI +Y +CG ARK
Sbjct: 60 LPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARK 119
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFDKMS +N+++WN ++ G K G +++A +LF M E+D SWN++V +A+ F+EA
Sbjct: 120 VFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEA 179
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+G + + + +SF L C + ++ QVH + + + S++ + S+++D
Sbjct: 180 IGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDA 239
Query: 196 YGKCGRVSCARRVFD-------------------------------GMRERNIVSWNSLI 224
Y KCG + CAR +FD M E+N VSW++LI
Sbjct: 240 YSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALI 299
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Y +N +AL+ F +MM GI P++ T +S + ACAS+AA K G Q+H L+R
Sbjct: 300 SGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIR-TYF 358
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFT 343
R + ++ ++L+DMY+KCG L + CVF M + +VV +M+S A
Sbjct: 359 RCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALA------------- 405
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
QNG E+A+ +F + + P TF +L+AC
Sbjct: 406 ------------------QNGHGEKAMQMFNDMVESGLKPDRITFIVILSAC-------- 439
Query: 404 GRQAHTHVVKHGLRFLSGEESD--IFVGNS----LIDMYMKCGSVEDGCRIFETM-VERD 456
+H+ +V+ GLRF D +F LID+ + G + E M + D
Sbjct: 440 ---SHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPD 496
Query: 457 WVSWNAMIVGC 467
W+A++ C
Sbjct: 497 DRVWSALLGVC 507
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 169/291 (58%), Gaps = 2/291 (0%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D+ F ++ FA +L C++ K + ++VH +++ + F S + + + ++D Y+KCG +
Sbjct: 190 DMGF-NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRC 248
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR +FD+M K++ W +I++G KWG ++ AS LF MPE++ SW++++SG+A++
Sbjct: 249 ARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLG 308
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EAL YF KM +Y+F S L ACA K G QVH L ++ + + + S+L
Sbjct: 309 HEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSL 368
Query: 193 IDMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
IDMY KCG + + VF M ++++V WN++I+ QNG A+++F M+ SG++PD
Sbjct: 369 IDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPD 428
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+T ++SAC+ +EGL+ + + D L+D+ + G
Sbjct: 429 RITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAG 479
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 52/378 (13%)
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL R+ GI ++ CA FK G +H L R +
Sbjct: 40 QGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTI 99
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ N L+ MY +CG+ EAR VFD+M +RN+ S M++GYAK V +AR +F +M+E++
Sbjct: 100 VANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKD 159
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
VVSWN ++ Y + G EA+GL+R +R + ++F +L C L +LQL +Q H
Sbjct: 160 VVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHG 219
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS------------VED------------- 444
V+ ++G S++ + +S++D Y KCG V+D
Sbjct: 220 QVL------VAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAK 273
Query: 445 ------GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+F M E++ VSW+A+I G A+N G EAL F KM+ G P+ T
Sbjct: 274 WGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSC 333
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC-------MVDLLGRAGCLDEAKTLI 551
LCAC+ ++ G++ HG ++ ++ C ++D+ + G L+ + +
Sbjct: 334 LCACASIAALKHGKQV-------HGYL-IRTYFRCNTIVVSSLIDMYSKCGMLEASCCVF 385
Query: 552 EAMPMQPDAVIWGSLLAA 569
M + D V+W ++++A
Sbjct: 386 HLMGNKQDVVVWNTMISA 403
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 361 TQNGENEEALG-LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ G EAL L RL +R PT F +LL CA + G+ H H+ G +
Sbjct: 38 SSQGRLPEALSYLDRLAQRGIRLPTG-IFVDLLRLCAKAKYFKGGKCVHLHLKHTGFK-- 94
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
V N LI MY +CG + ++F+ M R+ SWN M+ G A+ G A L
Sbjct: 95 ---RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKL 151
Query: 480 FKKML 484
F +M+
Sbjct: 152 FDRMM 156
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/645 (36%), Positives = 361/645 (55%), Gaps = 38/645 (5%)
Query: 31 RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
+SK++ D ++H+R+I + F + + R+I F S+K + +
Sbjct: 23 KSKTLHDVNQIHSRLITTGFINNPSLTTRII-------------LNFSSSSHKPLVEF-- 67
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCS--WNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++ F+ SR F + WN+++ F+ + EA F M
Sbjct: 68 -----ARYLFM---SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVC 119
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ ++SF L AC+ K G Q+H LL + SDV++ + L+ +Y +CG + AR++
Sbjct: 120 VDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQL 179
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD M +R+ VS+NS+I Y ++G A E+F M ++ L S S + A
Sbjct: 180 FDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPM-----EQKNLISWNSMISGYARS 234
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+EGL++ L E + DL+ N+++D KCGK+ A +F++MP R+VVS +MV G
Sbjct: 235 EEGLRVAWELFE-EMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDG 293
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYT 387
YAK + AR +F +M ER+V+S NA++AGY QNG EAL F +L R+ + P + T
Sbjct: 294 YAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNAT 353
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
L+A A L G H ++ +G F E+ +G +LIDMY KCGS+++
Sbjct: 354 LLITLSAIAQLGHFDEGVALHCYIEDNG--FSLSEK----LGVALIDMYAKCGSIDNALS 407
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+FE + ++ WNA+I G A +G G A LF +M KPD +T IGVL AC+HAGL
Sbjct: 408 VFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGL 467
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG F M + H + P HY CMVD+LGRAG ++EAK +E MP++P+ V+W +LL
Sbjct: 468 VKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLL 527
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
+AC+ H N +GE VAK L+ ++ N YVLLSN+YA G W +V R+R +M++R + K
Sbjct: 528 SACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKK 587
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
PGCS IE+ G+V+ F V+DK HP +EIY +L L+ V Y
Sbjct: 588 IPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSALNSEVAY 632
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 218/461 (47%), Gaps = 60/461 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L +C R + + ++H + + + S++F+QN L+ +Y +CGCL AR++
Sbjct: 120 VDKFSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQL 179
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSE 134
FD+M ++ ++NS+I G +K G + A LF MP +++ SWNSM+SG+A R E
Sbjct: 180 FDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYA---RSEE 236
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L ++ E S+ S + C + + + K DV + ++D
Sbjct: 237 GLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPK----RDVVSWANMVD 292
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEV 253
Y K G + AR +FD M ER+++S N+++ Y QNG +AL F M++ + PD
Sbjct: 293 GYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNA 352
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL +SA A L F EG+ +H + LG AL+DMYAKCG ++ A VF+
Sbjct: 353 TLLITLSAIAQLGHFDEGVALHCYI-EDNGFSLSEKLGVALIDMYAKCGSIDNALSVFED 411
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ ++++ WNA+I G +G E A LF
Sbjct: 412 ID-------------------------------DKSIDHWNAIIGGLAIHGLGEVAFELF 440
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL------RFLSGEESDIF 427
+++ V P TF +LNAC H +VK GL R + E +
Sbjct: 441 MEMEKLFVKPDDITFIGVLNAC-----------NHAGLVKEGLMCFELMRRVHKVEPKLQ 489
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G VE+ + E M +E + V W ++ C
Sbjct: 490 HYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLSAC 530
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/578 (39%), Positives = 333/578 (57%), Gaps = 64/578 (11%)
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+S F H + L ++M F + ++ + L+ C F+ G +VHA + K+RY
Sbjct: 218 LSTFTTHIHLQQPL---LQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRY 274
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF-- 240
V++ + LI +Y KC + A VFD M ERN+VSW ++I+ Y Q G AS AL +F
Sbjct: 275 LPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFA 334
Query: 241 -VRMMASGI------------------EPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
V++ +G+ EP+E T A+V+++C S F G QIH+ +++
Sbjct: 335 DVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKL 394
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ + +G++L+DMYAK GK++E AR +
Sbjct: 395 -NYEDHVFVGSSLLDMYAKDGKIHE-------------------------------ARTV 422
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F + ER+VVS A+I+GY Q G +EEAL LFR L+ E + + T+ +L A + LA L
Sbjct: 423 FECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAAL 482
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
LG+Q H HV++ S S + + NSLIDMY KCG++ RIF+TM ER +SWN
Sbjct: 483 DLGKQVHNHVLR------SEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWN 536
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
AM+VG +++G G E L LF M + KPD VT++ VL CSH GL ++G F+ MS
Sbjct: 537 AMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSS 596
Query: 521 -EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+ + P +HY C+VDLLGR+G ++EA I+ MP +P A IWGSLL AC+VH N+ +G
Sbjct: 597 GKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIG 656
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E+ ++LLEIEP N+G YV+LSN+YA GRW +V +R LM K+ V K+PG S IE+
Sbjct: 657 EFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQV 716
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++ F D+ HP +EI + +K L+ K VGYVP+ S
Sbjct: 717 LHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLS 754
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 241/496 (48%), Gaps = 103/496 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L+ C+ ++ + +RVHA +IK+++ +F++ RLI +Y KC L A VFD+
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDE-- 303
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF-- 139
MPER+ SW +M+S ++Q S+AL F
Sbjct: 304 -----------------------------MPERNVVSWTAMISAYSQRGYASQALNLFFA 334
Query: 140 --------------VKMHSEN-----FALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+K+ + N +E++F + L++C S+ F +G Q+H+L+ K
Sbjct: 335 DVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKL 394
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Y V++GS+L+DMY K G++ AR VF+ + ER++VS ++I+ Y Q G +ALE+F
Sbjct: 395 NYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELF 454
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
R+ G++ + VT V++A + LAA G Q+H ++R E + + +VL N+L+DMY+K
Sbjct: 455 RRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE-IPSFVVLQNSLIDMYSK 513
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN-----A 355
CG L +R +FD M R V+S +M+ GY+K + +FT M E V + A
Sbjct: 514 CGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILA 573
Query: 356 LIAGYTQNGENEEALGL----------------------------------FRLLKRESV 381
+++G + G ++ L + F +K+
Sbjct: 574 VLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPF 633
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI--DMYMKC 439
PT +G+LL AC +++ +G A G + L E + GN +I ++Y
Sbjct: 634 EPTAAIWGSLLGACRVHSNVDIGEFA-------GQQLLEIEPGN--AGNYVILSNLYASA 684
Query: 440 GSVEDGCRIFETMVER 455
G ED + + M+++
Sbjct: 685 GRWEDVSSLRDLMLKK 700
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 354/681 (51%), Gaps = 76/681 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F+ L C R+ + R +HA I S + + N LID+Y KCG
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCG-------- 169
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
ID A +F S E D SWNS+++G+ + E L
Sbjct: 170 -----------------------RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEML 206
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG--SVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
VKM L+ Y+ GSAL AC S + G +H K DV +G+AL+D
Sbjct: 207 RLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLD 266
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ-----NGPASDALEVFVRMMASGIE 249
Y K G + A ++F M + N+V +N++I + Q + A++A+ +F M + G++
Sbjct: 267 TYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMK 326
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P E T +S++ AC+++ AF+ G QIHA++ + L++D +GNALV++Y+ G + +
Sbjct: 327 PSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGLK 385
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
F P + +VVSW +LI G+ QNG+ E
Sbjct: 386 CFHSTP-------------------------------KLDVVSWTSLIVGHVQNGQFEGG 414
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF L P +T +L+ACANLA ++ G Q H + +K G+ + +
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFT------IIQ 468
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
NS I MY KCG ++ F+ D VSW+ MI AQ+G EA+ LF+ M G
Sbjct: 469 NSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIA 528
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+H+T +GVL ACSH GLVEEG +YF M K+HG+ P H C+VDLLGRAG L EA++
Sbjct: 529 PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAES 588
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
I + D V+W SLL+AC+VH+ G+ VA++++E+EP + YVLL N+Y + G
Sbjct: 589 FIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGI 648
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
+R LM+ RGV K+PG SWIE+ V+ F+ D+ HP ++ IY+ L+ + E+K+
Sbjct: 649 QMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 708
Query: 670 VGYVPNASDDEAYEEQNGSNS 690
+ Y+ +A E ++ NS
Sbjct: 709 LDYIDEKLVSDASEPKHKDNS 729
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 270/560 (48%), Gaps = 70/560 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS + KL+ R+ S+ + H +IK+ F +F+ N L+ +Y KCG
Sbjct: 17 LDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCG-------- 68
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D A +LF MP+R+ SWNS++SG+ Q + E +
Sbjct: 69 -----------------------ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVM 105
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + + L +++F +ALS C ++D ++G +HAL++ S V + ++LIDMY
Sbjct: 106 NLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMY 165
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCGR+ AR VF+ E + VSWNSLI Y + G + L + V+M+ G+ + L
Sbjct: 166 CKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALG 225
Query: 257 SVVSACASLAAFKEGLQIHARLMRCE---KLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
S + AC S F ++ L C L D+V+G AL+D YAK G L +A +F
Sbjct: 226 SALKACGS--NFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKL 283
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP NVV +M++G+ + ++ EA+ LF
Sbjct: 284 MPDPNVVMYNAMIAGFLQMETMADEF--------------------------ANEAMYLF 317
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ + P+ +TF ++L AC+ + + G+Q H + K+ L +SD F+GN+L+
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNL------QSDEFIGNALV 371
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
++Y GS+EDG + F + + D VSW ++IVG QNG L LF ++L G KPD
Sbjct: 372 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 431
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T+ +L AC++ V+ G + + K G+ + + + G +D A +
Sbjct: 432 TISIMLSACANLAAVKSGEQIHAYAIKT-GIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490
Query: 554 MPMQPDAVIWGSLLAACKVH 573
PD V W ++++ H
Sbjct: 491 TK-NPDIVSWSVMISSNAQH 509
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/680 (33%), Positives = 352/680 (51%), Gaps = 95/680 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L +C V RR H IK + I++ N L+ +YAKC C
Sbjct: 140 LASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC------------ 187
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I DA + F +PE ++ S+ +M+ G A D+ +EA F
Sbjct: 188 -------------------IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRL 228
Query: 142 MHSENFALSEYSFGSALSACA--GSVDFKM------------GTQVHALLSKSRYSSDVY 187
M + S S L C+ G +F + G QVH L K + SD++
Sbjct: 229 MLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLH 288
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ ++L+DMY K G + A +F M E ++VSWN +I Y Q +S A+E RM G
Sbjct: 289 LNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHG 348
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
EPDE+T +++ AC + G Q+ + L N ++ Y++ EA
Sbjct: 349 FEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS-----PSLSSWNTILSGYSQNENHKEA 403
Query: 308 RCVFDRMPIRNV----------------------------VSE-----------TSMVSG 328
+F M R+V VS+ + ++
Sbjct: 404 VKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGM 463
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y+K V+ A+ +F ++ E ++V WN+++AG + N ++EA F+ ++ + + P+ +++
Sbjct: 464 YSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSY 523
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L+ CA L+ L GRQ H+ + + G +D FVG++LIDMY KCG V+ +
Sbjct: 524 ATVLSCCAKLSSLSQGRQVHSQIAREGYM------NDAFVGSALIDMYSKCGDVDAARWV 577
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ M+ ++ V+WN MI G AQNG G EA+ L++ M+ GEKPD +T + VL ACSH+GLV
Sbjct: 578 FDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLV 637
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ G K F+SM +EHG+ PL DHYTC++D LGRAG L EA+ LI+ MP + D +IW LL+
Sbjct: 638 DTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 697
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+C+V+ ++ L A++L ++P NS PYVLL+N+Y+ LGRW + VR+LM VVK
Sbjct: 698 SCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKD 757
Query: 629 PGCSWIEILGHVNVFMVKDK 648
PG SWIE + FMV D
Sbjct: 758 PGYSWIEHKNGMQAFMVDDN 777
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/599 (29%), Positives = 312/599 (52%), Gaps = 60/599 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
++ A LL +C+ K+ + +HA +++S+ + + F+ NRLI+ YAKC + +R++FD
Sbjct: 5 TTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFD 64
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+M ++++TWN+I+ K ++DA LFA MPER+ SWN+++S ++ +ALG
Sbjct: 65 QMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGV 124
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M E F + ++ S LSAC VD + G + H + K +++Y+G+AL+ MY K
Sbjct: 125 YYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAK 184
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C + A + F + E N VS+ +++ + ++A +F M+ + I D V+L+SV
Sbjct: 185 CRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSV 244
Query: 259 VSACASLAAFKEGLQ---------IHARLMRCEKLRN----DLVLGNALVDMYAKCGKLN 305
+ C+ + GL +H + + C +++ DL L N+L+DMYAK G ++
Sbjct: 245 LGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMD 304
Query: 306 EARCVFDRMPIRNVVSETSMVSGYA----------------------------------- 330
A +F MP +VVS M++GY
Sbjct: 305 SAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI 364
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K+ +++ R MF M ++ SWN +++GY+QN ++EA+ LFR ++ SV P T
Sbjct: 365 KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAI 424
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L++ A + L+ GRQ H K R +DI++ + LI MY KCG VE RIF+
Sbjct: 425 ILSSLAGMMLLEGGRQVHAVSQKAVFR------TDIYLASGLIGMYSKCGKVEMAKRIFD 478
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ E D V WN+M+ G + N EA FKKM G P + VL C+ + +
Sbjct: 479 RIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQ 538
Query: 511 GRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
GR+ S +++E + D + + ++D+ + G +D A+ + + M + + V W ++
Sbjct: 539 GRQVHSQIARE---GYMNDAFVGSALIDMYSKCGDVDAARWVFDMM-LGKNTVTWNEMI 593
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 181/335 (54%), Gaps = 21/335 (6%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+E LAS++ C A G IHA ++R +L +D L N L++ YAKC ++ +
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLR-SRLSDDTFLSNRLIEFYAKCNAIDAS 59
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +FD+MP R++ + +++ Y KAS ++ A ++F +M ERN+VSWN LI+ T+NG +
Sbjct: 60 RRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQ 119
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+ALG++ + RE PTH+T ++L+AC L D++ GR+ H +K GL +++I+
Sbjct: 120 KALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGL------DNNIY 173
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VGN+L+ MY KC + D + F + E + VS+ AM+ G A + EA LF+ ML
Sbjct: 174 VGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNR 233
Query: 488 EKPDHVTMIGVLCACSHAGLVEEG----RKYFSS---------MSKEHGLAPLKDHYTCM 534
D V++ VL CS G E G SS ++ +HG +
Sbjct: 234 IHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSL 293
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D+ + G +D A+ + MP + V W ++A
Sbjct: 294 LDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG 327
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 35/368 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L S + R+VHA K+ F ++I++ + LI +Y+KCG + A+++F
Sbjct: 418 DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIF 477
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+++ ++ WNS++ GL S NS+ D+ EA
Sbjct: 478 DRIAELDIVCWNSMMAGL----------------------SLNSL-------DK--EAFT 506
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F KM + S++S+ + LS CA G QVH+ +++ Y +D ++GSALIDMY
Sbjct: 507 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 566
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V AR VFD M +N V+WN +I Y QNG +A+ ++ M+ SG +PD +T +
Sbjct: 567 KCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVA 626
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC+ G++I + + + + ++D + G+L+EA + D+MP +
Sbjct: 627 VLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCK 686
Query: 318 --NVVSETSMVSG--YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
++ E + S YA S + A + +N + L Y+ G ++A +
Sbjct: 687 YDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVR 746
Query: 374 RLLKRESV 381
L+ V
Sbjct: 747 ELMSYNQV 754
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/599 (37%), Positives = 334/599 (55%), Gaps = 55/599 (9%)
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M ++ T+N +I+ G + A F PE+D SWN M++ + ++ R EA G F
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
SR DV +AL+ Y +
Sbjct: 61 ---------------------------------------NSRTEWDVISWNALMSGYVQW 81
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G++S AR +FD M R++VSWN +++ Y + G +A +F + D T +VV
Sbjct: 82 GKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF----DAAPVRDVFTWTAVV 137
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
S A + G+ AR + + V NA+V Y + ++EA+ +F+ MP RNV
Sbjct: 138 SGYA-----QNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 192
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S +M++GYA+A ++ A+ +F M +++ VSW A++A Y+Q G +EE L LF + R
Sbjct: 193 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 252
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
F +L+ CA++A L+ G Q H +++ +G FVGN+L+ MY KC
Sbjct: 253 GEWVNRSAFACVLSTCADIAALECGMQLHGRLIR------AGYGVGCFVGNALLAMYFKC 306
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ED FE M ERD VSWN MI G A++G+G EAL +F M KPD +T++GVL
Sbjct: 307 GNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVL 366
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLVE+G YF SM + G+ +HYTCM+DLLGRAG L EA L++ MP +PD
Sbjct: 367 AACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPD 426
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ +WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W + ++R +
Sbjct: 427 STMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVM 486
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
M +RGV K PG SWIE+ V+ F D HP ++IY L+ L MK+ GYV +A+D
Sbjct: 487 MEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYV-SATD 544
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 212/454 (46%), Gaps = 62/454 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L + +R+ V + R + S+ ++ N L+ Y + G + AR++F
Sbjct: 36 DAVSWNGMLAAYVRNGRVEEARG----LFNSRTEWDVISWNALMSGYVQWGKMSEARELF 91
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M ++V +WN +++G + G + +A RLF + P RD +W ++VSG+AQ+ EA
Sbjct: 92 DRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARR 151
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N S + A + +M + L + +V + ++ Y
Sbjct: 152 VFDAMPERNAV-------SWNAMVAAYIQRRMMDEAKELFNMMP-CRNVASWNTMLTGYA 203
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + A+ VFD M +++ VSW +++ Y Q G + + L++F+ M G + A
Sbjct: 204 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 263
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S CA +AA + G+Q+H RL+R V GNAL+ MY KCG + +AR F+ M R
Sbjct: 264 VLSTCADIAALECGMQLHGRLIRAGYGVGCFV-GNALLAMYFKCGNMEDARNAFEEMEER 322
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VVS +M++GYA+ +G +EAL +F +++
Sbjct: 323 DVVSWNTMIAGYAR-------------------------------HGFGKEALEIFDMMR 351
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------NS 431
S P T +L AC +H+ +V+ G+ + D V
Sbjct: 352 TTSTKPDDITLVGVLAAC-----------SHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 400
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
+ID+ + G + + + + M E D W A++
Sbjct: 401 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 434
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 23/286 (8%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+++ S FA +L +C ++ ++H R+I++ + F+ N L+ +Y KCG + AR
Sbjct: 255 WVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARN 314
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
F++M ++V +WN++I G + GF +A +F M + D + +++ +
Sbjct: 315 AFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGL 374
Query: 132 FSEALGYFVKMHSENFALS----EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ + YF MH +F ++ Y+ L AG + + H L+ + D
Sbjct: 375 VEKGISYFYSMH-HDFGVTAKPEHYTCMIDLLGRAGRL-----AEAHDLMKDMPFEPDST 428
Query: 188 MGSAL-----IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
M AL I + GR S A ++F+ + N + L Y +G DA ++ V
Sbjct: 429 MWGALLGASRIHRNPELGR-SAAEKIFE-LEPENAGMYVLLSNIYASSGKWRDARKMRVM 486
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
M G++ +V S + + F G +H + DL
Sbjct: 487 MEERGVK--KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDL 530
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 311/522 (59%), Gaps = 39/522 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S ++ACA S + + ++HA L SR++ D ++ ++LI MY KC V AR VFD MR
Sbjct: 54 YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMR 113
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+++VSW SLI Y QN +A+ + M+ +P+ T AS++ A + A G Q
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQ 173
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IHA ++C D+ +G+AL+DMYA+CGK++ A VFD
Sbjct: 174 IHALAVKC-GWHEDVYVGSALLDMYARCGKMDMATAVFD--------------------- 211
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
K+ +N VSWNALI+G+ + G+ E AL F + R TH+T+ ++ +
Sbjct: 212 ----------KLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
+ A L L+ G+ H HV+K S ++ FVGN+L+DMY K GS+ D ++F+ +
Sbjct: 262 SIARLGALEQGKWVHAHVIK------SRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVD 315
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+D V+WN+M+ AQ G G EA+ F++M G + +T + +L ACSH GLV+EG++
Sbjct: 316 NKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M KE+ L P DHY +V LLGRAG L+ A I MPM+P A +WG+LLAAC++H
Sbjct: 376 YFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N +G++ A + E++P +SGP VLL N+YA G+W RVR +M+ GV K+P CSW
Sbjct: 435 KNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSW 494
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+E+ V++F+ D HP +EIY + +++++++ GYVP+
Sbjct: 495 VEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPD 536
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 199/390 (51%), Gaps = 45/390 (11%)
Query: 10 IVGDLAFLDSSPFAK-------LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
++ DL LD+ A + +C +SK++ D R++HA + S+FA + F+ N LI
Sbjct: 35 VLRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIH 94
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KC + AR VFD+ M +D SW S+
Sbjct: 95 MYCKCRSVLDARNVFDQ-------------------------------MRRKDMVSWTSL 123
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++G+AQ+D EA+G M F + ++F S L A D G Q+HAL K +
Sbjct: 124 IAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGW 183
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
DVY+GSAL+DMY +CG++ A VFD + +N VSWN+LI+ + + G AL F
Sbjct: 184 HEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAE 243
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ +G E T +SV S+ A L A ++G +HA +++ + V GN L+DMYAK G
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFV-GNTLLDMYAKSG 302
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIA 358
+ +AR VFDR+ +++V+ SM++ +A+ K A F +M + N +++ ++
Sbjct: 303 SMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILT 362
Query: 359 GYTQNGENEEALGLFRLLKRESVCP--THY 386
+ G +E F ++K + P HY
Sbjct: 363 ACSHGGLVKEGKRYFEMMKEYDLEPEIDHY 392
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 154/326 (47%), Gaps = 42/326 (12%)
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
A + P S ++ACA ++ +IHA L + D L N+L+ MY KC +
Sbjct: 44 AGELAPTPRVYRSFITACAQSKNLEDARKIHAHL-GSSRFAGDAFLDNSLIHMYCKCRSV 102
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+AR VFD+M +++VS TS+ IAGY QN
Sbjct: 103 LDARNVFDQMRRKDMVSWTSL-------------------------------IAGYAQND 131
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
EA+GL + + P +TF +LL A AD GRQ H VK G
Sbjct: 132 MPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVK------CGWHE 185
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D++VG++L+DMY +CG ++ +F+ + ++ VSWNA+I G A+ G G AL F +ML
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEML 245
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK-EHGLAPLKDHYTCMVDLLGRAGC 543
G + H T V + + G +E+G+ + + K L + ++D+ ++G
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGN--TLLDMYAKSGS 303
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ +A+ + + + D V W S+L A
Sbjct: 304 MIDARKVFDRVD-NKDLVTWNSMLTA 328
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 32/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL + R++HA +K + ++++ + L+D+YA+CG + A VFDK+
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+KN +WN++I SGFA+ AL F +
Sbjct: 215 SKNGVSWNALI-------------------------------SGFARKGDGESALMTFAE 243
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + +++ S S+ A + G VHA + KSR ++G+ L+DMY K G
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGS 303
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR+VFD + +++V+WNS++T + Q G +A+ F M SG+ +++T +++A
Sbjct: 304 MIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTA 363
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ KEG + + +M+ L ++ +V + + G LN A +MP+
Sbjct: 364 CSHGGLVKEGKR-YFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPM 417
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
LL + PT + + + ACA +L+ R+ H H+ G +G D F+ NSLI
Sbjct: 41 LLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHL---GSSRFAG---DAFLDNSLIH 94
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KC SV D +F+ M +D VSW ++I G AQN EA+GL ML KP+ T
Sbjct: 95 MYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFT 154
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL----KDHY--TCMVDLLGRAGCLDEAK 548
+L A GR+ H LA +D Y + ++D+ R G +D A
Sbjct: 155 FASLLKAAGAYADSGTGRQI-------HALAVKCGWHEDVYVGSALLDMYARCGKMDMAT 207
Query: 549 TLIEAMPMQPDAVIWGSLLA 568
+ + + + + V W +L++
Sbjct: 208 AVFDKLDSK-NGVSWNALIS 226
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/537 (37%), Positives = 313/537 (58%), Gaps = 44/537 (8%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH + ++ + C + VH + + Y ++ + LI+MY K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +FD M +RN+VSW ++I+ Y + AL+ + M+ G+ P+ T +SV+ A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + Q+H +++ L +D+ + +AL+D Y+K G+ ++A VF+
Sbjct: 127 CDGLLNLR---QLHGSILKV-GLESDVFVRSALIDTYSKLGEQHDALNVFN--------- 173
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
M++G ++V WN++I G+ QN + +E L L++ +KR
Sbjct: 174 --EMITG--------------------DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADF 211
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T ++L AC LA L+LGRQ H HV+K+ + D+ + N+L+DMY KCGS
Sbjct: 212 VADQSTLTSVLRACTGLALLELGRQVHVHVLKY--------DQDLILNNALLDMYCKCGS 263
Query: 442 VEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ED +F M E+D +SW+ MI G AQNG+ +AL LF+ M G KP+++T++GVL
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLF 323
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSHAGLV +G YF SM + G+ P ++HY C++DLLGRAG LDEA LI M +PDA
Sbjct: 324 ACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDA 383
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
V W LL AC+VH+N+ L Y AK++L+++P+++G Y+LLSN+YA +W +V VR+ M
Sbjct: 384 VTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKM 443
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R RGV K PGCSWIE+ V+ F++ D HP +EI L L + + R+GYVP+ +
Sbjct: 444 RTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTN 500
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 213/457 (46%), Gaps = 85/457 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +++L+ CL +V R VH + + + + F+ N LI++Y
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMY------------- 61
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K+G +D+A LF MP+R+ SW +M+S ++ + +AL
Sbjct: 62 ------------------VKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALD 103
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + M E + Y++ S L AC G ++ + Q+H + K SDV++ SALID Y
Sbjct: 104 FLILMLREGVRPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLESDVFVRSALIDTYS 160
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G A VF+ M ++V WNS+I + QN + L ++ RM + D+ TL S
Sbjct: 161 KLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTS 220
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC LA + G Q+H +++ ++ DL+L NAL+DMY KCG L +A +F RM
Sbjct: 221 VLRACTGLALLELGRQVHVHVLKYDQ---DLILNNALLDMYCKCGSLEDANLLFTRM--- 274
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
M E++V+SW+ +IAG QNG + +AL LF +K
Sbjct: 275 ---------------------------MTEKDVISWSTMIAGLAQNGFSADALKLFEAMK 307
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG--EESDIFVGNS---- 431
+ P + T +L AC +H +V G + E I G
Sbjct: 308 SKGPKPNYITILGVLFAC-----------SHAGLVNDGWYYFQSMKEHFGIDPGREHYGC 356
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ID+ + G +++ ++ M E D V+W ++ C
Sbjct: 357 IIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGAC 393
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 366/670 (54%), Gaps = 76/670 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRR----VHARIIKSQFASE-IFIQNRLIDVYAKC 67
DL +++S +A LL + ++ + +R VHA +I++ I I N L+++YAKC
Sbjct: 344 DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKC 403
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
ID+A +F MP +D SWNS++SG
Sbjct: 404 NA-------------------------------IDNARSIFQLMPSKDTVSWNSIISGLD 432
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
++RF EA+ F M S++S S LS+CA +G Q+H K DV
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN-GPASDALEVFVRMMAS 246
+ +AL+ +Y + + ++VF M E + VSWNS I + A++ F+ MM +
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G +P+ VT +++SA +SL+ + G QIHA +++ + +D + N L+ Y KC ++ +
Sbjct: 553 GWKPNRVTFINILSAVSSLSLLELGRQIHALILK-HSVADDNAIENTLLAFYGKCEQMED 611
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
+F RM R R+ VSWNA+I+GY NG
Sbjct: 612 CEIIFSRMSER------------------------------RDEVSWNAMISGYIHNGIL 641
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+A+GL L+ ++ +T +L+ACA++A L+ G + H ++ L E+++
Sbjct: 642 HKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACL------EAEV 695
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
VG++L+DMY KCG ++ R FE M R+ SWN+MI G A++G+G +AL LF +M
Sbjct: 696 VVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQH 755
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G+ PDHVT +GVL ACSH GLV+EG ++F SM + + LAP +H++CMVDLLGRAG + +
Sbjct: 756 GQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKK 815
Query: 547 AKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMY 604
+ I+ MPM P+A+IW ++L AC RN LG AK L+E+EP N+ YVLLSNM+
Sbjct: 816 LEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMH 875
Query: 605 AELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
A G+W +V R MR V K+ GCSW+ + V+VF+ D+ HP ++IY LK +
Sbjct: 876 AAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIM 935
Query: 665 REMKRVGYVP 674
+M+ +GYVP
Sbjct: 936 NKMRDLGYVP 945
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 265/560 (47%), Gaps = 86/560 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ + DSC +V D ++H +I K+ S++F N L++++ + G L A+K+FD+M
Sbjct: 46 YNRYRDSC----TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMP 101
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
KN+ +W+ +++G + G D+A LF +
Sbjct: 102 QKNLVSWSCLVSGYAQNGMPDEACMLFRGII----------------------------- 132
Query: 142 MHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
S + Y+ GSAL AC G K+G ++H L+SKS Y+SD+ + + L+ MY C
Sbjct: 133 --SAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHC 190
Query: 200 -GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE----PDEVT 254
+ ARRVF+ ++ + SWNS+I+ Y + G A A ++F M E P+E T
Sbjct: 191 SASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYT 250
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEK--LRNDLVLGNALVDMYAKCGKLNEARCVFD 312
S+V+ SL L + L R EK DL +G+ALV +A+ G ++ A+ +F+
Sbjct: 251 FCSLVTVACSLVDCGLTL-LEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFE 309
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKM---LERNVVSWNALIAGYTQNGENEEA 369
+M RN V+ ++ G A+ + A +F +M +E N S+ L++ +T+ +E
Sbjct: 310 QMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEG 369
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
KR+ G++ H +++++ L + I +G
Sbjct: 370 -------KRK------------------------GQEVHAYLIRNALV-----DVWILIG 393
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+++Y KC ++++ IF+ M +D VSWN++I G N EA+ F M G
Sbjct: 394 NALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P ++I L +C+ G + G++ K GL ++ L C++E +
Sbjct: 454 PSKFSVISTLSSCASLGWIMLGQQIHGEGIK-CGLDLDVSVSNALLTLYAETDCMEEYQK 512
Query: 550 LIEAMPMQPDAVIWGSLLAA 569
+ MP + D V W S + A
Sbjct: 513 VFFLMP-EYDQVSWNSFIGA 531
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 333/599 (55%), Gaps = 39/599 (6%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYA-KCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
+++HA ++ S + + +++I YA + L A KVF+++ + F WN+++ GL
Sbjct: 327 VKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGL- 385
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
AQ D +A+ ++ K + +F
Sbjct: 386 ------------------------------AQSDAPKDAIVFYKKAQEKGMKPDNMTFPF 415
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L ACA + K G Q+H+ + K + D+++ ++LI +Y CG + CAR +FD M ++
Sbjct: 416 VLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKD 475
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNSLI Y Q + L +F M A ++ D+VT+ V+SAC L +
Sbjct: 476 VVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMA-DCMV 534
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
R + + D+ LGN L+D Y + G+L A VF +M +N V+ +M+ YAK ++
Sbjct: 535 RYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLV 594
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
SA+ +F ++ ++++SW+++I Y+Q ++L LFR ++R V P ++L+ACA
Sbjct: 595 SAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACA 654
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+L L LG+ H +V ++ ++ +D + NSLIDM+ KCG +++ ++F M E+D
Sbjct: 655 HLGALDLGKWIHDYVRRNNIK------TDTIMENSLIDMFAKCGCMQEALQVFTEMEEKD 708
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+SWN++I+G A NG+ EAL +F ML G +P+ VT +GVL AC++ LV+EG +F
Sbjct: 709 TLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFE 768
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M H L P HY C+V +L RAG L++AK I MP+ PD V+W LL ACK H N+
Sbjct: 769 RMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNV 828
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E KKL E++PSNSG Y+LLSN+YA RW + + VR+ M V K P CS ++
Sbjct: 829 AVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 199/322 (61%), Gaps = 7/322 (2%)
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP++NVVS +++G+A ++ ARL+F +M RNVVSW LI GYT+ EA+ LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R + + P+ T ++ A +NL + +G H + VK G+ SD VGNSLI
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIM------SDARVGNSLI 114
Query: 434 DMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
D+Y K GSV++ ++F+ M++R + VSW ++I G A +G EAL LF +M G +P+
Sbjct: 115 DLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNR 174
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T + V+ ACSH GLVE+G +F SM E+ + P H+ C++D+LGRAG L EA+ +IE
Sbjct: 175 ITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIE 234
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
+P++ + ++W LL C + + +G+ K + ++E + G + +LSN+ ELGR+ +
Sbjct: 235 GLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSD 294
Query: 613 VVRVRKLMRKRGVVKQPGCSWI 634
+ RKL+ +R +VK PG + +
Sbjct: 295 AEQARKLLDERKIVKVPGLALV 316
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 217/486 (44%), Gaps = 100/486 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C ++ + + ++H+ +IK F +IF+ N LI +YA CG L AR +F
Sbjct: 409 DNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIF 468
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M K+V SWNS++ G++Q +RF E L
Sbjct: 469 DEMLVKDV-------------------------------VSWNSLIGGYSQRNRFKEVLA 497
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M +E + + +SAC D+ M + + ++ DVY+G+ LID Y
Sbjct: 498 LFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYC 557
Query: 198 KCGRVSCARRVFDGMRERN-------------------------------IVSWNSLITC 226
+ G++ A +VF M+++N ++SW+S+I
Sbjct: 558 RIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICA 617
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q SD+LE+F +M + ++PD V +ASV+SACA L A G IH + R ++
Sbjct: 618 YSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRR-NNIKT 676
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D ++ N+L+DM+AKCG + EA VF T+M
Sbjct: 677 DTIMENSLIDMFAKCGCMQEALQVF-------------------------------TEME 705
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E++ +SWN++I G NG +EAL +F + E P TF +L ACAN +Q G
Sbjct: 706 EKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLD 765
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
++ + E + ++ + + G +E M + D V W ++
Sbjct: 766 HFER-----MKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLG 820
Query: 466 GCAQNG 471
C +G
Sbjct: 821 ACKTHG 826
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 19/495 (3%)
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M KNV +WN +ITG WG I+ A LF MP R+ SW ++ G+ + ++EA+ F
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + + SE + + + A + MG +H K SD +G++LID+Y K
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 200 GRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G V + +VFD M + RN+VSW S+I+ + +G + +ALE+F M +GI P+ +T SV
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSV 180
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR- 317
++AC+ ++GL ++ + ++ ++DM + G+L EA + + +P+
Sbjct: 181 INACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV 240
Query: 318 NVVSETSMV---SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
NV+ ++ S Y + K A M + + + + L + G +A +
Sbjct: 241 NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARK 300
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
LL + G L + ++ ++ H H+V GL S + +L
Sbjct: 301 LLDERKIVKVP---GLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYAL-- 355
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
+ + ++FE + WN ++ G AQ+ +A+ +KK G KPD++T
Sbjct: 356 ---QQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMT 412
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT--CMVDLLGRAGCLDEAKTLIE 552
VL AC+ +EG + S + K L L D + ++ L G L A+++ +
Sbjct: 413 FPFVLKACAKTYAPKEGEQMHSHVIK---LGFLLDIFVSNSLIHLYAACGDLVCARSIFD 469
Query: 553 AMPMQPDAVIWGSLL 567
M ++ D V W SL+
Sbjct: 470 EMLVK-DVVSWNSLI 483
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 242/567 (42%), Gaps = 81/567 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM-SNKNVFTWNSIITGLLKWG 99
+H +K S+ + N LID+YAK G + + KVFD+M +N+ +W SII+G
Sbjct: 94 LHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISG----- 148
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
FA H EAL F +M + +F S ++
Sbjct: 149 --------------------------FAMHGLSVEALELFAEMRRAGIRPNRITFLSVIN 182
Query: 160 ACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNI 217
AC+ + G +++ + ++ +IDM G+ GR+ A ++ +G+ E N+
Sbjct: 183 ACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNV 242
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+ W L+ C + G ++M++ A + + L F + Q +
Sbjct: 243 IVWRILLGCCSKYGEVEMGKRA-IKMISDLERESGGDFAVLSNVLNELGRFSDAEQAR-K 300
Query: 278 LMRCEKLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA-KA 332
L+ K+ LV+ + V M A KL+ V + +S+ ++ YA +
Sbjct: 301 LLDERKIVKVPGLALVVTRSFVMMEA-VKKLHAHLVVSGLHNCQYAMSK--VIRSYALQQ 357
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
S + A +F ++ WN L+ G Q+ ++A+ ++ + + + P + TF +L
Sbjct: 358 SDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVL 417
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
ACA + G Q H+HV+K G DIFV NSLI +Y CG + IF+ M
Sbjct: 418 KACAKTYAPKEGEQMHSHVIKLGFLL------DIFVSNSLIHLYAACGDLVCARSIFDEM 471
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG------ 506
+ +D VSWN++I G +Q E L LF+ M + D VTM+ V+ AC+H G
Sbjct: 472 LVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMAD 531
Query: 507 --------------------LVEEGRKYFSSMSKEHGLAPLKDHYT----CMVDLLGRAG 542
L++ + S E + +KD T M+ + G
Sbjct: 532 CMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGG 591
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAA 569
L AK + + +P D + W S++ A
Sbjct: 592 NLVSAKKIFDQIP-NKDLISWSSMICA 617
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 305/525 (58%), Gaps = 44/525 (8%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
++ + C+ + G +VH + Y +++ + L++MY K + A +FD M
Sbjct: 57 TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
ERN+VSW ++I+ Y N AL+ + M G+ P+ T +SV+ AC L +
Sbjct: 117 PERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR--- 172
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+H +++ L +D+ + +AL+D+Y+K L+ A V
Sbjct: 173 QLHCGIIKT-GLESDVFVRSALIDVYSKWSDLDNALGV---------------------- 209
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
F +M R++V WN++I G+ QN + EAL LF+ +KR T ++L
Sbjct: 210 ---------FDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVL 260
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC LA L+LGRQ H HV+K + D+ + N+LIDMY KCGS+ED F M
Sbjct: 261 RACTGLALLELGRQVHVHVLKF--------DQDLILNNALIDMYCKCGSLEDANSAFSRM 312
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
VE+D +SW+ M+ G AQNGY +AL LF+ M G +P+++T++GVL ACSHAGLVE+G
Sbjct: 313 VEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGW 372
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF SM K G+ P ++HY C++DLLGRAG LDEA LI M +PD+V W +LL AC+V
Sbjct: 373 YYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRV 432
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
HRN+ L Y AKK++E+EP ++G Y+LLSN+YA RW +V VRK M RG+ K PGCS
Sbjct: 433 HRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCS 492
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
WIE+ ++VF++ D HP +EI L L + VGYVP+ +
Sbjct: 493 WIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTN 537
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 213/453 (47%), Gaps = 75/453 (16%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D+ +++L+ C +V + +RVH I + ++F+ N L+++Y
Sbjct: 52 FADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMY----------- 100
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+K+ +++A LF MPER+ SW +M+S ++ +A
Sbjct: 101 --------------------VKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKA 139
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L + M E + +++ S L AC G + + Q+H + K+ SDV++ SALID+
Sbjct: 140 LKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLESDVFVRSALIDV 196
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K + A VFD M R++V WNS+I + QN ++AL +F RM +G D+ TL
Sbjct: 197 YSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATL 256
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
SV+ AC LA + G Q+H ++ K DL+L NAL+DMY KCG L +A F RM
Sbjct: 257 TSVLRACTGLALLELGRQVHVHVL---KFDQDLILNNALIDMYCKCGSLEDANSAFSRMV 313
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++V+S ++MV+G A QNG + +AL LF
Sbjct: 314 EKDVISWSTMVAGLA-------------------------------QNGYSRQALELFES 342
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+K P + T +L AC++ ++ G + K L G + LID+
Sbjct: 343 MKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKK-----LFGVDPGREHYGCLIDL 397
Query: 436 YMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G +++ ++ M E D V+W ++ C
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGAC 430
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 319/538 (59%), Gaps = 45/538 (8%)
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+ + +A++AC G QVHA + +RY V++G+ L+ MY +CG + AR V D
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ER++VSW ++I+ Y Q +AL++F++M+ +G P+E TLA+V+++C+ + +G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+H+ L++ + + +G++L+DMYAK
Sbjct: 131 KQVHSLLVKT-NFESHMFVGSSLLDMYAK------------------------------- 158
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ +++ AR +F + ER+VVS A+I+GY Q G +EEAL LFR L E + H TF L
Sbjct: 159 SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL 218
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ A + LA L G+Q H +++ L F + + NSLIDMY KCG + R+F+
Sbjct: 219 VTALSGLASLDYGKQVHALILRKELPFF------VALQNSLIDMYSKCGKLLYSRRVFDN 272
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ER VSWNAM++G ++G G E + LFK L KPD VT++ VL CSH GLV+EG
Sbjct: 273 MLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEG 331
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
F ++ KE HY C++DLLGR+G L++A LIE MP + IWGSLL AC+
Sbjct: 332 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACR 391
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH N+ +GE VA+KLLE+EP N+G YV+LSN+YA G W +V +VRKLM ++ V K+PG
Sbjct: 392 VHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQ 451
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
SWI + ++ F ++ HP K+I +K + ++K G+VP+ S DDE E
Sbjct: 452 SWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKE 509
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 227/445 (51%), Gaps = 74/445 (16%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ +C+ +++ + R+VHAR+I +++ +F+ RL+ +Y +CG L
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGAL--------------- 61
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
DDA + MPER SW +M+SG++Q +R EAL F+KM
Sbjct: 62 ----------------DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 105
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+EY+ + L++C+G G QVH+LL K+ + S +++GS+L+DMY K + A
Sbjct: 106 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 165
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
RRVFD + ER++VS ++I+ Y Q G +AL++F ++ + G++ + VT ++V+A + L
Sbjct: 166 RRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGL 225
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A+ G Q+HA ++R E L + L N+L+DMY+KCGKL +R VFD M R+VV
Sbjct: 226 ASLDYGKQVHALILRKE-LPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVV----- 279
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
SWNA++ GY ++G E + LF+ L +E V P
Sbjct: 280 --------------------------SWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 312
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS--LIDMYMKCGSVE 443
T +L+ C++ + G VVK + + + G+ +ID+ + G +E
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKE-------QSALLHTGHYGCIIDLLGRSGRLE 365
Query: 444 DGCRIFETM-VERDWVSWNAMIVGC 467
+ E M E W +++ C
Sbjct: 366 KALNLIENMPFESTPSIWGSLLGAC 390
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 171/327 (52%), Gaps = 33/327 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L SC +S+ ++VH+ ++K+ F S +F+ + L+D+YAK
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK--------------- 158
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++N I +A R+F ++PERD S +++SG+AQ EAL F +
Sbjct: 159 SEN----------------IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 202
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
++SE + +F + ++A +G G QVHAL+ + V + ++LIDMY KCG+
Sbjct: 203 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 262
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RRVFD M ER++VSWN+++ Y ++G + + +F + + ++PD VTL +V+S
Sbjct: 263 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSG 321
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ EGL I +++ + ++D+ + G+L +A + + MP + S
Sbjct: 322 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381
Query: 322 ETSMVSGYAKA-SSVKSARLMFTKMLE 347
+ G + ++V L+ K+LE
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLE 408
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/674 (35%), Positives = 367/674 (54%), Gaps = 79/674 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRR----VHARIIKSQFA-SEIFIQNRLIDVYAKC 67
DL ++S + LL + + + RR VHA +I++ +++ I N L+++YAK
Sbjct: 849 DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 908
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G I DA +F M E+D SWNS++SG
Sbjct: 909 GA-------------------------------IADACSVFELMVEKDSVSWNSLISGLD 937
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q++ +A F++M S ++ S LS+CA +G Q+H K +DV
Sbjct: 938 QNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 997
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY-EQNGPASDALEVFVRMMAS 246
+ +AL+ +Y + G + +VF M E + VSWNS+I + S A++ F+ MM
Sbjct: 998 VSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRG 1057
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLN 305
G VT +++SA +SL+ + QIHA +++ C L +D +GNAL+ Y KCG++N
Sbjct: 1058 GWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYC--LSDDTAIGNALLSCYGKCGEMN 1115
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
E +F RM SET R+ VSWN++I+GY N
Sbjct: 1116 ECEKIFARM------SET------------------------RDEVSWNSMISGYIHNEL 1145
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+A+ L + ++ +TF +L+ACA++A L+ G + H ++ + ESD
Sbjct: 1146 LHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACM------ESD 1199
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ VG++L+DMY KCG ++ R FE M R+ SWN+MI G A++G+G +AL LF +M+L
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 1259
Query: 486 CGEKPDHVT-MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
G+ PDHV ++GVL ACSH G VEEG ++F SMS+ + L+P +H++CMVDLLGRAG L
Sbjct: 1260 DGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 1319
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
DE I +MPM+P+ +IW ++L AC RN LG A+ LLE+EP N+ YVLL+N
Sbjct: 1320 DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 1379
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MYA +W +V + R M++ V K+ GCSW+ + V+VF+ DK HP IY L+
Sbjct: 1380 MYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRE 1439
Query: 663 LTREMKRVGYVPNA 676
L R+M+ GY+P
Sbjct: 1440 LNRKMRDAGYIPQT 1453
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 276/567 (48%), Gaps = 84/567 (14%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F S F L++ S + R +H + IK F +F+ N LI++Y + G L A+K
Sbjct: 541 FSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 600
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD+MSN+N+ TW +I SG+ Q+ + EA
Sbjct: 601 LFDEMSNRNLVTWACLI-------------------------------SGYTQNGKPDEA 629
Query: 136 LGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
F M F + Y+FGSAL AC +G K+G Q+H L+SK+RY SDV + + LI
Sbjct: 630 CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 689
Query: 194 DMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI---- 248
MYG C + AR VFD + RN +SWNS+I+ Y + G A ++F M G+
Sbjct: 690 SMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSF 749
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLM-RCEK--LRNDLVLGNALVDMYAKCGKLN 305
+P+E T S+++A S F GL + +++ R EK DL +G+ALV +A+ G +
Sbjct: 750 KPNEYTFGSLITAACSSVDF--GLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTD 807
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER---NVVSWNALIAGYTQ 362
+A+ +F++M +RNVVS ++ G K ++A +F +M + N S+ L++ +++
Sbjct: 808 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSE 867
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
EE +R+ GR+ H HV++ GL
Sbjct: 868 FSVLEEG-------RRK------------------------GREVHAHVIRTGL-----N 891
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
++ + +GN L++MY K G++ D C +FE MVE+D VSWN++I G QN +A F +
Sbjct: 892 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M G P + T+I L +C+ G + G + K GL ++ L G
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK-LGLDTDVSVSNALLALYAETG 1010
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAA 569
C E + MP + D V W S++ A
Sbjct: 1011 CFTECLKVFSLMP-EYDQVSWNSVIGA 1036
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 154/545 (28%), Positives = 261/545 (47%), Gaps = 73/545 (13%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKC-GCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++H I K+++ S++ + N LI +Y C AR VFD++ +N +WNSII+ +
Sbjct: 668 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRR 727
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G A LF+SM + E LG+ +F +EY+FGS +
Sbjct: 728 GDXVSAYDLFSSMQK--------------------EGLGF-------SFKPNEYTFGSLI 760
Query: 159 SACAGSVDFKMGT--QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
+A SVDF + Q+ A + KS + D+Y+GSAL+ + + G A+ +F+ M RN
Sbjct: 761 TAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRN 820
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDE-VTLASVVSACASLA-AFKEGLQ 273
+VS N L+ + A +VF M GI D V L S S + L ++G +
Sbjct: 821 VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGRE 880
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+HA ++R N + +GN LV+MYAK G + +A VF+ M ++ VS
Sbjct: 881 VHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS------------ 928
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
WN+LI+G QN +E+A F ++R P+++T + L+
Sbjct: 929 -------------------WNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLS 969
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
+CA+L + LG Q H +K GL ++D+ V N+L+ +Y + G + ++F M
Sbjct: 970 SCASLGWIMLGEQIHCDGLKLGL------DTDVSVSNALLALYAETGCFTECLKVFSLMP 1023
Query: 454 ERDWVSWNAMIVGCAQNGYG-TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
E D VSWN++I + + ++A+ F +M+ G VT I +L A S L E
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSH 1083
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ + + K + L+ ++ G+ G ++E + + M D V W S+++ +
Sbjct: 1084 QIHALVLK-YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG-YI 1141
Query: 573 HRNIM 577
H ++
Sbjct: 1142 HNELL 1146
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 27/306 (8%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ N+ ++++ Y + + SA+ +F +M RN+V+W LI+GYTQNG+ +EA FR
Sbjct: 576 VGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRD 635
Query: 376 LKRESVCPTHYTFGNLLNAC--ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ R P HY FG+ L AC + + +LG Q HGL + SD+ V N LI
Sbjct: 636 MVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI------HGLISKTRYGSDVVVCNVLI 689
Query: 434 DMYMKC-GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM----LLCGE 488
MY C S D +F+ + R+ +SWN++I ++ G A LF M L
Sbjct: 690 SMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSF 749
Query: 489 KPDHVTMIGVL-CACSHAGLVEEGRKYFSSM-SKEHGLAPLKDHY--TCMVDLLGRAGCL 544
KP+ T ++ ACS V+ G M ++ L+D Y + +V R G
Sbjct: 750 KPNEYTFGSLITAACSS---VDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLT 806
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP---SNSGPYVLLS 601
D+AK + E M ++ + G ++ K + GE AK E++ NS YV+L
Sbjct: 807 DDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ----GEAAAKVFHEMKDLVGINSDSYVVLL 862
Query: 602 NMYAEL 607
+ ++E
Sbjct: 863 SAFSEF 868
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/653 (34%), Positives = 345/653 (52%), Gaps = 68/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S ++VH IK+ +F+ N +D+Y+K
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK----------- 473
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+G I DA LF+ +P +D SWN++ G AQ+ EA+
Sbjct: 474 --------------------YGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M + SF +A++AC+ + G Q+H L K S+ +GS+LID+Y
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V +R++F + +IV N+LI + QN +A+++F +++ G++P VT +S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S C+ G Q+H ++ L +D +LG +L +Y K L +A + MP
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD- 692
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+N+ W A+I+GY QNG + +L F ++
Sbjct: 693 -----------------------------HKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+V TF ++L AC+++ G++ H + K G F S E + ++LIDMY
Sbjct: 724 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG--FGSYETAT----SALIDMYS 777
Query: 438 KCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V F+ + + D + WN+MIVG A+NGY EAL LF+KM KPD VT +
Sbjct: 778 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC+H+GL+ EGR +F SM K +GL P DHY C +DLLGR G L EA+ I+ +P
Sbjct: 838 GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD V+W + LAAC++H++ G+ A+KL+E+EP S YVLLS+++A G W E
Sbjct: 898 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R+ MR++GV K PGCSWI + ++F+V+DK HP N IY +L LT MK+
Sbjct: 958 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1010
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 282/593 (47%), Gaps = 87/593 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C R ++ R+VH ++KS F+S +F + L+D+YAKCG + AR+VF
Sbjct: 157 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 216
Query: 78 DKMSNKNVFTWNS-----------------------------------IITGLLKWGFID 102
D ++ + W+S II+ L G +D
Sbjct: 217 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLD 276
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A+ L MP +WN+++SG AQ LG + M S + +F S LSA A
Sbjct: 277 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 336
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
F G Q+HA ++V++GS+LI++Y KCG S A+ VFD E+NIV WN+
Sbjct: 337 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 396
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
++T + QN +A+ +F MM ++ DE T S++ AC L++F G Q+H C
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVH-----CV 451
Query: 283 KLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++N L + NA +DMY+K G + +A+ +F +P
Sbjct: 452 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY---------------------- 489
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
++ +SWNAL G QN E EEA+ + + ++ + P +F +NAC+N+
Sbjct: 490 ---------KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ G+Q H +K+G+ S+ VG+SLID+Y K G VE +IF + V
Sbjct: 541 RATETGKQIHCLAIKYGIC------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIV 594
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
NA+I G QN EA+ LF+++L G KP VT +L CS + G++
Sbjct: 595 PINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYT 654
Query: 519 SKEHGLAPLKDHYTCMVDLLG---RAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K L D V L G ++ L++A L+ MP + W ++++
Sbjct: 655 LKS---GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 56/496 (11%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGT 171
ER + +S++S A+ + LG F + + ++ LSAC+ G
Sbjct: 119 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 178
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
QVH + KS +SS V+ +AL+DMY KCG V ARRVFDG+ + + W+S+I CY + G
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+AL +F RM G PD+VTL +++S AS G HA + + V
Sbjct: 239 CYQEALALFSRMDKMGSAPDQVTLVTIISTLAS-----SGRLDHATALLKKMPTPSTVAW 293
Query: 292 NALVDMYAKCGKLNEARCVFDRM------PIR---------------------------- 317
NA++ +A+ G ++ M P R
Sbjct: 294 NAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM 353
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
NV +S+++ YAK A+ +F E+N+V WNA++ G+ QN EEA+ +
Sbjct: 354 HGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRM 413
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R ++ +TF ++L AC L+ LG+Q H +K+ + + +FV N+
Sbjct: 414 FQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM------DISLFVANAT 467
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY K G++ D +F + +D +SWNA+ VG AQN EA+ + K+M L G PD
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 527
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL-- 550
V+ + ACS+ E G++ ++ ++G+ + ++DL + G ++ ++ +
Sbjct: 528 VSFSTAINACSNIRATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586
Query: 551 -IEAMPMQP-DAVIWG 564
++A + P +A+I G
Sbjct: 587 QVDASSIVPINALIAG 602
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 209/428 (48%), Gaps = 71/428 (16%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF--VRMMA 245
+G +L+++Y K GRV A ER + +SL++C+ ++G D L F +R A
Sbjct: 93 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 152
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G PD+ LA V+SAC+ + G Q+H +++ + + ALVDMYAKCG +
Sbjct: 153 GG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVK-SGFSSSVFCEAALVDMYAKCGDVP 210
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT---------------------- 343
AR VFD + + + +SM++ Y + + A +F+
Sbjct: 211 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 270
Query: 344 -------------KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
KM + V+WNA+I+G+ Q+G LGL++ ++ + PT TF +
Sbjct: 271 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 330
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+A AN+ G+Q H V HGL ++++FVG+SLI++Y KCG D +F+
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGL------DANVFVGSSLINLYAKCGCPSDAKNVFD 384
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
E++ V WNAM+ G QN EA+ +F+ M+ + D T + +L AC+
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT------- 437
Query: 511 GRKYFSS--MSKEHGLAPLKDHYTCM----------VDLLGRAGCLDEAKTLIEAMPMQP 558
Y SS + K+ +K+ CM +D+ + G + +AK L +P +
Sbjct: 438 ---YLSSFYLGKQVHCVTIKN---CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK- 490
Query: 559 DAVIWGSL 566
D++ W +L
Sbjct: 491 DSISWNAL 498
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 34/313 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAK 66
+Q++ D S F+ +L C S + + ++VH +KS + + L +Y K
Sbjct: 617 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLK 676
Query: 67 CGCLYGARKVFDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
L A K+ +M + KN+F W +II+G + G+ D +S+VS
Sbjct: 677 SKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD-----------------HSLVS- 718
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
F +M N E +F S L AC+ F G ++H L++KS + S
Sbjct: 719 -------------FWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMM 244
SALIDMY KCG V + F ++ + +I+ WNS+I + +NG A +AL +F +M
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
I+PDEVT V+ AC EG + + L L +D+ + G L
Sbjct: 826 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHL 885
Query: 305 NEARCVFDRMPIR 317
EA+ D++P R
Sbjct: 886 QEAQEAIDQLPFR 898
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R + T HG G +G+SL+++Y K G V ER + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 465 VGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
A++G + LG F+ + G +PD + VL ACS G++ GR+ + K G
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 188
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ +VD+ + G + A+ + + + PD + W S++A
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSSMIA 232
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 353/658 (53%), Gaps = 87/658 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ ++ LR++ + + R V ++ ++++ +I YA+ A ++F +M
Sbjct: 14 YQSMITDHLRNQRIDEARTVFDKVS----FPDVYLYTMMITGYARNYRFDHALQLFYEMP 69
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V +WNS+I G + A +LF MPER SW +M++GF Q + A G F K
Sbjct: 70 VKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYK 129
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC-- 199
M F+ D+ +++I YG C
Sbjct: 130 M-----------------------PFR----------------DIAAWNSMI--YGYCCN 148
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE--PDEVTLAS 257
GRV R+F M RN++SW S+I +Q+G + +AL +F +MM G+E P T
Sbjct: 149 GRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCC 208
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ACA+ +A +G+QIHA + + D + AL+ YA C ++ ++ VF
Sbjct: 209 VITACANASALYQGVQIHAHVFKL-GYSFDAYISAALITFYANCKQMEDSLRVFH----- 262
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
L NVV W AL+ GY N ++E+AL +F +
Sbjct: 263 --------------------------GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 296
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE V P +F + LN+C L L GR+ HT VK GL E+D+FVGNSLI MY
Sbjct: 297 REGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGL------ETDVFVGNSLIVMYY 350
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG++ DG IF+ + +++ VSWN++IVGCAQ+G G AL F +M+ +PD +T G
Sbjct: 351 RCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTG 410
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACSH+G+ ++GR F S+ DHY CMVD+LGR+G L+EA+ LI MP++
Sbjct: 411 LLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 470
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
++++W LL+AC +H + + E AK ++++EP S YVLLSN+YA RW +V R+R
Sbjct: 471 ANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIR 530
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ M++RG+ KQPG SWI I G N F+ D+ HP + IY L+ L ++K +GYVP+
Sbjct: 531 REMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPD 588
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 175/388 (45%), Gaps = 50/388 (12%)
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
S+ S+IT + +N +A VF ++ PD +++ A F LQ+
Sbjct: 13 SYQSMITDHLRNQRIDEARTVFDKVSF----PDVYLYTMMITGYARNYRFDHALQLFY-- 66
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
E D+V N+++ C L AR +FD MP R+VVS T+M++G+ + ++ A
Sbjct: 67 ---EMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVA 123
Query: 339 RLMFTKMLERNVVSWNALIAGY-------------------------------TQNGENE 367
+F KM R++ +WN++I GY Q+G +E
Sbjct: 124 EGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSE 183
Query: 368 EALGLFRLLK--RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EALGLFR + V PT T+ ++ ACAN + L G Q H HV K G F D
Sbjct: 184 EALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF------D 237
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
++ +LI Y C +ED R+F + + V W A++ G N +AL +F +M+
Sbjct: 238 AYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMR 297
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G P+ + L +C ++ GR+ ++ K GL ++ + R G L+
Sbjct: 298 EGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKL-GLETDVFVGNSLIVMYYRCGNLN 356
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + + + + + V W S++ C H
Sbjct: 357 DGVVIFKRIS-KKNIVSWNSVIVGCAQH 383
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
SS + ++ +C + ++ ++HA + K ++ + +I LI YA C + + +VF
Sbjct: 203 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 262
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ NV W +++T G+ + + +AL
Sbjct: 263 GKLHMNVVIWTALVT-------------------------------GYGLNCKHEDALKV 291
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M E ++ SF SAL++C G G ++H K +DV++G++LI MY +
Sbjct: 292 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 351
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG ++ +F + ++NIVSWNS+I Q+G AL F +M+ S +EPDE+T +
Sbjct: 352 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 411
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SAC+ ++G + + L +VD+ + GKL EA + MP++
Sbjct: 412 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 470
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F L+SC +++ R +H +K +++F+ N LI +Y +CG L +F
Sbjct: 303 NQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 362
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++S KN+ +WNS+I G AQH AL
Sbjct: 363 KRISKKNIVSWNSVIVGC-------------------------------AQHGCGMWALA 391
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDM 195
+F +M E +F LSAC+ S + G + S+++ S++V + + ++D+
Sbjct: 392 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENK-SAEVKLDHYACMVDI 450
Query: 196 YGKCGRVSCARRVFDGMRER-NIVSWNSLIT 225
G+ G++ A + M + N + W L++
Sbjct: 451 LGRSGKLEEAEELIRNMPVKANSMVWLVLLS 481
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 329/575 (57%), Gaps = 49/575 (8%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHD-RFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
RL ++ P N + HD R EAL + M + + + L+ C
Sbjct: 20 RLLSTFPSNSHHVLNIHI-----HDTRLREAL---LHMALRGLDTNFQDYNTVLNECLRK 71
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
+ G +VHA + K+ Y VY+ + LI Y KC + AR VFD M ERN+VSW ++I
Sbjct: 72 RAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMI 131
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
+ Y Q G AS AL +FV+M+ SG EP+E T A+V+++C + F G QIH+ +++
Sbjct: 132 SAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKL-NY 190
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ +G++L+DMYAK GK++E AR +F
Sbjct: 191 EAHVYVGSSLLDMYAKDGKIHE-------------------------------ARGIFQC 219
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+ ER+VVS A+I+GY Q G +EEAL LFR L+RE + + T+ ++L A + LA L G
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHG 279
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+Q H H+++ S S + + NSLIDMY KCG++ RIF+T+ ER +SWNAM+
Sbjct: 280 KQVHNHLLR------SEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAML 333
Query: 465 VGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSM-SKEH 522
VG +++G G E L LF M+ + KPD VT++ VL CSH GL ++G F M S +
Sbjct: 334 VGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKI 393
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ P HY C+VD+LGRAG ++ A ++ MP +P A IWG LL AC VH N+ +GE+V
Sbjct: 394 SVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFV 453
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
+LL+IEP N+G YV+LSN+YA GRW +V +R LM K+ V K+PG SWIE+ ++
Sbjct: 454 GHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHT 513
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
F D HP +E+ ++ L+ K GYVP+ S
Sbjct: 514 FHASDCSHPRREEVSAKVQELSARFKEAGYVPDLS 548
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 204/366 (55%), Gaps = 40/366 (10%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D F D + +L+ CLR +++ + +RVHA +IK+ + ++++ RLI Y KC L
Sbjct: 55 DTNFQD---YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRD 111
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR VFD MPER+ SW +M+S ++Q
Sbjct: 112 ARHVFD-------------------------------VMPERNVVSWTAMISAYSQRGYA 140
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
S+AL FV+M +E++F + L++C GS F +G Q+H+ + K Y + VY+GS+L
Sbjct: 141 SQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSL 200
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+DMY K G++ AR +F + ER++VS ++I+ Y Q G +ALE+F R+ G++ +
Sbjct: 201 LDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNY 260
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
VT SV++A + LAA G Q+H L+R E + + +VL N+L+DMY+KCG L AR +FD
Sbjct: 261 VTYTSVLTALSGLAALDHGKQVHNHLLRSE-VPSYVVLQNSLIDMYSKCGNLTYARRIFD 319
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN-----ALIAGYTQNGENE 367
+ R V+S +M+ GY+K + +F M++ N V + A+++G + G +
Sbjct: 320 TLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLED 379
Query: 368 EALGLF 373
+ + +F
Sbjct: 380 KGMDIF 385
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 33/297 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L SC+ S R++H+ IIK + + +++ + L+D+YAK G ++ AR +
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGI----- 216
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F +PERD S +++SG+AQ EAL F +
Sbjct: 217 --------------------------FQCLPERDVVSCTAIISGYAQLGLDEEALELFRR 250
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ E + ++ S L+A +G G QVH L +S S V + ++LIDMY KCG
Sbjct: 251 LQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGN 310
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVS 260
++ ARR+FD + ER ++SWN+++ Y ++G + LE+F M+ + ++PD VT+ +V+S
Sbjct: 311 LTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLS 370
Query: 261 ACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ +G+ I + + ++ D +VDM + G++ A +MP
Sbjct: 371 GCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPF 427
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/657 (35%), Positives = 363/657 (55%), Gaps = 75/657 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+++ +K G ++D +F MP+R+ +W S+++G+ Q S+ + F +M +E
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ ++F S LSA A +G +VHA K S V++ ++LI+MY KCG V A+ V
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M R++VSWN+L+ N +AL++F AS + + T ++V+ CA+L
Sbjct: 259 FRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQL 318
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSETSMVS 327
Q+H+ +++ +D + A++D Y+KCG+L++A +F MP +NVVS T+M+
Sbjct: 319 ALARQLHSCVLK-HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIG 377
Query: 328 GYAKASSVKSARLMFTKMLERNV--------------------------VSWN------- 354
G + + + A +F++M E NV + N
Sbjct: 378 GCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSV 437
Query: 355 --ALIAGYTQNGENEEALGLFRLLKRESVC------------------------------ 382
AL+A Y++ G EEAL +F+++ + V
Sbjct: 438 GTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGM 497
Query: 383 -PTHYTFGNLLNACAN-LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +T + ++ACA+ A + GRQ H +K+ R+ + I VG++L+ MY + G
Sbjct: 498 KPNEFTISSAIDACASPTAGIDQGRQFHAISIKY--RY----QDAICVGSALVTMYARKG 551
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
S++ +FE +RD VSWN+MI G AQ+GY EAL F++M G + D T + V+
Sbjct: 552 SIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIV 611
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
C+HAGLV+EG++YF SM +H ++P +HY+CMVDL RAG LDE LIE MP A
Sbjct: 612 GCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGA 671
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++W +LL AC+VH+N+ LG+ A+KLL +EP +S YVLLSN+YA GRW E VRKLM
Sbjct: 672 MVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLM 731
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ V K+ GCSWI+I V+ F+ DK HPL+++IY LK +T +K+ GY PN S
Sbjct: 732 DSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTS 788
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 163/503 (32%), Positives = 235/503 (46%), Gaps = 75/503 (14%)
Query: 104 ASRLFASMPERDQCSWNS-----MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
A + MP RD + +S +V + EAL +FV +H + + L
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106
Query: 159 SACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
C D G Q+H L K + ++V +G+AL+DMY KCG V R VF+GM +RN+
Sbjct: 107 KVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNV 166
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V+W SL+T Y Q SD + +F RM A G+ P+ T SV+SA AS A G ++HA+
Sbjct: 167 VTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQ 226
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ R+ + + N+L++MY+KCG + EA+ VF +M ET
Sbjct: 227 SVKF-GCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM-------ET-------------- 264
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
R++VSWN L+AG N EAL LF + + T+ ++ CAN
Sbjct: 265 ----------RDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCAN 314
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERD 456
L L L RQ H+ V+KHG SD V +++D Y KCG ++D IF M ++
Sbjct: 315 LKQLALARQLHSCVLKHGF------HSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQN 368
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC-------SHAGLVE 509
VSW AMI GC QN A LF +M KP+ T VL A HA +++
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIK 428
Query: 510 E--------GRKYFSSMSK----EHGLAPLK--DH-----YTCMVDLLGRAGCLDEAKTL 550
G +S SK E L+ K DH ++ M+ +AG D A +
Sbjct: 429 TNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNV 488
Query: 551 IEAMPMQ---PDAVIWGSLLAAC 570
M MQ P+ S + AC
Sbjct: 489 FIKMSMQGMKPNEFTISSAIDAC 511
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 212/445 (47%), Gaps = 84/445 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L + +V RRVHA+ +K S +F+ N LI++Y+KCG + A+ VF +M
Sbjct: 204 FTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME 263
Query: 82 NKNVFTWNSIITGL---------------------------------------------- 95
+++ +WN+++ GL
Sbjct: 264 TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQ 323
Query: 96 -----LKWGFIDDASRLFASMPERDQC--------------------SWNSMVSGFAQHD 130
LK GF D + + A M +C SW +M+ G Q+
Sbjct: 324 LHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNA 383
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
A F +M +N +E+++ + L+A S+ + Q+HA + K+ Y +G+
Sbjct: 384 DIPLAAALFSRMREDNVKPNEFTYSTVLTA---SIPILL-PQIHAQIIKTNYQHAPSVGT 439
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
AL+ Y K G A +F + +++V+W+++++CY Q G A VF++M G++P
Sbjct: 440 ALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKP 499
Query: 251 DEVTLASVVSACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
+E T++S + ACAS A +G Q HA ++ + ++ + +G+ALV MYA+ G ++ AR
Sbjct: 500 NEFTISSAIDACASPTAGIDQGRQFHAISIK-YRYQDAICVGSALVTMYARKGSIDSARI 558
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGE 365
VF+R R++VS SM+SGYA+ K A F +M +E + ++ A+I G T G
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGL 618
Query: 366 NEEALGLF-RLLKRESVCPT--HYT 387
+E F ++ ++ PT HY+
Sbjct: 619 VKEGQQYFDSMVMDHNISPTMEHYS 643
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 177/389 (45%), Gaps = 44/389 (11%)
Query: 205 ARRVFDGMRERNIVSWNS----LITCYEQNGPA-SDALEVFVRMMASGIEPDEVTLASVV 259
AR+ DGM R+ + +S I Y + G +AL+ FV + G ++ V+
Sbjct: 48 ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCG-RVQGAAVSRVL 106
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
C + G Q+H ++C R ++ +G ALVDM
Sbjct: 107 KVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDM---------------------- 144
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
Y K V+ R++F M +RNVV+W +L+ GY Q + + LF ++ E
Sbjct: 145 ---------YMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAE 195
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P +TF ++L+A A+ + LGR+ H VK G R S +FV NSLI+MY KC
Sbjct: 196 GVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCR------STVFVCNSLINMYSKC 249
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G VE+ +F M RD VSWN ++ G N + EAL LF K T V+
Sbjct: 250 GLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVI 309
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
C++ + R+ S + K HG + T ++D + G LD+A + MP +
Sbjct: 310 KLCANLKQLALARQLHSCVLK-HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQN 368
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
V W +++ C + +I L + ++ E
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMRE 397
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/598 (36%), Positives = 338/598 (56%), Gaps = 40/598 (6%)
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+++ V N +I K G ID A +F M ++D SWNSM++G Q+ F +A+ +
Sbjct: 133 LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSY 192
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M S ++ SALS+CA +G Q H K DV + + L+ +Y +
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA-SDALEVFVRMMASGIEPDEVTLASV 258
R++ ++VF M ER+ VSWN++I +G + S+A+EVF+ MM +G P+ VT ++
Sbjct: 253 SRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINL 312
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
++ +SL+ K QIHA +++ +++D + NAL+ Y K G++ +F RM R
Sbjct: 313 LATVSSLSTSKLSHQIHALILK-YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER- 370
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
R+ VSWN++I+GY N +A+ L L+ +
Sbjct: 371 -----------------------------RDEVSWNSMISGYIHNELLCKAMDLVWLMMQ 401
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+TF +L+ACA +A L+ G + H ++ L ESD+ +G++L+DMY K
Sbjct: 402 RGQRLDCFTFATVLSACATVATLECGMEVHACAIRACL------ESDVVIGSALVDMYSK 455
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG ++ R F M R+ SWN+MI G A++G+G AL LF +M L G+ PDH+T +GV
Sbjct: 456 CGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGV 515
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLV+EG +YF SM++ +GL P +HY+CMVDLLGRAG LD+ + I MP++P
Sbjct: 516 LSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKP 575
Query: 559 DAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ +IW ++L AC R LG A+ L ++P N+ YVLLSNMYA G+W ++ R
Sbjct: 576 NILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMART 635
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R+ MR+ V K+ GCSW+ + V+VF+ D HP IY LK L ++++ GYVP
Sbjct: 636 RRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVP 693
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 204/409 (49%), Gaps = 47/409 (11%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H + K + SD+++ + LI++Y + G AR++FD M +RN V+W LI+ Y QNG
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACA-SLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
DA V M+ G P+ S + AC S+ ++G Q+H +R + +GN
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
L++MYAKCG ++ AR VF M ++++ VS
Sbjct: 143 GLINMYAKCGDIDHARSVFGLM-------------------------------VDKDSVS 171
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN++I G QN E+A+ + +++ + P+++ + L++CA+L + LG+Q H +
Sbjct: 172 WNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGI 231
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K GL + D+ V N+L+ +Y + + + ++F M+ERD VSWN +I A +G
Sbjct: 232 KLGL------DMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGA 285
Query: 473 G-TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+EA+ +F +M+ G P+ VT I +L S + + + + K + +KD
Sbjct: 286 SVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYN----VKDDN 341
Query: 532 TCMVDLL---GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
LL G++G ++ + + M + D V W S+++ +H ++
Sbjct: 342 AIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG-YIHNELL 389
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 46/228 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD FA +L +C ++ VHA I++ S++ I + L+D+Y+KCG + A +
Sbjct: 406 LDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRF 465
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ M +N+++WNS+I+G + G D+A RLF M Q
Sbjct: 466 FNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLP------------------ 507
Query: 137 GYFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMG 189
+F LSAC+ G VD FK T+V+ L+ + +
Sbjct: 508 -------------DHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHY------ 548
Query: 190 SALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI-TCYEQNGPASD 235
S ++D+ G+ G + + M + NI+ W +++ C NG ++
Sbjct: 549 SCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTE 596
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 327/589 (55%), Gaps = 42/589 (7%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A +LF P+ D WN++V +++H F A+ + +M + +SF L
Sbjct: 121 GEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVL 180
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC+ +MG +VH + + + SDV++ + L+ +Y KCG + A VF + +R IV
Sbjct: 181 KACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIV 240
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I+ Y QNG +AL +F M + + PD + L SV+ A + + G IH +
Sbjct: 241 SWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCV 300
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ +G C FD + S+ S YAK V A
Sbjct: 301 IK---------MG---------------LECEFDLL--------ISLTSLYAKCGHVMVA 328
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
RL F ++ +++ WNA+I+GY +NG EEA+ LFRL+K +++ P T + + ACA +
Sbjct: 329 RLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQI 388
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L+L R ++ R +D+ V SLID Y KCGSV+ +F+ + ++D V
Sbjct: 389 GSLELARWMDEYISMSEFR------NDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV 442
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
W+AM+VG +G G E++ LF M G P+ VT +G+L AC ++GLVEEG F M
Sbjct: 443 VWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM 502
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+++G+ P HY C+VDLLGRAG LD A + MP++P +WG+LL+ACK+HR++ L
Sbjct: 503 -RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTL 561
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
GEY A++L ++P N+G YV LSN+YA W V +VR LMR++G+ K G S IEI G
Sbjct: 562 GEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEING 621
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD---DEAYEE 684
+ F DK HP +KEI+ ++ L R +K G+VP+ D YEE
Sbjct: 622 KLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEE 670
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 202/405 (49%), Gaps = 44/405 (10%)
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
Q++A L + ++ + L++ G VSCAR++FD + ++ WN+++ CY ++
Sbjct: 92 NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRH 151
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G A+E++ RM + + PD + V+ AC++L A + G ++H ++ R +D+ +
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFR-HGFESDVFV 210
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N LV +YAKCG++ A VF R+ R +VS TS++SGYA+
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQ------------------- 251
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
NG+ EAL +F +++ +V P ++L A ++ DL+ G+ H
Sbjct: 252 ------------NGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGC 299
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
V+K GL E D+ + SL +Y KCG V F + + WNAMI G +N
Sbjct: 300 VIKMGLEC----EFDLLI--SLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKN 353
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR--KYFSSMSKEHGLAPLK 528
GY EA+ LF+ M +PD +T+ + AC+ G +E R + SMS+ +
Sbjct: 354 GYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVN 413
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
T ++D + G +D A+ + + +P D V+W +++ +H
Sbjct: 414 ---TSLIDTYAKCGSVDMARFVFDRIP-DKDVVVWSAMMVGYGLH 454
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 193/395 (48%), Gaps = 44/395 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C ++ RRVH +I + F S++F+QN L+ +YAKC
Sbjct: 172 DGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKC---------- 221
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
G I A+ +F + +R SW S++SG+AQ+ + EAL
Sbjct: 222 ---------------------GEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALR 260
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N + S L A D + G +H + K + + +L +Y
Sbjct: 261 IFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYA 320
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V AR F+ + +++ WN++I+ Y +NG A +A+E+F M + I PD +T+ S
Sbjct: 321 KCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTS 380
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ACA + + + + + E RND+++ +L+D YAKCG ++ AR VFDR+P +
Sbjct: 381 SIAACAQIGSLELARWMDEYISMSE-FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDK 439
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLF 373
+VV ++M+ GY + + ++F M + N V++ L+ +G EE LF
Sbjct: 440 DVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLF 499
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
++ + P H + AC + DL LGR H
Sbjct: 500 HRMRDYGIEPRHQHY-----AC--VVDL-LGRAGH 526
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/558 (37%), Positives = 319/558 (57%), Gaps = 38/558 (6%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+N+M+ G DRF+ A+ + MH ++F L ACA F +G +H+L+
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K+ + DV++ + ++ Y KCG + A +VFD M +N+VSW +I + G +A++
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F ++ SG+ PD + V+ ACA L + G I R MR
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWID-RCMR------------------ 232
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+CG RNV TS+V Y K S++ AR +F M+E+++V W+A+I
Sbjct: 233 -ECGL------------SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQ 279
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY NG EA+ LF +++ +V P Y L++CA+L L+LG A GL
Sbjct: 280 GYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAK------GLMN 333
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
S+ +G SLID Y KCGS+E+ +++ M E+D V +NA+I G A G A G
Sbjct: 334 YEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFG 393
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F +M G P+ T +G+LC C+HAGLV++GR YF+SMS + + P +HY CMVDLL
Sbjct: 394 VFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLL 453
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
RAG LDEA LI+ MPM+ + ++WGSLL C++HR L E+V K+L+E+EP NSG YV
Sbjct: 454 ARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYV 513
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSN+Y+ RW E ++R + ++G+ K PG SW+E+ G V+ F+V D HPL+++IY
Sbjct: 514 LLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYE 573
Query: 659 VLKMLTREMKRVGYVPNA 676
L+ L +++K GY P
Sbjct: 574 KLESLFKDLKEAGYNPTT 591
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 202/457 (44%), Gaps = 81/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F+ +L +C R +H+ + K+ F ++F++ ++ Y+KCG
Sbjct: 103 DSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCG--------- 153
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F+ DA ++F M ++ SW M+ G + +F EA+
Sbjct: 154 ----------------------FLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F + + L ACA D + G + + + S +V++ ++L+DMY
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYT 251
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VFDGM E++IV W+++I Y NG +A+E+F M + PD +
Sbjct: 252 KCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVG 311
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+S+CASL A + G LM E+ ++ VLG +L+D YAKCG + EA V+ M +
Sbjct: 312 ALSSCASLGALELG-NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEK 370
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ R++F NA+I+G G+ A G+F +
Sbjct: 371 D--------------------RVVF-----------NAVISGLAMYGQVGAAFGVFGQMG 399
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------ 431
+ + P +TF LL C H +V G + + D V +
Sbjct: 400 KFGIPPNEHTFVGLLCGC-----------THAGLVDDGRHYFNSMSHDFSVTPTIEHYGC 448
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +++ + + M ++ + + W +++ GC
Sbjct: 449 MVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGC 485
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 42/362 (11%)
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N +N++I ++A+ ++ M + I PD T + V+ ACA L F G+ IH
Sbjct: 68 NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ + + D+ + +V Y+KCG L
Sbjct: 128 SLVFK-TGFDCDVFVKTNVVCFYSKCGFL------------------------------- 155
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ A +F M+ +NVVSW +I G + G+ EA+ LFR L + P + +L AC
Sbjct: 156 RDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRAC 215
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A L DL+ GR + + GL ++FV SL+DMY KCGS+E+ +F+ MVE+
Sbjct: 216 ARLGDLESGRWIDRCMRECGL------SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEK 269
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V W+AMI G A NG EA+ LF +M +PD M+G L +C+ G +E G
Sbjct: 270 DIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAK 329
Query: 516 SSMSKEHGLA-PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
M+ E L+ P+ T ++D + G ++EA + + M + D V++ ++++ ++
Sbjct: 330 GLMNYEEFLSNPVLG--TSLIDFYAKCGSMEEALGVYKMMK-EKDRVVFNAVISGLAMYG 386
Query: 575 NI 576
+
Sbjct: 387 QV 388
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/653 (34%), Positives = 345/653 (52%), Gaps = 68/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S ++VH IK+ +F+ N +D+Y+K
Sbjct: 435 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK----------- 483
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+G I DA LF+ +P +D SWN++ G AQ+ EA+
Sbjct: 484 --------------------YGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 523
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M + SF +A++AC+ + G Q+H L K S+ +GS+LID+Y
Sbjct: 524 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 583
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V +R++F + +IV N+LI + QN +A+++F +++ G++P VT +S
Sbjct: 584 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 643
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S C+ G Q+H ++ L +D +LG +L +Y K L +A + MP
Sbjct: 644 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD- 702
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+N+ W A+I+GY QNG + +L F ++
Sbjct: 703 -----------------------------HKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 733
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+V TF ++L AC+++ G++ H + K G F S E + ++LIDMY
Sbjct: 734 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG--FGSYETAT----SALIDMYS 787
Query: 438 KCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V F+ + + D + WN+MIVG A+NGY EAL LF+KM KPD VT +
Sbjct: 788 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 847
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC+H+GL+ EGR +F SM K +GL P DHY C +DLLGR G L EA+ I+ +P
Sbjct: 848 GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 907
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD V+W + LAAC++H++ G+ A+KL+E+EP S YVLLS+++A G W E
Sbjct: 908 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 967
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R+ MR++GV K PGCSWI + ++F+V+DK HP N IY +L LT MK+
Sbjct: 968 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1020
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 282/593 (47%), Gaps = 87/593 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C R ++ R+VH ++KS F+S +F + L+D+YAKCG + AR+VF
Sbjct: 167 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 226
Query: 78 DKMSNKNVFTWNS-----------------------------------IITGLLKWGFID 102
D ++ + W+S II+ L G +D
Sbjct: 227 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLD 286
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A+ L MP +WN+++SG AQ LG + M S + +F S LSA A
Sbjct: 287 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 346
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
F G Q+HA ++V++GS+LI++Y KCG S A+ VFD E+NIV WN+
Sbjct: 347 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 406
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
++T + QN +A+ +F MM ++ DE T S++ AC L++F G Q+H C
Sbjct: 407 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVH-----CV 461
Query: 283 KLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++N L + NA +DMY+K G + +A+ +F +P
Sbjct: 462 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY---------------------- 499
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
++ +SWNAL G QN E EEA+ + + ++ + P +F +NAC+N+
Sbjct: 500 ---------KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 550
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ G+Q H +K+G+ S+ VG+SLID+Y K G VE +IF + V
Sbjct: 551 RATETGKQIHCLAIKYGIC------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIV 604
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
NA+I G QN EA+ LF+++L G KP VT +L CS + G++
Sbjct: 605 PINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYT 664
Query: 519 SKEHGLAPLKDHYTCMVDLLG---RAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K L D V L G ++ L++A L+ MP + W ++++
Sbjct: 665 LKS---GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 714
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 56/496 (11%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGT 171
ER + +S++S A+ + LG F + + ++ LSAC+ G
Sbjct: 129 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 188
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
QVH + KS +SS V+ +AL+DMY KCG V ARRVFDG+ + + W+S+I CY + G
Sbjct: 189 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 248
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+AL +F RM G PD+VTL +++S AS G HA + + V
Sbjct: 249 CYQEALALFSRMDKMGSAPDQVTLVTIISTLAS-----SGRLDHATALLKKMPTPSTVAW 303
Query: 292 NALVDMYAKCGKLNEARCVFDRM------PIR---------------------------- 317
NA++ +A+ G ++ M P R
Sbjct: 304 NAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM 363
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
NV +S+++ YAK A+ +F E+N+V WNA++ G+ QN EEA+ +
Sbjct: 364 HGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRM 423
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R ++ +TF ++L AC L+ LG+Q H +K+ + + +FV N+
Sbjct: 424 FQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM------DISLFVANAT 477
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY K G++ D +F + +D +SWNA+ VG AQN EA+ + K+M L G PD
Sbjct: 478 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 537
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL-- 550
V+ + ACS+ E G++ ++ ++G+ + ++DL + G ++ ++ +
Sbjct: 538 VSFSTAINACSNIRATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 596
Query: 551 -IEAMPMQP-DAVIWG 564
++A + P +A+I G
Sbjct: 597 QVDASSIVPINALIAG 612
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 209/428 (48%), Gaps = 71/428 (16%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF--VRMMA 245
+G +L+++Y K GRV A ER + +SL++C+ ++G D L F +R A
Sbjct: 103 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 162
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G PD+ LA V+SAC+ + G Q+H +++ + + ALVDMYAKCG +
Sbjct: 163 GG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVK-SGFSSSVFCEAALVDMYAKCGDVP 220
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT---------------------- 343
AR VFD + + + +SM++ Y + + A +F+
Sbjct: 221 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 280
Query: 344 -------------KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
KM + V+WNA+I+G+ Q+G LGL++ ++ + PT TF +
Sbjct: 281 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 340
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+A AN+ G+Q H V HGL ++++FVG+SLI++Y KCG D +F+
Sbjct: 341 MLSAAANMKAFVEGQQMHAAAVMHGL------DANVFVGSSLINLYAKCGCPSDAKNVFD 394
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
E++ V WNAM+ G QN EA+ +F+ M+ + D T + +L AC+
Sbjct: 395 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT------- 447
Query: 511 GRKYFSS--MSKEHGLAPLKDHYTCM----------VDLLGRAGCLDEAKTLIEAMPMQP 558
Y SS + K+ +K+ CM +D+ + G + +AK L +P +
Sbjct: 448 ---YLSSFYLGKQVHCVTIKN---CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK- 500
Query: 559 DAVIWGSL 566
D++ W +L
Sbjct: 501 DSISWNAL 508
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 34/313 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAK 66
+Q++ D S F+ +L C S + + ++VH +KS + + L +Y K
Sbjct: 627 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLK 686
Query: 67 CGCLYGARKVFDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
L A K+ +M + KN+F W +II+G + G+ D +S+VS
Sbjct: 687 SKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD-----------------HSLVS- 728
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
F +M N E +F S L AC+ F G ++H L++KS + S
Sbjct: 729 -------------FWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 775
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMM 244
SALIDMY KCG V + F ++ + +I+ WNS+I + +NG A +AL +F +M
Sbjct: 776 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 835
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
I+PDEVT V+ AC EG + + L L +D+ + G L
Sbjct: 836 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHL 895
Query: 305 NEARCVFDRMPIR 317
EA+ D++P R
Sbjct: 896 QEAQEAIDQLPFR 908
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R + T HG G +G+SL+++Y K G V ER + ++++
Sbjct: 80 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 139
Query: 465 VGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
A++G + LG F+ + G +PD + VL ACS G++ GR+ + K G
Sbjct: 140 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 198
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ +VD+ + G + A+ + + + PD + W S++A
Sbjct: 199 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSSMIA 242
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 339/620 (54%), Gaps = 72/620 (11%)
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+ D+ RLF ++ +W S++ + H ++LG F+ M + F S L
Sbjct: 55 LLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLK 114
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK-------------CGRV---- 202
+CA +D +G +H + + D+Y G+AL++MY K G V
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174
Query: 203 ---------------SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
R++F+ M E+++VSWN++I +NG + L + M +
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++PD TL+SV+ A G +IH +R + L D+ + ++L+DMYAKC ++ +
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIR-QGLDADIYVASSLIDMYAKCTRVAD- 292
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
S R+ FT + ER+ +SWN++IAG QNG +
Sbjct: 293 -----------------------------SCRV-FTLLTERDGISWNSIIAGCVQNGLFD 322
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
E L FR + + P Y+F +++ ACA+L L LG+Q H ++ ++G + +IF
Sbjct: 323 EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF------DENIF 376
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ +SL+DMY KCG++ +IF+ M RD VSW AMI+GCA +G +A+ LF++M G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KP+HV + VL ACSH GLV+E KYF+SM+++ G+AP +HY + DLLGRAG L+EA
Sbjct: 437 IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I M + P IW +LL+AC+VH NI + E VA ++LE++P+N+G Y+LL+N+Y+
Sbjct: 497 YDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 556
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
RW E + R MR+ G+ K P CSWIE+ V FM D+ HP ++I +++L M
Sbjct: 557 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 616
Query: 668 KRVGYVPNASD--DEAYEEQ 685
++ GYVP+ S+ + EEQ
Sbjct: 617 EKEGYVPDTSEVHHDVEEEQ 636
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 204/390 (52%), Gaps = 21/390 (5%)
Query: 4 QRSVKQIVGDLA---FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
+S+ +G LA + D + F +L SC ++ +H II+ +++ N L
Sbjct: 88 HQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNAL 147
Query: 61 IDVYAKCGCL-------YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
+++Y+K L GA +VFD+M+ + T + +L D ++F MPE
Sbjct: 148 MNMYSKLRFLEESGRQRLGAGEVFDEMTER---TRSVRTVSVLSE---DSVRKIFEMMPE 201
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+D SWN++++G A++ + E L +M N ++ S L A +VD G ++
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI 261
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H + +D+Y+ S+LIDMY KC RV+ + RVF + ER+ +SWNS+I QNG
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLF 321
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+ L F +M+ + I+P + +S++ ACA L G Q+H + R ++ + ++
Sbjct: 322 DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFIASS 380
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERN 349
LVDMYAKCG + A+ +FDRM +R++VS T+M+ G A A +F +M ++ N
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPN 440
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V++ A++ + G +EA F + R+
Sbjct: 441 HVAFMAVLTACSHGGLVDEAWKYFNSMTRD 470
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 31/305 (10%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
T R ++++ G DS + +L + +S + +H I+ ++I++ + LID
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+YAKC + D+ R+F + ERD SWNS+
Sbjct: 283 MYAKCT-------------------------------RVADSCRVFTLLTERDGISWNSI 311
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++G Q+ F E L +F +M YSF S + ACA +G Q+H ++++ +
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++++ S+L+DMY KCG + A+++FD MR R++VSW ++I +G A DA+E+F +
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M GI+P+ V +V++AC+ E + + R + + A+ D+ + G
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAG 491
Query: 303 KLNEA 307
+L EA
Sbjct: 492 RLEEA 496
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 34/196 (17%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F+ ++ +C ++ +++H I ++ F IFI + L+D+YAKC
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC----------- 388
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
G I A ++F M RD SW +M+ G A H + +A+
Sbjct: 389 --------------------GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 139 FVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + +F + L+AC+ G VD + +++ + V +A+ D+
Sbjct: 429 FEQMETEGIKPNHVAFMAVLTACSHGGLVD-EAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487
Query: 197 GKCGRVSCARRVFDGM 212
G+ GR+ A GM
Sbjct: 488 GRAGRLEEAYDFICGM 503
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 350/656 (53%), Gaps = 70/656 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C ++ R VHA++ ASE L ++Y KC AR+VFD+
Sbjct: 19 FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDR-- 76
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
MP RD+ +WN++V+G+A++ S A+ V+
Sbjct: 77 -----------------------------MPSRDRVAWNAVVAGYARNGLPSSAMEAVVR 107
Query: 142 MHSENFA--LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M E + S L ACA + +VHA ++ V + +A++D Y KC
Sbjct: 108 MQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKC 167
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR VFD M RN VSWN++I Y NG A++A+ +F RM+ G++ + ++ + +
Sbjct: 168 GAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAAL 227
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC L E ++H L+R L +++ + NAL+ YAKC + + A VF+ + +
Sbjct: 228 QACGELGYLDEVRRVHELLVRV-GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNK-- 284
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ +SWNA+I G+TQN E+A LF ++ E
Sbjct: 285 ----------------------------KTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+V P +T +++ A A+++D R H + ++H L + D++V +LIDMY KC
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL------DQDVYVLTALIDMYSKC 370
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G V R+F++ +R ++WNAMI G +G+G A+ LF++M G P+ T + VL
Sbjct: 371 GRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVL 430
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSHAGLV+EG+KYF+SM K++GL P +HY MVDLLGRAG LDEA + I+ MP++P
Sbjct: 431 AACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPG 490
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
++G++L ACK+H+N+ L E A+ + E+ P +VLL+N+YA W +V RVR
Sbjct: 491 ISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTA 550
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
M K+G+ K PG S I++ V+ F H K+IY L L E+K +GYVP+
Sbjct: 551 MEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPD 606
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 203/458 (44%), Gaps = 82/458 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS +L +C ++++ R VHA +++ + + ++D Y KCG + AR VF
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D MP R+ SWN+M+ G+A + +EA+
Sbjct: 178 D-------------------------------CMPVRNSVSWNAMIDGYADNGNATEAMA 206
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E +++ S +AL AC +VH LL + SS+V + +ALI Y
Sbjct: 207 LFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYA 266
Query: 198 KCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC R A +VF+ + ++ +SWN++I + QN DA +F RM + PD TL
Sbjct: 267 KCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLV 326
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ A A ++ + IH +R +L D+ + AL+DMY+KCG+++ AR +FD
Sbjct: 327 SVIPAVADISDPLQARWIHGYSIR-HQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARD 385
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+V++ +M+ GY +G + A+ LF +
Sbjct: 386 RHVITWNAMIHGYG-------------------------------SHGFGQAAVELFEEM 414
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------N 430
K P TF ++L AC +H +V G ++ + + D +
Sbjct: 415 KGTGSLPNETTFLSVLAAC-----------SHAGLVDEGQKYFASMKKDYGLEPGMEHYG 463
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+++D+ + G +++ + M +E + AM+ C
Sbjct: 464 TMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGAC 501
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 13/247 (5%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P TF LL CA ADL GR H + GL S+ +L +MY KC
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGL------ASESIASTALANMYFKCRRP 67
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML--LCGEKPDHVTMIGVLC 500
D R+F+ M RD V+WNA++ G A+NG + A+ +M GE+PD VT++ VL
Sbjct: 68 ADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLP 127
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+ A + R+ + + GL L + T ++D + G ++ A+ + + MP++ ++
Sbjct: 128 ACADARALHACRE-VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NS 185
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA--ELGRWGEVVRVRK 618
V W +++ + N + ++++ E + +L+ + A ELG EV RV +
Sbjct: 186 VSWNAMIDGYADNGNATEAMALFWRMVQ-EGVDVTDASVLAALQACGELGYLDEVRRVHE 244
Query: 619 LMRKRGV 625
L+ + G+
Sbjct: 245 LLVRVGL 251
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/689 (34%), Positives = 363/689 (52%), Gaps = 98/689 (14%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P LL +C K++ R +HA++IK+ + + ++LI+ C+ FD +
Sbjct: 4 PSLSLLHNC---KTLQSLRMIHAQMIKTGLHNTNYALSKLIEF-----CVLSPH--FDGL 53
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
A +F ++ E + WN+M G A AL +V
Sbjct: 54 PY---------------------AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYV 92
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + Y+F L +CA S F+ G Q+H + K Y D+Y+ ++LI MY + G
Sbjct: 93 CMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNG 152
Query: 201 RVSCARRVFDGMRERNIVS-------------------------------WNSLITCYEQ 229
R+ AR+VFD R++VS WN++I+ Y +
Sbjct: 153 RLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAE 212
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +ALE+F MM + + PDE T+ SVVSACA A+ + G Q+H+ + ++L
Sbjct: 213 TGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS-WIDDHGFGSNLK 271
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NAL+D+Y KCG+ V++A +F + ++
Sbjct: 272 IVNALIDLYIKCGE-------------------------------VETACGLFEGLSYKD 300
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V+SWN LI GYT +EAL LF+ + R P T ++L ACA+L +++GR H
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHV 360
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K L G + SLIDMY KCG +E ++F++++ R SWNAMI G A
Sbjct: 361 YINKR----LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 416
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G A +F +M +PD +T +G+L ACSH+G+++ GR F SM +++ + P +
Sbjct: 417 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLE 476
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CM+DLLG +G EA+ +I M M+PD VIW SLL ACK++ N+ LGE A+ L++I
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKI 536
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
EP N G YVLLSN+YA GRW EV ++R L+ +G+ K PGCS IEI V+ F++ DK
Sbjct: 537 EPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 596
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNASD 678
HP N+EIY +L+ + ++ G+VP+ S+
Sbjct: 597 HPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 33/299 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S ++ +C +S S+ R+VH+ I F S + I N LID+Y KCG + A +F
Sbjct: 234 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 293
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +S K+V +WN++I G+ + + EAL
Sbjct: 294 EGLSYKDVISWNTLI-------------------------------GGYTHMNLYKEALL 322
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALIDM 195
F +M + ++ + S L ACA ++G +H ++K ++ ++LIDM
Sbjct: 323 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 382
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + A++VFD + R++ SWN++I + +G A+ A ++F RM + IEPD++T
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 442
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
++SAC+ G I + K+ L ++D+ G EA + + M
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 501
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/686 (33%), Positives = 369/686 (53%), Gaps = 108/686 (15%)
Query: 25 LLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+L S LR+ S++ ++HA+ + + + +LID+++ + AR V D+ +
Sbjct: 1 MLLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSP 56
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
F+WNS+I + H +L ++KM
Sbjct: 57 TDFSWNSLI-------------------------------RAYTVHGSPQNSLFLYLKML 85
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ S ++F L AC+ G Q+H + + + SD+++ ++LIDMY KC R+
Sbjct: 86 RSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLD 145
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDA--------------------------- 236
AR +D M R+ VSWNS+I+ Y Q G A
Sbjct: 146 SARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEG 205
Query: 237 -----LEVFVRMMASG--IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
L +F +M+ S ++P+ T+ ++SAC++L ++ G + + + K+ + +
Sbjct: 206 DFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVG-RFLSVFIDVNKIPLNTI 264
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L AL+DMY+KCG + +A +FD + + N
Sbjct: 265 LVTALIDMYSKCGDVEKAWRIFDGVSCK-------------------------------N 293
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
+ SWNA+I G Q G EEA+ L+R +K +SV P T N+L+ACA L L+LGR+ H
Sbjct: 294 LPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHL 353
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ ++GL + ++ + +L+DMY KCG ++D C IF E+D WNAMI+G A
Sbjct: 354 YLGRNGL------DLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAY 407
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G G ++L +F +M+ G +P+ VT IGVL AC+H+GLVEEGR FSSM+ +HGL+P +
Sbjct: 408 HGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLE 467
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CMVDLLGRAG L EA L++ M + PD++IWG+LL+AC++HRN+ L + +++ ++
Sbjct: 468 HYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMAS 527
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
+ N G +LLSN+YA GRW +V RVR+ ++++ + K GCSW+E+ G V+ F+V+D
Sbjct: 528 QDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTT 587
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPN 675
H + EIY ++L +K GYV N
Sbjct: 588 HLKSGEIYGAYEILVNHLKAEGYVAN 613
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 239/451 (52%), Gaps = 43/451 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C SV + ++H +++ F S++F+ N LID+Y KC L AR +D M
Sbjct: 96 FPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMG 155
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++ +WNSII+G ++WG ++ A LF MP R+ W +M++G+ + F E L F
Sbjct: 156 FRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFR 215
Query: 141 KM--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+M ++ + + LSAC+ ++++G + + ++ + + +ALIDMY K
Sbjct: 216 QMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSK 275
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG V A R+FDG+ +N+ SWN++IT Q G +A++++ M A ++P+E+TL +V
Sbjct: 276 CGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNV 335
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA L A + G ++H L R L +++L ALVDMYAKCGK+++A C
Sbjct: 336 LSACAGLGALELGREVHLYLGR-NGLDLNVILATALVDMYAKCGKIDDA-C--------- 384
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
L+F K E++V WNA+I G +G+ ++L +F + R
Sbjct: 385 ---------------------LIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVR 423
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGR-QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P TF +L+AC + ++ GR Q + KHGL + ++D+
Sbjct: 424 AGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGL------SPKLEHYACMVDLLG 477
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G +++ + + M + D + W A++ C
Sbjct: 478 RAGHLKEAYELVQNMLIPPDSIIWGALLSAC 508
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/657 (34%), Positives = 358/657 (54%), Gaps = 74/657 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARII---KSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
LL +KS+ + +HA+++ ++ S+I N LI++Y+KCG ARK+FD+
Sbjct: 29 LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR-- 86
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M +R+ SW++++ G+ E LG F
Sbjct: 87 -----------------------------MLQRNVVSWSALMMGYLHKGEVLEVLGLFRN 117
Query: 142 MHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ S + A +EY F LS CA S K G Q H L KS Y+ +ALI MY +C
Sbjct: 118 LVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
V A ++ D + ++ S+NS+++ ++G +A +V RM+ + D VT SV+
Sbjct: 178 HVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLG 237
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
CA + + GLQIHA+L++ L D+ + + L+D Y KCG+
Sbjct: 238 LCAQIRDLQLGLQIHAQLLK-TGLVFDVFVSSTLIDTYGKCGE----------------- 279
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
V +AR F + +RNVV+W A++ Y QNG EE L LF ++ E
Sbjct: 280 --------------VLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELED 325
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +TF LLNACA+L L G H +V +SG ++ + VGN+LI+MY K G
Sbjct: 326 TRPNEFTFAVLLNACASLVALAYGDLLHGRIV------MSGFKNHLIVGNALINMYSKSG 379
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+++ +F M+ RD ++WNAMI G + +G G +AL +F+ M+ GE P++VT IGVL
Sbjct: 380 NIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLS 439
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP-MQPD 559
AC H LV+EG YF + K+ + P +HYTCMV LLGRAG LDEA+ ++ ++ D
Sbjct: 440 ACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWD 499
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
V W +LL AC +HRN LG+ + + +++++P + G Y LLSNM+A+ +W VV++RKL
Sbjct: 500 VVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKL 559
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
M++R + K+PG SW++I + +VF+ + HP + +I+ ++ L +K +GY P+
Sbjct: 560 MKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDV 616
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 225/458 (49%), Gaps = 72/458 (15%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D A+ + F +L C S V + ++ H ++KS +++N LI +Y++C +
Sbjct: 122 DSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDS 181
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS-WNSMVSGFAQHDR 131
A ++ D + +VF++NSI++ L++ G +A+++ M D+C W+S+
Sbjct: 182 AMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMV--DECVIWDSV--------- 230
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
++ S L CA D ++G Q+HA L K+ DV++ S
Sbjct: 231 ---------------------TYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSST 269
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LID YGKCG V AR+ FDG+R+RN+V+W +++T Y QNG + L +F +M P+
Sbjct: 270 LIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPN 329
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
E T A +++ACASL A G +H R++ +N L++GNAL++MY+K G ++ + VF
Sbjct: 330 EFTFAVLLNACASLVALAYGDLLHGRIVM-SGFKNHLIVGNALINMYSKSGNIDSSYNVF 388
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
M R+V++ +M+ GY+ K A L+F M+ GE
Sbjct: 389 SNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSA---------------GE------ 427
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
CP + TF +L+AC +LA +Q G ++K +F E +
Sbjct: 428 ----------CPNYVTFIGVLSACVHLALVQEGFYYFDQIMK---KF--DVEPGLEHYTC 472
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDW--VSWNAMIVGC 467
++ + + G +++ +T + W V+W ++ C
Sbjct: 473 MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNAC 510
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 31/301 (10%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+K++V + DS + +L C + + + ++HA+++K+ ++F+ + LID Y K
Sbjct: 217 LKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGK 276
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG + ARK FD + ++NV W +++T L
Sbjct: 277 CGEVLNARKQFDGLRDRNVVAWTAVLTAYL------------------------------ 306
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
Q+ F E L F KM E+ +E++F L+ACA V G +H + S + + +
Sbjct: 307 -QNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHL 365
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+G+ALI+MY K G + + VF M R++++WN++I Y +G AL VF MM++
Sbjct: 366 IVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSA 425
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G P+ VT V+SAC LA +EG ++M+ + L +V + + G L+E
Sbjct: 426 GECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDE 485
Query: 307 A 307
A
Sbjct: 486 A 486
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/692 (33%), Positives = 356/692 (51%), Gaps = 114/692 (16%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N L+ +K G + AR++FDKM ++ FTWN++I + DA +LF S P ++
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+++SG+ + EA F +M S+ +EY+ GS L C V G Q+H
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDA 236
K+ + DV + + L+ MY +C R+S A +F+ M E+N V+W S++T Y QNG A A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+E F + G + ++ T SV++ACAS++A + G+Q+H +++ + ++ + +AL+D
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQSALID 270
Query: 297 MYAKC-------------------------------GKLNEARCVFDRMPIRNV------ 319
MYAKC G + EA +F RM R++
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 320 ---------VSETSM-------------------------VSGYAKASSVKSARLMFTKM 345
+S T M V YAK + SA +F M
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+E++V+SW AL+ G T NG +EAL LF ++ + P ++L+A A L L+ G+
Sbjct: 391 IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQ 450
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H + +K SG S + V NSL+ MY KCGS+ED IF +M RD ++W +IV
Sbjct: 451 QVHGNYIK------SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G A+NG L+E+ ++YF SM +G+
Sbjct: 505 GYAKNG-----------------------------------LLEDAQRYFDSMRTVYGIT 529
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY CM+DL GR+G + + L+ M ++PDA +W ++LAA + H NI GE AK
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L+E+EP+N+ PYV LSNMY+ GR E VR+LM+ R + K+PGCSW+E G V+ FM
Sbjct: 590 LMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMS 649
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+D+RHP EIY + + +K GY + S
Sbjct: 650 EDRRHPRMVEIYSKVDEMMLLIKEAGYFADMS 681
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 173/325 (53%), Gaps = 33/325 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + +VH I+KS F + I++Q+ LID+YAKC + AR + + M
Sbjct: 230 FPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME 289
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G ++ G I +A +F M ERD
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD-------------------------- 323
Query: 142 MHSENFALSEYSFGSALSACAGS-VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ +++ S L+ A S + K+ + H L+ K+ Y++ + +AL+DMY K G
Sbjct: 324 -----MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF+GM E++++SW +L+T NG +AL++F M GI PD++ ASV+S
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A A L + G Q+H ++ + L + N+LV MY KCG L +A +F+ M IR+++
Sbjct: 439 ASAELTLLEFGQQVHGNYIK-SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Query: 321 SETSMVSGYAKASSVKSARLMFTKM 345
+ T ++ GYAK ++ A+ F M
Sbjct: 498 TWTCLIVGYAKNGLLEDAQRYFDSM 522
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/637 (35%), Positives = 342/637 (53%), Gaps = 89/637 (13%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+H IK + +F+ N L+D Y K G L AR+VF +M +K+ T+N+++ G K G
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
A +LFA+M +G+++H +H L +YS
Sbjct: 431 HTQALQLFAAMRR----------AGYSRH-----------PLH-----LLQYSH------ 458
Query: 161 CAGSVDFKMGTQVHALLSKSRYSS--DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
S+SR +S +V++ ++L+D Y KC + RR+FD M ER+ V
Sbjct: 459 -----------------SRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 501
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
S+N +I Y N A+ L +F M G + + A+++S SL G QIHA+L
Sbjct: 502 SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQL 561
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ DL LGNAL+DMY+KCG L+ A+
Sbjct: 562 VLLGLASEDL-LGNALIDMYSKCGMLDAAKS----------------------------- 591
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
F+ E++ +SW ALI GY QNG++EEAL LF ++R + P TF +++ A ++L
Sbjct: 592 --NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSL 649
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A + LGRQ H+++++ SG +S +F G+ L+DMY KCG +++ R F+ M ER+ +
Sbjct: 650 AMIGLGRQLHSYLIR------SGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSI 703
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I A G A+ +F+ ML CG PD VT + VL ACSH GL +E KYF M
Sbjct: 704 SWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 763
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
++ ++P K+HY C++D LGR GC + + ++ MP + D +IW S+L +C++H N L
Sbjct: 764 KHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQEL 823
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
A KL +EP+++ PYV+LSN+YA G+W + V+K+MR RGV K+ G SW+EI
Sbjct: 824 ARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQ 883
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ F D P+ EI L L +EM + GY P+
Sbjct: 884 KIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 920
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P+A +L V +++HA+++ ASE + N LID+Y+KCG L A+ F
Sbjct: 537 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 596
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S K+ +W ++ITG ++ G QH+ EAL F
Sbjct: 597 SEKSAISWTALITGYVQNG----------------------------QHE---EALQLFS 625
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M +F S + A + +G Q+H+ L +S Y S V+ GS L+DMY KCG
Sbjct: 626 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 685
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A R FD M ERN +SWN++I+ Y G A +A+++F M+ G PD VT SV++
Sbjct: 686 CLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLA 745
Query: 261 ACA 263
AC+
Sbjct: 746 ACS 748
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 33/270 (12%)
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G L+ AR +FD+MP +N+ S ++S Y+ + + +A+ +F RN +W ++ +
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
G +AL LFR + E V P T +LN H +K GL
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP-----SLHPFAIKFGL----- 380
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
++ +FV N+L+D Y K G + R+F M ++D V++NAM++GC++ G T+AL LF
Sbjct: 381 -DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFA 439
Query: 482 KMLLCG--EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
M G P H+ +Y S S+ + + + ++D
Sbjct: 440 AMRRAGYSRHPLHLL------------------QYSHSRSRSTSVLNVFVN-NSLLDFYS 480
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ CLD+ + L + MP + D V + ++AA
Sbjct: 481 KCDCLDDMRRLFDEMP-ERDNVSYNVIIAA 509
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + F+ ++ + + R++H+ +I+S + S +F + L+D+YAKCGCL A + F
Sbjct: 635 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 694
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHDRFS 133
D+M +N +WN++I+ +G +A ++F M D ++ S+++ + +
Sbjct: 695 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 754
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSA 191
E + YF M +++S + AC ++G +QV +L + + +D + ++
Sbjct: 755 ECMKYFHLM-KHQYSISPW---KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 810
Query: 192 LIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDA 236
++ G AR D GM + + L Y + G DA
Sbjct: 811 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 858
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/608 (37%), Positives = 345/608 (56%), Gaps = 47/608 (7%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V +N++I +K G + A ++F +MP R+ S N ++SG+A R +AL +
Sbjct: 49 DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LR 105
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+F L+EY SA++A A + MG Q H K+ + Y+ SA++ MY +C +
Sbjct: 106 VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMD 165
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A +VFD + N+ ++NS+I + G + + M+ + + D V+ +V+ CA
Sbjct: 166 EAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCA 225
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S G Q+H + ++ +L ++ +G+ALVDMY KC +EA VF+ +P
Sbjct: 226 STKEVVLGSQVHTQALK-RRLELNVYVGSALVDMYGKCDFPHEANRVFEVLP-------- 276
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
E+N+VSW A++ YTQN E+AL LF ++ E V P
Sbjct: 277 -----------------------EKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRP 313
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+T+ LN+CA LA L+ G +K +G + V N+L++MY K GSVE
Sbjct: 314 NEFTYAVALNSCAGLATLKNGNALGACTMK------TGHWGLLPVCNALMNMYSKSGSVE 367
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
D R+F +M RD VSWN++I+G A +G EA+ F ML E P +VT IGVL AC+
Sbjct: 368 DARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACA 427
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
GLV+EG Y + M KE G+ P K+HYTCMV LL R G LDEA+ IE+ + D V W
Sbjct: 428 QLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAW 487
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
SLL++C+V+RN LG VA+++ +++P + G YVLLSNMYA+ RW VV+VR+LMR+
Sbjct: 488 RSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMREL 547
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------ 677
GV K+PG SWI++ V+VF +DK+HP ++I L+ L ++K +GYVPN +
Sbjct: 548 GVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDV 607
Query: 678 DDEAYEEQ 685
+DE EE
Sbjct: 608 EDEQKEEH 615
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 208/436 (47%), Gaps = 81/436 (18%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+ H IK+ A ++ + ++ +Y +C + A KVFD +S+ NVF +NS+I G L
Sbjct: 133 RQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDR 192
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G +D ++ + SM R+ W+ + S+ + L
Sbjct: 193 GQMDGSTSIVRSMV-RNVGQWDHV------------------------------SYVAVL 221
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
CA + + +G+QVH K R +VY+GSAL+DMYGKC A RVF+ + E+NIV
Sbjct: 222 GHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIV 281
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW +++T Y QN DAL++F+ M G+ P+E T A +++CA LA K G + A
Sbjct: 282 SWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACT 341
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
M+ L + NAL++MY+K G + +AR VF MP R+VVS S++ GYA
Sbjct: 342 MKTGHW-GLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYA-------- 392
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+G EA+ F + P++ TF +L+ACA
Sbjct: 393 -----------------------HHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACA-- 427
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------NSLIDMYMKCGSVEDGCRIFET- 451
QLG +V G +L+ ++ V ++ + + G +++ R E+
Sbjct: 428 ---QLG------LVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESN 478
Query: 452 MVERDWVSWNAMIVGC 467
+ D V+W +++ C
Sbjct: 479 CIGTDVVAWRSLLSSC 494
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 46/300 (15%)
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +HAR++R + D+V N L+ +Y KCG+L AR VFD MP RN VS
Sbjct: 35 GKAVHARVVRAARF--DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSG-------- 84
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
N L++GY +G + +AL L R+ Y +
Sbjct: 85 -----------------------NLLMSGYASSGRHRDALALLRV---ADFGLNEYVLSS 118
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+ A A++ +GRQ H + +K GL +V ++++ MY +C +++ ++F+
Sbjct: 119 AVAATAHVRSYDMGRQCHGYAIKAGL------AEHPYVCSAVLHMYCQCAHMDEAVKVFD 172
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ + ++N+MI G G + + + M+ + DHV+ + VL C+ V
Sbjct: 173 NVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVL 232
Query: 511 GRKYFSSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G + + K L + + +VD+ G+ EA + E +P + + V W +++ A
Sbjct: 233 GSQVHTQALKRR--LELNVYVGSALVDMYGKCDFPHEANRVFEVLP-EKNIVSWTAIMTA 289
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 65/281 (23%)
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+L LG+ H VV+ RF D+ N+LI +Y+KCG + ++F+ M R+ V
Sbjct: 30 GELSLGKAVHARVVR-AARF------DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPV 82
Query: 459 SWNAMIVGCAQNGYGTEALGLFK-----------------------------------KM 483
S N ++ G A +G +AL L + K
Sbjct: 83 SGNLLMSGYASSGRHRDALALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKA 142
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
L ++ + C C+H ++E K F ++S + A + M++ G
Sbjct: 143 GLAEHPYVCSAVLHMYCQCAH---MDEAVKVFDNVSSFNVFA-----FNSMINGFLDRGQ 194
Query: 544 LDEAKTLIEAMPM---QPDAVIWGSLLAACKVHRNIMLGEYVA----KKLLEIEPSNSGP 596
+D + +++ +M Q D V + ++L C + ++LG V K+ LE+ N
Sbjct: 195 MDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLEL---NVYV 251
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L +MY + E RV +++ ++ +V SW I+
Sbjct: 252 GSALVDMYGKCDFPHEANRVFEVLPEKNIV-----SWTAIM 287
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/670 (35%), Positives = 354/670 (52%), Gaps = 82/670 (12%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ + NS++T K G + A R+F M RD SW +M ++ EAL
Sbjct: 76 DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKM--GTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+M + ++ +A AC F+ GT + + + +DV +G ALIDM+ +
Sbjct: 136 EMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFAR 195
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + AR+VF+G+ ER +V W +IT Y Q G A A+E+F+ M+ G EPD T++S+
Sbjct: 196 NGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSM 255
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG---KLNEARCVFDRMP 315
VSACA + G Q+H+ ++R L +D + LVDMY K + AR VF RMP
Sbjct: 256 VSACAEQGSAGLGQQLHSLVLRL-GLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314
Query: 316 IRNVVSETSMVSGYAK---------------------------ASSVKS----------- 337
NV+S T+++SGY + +S +K+
Sbjct: 315 THNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGR 374
Query: 338 ---ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH--------- 385
AR+M T + NVV NAL++ Y ++G EEA F L ++ T
Sbjct: 375 QIHARVMKTSIGNVNVVG-NALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRS 433
Query: 386 -----------------YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+TF +LL+A A + G+Q H +K G ESD +
Sbjct: 434 NASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGF------ESDKGI 487
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSL+ MY +CG ++D CR F+ M + + +SW ++I A++G+ AL LF M+L G
Sbjct: 488 SNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSG 547
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KP+ VT I VL ACSH GLV+EG++YF SM K+H L P +HY CMVDLL R+G + EA
Sbjct: 548 VKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEA 607
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I MP + DA++W +LL AC+ + NI +GE A+ ++++EP + PYVLLSN+YA
Sbjct: 608 LEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHG 667
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W EV R+R LMR R + K+ G SW+ + ++ F D HP +EIY L +L RE+
Sbjct: 668 GLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREI 727
Query: 668 KRVGYVPNAS 677
K +GYVP+ S
Sbjct: 728 KDIGYVPDTS 737
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 70/370 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + ++ +C S +++H+ +++ S+ + L+D+Y K + AR
Sbjct: 248 DGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECAR 307
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDD---------------------ASRLFASMPE 113
KVF +M NV +W ++I+G ++ G ++ +S L A
Sbjct: 308 KVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANL 367
Query: 114 RDQCS-------------------WNSMVSGFAQHDRFSEALGYFVKMHSENF------- 147
DQ S N++VS +A+ EA F +++ N
Sbjct: 368 SDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI 427
Query: 148 -------------------ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+S ++F S LSA A G Q+HAL K+ + SD +
Sbjct: 428 GETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGI 487
Query: 189 GSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
++L+ MY +CG + A R FD M + N++SW S+I+ ++G A AL +F M+ SG
Sbjct: 488 SNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSG 547
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++P++VT +V+SAC+ + KEG + + + +L + +VD+ A+ G + EA
Sbjct: 548 VKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEA 607
Query: 308 RCVFDRMPIR 317
+ MP +
Sbjct: 608 LEFINEMPCK 617
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 114/247 (46%), Gaps = 36/247 (14%)
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +H RL+ E L D ++ N+L+ MY+KCG + AR VFD M R +
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGM--RGL----------- 108
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
R++VSW A+ T+NG +EAL L + + P +T
Sbjct: 109 -----------------RDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCA 151
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSG-EESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+AC +L R + V+ G +G +D+ VG +LIDM+ + G + ++F
Sbjct: 152 AAHAC---FPGELFRSSGGTVL--GFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVF 206
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+VER V W MI Q G +A+ LF ML G +PD TM ++ AC+ G
Sbjct: 207 NGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAG 266
Query: 510 EGRKYFS 516
G++ S
Sbjct: 267 LGQQLHS 273
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 403 LGRQAHTHVVKHGLRFLSGE--ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVS 459
LGR H R L E ++D V NSL+ MY KCG V R+F+ M RD VS
Sbjct: 61 LGRALHR-------RLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVS 113
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W AM +NG EAL L +ML G +P+ T LCA +HA G + SS
Sbjct: 114 WTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFT----LCAAAHACF--PGELFRSSGG 167
Query: 520 KEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
G A + ++D+ R G L A+ + + ++ V+W
Sbjct: 168 TVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGL-VERTVVVW 217
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 307/522 (58%), Gaps = 39/522 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S ++ACA S + +H+ LS+SR + D ++ ++LI MY KCG VS AR VFDG+
Sbjct: 65 YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++VSW LIT Y QN ++AL + M+ + P T S + A + G Q
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ 184
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+HA ++ L D+ +G+AL+DMYA+C +++ A VFD +
Sbjct: 185 MHALAVKY-NLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD------------------ 225
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+N VSWNALIAG+ + G+ E L F ++R TH+T+ ++ +
Sbjct: 226 -------------SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFS 272
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A A + L+ GR H H++K SG++ FV N+++ MY K GS+ D ++F+ +
Sbjct: 273 ALARIGALEQGRWVHAHMIK------SGQKLTAFVANTILGMYAKSGSMVDARKVFDRVD 326
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+RD V+WN M+ AQ G G EA+ F+++ G + + +T + VL ACSH GLV+EG++
Sbjct: 327 QRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQ 386
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M K++ + P DHY VDLLGRAG L EA + MPM+P A +WG+LL AC++H
Sbjct: 387 YFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N +G+Y A + E++P ++GP VLL N+YA G+W + RVRK+M+ GV K+P CSW
Sbjct: 446 KNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSW 505
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+EI V++F+ D HP ++EIY + + + +K+ GYVPN
Sbjct: 506 VEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPN 547
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 217/461 (47%), Gaps = 75/461 (16%)
Query: 10 IVGDLAFLDSSP--FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ G+LA +P + ++ +C +SK+++ R +H+ + +S+ A + F+ N LI +Y KC
Sbjct: 54 LTGELA---PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKC 110
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + DA +F +P RD SW +++G+A
Sbjct: 111 -------------------------------GAVSDARHVFDGIPTRDVVSWTYLITGYA 139
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+D +EALG M F S ++F S L A +G Q+HAL K DVY
Sbjct: 140 QNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVY 199
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+GSAL+DMY +C ++ A RVFD + +N VSWN+LI + + G L F M +G
Sbjct: 200 VGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNG 259
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
T +SV SA A + A ++G +HA +++ + V N ++ MYAK G + +A
Sbjct: 260 FGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFV-ANTILGMYAKSGSMVDA 318
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFDR+ R++V +WN ++ + Q G +
Sbjct: 319 RKVFDRVDQRDLV-------------------------------TWNTMLTAFAQYGLGK 347
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ F +++ + TF ++L AC++ ++ G+Q + + + E D +
Sbjct: 348 EAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVE----PEIDHY 403
Query: 428 VGNSLIDMYMKCGSVEDG-CRIFETMVERDWVSWNAMIVGC 467
V S +D+ + G +++ +F+ +E W A++ C
Sbjct: 404 V--SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 442
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 22/249 (8%)
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
LL + PT + +++ ACA +L R H+H+ + L D F+ NSLI
Sbjct: 52 LLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRL------AGDGFLLNSLIH 105
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG+V D +F+ + RD VSW +I G AQN EALGL ML +P T
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165
Query: 495 MIGVL---CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKT 549
L AC G+ E+ +++ ++ L +D Y + ++D+ R +D A
Sbjct: 166 FTSFLKAAGACGGRGIGEQ----MHALAVKYNLD--EDVYVGSALLDMYARCQQMDMAIR 219
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP-YVLLSNMYAELG 608
+ + + + + V W +L+A + GE K E++ + G + S++++ L
Sbjct: 220 VFDWLDSK-NEVSWNALIAGFARKGD---GETTLMKFAEMQRNGFGATHFTYSSVFSALA 275
Query: 609 RWGEVVRVR 617
R G + + R
Sbjct: 276 RIGALEQGR 284
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/652 (33%), Positives = 348/652 (53%), Gaps = 67/652 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF-DKMSNKN 84
L + K++S + +H+ ++ + F + LI++Y+KC + A +F D N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
VF +N+II+G + GF PE E ++ KM +
Sbjct: 104 VFAFNAIISGFITNGF-----------PE--------------------EGFEFYQKMRN 132
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E +++F A+ AC ++ K ++H LL K DV++GSAL++ Y K G +
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A+ F+ + R++V WN+++ Y Q G LE F RM + P T+ V+S A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ G IH M+ + + + N+L+DMY KC +C+ D + I
Sbjct: 250 MGDLNNGRIIHGFAMKM-GYDSGVAVSNSLIDMYGKC------KCIEDALEI-------- 294
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
F M E+++ SWN++++ + Q G+++ L L + + P
Sbjct: 295 -----------------FEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T +L AC++LA L GR+ H +++ GL + D+ + N++IDMY KCGS+ D
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+FE M +D SWN MI+G +GYG EAL +F +M KPD VT +GVL ACSH
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
AG V +GR + M ++ +AP +HYTC++D+LGRAG LDEA L MP++ + V+W
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LLAAC++H++ +L E A+++ E+EP + G YVL+SN+Y +GR+ EV+ VR MR++
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
V K PGCSWIE+ V+VF+ D+ HP IY L LT ++ GYVP+
Sbjct: 578 VRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA------SEIF 55
T R + +++G D +L +C ++ R +H +I S ++
Sbjct: 321 GTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVL 380
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
++N +ID+YAKCG + A VF++MSNK+V +WN +I
Sbjct: 381 LKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM---------------------- 418
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
G+ H +EAL F +M E +F LSAC+ + G
Sbjct: 419 ---------GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 176 LLSKSRY--SSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
+ KS+Y + + + +IDM G+ G++ A + M E N V W +L+
Sbjct: 470 QM-KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/564 (38%), Positives = 320/564 (56%), Gaps = 8/564 (1%)
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD 166
+F + + D+ +N++ + D EAL M +E++ + AC +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
+ VH + K + V++ +AL+ Y G + +RR FD M RN+VSWNS+I
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y Q G +A +F M G DE TLAS++ AC+ + G +H LM
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHC-LMLVSGSPV 179
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
DL+LG ALVDMY+KCG L AR F+ MPI++VVS TSM+ K SV +AR F M
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMP 239
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ERN VSWN +I+ Y Q G+ EAL L++ ++ P T +L+AC + DL +G+
Sbjct: 240 ERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKM 299
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H ++ + DI + NSL+DMY KCG V+ R+F M R+ VSWN +I G
Sbjct: 300 VHLYIRD------NIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGG 353
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A +G +A+ F+ M+ PD +T + +L +CSH GL+E G+ YF SM + +
Sbjct: 354 LAMHGRALDAITFFRSMVR-NTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKH 412
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+HY CMVDLLGR G L++A LI+ MPM+PD V+WG+LL AC++H N+ +G+ V K+L
Sbjct: 413 EVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQL 472
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
LE+E + G +VL+SN+ E +W ++ R+RKLM++RG K G S IEI ++ F V+
Sbjct: 473 LELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVE 532
Query: 647 DKRHPLNKEIYLVLKMLTREMKRV 670
D RH + EIY V+ L+ + V
Sbjct: 533 DIRHESSSEIYAVVDQLSYHLISV 556
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 219/502 (43%), Gaps = 115/502 (22%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF ++ +C R+++ + VH +K F ++F+ N L+ YA G L
Sbjct: 49 PF--VVKACTRAQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSL---------- 96
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
D+ R F M R+ SWNSM+ G+AQ EA F
Sbjct: 97 ---------------------GDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFG 135
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + F E++ S L AC+ + + G VH L+ S D+ +G AL+DMY KCG
Sbjct: 136 EMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCG 195
Query: 201 RVSCARRV-------------------------------FDGMRERNIVSWNSLITCYEQ 229
+ ARR FD M ERN VSWN++I+CY Q
Sbjct: 196 DLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQ 255
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-DL 288
G +AL+++ +M + G PDE TL V+SAC + G +H + + + N D+
Sbjct: 256 RGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIR--DNIHNPDI 313
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
L N+L+DMYAKCG+++ A +F M RNV
Sbjct: 314 SLINSLLDMYAKCGQVDTAIRLFREMCNRNV----------------------------- 344
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ-- 406
VSWN +I G +G +A+ FR + R + P TF LL++C++ L+ G+
Sbjct: 345 --VSWNVIIGGLAMHGRALDAITFFRSMVRNT-SPDGITFVALLSSCSHGGLLETGQHYF 401
Query: 407 ---AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG-CRIFETMVERDWVSWNA 462
H + VKH + + ++D+ + G +E C I E ++ D V W A
Sbjct: 402 ESMRHVYNVKHEVEHYA----------CMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGA 451
Query: 463 MIVGCAQNGYGTEALGLFKKML 484
++ C +G + K++L
Sbjct: 452 LLGACRIHGNVKIGKQVIKQLL 473
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 176/336 (52%), Gaps = 2/336 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A LL +C + ++ R VH ++ S ++ + L+D+Y+KCG L AR+ F
Sbjct: 145 DEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCF 204
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M K+V +W S++ K G +D A F MPER+ SWN+M+S + Q ++ EAL
Sbjct: 205 EMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALD 264
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M S A E + LSAC D +G VH + + ++ D+ + ++L+DMY
Sbjct: 265 LYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYA 324
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V A R+F M RN+VSWN +I +G A DA+ F R M PD +T +
Sbjct: 325 KCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAI-TFFRSMVRNTSPDGITFVA 383
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S+C+ + G + +++++ +VD+ + G L +A C+ MP++
Sbjct: 384 LLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK 443
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
+VV +++ +VK + + ++LE +S
Sbjct: 444 PDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGIS 479
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 319/538 (59%), Gaps = 45/538 (8%)
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+ + +A++AC G QVHA + +RY V++G+ L+ MY +CG + AR V D
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ER++VSW ++I+ Y Q +AL++F++M+ +G P+E TLA+V+++C+ + +G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+H+ L++ + + +G++L+DMYAK
Sbjct: 131 KQVHSLLVKT-NFESHMFVGSSLLDMYAK------------------------------- 158
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ +++ AR +F + ER+VVS A+I+GY Q G +EEAL LFR L E + H TF L
Sbjct: 159 SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL 218
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ A + LA L G+Q H +++ L F + + NSLIDMY KCG + R+F+
Sbjct: 219 VTALSGLASLDYGKQVHALILRKELPFF------VALQNSLIDMYSKCGKLLYSRRVFDN 272
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ER VSWNAM++G ++G G E + LFK L KPD VT++ VL CSH GLV+EG
Sbjct: 273 MLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEG 331
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
F ++ KE HY C++DLLGR+G L++A LIE MP + IWGSLL AC+
Sbjct: 332 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACR 391
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH N+ +GE VA+KLLE+EP N+G YV+LSN+YA G W +V +VRKLM ++ V K+PG
Sbjct: 392 VHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQ 451
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
SWI + ++ F ++ HP K+I +K + ++K G+VP+ S DDE E
Sbjct: 452 SWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKE 509
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 223/443 (50%), Gaps = 70/443 (15%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ +C+ +++ + R+VHAR+I +++ +F+ RL+ +Y +CG L
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGAL--------------- 61
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
DDA + MPER SW +M+SG++Q +R EAL F+KM
Sbjct: 62 ----------------DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 105
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+EY+ + L++C+G G QVH+LL K+ + S +++GS+L+DMY K + A
Sbjct: 106 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 165
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
RRVFD + ER++VS ++I+ Y Q G +AL++F ++ + G++ + VT ++V+A + L
Sbjct: 166 RRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGL 225
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A+ G Q+HA ++R E L + L N+L+DMY+KCGKL +R VFD M R+VV
Sbjct: 226 ASLDYGKQVHALILRKE-LPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVV----- 279
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
SWNA++ GY ++G E + LF+ L +E V P
Sbjct: 280 --------------------------SWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 312
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +L+ C++ + G VVK L +ID+ + G +E
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHY-----GCIIDLLGRSGRLEKA 367
Query: 446 CRIFETM-VERDWVSWNAMIVGC 467
+ E M E W +++ C
Sbjct: 368 LNLIENMPFESTPSIWGSLLGAC 390
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 171/327 (52%), Gaps = 33/327 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L SC +S+ ++VH+ ++K+ F S +F+ + L+D+YAK
Sbjct: 114 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK--------------- 158
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++N I +A R+F ++PERD S +++SG+AQ EAL F +
Sbjct: 159 SEN----------------IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 202
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
++SE + +F + ++A +G G QVHAL+ + V + ++LIDMY KCG+
Sbjct: 203 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 262
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RRVFD M ER++VSWN+++ Y ++G + + +F + + ++PD VTL +V+S
Sbjct: 263 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSG 321
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ EGL I +++ + ++D+ + G+L +A + + MP + S
Sbjct: 322 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 381
Query: 322 ETSMVSGYAKA-SSVKSARLMFTKMLE 347
+ G + ++V L+ K+LE
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLE 408
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 338/593 (56%), Gaps = 14/593 (2%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF WN++++ L+ G +++A LF M RD SWN++++G+A + +S+AL F ++
Sbjct: 270 DVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELL 329
Query: 144 SENFALSE-YSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGR 201
+ + + + + ACA S + +G +H +L D +G+AL+ Y KC
Sbjct: 330 TLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDD 389
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A F + R+++SWNS++ ++G + LE+ M++ G PD VT+ SVV
Sbjct: 390 IEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHF 449
Query: 262 CASLAAFKEGLQIHARLMR----CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-I 316
C ++ + + H+ +R K + +GNA++D YAKCG + A VF +
Sbjct: 450 CVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSEN 509
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN+V+ +++SGY + A + F +M ++ WN ++ Y +N + +ALGLF L
Sbjct: 510 RNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHEL 569
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P T +LL ACA +A +QL +Q H + ++ D+ + +L D+Y
Sbjct: 570 QAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCF-------GDLHLDGALQDVY 622
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+ ++F+ + +D + + AMI G A +G G EALG F M+ G KPDHV +
Sbjct: 623 AKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIIT 682
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL ACSHAGLV+EG F S+ K HG+ + Y+C+VDLL R G +D+A +++ MP+
Sbjct: 683 TVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPI 742
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ +A IWG+LL AC+ H + LG +VA +L +IE N G YV+LSN+YA RW V+ +
Sbjct: 743 EANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIGNYVVLSNLYAADARWDGVMEI 802
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
RKLMR R + K GCSWIE+ NVF+ D HP +IY +L L ++K
Sbjct: 803 RKLMRTRDLKKPAGCSWIEVERRKNVFVAGDTSHPHRIDIYRILSTLNGQIKE 855
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 263/564 (46%), Gaps = 77/564 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L SC ++ R +H I++ S + L+++YAKCG L ++K+F
Sbjct: 23 DYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLF 82
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF-SEAL 136
++ + N +RD WN ++SG+A + +E L
Sbjct: 83 GEIGSCN----------------------------DRDPIFWNILLSGYAGSRVYDAETL 114
Query: 137 GYFVKMHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F +MH N+ S + L CA D MG V+ KS + G+AL+ M
Sbjct: 115 RLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSM 174
Query: 196 YGKCGRV-SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y KCG V A FD + E+++VSWN++I+ + +N DA +F M+ I+P+ T
Sbjct: 175 YAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTT 234
Query: 255 LASVVSACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
LA+++ CAS A+ G +IH ++R +L D+ + NALV Y + G++ EA +F
Sbjct: 235 LANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLF 294
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
RM +R++VS ++++GYA NGE +AL
Sbjct: 295 RRMELRDLVSWNAIIAGYA-------------------------------SNGEWSKALE 323
Query: 372 LFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF LL + + P T ++ ACA +L +G+ H +V++H L D VGN
Sbjct: 324 LFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLC-----EDTSVGN 378
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y KC +E F + RD +SWN+M+ ++GY T L L + ML G P
Sbjct: 379 ALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTP 438
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-----TCMVDLLGRAGCLD 545
D VT++ V+ C + L E+ K S S H L K ++D + G ++
Sbjct: 439 DSVTILSVVHFCVNV-LKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIE 497
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAA 569
A + +++ + V + ++++
Sbjct: 498 YASKVFQSLSENRNLVTFKAIISG 521
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 160/306 (52%), Gaps = 7/306 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHA-----RIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
DS ++ C+ + H+ R++ S+F E I N ++D YAKCG +
Sbjct: 439 DSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEY 498
Query: 73 ARKVFDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A KVF +S N+N+ T+ +II+G + G +D+A F MP D WN MV +A++D
Sbjct: 499 ASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDC 558
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
S+ALG F ++ + + S L ACA ++ Q H +S + D+++ A
Sbjct: 559 SSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCF-GDLHLDGA 617
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L D+Y KCG + A ++F + ++++ + ++I Y +G +AL F M+ GI+PD
Sbjct: 618 LQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPD 677
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
V + +V+SAC+ EGL I + + ++ + + +VD+ A+ G++++A +
Sbjct: 678 HVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMV 737
Query: 312 DRMPIR 317
MPI
Sbjct: 738 TGMPIE 743
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+F + S L +CAG K G +H + + + S + AL++MY KCG + +
Sbjct: 19 DFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDES 78
Query: 206 RRVFDGM---RERNIVSWNSLITCYEQNGPA-SDALEVFVRMMASGI-EPDEVTLASVVS 260
+++F + +R+ + WN L++ Y + ++ L +F M + +P VT A V+
Sbjct: 79 KKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLP 138
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL-NEARCVFDRMPIRNV 319
CA L G ++ ++ L + GNALV MYAKCG + +A FD +
Sbjct: 139 VCARLGDVYMGRSVNCYAIK-SGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSID---- 193
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
E++VVSWNA+I+G+ +N E+A LF + +
Sbjct: 194 ---------------------------EKDVVSWNAIISGFAENNLMEDAFRLFSSMLKG 226
Query: 380 SVCPTHYTFGNLLNACANLADL---QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P + T N+L CA+ + G++ H +V++H +D+FV N+L+ Y
Sbjct: 227 QIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELL-----ADVFVWNALVSFY 281
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTM 495
++ G VE+ +F M RD VSWNA+I G A NG ++AL LF ++L L +PD VT+
Sbjct: 282 LRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTL 341
Query: 496 IGVLCACSHAGLVEEGR 512
+ ++ AC+ + + G+
Sbjct: 342 LCIIPACAQSRNLHVGK 358
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 212/467 (45%), Gaps = 54/467 (11%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLY 71
D+ DS ++ +C +S+++ + +H +++ E + N L+ YAKC +
Sbjct: 332 DMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIE 391
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWG----FIDDASRLFASMPERDQCSWNSMVS--- 124
GA + F +S +++ +WNS++ L++ G F++ + + D + S+V
Sbjct: 392 GAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCV 451
Query: 125 GFAQHDRFSEALGYFV--KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+ D+ EA Y + ++ + F + + L A A + + ++V LS++R
Sbjct: 452 NVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENR- 510
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++ A+I Y CG + A F+ M ++ WN ++ Y +N +S AL +F
Sbjct: 511 --NLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHE 568
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+ A GI+PD VT+ S++ ACA +A+ + Q H +R DL L AL D+YAKCG
Sbjct: 569 LQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIR--SCFGDLHLDGALQDVYAKCG 626
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+ A +F +P ++++ T+M+ GYA
Sbjct: 627 SIGYAFKLFQLIPNKDLIIFTAMIRGYA-------------------------------M 655
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSG 421
+G +EALG F + + P H +L+AC++ + G + K HG++
Sbjct: 656 HGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTME 715
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ S ++D+ + G ++D + M +E + W ++ C
Sbjct: 716 QYS------CVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGAC 756
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 162/350 (46%), Gaps = 52/350 (14%)
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
GP A + D +AS++ +CA L+A K G +H ++R + V
Sbjct: 3 GPYLKAWNTMISDCNGDFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAV- 61
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
AL++MYAKCG L+E++ +F + N +R+
Sbjct: 62 SKALLNMYAKCGALDESKKLFGEIGSCN----------------------------DRDP 93
Query: 351 VSWNALIAGYTQNG-ENEEALGLFRLLKRESVC-PTHYTFGNLLNACANLADLQLGRQAH 408
+ WN L++GY + + E L LFR + + P+ T +L CA L D+ +GR +
Sbjct: 94 IFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVN 153
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV-EDGCRIFETMVERDWVSWNAMIVGC 467
+ +K GL ++ GN+L+ MY KCG V +D F+++ E+D VSWNA+I G
Sbjct: 154 CYAIKSGL------DTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGF 207
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE-HGLAP 526
A+N +A LF ML KP++ T+ +L C+ +E Y+ KE HG
Sbjct: 208 AENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCAS---FDEYIAYW--FGKEIHGYVL 262
Query: 527 LKDH-------YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + +V R G ++EA+ L M ++ D V W +++A
Sbjct: 263 RHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELR-DLVSWNAIIAG 311
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/650 (35%), Positives = 351/650 (54%), Gaps = 87/650 (13%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR++ + + R V ++ F ++++ +I YA+ A ++F +M K+V +WN
Sbjct: 6 LRNQRIDEARTVFDKV---SFP-DVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWN 61
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
S+I G + A +LF MPER SW +M++GF Q + A G F KM
Sbjct: 62 SMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM------- 114
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC--GRVSCARR 207
F+ D+ +++I YG C GRV R
Sbjct: 115 ----------------PFR----------------DIAAWNSMI--YGYCCNGRVEDGLR 140
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE--PDEVTLASVVSACASL 265
+F M RN++SW S+I +Q+G + +AL +F +MM G+E P T V++ACA+
Sbjct: 141 LFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANA 200
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+A +G+QIHA + + D + AL+ YA C ++ ++ VF
Sbjct: 201 SALYQGVQIHAHVFKL-GYSFDAYISAALITFYANCKQMEDSLRVFH------------- 246
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
L NVV W AL+ GY N ++E+AL +F + RE V P
Sbjct: 247 ------------------GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQ 288
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+F + LN+C L L GR+ HT VK GL E+D+FVGNSLI MY +CG++ DG
Sbjct: 289 SSFTSALNSCCGLEALDWGREIHTAAVKLGL------ETDVFVGNSLIVMYYRCGNLNDG 342
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
IF+ + +++ VSWN++IVGCAQ+G G AL F +M+ +PD +T G+L ACSH+
Sbjct: 343 VVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHS 402
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G+ ++GR F S+ DHY CMVD+LGR+G L+EA+ LI MP++ ++++W
Sbjct: 403 GMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLV 462
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL+AC +H + + E AK ++++EP S YVLLSN+YA RW +V R+R+ M++RG+
Sbjct: 463 LLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGI 522
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
KQPG SWI I G N F+ D+ HP + IY L+ L ++K +GYVP+
Sbjct: 523 TKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPD 572
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 172/384 (44%), Gaps = 50/384 (13%)
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+IT + +N +A VF ++ PD +++ A F LQ+ E
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSF----PDVYLYTMMITGYARNYRFDHALQLFY-----E 51
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
D+V N+++ C L AR +FD MP R+VVS T+M++G+ + ++ A +F
Sbjct: 52 MPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLF 111
Query: 343 TKMLERNVVSWNALIAGY-------------------------------TQNGENEEALG 371
KM R++ +WN++I GY Q+G +EEALG
Sbjct: 112 YKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALG 171
Query: 372 LFRLLK--RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
LFR + V PT T+ ++ ACAN + L G Q H HV K G F D ++
Sbjct: 172 LFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF------DAYIS 225
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+LI Y C +ED R+F + + V W A++ G N +AL +F +M+ G
Sbjct: 226 AALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL 285
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+ + L +C ++ GR+ ++ K GL ++ + R G L++
Sbjct: 286 PNQSSFTSALNSCCGLEALDWGREIHTAAVKL-GLETDVFVGNSLIVMYYRCGNLNDGVV 344
Query: 550 LIEAMPMQPDAVIWGSLLAACKVH 573
+ + + + + V W S++ C H
Sbjct: 345 IFKRIS-KKNIVSWNSVIVGCAQH 367
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 31/299 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
SS + ++ +C + ++ ++HA + K ++ + +I LI YA C + + +VF
Sbjct: 187 SSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH 246
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ NV W +++T G+ + + +AL
Sbjct: 247 GKLHMNVVIWTALVT-------------------------------GYGLNCKHEDALKV 275
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F +M E ++ SF SAL++C G G ++H K +DV++G++LI MY +
Sbjct: 276 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 335
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG ++ +F + ++NIVSWNS+I Q+G AL F +M+ S +EPDE+T +
Sbjct: 336 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 395
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SAC+ ++G + + L +VD+ + GKL EA + MP++
Sbjct: 396 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVK 454
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S F L+SC +++ R +H +K +++F+ N LI +Y +CG L +F
Sbjct: 287 NQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 346
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++S KN+ +WNS+I G AQH AL
Sbjct: 347 KRISKKNIVSWNSVIVGC-------------------------------AQHGCGMWALA 375
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDM 195
+F +M E +F LSAC+ S + G + S+++ S++V + + ++D+
Sbjct: 376 FFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENK-SAEVKLDHYACMVDI 434
Query: 196 YGKCGRVSCARRVFDGMRER-NIVSWNSLIT 225
G+ G++ A + M + N + W L++
Sbjct: 435 LGRSGKLEEAEELIRNMPVKANSMVWLVLLS 465
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/678 (34%), Positives = 366/678 (53%), Gaps = 69/678 (10%)
Query: 42 HARIIKSQFASEIFIQ--NR-------LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
HAR Q A IF Q NR +I YA+ G + A +VFD+M + ++N++I
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 93 TGLLKWGF-IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-------S 144
T ++K + A LF +PE++ S+ +M++GF + RF EA + + +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N LS Y + +V G V ++S S+++ Y K GR+
Sbjct: 180 SNVLLSGYLRAGKWNE---AVRVFQGMAVKEVVS----------CSSMVHGYCKMGRIVD 226
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACA 263
AR +FD M ERN+++W ++I Y + G D +F+RM G ++ + TLA + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF------------ 311
++EG QIH + R L DL LGN+L+ MY+K G + EA+ VF
Sbjct: 287 DFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 312 -------------------DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++MP +++VS T M+ G++ + +F M E++ ++
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I+ + NG EEAL F + ++ VCP YTF ++L+A A+LADL G Q H VV
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + +D+ V NSL+ MY KCG+ D +IF + E + VS+N MI G + NG+
Sbjct: 466 KMNIV------NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G +AL LF + G++P+ VT + +L AC H G V+ G KYF SM + + P DHY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR+G LD+A LI MP +P + +WGSLL+A K H + L E AKKL+E+EP
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
++ PYV+LS +Y+ +G+ + R+ + + + + K PG SWI + G V+ F+ D+
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN 699
Query: 653 NKEIYLVLKMLTREMKRV 670
+EI LKM+ +EM+ +
Sbjct: 700 LEEIGFTLKMIRKEMELI 717
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 212/456 (46%), Gaps = 54/456 (11%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+ L + S+ ++ ++ I + + G + A +F M R+IVSW ++I+ Y +NG
Sbjct: 36 KTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENG 95
Query: 232 PASDALEVFVRM----------MASGI------------------EPDEVTLASVVSACA 263
S A +VF M M + + E + V+ A++++
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV 155
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
F E ++A K R D V N L+ Y + GK NEA VF M ++ VVS +
Sbjct: 156 RAGRFDEAEFLYAE--TPVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCS 212
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVC 382
SMV GY K + AR +F +M ERNV++W A+I GY + G E+ GLF +++E V
Sbjct: 213 SMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK 272
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T + AC + + G Q H V + L F D+F+GNSL+ MY K G +
Sbjct: 273 VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF------DLFLGNSLMSMYSKLGYM 326
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ +F M +D VSWN++I G Q +EA LF+KM D V+ ++
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGF 382
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAMPMQ--- 557
S G + + + F G+ P KD+ +T M+ G +EA M +
Sbjct: 383 SGKGEISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
P++ + S+L+A +++ G + +++++ N
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ F DS LL LR+ ++ R+ + E+ + ++ Y K G + A
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEA----VRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R +FD+M+ +NV TW ++I G K GF +D LF M +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD----------------- 270
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
VK++S A+ AC V ++ G+Q+H L+S+ D+++G++L+
Sbjct: 271 ------VKVNSNTLAV-------MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM---------- 243
MY K G + A+ VF M+ ++ VSWNSLIT Q S+A E+F +M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 244 MASGI-----------------EPDEVTLASVV--------------------------- 259
M G E D +T +++
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 260 --------SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
SA ASLA EGLQIH R+++ + NDL + N+LV MY KCG N+A +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMN-IVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ N+VS +M+S GY+ NG ++AL
Sbjct: 497 SCISEPNIVSYNTMIS-------------------------------GYSYNGFGKKALK 525
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +L+ P TF LL+AC ++ + LG + + +K G +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYA----C 580
Query: 432 LIDMYMKCGSVEDGCRIFETM 452
++D+ + G ++D + TM
Sbjct: 581 MVDLLGRSGLLDDASNLISTM 601
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 350/667 (52%), Gaps = 78/667 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N++++ L+++G I A R+FA MPERD SWN MV G+ + EAL + +M
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y+F L C G D++MG +VHA + + + +V + +AL+ MY KCG + AR+V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FDGM + +SWN++I + +N LE+F+ M+ + ++P+ +T+ SV A L+
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
++H ++ D+ N+L+ MY G++ +A +F RM ++ +S T+M+SG
Sbjct: 315 GFAKEMHGFAVK-RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 329 YAKAS---------------------------------------SVKSARLMFTKMLERN 349
Y K +K L K R
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVC--------------------------- 382
VV NAL+ Y ++ ++A+ +F+ + + V
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 383 ---PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P TF L+ACA L+ G++ H +V++ G+ S+ +V N+L+D+Y+KC
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI------GSEGYVPNALLDLYVKC 547
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G F E+D VSWN M+ G +G G AL LF +M+ GE PD VT + +L
Sbjct: 548 GQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALL 607
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACS AG+V +G + F M+++ + P HY CMVDLL R G L EA LI MP++PD
Sbjct: 608 CACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPD 667
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL C++HR++ LGE AK +LE+EP++ +VLL ++Y + G+W +V RVRK
Sbjct: 668 AAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKT 727
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
MR++G+ + GCSW+E+ G + F+ D+ HP KEI +VL + MK G+ P S
Sbjct: 728 MREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLE 787
Query: 678 DDEAYEE 684
D E E+
Sbjct: 788 DKEVSED 794
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ M + G + A RVF M ER++ SWN ++ Y + G +AL+++ RM+ +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD T V+ C + ++ G ++HA ++R +++ + NALV MYAKCG + A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRF-GFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFD M + + +S +M++G + +N E E
Sbjct: 252 RKVFDGMAVTDCISWNAMIAG-------------------------------HFENHECE 280
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L LF + V P T ++ A L+++ ++ H VK G D+
Sbjct: 281 AGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI------DVA 334
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSLI MY G + D +IF M +D +SW AMI G +NG+ +AL ++ M L
Sbjct: 335 FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHN 394
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT+ L AC+ G ++ G K +++ G ++++ ++ +D+A
Sbjct: 395 VSPDDVTIASALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 453
Query: 548 KTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSN 593
+ + M + D V W S++A C HR+ Y L ++P++
Sbjct: 454 IEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNS 499
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 203/458 (44%), Gaps = 77/458 (16%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
V + +H +K FA ++ N LI +Y G + A K+F +M K+ +W ++I+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
K GF D A ++A M ++H N + + +
Sbjct: 374 YEKNGFPDKALEVYALM-----------------------------ELH--NVSPDDVTI 402
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
SAL+ACA +G ++H L + V + +AL++MY K + A VF M E
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+++VSW+S+I + N + +AL F R M ++P+ VT + +SACA+ A + G +I
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYF-RYMLGHVKPNSVTFIAALSACAATGALRSGKEI 521
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
HA ++RC + ++ + NAL+D+Y KCG+ + A F ++VVS M+SG+
Sbjct: 522 HAYVLRC-GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGL 580
Query: 335 VKSARLMFTKMLE----RNVVSWNALIAGYTQNGENEEALGLFR---------------- 374
A +F +M+E + V++ AL+ ++ G + LF
Sbjct: 581 GDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYA 640
Query: 375 -----------------LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
L+ R + P +G LLN C ++LG A +
Sbjct: 641 CMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVI------ 694
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
L E +D+ L D+Y G R+ +TM E+
Sbjct: 695 -LELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 44/322 (13%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PDE ++ C A G++ AR E L LGNA++ M + G++ A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACAR-ADAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF +MP R+V S MV GY K G EEA
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKV-------------------------------GFLEEA 181
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L L+ + + P YTF +L C + D ++GR+ H HV LRF G+E D+
Sbjct: 182 LDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV----LRFGFGDEVDVL-- 235
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+ MY KCG + ++F+ M D +SWNAMI G +N L LF ML +
Sbjct: 236 NALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295
Query: 490 PDHVTMIGVLCACSHAGLVEE--GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
P+ +T+ V A +G++ E K + + G A ++ + G + +A
Sbjct: 296 PNLMTITSVTVA---SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDA 352
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
+ M + DA+ W ++++
Sbjct: 353 GKIFSRMETK-DAMSWTAMISG 373
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F L +C + ++ + +HA +++ SE ++ N L+D+Y KCG A F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
S K+V +WN +++G + G D A LF M E
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 593
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/606 (36%), Positives = 334/606 (55%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M G A AL +V M S + Y+F L +CA
Sbjct: 41 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S F+ G Q+H + K Y D+Y+ ++LI MY + GR+ AR+VFD R++VS
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
WN++I+ Y + G +ALE+F MM + + PDE
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ SVVSACA A+ + G Q+H+ + ++L + NAL+D+Y KCG+
Sbjct: 221 STMVSVVSACAQSASIELGRQVHS-WIDDHGFGSNLKIVNALIDLYIKCGE--------- 270
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V++A +F + ++V+SWN LI GYT +EAL L
Sbjct: 271 ----------------------VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 308
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L +++GR H ++ K L G + SL
Sbjct: 309 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR----LKGVANASSHRTSL 364
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F++++ R SWNAMI G A +G A +F +M +PD
Sbjct: 365 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSH+G+++ GR F SM +++ + P +HY CM+DLLG +G EA+ +I
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 484
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
M M+PD VIW SLL ACK+H N+ LGE A+ L++IEP N G YVLLSN+YA GRW E
Sbjct: 485 TMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 544
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V ++R L+ +G+ K PGCS IEI V+ F++ DK HP N+EIY +L+ + ++ G+
Sbjct: 545 VAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGF 604
Query: 673 VPNASD 678
VP+ S+
Sbjct: 605 VPDTSE 610
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC +SK+ + +++H ++K + ++++ LI +Y + G L ARKVFD+ S
Sbjct: 91 FPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSS 150
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V ++ ++ITG G+I A ++F +P +D SWN+M+SG+A+ EAL F +
Sbjct: 151 HRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKE 210
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N E + S +SACA S ++G QVH+ + + S++ + +ALID+Y KCG
Sbjct: 211 MMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE 270
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A +F+G+ ++++SWN+LI Y +AL +F M+ SG P++VT+ S++ A
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPA 330
Query: 262 CASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
CA L A + G IH + R + + N +L+DMYAKCG + A+ VFD + R++
Sbjct: 331 CAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLS 390
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S +M+ G+A +G A +F +++
Sbjct: 391 SWNAMIFGFA-------------------------------MHGRANAAFDIFSRMRKNE 419
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF LL+AC++ L LGR +K + E +ID+ G
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIF-RSMKEDYKITPKLEH----YGCMIDLLGHSG 474
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
++ + TM +E D V W +++ C +G
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 506
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 33/299 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S ++ +C +S S+ R+VH+ I F S + I N LID+Y KCG + A +F
Sbjct: 219 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 278
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +S K+V +WN++I G+ + + EAL
Sbjct: 279 EGLSYKDVISWNTLI-------------------------------GGYTHMNLYKEALL 307
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALIDM 195
F +M + ++ + S L ACA ++G +H ++K ++ ++LIDM
Sbjct: 308 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 367
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + A++VFD + R++ SWN++I + +G A+ A ++F RM + IEPD++T
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 427
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
++SAC+ G I + K+ L ++D+ G EA + + M
Sbjct: 428 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 486
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/522 (37%), Positives = 314/522 (60%), Gaps = 39/522 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + ++ACA S + + +VHA L+ SR++ D ++ ++LI +Y KCG V AR+VFD MR
Sbjct: 54 YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+++VSW SLI Y QN +A+ + M+ +P+ T AS++ A + A G Q
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IHA ++C+ D+ +G+AL+DMYA+CG ++ A VFD
Sbjct: 174 IHALAVKCD-WHEDVYVGSALLDMYARCGMMDMATAVFD--------------------- 211
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
K+ +N VSWNALI+G+ + G+ E AL F + R TH+T+ ++ +
Sbjct: 212 ----------KLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
+ A L L+ G+ H H++K S ++ F GN+L+DMY K GS+ D ++F+ +
Sbjct: 262 SIARLGALEQGKWVHAHMIK------SRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVD 315
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++D V+WN M+ AQ G G EA+ F++M G + VT + +L ACSH GLV+EG++
Sbjct: 316 DKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKR 375
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF M KE+ L P DH+ +V LLGRAG L+ A I MP++P A +WG+LLAAC++H
Sbjct: 376 YFEMM-KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMH 434
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N +G++ A + E++P +SGP VLL N+YA G+W RVR++M+ GV K+P CSW
Sbjct: 435 KNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSW 494
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+E+ V++F+ D HP +EIY + +++++++ GYVP+
Sbjct: 495 VEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPD 536
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 222/466 (47%), Gaps = 77/466 (16%)
Query: 10 IVGDLAFLDSSPFAK-------LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
++ DL LD+ A + +C +SK++ D R+VHA + S+FA + F+ N LI
Sbjct: 35 VLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIH 94
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KCG + ARKV F M +D SW S+
Sbjct: 95 LYCKCGSVLEARKV-------------------------------FDEMRRKDMVSWTSL 123
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++G+AQ+D EA+G M F + ++F S L A D +G Q+HAL K +
Sbjct: 124 IAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDW 183
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
DVY+GSAL+DMY +CG + A VFD + +N VSWN+LI+ + + G AL F
Sbjct: 184 HEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAE 243
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ +G E T +SV S+ A L A ++G +HA +++ + + GN L+DMYAK G
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQ-KMTAFAGNTLLDMYAKSG 302
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+ +AR VFDR+ +++V +WN ++ + Q
Sbjct: 303 SMIDARKVFDRVDDKDLV-------------------------------TWNTMLTAFAQ 331
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G +EA+ F +++ + TF +L AC++ ++ G++ + ++ L
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLE----P 387
Query: 423 ESDIFVGNSLIDMYMKCGSVEDG-CRIFETMVERDWVSWNAMIVGC 467
E D FV +++ + + G + IF+ +E W A++ C
Sbjct: 388 EIDHFV--TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAAC 431
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
LL + PT + + ACA +L+ R+ H H+ RF D F+ NSLI
Sbjct: 41 LLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASS--RF----AGDAFLDNSLIH 94
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
+Y KCGSV + ++F+ M +D VSW ++I G AQN EA+GL ML KP+ T
Sbjct: 95 LYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFT 154
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY------TCMVDLLGRAGCLDEAK 548
+L A GR+ H LA D + + ++D+ R G +D A
Sbjct: 155 FASLLKAAGAHADSGIGRQI-------HALAVKCDWHEDVYVGSALLDMYARCGMMDMAT 207
Query: 549 TLIEAMPMQPDAVIWGSLLA 568
+ + + + + V W +L++
Sbjct: 208 AVFDKLDSK-NGVSWNALIS 226
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/653 (34%), Positives = 344/653 (52%), Gaps = 68/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C S ++VH IK+ +F+ N +D+Y+K
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSK----------- 473
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+G I DA LF+ +P +D SWN++ G AQ+ EA+
Sbjct: 474 --------------------YGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M + SF +A++AC+ + G Q+H L K S+ +GS+LID+Y
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V +R++F + +IV N+LI + QN +A+++F +++ G++P VT +S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++S C+ G Q+H ++ L +D +LG +L +Y K L +A + MP
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD- 692
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+N+ W A+I+GY QNG + +L F ++
Sbjct: 693 -----------------------------HKNLFEWTAIISGYAQNGYGDHSLVSFWRMR 723
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+V TF ++L AC+++ G++ H + K G F S E + ++LIDMY
Sbjct: 724 HCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSG--FGSYETAT----SALIDMYS 777
Query: 438 KCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG V F+ + + D + WN+MIVG A+NGY EAL LF+KM KPD VT +
Sbjct: 778 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC+H+GL+ EGR +F M K +GL P DHY C +DLLGR G L EA+ I+ +P
Sbjct: 838 GVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD V+W + LAAC++H++ G+ A+KL+E+EP S YVLLS+++A G W E
Sbjct: 898 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R+ MR++GV K PGCSWI + ++F+V+DK HP N IY +L LT MK+
Sbjct: 958 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1010
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 178/593 (30%), Positives = 282/593 (47%), Gaps = 87/593 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C R ++ R+VH ++KS F+S +F + L+D+YAKCG + AR+VF
Sbjct: 157 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 216
Query: 78 DKMSNKNVFTWNS-----------------------------------IITGLLKWGFID 102
D ++ + W+S II+ L G +D
Sbjct: 217 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLD 276
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A+ L MP +WN+++SG AQ LG + M S + +F S LSA A
Sbjct: 277 HATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA 336
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
F G Q+HA ++V++GS+LI++Y KCG S A+ VFD E+NIV WN+
Sbjct: 337 NMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNA 396
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
++T + QN +A+ +F MM ++ DE T S++ AC L++F G Q+H C
Sbjct: 397 MLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVH-----CV 451
Query: 283 KLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++N L + NA +DMY+K G + +A+ +F +P
Sbjct: 452 TIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY---------------------- 489
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
++ +SWNAL G QN E EEA+ + + ++ + P +F +NAC+N+
Sbjct: 490 ---------KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ G+Q H +K+G+ S+ VG+SLID+Y K G VE +IF + V
Sbjct: 541 RATETGKQIHCLAIKYGIC------SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIV 594
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
NA+I G QN EA+ LF+++L G KP VT +L CS + G++
Sbjct: 595 PINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYT 654
Query: 519 SKEHGLAPLKDHYTCMVDLLG---RAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K L D V L G ++ L++A L+ MP + W ++++
Sbjct: 655 LKS---GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 56/496 (11%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGT 171
ER + +S++S A+ + LG F + + ++ LSAC+ G
Sbjct: 119 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 178
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
QVH + KS +SS V+ +AL+DMY KCG V ARRVFDG+ + + W+S+I CY + G
Sbjct: 179 QVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVG 238
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+AL +F RM G PD+VTL +++S AS G HA + + V
Sbjct: 239 CYQEALALFSRMDKMGSAPDQVTLVTIISTLAS-----SGRLDHATALLKKMPTPSTVAW 293
Query: 292 NALVDMYAKCGKLNEARCVFDRM------PIR---------------------------- 317
NA++ +A+ G ++ M P R
Sbjct: 294 NAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVM 353
Query: 318 -----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
NV +S+++ YAK A+ +F E+N+V WNA++ G+ QN EEA+ +
Sbjct: 354 HGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRM 413
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R ++ +TF ++L AC L+ LG+Q H +K+ + + +FV N+
Sbjct: 414 FQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM------DISLFVANAT 467
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY K G++ D +F + +D +SWNA+ VG AQN EA+ + K+M L G PD
Sbjct: 468 LDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDD 527
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL-- 550
V+ + ACS+ E G++ ++ ++G+ + ++DL + G ++ ++ +
Sbjct: 528 VSFSTAINACSNIRATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFA 586
Query: 551 -IEAMPMQP-DAVIWG 564
++A + P +A+I G
Sbjct: 587 QVDASSIVPINALIAG 602
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 209/428 (48%), Gaps = 71/428 (16%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF--VRMMA 245
+G +L+++Y K GRV A ER + +SL++C+ ++G D L F +R A
Sbjct: 93 LGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTA 152
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G PD+ LA V+SAC+ + G Q+H +++ + + ALVDMYAKCG +
Sbjct: 153 GG-RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVK-SGFSSSVFCEAALVDMYAKCGDVP 210
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT---------------------- 343
AR VFD + + + +SM++ Y + + A +F+
Sbjct: 211 NARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA 270
Query: 344 -------------KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
KM + V+WNA+I+G+ Q+G LGL++ ++ + PT TF +
Sbjct: 271 SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFAS 330
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+A AN+ G+Q H V HGL ++++FVG+SLI++Y KCG D +F+
Sbjct: 331 MLSAAANMKAFVEGQQMHAAAVMHGL------DANVFVGSSLINLYAKCGCPSDAKNVFD 384
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
E++ V WNAM+ G QN EA+ +F+ M+ + D T + +L AC+
Sbjct: 385 LSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACT------- 437
Query: 511 GRKYFSS--MSKEHGLAPLKDHYTCM----------VDLLGRAGCLDEAKTLIEAMPMQP 558
Y SS + K+ +K+ CM +D+ + G + +AK L +P +
Sbjct: 438 ---YLSSFYLGKQVHCVTIKN---CMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK- 490
Query: 559 DAVIWGSL 566
D++ W +L
Sbjct: 491 DSISWNAL 498
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 34/313 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAK 66
+Q++ D S F+ +L C S + + ++VH +KS + + L +Y K
Sbjct: 617 QQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLK 676
Query: 67 CGCLYGARKVFDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
L A K+ +M + KN+F W +II+G + G+ D +S+VS
Sbjct: 677 SKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGD-----------------HSLVS- 718
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
F +M N E +F S L AC+ F G ++H L++KS + S
Sbjct: 719 -------------FWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSY 765
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMM 244
SALIDMY KCG V + F ++ + +I+ WNS+I + +NG A +AL +F +M
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKME 825
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
I+PDEVT V+ AC EG + + L L +D+ + G L
Sbjct: 826 ELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHL 885
Query: 305 NEARCVFDRMPIR 317
EA+ D++P R
Sbjct: 886 QEAQEAIDQLPFR 898
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R + T HG G +G+SL+++Y K G V ER + ++++
Sbjct: 70 RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLL 129
Query: 465 VGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
A++G + LG F+ + G +PD + VL ACS G++ GR+ + K G
Sbjct: 130 SCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS-G 188
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ +VD+ + G + A+ + + + PD + W S++A
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PDTICWSSMIA 232
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/678 (35%), Positives = 352/678 (51%), Gaps = 103/678 (15%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD-- 115
N +I VYAK G + AR +FDKM +N+ +WN++++G L G D+A +LF MP RD
Sbjct: 10 NSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLF 69
Query: 116 -------------------------QCS-------WNSMVSGFAQHDRFSEALGYFVKMH 143
CS WN+M+SG+ + R +EA F +M
Sbjct: 70 SWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMP 129
Query: 144 SENFALSEYSFGSALSACAGSVDFKMG----------------------TQVHALLSKSR 181
+N S+ S L+ + ++G QV L S +
Sbjct: 130 VKNL----ISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDSAWK 185
Query: 182 Y-----SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ +V ++ + + G + +RR+FD M RNIVSWN++I+ Y Q +A
Sbjct: 186 FFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEA 245
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL---------------MRC 281
+F M E D V+ ++++ + E ++ + ++C
Sbjct: 246 SRLFEEM----PERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQC 301
Query: 282 EKLRN-----------DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
K+ D+V NA++ YA G++NEA C+ RM +++V+ +M+S YA
Sbjct: 302 NKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMISCYA 361
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
+ + A +F +M ER++VSWN+LIAG+ NG+N +AL F L+ E P +F
Sbjct: 362 QVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFAC 421
Query: 391 LLNACANLADLQLGRQAHTHVVKHG-LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
L++CA +A LQ+G Q H VVK G L +L V N+LI MY KCG + + +F
Sbjct: 422 GLSSCATIAALQVGNQLHQVVVKGGYLNYL-------VVNNALITMYAKCGRILEAGLVF 474
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ D +SWN++I G A NGYG EAL LF++M G PD VT IG+L AC+HAG+V+
Sbjct: 475 NGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVD 534
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G K F MSK + + PL +HY CMVDLLGR G LDEA ++ M ++ A +WG+LL A
Sbjct: 535 HGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGA 594
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+ H N+ LG A KL E EP + YVLLSN++AE RW EV VR LM VK+P
Sbjct: 595 CRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTVKEP 654
Query: 630 GCSWIEILGHVNVFMVKD 647
GCSW+E+ V+ F+ D
Sbjct: 655 GCSWVEVRNQVHGFLSDD 672
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 233/492 (47%), Gaps = 67/492 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L R+ ++ ++RR+ ++ S N +I Y + + A ++F++M
Sbjct: 198 WVTMLSGFARNGNILESRRLFDQMPSRNIVS----WNAMISAYVQRCEIDEASRLFEEMP 253
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ +W ++I G ++ G +D+A L MP R+ + +M+SG+ Q ++ EA +F +
Sbjct: 254 ERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDE 313
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ + + ++ A A G ++ + LSK + D+ + +I Y + G+
Sbjct: 314 IGTWDVVC--WNAMIAGYAHHGRINEAL------CLSKRMVNKDMVTWNTMISCYAQVGQ 365
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++F+ M ER++VSWNSLI + NG DAL+ F M G +PD+++ A +S+
Sbjct: 366 MDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFACGLSS 425
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA++AA + G Q+H +++ L N LV+ NAL+ MYAKCG++ EA VF+ + +V+S
Sbjct: 426 CATIAALQVGNQLHQVVVKGGYL-NYLVVNNALITMYAKCGRILEAGLVFNGICHADVIS 484
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S++ GYA NG +EAL LF + E +
Sbjct: 485 WNSLIGGYAI-------------------------------NGYGKEALKLFEEMASEGM 513
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL-------ID 434
P TF +L+AC H +V HGL+ S ++ L +D
Sbjct: 514 APDEVTFIGILSAC-----------NHAGMVDHGLKLFKC-MSKVYAIEPLAEHYACMVD 561
Query: 435 MYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
+ + G +++ I M V+ W A++ C +G LG L +P H
Sbjct: 562 LLGRVGRLDEAFEIVRGMKVKATAGVWGALLGAC--RAHGNLELGRLAAHKLSEFEP-HK 618
Query: 494 TMIGVLCACSHA 505
T VL + HA
Sbjct: 619 TSNYVLLSNIHA 630
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 34/320 (10%)
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M +N V+ SM+S YAK + +AR +F KM RN+VSWN +++GY NG+ +EA LF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ R + +++ ++ +++ R+ + + N++I
Sbjct: 61 VIMPRRDL----FSWTLMITCYTRNGEVEKARELFDSLP-------CSYRKGVACWNAMI 109
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
Y+K G V + R+F+ M ++ +SWN+M+ G QN L F +M ++ D V
Sbjct: 110 SGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEM----DERDVV 165
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ ++ G ++ K+F K P + M+ R G + E++ L +
Sbjct: 166 SWNLMVDGFIQVGDLDSAWKFFQETQK-----PNVVSWVTMLSGFARNGNILESRRLFDQ 220
Query: 554 MPMQPDAVIWGSLLAA----CKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYAELG 608
MP + + V W ++++A C++ A +L E P +S + + N Y +G
Sbjct: 221 MPSR-NIVSWNAMISAYVQRCEIDE--------ASRLFEEMPERDSVSWTTMINGYVRIG 271
Query: 609 RWGEVVRVRKLMRKRGVVKQ 628
+ E + M R + Q
Sbjct: 272 KLDEARELLNEMPYRNIGAQ 291
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 45/222 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA L SC ++ ++H ++K + + + + N LI +YAKCG + A VF
Sbjct: 415 DQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVF 474
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + + +V +WNS+I G ++G+ + EAL
Sbjct: 475 NGICHADVISWNSLIGGY--------------------------AINGYGK-----EALK 503
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M SE A E +F LSAC AG VD FK ++V+A+ + + +
Sbjct: 504 LFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHY------A 557
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVS-WNSLITCYEQNG 231
++D+ G+ GR+ A + GM+ + W +L+ +G
Sbjct: 558 CMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHG 599
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 311/536 (58%), Gaps = 39/536 (7%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+H+ A + + S ++ACA + +HA LS+S + D ++ ++LI MY KCG
Sbjct: 51 LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
VS AR VFD M R++VSW LI Y QN ++A+ + M+ + P+ T S++ A
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ G Q+HA ++ D+ +G+AL+DMYA+C +++ A VFD
Sbjct: 171 TGACGGCSIGEQMHALAVK-YNWDEDVYVGSALLDMYARCEQMDMAIMVFD--------- 220
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+++ +N VSWNALIAG+ + + E L F ++R
Sbjct: 221 ----------------------RLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGF 258
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
TH+T+ ++ +A A + L+ GR H H++K SG++ FVGN+++ MY K GS
Sbjct: 259 GATHFTYSSMFSAFARIGALEQGRWVHAHLIK------SGQKLTAFVGNTMLGMYAKSGS 312
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D ++F+ M +RD V+WN M+ AQ G G EA+ F+++ CG + + +T + VL A
Sbjct: 313 MVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTA 372
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+EG+ YF M K++ + P DHY VDLLGRAG L EA + MPM+P A
Sbjct: 373 CSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 431
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL AC++H+N +G+Y A + E++P ++GP VLL N+YA G+W + RVRK+M+
Sbjct: 432 VWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMK 491
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
GV K+P CSW++I V++F+ D HP + +IY + + + +K+ GYVPN +
Sbjct: 492 ATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTA 547
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 206/447 (46%), Gaps = 70/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ ++ +C + K+++ R +HA + +S A + F+ N LI +Y KC
Sbjct: 63 YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKC-------------- 108
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
G + DA +F MP RD SW +++G+AQ+ +EA+G
Sbjct: 109 -----------------GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPD 151
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + ++F S L A +G Q+HAL K + DVY+GSAL+DMY +C +
Sbjct: 152 MLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQ 211
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VFD + +N VSWN+LI + + L F M +G T +S+ SA
Sbjct: 212 MDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA 271
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + A ++G +HA L++ + V GN ++ MYAK G + +AR VFDRM R
Sbjct: 272 FARIGALEQGRWVHAHLIKSGQKLTAFV-GNTMLGMYAKSGSMVDARKVFDRMDKR---- 326
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++V+WN ++ Q G +EA+ F +++ +
Sbjct: 327 ---------------------------DLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGI 359
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
TF ++L AC++ ++ G+ + + ++ E D +V S +D+ + G
Sbjct: 360 QLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQ----PEIDHYV--SFVDLLGRAGL 413
Query: 442 VEDG-CRIFETMVERDWVSWNAMIVGC 467
+++ +F+ +E W A++ C
Sbjct: 414 LKEALIFVFKMPMEPTAAVWGALLGAC 440
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 46/343 (13%)
Query: 232 PASDALEVFVR----MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRN 286
P+S A +R + A + P S+++ACA IHA L R C L
Sbjct: 36 PSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSC--LAG 93
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D L N+L+ MY KCG +++AR VFD+MP R+VVS T +
Sbjct: 94 DAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYL--------------------- 132
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
IAGY QN EA+GL + R P +TF +LL A +G Q
Sbjct: 133 ----------IAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H VK+ + D++VG++L+DMY +C ++ +F+ +V ++ VSWNA+I G
Sbjct: 183 MHALAVKYNW------DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAG 236
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A+ G L F +M G H T + A + G +E+GR + + K G
Sbjct: 237 FARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS-GQKL 295
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
M+ + ++G + +A+ + + M + D V W ++L A
Sbjct: 296 TAFVGNTMLGMYAKSGSMVDARKVFDRMDKR-DLVTWNTMLTA 337
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 24/250 (9%)
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
LL + PT + +++ ACA +L R H H+ + L D F+ NSLI
Sbjct: 50 LLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCL------AGDAFLLNSLIH 103
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG+V D +F+ M RD VSW +I G AQN EA+GL ML +P+ T
Sbjct: 104 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 163
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL----KDHY--TCMVDLLGRAGCLDEAK 548
+L A G G + H LA +D Y + ++D+ R +D A
Sbjct: 164 FTSLLKATGACGGCSIGEQM-------HALAVKYNWDEDVYVGSALLDMYARCEQMDMAI 216
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP-YVLLSNMYAEL 607
+ + + + + V W +L+A + GE K E++ + G + S+M++
Sbjct: 217 MVFDRL-VSKNEVSWNALIAGFARKAD---GETTLMKFAEMQRNGFGATHFTYSSMFSAF 272
Query: 608 GRWGEVVRVR 617
R G + + R
Sbjct: 273 ARIGALEQGR 282
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 350/667 (52%), Gaps = 78/667 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N++++ L+++G I A R+FA MPERD SWN MV G+ + EAL + +M
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y+F L C G D++MG +VHA + + + +V + +AL+ MY KCG + AR+V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FDGM + +SWN++I + +N LE+F+ M+ + ++P+ +T+ SV A L+
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
++H ++ D+ N+L+ MY G++ +A +F RM ++ +S T+M+SG
Sbjct: 315 GFAKEMHGFAVK-RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 329 YAKAS---------------------------------------SVKSARLMFTKMLERN 349
Y K +K L K R
Sbjct: 374 YEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRY 433
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVC--------------------------- 382
VV NAL+ Y ++ ++A+ +F+ + + V
Sbjct: 434 VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLG 493
Query: 383 ---PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P TF L+ACA L+ G++ H +V++ G+ S+ +V N+L+D+Y+KC
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI------GSEGYVPNALLDLYVKC 547
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G F E+D VSWN M+ G +G G AL LF +M+ GE PD VT + +L
Sbjct: 548 GQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALL 607
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACS AG+V +G + F M+++ + P HY CMVDLL R G L EA LI MP++PD
Sbjct: 608 CACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPD 667
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL C++HR++ LGE AK +LE+EP++ +VLL ++Y + G+W +V RVRK
Sbjct: 668 AAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKT 727
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
MR++G+ + GCSW+E+ G + F+ D+ HP KEI +VL + MK G+ P S
Sbjct: 728 MREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLE 787
Query: 678 DDEAYEE 684
D E E+
Sbjct: 788 DKEVSED 794
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ M + G + A RVF M ER++ SWN ++ Y + G +AL+++ RM+ +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD T V+ C + ++ G ++HA ++R +++ + NALV MYAKCG + A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRF-GFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFD M + + +S +M++G + +N E E
Sbjct: 252 RKVFDGMAVTDCISWNAMIAG-------------------------------HFENHECE 280
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L LF + V P T ++ A L+++ ++ H VK G D+
Sbjct: 281 AGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI------DVA 334
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSLI MY G + D +IF M +D +SW AMI G +NG+ +AL ++ M L
Sbjct: 335 FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHN 394
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT+ L AC+ G ++ G K +++ G ++++ ++ +D+A
Sbjct: 395 VSPDDVTIASALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKA 453
Query: 548 KTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSN 593
+ + M + D V W S++A C HR+ Y L ++P++
Sbjct: 454 IEVFKFM-AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNS 499
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 203/458 (44%), Gaps = 77/458 (16%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
V + +H +K FA ++ N LI +Y G + A K+F +M K+ +W ++I+G
Sbjct: 314 VGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISG 373
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
K GF D A ++A M ++H N + + +
Sbjct: 374 YEKNGFPDKALEVYALM-----------------------------ELH--NVSPDDVTI 402
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
SAL+ACA +G ++H L + V + +AL++MY K + A VF M E
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+++VSW+S+I + N + +AL F R M ++P+ VT + +SACA+ A + G +I
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYF-RYMLGHVKPNSVTFIAALSACAATGALRSGKEI 521
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
HA ++RC + ++ + NAL+D+Y KCG+ + A F ++VVS M+SG+
Sbjct: 522 HAYVLRC-GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGL 580
Query: 335 VKSARLMFTKMLE----RNVVSWNALIAGYTQNGENEEALGLFR---------------- 374
A +F +M+E + V++ AL+ ++ G + LF
Sbjct: 581 GDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYA 640
Query: 375 -----------------LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
L+ R + P +G LLN C ++LG A +
Sbjct: 641 CMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVI------ 694
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
L E +D+ L D+Y G R+ +TM E+
Sbjct: 695 -LELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 731
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 118/261 (45%), Gaps = 41/261 (15%)
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PDE ++ C A G++ AR E L LGNA++ M + G++ A
Sbjct: 94 PDEGAYVALFRLCEWRRAVDAGMRACAR-ADAEHPSFGLRLGNAMLSMLVRFGEIWHAWR 152
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF +MP R+V S MV GY K G EEA
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKV-------------------------------GFLEEA 181
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L L+ + + P YTF +L C + D ++GR+ H HV LRF G+E D+
Sbjct: 182 LDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHV----LRFGFGDEVDVL-- 235
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+ MY KCG + ++F+ M D +SWNAMI G +N L LF ML +
Sbjct: 236 NALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295
Query: 490 PDHVTMIGVLCACSHAGLVEE 510
P+ +T+ V A +G++ E
Sbjct: 296 PNLMTITSVTVA---SGMLSE 313
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F L +C + ++ + +HA +++ SE ++ N L+D+Y KCG A F
Sbjct: 498 NSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF 557
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
S K+V +WN +++G + G D A LF M E
Sbjct: 558 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVE 593
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 329/570 (57%), Gaps = 43/570 (7%)
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D SWNS+++ A+ +EAL F M + + SF A+ AC+ +D G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
Y SD+++ SALI MY CG++ AR+VFD + +RNIVSW S+I Y+ NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 235 DALEVFVRMMASGIEPD------EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F ++ + D + + SV+SAC+ +AA IH+ +++ +
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIK-RGFDRGV 218
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+GN L+D YAK G+ V AR +F +++++
Sbjct: 219 SVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIVDK 249
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH-YTFGNLLNACANLADLQLGRQA 407
+ VS+N++++ Y Q+G + EA +FR L +E V + T +L A ++ L++G+
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCI 309
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V++ GL E D+ VG S+IDMY KCG VE F+ M ++ SW AMI G
Sbjct: 310 HDQVIRMGL------EDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGY 363
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+G+ +AL LF M+ G +P+++T + VL ACSHAGL + G +F++M G+ P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPG 423
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CMVDLLGRAG L +A LI+ M M+PD++IW SLLAAC++H+N+ L E +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++PSN G Y+LLS++YA+ GRW +V RVR M+ RG+VK PG S +E+ G V+VF++ D
Sbjct: 484 ELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ HP ++IY L L R++ GYV N S
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 222/458 (48%), Gaps = 50/458 (10%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ A+ DS ++ S R++ +S F I + L+D+++ ++ F
Sbjct: 49 ADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQT---HQQAFVF 105
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
++F +++I G ++DA ++F +P+R+ SW SM+ G+ + +A+ F
Sbjct: 106 GYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 140 VKMHSE------NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ E L S +SAC+ + +H+ + K + V +G+ L+
Sbjct: 166 KDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLL 225
Query: 194 DMYGKCGR--VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP- 250
D Y K G V+ AR++FD + +++ VS+NS+++ Y Q+G +++A +VF R++ +
Sbjct: 226 DAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTF 285
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +TL++V+ A + A + G IH +++R L +D+++G +++DMY KCG++ AR
Sbjct: 286 NCITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCGRVETARLA 344
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FDRM +NV S T+M++GY +G +AL
Sbjct: 345 FDRMKNKNVRSWTAMIAGYG-------------------------------MHGHAAKAL 373
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF + V P + TF ++L AC++ +G H G RF G E +
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVG--WHWFNAMKG-RF--GVEPGLEHYG 428
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G ++ + + M +E D + W++++ C
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAAC 466
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 32/303 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC--GCLYGA 73
FLDS ++ +C R + T +H+ +IK F + + N L+D YAK G + A
Sbjct: 180 FLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
RK+FD++ +K+ ++NSI++ + G ++A +F + + ++N +
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCI----------- 288
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ + L A + S ++G +H + + DV +G+++I
Sbjct: 289 -------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGRV AR FD M+ +N+ SW ++I Y +G A+ ALE+F M+ SG+ P+ +
Sbjct: 330 DMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T SV++AC+ G + + L +VD+ + G L +A + +
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449
Query: 314 MPI 316
M +
Sbjct: 450 MKM 452
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 18/180 (10%)
Query: 341 MFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +++ +V SWN++IA ++G++ EAL F +++ S+ PT +F + AC++L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
D+ G+Q H F+ G +SDIFV ++LI MY CG +ED ++F+ + +R+ VS
Sbjct: 91 DIFSGKQTHQQA------FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT-------MIGVLCACSHA---GLVE 509
W +MI G NG +A+ LFK +L+ E D T M+ V+ ACS GL E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLI-EENDDDATMFLDSMGMVSVISACSRVAAKGLTE 203
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/693 (33%), Positives = 366/693 (52%), Gaps = 98/693 (14%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L + P LL +C K++ R +HA++IK+ + + ++L+++ C+
Sbjct: 31 LRNHPSLSLLHNC---KTLQSLRLIHAQMIKTGLHNTNYALSKLLEL-----CVISPH-- 80
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD + A +F ++ E + WN+M G A AL
Sbjct: 81 FDGLPY---------------------AISVFETIQEPNLLIWNTMFRGHALSSDPVSAL 119
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+V M S + Y+F L +CA S FK G Q+H + K Y D+++ ++LI +Y
Sbjct: 120 KLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVY 179
Query: 197 GKCGRVSCARRVFDGMRERNIVS-------------------------------WNSLIT 225
+ GR+ AR+VFD R++VS WN++I+
Sbjct: 180 VQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMIS 239
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y + G +ALE+F MM + I PDE T+ +VVSACA + + G Q+H+ +
Sbjct: 240 GYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHS-WIDDHGFG 298
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
++L + N+L+D+Y+KCG+L ++A +F +
Sbjct: 299 SNLKIVNSLMDLYSKCGEL-------------------------------ETACGLFEGL 327
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
L ++V+SWN LI GYT +EAL LF+ + R P T ++L ACA+L + +GR
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H ++ K L + + SLIDMY KCG +E ++F +++ + SWNAMI
Sbjct: 388 WIHVYIDKR----LKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G A +G A +F +M G +PD +T +G+L ACS +G+++ GR F +M++++ +
Sbjct: 444 GFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKIT 503
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY CM+DLLG +G EA+ +I M M+PD VIW SLL ACK+ N+ LGE A+
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQN 563
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L++IEP N G YVLLSN+YA GRW EV ++R L+ +G+ K PGCS IEI V+ F++
Sbjct: 564 LIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
DK HP N+EIY +L+ + +++ G+VP+ S+
Sbjct: 624 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 319/538 (59%), Gaps = 45/538 (8%)
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+ + +A++AC G QVHA + +RY V++G+ L+ MY +CG + AR V D
Sbjct: 43 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ER++VSW ++I+ Y Q +AL++F++M+ +G P+E TLA+V+++C+ + +G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+H+ L++ + + +G++L+DMYAK
Sbjct: 163 KQVHSLLVKT-NFESHMFVGSSLLDMYAK------------------------------- 190
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ +++ AR +F + ER+VVS A+I+GY Q G +EEAL LFR L E + H TF L
Sbjct: 191 SENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTL 250
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ A + LA L G+Q H +++ L F + + NSLIDMY KCG + R+F+
Sbjct: 251 VTALSGLASLDYGKQVHALILRKELPFF------VALQNSLIDMYSKCGKLLYSRRVFDN 304
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ER VSWNAM++G ++G G E + LFK L KPD VT++ VL CSH GLV+EG
Sbjct: 305 MLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEG 363
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
F ++ KE HY C++DLLGR+G L++A LIE MP + IWGSLL AC+
Sbjct: 364 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACR 423
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH N+ +GE VA+KLLE+EP N+G YV+LSN+YA G W +V +VRKLM ++ V K+PG
Sbjct: 424 VHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQ 483
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
SWI + ++ F ++ HP K+I +K + ++K G+VP+ S DDE E
Sbjct: 484 SWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKE 541
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 227/445 (51%), Gaps = 74/445 (16%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ +C+ +++ + R+VHAR+I +++ +F+ RL+ +Y +CG L
Sbjct: 49 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGAL--------------- 93
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
DDA + MPER SW +M+SG++Q +R EAL F+KM
Sbjct: 94 ----------------DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 137
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+EY+ + L++C+G G QVH+LL K+ + S +++GS+L+DMY K + A
Sbjct: 138 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 197
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
RRVFD + ER++VS ++I+ Y Q G +AL++F ++ + G++ + VT ++V+A + L
Sbjct: 198 RRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGL 257
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A+ G Q+HA ++R E L + L N+L+DMY+KCGKL +R VFD M R+VV
Sbjct: 258 ASLDYGKQVHALILRKE-LPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVV----- 311
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
SWNA++ GY ++G E + LF+ L +E V P
Sbjct: 312 --------------------------SWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDS 344
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN--SLIDMYMKCGSVE 443
T +L+ C++ + G VVK + + + G+ +ID+ + G +E
Sbjct: 345 VTLLAVLSGCSHGGLVDEGLDIFDTVVKE-------QSALLHTGHYGCIIDLLGRSGRLE 397
Query: 444 DGCRIFETM-VERDWVSWNAMIVGC 467
+ E M E W +++ C
Sbjct: 398 KALNLIENMPFESTPSIWGSLLGAC 422
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 171/327 (52%), Gaps = 33/327 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L SC +S+ ++VH+ ++K+ F S +F+ + L+D+YAK
Sbjct: 146 LATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK--------------- 190
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++N I +A R+F ++PERD S +++SG+AQ EAL F +
Sbjct: 191 SEN----------------IQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 234
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
++SE + +F + ++A +G G QVHAL+ + V + ++LIDMY KCG+
Sbjct: 235 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGK 294
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RRVFD M ER++VSWN+++ Y ++G + + +F + + ++PD VTL +V+S
Sbjct: 295 LLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDSVTLLAVLSG 353
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ EGL I +++ + ++D+ + G+L +A + + MP + S
Sbjct: 354 CSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS 413
Query: 322 ETSMVSGYAKA-SSVKSARLMFTKMLE 347
+ G + ++V L+ K+LE
Sbjct: 414 IWGSLLGACRVHANVHVGELVAQKLLE 440
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/497 (42%), Positives = 300/497 (60%), Gaps = 41/497 (8%)
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN+VSW S+I Y QNG +ALE + +M+ SG+ PD+ T S++ AC+SL G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+HA +++ E ++ NAL+ MY K + +A VF RM R+++S SM++G+++
Sbjct: 61 RQLHAHVLKSE-FGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQ 119
Query: 332 ASSVKSARLMFTKMLER---NVVSWNALIAGY---------------------------- 360
A F +ML + ++V+WNA+IAG+
Sbjct: 120 LGYELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDAIFFFEEMRCNADLVSWNAIL 179
Query: 361 TQNGENEEALGLFRLLKRESVC---PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
T +++A +FRLLK + P + T N+L A A +++G Q H + +K GL
Sbjct: 180 TACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 239
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
D V N LID+Y KCGS++ +IF++M+ D VSW+++I+G AQ GYG EAL
Sbjct: 240 ------CDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEAL 293
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LFK M KP+HVT +GVL ACSH GLVEEG K + +M KE G+AP ++H +CMVDL
Sbjct: 294 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 353
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
L RAGCL+EA+ I M PD V+W +LLAACK H N+ +G+ A+ +L+I+PSNS +
Sbjct: 354 LARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAH 413
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLL N+YA G W +V R+R LM++RGV K PG SWIE+ ++VF V+D HP +IY
Sbjct: 414 VLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIY 473
Query: 658 LVLKMLTREMKRVGYVP 674
+L+ L +M GYVP
Sbjct: 474 TMLEELLLQMLDAGYVP 490
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 192/416 (46%), Gaps = 81/416 (19%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
MPER+ SW S+++G++Q+ + AL ++ +M +++FGS + AC+ D +G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
Q+HA + KS + + + +ALI MY K + A VF M R+++SW S+I + Q
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACA------SLAAFKEGLQIHARLMRCEKL 284
G +AL F M+ G PD V ++++ A ++ F+E MRC
Sbjct: 121 GYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAYGELRDAIFFFEE--------MRCNA- 170
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVF-------------DRMPIRNVVS---------- 321
DLV NA++ C + ++A VF D + + NV+
Sbjct: 171 --DLVSWNAIL---TACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEI 225
Query: 322 ---------------ETSMVSG----YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+TS+ +G YAK S+K+A +F M+ +VVSW++LI GY Q
Sbjct: 226 GNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQ 285
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EEAL LF+ ++R V P H TF +L AC +H +V+ G +
Sbjct: 286 FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTAC-----------SHVGLVEEGWKLYGTM 334
Query: 423 ESDIFVGNS------LIDMYMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNG 471
E + + + ++D+ + G + + M + D V W ++ C +G
Sbjct: 335 EKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHG 390
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 190/403 (47%), Gaps = 40/403 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C + R++HA ++KS+F + I QN LI +Y K + A VF
Sbjct: 40 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVF 99
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER---DQCSWNSMVSGFAQHDRFSE 134
+M+ +++ +W S+I G + G+ +A F M + D +WN++++GFA + +
Sbjct: 100 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGRPDLVAWNAIIAGFA-YGELRD 158
Query: 135 ALGYFVKMH---------------------SENFAL----------SEY-SFGSALSACA 162
A+ +F +M E F L +Y + + L A A
Sbjct: 159 AIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA 218
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
+V ++G QVH K+ + D + + LID+Y KCG + A ++FD M ++VSW+S
Sbjct: 219 ETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSS 278
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
LI Y Q G +AL++F M ++P+ VT V++AC+ + +EG +++ + +
Sbjct: 279 LILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEF 338
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI-RNVVSETSMVSGYAKASSV---KSA 338
+ + +VD+ A+ G LNEA +M ++V ++++ +V K A
Sbjct: 339 GIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRA 398
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
K+ N + L Y G E+ L L+K+ V
Sbjct: 399 AENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGV 441
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 330/570 (57%), Gaps = 43/570 (7%)
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D SWNS+++ A+ +EAL F M + + SF A+ AC+ D G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
Y SD+++ SALI MY CG++ AR+VFD + +RNIVSW S+I Y+ NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 235 DALEVFVRMMASGIEPDE------VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F ++ + D+ + L SV+SAC+ + A IH+ +++ +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK-RGFDRGV 218
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+GN L+D YAK G+ V AR +F +++++
Sbjct: 219 SVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIVDK 249
Query: 349 NVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+ VS+N++++ Y Q+G + EA +FR L+K + V T +L A ++ L++G+
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V++ GL E D+ VG S+IDMY KCG VE + F+ M ++ SW AMI G
Sbjct: 310 HDQVIRMGL------EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+G+ +AL LF M+ G +P+++T + VL ACSHAGL EG ++F++M G+ P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CMVDLLGRAG L +A LI+ M M+PD++IW SLLAAC++H+N+ L E +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++ SN G Y+LLS++YA+ GRW +V RVR +M+ RG+VK PG S +E+ G V+VF++ D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ HP ++IY L L R++ GYV N S
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 212/411 (51%), Gaps = 26/411 (6%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S ++ DLA S A L S +R S+ TR S F I + L D+++
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTR--------SSFPCAIKACSSLFDIFS 94
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
++ F ++F +++I G ++DA ++F +P+R+ SW SM+ G
Sbjct: 95 GKQT---HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 126 FAQHDRFSEALGYF----VKMHSENFALSEYSFG--SALSACAGSVDFKMGTQVHALLSK 179
+ + +A+ F V + ++ A+ S G S +SAC+ + +H+ + K
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 180 SRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ V +G+ L+D Y K G V+ AR++FD + +++ VS+NS+++ Y Q+G +++A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 238 EVFVRMMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
EVF R++ + + + +TL++V+ A + A + G IH +++R L +D+++G +++D
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIID 330
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVS 352
MY KCG++ AR FDRM +NV S T+M++GY A +F M++ N ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 353 WNALIAGYTQNGENEEALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQ 402
+ +++A + G + E F +K R V P +G +++ LQ
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 152/307 (49%), Gaps = 32/307 (10%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC--GCL 70
D FLDS ++ +C R + T +H+ +IK F + + N L+D YAK G +
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
ARK+FD++ +K+ ++NSI++ + G ++A +F + + ++N++
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI-------- 288
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+ + L A + S ++G +H + + DV +G+
Sbjct: 289 ----------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++IDMY KCGRV AR+ FD M+ +N+ SW ++I Y +G A+ ALE+F M+ SG+ P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T SV++AC+ EG + + + L +VD+ + G L +A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 311 FDRMPIR 317
RM ++
Sbjct: 447 IQRMKMK 453
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 341 MFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +++ +V SWN++IA ++G++ EAL F +++ S+ PT +F + AC++L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
D+ G+Q H F+ G +SDIFV ++LI MY CG +ED ++F+ + +R+ VS
Sbjct: 91 DIFSGKQTHQQA------FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH------VTMIGVLCACSHA---GLVE 509
W +MI G NG +A+ LFK +L+ D + ++ V+ ACS GL E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/569 (37%), Positives = 321/569 (56%), Gaps = 7/569 (1%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A RLF +P D+ +N+++ + EAL M +E++ +
Sbjct: 60 GVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVV 119
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC + + VH + + V++G+AL+ Y G + +RR FD M +RN+V
Sbjct: 120 KACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVV 179
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWNS+I Y Q G + +F M G DE TL S++ AC+ + G +H R+
Sbjct: 180 SWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRM 239
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ R DL+L +ALVDMY KCG L AR F+ MPI++VVS TSM+ K SV +A
Sbjct: 240 L-VSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAA 298
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R F M ERN+VSWNA+I+ Y Q G+ EAL L+ ++ + + P T +L+A +
Sbjct: 299 RCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRI 358
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
DL +G+ H ++ + D+ + NSL+DMY KCG V+ +F M R+ V
Sbjct: 359 GDLTVGKMVHLYIRD------NIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVV 412
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN +I G A +G + + F+ M+ PD +T + +L ACSH GL+E G+ YF SM
Sbjct: 413 SWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESM 472
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ + +HY CMVDLLGR G L++A LI+ MPM+PD V+WG+LL AC++H N+ +
Sbjct: 473 RHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKI 532
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G V K+LLE+E + G +VL+SN+ E +W ++ R+RKLM++ G K G S IEI
Sbjct: 533 GRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINN 592
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
++ F V+D RH + EIY V+ L+ +
Sbjct: 593 SIHEFGVEDIRHERSSEIYAVVDQLSYHL 621
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 220/501 (43%), Gaps = 112/501 (22%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF ++ +C +++ VH ++ ++F+ N L+ YA G L +R+ FD+M
Sbjct: 116 PF--VVKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEM 173
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++NV +WNS M+ G+AQ E F
Sbjct: 174 VDRNVVSWNS-------------------------------MIGGYAQAGDTREVCSLFG 202
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + F E++ S L AC+ + ++G VH + S D+ + SAL+DMYGKCG
Sbjct: 203 EMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCG 262
Query: 201 RVSCARRV-------------------------------FDGMRERNIVSWNSLITCYEQ 229
+ ARR FD M ERNIVSWN++I+CY Q
Sbjct: 263 DLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQ 322
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL+++ +M + G+ PDE+TL +V+SA + G +H +R D+
Sbjct: 323 RGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHL-YIRDNIYNPDVS 381
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N+L+DMYAKCG+++ A +F M RN
Sbjct: 382 LVNSLLDMYAKCGQVDTAISLFSEMCNRN------------------------------- 410
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ--- 406
VVSWN +I G +G + + FR + +S P TF LL+AC++ L+ G+
Sbjct: 411 VVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFE 470
Query: 407 --AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG-CRIFETMVERDWVSWNAM 463
H + VKH + + ++D+ + G +E C I E ++ D V W A+
Sbjct: 471 SMRHVYNVKHEVEHYA----------CMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGAL 520
Query: 464 IVGCAQNGYGTEALGLFKKML 484
+ C +G + K++L
Sbjct: 521 LGACRIHGNVKIGRQVIKQLL 541
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 184/353 (52%), Gaps = 5/353 (1%)
Query: 5 RSVKQIVGDL---AFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
R V + G++ FL D LL +C + ++ R VH R++ S ++ +++ L
Sbjct: 195 REVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESAL 254
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+D+Y KCG L+ AR+ F+ M K+V +W S++ K G ++ A F MPER+ SWN
Sbjct: 255 VDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWN 314
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+M+S + Q + EAL + +M S+ A E + + LSA D +G VH + +
Sbjct: 315 AMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDN 374
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
Y+ DV + ++L+DMY KCG+V A +F M RN+VSWN +I +G A D + F
Sbjct: 375 IYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFF 434
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M+ PD +T +++SAC+ + G + +++++ +VD+ +
Sbjct: 435 RSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGR 494
Query: 301 CGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
G L +A C+ MP++ +VV +++ +VK R + ++LE +S
Sbjct: 495 RGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGIS 547
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 141/326 (43%), Gaps = 46/326 (14%)
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLR--NDLVLGNALVDMYAKCGKLNEARCVF 311
+L ++ C S+ Q+HA L+ L +DL+L + A G L AR +F
Sbjct: 13 SLQKLLRQCRSIQRLN---QLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLF 69
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D +P + V +++ Y +S + EAL
Sbjct: 70 DGIPGPDRVMYNTIIRAYCNSSCPR-------------------------------EALR 98
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGN 430
L R + R + P +T ++ AC QA H + HG+ G +FVGN
Sbjct: 99 LHRGMLRRGILPNEFTLPFVVKACTI-------AQAREHALAVHGVALRLGLVGQVFVGN 151
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y GS+ D R F+ MV+R+ VSWN+MI G AQ G E LF +M G
Sbjct: 152 ALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLE 211
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D T++ +L ACS G +E GR M L + +VD+ G+ G L A+
Sbjct: 212 DEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILE-SALVDMYGKCGDLWMARRC 270
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNI 576
E MP++ V W S+L A H ++
Sbjct: 271 FEMMPIK-SVVSWTSMLCAQTKHGSV 295
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/607 (35%), Positives = 322/607 (53%), Gaps = 104/607 (17%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I++ F S+ + N LID+Y KC +
Sbjct: 271 IHALIVRKGFGSDQHVGNSLIDMYTKCMQM------------------------------ 300
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
D+A ++F S+P SWN +++GF Q +++AL M +E ++ + L++
Sbjct: 301 -DEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLAS 359
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + D V AR +FD + ++ +W
Sbjct: 360 CIKARD-----------------------------------VLSARAMFDKISRPSVTTW 384
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+L++ Y Q D +E+F RM ++PD TLA ++S+C+ L G Q+H+ +R
Sbjct: 385 NTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVR 444
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L ND+ + + LVDMY+KCG+ + AR+
Sbjct: 445 F-LLHNDMFVASGLVDMYSKCGQ-------------------------------IGIARI 472
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F +M ER+VV WN++I+G + NEEA F+ ++ + PT ++ +++N+CA L+
Sbjct: 473 IFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSS 532
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ GRQ H +VK G + +++VG++LIDMY KCG+++D F+ MV ++ V+W
Sbjct: 533 VPQGRQIHAQIVKDGY------DQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAW 586
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N MI G AQNG+G +A+ LF+ ML ++PD VT I VL CSH+GLV+E +F+SM
Sbjct: 587 NEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMES 646
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+G+ PL +HYTC++D LGRAG L E + LI+ MP + D ++W LLAAC VH N LGE
Sbjct: 647 TYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGE 706
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
AK L ++P N PYVLLSN+YA LGR G+ VR LM RGVVK G SWI+ V
Sbjct: 707 CAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGV 766
Query: 641 NVFMVKD 647
+ FMV D
Sbjct: 767 HAFMVAD 773
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/602 (29%), Positives = 305/602 (50%), Gaps = 69/602 (11%)
Query: 19 SSPFAKLLDSCLR---SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
++ A +L +C++ S + R HAR++ + ++ F+ NRL+++Y+ G A +
Sbjct: 5 AAQLAGVLQACIKRSPKPSRAHARAAHARVLAAGLGADTFLINRLVELYSVSGLPCDALR 64
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F + N +++N+ ++ + G +D A L MP+R+ SWN++++ A+ +R EA
Sbjct: 65 AFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEA 124
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L + M E + ++ S LSAC G + H L K ++++ +AL+ M
Sbjct: 125 LELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGM 184
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG V A R+FDGM N VS+ +++ Q G DAL +F RM SG+ D V +
Sbjct: 185 YTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAV 244
Query: 256 ASVVSACAS--------LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+SV+ +CA + AF+ G IHA ++R + +D +GN+L+DMY KC +++EA
Sbjct: 245 SSVLGSCAQACASEFDVVRAFRLGQCIHALIVR-KGFGSDQHVGNSLIDMYTKCMQMDEA 303
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASS--------------------------------- 334
VFD +P + VS +++G+ +A S
Sbjct: 304 VKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKA 363
Query: 335 --VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
V SAR MF K+ +V +WN L++GY Q +++ + LFR ++ ++V P T +L
Sbjct: 364 RDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVIL 423
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
++C+ L L LG Q H+ V RFL +D+FV + L+DMY KCG + IF M
Sbjct: 424 SSCSRLGILDLGTQVHSASV----RFLL--HNDMFVASGLVDMYSKCGQIGIARIIFNRM 477
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
ERD V WN+MI G A + EA FK+M G P + ++ +C+ V +GR
Sbjct: 478 TERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGR 537
Query: 513 KYFSSMSKEHGLAPLKDHY-------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
+ + + +KD Y + ++D+ + G +D+A+ + M + + V W
Sbjct: 538 QIHAQI--------VKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCM-VTKNIVAWNE 588
Query: 566 LL 567
++
Sbjct: 589 MI 590
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 226/515 (43%), Gaps = 79/515 (15%)
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
+S + Y +A + + G + AR + D M +RN+VSWN++I ++ A +ALE
Sbjct: 67 RSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALE 126
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
++ M+ G+ P TLASV+SAC ++AA +G + H ++ L +L + NAL+ MY
Sbjct: 127 LYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKV-GLDENLFVENALLGMY 185
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
KCG V+ A +F M N VS+ A++
Sbjct: 186 TKCG-------------------------------GVEDAVRLFDGMASPNEVSFTAMMG 214
Query: 359 GYTQNGENEEALGLFRLLKRESV----CPTHYTFGNLLNACANLADL----QLGRQAHTH 410
G Q G ++AL LF + R V G+ ACA+ D+ +LG+ H
Sbjct: 215 GLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHAL 274
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
+V+ G SD VGNSLIDMY KC +++ ++F+++ VSWN +I G Q
Sbjct: 275 IVRKGF------GSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQA 328
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G +AL + M G +P+ VT +L +C A V R F +S+ P
Sbjct: 329 GSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISR-----PSVTT 383
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+ ++ + + L M +QPD +L++C + LG V +
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV 443
Query: 588 EIEPSN-----SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
N SG L +MY++ G+ G + M +R VV W ++ + +
Sbjct: 444 RFLLHNDMFVASG----LVDMYSKCGQIGIARIIFNRMTERDVV-----CWNSMISGLAI 494
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
H LN+E + K +M+ G +P S
Sbjct: 495 -------HSLNEEAFDFFK----QMRGNGMMPTES 518
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC R + +VH+ ++ +++F+ + L+D+Y+KCG + AR +F
Sbjct: 415 DRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIF 474
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M+ ++V WNS M+SG A H EA
Sbjct: 475 NRMTERDVVCWNS-------------------------------MISGLAIHSLNEEAFD 503
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +E S+ S +++CA G Q+HA + K Y +VY+GSALIDMY
Sbjct: 504 FFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYA 563
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR FD M +NIV+WN +I Y QNG A+++F M+ + PD VT +
Sbjct: 564 KCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIA 623
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ C+ E + + + L+D + G+L E + D MP +
Sbjct: 624 VLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCK 683
Query: 318 N 318
+
Sbjct: 684 D 684
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 180/367 (49%), Gaps = 30/367 (8%)
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L D L N LV++Y+ G +A F +P N S + +S +A + +AR +
Sbjct: 39 LGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLD 98
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+M +RNVVSWN +IA ++ EAL L+ + RE + PTH+T ++L+AC +A L
Sbjct: 99 EMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDD 158
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
GR+ H VK GL + ++FV N+L+ MY KCG VED R+F+ M + VS+ AM
Sbjct: 159 GRRCHGLAVKVGL------DENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAM 212
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE-EGRKYFSSMSKEH 522
+ G Q G +AL LF +M G + D V + VL +C+ A E + + F H
Sbjct: 213 MGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIH 272
Query: 523 GLAPLK----DHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
L K D + ++D+ + +DEA + +++P V W L+
Sbjct: 273 ALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP-NISTVSWNILITGFG----- 326
Query: 577 MLGEYVAKKLLEI----EPSNSGPY-VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG- 630
G Y K LE+ E S S P V SNM A + +V+ R + K + +P
Sbjct: 327 QAGSYA--KALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDK---ISRPSV 381
Query: 631 CSWIEIL 637
+W +L
Sbjct: 382 TTWNTLL 388
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ+ G+ S +A +++SC R SV R++HA+I+K + +++ + LID+YAKC
Sbjct: 506 KQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKC 565
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ----CSWNSMV 123
G + AR FD M KN+ WN +I G + GF + A LF M +Q ++ +++
Sbjct: 566 GNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVL 625
Query: 124 SGFAQHDRFSEALGYFVKMHS 144
+G + EA+ +F M S
Sbjct: 626 TGCSHSGLVDEAIAFFNSMES 646
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 243/674 (36%), Positives = 364/674 (54%), Gaps = 106/674 (15%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKC-GCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++H I K+++ S++ + N LI +Y C AR VFD + +N +WNSII+ +
Sbjct: 223 QIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRR 282
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G A LF+SM + E LG+ K N A SE+S
Sbjct: 283 GDAVSAYDLFSSMQK--------------------EGLGFSFK---PNDAFSEFSVLEE- 318
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
+ G +VHA + ++ + + V +G+ L++MY K G ++ A VF+ M E++
Sbjct: 319 -------GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDS 371
Query: 218 VSWNSLITCYEQNGPASDALEVF--------------------------------VRMMA 245
VSWNSLI+ +QN + DA E+F ++MM
Sbjct: 372 VSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR 431
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKL 304
G VT +++SA +SL+ + QIHA +++ C L +D +GNAL+ Y KCG++
Sbjct: 432 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYC--LSDDTAIGNALLSCYGKCGEM 489
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
NE +F RM SET R+ VSWN++I+GY N
Sbjct: 490 NECEKIFARM------SET------------------------RDEVSWNSMISGYIHNE 519
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+A+ L + ++ +TF +L+ACA++A L+ G + H ++ L ES
Sbjct: 520 LLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACL------ES 573
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+ VG++L+DMY KCG ++ R FE M R+ SWN+MI G A++G+G +AL LF +M+
Sbjct: 574 DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 633
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
L G+ PDHVT +GVL ACSH G VEEG ++F SMS+ + L+P +H++CMVDLLGRAG L
Sbjct: 634 LDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKL 693
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
DE I +MPM+P+ +IW ++L AC RN LG A+ LLE+EP N+ YVLL+N
Sbjct: 694 DEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLAN 753
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MYA +W +V + R M++ V K+ GCSW+ + V+VF+ DK HP IY L+
Sbjct: 754 MYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRE 813
Query: 663 LTREMKRVGYVPNA 676
L R+M+ GY+P
Sbjct: 814 LNRKMRDAGYIPQT 827
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 288/571 (50%), Gaps = 60/571 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F S F L++ S + R +H + IK F +F+ N LI++Y + G L A+K
Sbjct: 96 FSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 155
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD+MSN+N+ TW +I SG+ Q+ + EA
Sbjct: 156 LFDEMSNRNLVTWACLI-------------------------------SGYTQNGKPDEA 184
Query: 136 LGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
F M F + Y+FGSAL AC +G K+G Q+H L+SK+RY SDV + + LI
Sbjct: 185 CARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLI 244
Query: 194 DMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI---- 248
MYG C + AR VFDG+ RN +SWNS+I+ Y + G A A ++F M G+
Sbjct: 245 SMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSF 304
Query: 249 EP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+P D + SV+ ++G ++HA ++R N + +GN LV+MYAK G + +A
Sbjct: 305 KPNDAFSEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 359
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN- 366
VF+ M ++ VS S++SG + + A MF+ M E + VSWN++I + + +
Sbjct: 360 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASV 419
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+A+ F + R + TF N+L+A ++L+ ++ Q H V+K+ L D
Sbjct: 420 SQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL------SDDT 473
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+GN+L+ Y KCG + + +IF M E RD VSWN+MI G N +A+ L M+
Sbjct: 474 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 533
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAG 542
G++ D T +L AC+ +E G + + + A L+ + +VD+ + G
Sbjct: 534 KGQRLDSFTFATILSACASVATLERGMEVHACGIR----ACLESDVVVGSALVDMYSKCG 589
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+D A E MP++ + W S+++ H
Sbjct: 590 RIDYASRFFELMPLR-NVYSWNSMISGYARH 619
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS FA +L +C ++ VHA I++ S++ + + L+D+Y+KCG + A +
Sbjct: 538 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 597
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ M +NV++WNS+I+G +A+H +AL
Sbjct: 598 FELMPLRNVYSWNSMISG-------------------------------YARHGHGEKAL 626
Query: 137 GYFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMG 189
F +M + +F LSAC+ G FK ++V+ R S V
Sbjct: 627 KLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVY------RLSPRVEHF 680
Query: 190 SALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLI-TCYEQNG 231
S ++D+ G+ G++ + M + N++ W +++ C NG
Sbjct: 681 SCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANG 724
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/660 (34%), Positives = 361/660 (54%), Gaps = 69/660 (10%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
+ ++S + +L C + ++H +I S F + + N L+ +Y+KCG L AR
Sbjct: 209 SMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYAR 268
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K LF +MP+ D +WN +++G+ Q+ E
Sbjct: 269 K-------------------------------LFNTMPQTDTVTWNGLIAGYVQNGFTDE 297
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A F M S +F S L + S + +VH+ + + R DVY+ SALID
Sbjct: 298 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 357
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+Y K G V AR++F ++ ++I+ Y +G DA+ F ++ G+ + +T
Sbjct: 358 VYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLT 417
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ASV+ ACA++AA K G ++H +++ ++L N + +G+A+ DMYAKCG+L+
Sbjct: 418 MASVLPACAAVAALKPGKELHCHILK-KRLENIVNVGSAITDMYAKCGRLD--------- 467
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
A F +M +R+ V WN++I+ ++QNG+ E A+ LFR
Sbjct: 468 ----------------------LAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFR 505
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + + L+A ANL L G++ H +V+++ SD FV ++LID
Sbjct: 506 QMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAF------SSDTFVASTLID 559
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG++ +F M ++ VSWN++I +G E L L+ +ML G PDHVT
Sbjct: 560 MYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVT 619
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ ++ AC HAGLV+EG YF M++E+G+ +HY CMVDL GRAG + EA I++M
Sbjct: 620 FLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSM 679
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P PDA +WG+LL AC++H N+ L + ++ LLE++P NSG YVLLSN++A+ G W V+
Sbjct: 680 PFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVL 739
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+VR LM+++GV K PG SWI++ G ++F D HP + EIYL+LK L E+++ GYVP
Sbjct: 740 KVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVP 799
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 252/492 (51%), Gaps = 44/492 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F +++I G+I DA R+F +P RD WN M+ G+ + F A+G F +M
Sbjct: 146 DLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMR 205
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ ++ ++ LS CA +F GTQ+H L+ S + D + + L+ MY KCG +
Sbjct: 206 TSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLL 265
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR++F+ M + + V+WN LI Y QNG +A +F M+++G++PD VT AS + +
Sbjct: 266 YARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSIL 325
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ + ++H+ ++R ++ D+ L +AL+D+Y K G + AR +F + + +V T
Sbjct: 326 ESGSLRHCKEVHSYIVR-HRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCT 384
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M+S GY +G N +A+ FR L +E +
Sbjct: 385 AMIS-------------------------------GYVLHGLNIDAINTFRWLIQEGMVT 413
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L ACA +A L+ G++ H H++K L E+ + VG+++ DMY KCG ++
Sbjct: 414 NSLTMASVLPACAAVAALKPGKELHCHILKKRL------ENIVNVGSAITDMYAKCGRLD 467
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
F M +RD V WN+MI +QNG A+ LF++M + G K D V++ L A +
Sbjct: 468 LAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAA 527
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ + G++ + + A D + + ++D+ + G L A + M + + V
Sbjct: 528 NLPALYYGKEMHGYVIRN---AFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGK-NEV 583
Query: 562 IWGSLLAACKVH 573
W S++AA H
Sbjct: 584 SWNSIIAAYGNH 595
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 238/551 (43%), Gaps = 71/551 (12%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
++ L +C + V R+VH ++I +R++ +Y CG
Sbjct: 11 TTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRF-------- 62
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
DA LF + R WN M+ G F AL +
Sbjct: 63 -----------------------RDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLF 99
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ KM N + +Y+F + AC G + + VH + D++ GSALI +Y
Sbjct: 100 YFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYAD 159
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRVFD + R+ + WN ++ Y ++G +A+ F M S + VT +
Sbjct: 160 NGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCI 219
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S CA+ F G Q+H L+ D + N LV MY+KCG L AR +F+ MP +
Sbjct: 220 LSICATRGNFCAGTQLHG-LVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V+ +++G Y QNG +EA LF +
Sbjct: 279 TVTWNGLIAG-------------------------------YVQNGFTDEAAPLFNAMIS 307
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
V P TF + L + L+ ++ H+++V+H + F D+++ ++LID+Y K
Sbjct: 308 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF------DVYLKSALIDVYFK 361
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G VE +IF+ + D AMI G +G +A+ F+ ++ G + +TM V
Sbjct: 362 GGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASV 421
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+ ++ G++ + K+ L + + + + D+ + G LD A M +
Sbjct: 422 LPACAAVAALKPGKELHCHILKKR-LENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDR- 479
Query: 559 DAVIWGSLLAA 569
D+V W S++++
Sbjct: 480 DSVCWNSMISS 490
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/581 (38%), Positives = 346/581 (59%), Gaps = 20/581 (3%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A L +P R + +S VSG EA+ +V+M + Y+F S L A A
Sbjct: 8 ARSLLDGIPHRRGRAASSSVSGHGAE----EAVAGYVRMLAGGARPDAYTFPSLLKAAAA 63
Query: 164 SVDFKMGTQ-----VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD----GMRE 214
+ + +HA + K S+ + S+LI MY G + AR V +
Sbjct: 64 ARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGG 123
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
V WN+LI+ + ++G + FV M+ + VT SV+SAC G+Q+
Sbjct: 124 GAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQV 183
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H R++ L + V NALVDMYA+CG ++ A +F+ M +R++ S TS++SG ++
Sbjct: 184 HKRVLESGVLPDQRV-ENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQ 242
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
V AR +F M ER+ ++W A+I GY Q G +AL FR ++ V +T +++ A
Sbjct: 243 VDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTA 302
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
CA L L+ G A ++ + G++ D+FVGN+LIDMY KCGS+E +F+ M
Sbjct: 303 CAQLGALETGEWARIYMGRLGIKM------DVFVGNALIDMYSKCGSIERALDVFKDMHN 356
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
RD +W A+I+G A NG G EA+ +F +ML + PD VT +GVL AC+HAGLV++GR++
Sbjct: 357 RDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREF 416
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
F SM++ + ++P HY C++D+LGRAG L EA I+ MPM+P++ IWG+LLA+C+V+
Sbjct: 417 FLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYG 476
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N +GE A++LLE++P NS Y+LLSNMYA+ RW +V R+R+++ ++G+ K+PGCS I
Sbjct: 477 NSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMI 536
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
E+ G ++ F+ D+ HP+NKEIY L+ + +++ GYVP+
Sbjct: 537 EMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 161/303 (53%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + + +L +C + K + +VH R+++S + ++N L+D+YA+CG + A
Sbjct: 157 AMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAW 216
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+F+ M +++ +W S+I+GL++ G +D A LF MPERD +W +M+ G+ Q RF +
Sbjct: 217 VLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRD 276
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F M E++ S ++ACA + G + + DV++G+ALID
Sbjct: 277 ALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALID 336
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG + A VF M R+ +W ++I NG +A+++F RM+ + PDEVT
Sbjct: 337 MYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVT 396
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V++AC +G + + + +V L+D+ + GKL EA D+M
Sbjct: 397 FVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKM 456
Query: 315 PIR 317
P++
Sbjct: 457 PMK 459
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 194/491 (39%), Gaps = 108/491 (21%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA ++K S + LI +YA D + + V + TG
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYA---------ARGDGAAARAVLEAACLATG------ 122
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
P WN+++SG + RF + FV M + + ++ S LSA
Sbjct: 123 --------GGAP----VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSA 170
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC--------------------- 199
C D +G QVH + +S D + +AL+DMY +C
Sbjct: 171 CGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASW 230
Query: 200 ----------GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
G+V AR +FD M ER+ ++W ++I Y Q G DALE F M +
Sbjct: 231 TSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
DE T+ SVV+ACA L A + G + R ++ D+ +GNAL+DMY+KCG + A
Sbjct: 291 ADEFTMVSVVTACAQLGALETGEWARIYMGRL-GIKMDVFVGNALIDMYSKCGSIERALD 349
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF M R+ + T A+I G NG EEA
Sbjct: 350 VFKDMHNRDKFTWT-------------------------------AIILGLAVNGRGEEA 378
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES----- 424
+ +F + R P TF +L AC + + GR+ FLS E+
Sbjct: 379 IDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREF----------FLSMTEAYNISP 428
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
+ LID+ + G +++ + M ++ + W ++ C YG +G
Sbjct: 429 TVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASC--RVYGNSEIGELAAE 486
Query: 484 LLCGEKPDHVT 494
L PD+ T
Sbjct: 487 RLLELDPDNST 497
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 310/561 (55%), Gaps = 59/561 (10%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY--SFGSALSACAGSVDFKM 169
P SW + A F +A+ F++M + S S +AL +CA +
Sbjct: 10 PWPPPLSWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSAL 69
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMY-------------------GKCGRVSCARRVFD 210
G +HAL +S +D + +AL+++Y G + R+VFD
Sbjct: 70 GASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFD 129
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
M ER++VSWN+L+ + G +AL + +M G PD TL+SV+ A A K
Sbjct: 130 EMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKR 189
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G ++H +R ND+ +G++L+DMYA C + + + VFD +P+R+ +
Sbjct: 190 GSEVHGFAVR-NGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPIL--------- 239
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
WN+++AG QNG EEALG+FR + + V P TF +
Sbjct: 240 ----------------------WNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSS 277
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L+ C NLA L+ G+Q H +V++ G E ++F+ +SLIDMY KCG + IF+
Sbjct: 278 LIPVCGNLASLRFGKQLHAYVIRGGF------EDNVFISSSLIDMYCKCGEISIAHHIFD 331
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M D VSW AMI+G A +G EAL LF++M L KP+H+T + VL ACSHAGLV++
Sbjct: 332 RMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDK 391
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G KYF SMS +G+ P +H + D+LGRAG LDEA I M ++P A +W +LL AC
Sbjct: 392 GWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRAC 451
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+VH+N ML E VAKK++E+EP + G +V+LSNMY+ GRW E +RK MRK+G+ K P
Sbjct: 452 RVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPA 511
Query: 631 CSWIEILGHVNVFMVKDKRHP 651
CSWIE+ ++VF+ D+ HP
Sbjct: 512 CSWIEVKNKLHVFVAHDRSHP 532
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 197/369 (53%), Gaps = 24/369 (6%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I+S ++ F N L+++Y K C Y + + V + + G
Sbjct: 73 LHALAIRSGAFADRFTANALLNLYCKLPCSY--------LHSTGVTS----VGGTGSSTA 120
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ ++F M ERD SWN++V G A+ R EAL KM E F ++ S L
Sbjct: 121 LESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPI 180
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A D K G++VH ++ + +DV++GS+LIDMY C R + +VFD + R+ + W
Sbjct: 181 FAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILW 240
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS++ QNG +AL +F RM+ +G+ P VT +S++ C +LA+ + G Q+HA ++R
Sbjct: 241 NSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIR 300
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+++ + ++L+DMY KCG+++ A +FDRM +VVS T+M+ GYA + A +
Sbjct: 301 -GGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALV 359
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+F +M + N +++ A++ + G ++ F+ + HY L CA
Sbjct: 360 LFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMS------DHYGIVPTLEHCA 413
Query: 397 NLADLQLGR 405
LAD+ LGR
Sbjct: 414 ALADI-LGR 421
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 166/366 (45%), Gaps = 35/366 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + +L V VH +++ F +++F+ + LID+YA C + KVF
Sbjct: 170 DSFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVF 229
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + ++ WNS++ G AQ+ EALG
Sbjct: 230 DNLPVRDPILWNSVLAGC-------------------------------AQNGSVEEALG 258
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +F S + C + G Q+HA + + + +V++ S+LIDMY
Sbjct: 259 IFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYC 318
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S A +FD M ++VSW ++I Y +GPA +AL +F RM +P+ +T +
Sbjct: 319 KCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLA 378
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC+ +G + + + L AL D+ + G+L+EA +M I+
Sbjct: 379 VLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIK 438
Query: 318 NVVSE-TSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLF 373
S ++++ + A + K++E R++ S L Y+ +G EA L
Sbjct: 439 PTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLR 498
Query: 374 RLLKRE 379
+ ++++
Sbjct: 499 KSMRKK 504
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/626 (36%), Positives = 351/626 (56%), Gaps = 52/626 (8%)
Query: 35 VSDTRRVHARI-IKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS-NKNVFTWNSII 92
V+D R + R+ ++ +F+ + ++ YA+ G L AR V D+M +K +N++I
Sbjct: 96 VADARSLFDRMPVRDEFSWTV-----MVSCYARGGDLELARDVLDRMPGDKCTACYNAMI 150
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY 152
+G K G DDA +L MP D SWNS ++G Q A+ +F +M +
Sbjct: 151 SGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKD-----MT 205
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
S+ L+ + D + A + S +V L++ Y + GR++ AR +FD M
Sbjct: 206 SWNLMLAGFVRTGDLNAASSFFAKIE----SPNVISWVTLLNGYCRAGRIADARDLFDRM 261
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
ERN+V+WN ++ Y P +A ++F M + ++ +++S A +E
Sbjct: 262 PERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIK----NSISWTTIISGLARAGKLQEAK 317
Query: 273 QI----------------HARLMR--CEKLR--------NDLVLGNALVDMYAKCGKLNE 306
+ H L R + R +D V N ++ Y +CG L E
Sbjct: 318 DLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEE 377
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A +F RMP +++VS +M++GYA+ + A +F +M RN VSWN++I+G+ QN
Sbjct: 378 AMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRF 437
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+AL F L++R + T+ + L ACANLA L +GRQ H +V+ SG +D
Sbjct: 438 VDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVR------SGHINDS 491
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
F GN+LI Y KCG + + +IF+ MV +D VSWNA+I G A NG GTEA+ +F++M
Sbjct: 492 FAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEAN 551
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G +PD VT +G+L ACSHAGL++EG +F SM+KE+ L P+ +HY CMVDLLGRAG L+E
Sbjct: 552 GVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNE 611
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A L++ M +QP+A +WG+LL AC +H+N L + A++L E+EP + YVLLSN+ AE
Sbjct: 612 AFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAE 671
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCS 632
G+W E + R ++++GV K PG +
Sbjct: 672 AGKWDESEKARASIKEKGVNKPPGLA 697
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 166/313 (53%), Gaps = 4/313 (1%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+ K ++ ++F + L+ L+ D RR I + N +I Y
Sbjct: 314 QEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARR----IFDGMEVHDTVCWNTMISGY 369
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
+CG L A +F +M NK++ +WN++I G + G + A +F M R+ SWNS++S
Sbjct: 370 VQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVIS 429
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
GF Q+DRF +AL +F+ M ++ S L ACA +G Q+H LL +S + +
Sbjct: 430 GFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHIN 489
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + G+ALI Y KCGR+ A+++FD M ++IVSWN+LI Y NG ++A+ VF M
Sbjct: 490 DSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREME 549
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
A+G+ PDEVT ++SAC+ EGL + + L+ +VD+ + GKL
Sbjct: 550 ANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKL 609
Query: 305 NEARCVFDRMPIR 317
NEA + M I+
Sbjct: 610 NEAFELVQGMQIQ 622
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 251/548 (45%), Gaps = 72/548 (13%)
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
F N+ + A+ G L AR++FD M +N T+N++++ L + G ID+A LF MP R
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR 78
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
+ SWN+M++ + H R ++A F +M + E+S+ +S A D ++ V
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRD----EFSWTVMVSCYARGGDLELARDVL 134
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ + ++ Y +A+I Y K GR A ++ M ++VSWNS + Q+G
Sbjct: 135 DRMPGDKCTA-CY--NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMV 191
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG-NA 293
A++ F M + + S LA F ++A K+ + V+
Sbjct: 192 RAVQFFDEM-----------VKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVT 240
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L++ Y + G++ +AR +FDRMP RNVV+ M+ GY S ++ A +F +M +N +SW
Sbjct: 241 LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISW 300
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+I+G + G+ +EA L + V L N+AD
Sbjct: 301 TTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQ--RNMAD------------- 345
Query: 414 HGLRFLSGEE-SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
R G E D N++I Y++CG +E+ +F+ M +D VSWN MI G AQ+G
Sbjct: 346 DARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQ 405
Query: 473 GTEALGLFKKM----------LLCG---------------------EKPDHVTMIGVLCA 501
+A+G+F++M ++ G + D T L A
Sbjct: 406 MHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRA 465
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
C++ ++ GR+ + + + + D + ++ + G + EAK + + M + D
Sbjct: 466 CANLAVLHVGRQLHNLLVRS---GHINDSFAGNALISTYAKCGRILEAKQIFDEM-VYKD 521
Query: 560 AVIWGSLL 567
V W +L+
Sbjct: 522 IVSWNALI 529
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 47/297 (15%)
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
A+ G+L AR +FD MP+RN V+ +M+S A+ + AR +F M RN VSWNA+IA
Sbjct: 29 ARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIA 88
Query: 359 GYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+ +G +A LF R+ R+ +++ +++ A DL+L R L
Sbjct: 89 ALSDHGRVADARSLFDRMPVRD-----EFSWTVMVSCYARGGDLELARDV--------LD 135
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ G++ N++I Y K G +D ++ M D VSWN+ + G Q+G A+
Sbjct: 136 RMPGDKCTACY-NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAV 194
Query: 478 GLFKKM---------LLCG-----------------EKPDHVTMIGVLCACSHAGLVEEG 511
F +M +L G E P+ ++ + +L AG + +
Sbjct: 195 QFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADA 254
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
R F M + + +A + M+D ++EA L + MP++ +++ W ++++
Sbjct: 255 RDLFDRMPERNVVA-----WNVMLDGYVHLSPIEEACKLFDEMPIK-NSISWTTIIS 305
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/661 (34%), Positives = 345/661 (52%), Gaps = 71/661 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +++ C +V + + ARI++S F S + LI +Y +CG L
Sbjct: 263 YMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGIL----------- 311
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
D A L M +RD +WN+MV+ AQ+ EA+ +
Sbjct: 312 --------------------DRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRR 351
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCG 200
M E F ++ ++ S L ACA G ++HA +L +V +G+++I MYGKCG
Sbjct: 352 MDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCG 411
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A VF+ M ++ VSWN++I N DALE+F M G+ +E TL S++
Sbjct: 412 QTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLE 471
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC L K QIHAR N +GN++V+MYA+CG L +
Sbjct: 472 ACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLD-------------- 517
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ--NGENEEALGLFRLLKR 378
A+ F + E+ +V+W+ ++A Y Q +G A F+ ++
Sbjct: 518 -----------------AKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEA 560
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E + P TF + L+ACA +A L+ GR H G E+ + +GN++I+MY K
Sbjct: 561 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFV-----ETSLVLGNTIINMYGK 615
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CGS D +F+ M E+ +SWN++IV A NG+ EAL ++MLL G PD T + +
Sbjct: 616 CGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSI 675
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM-Q 557
L SHAGL+E G ++F S ++HGL P C+VDLL R G LD A+ LI A P Q
Sbjct: 676 LYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQ 735
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
D + W +LLAACK + + G A+++ E+EP +SG +V+L+N+YA +GRW + R+R
Sbjct: 736 ADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIR 795
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K+M + V K+PGCSWIE+ G V+ F+ + +HP +EI L+ LT M+ GYVP+ +
Sbjct: 796 KMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTT 855
Query: 678 D 678
+
Sbjct: 856 N 856
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 253/507 (49%), Gaps = 70/507 (13%)
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KC + A VFD +S KNVF SW M
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVF-------------------------------SWTMM 29
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++ ++Q+ + EAL F +M E + F AL ACA S + G Q+H+ + S
Sbjct: 30 MAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGL 89
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
+S++ + ++L++MYGKC V CA +VFDGM R++VSW +++ Y QNG S ALE R
Sbjct: 90 TSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSR 149
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M A G++P++VT ++V CA L G +IH R++ E L D +LGNALV MY CG
Sbjct: 150 MDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIIN-EGLEPDGILGNALVHMYGSCG 208
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
++ + VF RM +S+ L++T M IAG +Q
Sbjct: 209 SFDDMKSVFSRMG--------------------QSSVLLWTTM-----------IAGCSQ 237
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
NG+ EE L +FR + E V T+ +++ C NL ++ G +++ S
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILE------SPF 291
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
S + SLI +Y +CG ++ + E M +RD V+WNAM+ CAQNG EA+ L ++
Sbjct: 292 CSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRR 351
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M + G + VT + VL AC++ + +GR+ + + L ++ + G+ G
Sbjct: 352 MDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCG 411
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ A ++ EAMP + D V W +++ A
Sbjct: 412 QTEAAMSVFEAMPRKDD-VSWNAVINA 437
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 257/552 (46%), Gaps = 69/552 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LD+C S + R++H+ ++ S S I I N L+++Y KC + A KVF
Sbjct: 57 DKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVF 116
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M LL RD SW +M++ +AQ+ +S+AL
Sbjct: 117 DGM--------------LL-----------------RDVVSWTAMLAVYAQNGCWSQALE 145
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M +E ++ +F + + CA +G ++H + D +G+AL+ MYG
Sbjct: 146 CLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYG 205
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
CG + VF M + +++ W ++I QNG + L VF +M G++ +EVT S
Sbjct: 206 SCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMS 265
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+V C +L A KEG I AR++ + L L +L+ +Y +CG L+ A+ + + M R
Sbjct: 266 MVEVCRNLDAVKEGEMIDARILESPFCSSTL-LATSLISLYGQCGILDRAKGLLEHMYQR 324
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV+WNA++ QNG+N EA+ L R +
Sbjct: 325 -------------------------------DVVAWNAMVTACAQNGDNWEAIHLLRRMD 353
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E T+ ++L ACANL L GR+ H V+ GL + ++ VGNS+I MY
Sbjct: 354 MEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLL-----QREVAVGNSVITMYG 408
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG E +FE M +D VSWNA+I N +AL LF M L G + + T++
Sbjct: 409 KCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLS 468
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC ++ R+ + + +V++ R G L +AK +++ +
Sbjct: 469 LLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-E 527
Query: 558 PDAVIWGSLLAA 569
V W +LAA
Sbjct: 528 KGLVAWSIILAA 539
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 14/305 (4%)
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y K + V A ++F + +NV SW ++A Y+QNG EAL LF ++ E P F
Sbjct: 2 YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L+ACA +L GRQ H+ VV GL S+I + NSL++MY KC V ++
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGL------TSNIIISNSLVNMYGKCQDVPCAEKV 115
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ M+ RD VSW AM+ AQNG ++AL +M G KP+ VT + ++ C+ L+
Sbjct: 116 FDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLL 175
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ GRK + E GL P +V + G G D+ K++ M Q ++W +++A
Sbjct: 176 DLGRKIHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIA 233
Query: 569 ACKVHRNIMLGEYVAKKL-LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
C + G V +K+ LE +N Y+ + E+ R + V+ +++ R +++
Sbjct: 234 GCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSM----VEVCRNLDAVKEGEMIDAR-ILE 288
Query: 628 QPGCS 632
P CS
Sbjct: 289 SPFCS 293
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 33/299 (11%)
Query: 13 DLAFLDSSPFA--KLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCGC 69
+L L S+ F LL++C + + R++HAR F + + N ++++YA+CG
Sbjct: 455 ELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGS 514
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L A+K FD + K GL+ W I A P R
Sbjct: 515 LLDAKKAFDSLEEK----------GLVAWSIILAAYAQSKDGPGR--------------- 549
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYM 188
A +F +M +E E +F SAL ACA + G +H + S + + + +
Sbjct: 550 ----RAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVL 605
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+ +I+MYGKCG S A+ VFD M E+ ++SWNSLI Y NG A +AL M+ G
Sbjct: 606 GNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGF 665
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+PD T S++ + + G++ ++ L LVD+ A+ G L+ A
Sbjct: 666 DPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAA 724
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/639 (36%), Positives = 350/639 (54%), Gaps = 73/639 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +HA++I++ ++ N LI Y KCG L AR++FD
Sbjct: 31 KAIHAQMIRAAH-FDVIQHNHLIAFYGKCGRLGLARQMFD-------------------- 69
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+MP R+ S N ++SG+A R S+AL + + +F+L+EY +AL
Sbjct: 70 -----------AMPSRNAVSGNLLMSGYASAGRHSDALAL---LKAADFSLNEYVLSTAL 115
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SA A + MG Q H KS Y+ +A++ MY +C V A +VF+ + +I
Sbjct: 116 SAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIF 175
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
++NS+I + G ++ + M+ + D V+ +V+ CAS G Q+HA+
Sbjct: 176 AFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQA 235
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
++ +L ++ +G+ALVDMY KC + A
Sbjct: 236 LK-RRLEQNVYVGSALVDMYGKC-------------------------------DCARDA 263
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
F + E+NVVSW A++ YTQN E+AL LF L+ E V P +T+ LN+CA L
Sbjct: 264 HSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGL 323
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L+ G +K +G + V N+L++MY K GS+ D R+F +M RD V
Sbjct: 324 AALKNGNALSASAMK------TGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVV 377
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN++I+G A +G EA+ +F MLL P +VT +GVL AC+ GLV+EG Y + M
Sbjct: 378 SWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIM 437
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
KE G+ P ++HYTCMV LL RAG LDEA+ I + + D V W SLL++C+V++N L
Sbjct: 438 MKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGL 497
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G VA+++L+++P++ G YVLLSNMYA+ RW VV+VRKLMR+RGV K+PG SWI++
Sbjct: 498 GHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGS 557
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+VF +DK H +I + LK L ++K +GYVPN +
Sbjct: 558 EVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCA 596
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 185/378 (48%), Gaps = 39/378 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ + L + +S R+ H +KS ++ N ++ +Y +C + A KV
Sbjct: 106 LNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKV 165
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ +S ++F +NS+I G L G D + R+ SMV Q D
Sbjct: 166 FENVSGFDIFAFNSMINGFLDLGEFDGSIRIV-----------RSMVGEVEQWDHV---- 210
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
S+ + L CA + + +G QVHA K R +VY+GSAL+DMY
Sbjct: 211 ----------------SYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMY 254
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKC A F+ + E+N+VSW +++T Y QN DAL++F+ + G+ P+E T A
Sbjct: 255 GKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYA 314
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++CA LAA K G + A M+ L + NAL++MY+K G +++A VF MP
Sbjct: 315 VALNSCAGLAALKNGNALSASAMKTGHW-GALSVCNALMNMYSKSGSIHDAWRVFLSMPW 373
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGL 372
R+VVS S++ GYA + A +F ML + V++ ++ Q G +E L
Sbjct: 374 RDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYY 433
Query: 373 FRLLKRE-SVCP--THYT 387
++ +E + P HYT
Sbjct: 434 LNIMMKEMGIKPGREHYT 451
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 316/524 (60%), Gaps = 39/524 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + L C G VHA + +S + D+ MG+ L++MY KCG + AR+VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+R+ V+W +LI+ Y Q+ DAL F +M+ G P+E TL+SV+ A A+ G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H ++C +++ +G+AL+D+Y + G +++A+
Sbjct: 183 LHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQ------------------------- 216
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
L+F + RN VSWNALIAG+ + E+AL LF+ + R+ P+H+++ +L
Sbjct: 217 ------LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC++ L+ G+ H +++K SGE+ F GN+L+DMY K GS+ D +IF+ +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIK------SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+RD VSWN+++ AQ+G+G EA+ F++M G +P+ ++ + VL ACSH+GL++EG
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y+ M K+ G+ P HY +VDLLGRAG L+ A IE MP++P A IW +LL AC++H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N LG Y A+ + E++P + GP+V+L N+YA GRW + RVRK M++ GV K+P CSW
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI +++F+ D+RHP +EI + + ++K +GYVP+ S
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 203/390 (52%), Gaps = 38/390 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + LL C K + R VHA I++S F +I + N L+++YAKCG L ARKV
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV- 117
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F MP+RD +W +++SG++QHDR +AL
Sbjct: 118 ------------------------------FEKMPQRDFVTWTTLISGYSQHDRPCDALL 147
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M ++ +E++ S + A A G Q+H K + S+V++GSAL+D+Y
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + A+ VFD + RN VSWN+LI + + ALE+F M+ G P + AS
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 258 VVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ AC+S ++G +HA +++ EKL GN L+DMYAK G +++AR +FDR+
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGL 372
R+VVS S+++ YA+ K A F +M + N +S+ +++ + +G +E
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ L+K++ + P + + +++ DL
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A L +C + + + VHA +IKS F N L+D+YAK G ++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH---------- 314
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DA ++F + +RD SWNS+++ +AQH EA+ +F +
Sbjct: 315 ---------------------DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E SF S L+AC+ S G + L+ K + + ++D+ G+ G
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 202 VSCARRVFDGMR-ERNIVSWNSLITC 226
++ A R + M E W +L+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNA 439
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 336/576 (58%), Gaps = 48/576 (8%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
R F+S P ++ +S + R EAL V + E + + + + L+AC
Sbjct: 10 RSFSSSPNSVLQTFRP-ISQLCSNGRLQEALLEMVMLGPE---IGFHCYDALLNACLDKR 65
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ G +VHA + K+RY Y+ + L+ YGKC + AR+V D M E+N+VSW ++I+
Sbjct: 66 ALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 125
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q G +S+AL VF MM S +P+E T A+V+++C + G QIH +++
Sbjct: 126 RYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKW-NYD 184
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ + +G++L+DMYAK A ++ AR +F +
Sbjct: 185 SHIFVGSSLLDMYAK-------------------------------AGQIEEAREIFECL 213
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
ER+VVS A+IAGY Q G +EEAL +F+ L+ E + P + T+ +LL A + LA L G+
Sbjct: 214 PERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGK 273
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
QAH HV++ L F + + NSLIDMY KCG++ R+F+ M ER +SWNAM+V
Sbjct: 274 QAHCHVLRRELPFYA------VLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLV 327
Query: 466 GCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHAGLVEEGRKYFSSM-SKE 521
G +++G G E L LF+ L+ EK PD VT++ VL CSH + + G + M + E
Sbjct: 328 GYSKHGLGREVLELFR--LMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGE 385
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+G+ P +HY C+VD+LGRAG +DEA I+ MP +P A + GSLL AC+VH ++ +GEY
Sbjct: 386 YGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEY 445
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
V +L+EIEP N+G YV+LSN+YA GRW +V VR +M ++ V K+PG SWI+ ++
Sbjct: 446 VGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 505
Query: 642 VFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
F D+ HP +E+ +K ++ +MK+ GYVP+ S
Sbjct: 506 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDIS 541
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 201/377 (53%), Gaps = 64/377 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL++CL +++ + +RVHA +IK+++ +++ RL+ Y KC CL ARKV D+M
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 112
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
PE++ SW +M+S ++Q SEAL F +
Sbjct: 113 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALSVFAE 142
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++F + L++C + +G Q+H L+ K Y S +++GS+L+DMY K G+
Sbjct: 143 MMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 202
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +F+ + ER++VS ++I Y Q G +ALE+F R+ + G+ P+ VT AS+++A
Sbjct: 203 IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTA 262
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LA G Q H ++R E L VL N+L+DMY+KCG L+ A+ +FD MP R +S
Sbjct: 263 LSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAIS 321
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
WNA++ GY+++G E L LFRL++ E
Sbjct: 322 -------------------------------WNAMLVGYSKHGLGREVLELFRLMRDEKR 350
Query: 381 VCPTHYTFGNLLNACAN 397
V P T +L+ C++
Sbjct: 351 VKPDAVTLLAVLSGCSH 367
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 35/297 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L SC+R+ ++ +++H I+K + S IF+ + L+D+YAK G
Sbjct: 155 FATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ------------ 202
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I++A +F +PERD S ++++G+AQ EAL F +
Sbjct: 203 -------------------IEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQR 243
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ SE + ++ S L+A +G G Q H + + + ++LIDMY KCG
Sbjct: 244 LQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 303
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTLASVV 259
+S A+R+FD M ER +SWN+++ Y ++G + LE+F R+M ++PD VTL +V+
Sbjct: 304 LSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVL 362
Query: 260 SACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S C+ GL I+ ++ E ++ D +VDM + G+++EA RMP
Sbjct: 363 SGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMP 419
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/610 (37%), Positives = 341/610 (55%), Gaps = 19/610 (3%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I L G + A LF +PE D +W ++SG QH +A+ + + S N
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
++ S ACA S D + ++H + ++ D+ +G+ALIDM+GKC V+ AR VFD
Sbjct: 77 KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
M +++VSW S+ CY G + +F M +GI + +T++S++ ACA K
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKL 194
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G ++H ++R E + ++ + +ALV+MYA L +AR VFD M R++VS M++ Y
Sbjct: 195 GREVHGFILRNE-MEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYF 253
Query: 331 KASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+ +F +M ++ N SWNA I+G QNG++E ALG+ ++ + P
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T + L C NL L+ G++ H +V +H D+ + +L+ +Y KCG +E
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFI------EDVTITTALVLLYAKCGDLELSR 367
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F TM +D V+WN MI+ + +G G E+L LF KML G +P+ VT IGVL CSH+
Sbjct: 368 HVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQ 427
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
L +EG F+SMS EH + P DHY+CMVD+L RAG L+EA I MP++P A WG+L
Sbjct: 428 LADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGAL 487
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L AC+V++N+ LG A +L EIEP N+G YVLLSN+ +W E +RK+MR +G+
Sbjct: 488 LGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLA 547
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDE 680
K PG SW+++ V F+ DK + IY L + +M+ GY PN D E
Sbjct: 548 KTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQE 607
Query: 681 AYEEQNGSNS 690
EE S+S
Sbjct: 608 QREETLCSHS 617
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 179/402 (44%), Gaps = 76/402 (18%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C S + +++H I+ F ++ + N LID++ KC + GAR VFD M K+V
Sbjct: 86 ACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV- 144
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
SW SM + + + F +M
Sbjct: 145 ------------------------------SWTSMTYCYVNCGMCRQGILLFREMGLNGI 174
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ + S L ACA + K+G +VH + ++ +VY+ SAL++MY + AR
Sbjct: 175 RANSLTVSSILPACADYI--KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARL 232
Query: 208 VFDGMRERNIVSWNSLITCY-----------------------------------EQNGP 232
VFD M R+IVSWN ++T Y QNG
Sbjct: 233 VFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQ 292
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
AL + +M SGI+P+ +T+ S + C +L + + G +IH + R D+ +
Sbjct: 293 HELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFR-HWFIEDVTITT 351
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML----ER 348
ALV +YAKCG L +R VF+ MP ++VV+ +M+ + + ++F KML E
Sbjct: 352 ALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEP 411
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCP--THYT 387
N V++ +++G + + +E L +F + E S+ P HY+
Sbjct: 412 NSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYS 453
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 35/193 (18%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C +S+ + +H + + F ++ I L+ +YAKCG L +R VF+ M K+V
Sbjct: 319 LPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDV 378
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
WN++I NSM H + E+L F KM
Sbjct: 379 VAWNTMIMA-------------------------NSM------HGKGGESLILFNKMLDS 407
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ +F LS C+ S G V +++ S+ + D S ++D+ + GR+
Sbjct: 408 GVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEE 467
Query: 205 ARRVFDGMRERNI 217
A +D +R+ I
Sbjct: 468 A---YDFIRKMPI 477
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 331/606 (54%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M G A AL +V M S + Y+F L +CA
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S FK G Q+H + K D+Y+ ++LI MY + GR+ A +VFD R++VS
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
WN++I+ Y + G +ALE+F MM + + PDE
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 223
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ +VVSACA + + G Q+H+ + ++L + NAL+D+Y+KCG+L A +F+
Sbjct: 224 STMVTVVSACAQSGSIELGRQVHS-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 282
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+P ++ V+SWN LI GYT +EAL L
Sbjct: 283 GLPYKD-------------------------------VISWNTLIGGYTHMNLYKEALLL 311
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K L G + + SL
Sbjct: 312 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR----LKGVANASSLRTSL 367
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F +++ + SWNAMI G A +G + +F +M G +PD
Sbjct: 368 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDD 427
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSH+G+++ GR F SM++++ + P +HY CM+DLLG +G EA+ +I
Sbjct: 428 ITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 487
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
M M+PD VIW SLL ACK+H N+ LGE A+ L++IEP N G YVLLSN+YA GRW E
Sbjct: 488 TMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNE 547
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R L+ +G+ K PGCS IEI V+ F++ DK HP N+EIY +L+ + ++ G+
Sbjct: 548 VANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGF 607
Query: 673 VPNASD 678
VP+ S+
Sbjct: 608 VPDTSE 613
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 238/459 (51%), Gaps = 44/459 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +SK+ + +++H ++K ++++ LI +Y + G L A KVF
Sbjct: 90 NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 149
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ +++V ++ ++I G G+I++A ++F +P +D SWN+M+SG+A+ + EAL
Sbjct: 150 DESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALE 209
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N E + + +SACA S ++G QVH+ + + S++ + +ALID+Y
Sbjct: 210 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYS 269
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F+G+ ++++SWN+LI Y +AL +F M+ SG P++VT+ S
Sbjct: 270 KCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 329
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + R + + N L +L+DMYAKCG + A VF+
Sbjct: 330 ILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFN---- 385
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+L +++ SWNA+I G+ +G + + +F +
Sbjct: 386 ---------------------------SILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLI 433
++ + P TF LL+AC++ L LGR H R ++ + + +I
Sbjct: 419 RKNGIEPDDITFVGLLSACSHSGMLDLGR--------HIFRSMTQDYKMTPKLEHYGCMI 470
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
D+ G ++ + TM +E D V W +++ C +G
Sbjct: 471 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 509
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/608 (36%), Positives = 335/608 (55%), Gaps = 67/608 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++PE +Q WN M G A AL +V M S + ++F L +CA
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S FK G Q+H + K + D+Y+ ++LI MY + GR+ A++VFD R++VS
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
WN++I+ Y + G ALE+F MM + ++PDE
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+A+VVSACA + + G Q+H+ + ++L + NAL+D+Y+KCG+
Sbjct: 208 STMATVVSACAQSGSIELGRQVHS-WINDHGFGSNLKIVNALIDLYSKCGE--------- 257
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V++A + + ++V+SWN LI GYT +EAL L
Sbjct: 258 ----------------------VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLL 295
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K + S + SL
Sbjct: 296 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSL--RTSL 353
Query: 433 IDMYMKCGSVEDGCRIFET-MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
IDMY KCG ++ ++ ++ R +WNAMI G A +G A +F +M G +PD
Sbjct: 354 IDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 413
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+T +G+L ACSH+G+++ GR F SM +++ + P +HY CM+DLLG +G EA+ +I
Sbjct: 414 DITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMI 473
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
MPM+PD VIW SLL ACK+H N+ LGE AKKL++IEP N G YVLLSN+YA G+W
Sbjct: 474 NTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWN 533
Query: 612 EVVRVRKLMRKRGVVKQ-PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
EV ++R L+ +G+ K+ PGCS IEI V+ F++ DK HP N+EIY +L+ + ++
Sbjct: 534 EVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEA 593
Query: 671 GYVPNASD 678
G+VP+ S+
Sbjct: 594 GFVPDTSE 601
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 237/454 (52%), Gaps = 39/454 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC +SK+ + +++H ++K F ++++ LI +YA+ G L A+KVFD+ S
Sbjct: 78 FPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS 137
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V ++ ++ITG G+I+ A ++F +P +D SWN+M+SG+A+ + +AL F +
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N E + + +SACA S ++G QVH+ ++ + S++ + +ALID+Y KCG
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A + +G+ ++++SWN+LI Y +AL +F M+ SG P++VT+ S++ A
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 317
Query: 262 CASLAAFKEGLQIHARLMRCEK---LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
CA L A G IH + + K + N L +L+DMYAKCG ++ A V D
Sbjct: 318 CAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSD------ 371
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+ R++ +WNA+I G+ +G A +F +++
Sbjct: 372 ------------------------SSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRK 407
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P TF LL+AC++ L LGR + +R + +ID+
Sbjct: 408 NGIEPDDITFVGLLSACSHSGMLDLGRN-----IFRSMRQDYNITPKLEHYGCMIDLLGH 462
Query: 439 CGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G ++ + TM +E D V W +++ C +G
Sbjct: 463 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 40/307 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S A ++ +C +S S+ R+VH+ I F S + I N LID+Y+KCG + A ++
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +SNK+V +WN++I G+ + + EAL
Sbjct: 266 EGLSNKDVISWNTLI-------------------------------GGYTHMNLYKEALL 294
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGS----A 191
F +M ++ + S L ACA G++D +G +H + K V S +
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAID--IGRWIHVYIDKKLKGVVVTNASSLRTS 352
Query: 192 LIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
LIDMY KCG + A +V D R++ +WN++I + +G A+ A ++F RM +GIEP
Sbjct: 353 LIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 412
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D++T ++SAC+ G I + + + L ++D+ G EA +
Sbjct: 413 DDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEM 472
Query: 311 FDRMPIR 317
+ MP+
Sbjct: 473 INTMPME 479
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 342/632 (54%), Gaps = 58/632 (9%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA +IK+ E F+ + L++VYAKCG + ARKVFD
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFD---------------------- 39
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++P R+ W ++++G+ Q+ + A+ F M S ++ AL+A
Sbjct: 40 ---------NLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNA 90
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C+ +G Q HA + K R S D +G+AL +Y K G + + + F E++++SW
Sbjct: 91 CSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISW 150
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
++I+ NG A L +F+ M+ +EP++ TL SV+S C+++ + G+Q+H+ +
Sbjct: 151 TTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTK 210
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
N L + N+LV +Y KCG ++EA+ +F+RM +N+++ +M++G+A+A +
Sbjct: 211 LGHESN-LRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAK--- 266
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
++ EALG++ L R P +T ++L C+ LA
Sbjct: 267 -----------------DNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAA 309
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G Q H +K G FL SD+ VG +L+DMY KCGS+E + F M R +SW
Sbjct: 310 LEQGEQIHAQTIKSG--FL----SDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISW 363
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
+MI A++G AL LF+ M L G +P+ +T +GVL ACSHAG+V+E +YF M K
Sbjct: 364 TSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQK 423
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
E+ + P+ DHY C+VD+ R G LDEA +I+ M ++P+ IW L+A C+ H N LG
Sbjct: 424 EYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGF 483
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
Y A++LL+++P ++ YV+L NMY RW +V VR+LM++ V K S I I G V
Sbjct: 484 YAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKGEV 543
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+ F ++ H N E++ +L L K +GY
Sbjct: 544 HSFKTNNRLHNHNAELHTLLNDLVDRAKSLGY 575
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 248/543 (45%), Gaps = 98/543 (18%)
Query: 9 QIVGDL----AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++ GD+ +F + + L++C +S++ ++ HA IIK + + + I N L +Y
Sbjct: 67 EVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLY 126
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
+K G L + K F + K+V +W +II+ C N
Sbjct: 127 SKFGSLDSSVKAFRETGEKDVISWTTIISA----------------------CGDNG--- 161
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
R L F++M EN ++++ S LS C+ +G QVH+L +K + S
Sbjct: 162 ------RAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHES 215
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ-----------NGPA 233
++ + ++L+ +Y KCG + A+ +F+ M +N+++WN++I + Q
Sbjct: 216 NLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTG 275
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
++AL +++++ SG +PD TL+S+++ C+ LAA ++G QIHA+ ++ L +D+V+G A
Sbjct: 276 TEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFL-SDVVVGTA 334
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
LVDMY KCG + AR F M R ++S TSM++ +A+
Sbjct: 335 LVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFAR---------------------- 372
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+G+++ AL LF ++ P TF +L AC +H +V
Sbjct: 373 ---------HGQSQHALQLFEDMRLAGFRPNQITFVGVLAAC-----------SHAGMVD 412
Query: 414 HGLRFLSGEESDIFVG------NSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVG 466
L + + + + L+DM+++ G +++ + + M VE + W +I G
Sbjct: 413 EALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
C +G E LG + L KP VL + E + KE +
Sbjct: 473 C--RNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGK 530
Query: 527 LKD 529
LKD
Sbjct: 531 LKD 533
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 316/524 (60%), Gaps = 39/524 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + L C G VHA + +S + D+ MG+ L++MY KCG + AR+VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+R+ V+W +LI+ Y Q+ DAL F +M+ G P+E TL+SV+ A A+ G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H ++C +++ +G+AL+D+Y + G +++A+
Sbjct: 183 LHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQ------------------------- 216
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
L+F + RN VSWNALIAG+ + E+AL LF+ + R+ P+H+++ +L
Sbjct: 217 ------LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC++ L+ G+ H +++K SGE+ F GN+L+DMY K GS+ D +IF+ +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIK------SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+RD VSWN+++ AQ+G+G EA+ F++M G +P+ ++ + VL ACSH+GL++EG
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y+ M K+ G+ P HY +VDLLGRAG L+ A IE MP++P A IW +LL AC++H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N LG Y A+ + E++P + GP+V+L N+YA GRW + RVRK M++ GV K+P CSW
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI +++F+ D+RHP +EI + + ++K +GYVP+ S
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 206/402 (51%), Gaps = 38/402 (9%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S + G D + LL C K + R VHA I++S F +I + N L+++YA
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA 106
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG L ARKV F MP+RD +W +++SG
Sbjct: 107 KCGSLEEARKV-------------------------------FEKMPQRDFVTWTTLISG 135
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
++QHDR +AL +F +M ++ +E++ S + A A G Q+H K + S+
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
V++GSAL+D+Y + G + A+ VFD + RN VSWN+LI + + ALE+F M+
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKL 304
G P + AS+ AC+S ++G +HA +++ EKL GN L+DMYAK G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSI 313
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGY 360
++AR +FDR+ R+VVS S+++ YA+ K A F +M + N +S+ +++
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ +G +E + L+K++ + P + + +++ DL
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A L +C + + + VHA +IKS F N L+D+YAK G ++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH---------- 314
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DA ++F + +RD SWNS+++ +AQH EA+ +F +
Sbjct: 315 ---------------------DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E SF S L+AC+ S G + L+ K + + ++D+ G+ G
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 202 VSCARRVFDGMR-ERNIVSWNSLIT 225
++ A R + M E W +L+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLN 438
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/550 (36%), Positives = 315/550 (57%), Gaps = 39/550 (7%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
++A++ K+ + D Y+ + I R+ A + M N+ +N++I + Q+
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
ALE++V+M+ + + P T S++ AC ++ + +H + R + + +
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWR-NGFDSHVFVQT 119
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG------------------------ 328
+LVD Y+ G++ E+ VFD MP R+V + T+MVSG
Sbjct: 120 SLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLAT 179
Query: 329 -------YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
YA+ V A L+F +M R+++SW +I Y+QN EALG+F + + +
Sbjct: 180 WNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGI 239
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +++ACA+L L LG++ H ++++HG D+++G++LIDMY KCGS
Sbjct: 240 SPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNL------DVYIGSALIDMYAKCGS 293
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
++ +F + E++ WN++I G A +GY EAL +F KM KP+ VT + VL A
Sbjct: 294 LDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSA 353
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAGL+EEGRK F+SM+++H + P +HY CMVDLL +AG L+EA LI M ++P+AV
Sbjct: 354 CNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAV 413
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IWG+LL+ CK+HRN+ + + A KL+ +EP NSG Y LL NM AE+ RWGE ++R M+
Sbjct: 414 IWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMK 473
Query: 622 KRGVVKQ-PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
++GV K+ PG SWIE+ V+ F DK H + EIY +L L +MK GYVP + E
Sbjct: 474 EQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYVPELCEAE 533
Query: 681 AYEEQNGSNS 690
E++ S S
Sbjct: 534 TVEQRRSSIS 543
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 61/372 (16%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F L+ +C + VH + ++ F S +F+Q L+D Y+ G + + +VFD
Sbjct: 80 SYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFD 139
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA----------- 127
+M ++VF W ++++GL++ G + A RLF MP+R+ +WN+++ G+A
Sbjct: 140 EMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELL 199
Query: 128 --------------------QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF 167
Q+ RF EALG F +M + E + + +SACA
Sbjct: 200 FNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGAL 259
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
+G ++H + + ++ DVY+GSALIDMY KCG + + +F +RE+N+ WNS+I
Sbjct: 260 DLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGL 319
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+G A +AL +F +M I+P+ VT SV+SAC +EG + A + R +
Sbjct: 320 AVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPG 379
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ +VD+ +K G L EA +L+ T LE
Sbjct: 380 VEHYGCMVDLLSKAGLLEEA------------------------------LQLIRTMKLE 409
Query: 348 RNVVSWNALIAG 359
N V W AL++G
Sbjct: 410 PNAVIWGALLSG 421
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 202/455 (44%), Gaps = 110/455 (24%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+N++ + N I+ L + +D A + M + +N+M+ GF Q + +AL +V
Sbjct: 10 TNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYV 69
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M N + + Y+F S + AC + VH + ++ + S V++ ++L+D Y G
Sbjct: 70 QMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMG 129
Query: 201 RVSCARRVFDGMRE-------------------------------RNIVSWNSLITCYEQ 229
R+ + RVFD M E RN+ +WN+LI Y +
Sbjct: 130 RIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLIDGYAR 189
Query: 230 ------------NGPASD-------------------ALEVFVRMMASGIEPDEVTLASV 258
PA D AL VF M GI PDEVT+A+V
Sbjct: 190 LREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATV 249
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA L A G +IH +M+ D+ +G+AL+DMYAKCG L DR
Sbjct: 250 ISACAHLGALDLGKEIHYYIMQ-HGFNLDVYIGSALIDMYAKCGSL-------DR----- 296
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+ LMF K+ E+N+ WN++I G +G EEAL +F ++R
Sbjct: 297 -------------------SLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMER 337
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQ-----AHTHVVKHGLRFLSGEESDIFVGNSLI 433
E + P TF ++L+AC + ++ GR+ H + G+ ++
Sbjct: 338 EKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHY----------GCMV 387
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
D+ K G +E+ ++ TM +E + V W A++ GC
Sbjct: 388 DLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGC 422
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A ++ +C ++ + +H I++ F +++I + LID+YAKCG L + +F
Sbjct: 242 DEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMF 301
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
K+ KN+F WNS+I GL V G+A+ EAL
Sbjct: 302 FKLREKNLFCWNSVIEGL--------------------------AVHGYAE-----EALA 330
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMY 196
F KM E + +F S LSAC + + G + A +++ V ++D+
Sbjct: 331 MFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLL 390
Query: 197 GKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
K G + A ++ M+ E N V W +L++
Sbjct: 391 SKAGLLEEALQLIRTMKLEPNAVIWGALLS 420
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 360/671 (53%), Gaps = 79/671 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGC-LYGARKVFDK 79
F LL SC + + A ++K+ F S + + LID++ K G + AR VFDK
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
M +KN+ T W M++ ++Q +A+ F
Sbjct: 208 MQHKNLVT-------------------------------WTLMITRYSQLGLLDDAVDLF 236
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
++ + +++ S LSAC F +G Q+H+ + +S +SDV++G L+DMY K
Sbjct: 237 CRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKS 296
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
V +R++F+ M N++SW +LI+ Y Q+ +A+++F M+ + P+ T +SV+
Sbjct: 297 AAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVL 356
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACASL F G Q+H + ++ L +GN+L++MYA+ G
Sbjct: 357 KACASLPDFGIGKQLHGQTIKL-GLSTINCVGNSLINMYARSG----------------- 398
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+++ AR F + E+N++S+N + +++E+ ++
Sbjct: 399 --------------TMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHT 442
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V + +T+ LL+ A + + G Q H +VK SG +++ + N+LI MY KC
Sbjct: 443 GVGASPFTYACLLSGAACIGTIVKGEQIHALIVK------SGFGTNLCINNALISMYSKC 496
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G+ E ++F M R+ ++W ++I G A++G+ T+AL LF +ML G KP+ VT I VL
Sbjct: 497 GNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVL 556
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH GL++E K+F+SM H ++P +HY CMVDLLGR+G L EA I +MP D
Sbjct: 557 SACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDAD 616
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A++W + L +C+VHRN LGE+ AKK+LE EP + Y+LLSN+YA GRW +V +RK
Sbjct: 617 ALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKS 676
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
M+++ ++K+ G SWIE+ V+ F V D HP ++IY L L ++K +GY+PN
Sbjct: 677 MKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFV 736
Query: 678 ----DDEAYEE 684
+DE E+
Sbjct: 737 LHDVEDEQKEQ 747
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 234/466 (50%), Gaps = 75/466 (16%)
Query: 5 RSVKQIVGDLAFLDSSPFAK---LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLI 61
S+++ + L +SP K LL +C+RS ++ + +H ++I S + + N LI
Sbjct: 22 ESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLI 81
Query: 62 DVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
+Y+KCG A +F M + +RD SW++
Sbjct: 82 TLYSKCGDWENALSIFRNMGHH-----------------------------KRDLVSWSA 112
Query: 122 MVSGFAQHDRFSEALGYFVKMH--SENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLS 178
++S FA + S AL F+ M S N +EY F + L +C+ + F G + A L
Sbjct: 113 IISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLL 172
Query: 179 KSRY-SSDVYMGSALIDMYGKCG-RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
K+ Y S V +G ALIDM+ K G + AR VFD M+ +N+V+W +IT Y Q G DA
Sbjct: 173 KTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDA 232
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++F R++ S PD+ TL S++SAC L F G Q+H+ ++R L +D+ +G LVD
Sbjct: 233 VDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIR-SGLASDVFVGCTLVD 291
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAK + +R +F+ M NV+S T+++SGY
Sbjct: 292 MYAKSAAVENSRKIFNTMLHHNVMSWTALISGY--------------------------- 324
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
Q+ + +EA+ LF + V P +TF ++L ACA+L D +G+Q H +K GL
Sbjct: 325 ----VQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGL 380
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
++ VGNSLI+MY + G++E + F + E++ +S+N
Sbjct: 381 STINC------VGNSLINMYARSGTMECARKAFNILFEKNLISYNT 420
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 201/398 (50%), Gaps = 46/398 (11%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM--RER 215
L AC S + ++G +H L S D + ++LI +Y KCG A +F M +R
Sbjct: 46 LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASG---IEPDEVTLASVVSACASLAAFKEGL 272
++VSW+++I+C+ N S AL F+ M+ I P+E +++ +C++ F GL
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCG-KLNEARCVFDRMPIRNVVSETSMVSGYAK 331
I A L++ + + +G AL+DM+ K G + AR VFD+M +N+V+ T M++ Y++
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQ 225
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ A +F ++ L++ YT P +T +L
Sbjct: 226 LGLLDDAVDLFCRL----------LVSEYT---------------------PDKFTLTSL 254
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L+AC L LG+Q H+ V++ GL SD+FVG +L+DMY K +VE+ +IF T
Sbjct: 255 LSACVELEFFSLGKQLHSWVIRSGL------ASDVFVGCTLVDMYAKSAAVENSRKIFNT 308
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ + +SW A+I G Q+ EA+ LF ML P+ T VL AC A L + G
Sbjct: 309 MLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC--ASLPDFG 366
Query: 512 -RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
K + + GL+ + ++++ R+G ++ A+
Sbjct: 367 IGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 19 SSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+SPF A LL ++ ++HA I+KS F + + I N LI +Y+KCG A +V
Sbjct: 446 ASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSGFAQHDRF 132
F+ M +NV TW SII+G K GF A LF M E ++ ++ +++S +
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565
Query: 133 SEALGYFVKMH 143
EA +F MH
Sbjct: 566 DEAWKHFNSMH 576
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL AC +L+LG+ H ++ GL D + NSLI +Y KCG E+ IF
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPL------DSVLLNSLITLYSKCGDWENALSIFR 98
Query: 451 TM--VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHA 505
M +RD VSW+A+I A N + AL F ML C P+ +L +CS+
Sbjct: 99 NMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNP 158
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTC----MVDLLGRAGC-LDEAKTLIEAMPMQPDA 560
G F+ + K D + C ++D+ + G + A+ + + M +
Sbjct: 159 LFFTTGLAIFAFLLKTGYF----DSHVCVGCALIDMFTKGGLDIQSARMVFDKM-QHKNL 213
Query: 561 VIW 563
V W
Sbjct: 214 VTW 216
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 336/591 (56%), Gaps = 12/591 (2%)
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V NS+++ L+ G ++ A LF +M RD SWN++++G+A + + +AL F +
Sbjct: 219 EDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF 278
Query: 143 HS-ENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCG 200
S E + S L ACA + ++ +H ++ D +G+AL+ Y KC
Sbjct: 279 ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCN 338
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A + F + ++++SWN+++ + ++G + + + M+ GI PD +T+ +++
Sbjct: 339 YTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQ 398
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDL--VLGNALVDMYAKCGKLNEARCVFDRMP-IR 317
A+++ K+ + H+ +R L+ D LGN ++D YAKCG + A +F + R
Sbjct: 399 YYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 458
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NVV+ SM+SGY +SS A +F M E ++ +WN ++ Y +N ++AL LF L+
Sbjct: 459 NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 518
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA++A + + RQ H +V++ +D+ + + IDMY
Sbjct: 519 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-------NDVRLNGAFIDMYS 571
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGSV ++F + ++D V + AM+ G A +G G EAL +F ML G KPDHV +
Sbjct: 572 KCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITA 631
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHAGLV+EG K F+S+ K HG P + Y C+VDLL R G + +A T + MP++
Sbjct: 632 VLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIE 691
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A IWG+LL AC+ H + LG VA L +IE N G YV++SN+YA RW V+ +R
Sbjct: 692 ANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIR 751
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+LMR R + K GCSWIE+ NVF+ D HP IY L L + MK
Sbjct: 752 RLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQLMK 802
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/623 (26%), Positives = 275/623 (44%), Gaps = 136/623 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL-YGARKV 76
+S A +L C R + + + VH+ +IKS S N LI +YAKCG + A
Sbjct: 80 NSVTIAIVLPVCARLREDAG-KSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAA 138
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+++ K+V +WN++I G + F ++A +LF ++M+ G Q
Sbjct: 139 FNRIEFKDVVSWNAVIAGFSENKFTEEAFKLF-----------HAMLKGPIQ-------- 179
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHA-LLSKSRYSSDVYMGSAL 192
N+A + S L CA + ++ G +VH +L + DV + ++L
Sbjct: 180 --------PNYA----TIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSL 227
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPD 251
+ Y + G++ A +F M+ R++VSWN++I Y NG ALE+F ++ I+PD
Sbjct: 228 MSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPD 287
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VTL SV+ ACA + + IH ++R LR D +GNAL+ YAKC A F
Sbjct: 288 SVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTF 347
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
LM ++ ++++SWNA++ +T++G +
Sbjct: 348 ----------------------------LMISR---KDLISWNAILDAFTESGCETHLVN 376
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
L + RE + P T ++ A ++ ++ ++ H++ ++ GL L G+ +GN
Sbjct: 377 LLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGL--LQGDAGPT-LGNG 433
Query: 432 LIDMYMKCGSV--------------------------------EDGCRIFETMVERDWVS 459
++D Y KCG++ +D IF TM E D +
Sbjct: 434 MLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTT 493
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK------ 513
WN M+ A+N + +AL LF ++ G KPD VT++ +L AC+H V R+
Sbjct: 494 WNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVI 553
Query: 514 -----------YFSSMSKEHG----------LAPLKD--HYTCMVDLLGRAGCLDEAKTL 550
F M + G +P KD +T MV G +EA +
Sbjct: 554 RACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRI 613
Query: 551 IEAM---PMQPDAVIWGSLLAAC 570
M ++PD VI ++L AC
Sbjct: 614 FSYMLELGVKPDHVIITAVLFAC 636
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 224/444 (50%), Gaps = 57/444 (12%)
Query: 88 WNSIITGLL----KWGFIDDASRLFASMPERDQCSWNSMVSG---FAQHDRFSEALGYFV 140
++S+ GLL K G +D ++LF M +RD WN ++SG F H+ +E + F
Sbjct: 12 YDSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHE--AEVMRLFR 69
Query: 141 KMHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
MH N A + + L CA + G VH+ + KS S G+ALI MY KC
Sbjct: 70 AMHMVNEAKPNSVTIAIVLPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKC 128
Query: 200 GRV-SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G V S A F+ + +++VSWN++I + +N +A ++F M+ I+P+ T+AS+
Sbjct: 129 GLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASI 188
Query: 259 VSACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+ CASL A ++ G ++H ++R +L D+ + N+L+ Y + G++ +A +F M
Sbjct: 189 LPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMK 248
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-R 374
R++VS ++++GYA NGE +AL LF
Sbjct: 249 SRDLVSWNAIIAGYA-------------------------------SNGEWLKALELFSE 277
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH-GLRFLSGEESDIFVGNSLI 433
+ E++ P T ++L ACA++ +LQ+ + H ++++H GLR D VGN+L+
Sbjct: 278 FISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLR------EDTSVGNALL 331
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
Y KC + + F + +D +SWNA++ ++G T + L ML G +PD +
Sbjct: 332 SFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSI 391
Query: 494 TMIGVL---CACSHAGLVEEGRKY 514
T++ ++ A S V+E Y
Sbjct: 392 TILTIIQYYAAVSRVKKVKETHSY 415
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 184/443 (41%), Gaps = 54/443 (12%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAKCGCLYGARKV 76
DS +L +C ++ + +H II+ + + N L+ YAKC A +
Sbjct: 287 DSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQT 346
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRF 132
F +S K++ +WN+I+ + G L M D + +++ +A R
Sbjct: 347 FLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRV 406
Query: 133 SEALGYFVKMHSENFALSEYSFGSA-----LSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ +S F L + G L A A + K + LS+ R +V
Sbjct: 407 KKVKE--THSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR---NVV 461
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+++I Y A +F+ M E ++ +WN ++ Y +N AL +F + G
Sbjct: 462 TCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG 521
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++PD VT+ S++ ACA +A+ Q H ++R ND+ L A +DMY+KCG + A
Sbjct: 522 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA--CFNDVRLNGAFIDMYSKCGSVFGA 579
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQN 363
+F P +++V T+MV G+A + A +F+ MLE V V A++ +
Sbjct: 580 YKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHA 639
Query: 364 GENEEALGLFR--------------------LLKRESVCPTHYTF-------------GN 390
G +E +F LL R YTF G
Sbjct: 640 GLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGT 699
Query: 391 LLNACANLADLQLGRQAHTHVVK 413
LL AC +++LGR H+ K
Sbjct: 700 LLGACRTHHEVELGRVVADHLFK 722
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/703 (32%), Positives = 361/703 (51%), Gaps = 119/703 (16%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N+L+ +K G + ARK+FD+M ++ +TWN +I+ G + +A +LF P +
Sbjct: 41 NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSI 100
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
+W+S+VSG+ ++ E L F +M S+ S+Y+ GS L AC+ G +H
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDA 236
K + +++++ + L+DMY KC + A +F + +R N V W +++T Y QNG + A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
++ F M G+E + T S+++AC S++A+ G Q+H ++ ++ + +ALVD
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCII-WSGFGPNVYVQSALVD 279
Query: 297 MYAKC-------------------------------GKLNEARCVFDRMPIRNV------ 319
MYAKC G + EA +F +M R++
Sbjct: 280 MYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFT 339
Query: 320 ---------------------------------VSETSMVSGYAKASSVKSARLMFTKML 346
++V YAK ++ A +F K+L
Sbjct: 340 YPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+++V+SW +L+ GY NG +E+AL LF ++ V + + +ACA L ++ GRQ
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H + +K S S + NSLI MY KCG +ED R+ ++M R+ +SW A+IVG
Sbjct: 460 VHANFIK------SSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVG 513
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQNG LVE G+ YF SM K +G+ P
Sbjct: 514 YAQNG-----------------------------------LVETGQSYFESMEKVYGIKP 538
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
D Y CM+DLLGRAG ++EA+ L+ M ++PDA IW SLL+AC+VH N+ LGE K L
Sbjct: 539 ASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNL 598
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
+++EPSNS PYVLLSNM++ GRW + +R+ M+ G+ ++PG SWIE+ V+ F+ +
Sbjct: 599 IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISE 658
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
D+ HPL EIY + + +K G+VP+ + D+EA E
Sbjct: 659 DRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKE 701
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 219/436 (50%), Gaps = 47/436 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + + R+VH II S F +++Q+ L+D+YAKCG L AR + D M
Sbjct: 239 FPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME 298
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V WNS+I G + G++++A LF K
Sbjct: 299 IDDVVCWNSMIVGCVTHGYMEEALVLFH-------------------------------K 327
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH+ + + ++++ S L + A + K+G VH+L K+ + + + +AL+DMY K G
Sbjct: 328 MHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGN 387
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+SCA VF+ + +++++SW SL+T Y NG AL++F M + ++ D+ +A V SA
Sbjct: 388 LSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSA 447
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L + G Q+HA ++ + L N+L+ MYAKCG L +A V D M RNV+S
Sbjct: 448 CAELTVIEFGRQVHANFIK-SSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVIS 506
Query: 322 ETSMVSGYAKASSVKSARLMFTKM-----LERNVVSWNALIAGYTQNGENEEALGLFRLL 376
T+++ GYA+ V++ + F M ++ + +I + G+ EA LL
Sbjct: 507 WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAE---HLL 563
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
R V P + +LL+AC +L+LG +A +++K E S+ L +M+
Sbjct: 564 NRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKL-------EPSNSLPYVLLSNMF 616
Query: 437 MKCGSVEDGCRIFETM 452
G ED I M
Sbjct: 617 SVAGRWEDAAHIRRAM 632
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 127/301 (42%), Gaps = 68/301 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + +L S K++ VH+ IK+ F + + N L+D+YAK G L A V
Sbjct: 335 IDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDV 394
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+K+ +K+V +W S++TG + GF H++ AL
Sbjct: 395 FNKILDKDVISWTSLVTGYVHNGF----------------------------HEK---AL 423
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M + L ++ SACA + G QVHA KS S + ++LI MY
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTL 255
KCG + A RV D M RN++SW ++I Y QNG F M GI+P
Sbjct: 484 AKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP----- 538
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AS AC ++D+ + GK+NEA + +RM
Sbjct: 539 ASDRYAC-------------------------------MIDLLGRAGKINEAEHLLNRMD 567
Query: 316 I 316
+
Sbjct: 568 V 568
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A + +C + R+VHA IKS S + +N LI +YAKCGCL A +V
Sbjct: 436 LDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRV 495
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM-------PERDQCSWNSMVSGFAQH 129
D M +NV +W +II G + G ++ F SM P D+ + M+ +
Sbjct: 496 XDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDR--YACMIDLLGRA 553
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV-YM 188
+ +EA +M E A + S LSAC + ++G + L K S+ + Y+
Sbjct: 554 GKINEAEHLLNRMDVEPDAT---IWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYV 610
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNI 217
L +M+ GR A + M+ I
Sbjct: 611 --LLSNMFSVAGRWEDAAHIRRAMKTMGI 637
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 310/518 (59%), Gaps = 7/518 (1%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN M+ G ++ DR ++A+ ++ M+ + S +F +CA D + G V
Sbjct: 81 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSM 140
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K + S +++ +ALI MY G ++ A++VFDGM ER++VSWNS+I Y Q L+
Sbjct: 141 KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLD 200
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M A + D VT+ +SA L+ ++ G + + + + DL LGN L+DMY
Sbjct: 201 LFREMQAINVRADSVTMMKAISATCFLSEWEMGDYL-VKYIDEHGVVVDLYLGNTLIDMY 259
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+ G ++ A VF +M +N+VS +M+ GYAK ++ +A+ +F +M R+V+SW ++I
Sbjct: 260 GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMII 319
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY+ ++ EA+ LF+ + V P T L+ACA+L L G H ++ KH ++
Sbjct: 320 GYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIK- 378
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
SD+FVGNSLIDMY KCG VE ++F M RD VSW ++I G A NG+ AL
Sbjct: 379 -----SDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALN 433
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F +ML G P H T +GVL AC+H GLV++G ++F SM + LAP HY C+VDLL
Sbjct: 434 VFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDLL 493
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
R+G LD A I+ MP+ PD VIW LL+ACK+H N++L E V+KKLL ++PSN+G YV
Sbjct: 494 CRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNYV 553
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
L S+ YA RW +V+++RKLM + K S IE+
Sbjct: 554 LSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 591
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 228/496 (45%), Gaps = 100/496 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L SC R V + V +K F S +F+ N LI +Y G L A+KVFD
Sbjct: 116 FIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFD--- 172
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M ERD SWNS++ G+ Q +RF + L F +
Sbjct: 173 ----------------------------GMLERDVVSWNSIICGYYQFNRFKKVLDLFRE 204
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + N + A+SA +++MG + + + D+Y+G+ LIDMYG+ G
Sbjct: 205 MQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGM 264
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD-------------- 235
+ A RVF M+E+NIVSWN++I Y + G P+ D
Sbjct: 265 IDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLA 324
Query: 236 -----ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
A+++F MM S ++PDE+T+A+ +SACA L + G +H + R +++D+ +
Sbjct: 325 KQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI-RKHDIKSDVFV 383
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GN+L+DMY KCG + +A VF+ M R+ VS TS++SG A
Sbjct: 384 GNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLA-------------------- 423
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
NG E AL +F + +E +CPTH TF +L ACA++ + G + H
Sbjct: 424 -----------VNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFK 471
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQ 469
+++ R L+ E ++D+ + G ++ + M + D V W ++ C
Sbjct: 472 SMENTYR-LAPEMKHY---GCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 527
Query: 470 NGYGTEALGLFKKMLL 485
+G A + KK+L+
Sbjct: 528 HGNLVLAEIVSKKLLV 543
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 201/453 (44%), Gaps = 72/453 (15%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR-VSCARRVFDG 211
+F + A + S ++HA L +++ D S +I Y + + A VF+
Sbjct: 13 TFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQ 72
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
++ ++ WN +I ++ +DA+ + M GI+ +T + +CA ++ ++G
Sbjct: 73 IQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQG 132
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+ M+ + L + NAL+ MY G+L A+ VFD M R+VVS S++ GY +
Sbjct: 133 QMVRVHSMKL-GFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQ 191
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
+ K + L LFR ++ +V T
Sbjct: 192 FNRFK-------------------------------KVLDLFREMQAINVRADSVTMMKA 220
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
++A L++ ++G ++ +HG+ D+++GN+LIDMY + G ++ R+F
Sbjct: 221 ISATCFLSEWEMGDYLVKYIDEHGVVV------DLYLGNTLIDMYGRRGMIDFAGRVFYQ 274
Query: 452 MVERDWVSWNAMIVGCAQNG-------------------------------YGTEALGLF 480
M E++ VSWNAMI+G A+ G EA+ LF
Sbjct: 275 MKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLF 334
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
++M++ KPD +T+ L AC+H G ++ G + K H + ++D+ +
Sbjct: 335 QEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDIKSDVFVGNSLIDMYCK 393
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
G +++A + M + D+V W S+++ V+
Sbjct: 394 CGVVEKALQVFNDMKTR-DSVSWTSIISGLAVN 425
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 321 SETSMVSGYA-KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S + ++ YA S+ A +F ++ ++ WN +I G +++ +A+ + + +
Sbjct: 48 SISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYK 107
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ +H TF L +CA ++D++ G+ H +K G ES +FV N+LI MY+
Sbjct: 108 GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGF------ESYLFVSNALIHMYVCF 161
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + ++F+ M+ERD VSWN++I G Q + L LF++M + D VTM+ +
Sbjct: 162 GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAI 221
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQ 557
A E G Y EHG+ + D Y ++D+ GR G +D A + M +
Sbjct: 222 SATCFLSEWEMG-DYLVKYIDEHGV--VVDLYLGNTLIDMYGRRGMIDFAGRVFYQMK-E 277
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
+ V W +++ N++ AKKL PS
Sbjct: 278 KNIVSWNAMIMGYAKVGNLV----AAKKLFNEMPS 308
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L +C S+ VH I K S++F+ N LID+Y KCG + A +VF
Sbjct: 345 DEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVF 404
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ M ++ +W SII+GL GF + A +F M + C + G
Sbjct: 405 NDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVG 452
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/639 (36%), Positives = 333/639 (52%), Gaps = 76/639 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C + V R VH ++K F S++F+ N L+ Y CG L
Sbjct: 40 DDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGL------- 92
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD-RFSEAL 136
DA R+F MPE+D SWN+M+ F+ + + +AL
Sbjct: 93 ------------------------RDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M E + + S L FK G +VH + SD+++ ++LIDMY
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + A VF + +N+VSWN++I + QN A+ + +M G P+ VT
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248
Query: 257 SVVSACASLAAFKEGLQIHAR--LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+V+ ACA + + G +IHAR M C DL + NAL DMYAK G L AR VFD
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAF---DLFVSNALTDMYAKSGHLKLARNVFD-- 303
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
TS+ R+ VS+N LI G++Q + E+L LF
Sbjct: 304 --------TSL----------------------RDEVSYNILIVGHSQTSDCSESLSLFS 333
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ + + +F L+ACANL ++ G++ H +++ +FV NSL+D
Sbjct: 334 EMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHI------HLFVANSLLD 387
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KCG + IF+ M +D SWN MI+G G A+ LF+ M + D V+
Sbjct: 388 FYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVS 447
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I VL ACSH GL+E+GRKYF + K G+ P + HY CMVDLLGRAG ++EA LI+ +
Sbjct: 448 FIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGL 506
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P+ PDA IWG+LL AC+++ N+ L + A+ L E++P +SG Y LLSNMYAE GRW E
Sbjct: 507 PIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEAN 566
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
R+R+LM+ RGV K PGCSW++I + F+V +K L+
Sbjct: 567 RIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLD 605
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 236/469 (50%), Gaps = 60/469 (12%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WN+++ G++ L + +M +++F L ACA + + + G +VH +
Sbjct: 10 WNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG-PASDAL 237
K + SDV++G+ L+ YG CG + A RVFD M E+++VSWN++I + NG DAL
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++F M+ G++P+ +T++S + L FK G ++H +R L +D+ + N+L+DM
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRM-GLESDIFIANSLIDM 187
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
YAK G EA VF ++ +NVV SWNA+I
Sbjct: 188 YAKSGHSTEASNVFYKLDAKNVV-------------------------------SWNAMI 216
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
A + QN A+GL R ++ P TF N+L ACA + ++ G++ H + G
Sbjct: 217 ANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCA 276
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
F D+FV N+L DMY K G ++ +F+T + RD VS+N +IVG +Q +E+L
Sbjct: 277 F------DLFVSNALTDMYAKSGHLKLARNVFDTSL-RDEVSYNILIVGHSQTSDCSESL 329
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY------ 531
LF +M L G K D+V+ +G L AC++ +++G++ HG K +
Sbjct: 330 SLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEI-------HGFLLRKLFHIHLFVA 382
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
++D + G + A+ + + M D W +++ MLGE
Sbjct: 383 NSLLDFYTKCGRIGLARNIFDRMT-NKDVASWNTMILGYG-----MLGE 425
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 141/283 (49%), Gaps = 17/283 (6%)
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN LI GY+ G L ++ + R V P +TF +L ACA+ +++ GR+ H VV
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K G ESD+FVGN+L+ Y CG + D R+F+ M E+D VSWN MI + NG+
Sbjct: 69 KLGF------ESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGW 122
Query: 473 G-TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+AL +F+ M+ G KP+ +T+ L + GR+ S S GL
Sbjct: 123 HYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGS-SIRMGLESDIFIA 181
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI-E 590
++D+ ++G EA + + + + V W +++A +R ++ + +++ + E
Sbjct: 182 NSLIDMYAKSGHSTEASNVFYKLDAK-NVVSWNAMIANFAQNRFELVAVGLVRQMQDYGE 240
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
NS V +N+ R G +VR K + R + GC++
Sbjct: 241 LPNS---VTFTNVLPACARMG-LVRPGKEIHARSI--HMGCAF 277
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 336/591 (56%), Gaps = 12/591 (2%)
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V NS+++ L+ G ++ A LF +M RD SWN++++G+A + + +AL F +
Sbjct: 280 EDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF 339
Query: 143 HS-ENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCG 200
S E + S L ACA + ++ +H ++ D +G+AL+ Y KC
Sbjct: 340 ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCN 399
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A + F + ++++SWN+++ + ++G + + + M+ GI PD +T+ +++
Sbjct: 400 YTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQ 459
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDL--VLGNALVDMYAKCGKLNEARCVFDRMP-IR 317
A+++ K+ + H+ +R L+ D LGN ++D YAKCG + A +F + R
Sbjct: 460 YYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 519
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NVV+ SM+SGY +SS A +F M E ++ +WN ++ Y +N ++AL LF L+
Sbjct: 520 NVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 579
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA++A + + RQ H +V++ +D+ + + IDMY
Sbjct: 580 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-------NDVRLNGAFIDMYS 632
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGSV ++F + ++D V + AM+ G A +G G EAL +F ML G KPDHV +
Sbjct: 633 KCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITA 692
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHAGLV+EG K F+S+ K HG P + Y C+VDLL R G + +A T + MP++
Sbjct: 693 VLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIE 752
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A IWG+LL AC+ H + LG VA L +IE N G YV++SN+YA RW V+ +R
Sbjct: 753 ANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIR 812
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+LMR R + K GCSWIE+ NVF+ D HP IY L L + MK
Sbjct: 813 RLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQLMK 863
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 238/503 (47%), Gaps = 78/503 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL SC+ ++ +H +K S + L+++YAK G L K+F +M
Sbjct: 42 LAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMD 101
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ WN +++GL +GF H+ +E + F
Sbjct: 102 QRDPVIWNIVLSGL----------------------------AGFQSHE--AEVMRLFRA 131
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
MH N A + + L CA + G VH+ + KS S G+ALI MY KCG
Sbjct: 132 MHMVNEAKPNSVTIAIVLPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCG 190
Query: 201 RV-SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
V S A F+ + +++VSWN++I + +N +A ++F M+ I+P+ T+AS++
Sbjct: 191 LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASIL 250
Query: 260 SACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
CASL A ++ G ++H ++R +L D+ + N+L+ Y + G++ +A +F M
Sbjct: 251 PVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKS 310
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RL 375
R++VS ++++GYA NGE +AL LF
Sbjct: 311 RDLVSWNAIIAGYA-------------------------------SNGEWLKALELFSEF 339
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH-GLRFLSGEESDIFVGNSLID 434
+ E++ P T ++L ACA++ +LQ+ + H ++++H GLR D VGN+L+
Sbjct: 340 ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLR------EDTSVGNALLS 393
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KC + + F + +D +SWNA++ ++G T + L ML G +PD +T
Sbjct: 394 FYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSIT 453
Query: 495 MIGVL---CACSHAGLVEEGRKY 514
++ ++ A S V+E Y
Sbjct: 454 ILTIIQYYAAVSRVKKVKETHSY 476
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C SV R+ H +I++ F +++ + ID+Y+KCG ++GA K+F
Sbjct: 586 DIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLF 644
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
K++ + +++ G G ++A R+F+ M E
Sbjct: 645 LSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLE 680
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/570 (37%), Positives = 330/570 (57%), Gaps = 43/570 (7%)
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D SWNS+++ A+ +EAL F M + + SF A+ AC+ D G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
Y SD+++ SALI MY CG++ AR+VFD + +R+IVSW S+I Y+ NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159
Query: 235 DALEVFVRMMASGIEPDE------VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F ++ + D+ + L SV+SAC+ + A IH+ +++ +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK-RGFDRGV 218
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+GN L+D YAK G+ V AR +F +++++
Sbjct: 219 SVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIVDK 249
Query: 349 NVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+ VS+N++++ Y Q+G + EA +FR L+K + V T +L A ++ L++G+
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V++ GL E D+ VG S+IDMY KCG VE + F+ M ++ SW AMI G
Sbjct: 310 HDQVIRMGL------EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+G+ +AL LF M+ G +P+++T + VL ACSHAGL EG ++F++M G+ P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CMVDLLGRAG L +A LI+ M M+PD++IW SLLAAC++H+N+ L E +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++ SN G Y+LLS++YA+ GRW +V RVR +M+ RG+VK PG S +E+ G V+VF++ D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ HP ++IY L L R++ GYV N S
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 212/411 (51%), Gaps = 26/411 (6%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S ++ DLA S A L S +R S+ TR S F I + L D+++
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTR--------SSFPCAIKACSSLFDIFS 94
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
++ F ++F +++I G ++DA ++F +P+RD SW SM+ G
Sbjct: 95 GKQT---HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRG 151
Query: 126 FAQHDRFSEALGYF----VKMHSENFALSEYSFG--SALSACAGSVDFKMGTQVHALLSK 179
+ + +A+ F V + ++ A+ S G S +SAC+ + +H+ + K
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 180 SRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ V +G+ L+D Y K G V+ AR++FD + +++ VS+NS+++ Y Q+G +++A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 238 EVFVRMMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
EVF R++ + + + +TL++V+ A + A + G IH +++R L +D+++G +++D
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIID 330
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVS 352
MY KCG++ AR FDRM +NV S T+M++GY A +F M++ N ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 353 WNALIAGYTQNGENEEALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQ 402
+ +++A + G + E F +K R V P +G +++ LQ
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 167/338 (49%), Gaps = 33/338 (9%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC--GCL 70
D FLDS ++ +C R + T +H+ +IK F + + N L+D YAK G +
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
ARK+FD++ +K+ ++NSI++ + G ++A +F + + ++N++
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI-------- 288
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+ + L A + S ++G +H + + DV +G+
Sbjct: 289 ----------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++IDMY KCGRV AR+ FD M+ +N+ SW ++I Y +G A+ ALE+F M+ SG+ P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T SV++AC+ EG + + + L +VD+ + G L +A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 311 FDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
RM ++ + + +S+++ +V+ A + ++ E
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 341 MFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +++ +V SWN++IA ++G++ EAL F +++ S+ PT +F + AC++L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
D+ G+Q H F+ G +SDIFV ++LI MY CG +ED ++F+ + +RD VS
Sbjct: 91 DIFSGKQTHQQA------FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVS 144
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH------VTMIGVLCACSHA---GLVE 509
W +MI G NG +A+ LFK +L+ D + ++ V+ ACS GL E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/662 (33%), Positives = 350/662 (52%), Gaps = 47/662 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL SC +S S+ +++H II S + F+ ++L+ Y+ L A + + N
Sbjct: 85 LLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVE---TSN 141
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+F CSWN +++ + +H + A+ + +M S
Sbjct: 142 LFR----------------------------PCSWNILITSYVKHKLYEAAILAYKQMVS 173
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++F S L AC + + K G +VH ++ +++ +ALI MYG+CG V
Sbjct: 174 KGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDT 233
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +FD M ER+ VSWNS+I+CY G +A E+F M + +E + VT + C
Sbjct: 234 ARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLR 293
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC--VFDRMPIRNV--- 319
+ F + L++ ++ MR + D V A++ C + R IR+
Sbjct: 294 VGNFTQALKLLSQ-MRNFGIHLDDV---AMIIGLGACSHIGAIRLGKEIHGFTIRHYHHM 349
Query: 320 --VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ ++V+ YA+ ++ A ++F +++ ++WN++++G T G EEAL LFR L
Sbjct: 350 LSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELL 409
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P + TF ++L CA +ADLQ GR+ H ++ KH + + N+L+DMY
Sbjct: 410 LFGVEPDYVTFASILPLCARVADLQHGREFHCYITKH-----RDFRDHLLLWNALVDMYA 464
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+ G V + RIF ++ ++D V++ ++I G G G +A+ LF++M KPDH+TMI
Sbjct: 465 RAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIA 524
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH+GLV + F+ M HGL+P +HY CM DL GR G L++AK +I MP +
Sbjct: 525 VLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYR 584
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P + IW +L+ AC +H N+ +GE+ A+KLLE+ P +SG YVL++NMYA G W ++ +R
Sbjct: 585 PTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIR 644
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
LMR GV K PGCSW+++ F V D P E L+L L MK + S
Sbjct: 645 TLMRDSGVAKIPGCSWVDVGSEFISFSVGDTSSPQALESKLLLDSLYDVMKHGSLIMTDS 704
Query: 678 DD 679
D
Sbjct: 705 YD 706
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 224/495 (45%), Gaps = 53/495 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ+V D+ F +L +C ++++ VH I +F+ N LI +Y +C
Sbjct: 169 KQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRC 228
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMV 123
G + AR +FD M ++ +WNS+I+ G +A LF SM E + +WN +
Sbjct: 229 GEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIA 288
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
G + F++AL +M + L + + L AC+ ++G ++H + +
Sbjct: 289 GGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHH 348
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ +AL+ MY +C + A +F +++ ++WNS+++ G +AL +F +
Sbjct: 349 MLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFREL 408
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ G+EPD VT AS++ CA +A + G + H + + R+ L+L NALVDMYA+ GK
Sbjct: 409 LLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGK 468
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
++EA+ +F + ++ V+ TS LIAGY
Sbjct: 469 VSEAKRIFYSLSKKDEVTYTS-------------------------------LIAGYGMQ 497
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACA-----NLADLQLGRQAHTHVVKHGLRF 418
GE +A+ LF +KR + P H T +L+AC+ N A+L H + L
Sbjct: 498 GEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEH 557
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEAL 477
+ + D++ + G + I M R + W +I C +G +
Sbjct: 558 YA----------CMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCI--HGNMDI 605
Query: 478 GLFKKMLLCGEKPDH 492
G + L +P+H
Sbjct: 606 GEWAAEKLLEMRPEH 620
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/672 (33%), Positives = 355/672 (52%), Gaps = 35/672 (5%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + S +LL C +S+ ++HA ++ F+ + ++LI Y C G R
Sbjct: 6 AVVASRHVLELLRQC---RSIQHLDQIHAHLVVHGFSDVSSVASQLIASY--CTLSAGDR 60
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
G + A RLF +PE D+ +N++V ++ D E
Sbjct: 61 D-----------------------GGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQE 97
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL + +E++ L AC + H ++ K + +++ +AL+
Sbjct: 98 ALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLH 157
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+ G + +RR F M +RN+VSWN++I Y Q G S+A +F M G+ D T
Sbjct: 158 FHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFT 217
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L S++ AC+S + G +H ++ R D +LGNAL+DMY KCG L A FD M
Sbjct: 218 LVSLLFACSSEGNLEVGRLVHCHML-VSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMM 276
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
PI+NVV+ TSM+ AK SV + R F +M ERN+VSWNA+I+ Y Q G E L L+
Sbjct: 277 PIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYN 336
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ + P +T +L+AC DL G+ H +V + + + + NSL+D
Sbjct: 337 RMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRD------NFNDPGVTLLNSLLD 390
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY +CG V+ +F M ++ +SWN +I A +G E + F+ M+ PD +T
Sbjct: 391 MYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEIT 450
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+G+L ACSH GL+E G YF +M++ + + P +HY CMVDLLGR G L +A LI+ M
Sbjct: 451 FVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDM 510
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
++PD V+WG+LL AC++H N+ +G+ V K+LLE+E G +VL+ N++ E +W ++
Sbjct: 511 SIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMK 570
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
++RKLM+++G K G S IE+ ++ F V+D RH EIY + L+ + + +
Sbjct: 571 KLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIYAAVDQLSYHLVSLHVLA 630
Query: 675 NASDDEAYEEQN 686
++ EE+N
Sbjct: 631 VQPEELIGEERN 642
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/729 (31%), Positives = 365/729 (50%), Gaps = 107/729 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D++ F LL C +K+V RRVH + F + LI +YA+CG + A++VF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + K+VF +W M+ + Q + ALG
Sbjct: 64 EILERKDVF-------------------------------AWTRMIGIYCQQGDYDRALG 92
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E+ ++ ++ + L+ACA + K G ++H + + + DV++G+ALI+MY
Sbjct: 93 MFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYN 152
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A F + R++VSW ++I Q+ + A ++ RM G+ P+++TL +
Sbjct: 153 KCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYT 212
Query: 258 VVSACASLAAFKEGLQIH------------------------------ARLMRCEKLRND 287
V +A EG I+ AR + + + D
Sbjct: 213 VFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRD 272
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPI------------------------------- 316
+V N ++ Y + EA +F R+
Sbjct: 273 VVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHE 332
Query: 317 --------RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
R+VV T+++S Y + + A +F M ++V++W + Y QNG +E
Sbjct: 333 LVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKE 392
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
AL LF+ ++ E PT T +L+ CA+LA LQ GRQ H+H++++G R ++ V
Sbjct: 393 ALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRM------EMVV 446
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
+LI+MY KCG + + +FE M +RD + WN+M+ AQ+GY E L LF +M L GE
Sbjct: 447 ETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGE 506
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
K D V+ + VL A SH+G V +G +YF +M ++ + P + Y C+VDLLGRAG + EA
Sbjct: 507 KADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAV 566
Query: 549 TLIEAMP-MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
++ + PD ++W +LL AC+ H + A+++LE +PS+SG YV+LSN+YA
Sbjct: 567 DIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAA 626
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W V R+RKLMR RGV K+PG S IEIL V+ F+ D+ HP IY L +L EM
Sbjct: 627 GDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEM 686
Query: 668 KRVGYVPNA 676
+ GY+P+
Sbjct: 687 RAAGYIPDT 695
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/527 (39%), Positives = 309/527 (58%), Gaps = 10/527 (1%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F L CA ++H+ + K+ + + + L+D+YGKCG + A ++FD M
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGL 272
R+ VSW S++T + + L + M G++PD A +V AC+SL + G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HAR M +D V+ ++L+DMY KCG+ +EAR VFD + +N VS TSM+SGYA++
Sbjct: 126 QVHARFM-LSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARS 184
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNL 391
A +F + RN+ SW ALI+G Q+G + LF ++RE + ++
Sbjct: 185 GRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ CANLA L+LG+Q H GL G ES +F+ N+L+DMY KC + IF
Sbjct: 245 VGGCANLALLELGKQIH------GLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYR 298
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M +D +SW ++IVG AQ+G EAL L+ +M+L KP+ VT +G+L ACSHAGLV G
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRG 358
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
R+ F SM+ ++ + P HYTC++DLL R+G LDEA+ L++ +P +PD W SLL+AC
Sbjct: 359 RELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACM 418
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
H N+ +G +A ++L+++P + Y+LLSN+YA WG V +VRKLM V K+PG
Sbjct: 419 RHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGY 478
Query: 632 SWIEILGHVNVFMVKDK-RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
S I+ VF + HP+ EI +LK L EM++ GYVPN S
Sbjct: 479 SSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTS 525
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 242/554 (43%), Gaps = 116/554 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ S F L C R +S S +H++IIK+ F + N L+DVY KCG + A ++
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M N++ +W SI+T K A +P R N+M + HD
Sbjct: 61 FDEMPNRDHVSWASILTAHNK-----------ALIPRRTLSMLNTMFT----HDGLQP-- 103
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ F + AC+ ++G QVHA S + D + S+LIDMY
Sbjct: 104 -------------DHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMY 150
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR-------------- 242
KCG+ AR VFD + +N VSW S+I+ Y ++G +A+++F++
Sbjct: 151 TKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALIS 210
Query: 243 -----------------MMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
M GI+ D + L+SVV CA+LA + G QIH L+
Sbjct: 211 GLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG-LVIALGF 269
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ L + NALVDMYAKC + A+ +F RMP ++V+S TS++ G A
Sbjct: 270 ESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTA-------------- 315
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
Q+G+ EEAL L+ + + P TF LL AC
Sbjct: 316 -----------------QHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYAC--------- 349
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDW 457
+H +V G +D + S L+D+ + G +++ + + + + D
Sbjct: 350 --SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDE 407
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPD-HVTMIGVLCACSHAGLVEEGRKYF 515
+W +++ C ++ + + ++L L E P ++ + V G V + RK
Sbjct: 408 PTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLM 467
Query: 516 SSMS--KEHGLAPL 527
SSM KE G + +
Sbjct: 468 SSMEVRKEPGYSSI 481
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/666 (34%), Positives = 351/666 (52%), Gaps = 88/666 (13%)
Query: 77 FDKMSNKNVFTWNSIITGLLKWGF--IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
F K + WN ++T + + A R+F +P RD+ SWN++++ A E
Sbjct: 17 FPKSGSCATTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPE 76
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A MH++ A + ++ GSAL + A + +G Q+ +L KS +++V+ SAL+D
Sbjct: 77 AWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLD 136
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+Y KCGRV AR+VFDGM ERN VSWN+LI Y ++G + ALE+F+ M G+ PDE T
Sbjct: 137 VYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEAT 196
Query: 255 LASVVSACASLAAFKEGLQIHARLMR-------------------CEKLRN--------- 286
AS+++A + F Q+H ++++ C L++
Sbjct: 197 FASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIG 255
Query: 287 ---DLVLGNALVDMYAKCGKLNEARCVFDRM----------------------------- 314
DL+ NA++ Y G +EA F RM
Sbjct: 256 DIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQ 315
Query: 315 -----------------PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
P+ N + +M + Y + ++ A F ++ ++ VSWN+++
Sbjct: 316 GRVIHGLVIKSALEGVTPVCNAL--IAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSML 373
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
GY+Q+G + +AL FR + E+V Y F L + + LA LQLG+Q H GL
Sbjct: 374 TGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIH------GLV 427
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
SG S+ FV +SLI MY K G ++D + FE + V WNAMI G AQ+G
Sbjct: 428 IHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVD 487
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF +ML DH+T +G++ +CSHAGLV+EG + ++M ++G+ +HY C VDL
Sbjct: 488 ILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDL 547
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
GRAG LD+AK LI++MP +PDA++W +LL AC++H N+ L VA L EP Y
Sbjct: 548 YGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTY 607
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLS+MY+ LG W + V+++M+KRG+ K PG SWIE+ V+ F +DK HP EIY
Sbjct: 608 VLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIY 667
Query: 658 LVLKML 663
+L++L
Sbjct: 668 EMLRVL 673
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 263/540 (48%), Gaps = 83/540 (15%)
Query: 58 NRLIDVYAKCGC--LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
N+L+ Y++ L AR+VFD++ ++ +WN+++ G +A RL +
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRA----- 83
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
MH++ A + ++ GSAL + A + +G Q+ +
Sbjct: 84 --------------------------MHAQGLASNTFALGSALRSAAVARRPAIGAQLQS 117
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
L KS +++V+ SAL+D+Y KCGRV AR+VFDGM ERN VSWN+LI Y ++G +
Sbjct: 118 LALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMAS 177
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
ALE+F+ M G+ PDE T AS+++A + F Q+H ++++ VL NA +
Sbjct: 178 ALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVL-NAAI 235
Query: 296 DMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
Y++CG L ++R +FD + IR+++S WN
Sbjct: 236 TAYSQCGSLKDSRRIFDGIGDIRDLIS-------------------------------WN 264
Query: 355 ALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
A++ YT NG ++EA+ F R+++ V P Y+F +++++C+ + G H V
Sbjct: 265 AMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCS-----EHGHDDHQGRVI 319
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGS---VEDGCRIFETMVERDWVSWNAMIVGCAQN 470
HGL S E V N+LI MY + +ED + F ++V +D VSWN+M+ G +Q+
Sbjct: 320 HGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQH 379
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G +AL F+ M + D L + S +++ G++ + G A
Sbjct: 380 GLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQ-IHGLVIHSGFASNDFV 438
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR-----NIMLGEYVAKK 585
+ ++ + ++G +D+A+ E + +V W +++ H +I+ E + +K
Sbjct: 439 SSSLIFMYSKSGIIDDARKSFEEAD-KSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/689 (33%), Positives = 360/689 (52%), Gaps = 98/689 (14%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P LL C K++ R +HA++IK+ + + ++L++ C+ FD +
Sbjct: 4 PSLSLLHXC---KTLQSLRIIHAQMIKTGLHNTNYALSKLLEX-----CVLSPH--FDGL 53
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
A +F ++ E WN+M G A AL +V
Sbjct: 54 PY---------------------AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYV 92
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + Y+F L +CA S FK G Q+H + K + D+Y+ ++LI MY + G
Sbjct: 93 CMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNG 152
Query: 201 RVSCARRV-------------------------------FDGMRERNIVSWNSLITCYEQ 229
R+ A++V FD + +++VSWN+ I+ Y +
Sbjct: 153 RLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAE 212
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +ALE+F +MM + + PDE T+ +V+SACA + + G Q+H+ + +L
Sbjct: 213 TGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHS-WINDHGFGXNLK 271
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NAL+D+Y+KCG+L E C +F + ++
Sbjct: 272 IVNALIDLYSKCGEL-ETACG------------------------------LFQGLSNKD 300
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V+SWN LI GYT +EAL LF+ + R P T ++L+ACA+L + +GR H
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHV 360
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K L G + + SLIDMY KCG +E ++F++M+ R SWNAMI G A
Sbjct: 361 YIDKR----LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G A +F +M G +PD +T +G+L ACSH+G+++ GR F SM++++ L P +
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLE 476
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CM+DL G +G EA+ +I M M+PD VIW SLL ACK+H N+ LGE A+ L++I
Sbjct: 477 HYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 536
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
EP N G YVLLSN+YA RW EV + R L+ +G+ K PGCS IEI V+ F++ DK
Sbjct: 537 EPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 596
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNASD 678
HP N+EIY +L+ + ++ G+VP+ S+
Sbjct: 597 HPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 141/456 (30%), Positives = 238/456 (52%), Gaps = 38/456 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +S + + +++H +++K F +++I LI +Y + G L A+KV
Sbjct: 102 NSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVX 161
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK S+++V ++ ++ITG G I+ A ++F +P +D SWN+ +SG+A+ + EAL
Sbjct: 162 DKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALE 221
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM N E + + LSACA S ++G QVH+ ++ + ++ + +ALID+Y
Sbjct: 222 LFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYS 281
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F G+ ++++SWN+LI Y +AL +F M+ SG +P++VT+ S
Sbjct: 282 KCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLS 341
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++SACA L A G IH + R + + N L +L+DMYAKCG + A+ VFD M
Sbjct: 342 ILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLN 401
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++ S +M+ G+A +G A +F +
Sbjct: 402 RSLSSWNAMIFGFA-------------------------------MHGRANAAFDIFSRM 430
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++ + P TF LL+AC++ L LGR H+ + R G +ID+
Sbjct: 431 RKNGIEPDDITFVGLLSACSHSGMLDLGR----HIFRSMTRDYKLMPKLEHYG-CMIDLX 485
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G ++ ++ TM +E D V W +++ C +G
Sbjct: 486 GHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHG 521
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 300/492 (60%), Gaps = 43/492 (8%)
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+++ + LI+MY K ++ A ++FD M +RN++SW ++I+ Y + ALE+ V M+
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ P+ T +SV+ +C ++ + +H +++ E L +D+ + +AL+D++AK G+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIK-EGLESDVFVRSALIDVFAKLGEPE 211
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A VFD MV+G + + WN++I G+ QN
Sbjct: 212 DALSVFD-----------EMVTG--------------------DAIVWNSIIGGFAQNSR 240
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
++ AL LF+ +KR T ++L AC LA L+LG QAH H+VK+ + D
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--------DQD 292
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ + N+L+DMY KCGS+ED R+F M ERD ++W+ MI G AQNGY EAL LF++M
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KP+++T++GVL ACSHAGL+E+G YF SM K +G+ P+++HY CM+DLLG+AG LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A L+ M +PDAV W +LL AC+V RN++L EY AKK++ ++P ++G Y LLSN+YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+W V +R MR RG+ K+PGCSWIE+ ++ F++ D HP E+ L L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 666 EMKRVGYVPNAS 677
+ +GYVP +
Sbjct: 533 RLTGIGYVPETN 544
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 43/384 (11%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+F N +I +K+ ++DA +LF MP+R+ SW +M+S +++ +AL V M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+N + Y++ S L +C G D +M +H + K SDV++ SALID++ K G
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A VFD M + + WNS+I + QN + ALE+F RM +G ++ TL SV+ AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA + G+Q H +++ ++ DL+L NALVDMY KCG L +A VF++M R+V++ ++
Sbjct: 273 LALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SG A QNG ++EAL LF +K P
Sbjct: 330 MISGLA-------------------------------QNGYSQEALKLFERMKSSGTKPN 358
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ T +L AC++ L+ G + K L G + +ID+ K G ++D
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKK-----LYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 445 GCRIFETM-VERDWVSWNAMIVGC 467
++ M E D V+W ++ C
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGAC 437
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 40/298 (13%)
Query: 21 PFAKLLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
P S LRS +SD R +H IIK S++F+++ LIDV+AK G
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG----------- 208
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+DA +F M D WNS++ GFAQ+ R AL F
Sbjct: 209 --------------------EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M F + + S L AC G ++G Q H + K Y D+ + +AL+DMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 306
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + A RVF+ M+ER++++W+++I+ QNG + +AL++F RM +SG +P+ +T+ V+
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 260 SACASLAAFKEG---LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AC+ ++G + +L + +R ++D+ K GKL++A + + M
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEM 421
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/655 (35%), Positives = 348/655 (53%), Gaps = 88/655 (13%)
Query: 88 WNSIITGLLKWGF--IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
WN ++T + + A R+F +P RD+ SWN++++ A EA MH++
Sbjct: 28 WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
A + ++ GSAL + A + +G Q+ +L KS +++V+ SAL+D+Y KCGRV A
Sbjct: 88 GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VFDGM ERN VSWN+LI Y ++G + ALE+F+ M G+ PDE T AS+++A
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207
Query: 266 AAFKEGLQIHARLMR-------------------CEKLRN------------DLVLGNAL 294
+ F Q+H ++++ C L++ DL+ NA+
Sbjct: 208 SCFLMH-QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266
Query: 295 VDMYAKCGKLNEARCVFDRM---------------------------------------- 314
+ Y G +EA F RM
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKS 326
Query: 315 ------PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
P+ N + +M + Y + ++ A F ++ ++ VSWN+++ GY+Q+G + +
Sbjct: 327 ALEGVTPVCNAL--IAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSAD 384
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
AL FR + E+V Y F L + + LA LQLG+Q H GL SG S+ FV
Sbjct: 385 ALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIH------GLVIHSGFASNDFV 438
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
+SLI MY K G ++D + FE + V WNAMI G AQ+G LF +ML
Sbjct: 439 SSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKA 498
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
DH+T +G++ +CSHAGLV+EG + ++M ++G+ +HY C VDL GRAG LD+AK
Sbjct: 499 PLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAK 558
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELG 608
LI++MP +PDA++W +LL AC++H N+ L VA L EP YVLLS+MY+ LG
Sbjct: 559 KLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLG 618
Query: 609 RWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
W + V+++M+KRG+ K PG SWIE+ V+ F +DK HP EIY +L++L
Sbjct: 619 MWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 272/558 (48%), Gaps = 84/558 (15%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGC--LYGARKVFDKMSNKNVFTWNSIITGLLK 97
R HA ++KS A+ N+L+ Y++ L AR+VFD++ ++ +WN+++
Sbjct: 12 RSHASLLKSGVAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAA 70
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
G +A RL + MH++ A + ++ GSA
Sbjct: 71 SGAHPEAWRLLRA-------------------------------MHAQGLASNTFALGSA 99
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L + A + +G Q+ +L KS +++V+ SAL+D+Y KCGRV AR+VFDGM ERN
Sbjct: 100 LRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNT 159
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWN+LI Y ++G + ALE+F+ M G+ PDE T AS+++A + F Q+H +
Sbjct: 160 VSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH-QLHGK 218
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVK 336
+++ VL NA + Y++CG L ++R +FD + IR+++S
Sbjct: 219 IVKYGSALGLTVL-NAAITAYSQCGSLKDSRRIFDGIGDIRDLIS--------------- 262
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNAC 395
WNA++ YT NG ++EA+ F R+++ V P Y+F +++++C
Sbjct: 263 ----------------WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSC 306
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS---VEDGCRIFETM 452
+ + G H V HGL S E V N+LI MY + +ED + F ++
Sbjct: 307 S-----EHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSL 361
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
V +D VSWN+M+ G +Q+G +AL F+ M + D L + S +++ G+
Sbjct: 362 VLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGK 421
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ + G A + ++ + ++G +D+A+ E + +V W +++
Sbjct: 422 Q-IHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD-KSSSVPWNAMIFGYAQ 479
Query: 573 HR-----NIMLGEYVAKK 585
H +I+ E + +K
Sbjct: 480 HGQAENVDILFNEMLQRK 497
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 300/492 (60%), Gaps = 43/492 (8%)
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+++ + LI+MY K ++ A ++FD M +RN++SW ++I+ Y + ALE+ V M+
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ P+ T +SV+ +C ++ + +H +++ E L +D+ + +AL+D++AK G+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIK-EGLESDVFVRSALIDVFAKLGEPE 211
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A VFD MV+G + + WN++I G+ QN
Sbjct: 212 DALSVFD-----------EMVTG--------------------DAIVWNSIIGGFAQNSR 240
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
++ AL LF+ +KR T ++L AC LA L+LG QAH H+VK+ + D
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--------DQD 292
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ + N+L+DMY KCGS+ED R+F M ERD ++W+ MI G AQNGY EAL LF++M
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KP+++T++GVL ACSHAGL+E+G YF SM K +G+ P+++HY CM+DLLG+AG LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A L+ M +PDAV W +LL AC+V RN++L EY AKK++ ++P ++G Y LLSN+YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+W V +R MR RG+ K+PGCSWIE+ ++ F++ D HP E+ L L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 666 EMKRVGYVPNAS 677
+ +GYVP +
Sbjct: 533 RLTGIGYVPETN 544
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 43/384 (11%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+F N +I +K+ ++DA +LF MP+R+ SW +M+S +++ +AL V M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+N + Y++ S L +C G D +M +H + K SDV++ SALID++ K G
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A VFD M + + WNS+I + QN + ALE+F RM +G ++ TL SV+ AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA + G+Q H +++ ++ DL+L NALVDMY KCG L +A VF++M R+V++ ++
Sbjct: 273 LALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SG A QNG ++EAL LF +K P
Sbjct: 330 MISGLA-------------------------------QNGYSQEALKLFERMKSSGTKPN 358
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ T +L AC++ L+ G + K L G + +ID+ K G ++D
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKK-----LYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 445 GCRIFETM-VERDWVSWNAMIVGC 467
++ M E D V+W ++ C
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGAC 437
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 42/296 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L SC +SD R +H IIK S++F+++ LIDV+AK G
Sbjct: 165 YSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG------------- 208
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+DA +F M D WNS++ GFAQ+ R AL F +
Sbjct: 209 ------------------EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + + S L AC G ++G Q H + K Y D+ + +AL+DMY KCG
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 308
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A RVF+ M+ER++++W+++I+ QNG + +AL++F RM +SG +P+ +T+ V+ A
Sbjct: 309 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 262 CASLAAFKEG---LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
C+ ++G + +L + +R ++D+ K GKL++A + + M
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEM 421
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 339/605 (56%), Gaps = 26/605 (4%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ V N IT ++ G + DA RLFA+M R ++N+M+ G+A + R + AL +F
Sbjct: 32 DAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRS 91
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ + +S+ + L A S AL + V + +I + G
Sbjct: 92 IPRPD----SFSYNTLLHALGVSSSL---ADARALFDEMPVKDSVSY-NVMISSHANHGL 143
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
VS AR FD E++ VSWN ++ Y +NG +A ++F S E D ++ ++++
Sbjct: 144 VSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLF----DSRTEWDAISWNALMAG 199
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ +E ++ R+ + D+V N +V +A+ G + EAR +FD PIR+V +
Sbjct: 200 YVQCSQIEEAQKMFNRM-----PQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDVFT 254
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T++VSGYA+ ++ A+ +F M E+N VSWNA++A Y Q EEA LF + +V
Sbjct: 255 WTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNV 314
Query: 382 CP-----THYTFGNLLNACANLADLQLGRQA---HTHVVKHGLRFLSGEESDIFVGNSLI 433
T Y +L+ + D+ + A + + S E +F
Sbjct: 315 ASWNTMLTGYAQAGMLDEARAIFDMMPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRC 374
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY KCG++E+ FE M ERD VSWN MI G A++G+G EAL +F M KPD +
Sbjct: 375 AMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDI 434
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++GVL ACSH+GLVE+G YF SM ++ G+ +HYTCM+DLLGRAG LDEA L++
Sbjct: 435 TLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKD 494
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP +PD+ +WG+LL A ++HRN LG A+K+ E+EP N+G YVLLSN+YA G+W +V
Sbjct: 495 MPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDV 554
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
++R +M +RGV K PG SWIE+ V+ F V D HP ++IY L+ L MK+ GYV
Sbjct: 555 DKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYGFLEDLDIRMKKAGYV 614
Query: 674 PNASD 678
+A+D
Sbjct: 615 -SATD 618
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 209/476 (43%), Gaps = 92/476 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + LL + S S++D R + + S N +I +A G + AR F
Sbjct: 96 DSFSYNTLLHALGVSSSLADARALFDEMPVKDSVS----YNVMISSHANHGLVSLARHYF 151
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D K+ +WN ++ ++ G I +A LF S E D SWN++++G+ Q + EA
Sbjct: 152 DLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQIEEAQK 211
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + S+ + +S A D ++ + DV+ +A++ Y
Sbjct: 212 MFNRMPQRDVV----SWNTMVSGHARRGDMAEARRLFDVAP----IRDVFTWTAVVSGYA 263
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + A+RVFD M E+N VSWN+++ Y Q +A E+F M
Sbjct: 264 QNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAM-------------- 309
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
C ++A++ N ++ YA+ G L+EAR +FD MP +
Sbjct: 310 ---PCRNVASW-----------------------NTMLTGYAQAGMLDEARAIFDMMPQK 343
Query: 318 NVVSETSMVSGYA----------------------KASSVKSARLMFTKMLERNVVSWNA 355
+ VS +M++ Y+ K +++ A F +M ER++VSWN
Sbjct: 344 DAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKCGNMEEAHSAFEEMEERDIVSWNT 403
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+IAGY ++G +EAL +F +++ S P T +L AC +H+ +V+ G
Sbjct: 404 MIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAAC-----------SHSGLVEKG 452
Query: 416 LRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
+ + D V +ID+ + G +++ + + M E D W A++
Sbjct: 453 ISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL 508
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 154/348 (44%), Gaps = 49/348 (14%)
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P V+ ++ + +A V A +F M R+ ++NA++ GY NG AL FR
Sbjct: 31 PDAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFR 90
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV---------------VKHGLRFL 419
+ R P +++ LL+A + L R + HGL L
Sbjct: 91 SIPR----PDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSYNVMISSHANHGLVSL 146
Query: 420 S------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
+ E D N ++ Y++ G +++ +F++ E D +SWNA++ G Q
Sbjct: 147 ARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQCSQI 206
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EA +F +M + D V+ ++ + G + E R+ F +AP++D +T
Sbjct: 207 EEAQKMFNRM----PQRDVVSWNTMVSGHARRGDMAEARRLFD-------VAPIRDVFTW 255
Query: 534 MVDLLGRA--GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
+ G A G L+EAK + +AMP + +AV W +++AA V R +M AK+L + P
Sbjct: 256 TAVVSGYAQNGMLEEAKRVFDAMP-EKNAVSWNAMMAAY-VQRRMM---EEAKELFDAMP 310
Query: 592 -SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
N + + YA+ G E + +M ++ V SW +L
Sbjct: 311 CRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDAV-----SWAAMLA 353
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 358/662 (54%), Gaps = 74/662 (11%)
Query: 19 SSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQNRLIDVYAKCGCLYGAR 74
SSP KLL +K++ + +H+ +I + A+E I N LI+ YAK + A
Sbjct: 27 SSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAH 86
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD+ MPER+ SW+++++G+ + +
Sbjct: 87 NLFDR-------------------------------MPERNVVSWSALMTGYLLNGFSLK 115
Query: 135 ALGYFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ M SE N + +EY A+S+C + G Q H LL K+ +S Y+ +AL+
Sbjct: 116 VIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALV 175
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KC V A V++ + +IV++NS+++ +NG + LEV M++ ++ D+V
Sbjct: 176 SMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKV 235
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T + S CASL + GL +H +++ + + D + +A+++MY KCGK AR VFD
Sbjct: 236 TFVNAFSLCASLKDLRLGLHVHGKMLTSD-VECDAYVSSAIINMYGKCGKSLMARGVFDG 294
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ RNVV W A++A QNG EEAL LF
Sbjct: 295 LQ-------------------------------SRNVVLWTAVMASCFQNGCFEEALNLF 323
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+++E+V +T+ LLNACA L+ + G H H K SG + + VGN+LI
Sbjct: 324 SKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEK------SGFKHHVMVGNALI 377
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
+MY K G +E ++F M+ RD ++WNAMI G + +G G +AL +F+ ML E P++V
Sbjct: 378 NMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYV 437
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T GVL AC H GLV+EG Y + K+ G+ P +HYTC+V LL + G L+EA+ +
Sbjct: 438 TFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRT 497
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
P++ D V W +LL AC VH+N LG +VA+ +LE++P++ G Y LLSN+YA+ RW V
Sbjct: 498 APVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGV 557
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
V+VRKLMR + + K+PG SWIEI ++F +D +HP + Y +K L +K +GY
Sbjct: 558 VKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYT 617
Query: 674 PN 675
P+
Sbjct: 618 PD 619
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 351/623 (56%), Gaps = 63/623 (10%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ A ++F +P+ D SW ++SGFA+ ++ LG F KM + ++++ L +
Sbjct: 337 LEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKS 396
Query: 161 CAGSV-DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
C+ +V D ++G +H + ++ D + ++++D Y KC A ++F M E++ VS
Sbjct: 397 CSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVS 456
Query: 220 WNSLITCYEQNG------------PASDA-------------------LEVFVRMMASGI 248
WN +++ Y Q G P DA LE+ +M+A+G
Sbjct: 457 WNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGP 516
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+++T + + +SL+ G QIH ++++ L +D + N+L+DMY KCG++ +A
Sbjct: 517 AFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVL-DDGFVRNSLIDMYCKCGEMEKAS 575
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +P E+SM++ S A + VSW+++++GY QNG E+
Sbjct: 576 VIFKHLP-----QESSMMN---SEESCDDAVV--------ESVSWSSMVSGYVQNGRFED 619
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK--HGLRFLSGEESDI 426
AL F + V +T ++++ACA+ L+LGRQ H ++ K HGL D+
Sbjct: 620 ALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGL--------DV 671
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
F+G+S+IDMY+KCGS+ D IF +R+ V W +MI GCA +G G EA+ LF+ M+
Sbjct: 672 FLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINE 731
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G P+ V+ +GVL ACSHAGL+EEG KYF M + +G+ P +H+TCMVDL GRAG L+E
Sbjct: 732 GITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE 791
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
K I + + +W S L++C+VH+NI +G +V KKLLE+EP ++GPY+L S++ A
Sbjct: 792 IKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICAT 851
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
RW E ++R LM++RGV K P SWI++ V+ F++ D+ HP + +IY L L
Sbjct: 852 EHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGR 911
Query: 667 MKRVGY----VPNASDDEAYEEQ 685
+K +GY P D E + Q
Sbjct: 912 LKEIGYSTDVTPVMQDVEQEQRQ 934
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 199/398 (50%), Gaps = 52/398 (13%)
Query: 25 LLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+L SC S +V+D+R +H I+++ + + N ++D Y KC C A K+F M+
Sbjct: 393 VLKSC--SSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMA 450
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+ +WN +++ L+ G + + LF +P +D SWN+M+ G ++ AL K
Sbjct: 451 EKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYK 510
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + A ++ +F AL + +G Q+H + K D ++ ++LIDMY KCG
Sbjct: 511 MVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGE 570
Query: 202 VSCARRVFDGMRERN---------------IVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ A +F + + + VSW+S+++ Y QNG DAL+ F M+ S
Sbjct: 571 MEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICS 630
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
+E D+ TL SVVSACAS + G Q+H + + D+ LG++++DMY KCG LN+
Sbjct: 631 QVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGH-GLDVFLGSSIIDMYVKCGSLND 689
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A +F++ RNVV TSM+SG A +G+
Sbjct: 690 AWLIFNQAKDRNVVLWTSMISGCA-------------------------------LHGQG 718
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
EA+ LF L+ E + P +F +L AC++ L+ G
Sbjct: 719 REAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEG 756
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 224/447 (50%), Gaps = 32/447 (7%)
Query: 147 FALSEYSFGSAL---SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
F+LS Y + S + S+++ +HA L K+ G+ L+++Y K +
Sbjct: 281 FSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLE 338
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++F+ + + ++ SW LI+ + + G ++D L +F +M G+ P++ TL+ V+ +C+
Sbjct: 339 QAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
Query: 264 S-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
S + + G IH ++R L D VL N+++D Y KC A +F M ++ VS
Sbjct: 399 SNVNDSRIGKGIHGWILR-NGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSW 457
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
M+S Y + ++ + +F ++ ++ SWN +I G +NG AL L +
Sbjct: 458 NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 517
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
TF L ++L+ L LG+Q HT V+K G+ D FV NSLIDMY KCG +
Sbjct: 518 FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVL------DDGFVRNSLIDMYCKCGEM 571
Query: 443 EDGCRIFETMVER---------------DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
E IF+ + + + VSW++M+ G QNG +AL F M+
Sbjct: 572 EKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQ 631
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK-EHGLAPLKDHYTCMVDLLGRAGCLDE 546
+ D T+ V+ AC+ AG++E GR+ + K HGL + ++D+ + G L++
Sbjct: 632 VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG--SSIIDMYVKCGSLND 689
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
A LI + V+W S+++ C +H
Sbjct: 690 A-WLIFNQAKDRNVVLWTSMISGCALH 715
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 44/194 (22%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D ++ +C + + R+VH I K ++F+ + +ID+Y KCG L A +
Sbjct: 634 VDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLI 693
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ ++NV W S M+SG A H + EA+
Sbjct: 694 FNQAKDRNVVLWTS-------------------------------MISGCALHGQGREAV 722
Query: 137 GYFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMG 189
F M +E +E SF L+AC+ G F++ +V+ + + +
Sbjct: 723 RLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF------ 776
Query: 190 SALIDMYGKCGRVS 203
+ ++D+YG+ GR++
Sbjct: 777 TCMVDLYGRAGRLN 790
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/533 (39%), Positives = 313/533 (58%), Gaps = 7/533 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F + WN M+ G ++ DR ++A+ ++ M+ + S +F +CA
Sbjct: 25 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 84
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D + G V K + S ++ +ALI MY G ++ A++VFDGM ER++VSWNS+
Sbjct: 85 VSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSI 144
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y Q L++F M A + D VT+ +SA L+ ++ G + + +
Sbjct: 145 ICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYL-VKYIDEHG 203
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ DL LGN L+DMY + G ++ A VF +M +N+VS +M+ GYAK ++ +A+ +F
Sbjct: 204 VVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFN 263
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+M R+V+SW ++I GY+ ++ EA+ LF+ + V P T L+ACA+L L
Sbjct: 264 EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDA 323
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G H ++ KH ++ SD+FVGNSLIDMY KCG VE ++F M RD VSW ++
Sbjct: 324 GEAVHDYIRKHDIK------SDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSI 377
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I G A NG+ AL +F +ML G P H T +GVL AC+H GLV++G ++F SM +
Sbjct: 378 ISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYR 437
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
LAP HY C+VDLL R+G LD A I+ MP+ PD VIW LL+ACK+H N++L E V+
Sbjct: 438 LAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVS 497
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
KKLL ++PSN+G YVL S+ YA RW +V+++RKLM + K S IE+
Sbjct: 498 KKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSIEV 550
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 227/496 (45%), Gaps = 100/496 (20%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L SC R V + V +K F S F+ N LI +Y G L A+KVFD
Sbjct: 75 FIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFD--- 131
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
M ERD SWNS++ G+ Q +RF + L F +
Sbjct: 132 ----------------------------GMLERDVVSWNSIICGYYQFNRFKKVLDLFRE 163
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + N + A+SA +++MG + + + D+Y+G+ LIDMYG+ G
Sbjct: 164 MQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGM 223
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD-------------- 235
+ A RVF M+E+NIVSWN++I Y + G P+ D
Sbjct: 224 IDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLA 283
Query: 236 -----ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
A+++F MM S ++PDE+T+A+ +SACA L + G +H + R +++D+ +
Sbjct: 284 KQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI-RKHDIKSDVFV 342
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GN+L+DMY KCG + +A VF+ M R+ VS TS++SG A
Sbjct: 343 GNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLA-------------------- 382
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
NG E AL +F + +E +CPTH TF +L ACA++ + G + H
Sbjct: 383 -----------VNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVE-HFK 430
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQ 469
+++ R L+ E ++D+ + G ++ + M + D V W ++ C
Sbjct: 431 SMENTYR-LAPEMKHY---GCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 486
Query: 470 NGYGTEALGLFKKMLL 485
+G A + KK+L+
Sbjct: 487 HGNLVLAEIVSKKLLV 502
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 17/275 (6%)
Query: 321 SETSMVSGYA-KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S + ++ YA S+ A +F ++ ++ WN +I G +++ +A+ + + +
Sbjct: 7 SISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYK 66
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ +H TF L +CA ++D++ G+ H +K G ES FV N+LI MY+
Sbjct: 67 GIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGF------ESXSFVSNALIHMYVCF 120
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + ++F+ M+ERD VSWN++I G Q + L LF++M + D VTM+ +
Sbjct: 121 GELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAI 180
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQ 557
A E G Y EHG+ + D Y ++D+ GR G +D A + M +
Sbjct: 181 SATCFLSEWEMG-DYLVKYIDEHGV--VVDLYLGNTLIDMYGRRGMIDFAGRVFYQMK-E 236
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
+ V W +++ N++ AKKL PS
Sbjct: 237 KNIVSWNAMIMGYAKVGNLV----AAKKLFNEMPS 267
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L +C S+ VH I K S++F+ N LID+Y KCG + A +VF
Sbjct: 304 DEITVATALSACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVF 363
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ M ++ +W SII+GL GF + A +F M + C + G
Sbjct: 364 NDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVG 411
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 331/574 (57%), Gaps = 47/574 (8%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A LF + E SWN ++ + ++ R ++A+ F K+ + F ++ L CA
Sbjct: 68 AHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCAR 126
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+ G Q+H L+ K + D ++ S+L+ MY KCG + R+VFD M ++++VSWNSL
Sbjct: 127 LGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSL 186
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y + G ALE+F M P++ + + +
Sbjct: 187 IDGYARCGEIELALEMFEEM------PEKDSFSWTI------------------------ 216
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L+D +K GKL AR VFDRMPIRN VS +M++GY KA +A+ +F
Sbjct: 217 ----------LIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFD 266
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+M ER++V+WN++I GY +N + +AL LF ++ RE + P + T ++A + + L
Sbjct: 267 QMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGT 326
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
GR H+++VK G + +D +G LI+MY KCGSV+ R+F ++ ++ W ++
Sbjct: 327 GRWVHSYIVKSGFK------TDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSV 380
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
IVG +G + L LF +M G KP +T IGVL ACSHAG E+ +YF M+ ++G
Sbjct: 381 IVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYG 440
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P +HY C++D+L RAG L+EAK IE MP++ + VIW SLL+ + H NI +GEY A
Sbjct: 441 IKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAA 500
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
+ L+++ P +G YV+LSNMYA G W +V +VR++M+K+G+ K PGCS IE G ++ F
Sbjct: 501 QHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEF 560
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+V DK HP +EIY+ L + +++ G++P+ +
Sbjct: 561 IVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTT 594
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 212/455 (46%), Gaps = 77/455 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS +L C R ++ + +++H ++K F + F+ + L+ +Y+KCG + RKVF
Sbjct: 113 DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVF 172
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M +K+V +WNS+I G + G I+ A +F MPE+D SW ++ G ++ + A
Sbjct: 173 DRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARD 232
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N SV + +A+I+ Y
Sbjct: 233 VFDRMPIRN-----------------SVSW----------------------NAMINGYM 253
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A+ +FD M ER++V+WNS+IT YE+N + AL++F M+ I P+ T+
Sbjct: 254 KAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILG 313
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VSA + + + G +H+ +++ + D VLG L++MY+KCG + A VF +P
Sbjct: 314 AVSAASGMVSLGTGRWVHSYIVK-SGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIP-- 370
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ + W ++I G +G E+ L LF +
Sbjct: 371 -----------------------------KKKLGHWTSVIVGLGMHGLVEQTLELFDEMC 401
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R + P TF +LNAC++ AH + + + G + I LID+
Sbjct: 402 RTGLKPHAITFIGVLNACSHAG---FAEDAHRYFKM--MTYDYGIKPSIEHYGCLIDVLC 456
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G +E+ E M ++ + V W +++ G ++G
Sbjct: 457 RAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 158/279 (56%), Gaps = 3/279 (1%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
LID +K G L AR VFD+M +N +WN++I G +K G + A LF MPER +W
Sbjct: 217 LIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTW 276
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
NSM++G+ ++ +F++AL F M E+ + + + A+SA +G V G VH+ + K
Sbjct: 277 NSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVK 336
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
S + +D +G+ LI+MY KCG V A RVF + ++ + W S+I +G LE+
Sbjct: 337 SGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLEL 396
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMY 298
F M +G++P +T V++AC S A F E + ++M + ++ + L+D+
Sbjct: 397 FDEMCRTGLKPHAITFIGVLNAC-SHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVL 455
Query: 299 AKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVK 336
+ G L EA+ +RMPI+ N V TS++SG K +++
Sbjct: 456 CRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIR 494
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 414 HGLRFLSGEESDIFVGNSLIDMYM--KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
H L + + V + L+ +Y + +++ +F+ + E VSWN +I +N
Sbjct: 35 HALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQ 94
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+A+ LF K LLC PD T+ VL C+ G ++EG++ + K G K
Sbjct: 95 RSNDAIALFCK-LLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKI-GFGVDKFVL 152
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ +V + + G ++ + + + M D V W SL+
Sbjct: 153 SSLVSMYSKCGEIELCRKVFDRME-DKDVVSWNSLI 187
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/537 (38%), Positives = 312/537 (58%), Gaps = 38/537 (7%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S+Y F + LS+ A +V +G Q+H + K+ V + +AL+ MY KC ++ A ++F
Sbjct: 209 SDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMF 268
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D +RN ++W++++T Y QNG + +A+++F RM ++GI+P E T+ V++AC+ +
Sbjct: 269 DSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLV 328
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
EG Q+H+ L++ LG F+R ++ + T++V Y
Sbjct: 329 EGKQLHSFLLK---------LG-------------------FER----HLFATTALVDMY 356
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
AKA + AR F + ER+V W +LI+GY QN +NEEAL L+R +K + P T
Sbjct: 357 AKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMA 416
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++L AC++LA L+LG+Q H H +KHG ++ +G++L MY KCGS+EDG +F
Sbjct: 417 SVLKACSSLATLELGKQVHGHTIKHGFGL------EVPIGSALSTMYTKCGSLEDGNLVF 470
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+D VSWNAMI G + NG G EAL LF++ML G +PD VT + ++ ACSH G VE
Sbjct: 471 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVE 530
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G YF MS + GL P DHY CMVD+L RAG L E K IE+ + +W LL+A
Sbjct: 531 RGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSA 590
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
CK H N LG Y +KL+ + S YV L+ +Y LGR +V RV KLMR GV K+
Sbjct: 591 CKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEV 650
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQN 686
GCSWI + +VF+V D HP +E ++ +++R+M G+V + EE++
Sbjct: 651 GCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQMLEEGFVTVLNSSYVEEEEH 707
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 254/545 (46%), Gaps = 79/545 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L S + V R++H +K+ + + N L+ +Y+KC L
Sbjct: 213 FTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESL----------- 261
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++A ++F S +R+ +W++MV+G++Q+ EA+ F +
Sbjct: 262 --------------------NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSR 301
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S SEY+ L+AC+ G Q+H+ L K + ++ +AL+DMY K G
Sbjct: 302 MFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 361
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR+ FD ++ER++ W SLI+ Y QN +AL ++ RM +GI P++ T+ASV+ A
Sbjct: 362 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 421
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+SLA + G Q+H ++ ++ +G+AL MY KCG L + VF R P ++VVS
Sbjct: 422 CSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVS 480
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+M+S G + NG+ +EAL LF + E
Sbjct: 481 WNAMIS-------------------------------GLSHNGQGDEALELFEEMLAEGT 509
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF N+++AC++ ++ G ++ H++ G + + ++D+ + G
Sbjct: 510 EPDDVTFVNIISACSHKGFVERG-WSYFHMMSDQF----GLDPKVDHYACMVDVLSRAGQ 564
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF--KKMLLCG--EKPDHVTMI 496
+++ E+ ++ W ++ C +G LG++ +K++ G E +V +
Sbjct: 565 LKETKEFIESASIDHGLCLWRILLSAC--KNHGNCELGVYAGEKLMSLGSRESSTYVQLA 622
Query: 497 GVLCACSHAGLVEEGRKYFSS--MSKEHGLA--PLKDHYTCMVDLLGRAGCLDEAKTLIE 552
G+ A VE K + +SKE G + LK+ + V ++E K L+
Sbjct: 623 GIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVS 682
Query: 553 AMPMQ 557
+ Q
Sbjct: 683 LVSRQ 687
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 204/462 (44%), Gaps = 71/462 (15%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G VHA + ++ S+ + L++ Y KCG+++ A +F+ + +++VSWNSLIT Y Q
Sbjct: 35 GRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQ 94
Query: 230 NGPASDA---LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
NG S + +++F M A I P+ TLA + A +SL + G Q HA +++
Sbjct: 95 NGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSF-G 153
Query: 287 DLVLGNALVDMYAKCG----------------------KLNEARCVFDRMPIRNVVSE-- 322
D+ + +LV MY K G +L + C + +
Sbjct: 154 DIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSDYVF 213
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSW----NALIAGYTQNGENEEALGLF----- 373
T+++S A V R + ++ ++ + NAL+ Y++ EA +F
Sbjct: 214 TAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGD 273
Query: 374 -----------------------RLLKR---ESVCPTHYTFGNLLNACANLADLQLGRQA 407
+L R + P+ YT +LNAC+++ L G+Q
Sbjct: 274 RNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQL 333
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H+ ++K G E +F +L+DMY K G + D + F+ + ERD W ++I G
Sbjct: 334 HSFLLKLGF------ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 387
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
QN EAL L+++M G P+ TM VL ACS +E G++ K HG
Sbjct: 388 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFGLE 446
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + + G L++ + P D V W ++++
Sbjct: 447 VPIGSALSTMYTKCGSLEDGNLVFRRTP-NKDVVSWNAMISG 487
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+L GR H +++ G + N L++ Y KCG + IF ++ +D VS
Sbjct: 31 NLVAGRAVHAQIIRTGTSTCTQH------ANVLVNFYAKCGQLAKAHSIFNAIICKDVVS 84
Query: 460 WNAMIVGCAQNG---YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
WN++I G +QNG + LF++M P+ T+ G+ A S GR+ +
Sbjct: 85 WNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHA 144
Query: 517 SMSKEHGLAPLKDHY--TCMVDLLGRAG 542
+ K ++ D Y T +V + +AG
Sbjct: 145 LVVK---MSSFGDIYVDTSLVGMYCKAG 169
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 353/667 (52%), Gaps = 81/667 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL + RS S+ ++H I K F S+ + N LID+Y KCG L
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGEL----------- 55
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
D A +F M +R+ SW +++ GF +H + L +
Sbjct: 56 --------------------DLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGE 95
Query: 142 MHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + + A +EY+ ++L AC D G +H L ++ Y + S+L+ +Y K G
Sbjct: 96 MRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGG 155
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVF--VRMMASGIEPDEVTLAS 257
R+ ARRVFDG I +WN++++ Y G DAL VF +R +PDE T AS
Sbjct: 156 RIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFAS 215
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC+ L A +EG Q+HA + ++ +L ALVDMY KC +L A VF+R
Sbjct: 216 LLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFER--- 272
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRL 375
LER NV+ W A++ G+ Q G+ EAL LFR
Sbjct: 273 -----------------------------LERKNVIQWTAVVVGHAQEGQVTEALELFRR 303
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
R P + +++ A+ A ++ GRQ H + G++ +G +D+ GNS++DM
Sbjct: 304 FWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCY----GIKDPTG--TDVSAGNSIVDM 357
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y+KCG ++ R+F M + VSW M+ G ++G G EA+ LF++M G +PD VT
Sbjct: 358 YLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTY 417
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSHAGLV+E R+YFS + ++ + P +HY CMVDLLGRAG L EA+ LI MP
Sbjct: 418 LALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMP 477
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
M+P +W +LL+AC+VH+++ +G LL ++ N YV LSN+ AE G W E +
Sbjct: 478 MEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHK 537
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFM---VKDKRHPLNKEIYLVLK-MLTREMKRVG 671
VR MR+RG+ KQ GCSW+E+ V+ F +++ HP +I VL+ M TR +++G
Sbjct: 538 VRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLG 597
Query: 672 YVPNASD 678
Y NA D
Sbjct: 598 Y--NADD 602
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 33/306 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF--ASEIFIQNRLIDVYAKCGCLYGARK 75
D FA LL +C + + +VHA + S F AS + L+D+Y KC L A +
Sbjct: 209 DEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQ 268
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF+++ KNV W +++ G + G + +A LF W S A+ D S
Sbjct: 269 VFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRF-------WRS----GARPD--SHV 315
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L V + + +FAL E G QVH K +DV G++++DM
Sbjct: 316 LSSVVGVLA-DFALVE-----------------QGRQVHCYGIKDPTGTDVSAGNSIVDM 357
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG A R+F MR N+VSW +++ ++G +A+ +F M A G+EPDEVT
Sbjct: 358 YLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTY 417
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++SAC+ E + + + R +R +VD+ + G+L EAR + MP
Sbjct: 418 LALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMP 477
Query: 316 IRNVVS 321
+ V
Sbjct: 478 MEPTVG 483
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 342/606 (56%), Gaps = 47/606 (7%)
Query: 86 FTWNSIIT--GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
FT + I+ L + G + A +F+ +P + NS++ G + EAL ++ +M
Sbjct: 21 FTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMM 80
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ Y+F S +C S + G Q+H +K ++SD Y + L++MY CG +
Sbjct: 81 VQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLV 137
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSAC 262
AR+VFD M ++ +VSW ++I + Q ++A+ +F RMM S ++P+EVTL +V++AC
Sbjct: 138 SARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTAC 197
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A +IH + ++ G R+VV
Sbjct: 198 ARARDLAMVKRIHEYI-------DEHGFG-------------------------RHVVLN 225
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
T ++ Y K V+ AR +F K E+N+ SWN +I G+ ++ EEAL LFR ++ + +
Sbjct: 226 TVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIK 285
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T +LL AC +L L+LG+ H ++ K + + D+ +G +L+DMY KCGS+
Sbjct: 286 GDKVTMASLLLACTHLGALELGKWLHAYIKKQRI------DVDVALGTALVDMYAKCGSI 339
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
E ++F M E+D ++W A+I+G A G AL F +M + G KPD +T +GVL AC
Sbjct: 340 ETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAAC 399
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SHAG V+EG +F+SMS +G+ P +HY +VD+LGRAG + EA+ LI++MPM PD +
Sbjct: 400 SHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFV 459
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
G LL AC++H N+ E AK+LLEI+P +SG YVLLSN+Y +W E R R+LM +
Sbjct: 460 LGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAE 519
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD---D 679
RG+ K PGCS IE+ G V+ F+ D H + EI +L+ + ++K GYVP+ S+ D
Sbjct: 520 RGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFD 579
Query: 680 EAYEEQ 685
A EE+
Sbjct: 580 MAEEEK 585
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 226/476 (47%), Gaps = 80/476 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L SC S S+ +++H K FAS+ + QN L+++Y+ CGCL ARKVF
Sbjct: 87 DRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVF 143
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM +K V SW +M+ AQ D+ +EA+
Sbjct: 144 DKMEDKTVV-------------------------------SWATMIGVHAQWDQPNEAVR 172
Query: 138 YFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M SEN +E + + L+ACA + D M ++H + + + V + + L+D+Y
Sbjct: 173 LFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVY 232
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG V AR +FD +E+N+ SWN +I + ++ +AL +F M GI+ D+VT+A
Sbjct: 233 CKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMA 292
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ AC L A + G +HA + + +++ D+ LG ALVDMYAKCG + A VF MP
Sbjct: 293 SLLLACTHLGALELGKWLHAYIKK-QRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGL 372
++V++ T+++ G A ++A F +M ++ + +++ ++A + G +E +
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 373 F---------------------------------RLLKRESVCPTHYTFGNLLNACANLA 399
F L+K + P + G LL AC
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHG 471
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+L+ +A +++ + S +V L ++Y E+ R E M ER
Sbjct: 472 NLEAAERAAKQLLE-----IDPYHSGTYV--LLSNIYKSSKKWEEAKRTRELMAER 520
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 62/358 (17%)
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FD +V+ S+ ++ S++ ARL+F+++ + N++I G T ++EAL
Sbjct: 18 FDPFTASKIVAFCSL----QESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEAL 73
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
++ + + + P YTF +L +C N ++ G+Q H H K G SD + N
Sbjct: 74 LFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGF------ASDTYAQN 124
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-K 489
+L++MY CG + ++F+ M ++ VSW MI AQ EA+ LF +M+ K
Sbjct: 125 TLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVK 184
Query: 490 PDHVTMIGVLCACSHA---GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
P+ VT++ VL AC+ A +V+ +Y EHG T ++D+ + GC+
Sbjct: 185 PNEVTLVNVLTACARARDLAMVKRIHEYID----EHGFGRHVVLNTVLMDVYCKCGCVQL 240
Query: 547 AKTL----------------------------------IEAMPMQPDAVIWGSLLAACKV 572
A+ L ++ ++ D V SLL AC
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300
Query: 573 HRNIMLGE----YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ LG+ Y+ K+ ++++ + V +MYA+ G ++V M ++ V+
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALV---DMYAKCGSIETAIQVFHEMPEKDVM 355
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 315/538 (58%), Gaps = 16/538 (2%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
K+G Q HA + + ++ + ++ MY G + A VFD + + + +NS+I
Sbjct: 93 IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152
Query: 227 YEQNGPASDA---LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
Y ++G LE + RM G+ D TL V+ +CA L+ G +H + +R
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRV-G 211
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L D +G +L+DMY KCG + +AR +FD+M +R++ S ++++GY K + A +F
Sbjct: 212 LEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFE 271
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES--VCPTHYTFGNLLNACANLADL 401
+M RN+VSW A+I+GYTQNG E+ALGLF + ++ + P T ++L ACA A L
Sbjct: 272 RMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAAL 331
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE--RDWVS 459
+ GR+ H GL S V +L MY KC S+ + F+ + + ++ ++
Sbjct: 332 ERGRRIHDFANGIGLHLNSS------VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIA 385
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WN MI A +G G EA+ +F+ ML G +PD VT +G+L CSH+GL++ G +F+ M
Sbjct: 386 WNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMG 445
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
H + P +HY C+VDLLGRAG L EAK LI MPMQ +WG+LLAAC+ HRN+ +
Sbjct: 446 TIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA 505
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E A++L +EP NSG YVLLSN+YAE G W EV ++R L++ +G+ K PGCSWIEI G
Sbjct: 506 ELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGK 565
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD--DEAYEEQNGSNSTSDCQ 695
++FM DK HP KEIY L+ L ++K GY+P+ S + EE+ N T+ +
Sbjct: 566 SHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSE 623
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L SC V R VH + ++ + ++ LID+Y KCG + ARK+FDKM
Sbjct: 185 PF--VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM 242
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+++ +WN++I G +K G I A LF M R+ SW +M+SG+ Q+ +ALG F
Sbjct: 243 IVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFD 302
Query: 141 KMHSENFALSE--YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+M + + + S L ACA S + G ++H + + + +AL MY K
Sbjct: 303 EMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAK 362
Query: 199 CGRVSCARRVFDGMRE--RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
C + AR FD + + +N+++WN++IT Y +G +A+ +F M+ +G++PD VT
Sbjct: 363 CYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFM 422
Query: 257 SVVSAC-------ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
++S C A L F + IH+ R E +VD+ + G+L EA+
Sbjct: 423 GLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYA-------CVVDLLGRAGRLVEAKE 475
Query: 310 VFDRMPIR 317
+ +MP++
Sbjct: 476 LISQMPMQ 483
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 167/415 (40%), Gaps = 91/415 (21%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F S +A + R + ++ HA+I+ F+ +++ +YA G L A
Sbjct: 74 FPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVV 133
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFD++ N + +NSII + G +
Sbjct: 134 VFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEA------------------------- 168
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ +MH ++ L +CA MG VH + D Y+G++LIDM
Sbjct: 169 ---YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 225
Query: 196 YGKCGRVSCARRVFDG-------------------------------MRERNIVSWNSLI 224
Y KCG + AR++FD M RNIVSW ++I
Sbjct: 226 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 285
Query: 225 TCYEQNGPASDALEVFVRMMASGIE--PDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+ Y QNG A AL +F M+ G E P+ VT+ SV+ ACA AA + G +IH
Sbjct: 286 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIH-DFANGI 344
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + + AL MYAKC L EARC FD M++ K
Sbjct: 345 GLHLNSSVQTALAGMYAKCYSLVEARCCFD------------MIAQNGK----------- 381
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
N+++WN +I Y +G EA+ +F + R V P TF LL+ C++
Sbjct: 382 ------NLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSH 430
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/597 (34%), Positives = 329/597 (55%), Gaps = 40/597 (6%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS- 144
F II L +D A+++F E D +N+M+ ++ A+ + KM +
Sbjct: 39 FIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRAC 98
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+N +Y++ ACA + G +VH ++ + Y D ++ S+L++ Y CG +
Sbjct: 99 QNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGN 158
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACA 263
A++VFD +++V WN+LIT Y + G D+ VF M+ + P+E T+ ++ AC
Sbjct: 159 AQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACI 218
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
K G IH +M+ LR + L AL+++Y KCG L+
Sbjct: 219 ESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLD------------------ 260
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
AR +F ++ E+N V WN+LI GY Q G E + L R + ++ P
Sbjct: 261 -------------GARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKP 307
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+T +L+ACA + LG H K G+ D+F+G +LIDMY KCG +
Sbjct: 308 DRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIW-------DVFIGTALIDMYAKCGFIG 360
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
++F+ M ER+ +WNA++ G A +G A+ LF +M G +PD +T + VL AC+
Sbjct: 361 AARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACA 420
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H+GLVE G++YF M + + + P +HY CMVDLLGRAG L EA+ LI+ M ++P+ V+W
Sbjct: 421 HSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVW 480
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL+AC +H NI +GE+ A ++++ + G YV+L+N+YA R+ V VR++M ++
Sbjct: 481 GALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEK 540
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDE 680
G+ K GCS IEI V+ F+V DK HP ++EIY VL L++++K GYVP + DE
Sbjct: 541 GICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAGYVPLLALDE 597
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 225/469 (47%), Gaps = 75/469 (15%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R+ + I+GD + PF + +C +V + VH I++ + + F+Q+ L++ Y
Sbjct: 96 RACQNILGDKY---TYPF--VFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFY 150
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
CG + A++VFD+ K+V WN++ITG + G + D+ +F M E + N
Sbjct: 151 MVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPN---- 206
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
E + + AC S + K+G +H + K
Sbjct: 207 --------------------------EGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLR 240
Query: 185 D-VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ V + +ALI++Y KCG + AR++FD + E+N V WNSLI Y Q G ++ +E+ M
Sbjct: 241 EGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREM 300
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
S ++PD T++ V+SACA + AF G +H R + + D+ +G AL+DMYAKCG
Sbjct: 301 HLSNLKPDRFTVSGVLSACAQMGAFNLGNWVH-RFAEKKGIW-DVFIGTALIDMYAKCGF 358
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ AR VFD+M RNV + +++SGYA +
Sbjct: 359 IGAARKVFDQMNERNVATWNAILSGYAS-------------------------------H 387
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G+ E A+ LF ++ P TF +L+ACA+ ++ G+Q ++++ E
Sbjct: 388 GQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEH 447
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
++D+ + G +++ + + M VE + V W A++ C+ +G
Sbjct: 448 Y-----GCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHG 491
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 175/366 (47%), Gaps = 37/366 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
L+ +C+ SK++ R +H ++K E + ++ LI++Y KCG L GARK+FD++ K
Sbjct: 213 LIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEK 272
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N WNS+I G + G +++ L +MH
Sbjct: 273 NTVVWNSLICGYCQIGSLNEVIELLR-------------------------------EMH 301
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
N ++ LSACA F +G VH K + DV++G+ALIDMY KCG +
Sbjct: 302 LSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEK-KGIWDVFIGTALIDMYAKCGFIG 360
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR+VFD M ERN+ +WN++++ Y +G A A+E+F M SG PD +T +V+ ACA
Sbjct: 361 AARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACA 420
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSE 322
+ G Q +++ K+ + +VD+ + G L EAR + M + NVV
Sbjct: 421 HSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVW 480
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVV---SWNALIAGYTQNGENEEALGLFRLLKRE 379
+++S + +++ M++ N + S+ L Y + ++ +
Sbjct: 481 GALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEK 540
Query: 380 SVCPTH 385
+C +H
Sbjct: 541 GICKSH 546
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 196/419 (46%), Gaps = 40/419 (9%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L+ + + Q+HA S S ++ + +I+ + + A +VF+ +E
Sbjct: 8 SVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEP 67
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQI 274
+ +N++I Y + A+ ++ +M A I D+ T V ACAS A ++G ++
Sbjct: 68 DGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEV 127
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H ++R D L ++L++ Y CG++ A+ VFD ++VV ++++GYA+
Sbjct: 128 HGVIVRI-GYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGM 186
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
V + +F +M+E + V P T L+ A
Sbjct: 187 VLDSFGVFKEMVE------------------------------VKEVRPNEGTMMGLIVA 216
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
C +L+LGR H +++K + + + +LI++Y+KCG ++ ++F+ + E
Sbjct: 217 CIESKNLKLGRAIHGYMMKDMVL-----REGVKLEAALINLYVKCGYLDGARKLFDEIPE 271
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
++ V WN++I G Q G E + L ++M L KPD T+ GVL AC+ G G +
Sbjct: 272 KNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLG-NW 330
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+++ G+ + T ++D+ + G + A+ + + M + + W ++L+ H
Sbjct: 331 VHRFAEKKGIWDVFIG-TALIDMYAKCGFIGAARKVFDQMN-ERNVATWNAILSGYASH 387
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/659 (35%), Positives = 343/659 (52%), Gaps = 71/659 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKM 80
L+S + S+S R VHA I+++ F+ N L+++Y+K A+ V
Sbjct: 10 LGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLT 69
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ + V TW S ++SG + RF+ AL +F
Sbjct: 70 NPRTVVTWTS-------------------------------LISGCVHNRRFTSALLHFS 98
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M E ++++F A A G Q+HAL K DV++G + DMY K G
Sbjct: 99 NMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTG 158
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
AR +FD M RN+ +WN+ ++ Q+G DA+ F + + EP+ +T + ++
Sbjct: 159 LRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLN 218
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA + + + G Q+H ++R + R D+ + N L+D Y KCG + + VF R
Sbjct: 219 ACADIVSLELGRQLHGFIVR-SRYREDVSVFNGLIDFYGKCGDIVSSELVFSR------- 270
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ S R RNVVSW +L+A QN E E A +F L R+
Sbjct: 271 --------------IGSGR--------RNVVSWCSLLAALVQNHEEERACMVF-LQARKE 307
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V PT + ++L+ACA L L+LGR H +K + E +IFVG++L+D+Y KCG
Sbjct: 308 VEPTDFMISSVLSACAELGGLELGRSVHALALKACV------EENIFVGSALVDLYGKCG 361
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL--CGEKPDHVTMIGV 498
S+E ++F M ER+ V+WNAMI G A G AL LF++M CG +VT++ V
Sbjct: 362 SIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSV 421
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS AG VE G + F SM +G+ P +HY C+VDLLGR+G +D A I+ MP+ P
Sbjct: 422 LSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILP 481
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+WG+LL ACK+H LG+ A+KL E++P +SG +V+ SNM A GRW E VRK
Sbjct: 482 TISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRK 541
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
MR G+ K G SW+ + V+VF KD H N EI +L L EMK+ GYVP+A+
Sbjct: 542 EMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDAN 600
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 282/472 (59%), Gaps = 44/472 (9%)
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWNSLI + G DAL F +M + ++ DE TL SV+++ AS+ + + +H
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++ LV NAL+DMYAK GKL+
Sbjct: 67 IIKTGFEAYKLV-NNALIDMYAKQGKLD-------------------------------C 94
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
A ++F+KM++++VVSW +L+ GY+ NG EEA+ LF ++ V P ++L+ACA
Sbjct: 95 AIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAE 154
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
L + G+Q H +VK GL ES + V NSL+ MY KCGS+ D R F+ M RD
Sbjct: 155 LTVMDFGQQIHATLVKSGL------ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDV 208
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
+SW A+IVG AQNG G +L + +M+ G KPD++T IG+L ACSH GL+ GR YF +
Sbjct: 209 ISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEA 268
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
M K +G+ P +HY CM+DLLGR+G L EAK L+ M + PDAV+W +LLAAC+VH+ +
Sbjct: 269 MDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELE 328
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LGE AK L E+EP NS PYV+LSNMY+ G+W + R+R+LMR RG+ K+PG SWIE
Sbjct: 329 LGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETN 388
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
V+ FM +D+ HPL EIY + + +K GYVP+ S DDE E
Sbjct: 389 SKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMSFALHDTDDEVKE 440
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 40/355 (11%)
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D+ SWNS++ G + +AL +F KM S + + EY+ S L++ A + VH
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
L+ K+ + + + +ALIDMY K G++ CA VF M ++++VSW SL+T Y NG
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+A+++F +M SG+ PD++ +ASV+SACA L G QIHA L++ L + L + N+L
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVK-SGLESSLSVDNSL 183
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V MYAKCG + +A FD MP R+V+S T+++ GYA
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYA------------------------ 219
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK- 413
QNG + +L + + P + TF LL AC++ L GR + K
Sbjct: 220 -------QNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKV 272
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+G++ G E +ID+ + G + + + M V D V W A++ C
Sbjct: 273 YGIK--PGPEH----YACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAAC 321
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 172/374 (45%), Gaps = 43/374 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D +L+S K + + VH IIK+ F + + N LID+YAK G L
Sbjct: 39 IDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKL------ 92
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D A +F+ M ++D SW S+V+G++ + + EA+
Sbjct: 93 -------------------------DCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KM + + S LSACA G Q+HA L KS S + + ++L+ MY
Sbjct: 128 KLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMY 187
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A R FD M R+++SW +LI Y QNG +L+ + +M+A+G +PD +T
Sbjct: 188 AKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFI 247
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ AC+ G + + ++ ++D+ + GKL EA+ + ++M
Sbjct: 248 GLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM-- 305
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNV--------VSWNALIAGYTQNGENEE 368
VV+ ++V A+ L +M +N+ + + L Y+ G+ E+
Sbjct: 306 --VVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWED 363
Query: 369 ALGLFRLLKRESVC 382
A + RL++ +C
Sbjct: 364 AARIRRLMRSRGIC 377
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 232/680 (34%), Positives = 352/680 (51%), Gaps = 74/680 (10%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
+A Q ++G L A LL + R S+ ++HA ++K F S+ + N L
Sbjct: 182 VAIQLRAIDLLGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNL 241
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
ID+YAKCG L+ A +VFD MPER+ SW
Sbjct: 242 IDMYAKCGKLHMAGEVFD-------------------------------GMPERNVVSWT 270
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+++ GF H E L F +M + +E++ + L AC G + G Q+H + ++
Sbjct: 271 ALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRT 328
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ + ++L+ MY K ARRVFD + RN+ +WNS+I+ Y G D+L VF
Sbjct: 329 GFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVF 388
Query: 241 VRMMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMY 298
M E PDE T AS++ AC+ L A +EG Q+HA + +R ++ +L AL+D+Y
Sbjct: 389 REMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVY 448
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
KC R+P+ A +F + RN + W +I
Sbjct: 449 VKC----------HRLPV---------------------AMQVFDGLERRNAIQWTTVIV 477
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G+ Q G+ +EA+ LFR V + +++ A+ A ++ G+Q H + K
Sbjct: 478 GHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAK----- 532
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ D+ V NSL+DMY+KCG + R F M R+ VSW AMI G ++G+G EA+
Sbjct: 533 -TPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAID 591
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
LF++M G + D V + +L ACSH+GLV+E R+YFS + ++ + P +HY CMVDLL
Sbjct: 592 LFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLL 651
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EAK LI +MPM+P +W +LL+AC+VH+++ +G V LL ++ N YV
Sbjct: 652 GRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYV 711
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM-VKDKRHPLNKEIY 657
+LSN+ AE G W E +R MR++G+ KQ GCSW E+ V+ F D HP +I
Sbjct: 712 MLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIR 771
Query: 658 LVLKMLTREMK-RVGYVPNA 676
L+ + M+ R+GY +A
Sbjct: 772 RALREVEARMRERLGYSGDA 791
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 330/576 (57%), Gaps = 47/576 (8%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
R F+S P +S + R EAL + E + + + + L+AC
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPE---MGFHGYDALLNACLDKR 66
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ G +VHA + K+RY Y+ + L+ YGKC + AR+V D M E+N+VSW ++I+
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q G +S+AL VF MM S +P+E T A+V+++C + G QIH +++
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW-NYD 185
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ + +G++L+DMYAK A +K AR +F +
Sbjct: 186 SHIFVGSSLLDMYAK-------------------------------AGQIKEAREIFECL 214
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
ER+VVS A+IAGY Q G +EEAL +F L E + P + T+ +LL A + LA L G+
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
QAH HV++ L F + + NSLIDMY KCG++ R+F+ M ER +SWNAM+V
Sbjct: 275 QAHCHVLRRELPFYA------VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 466 GCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHAGLVEEGRKYFSSM-SKE 521
G +++G G E L LF+ L+ EK PD VT++ VL CSH + + G F M + E
Sbjct: 329 GYSKHGLGREVLELFR--LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+G P +HY C+VD+LGRAG +DEA I+ MP +P A + GSLL AC+VH ++ +GE
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
V ++L+EIEP N+G YV+LSN+YA GRW +V VR +M ++ V K+PG SWI+ ++
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 642 VFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
F D+ HP +E+ +K ++ +MK+ GYVP+ S
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 64/377 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL++CL +++ D +RVHA +IK+++ +++ RL+ Y KC CL ARKV D+M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 113
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
PE++ SW +M+S ++Q SEAL F +
Sbjct: 114 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++F + L++C + +G Q+H L+ K Y S +++GS+L+DMY K G+
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +F+ + ER++VS ++I Y Q G +ALE+F R+ + G+ P+ VT AS+++A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LA G Q H ++R E L VL N+L+DMY+KCG L+ AR +FD MP R +S
Sbjct: 264 LSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
WNA++ GY+++G E L LFRL++ E
Sbjct: 323 -------------------------------WNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 381 VCPTHYTFGNLLNACAN 397
V P T +L+ C++
Sbjct: 352 VKPDAVTLLAVLSGCSH 368
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L SC+R+ + +++H I+K + S IF+ + L+D+YAK G + AR++F+ +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V + +II +G+AQ EAL F +
Sbjct: 216 ERDVVSCTAII-------------------------------AGYAQLGLDEEALEMFHR 244
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+HSE + + ++ S L+A +G G Q H + + + ++LIDMY KCG
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTLASVV 259
+S ARR+FD M ER +SWN+++ Y ++G + LE+F R+M ++PD VTL +V+
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Query: 260 SACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S C+ GL I ++ E + +VDM + G+++EA RMP
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 327/633 (51%), Gaps = 108/633 (17%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRR----VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
SS +C SV+ R +HA +++ F S+ + N LID+Y KC +
Sbjct: 246 SSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEM---- 301
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
D+A ++F S+P SWN +++GF Q ++
Sbjct: 302 ---------------------------DEAVKVFESLPSVTIVSWNILITGFGQEGSCAK 334
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A+ M F +E ++ + L++C + D
Sbjct: 335 AVEVLSLMQEAGFEPNEVTYSNLLASCIKARD---------------------------- 366
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
V AR +FD + ++ +WN+L++ Y Q D +E+F RM ++PD T
Sbjct: 367 -------VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 419
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
LA ++S+C+ L G Q+H+ +R L ND+ + + LVDMY+KCG++ AR +
Sbjct: 420 LAVILSSCSKLGILDFGRQVHSASVRF-LLHNDMFVASGLVDMYSKCGQIGIARSI---- 474
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
F KM ER+VV WN++I+G T + N+EA F+
Sbjct: 475 ---------------------------FNKMTERDVVCWNSIISGLTIHSLNKEAFDFFK 507
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ + PT ++ +++N+C+ L+ + GRQ H V+K G + +++VG++LID
Sbjct: 508 QMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGY------DQNVYVGSALID 561
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG+++D F+TM+ ++ V+WN MI G AQNG G +A+ LF+ ML +KPD VT
Sbjct: 562 MYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVT 621
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I VL CSH+GLV++ +F+SM +G+ PL +HYTC++D LGRAG E + LI M
Sbjct: 622 FIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKM 681
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P + D +IW LLAAC VH N LG+ A+ L I+P N PYVLLSN+YA LGR G+
Sbjct: 682 PCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDAS 741
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
VR LM RGVVK G SWI+ V FMV D
Sbjct: 742 AVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 288/566 (50%), Gaps = 67/566 (11%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
+ F+ NRL+++Y++ G A F + + N +++N+ ++ + G +D A L MP
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101
Query: 113 ERDQCSWNSMVSGFAQHD-RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
R+ SWN+++S A+ EA+ + +M +E + ++ S LSAC G G
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+ H + K ++ ++ +AL+ MY KCG V A R+F GM N VS+ +++ Q G
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTG 221
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACA-------SLA-AFKEGLQIHARLMRCEK 283
DAL +F RM SG+ D V+++SV+ ACA S+A AF+ G IHA ++R +
Sbjct: 222 SIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVR-KG 280
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA------------- 330
+D +GN+L+DMY KC +++EA VF+ +P +VS +++G+
Sbjct: 281 FGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLS 340
Query: 331 ----------------------KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
KA V SAR MF K+ +V +WN L++GY Q ++++
Sbjct: 341 LMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQD 400
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+ LFR ++ ++V P T +L++C+ L L GRQ H+ V RFL +D+FV
Sbjct: 401 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASV----RFLL--HNDMFV 454
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
+ L+DMY KCG + IF M ERD V WN++I G + EA FK+M G
Sbjct: 455 ASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGI 514
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------TCMVDLLGRA 541
P + ++ +CS + GR+ + + +KD Y + ++D+ +
Sbjct: 515 MPTESSYASMINSCSRLSSIPHGRQIHAQV--------MKDGYDQNVYVGSALIDMYAKC 566
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLL 567
G +D+A+ + M M+ + V W ++
Sbjct: 567 GNMDDARLFFDTMMMK-NIVAWNEMI 591
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 146/301 (48%), Gaps = 31/301 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC + + R+VH+ ++ +++F+ + L+D+Y+KCG + AR +F
Sbjct: 416 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 475
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM+ ++V WNSII+GL H EA
Sbjct: 476 NKMTERDVVCWNSIISGL-------------------------------TIHSLNKEAFD 504
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +E S+ S +++C+ G Q+HA + K Y +VY+GSALIDMY
Sbjct: 505 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 564
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR FD M +NIV+WN +I Y QNG A+E+F M+ + +PD VT +
Sbjct: 565 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIA 624
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ C+ + + + + L+D + G+ E + +MP +
Sbjct: 625 VLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCK 684
Query: 318 N 318
+
Sbjct: 685 D 685
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/667 (32%), Positives = 353/667 (52%), Gaps = 80/667 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++S+ + +L C+ K VSD +++HA I+K+ + F+ L++VYAKCG + ARKV
Sbjct: 67 VESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKV 126
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +P R+ SW ++++G+ + A+
Sbjct: 127 -------------------------------FDELPRRNVVSWTTLMTGYVHDSKPELAV 155
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + Y+ G+ALSA + ++G Q+H K R D +G++L +Y
Sbjct: 156 QVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLY 215
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + CA + F +R++N++SW ++I+ + NG A+ L+ FV M++ +EP+E TL
Sbjct: 216 SKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLT 275
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S +S C + + G QIH+ ++ ++L + N+++ +Y KCG ++EA+
Sbjct: 276 SALSLCCVMQSLDIGTQIHSLTIKL-GFESNLPIKNSIMYLYLKCGWIHEAK-------- 326
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE----------- 365
+F +M ++V+WNA+IAG+ + +
Sbjct: 327 -----------------------KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQC 363
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EAL +F L R + P +TF ++L+ C++L L+ G Q H +K G FLS D
Sbjct: 364 GTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTG--FLS----D 417
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ VG +L++MY KCGS+E + F M R +SW +MI G AQNG +AL LF+ M L
Sbjct: 418 VVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRL 477
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G +P+ +T +GVL ACSHAG+V+E YF M E+ + P+ DHY C++D+ R G LD
Sbjct: 478 AGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLD 537
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EA I+ M ++P+ IW L+A C+ + LG Y A++LL ++P ++ Y LL NMY
Sbjct: 538 EAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYL 597
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
G+W EV RVRK+M++ + + SWI I + F + H + E+Y +L L
Sbjct: 598 SAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHE 657
Query: 666 EMKRVGY 672
+ K GY
Sbjct: 658 KAKSFGY 664
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/616 (34%), Positives = 344/616 (55%), Gaps = 75/616 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG-ARKVFDKM 80
+A LL +C + + + ++HA +IKS + F+ N L+ +Y K G + RKVFD +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K+V SW SM+SG+ + + +L F
Sbjct: 181 FVKDVI-------------------------------SWTSMISGYVRVGKPMNSLELFW 209
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM + + ++ + + AC+ D K+G H ++ + S+ + SALIDM+G+
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 269
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVV 259
+ AR++FD + E + + W S+I+ +N +AL F M G+ PD T +V+
Sbjct: 270 ALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVL 329
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+AC +L K+G ++HA+++ N +V+ ++LVDMY KCG + E++ +FDRMPI+N
Sbjct: 330 TACGNLGRLKQGKEVHAKVITTGFCGN-VVVESSLVDMYGKCGSVGESQRIFDRMPIKNS 388
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS ++++ GY QNG+ + + +FR +++
Sbjct: 389 VSWSALLGGYC-------------------------------QNGDFKSVIQIFRKMEKV 417
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ Y FG +L CA LA ++ G++ H ++ G D+ V ++L+D+Y KC
Sbjct: 418 DL----YCFGTILRTCAGLAAVRQGKEVHCQYIR------KGGWRDVIVESALVDLYAKC 467
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G +E IF+ M R+ ++WN+MI G AQNG G EAL +F +M+ G KPD+++ IG+L
Sbjct: 468 GCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGIL 527
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH GLV+EGR+YF SM+K++G+ +HY+CMVDLLGRAG L+EA+ LIE + D
Sbjct: 528 FACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDD 587
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ +W +LL AC N + E +AK+++E+EP YVLL+N+Y +GRW + +R+R+L
Sbjct: 588 SSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRL 647
Query: 620 MRKRGVVKQPGCSWIE 635
M+ RGV K PG SWIE
Sbjct: 648 MKDRGVNKMPGKSWIE 663
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 172/368 (46%), Gaps = 39/368 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C + + VHA++I + F + +++ L+D+Y KCG
Sbjct: 321 DGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGS-------- 372
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++ R+F MP ++ SW++++ G+ Q+ F +
Sbjct: 373 -----------------------VGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQ 409
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM + Y FG+ L CAG + G +VH + DV + SAL+D+Y
Sbjct: 410 IFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYA 465
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A+ +FD M RN+++WNS+I + QNG +AL +F +M+ GI+PD ++
Sbjct: 466 KCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIG 525
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ EG + + + ++ + + +VD+ + G L EA + + R
Sbjct: 526 ILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFR 585
Query: 318 NVVS-ETSMVSGYAKASSVKSARLMFTKMLERNV---VSWNALIAGYTQNGENEEALGLF 373
+ S +++ ++ + A + +++E +S+ L Y G +AL +
Sbjct: 586 DDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIR 645
Query: 374 RLLKRESV 381
RL+K V
Sbjct: 646 RLMKDRGV 653
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 190/413 (46%), Gaps = 85/413 (20%)
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
++G S AL++ + I V AS++ C + AF GLQIHA +++ L D
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIK-SGLEFDR 153
Query: 289 VLGNALVDMYAKCGK-LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML- 346
+GN+L+ +Y K G E R VFD + +++V+S TSM+SGY + ++ +F KML
Sbjct: 154 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 213
Query: 347 --------------------------------------ERNVVSWNALIAGYTQNGENEE 368
+ N V +ALI + +N ++
Sbjct: 214 YGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 273
Query: 369 ALGLF-RLLKRESVC-------------------------------PTHYTFGNLLNACA 396
A LF LL+ +++C P +TFG +L AC
Sbjct: 274 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 333
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
NL L+ G++ H V+ G ++ V +SL+DMY KCGSV + RIF+ M ++
Sbjct: 334 NLGRLKQGKEVHAKVITTGFC------GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKN 387
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSW+A++ G QNG + +F+KM EK D +L C+ V +G++
Sbjct: 388 SVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHC 443
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++ G + + +VDL + GC++ A+T+ + MP++ + + W S++
Sbjct: 444 QYIRKGGWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGG 494
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+SV QI + +D F +L +C +V + VH + I+ ++ +++ L+D+Y
Sbjct: 405 KSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLY 464
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWN 120
AKCGC+ A+ +FD+M +N+ TWNS+I G + G ++A R+F M + D S+
Sbjct: 465 AKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFI 524
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSE---NFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
++ + E YF+ M + + YS L AG ++ + L+
Sbjct: 525 GILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLE-----EAEILI 579
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI---VSWNSLITCYEQNGPAS 234
S + D + +AL+ C A R+ + E +S+ L Y+ G +
Sbjct: 580 ETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWN 639
Query: 235 DALEVFVRMMASGI 248
DAL + M G+
Sbjct: 640 DALRIRRLMKDRGV 653
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 339/610 (55%), Gaps = 50/610 (8%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K + NS+I LK G + A LF + +WNSM+SG+A + EALG F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M LSE SF S + CA + + Q+H + K + D + +AL+ Y KC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 202 VSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A R+F + N+VSW ++I+ + QN +A+++F M G+ P+E T + +++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A ++ ++HA++++ R+ V G AL+D Y K GK+ E
Sbjct: 406 ALPVISP----SEVHAQVVKTNYERSSTV-GTALLDAYVKLGKVEE-------------- 446
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
A +F+ + ++++V+W+A++AGY Q GE E A+ +F L +
Sbjct: 447 -----------------AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 381 VCPTHYTFGNLLNACANL-ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P +TF ++LN CA A + G+Q H +K L +S + V ++L+ MY K
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL------DSSLCVSSALLTMYAKK 543
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++E +F+ E+D VSWN+MI G AQ+G +AL +FK+M K D VT IGV
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAGLVEEG KYF M ++ +AP K+H +CMVDL RAG L++A +IE MP
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ IW ++LAAC+VH+ LG A+K++ ++P +S YVLLSNMYAE G W E +VRKL
Sbjct: 664 STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKL 723
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
M +R V K+PG SWIE+ F+ D+ HPL +IY+ L+ L+ +K +GY P+ S
Sbjct: 724 MNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 783
Query: 678 ----DDEAYE 683
DDE E
Sbjct: 784 LQDIDDEHKE 793
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 227/475 (47%), Gaps = 59/475 (12%)
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
+A LF P RD+ S+ S++ GF++ R EA F+ +H + F S L A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
D G Q+H K + DV +G++L+D Y K R+VFD M+ERN+V+W +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
LI+ Y +N + L +F+RM G +P+ T A+ + A GLQ+H +++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK-N 223
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + + N+L+++Y KCG + +AR +FD+ +++VV+ SM+SGYA
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA------------ 271
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
NG + EALG+F ++ V + +F +++ CANL +L+
Sbjct: 272 -------------------ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDWVSWN 461
Q H VVK+G F D + +L+ Y KC ++ D R+F E + VSW
Sbjct: 313 FTEQLHCSVVKYGFLF------DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-------HAGLVEEGRKY 514
AMI G QN EA+ LF +M G +P+ T +L A HA +V+ +
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 426
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S++ T ++D + G ++EA + + D V W ++LA
Sbjct: 427 SSTVG------------TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 43/375 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S FA ++ C K + T ++H ++K F + I+ L+ Y+KC + A ++
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 77 FDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F ++ NV +W ++I+G F Q+D EA
Sbjct: 353 FKEIGCVGNVVSWTAMISG-------------------------------FLQNDGKEEA 381
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F +M + +E+++ L+A + ++VHA + K+ Y +G+AL+D
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDA 437
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G+V A +VF G+ +++IV+W++++ Y Q G A+++F + GI+P+E T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 256 ASVVSACASL-AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+S+++ CA+ A+ +G Q H ++ +L + L + +AL+ MYAK G + A VF R
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEAL 370
+++VS SM+SGYA+ A +F +M +R V V++ + A T G EE
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 371 GLFRLLKRE-SVCPT 384
F ++ R+ + PT
Sbjct: 617 KYFDIMVRDCKIAPT 631
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 38/304 (12%)
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
R+ A +FD R+ S+ SL+ + ++G +A +F+ + G+E D +SV+
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A+L G Q+H + ++ L +D+ +G +LVD Y
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYM--------------------- 139
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
K S+ K R +F +M ERNVV+W LI+GY +N N+E L LF ++ E
Sbjct: 140 ----------KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +TF L A G Q HT VVK+GL + I V NSLI++Y+KCG
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL------DKTIPVSNSLINLYLKCG 243
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+V +F+ + V+WN+MI G A NG EALG+F M L + + V+
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 501 ACSH 504
C++
Sbjct: 304 LCAN 307
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA+++K+ + + L+D Y K G + A KVF + +K++ W
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW------------ 462
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++M++G+AQ A+ F ++ +E++F S L+
Sbjct: 463 -------------------SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 161 CAGS-VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
CA + G Q H KSR S + + SAL+ MY K G + A VF RE+++VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WNS+I+ Y Q+G A AL+VF M ++ D VT V +AC +EG + ++
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
R K+ + +VD+Y++ G+L +A V + MP
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
G +S + +A +F K R+ S+ +L+ G++++G +EA LF + R +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F ++L A L D GRQ H +K G FL D+ VG SL+D YMK + +DG +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFG--FLD----DVSVGTSLVDTYMKGSNFKDGRK 149
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M ER+ V+W +I G A+N E L LF +M G +P+ T L + G+
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
G + + + K +GL +++L + G + +A+ L + ++ V W S++
Sbjct: 210 GGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
Query: 568 AA 569
+
Sbjct: 268 SG 269
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 22 FAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F+ +L+ C + S+ ++ H IKS+ S + + + L+ +YAK G + A +VF +
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K++ +WNS+I SG+AQH + +AL F
Sbjct: 557 REKDLVSWNSMI-------------------------------SGYAQHGQAMKALDVFK 585
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKC 199
+M + +F +AC + + G + ++ + + + S ++D+Y +
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 200 GRVSCARRVFDGM 212
G++ A +V + M
Sbjct: 646 GQLEKAMKVIENM 658
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/529 (38%), Positives = 307/529 (58%), Gaps = 11/529 (2%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
S+ G K+G QVHA + +GS ++ Y G + + VF+G+
Sbjct: 72 SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E + + +NS+I Y + G A + + M + G D T V+ + L + G
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+H ++R L+ DL + +L+ +Y KCG++N+A VFD M IR+V S ++++GY K+
Sbjct: 192 CVHGLILRI-GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS 250
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE--SVCPTHYTFGN 390
+ +A +F +M RN+VSW +I+GY+Q+G ++AL LF + +E V P T +
Sbjct: 251 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L ACA L+ L+ GRQ H + GL S+ V +L MY KCGS+ D F+
Sbjct: 311 VLPACAQLSTLERGRQIHELACRMGL------NSNASVLIALTAMYAKCGSLVDARNCFD 364
Query: 451 TMV--ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
+ E++ ++WN MI A G+G +A+ F++M+ G +PD +T G+L CSH+GLV
Sbjct: 365 KLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLV 424
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ G KYF+ MS + + P +HY C+ DLLGRAG L EA L+ MPM IWGSLLA
Sbjct: 425 DVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLA 484
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC+ HRN+ + E A+KL +EP N+G YVLLSNMYAE GRW EV ++R +++ +G K
Sbjct: 485 ACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKS 544
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
PGCSWIEI G ++F+ D HP KEIY+ L+ L +MK GY P+ S
Sbjct: 545 PGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTS 593
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 155/303 (51%), Gaps = 4/303 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L S + SV + VH I++ ++++ LI +Y KCG + A KVF
Sbjct: 170 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 229
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M+ ++V +WN+++ G K G ID A +F MP R+ SW +M+SG++Q +AL
Sbjct: 230 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289
Query: 138 YFVKMHSENFALSE--YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F +M E+ + + S L ACA + G Q+H L + +S+ + AL M
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349
Query: 196 YGKCGRVSCARRVFDGM--RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y KCG + AR FD + E+N+++WN++IT Y G A+ F M+ +GI+PD++
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++S C+ GL+ + + + + D+ + G+L EA +
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGE 469
Query: 314 MPI 316
MP+
Sbjct: 470 MPM 472
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 63/346 (18%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G ID + +F + E +NSM+ +A++ + + MHS F ++F L
Sbjct: 119 GDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVL 178
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR----- 213
+ + MG VH L+ + D+Y+ ++LI +YGKCG ++ A +VFD M
Sbjct: 179 KSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVS 238
Query: 214 --------------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-- 245
RNIVSW ++I+ Y Q+G A AL +F M+
Sbjct: 239 SWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKED 298
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
SG+ P+ VT+ SV+ ACA L+ + G QIH R N VL AL MYAKCG L
Sbjct: 299 SGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVL-IALTAMYAKCGSLV 357
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+AR FD++ RN E+N+++WN +I Y G
Sbjct: 358 DARNCFDKLN-RN----------------------------EKNLIAWNTMITAYASYGH 388
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
+A+ FR + + + P TF LL+ C++ + +G + H+
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 434
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 34/200 (17%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P ++ + L L+LG Q H H++ GL + VG+ ++ Y G +
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGL------QPTALVGSKMVAFYASSGDI 121
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA- 501
+ +F + E + +N+MI A+ G+ + + M G D+ T VL +
Sbjct: 122 DSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSS 181
Query: 502 ----------CSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKT 549
C H ++ G ++ D Y T ++ L G+ G +++A
Sbjct: 182 VELLSVWMGKCVHGLILRIGLQF--------------DLYVATSLIILYGKCGEINDAGK 227
Query: 550 LIEAMPMQPDAVIWGSLLAA 569
+ + M ++ D W +LLA
Sbjct: 228 VFDNMTIR-DVSSWNALLAG 246
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/616 (34%), Positives = 344/616 (55%), Gaps = 75/616 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG-ARKVFDKM 80
+A LL +C + + + ++HA +IKS + F+ N L+ +Y K G + RKVFD +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K+V SW SM+SG+ + + +L F
Sbjct: 122 FVKDVI-------------------------------SWTSMISGYVRVGKPMNSLELFW 150
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM + + ++ + + AC+ D K+G H ++ + S+ + SALIDM+G+
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNC 210
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVV 259
+ AR++FD + E + + W S+I+ +N +AL F M G+ PD T +V+
Sbjct: 211 ALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVL 270
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+AC +L K+G ++HA+++ N +V+ ++LVDMY KCG + E++ +FDRMPI+N
Sbjct: 271 TACGNLGRLKQGKEVHAKVITTGFCGN-VVVESSLVDMYGKCGSVGESQRIFDRMPIKNS 329
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS ++++ GY QNG+ + + +FR +++
Sbjct: 330 VSWSALLGGYC-------------------------------QNGDFKSVIQIFRKMEKV 358
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ Y FG +L CA LA ++ G++ H ++ G D+ V ++L+D+Y KC
Sbjct: 359 DL----YCFGTILRTCAGLAAVRQGKEVHCQYIR------KGGWRDVIVESALVDLYAKC 408
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G +E IF+ M R+ ++WN+MI G AQNG G EAL +F +M+ G KPD+++ IG+L
Sbjct: 409 GCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGIL 468
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH GLV+EGR+YF SM+K++G+ +HY+CMVDLLGRAG L+EA+ LIE + D
Sbjct: 469 FACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDD 528
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ +W +LL AC N + E +AK+++E+EP YVLL+N+Y +GRW + +R+R+L
Sbjct: 529 SSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRL 588
Query: 620 MRKRGVVKQPGCSWIE 635
M+ RGV K PG SWIE
Sbjct: 589 MKDRGVNKMPGKSWIE 604
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 172/368 (46%), Gaps = 39/368 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C + + VHA++I + F + +++ L+D+Y KCG
Sbjct: 262 DGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGS-------- 313
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++ R+F MP ++ SW++++ G+ Q+ F +
Sbjct: 314 -----------------------VGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQ 350
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM + Y FG+ L CAG + G +VH + DV + SAL+D+Y
Sbjct: 351 IFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYA 406
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A+ +FD M RN+++WNS+I + QNG +AL +F +M+ GI+PD ++
Sbjct: 407 KCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIG 466
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ EG + + + ++ + + +VD+ + G L EA + + R
Sbjct: 467 ILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFR 526
Query: 318 NVVS-ETSMVSGYAKASSVKSARLMFTKMLERNV---VSWNALIAGYTQNGENEEALGLF 373
+ S +++ ++ + A + +++E +S+ L Y G +AL +
Sbjct: 527 DDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIR 586
Query: 374 RLLKRESV 381
RL+K V
Sbjct: 587 RLMKDRGV 594
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 190/413 (46%), Gaps = 85/413 (20%)
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
++G S AL++ + I V AS++ C + AF GLQIHA +++ L D
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIK-SGLEFDR 94
Query: 289 VLGNALVDMYAKCGK-LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML- 346
+GN+L+ +Y K G E R VFD + +++V+S TSM+SGY + ++ +F KML
Sbjct: 95 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 154
Query: 347 --------------------------------------ERNVVSWNALIAGYTQNGENEE 368
+ N V +ALI + +N ++
Sbjct: 155 YGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDD 214
Query: 369 ALGLF-RLLKRESVC-------------------------------PTHYTFGNLLNACA 396
A LF LL+ +++C P +TFG +L AC
Sbjct: 215 ARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 274
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
NL L+ G++ H V+ G ++ V +SL+DMY KCGSV + RIF+ M ++
Sbjct: 275 NLGRLKQGKEVHAKVITTGFC------GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKN 328
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSW+A++ G QNG + +F+KM EK D +L C+ V +G++
Sbjct: 329 SVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHC 384
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++ G + + +VDL + GC++ A+T+ + MP++ + + W S++
Sbjct: 385 QYIRKGGWRDVIVE-SALVDLYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGG 435
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+SV QI + +D F +L +C +V + VH + I+ ++ +++ L+D+Y
Sbjct: 346 KSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLY 405
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWN 120
AKCGC+ A+ +FD+M +N+ TWNS+I G + G ++A R+F M + D S+
Sbjct: 406 AKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFI 465
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSE---NFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
++ + E YF+ M + + YS L AG ++ + L+
Sbjct: 466 GILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLE-----EAEILI 520
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI---VSWNSLITCYEQNGPAS 234
S + D + +AL+ C A R+ + E +S+ L Y+ G +
Sbjct: 521 ETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWN 580
Query: 235 DALEVFVRMMASGI 248
DAL + M G+
Sbjct: 581 DALRIRRLMKDRGV 594
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/589 (36%), Positives = 330/589 (56%), Gaps = 45/589 (7%)
Query: 104 ASRLF--ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-FALSEYSFGSALSA 160
A RLF P R S+N ++ F + +AL FV+M + + +++ + + +
Sbjct: 121 AIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKS 180
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C+ D +G V A K + D ++ ++LI MY CG V A +F ++ + +++W
Sbjct: 181 CSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAW 240
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N++I Y +NG + +E+F M+ DEVTL SV +AC L
Sbjct: 241 NAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLG-------------- 286
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
D LG + + + G L RN+ T++V YAK + AR
Sbjct: 287 ------DANLGQWIAEYAEEKGMLRS----------RNLA--TALVDMYAKCGELDKARR 328
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F +M R+VV+W+A+I+GYTQ+ EAL +F ++ V P T ++L+ACA L
Sbjct: 329 LFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGA 388
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G+ H+++ + L + +G +L+D Y KCG ++D + FE+M R+ +W
Sbjct: 389 LETGKWVHSYIRRKDLPL------TVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTW 442
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+I G A NG EAL LF ML +P VT IGVL ACSH LVEEGR++F+SM++
Sbjct: 443 TALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQ 502
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
++G+ P +HY CMVDLLGRAG +DEA I MP++P+AV+W +LL+AC VH+N+ +GE
Sbjct: 503 DYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGE 562
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
K+++ ++P +SG Y+LLSN YA +G+W VRK M+++GV K PGCS IE+ G +
Sbjct: 563 EALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTI 622
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD----EAYEEQ 685
F +D HP EIY + + +K VGY+PN +D + YE+Q
Sbjct: 623 FEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQ 671
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 208/464 (44%), Gaps = 72/464 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A + SC R +S R V A K F + F+ N LI +YA CG + A +F
Sbjct: 170 DQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLF 229
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K V +WN+M++G+ ++ + E +
Sbjct: 230 HTVQVKGVI-------------------------------AWNAMIAGYVKNGDWKEVVE 258
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M E + S +AC D +G + + + +AL+DMY
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA 318
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + ARR+FD M R++V+W+++I+ Y Q+ +AL +F M + + P++VT+ S
Sbjct: 319 KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVS 378
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SACA L A + G +H+ + R + L ++LG ALVD YAKCG + +A F+ MP+R
Sbjct: 379 VLSACAVLGALETGKWVHSYIRR-KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR 437
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N + T+++ G A + A +F+ MLE N+
Sbjct: 438 NTWTWTALIKGMASNGRSREALELFSSMLEANIE-------------------------- 471
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
PT TF +L AC++ ++ GR+ T + + G I ++D+
Sbjct: 472 -----PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQD-----YGICPRIEHYGCMVDLLG 521
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG---YGTEAL 477
+ G +++ + M +E + V W A++ C + G EAL
Sbjct: 522 RAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEAL 565
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 344/662 (51%), Gaps = 80/662 (12%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
++ + +H + +S + + L YA+ G LY A++VFD+ +
Sbjct: 240 TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAA------------ 287
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
ERD SWN+M+ +AQH SEA F +M E + S+ +
Sbjct: 288 -------------------ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+A + C+ + G +H + D+ +G+AL+DMY +CG AR +F +
Sbjct: 329 LVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI- 384
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS----LAAFK 269
N VSWN++I Q G A+E+F RM G+ P T +++ A AS A
Sbjct: 385 PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMA 444
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
EG ++H+R++ C ++ +G A+V MYA CG ++EA F R + +
Sbjct: 445 EGRKLHSRIVSC-GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED----------- 492
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
+VVSWNA+I+ +Q+G + ALG FR + V P T
Sbjct: 493 -----------------RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+L+ACA A L G H H+ +H SG ES++FV +L MY +CGS+E IF
Sbjct: 536 AVLDACAGAAALTEGEIVHDHL-RH-----SGMESNLFVATALASMYGRCGSLESAREIF 589
Query: 450 ETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
E + VERD V +NAMI +QNG EAL LF +M G +PD + + VL ACSH GL
Sbjct: 590 EKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLA 649
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+EG + F SM + +G+AP +DHY C VD+LGRAG L +A+ LI M ++P ++W +LL
Sbjct: 650 DEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLG 709
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC+ +R++ G + E++P + YV+LSN+ A G+W E VR M RG+ K+
Sbjct: 710 ACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKE 769
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA-----SDDEAYE 683
G SWIEI V+ F+ D+ HP ++EIY L+ L E++ +GYVP+ DEA +
Sbjct: 770 AGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEK 829
Query: 684 EQ 685
E+
Sbjct: 830 ER 831
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 272/559 (48%), Gaps = 85/559 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C R +S R +HA I++S + + N L+ +Y CGC+ A +F
Sbjct: 127 DAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLF 186
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM ERD SWN+ ++ AQ AL
Sbjct: 187 EKM--------------------------------ERDLVSWNAAIAANAQSGDLGIALE 214
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E + + AL+ CA + +H ++ +S + + +AL Y
Sbjct: 215 LFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYA 271
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + A+ VFD ER++VSWN+++ Y Q+G S+A +F RM+ GI P +VTL +
Sbjct: 272 RLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVN 331
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ C+SL + G IH + + L D+VLGNAL+DMY +CG EAR +F R+P
Sbjct: 332 ASTGCSSL---RFGRMIHGCALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC- 386
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N VS +M++G +Q G+ + A+ LF+ ++
Sbjct: 387 NAVSWNTMIAG-------------------------------SSQKGQMKRAVELFQRMQ 415
Query: 378 RESVCPTHYTFGNLLNACANLAD----LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
E + P T+ NLL A A+ + + GR+ H+ +V G S+ +G +++
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS------CGYASEPAIGTAVV 469
Query: 434 DMYMKCGSVEDGCRIFE--TMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
MY CG++++ F+ M +R D VSWNA+I +Q+G+G ALG F++M L G P
Sbjct: 470 KMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAP 529
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ +T + VL AC+ A + EG + + G+ T + + GR G L+ A+ +
Sbjct: 530 NQITCVAVLDACAGAAALTEGEIVHDHL-RHSGMESNLFVATALASMYGRCGSLESAREI 588
Query: 551 IEAMPMQPDAVIWGSLLAA 569
E + ++ D VI+ +++AA
Sbjct: 589 FEKVAVERDVVIFNAMIAA 607
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 186/402 (46%), Gaps = 50/402 (12%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
G ++HA + + +G+ L+ +Y KC + VF + R+ SW ++IT
Sbjct: 45 LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y ++G A A+ +F RM G+ D VT +V+ ACA L +G IHA ++ L+
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVE-SGLKG 161
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
VL N L+ +Y CG V SA L+F KM
Sbjct: 162 KSVLANLLLHIYGSCG-------------------------------CVASAMLLFEKM- 189
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
ER++VSWNA IA Q+G+ AL LF+ ++ E V P T L CA + RQ
Sbjct: 190 ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATI------RQ 243
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
A H + SG E + V +L Y + G + +F+ ERD VSWNAM+
Sbjct: 244 AQA---IHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
AQ+G+ +EA LF +ML G P VT++ CS + GR + E GL
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS---LRFGR-MIHGCALEKGLDR 356
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++D+ R G +EA+ L + +P +AV W +++A
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFKRIPC--NAVSWNTMIA 396
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 35/247 (14%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK--MSNK-NVFTW 88
++++++ R++H+RI+ +ASE I ++ +YA CG + A F + M ++ +V +W
Sbjct: 440 ARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSW 499
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N+II+ L +QH ALG+F +M A
Sbjct: 500 NAIISSL-------------------------------SQHGHGKRALGFFRRMDLHGVA 528
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
++ + + L ACAG+ G VH L S S++++ +AL MYG+CG + AR +
Sbjct: 529 PNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREI 588
Query: 209 FDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
F+ + ER++V +N++I Y QNG A +AL++F RM G PDE + SV+SAC+
Sbjct: 589 FEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGL 648
Query: 268 FKEGLQI 274
EG +I
Sbjct: 649 ADEGWEI 655
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 38/205 (18%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS-NK 83
+LD+C + ++++ VH + S S +F+ L +Y +CG L AR++F+K++ +
Sbjct: 537 VLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V +N+ M++ ++Q+ EAL F +M
Sbjct: 597 DVVIFNA-------------------------------MIAAYSQNGLAGEALKLFWRMQ 625
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSALIDMYGKCG 200
E E SF S LSAC+ G ++ + +S S D Y + +D+ G+ G
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY--ACAVDVLGRAG 683
Query: 201 RVSCARRVFDGMRER-NIVSWNSLI 224
++ A + M + ++ W +L+
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLL 708
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/661 (33%), Positives = 353/661 (53%), Gaps = 74/661 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + R +HA +++F+ LID+Y +C
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCA------------- 148
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++G A+ +FA MP RD +WN+M++G+A H + A+ + +
Sbjct: 149 ---------------RFG---PAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLD 190
Query: 142 MHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD---VYMGSALIDMYG 197
M + + S L A GT VHA ++ + V +G+AL+DMY
Sbjct: 191 MQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYA 250
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLA 256
KC + A RVF GM RN V+W++LI + ++A +F M+ G+ ++A
Sbjct: 251 KCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVA 310
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S + CASLA + G Q+HA L + + DL GN+L+ MYA
Sbjct: 311 SALRVCASLADLRMGTQLHALLAK-SGIHADLTAGNSLLSMYA----------------- 352
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
KA + A ++F ++ ++ +S+ AL++GY QNG+ EEA +F+ +
Sbjct: 353 --------------KAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ +V P T +L+ AC++LA LQ GR +H V+ GL + + NSLIDMY
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLAL------ETSICNSLIDMY 452
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG ++ ++F+ M RD VSWN MI G +G G EA LF M G +PD VT I
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
++ ACSH+GLV EG+ +F +M+ ++G+ P +HY CMVDLL R G LDEA I++MP+
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPL 572
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D +WG+LL AC++H+NI LG+ V++ + ++ P +G +VLLSN+++ GR+ E V
Sbjct: 573 KADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 632
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R + + +G K PGCSWIEI G ++ F+ D+ HP + +IY L + ++K++GY +
Sbjct: 633 RIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADT 692
Query: 677 S 677
S
Sbjct: 693 S 693
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 175/371 (47%), Gaps = 39/371 (10%)
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G+++ AR+VFD + + ++N+LI Y GP A++++ M+ + P++ T V+
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC++LA G IHA L DL + AL+D+Y +C + A VF +MP+R+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAV-GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG-LFRLLKR 378
V+ +M++GYA +G A+ L + R
Sbjct: 166 VAWNAMLAGYA-------------------------------NHGMYHHAIAHLLDMQDR 194
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T +LL A L G H + ++ +L E + +G +L+DMY K
Sbjct: 195 GGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR---AYLDQNEEQVLIGTALLDMYAK 251
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG- 497
C + CR+F M R+ V+W+A+I G TEA LFK ML+ G T +
Sbjct: 252 CKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVAS 311
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L C+ + G + + ++K A L + ++ + +AG ++EA L + + ++
Sbjct: 312 ALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS-LLSMYAKAGLINEATMLFDEIAIK 370
Query: 558 PDAVIWGSLLA 568
D + +G+LL+
Sbjct: 371 -DTISYGALLS 380
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 37/311 (11%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLIDVYAK 66
+V + FL ++ A L C S++D R ++HA + KS +++ N L+ +YAK
Sbjct: 297 LVEGMCFLSATSVASALRVC---ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAK 353
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G + A +FD+++ K+ ++ +++ SG+
Sbjct: 354 AGLINEATMLFDEIAIKDTISYGALL-------------------------------SGY 382
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
Q+ + EA F KM + N + S + AC+ + G H + + +
Sbjct: 383 VQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALET 442
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ ++LIDMY KCGR+ +R+VFD M R+IVSWN++I Y +G +A +F+ M
Sbjct: 443 SICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQ 502
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G EPD+VT +++AC+ EG + + + +VD+ A+ G L+E
Sbjct: 503 GFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDE 562
Query: 307 ARCVFDRMPIR 317
A MP++
Sbjct: 563 AYQFIQSMPLK 573
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
++ ++ G + ++F+ + D ++NA+I + G A+ L++ ML P+
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
T VL ACS + GR + + GL T ++DL R A +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAV-GLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 553 AMPMQPDAVIWGSLLAACKVH 573
MPM+ D V W ++LA H
Sbjct: 159 KMPMR-DVVAWNAMLAGYANH 178
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/527 (39%), Positives = 309/527 (58%), Gaps = 10/527 (1%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F L CA ++H+ + K+ + + + L+D+YGKCG + A ++FD M
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGL 272
R+ VSW S++T + + L + M G++PD A +V AC+SL + G
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HAR M +D V+ ++L+DMY KCG+ ++AR VFD + +N VS TSM+SGYA++
Sbjct: 126 QVHARFM-LSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARS 184
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNL 391
A +F + RN+ SW ALI+G Q+G + LF ++RE + ++
Sbjct: 185 GRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSV 244
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ CANLA L+LG+Q H GL G ES +F+ N+L+DMY KC + IF
Sbjct: 245 VGGCANLALLELGKQIH------GLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYR 298
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M +D +SW ++IVG AQ+G EAL L+ +M+L KP+ VT +G+L ACSHAGLV G
Sbjct: 299 MPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRG 358
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
R+ F SM+ ++ + P HYTC++DLL R+G LDEA+ L++ +P +PD W SLL+AC
Sbjct: 359 RELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACM 418
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
H N+ +G +A ++L+++P + Y+LLSN+YA WG V +VRKLM V K+PG
Sbjct: 419 RHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGY 478
Query: 632 SWIEILGHVNVFMVKDK-RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
S I+ VF + HP+ EI +LK L EM++ GYVPN S
Sbjct: 479 SSIDFGKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTS 525
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 242/554 (43%), Gaps = 116/554 (20%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ S F L C R +S S +H++IIK+ F + N L+DVY KCG + A ++
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M N++ +W SI+T K A +P R N+M + HD
Sbjct: 61 FDEMPNRDHVSWASILTAHNK-----------ALIPRRTLSMLNTMFT----HDGLQP-- 103
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ F + AC+ ++G QVHA S + D + S+LIDMY
Sbjct: 104 -------------DHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMY 150
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR-------------- 242
KCG+ AR VFD + +N VSW S+I+ Y ++G +A+++F++
Sbjct: 151 TKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLFSWTALIS 210
Query: 243 -----------------MMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
M GI+ D + L+SVV CA+LA + G QIH L+
Sbjct: 211 GLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHG-LVIALGF 269
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ L + NALVDMYAKC + A+ +F RMP ++V+S TS++ G A
Sbjct: 270 ESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTA-------------- 315
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
Q+G+ EEAL L+ + + P TF LL AC
Sbjct: 316 -----------------QHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYAC--------- 349
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDW 457
+H +V G +D + S L+D+ + G +++ + + + + D
Sbjct: 350 --SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDE 407
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPD-HVTMIGVLCACSHAGLVEEGRKYF 515
+W +++ C ++ + + ++L L E P ++ + V G V + RK
Sbjct: 408 PTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLM 467
Query: 516 SSMS--KEHGLAPL 527
SSM KE G + +
Sbjct: 468 SSMEVRKEPGYSSI 481
>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/680 (33%), Positives = 356/680 (52%), Gaps = 107/680 (15%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N L+ +K G + AR++FDKM ++ FTWN++I + DA +LF S P ++
Sbjct: 33 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLADAEQLFRSNPVKNTI 92
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+++SG+ + EA F +M S+ +EY+ GS L C + G Q+H
Sbjct: 93 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHT 152
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDA 236
K+ + DV + + L+ MY +C R+S A +FD M E+N V+W S++T Y QNG A A
Sbjct: 153 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFKA 212
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+E F + G + ++ T SV++ACAS++A + G+Q+H +++ + ++ + +AL+D
Sbjct: 213 IECFRDLRRDGNQSNQYTFPSVLTACASVSACRVGVQVHGCIVK-SGFKTNIYVQSALID 271
Query: 297 MYAKCGKLNEAR--------------------CV-----------FDRMPIRNV----VS 321
MYAKC L AR CV F RM R++ +
Sbjct: 272 MYAKCRDLESARALLEGMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFT 331
Query: 322 ETSMVSGYAKASS------------------------VKSARLMFTKMLERNVVSWNALI 357
S+++ +A + + + SA +F M+E++V+SW AL+
Sbjct: 332 IPSILNCFASSRTEMKIASSAHCLIVKPGMRLTSLGIMDSALKVFEGMIEKDVISWTALV 391
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G T NG EEAL LF ++ + P ++L+A A L L+ G+Q H + +K
Sbjct: 392 TGNTHNGFYEEALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIK---- 447
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
SG S + V NSL+ MY KCGS+ED IF +M RD ++W +IVG
Sbjct: 448 --SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCIIVG----------- 494
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
L+EE ++YF SM +G+ P +HY CM+DL
Sbjct: 495 -----------------------------LIEEAQRYFDSMRTVYGITPGPEHYACMIDL 525
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
GR+G +A+ L+ M ++PDA +W ++LAA + H NI GE AK L+++EP+N+ PY
Sbjct: 526 FGRSGDFVKAEELLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMKLEPNNAVPY 585
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSNMY+ GR E VR+LM+ R + K+PGCSW+E G V+ FM +D+RHP EIY
Sbjct: 586 VLLSNMYSAAGRQDEAANVRRLMKSRNINKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIY 645
Query: 658 LVLKMLTREMKRVGYVPNAS 677
+ + +K GY+ + S
Sbjct: 646 SKVDEMMLLIKEAGYLADMS 665
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 49/310 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + +VH I+KS F + I++Q+ LID+YAKC L AR + + M
Sbjct: 231 FPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALIDMYAKCRDLESARALLEGME 290
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G ++ G I++A +F M ERD
Sbjct: 291 VDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERD-------------------------- 324
Query: 142 MHSENFALSEYSFGSALSACAGS-VDFKMGTQVHALLSKS--RYSSDVYMGSALIDMYGK 198
+ +++ S L+ A S + K+ + H L+ K R +S M SAL
Sbjct: 325 -----MKIDDFTIPSILNCFASSRTEMKIASSAHCLIVKPGMRLTSLGIMDSAL------ 373
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
+VF+GM E++++SW +L+T NG +AL++F M GI PD++ ASV
Sbjct: 374 --------KVFEGMIEKDVISWTALVTGNTHNGFYEEALKLFCNMRVGGIYPDQIVTASV 425
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SA A L + G Q+H ++ + L + N+LV MY KCG L +A +F+ M IR+
Sbjct: 426 LSASAELTLLEFGQQVHGNYIK-SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 484
Query: 319 VVSETSMVSG 328
+++ T ++ G
Sbjct: 485 LITWTCIIVG 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
++VH IKS F S + + N L+ +Y KCG L A +F+ M +++ TW II GL
Sbjct: 439 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCIIVGL--- 495
Query: 99 GFIDDASRLFASM---------PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
I++A R F SM PE C M+ F + F +A +M E A
Sbjct: 496 --IEEAQRYFDSMRTVYGITPGPEHYAC----MIDLFGRSGDFVKAEELLHQMEVEPDAT 549
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV-YMGSALIDMYGKCGRVSCARRV 208
+ + L+A + + G + L K ++ V Y+ L +MY GR A V
Sbjct: 550 ---VWKAILAASRKHGNIENGERAAKTLMKLEPNNAVPYV--LLSNMYSAAGRQDEAANV 604
Query: 209 FDGMRERNI 217
M+ RNI
Sbjct: 605 RRLMKSRNI 613
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 330/596 (55%), Gaps = 32/596 (5%)
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
L+K G + DA LF MP ++ +W S++SG ++ R AL F M A ++++
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+AL ACA + G QVH+L ++ ++ D ++GS LI+MY +CG + A+ VFD M
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++V + SLI+ + +NG A E ++M+ G++P+E T+ ++++AC + G QI
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQI 233
Query: 275 HARLMRCEKLRNDLVLGN-ALVDMYAK-----------------CGKLNEAR----CVFD 312
H L++ LR+ V + AL+D Y++ CG + R
Sbjct: 234 HGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIK 293
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
I ++ +++S Y + V+ M K+ ++VSW I+ QNG E+A+ L
Sbjct: 294 HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 353
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ E P Y F ++L++CA++A L G Q H +K G +S+I GN+L
Sbjct: 354 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC------DSEICTGNAL 407
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
I+MY KCG + F+ M D SWN++I G AQ+G +AL +F KM G KPD
Sbjct: 408 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 467
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
T +GVL C+H+G+VEEG +F M ++ P HY CM+D+LGR G DEA +I
Sbjct: 468 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIN 527
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP +PDA+IW +LLA+CK+HRN+ +G+ A +L+E+ +S YVL+SN+YA G W +
Sbjct: 528 DMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWED 587
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+VR+ M + GV K GCSWIEI V+ F +D HP + IY +L L M+
Sbjct: 588 ARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 643
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 194/379 (51%), Gaps = 37/379 (9%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
+VH+ +++ FA + +I + LI++Y++CG L A++VFD+M + +V + S+I+ + G
Sbjct: 135 QVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNG 194
Query: 100 FIDDASRLFASMPERD-QCSWNSMVSGFAQHDRF--SEALGYFVKM-------------- 142
+ A+ M ++ + + ++M + R + GY +K
Sbjct: 195 EFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTAL 254
Query: 143 -----HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+E +E++ L AC GS+ +G Q+H K +D+ + +AL+ MYG
Sbjct: 255 IDFYSRNEGVDPNEFALSIVLGAC-GSI--GLGRQLHCSAIKHDLITDIRVSNALLSMYG 311
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G V + + + ++VSW + I+ QNG A+ + +M + G P+ +S
Sbjct: 312 RTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSS 371
Query: 258 VVSACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+S+CA +A+ +G+Q H ++ C+ +++ GNAL++MY+KCG++ AR FD M
Sbjct: 372 VLSSCADVASLDQGMQFHCLALKLGCD---SEICTGNALINMYSKCGQMGSARLAFDVMH 428
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALG 371
+V S S++ G+A+ A +F+KM ++ + ++ ++ G +G EE
Sbjct: 429 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGEL 488
Query: 372 LFRLLKRE---SVCPTHYT 387
FRL+ + + P+HY
Sbjct: 489 FFRLMIDQYSFTPAPSHYA 507
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 204/436 (46%), Gaps = 55/436 (12%)
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
S DV + ++ K GR++ A +FD M +N+V+W S+++ +NG AL +F
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFAD 104
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ SG+ P++ + + ACA L A + G Q+H+ +R D +G+ L++MY++CG
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVR-AGFAGDAWIGSCLIEMYSRCG 163
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----------NVVS 352
L A+ VFDRM +VV TS++S + + + A +ML++ +++
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223
Query: 353 WNALIAGYTQNGENEEALGLFR------------LLKRESVCPTHYTFGNLLNACANLAD 400
+ G +G + +GL + E V P + +L AC ++
Sbjct: 224 ACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIG- 282
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
LGRQ H +KH L +DI V N+L+ MY + G VE+ + + D VSW
Sbjct: 283 --LGRQLHCSAIKHDLI------TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSW 334
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
I QNG+G +A+ L +M G P+ VL +C+ +++G ++
Sbjct: 335 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF------ 388
Query: 521 EHGLAPLK---DHYTC----MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H LA LK D C ++++ + G + A+ + M D W SL +H
Sbjct: 389 -HCLA-LKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSL-----IH 440
Query: 574 RNIMLGEYVAKKLLEI 589
+ G+ A K LE+
Sbjct: 441 GHAQHGD--ANKALEV 454
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 37/353 (10%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
S+ R++H IK ++I + N L+ +Y + G + + +K+ N ++ +W + I+
Sbjct: 280 SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAIS 339
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
+ GF + +A+ +MHSE F + Y+
Sbjct: 340 ANFQNGFGE-------------------------------KAIALLCQMHSEGFTPNGYA 368
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F S LS+CA G Q H L K S++ G+ALI+MY KCG++ AR FD M
Sbjct: 369 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 428
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
++ SWNSLI + Q+G A+ ALEVF +M ++GI+PD+ T V+ C +EG +
Sbjct: 429 THDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-E 487
Query: 274 IHARLMRCEKLRNDLVLGNA-LVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAK 331
+ RLM + A ++DM + G+ +EA + + MP + + ++++
Sbjct: 488 LFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKL 547
Query: 332 ASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++ +L +++E R+ S+ + Y +GE E+A + R + V
Sbjct: 548 HRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGV 600
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L SC S+ + H +K SEI N LI++Y+KCG + AR FD M
Sbjct: 369 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 428
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G AQH ++AL F K
Sbjct: 429 THDVTSWNSLI-------------------------------HGHAQHGDANKALEVFSK 457
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL-SKSRYSSDVYMGSALIDMYGKCG 200
M S + +F L C S + G L+ + ++ + +IDM G+ G
Sbjct: 458 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 517
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLIT 225
R A R+ + M E + + W +L+
Sbjct: 518 RFDEALRMINDMPFEPDALIWKTLLA 543
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
E D+ + ++ +K G + D +F+ M ++ V+W +++ GC +NG AL +F
Sbjct: 43 AESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMF 102
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
M+ G P+ L AC+ G + G + S++ G A +C++++ R
Sbjct: 103 ADMVESGVAPNDFACNAALVACADLGALRAGEQ-VHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G L AK + + M PD V + SL++A
Sbjct: 162 CGSLPAAKEVFDRMD-SPDVVGYTSLISA 189
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 345/659 (52%), Gaps = 74/659 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL + R S+ ++HA ++K F S+ + N LID+YAKCG L+ A +VFD
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD--- 63
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
MPER+ SW +++ GF H E L F +
Sbjct: 64 ----------------------------GMPERNVVSWTALMVGFLHHGEARECLRLFGE 95
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++ + L AC G + G Q+H + ++ + + ++L+ MY K
Sbjct: 96 MRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRW 153
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVS 260
ARRVFD + RN+ +WNS+I+ Y G D+L VF M E PDE T AS++
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLK 213
Query: 261 ACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC+ L A +EG Q+HA + +R ++ +L AL+D+Y KC R+P+
Sbjct: 214 ACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC----------HRLPV--- 260
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
A +F + RN + W +I G+ Q G+ +EA+ LFR
Sbjct: 261 ------------------AMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS 302
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V + +++ A+ A ++ G+Q H + K + D+ V NSL+DMY+KC
Sbjct: 303 GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAK------TPAGLDVSVANSLVDMYLKC 356
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + R F M R+ VSW AMI G ++G+G EA+ LF++M G + D V + +L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 416
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLV+E R+YFS + ++ + P +HY CMVDLLGRAG L EAK LI +MPM+P
Sbjct: 417 SACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+W +LL+AC+VH+++ +G V LL ++ N YV+LSN+ AE G W E +R
Sbjct: 477 VGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGA 536
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFM-VKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNA 676
MR++G+ KQ GCSW E+ V+ F D HP +I L+ + M+ R+GY +A
Sbjct: 537 MRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDA 595
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 186/373 (49%), Gaps = 41/373 (10%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLI 61
R ++ G++ +SP L + L++ TR ++H +++ F + N L+
Sbjct: 87 RECLRLFGEMRGSGTSPNEFTLSATLKACG-GGTRAGVQIHGVCVRTGFEGHDVVANSLV 145
Query: 62 DVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
+Y+K AR+VFD + ++N+ TWNS+I+G G D+ +F M R
Sbjct: 146 VMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRR------- 198
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
HD + E++F S L AC+G + G QVHA ++
Sbjct: 199 -------HDEQPD----------------EFTFASLLKACSGLGAAREGAQVHAAMAVRG 235
Query: 182 YS--SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
S S+ + AL+D+Y KC R+ A +VFDG+ RN + W ++I + Q G +A+ +
Sbjct: 236 VSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCL 295
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F R +SG+ D L+SVV+ A A ++G Q+H + D+ + N+LVDMY
Sbjct: 296 FRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA-GLDVSVANSLVDMYL 354
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNA 355
KCG EA F MP RNVVS T+M++G K + A +F +M +E + V++ A
Sbjct: 355 KCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLA 414
Query: 356 LIAGYTQNGENEE 368
L++ + +G +E
Sbjct: 415 LLSACSHSGLVDE 427
>gi|357518009|ref|XP_003629293.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523315|gb|AET03769.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 672
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/676 (32%), Positives = 352/676 (52%), Gaps = 85/676 (12%)
Query: 33 KSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS- 90
+++ + R++H ++K+ S + NRL+ +Y++ G L+ A K+FD+M N F+WN+
Sbjct: 8 RTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTL 67
Query: 91 ------------------------------IITGLLKWGFIDDASRLFASMPERDQCSWN 120
I++ L K G + A LF +MP ++ WN
Sbjct: 68 IEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWN 127
Query: 121 SMVSGFAQHDRFSEALGYFVKM--------HSENFALSEYSFGSALSACAGSVDFKMGTQ 172
SM+ G+++H +L F +M H + F LS + ACA G Q
Sbjct: 128 SMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLS-----TVFGACADLFALDCGKQ 182
Query: 173 VHA--LLSKSRYSSDVYMGSALIDMYGKCG------------------------------ 200
VHA + + D + S++++ YGKCG
Sbjct: 183 VHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANA 242
Query: 201 -RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
R+S AR+VFD + V WNS+I+ Y NG +AL +F +M +G+ D +A+++
Sbjct: 243 GRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANIL 302
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
S +SL + Q+H + +D+V+ + L+D Y+KC +++ +F + + +
Sbjct: 303 SISSSLLNVELVKQMHDHAFKIGA-THDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDA 361
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ +M++ Y V+ A+ +F M + ++SWN+++ G TQN EAL F ++ +
Sbjct: 362 ILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKL 421
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V ++F ++++ACA + L+LG Q + GL ESD + SL+D Y KC
Sbjct: 422 DVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGL------ESDQIICTSLVDFYCKC 475
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G VE G ++F+ M++ D VSWN M++G A NGYG EAL LF +M G +P +T G+L
Sbjct: 476 GLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGIL 535
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC H GLVEEGR F +M ++ + P +HY+CMVDL R GC EA LIE MP Q D
Sbjct: 536 SACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQAD 595
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +W S+L C H N +G+ A+K+++++P NSG Y+ LSN+ A W VR+L
Sbjct: 596 ANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVREL 655
Query: 620 MRKRGVVKQPGCSWIE 635
MR + V K PGCSW++
Sbjct: 656 MRNKNVQKIPGCSWMD 671
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 152/300 (50%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S A +L +V +++H K +I + + L+D Y+KC + + K+F
Sbjct: 294 DFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLF 353
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + N++IT G ++DA +F SMP + SWNS++ G Q+ SEAL
Sbjct: 354 HELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALD 413
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M+ + + ++SF S +SACA ++G Q+ SD + ++L+D Y
Sbjct: 414 TFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYC 473
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V R+VFDGM + + VSWN+++ Y NG +AL +F M SG+ P +T
Sbjct: 474 KCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTG 533
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC +EG + + + + + +VD++A+ G EA + + MP +
Sbjct: 534 ILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQ 593
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 219/493 (44%), Gaps = 75/493 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKS--QFASEIFIQNRLIDVYAKCGCLYGARK 75
D+ + + +C ++ ++VHAR+ +F + + + +++ Y KCG L A +
Sbjct: 160 DAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAAR 219
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS--WNSMVSGFAQHDRFS 133
V + + F+ +++++G G + DA ++F + + D CS WNS++SG+ +
Sbjct: 220 VVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDN--KVDPCSVLWNSIISGYVSNGEEM 277
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EAL F KM + + LS + ++ ++ Q+H K + D+ + S L+
Sbjct: 278 EALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLL 337
Query: 194 DMYGK-------------------------------CGRVSCARRVFDGMRERNIVSWNS 222
D Y K CGRV A+ VF+ M + ++SWNS
Sbjct: 338 DAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNS 397
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
++ QN S+AL+ F M ++ D+ + ASV+SACA ++ + G Q+ + +
Sbjct: 398 ILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITL- 456
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L +D ++ +LVD Y KCG + R VFD M + VS +M+ GYA
Sbjct: 457 GLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYAT----------- 505
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
NG EAL LF + V P+ TF +L+AC + ++
Sbjct: 506 --------------------NGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVE 545
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWN 461
GR +KH G E + ++D++ + G + + E M + D W
Sbjct: 546 EGRDLF-RTMKHDYDINPGIEH----YSCMVDLFARVGCFGEAMYLIEEMPFQADANMWL 600
Query: 462 AMIVGCAQNGYGT 474
+++ GC +G T
Sbjct: 601 SVLRGCVSHGNKT 613
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D FA ++ +C S+ ++ + I S+ I L+D Y KCG + RKV
Sbjct: 425 MDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKV 484
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
FD M + +WN+++ G G+ +A LF M
Sbjct: 485 FDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEM 519
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/752 (31%), Positives = 374/752 (49%), Gaps = 114/752 (15%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQN 58
+ T SVK D + L P LL C+ ++ + + VH ++KS+F++ + + N
Sbjct: 51 IKTPNSVKVDKTD-SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLN 109
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
+ Y+KC ID A RLF M +R+ S
Sbjct: 110 HVAHAYSKCSD-------------------------------IDAACRLFDQMSQRNTFS 138
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
W +++G A++ F + +F +M S+ ++++ L C G ++G VHA +
Sbjct: 139 WTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIV 198
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
++S ++ +AL++MY K + + +VF+ M E N+VSWN++IT + N DA +
Sbjct: 199 IRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F+RMM G+ PD T V A L + ++ + N LV G AL+DM
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV-GTALIDMN 317
Query: 299 AKCGKLNEARCVFDRMPI--RNVVSETSMVSGYAKASSVKSARLMFTKM----------- 345
+KCG L EAR +F+ I R +M+SGY ++ + A +F KM
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 346 ----------------------------LERNVVSW-NALIAGYTQNGENEEALGLF-RL 375
LE N VS NA+ Y + G E+ +F R+
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 376 LKRESVCPT------------------------------HYTFGNLLNACANLADLQLGR 405
R+ + T +TF ++L +CANL L+ G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H + K GL + D + ++L+DMY KCG + D ++F + D VSW A+I
Sbjct: 498 QVHGIICKVGL------DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G AQ+G +AL LF++M+ G +P+ VT + VL ACSH GLVEEG +YF M K +GL
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY C+VDLL R G L++A I MP++P+ ++W +LL AC+VH N+ LGE A+K
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+L + NS YVLLSN Y E G + + + +R LM+++GV K+PGCSWI + G ++ F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D++HP +IY L+ L ++ + VP+ S
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLISLDDVPDLS 763
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 349/640 (54%), Gaps = 63/640 (9%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNK----NVFTWNSIITGLLKWGFIDDASRLFASM 111
++++ I + CG ++ ++ N + S IT + G I A R+F
Sbjct: 21 VEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKT 80
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
+ + +WN+M G+AQ + + + F +MH + + ++F + +CA + K G
Sbjct: 81 AQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGE 140
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRV--SCARRVFDGMRERNIVSWNSLITCYEQ 229
+VH +++K + S+ ++G ALI MY G V + A +VF MR++N+ +W +++ +
Sbjct: 141 EVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAH-- 198
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
AC + + AR + + D+V
Sbjct: 199 ------------------------------VACRDM--------VSARRLFDLAPQRDVV 220
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N +V Y + G + AR +FDRMP R+V+S +++SGYA V+S +F +M RN
Sbjct: 221 LWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMPVRN 280
Query: 350 VVSWNALIAGYTQNGENEEALGLFR----LLKRES-------VCPTHYTFGNLLNACANL 398
V SWN LI GY +NG +EAL F+ L++ E V P YT +L AC+ L
Sbjct: 281 VYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRL 340
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
DL++G+ H + G + ++FVGN+LIDMY KCG +E +F+ + +D +
Sbjct: 341 GDLEMGKWVHVYAESIGYK------GNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDII 394
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
+WN +I G A +G+ +AL LF++M GE+PD VT +G+L AC+H GLV G +F SM
Sbjct: 395 TWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSM 454
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
++ + P +HY CMVDLLGRAG +D+A ++ MPM+PDAVIW +LL AC++++N+ +
Sbjct: 455 VDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEM 514
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
E ++L+E+EP+N G +V++SN+Y +LGR +V R++ MR G K PGCS I
Sbjct: 515 AELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCND 574
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+ F D+RHP IY L+ LT ++ GYVPN D
Sbjct: 575 SMVEFYSLDERHPETDSIYRALQGLTILLRSHGYVPNLVD 614
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 166/307 (54%), Gaps = 12/307 (3%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
++ + N ++ Y + G + AR++FD+M +++V +WN++++G G ++ +LF MP
Sbjct: 218 DVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEEMP 277
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKM----------HSENFAL-SEYSFGSALSAC 161
R+ SWN ++ G+ ++ F EAL F +M S+ + ++Y+ + L+AC
Sbjct: 278 VRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTAC 337
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
+ D +MG VH Y ++++G+ALIDMY KCG + A VFDG+ ++I++WN
Sbjct: 338 SRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWN 397
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
++I +G +DAL +F RM +G PD VT ++SAC + + GL ++
Sbjct: 398 TIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMVDD 457
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARL 340
+ + +VD+ + G +++A + +MP+ + V +++ +V+ A L
Sbjct: 458 YSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMAEL 517
Query: 341 MFTKMLE 347
+++E
Sbjct: 518 ALQRLIE 524
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C R + + VH + +F+ N LID+YAKCG + A VFD + K+
Sbjct: 333 VLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKD 392
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASM 111
+ TWN+II GL G + DA LF M
Sbjct: 393 IITWNTIINGLAMHGHVADALSLFERM 419
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/655 (35%), Positives = 366/655 (55%), Gaps = 76/655 (11%)
Query: 41 VHARIIKSQFA------------------SEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+H I+ SQF+ S + N LI K G + AR+VF++M +
Sbjct: 35 LHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +W ++ITG +K G I++A LF ++ +W ++VSG+ + +R EA F
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDA 154
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +N V + +I+ Y + G
Sbjct: 155 MPVKN---------------------------------------VISWNTMIEGYARKGW 175
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +F+ M ERN+VSWN++IT + Q +A E+F RM E D ++ ++V+
Sbjct: 176 IDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAG 231
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ K G ARL+ + ++V N ++ YA+ +L+EA +F++MP R + S
Sbjct: 232 LS-----KNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSS 286
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR-ES 380
+M++G+ + ++ A F KM +NVV+W A+I+G+ Q+G +EEAL +F ++ +
Sbjct: 287 WNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANN 346
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P TF ++L AC+ LA L G+Q H + K + E +D+ ++LI+MY KCG
Sbjct: 347 VKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT----VYQEVADVV--SALINMYSKCG 400
Query: 441 SVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+E +IF+ ++ RD VSWN MI A +G+G +A+ LF +M G +PD+VT I +
Sbjct: 401 ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIAL 460
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSHAGLV+EG K F ++ ++ + +DH+TC+VDL GRAG L EA I+ + ++P
Sbjct: 461 LSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKP 520
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
A +W +LLA C VH +I LG+ A+KLLE EP N+G Y++LSN+YA G+W E VR
Sbjct: 521 SASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRM 580
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
M+ +G+ KQPGCSWIE+ V+VF+V D H + IYL+L L +MK++G+
Sbjct: 581 KMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHT 635
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ F +L +C + ++ + +++H I K+ + + + LI++Y+KCG L ARK+F
Sbjct: 350 NEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIF 409
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S+ RD SWN M++ +A H +A+
Sbjct: 410 DD-----------------------------GSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSR---YSSDVYMGSAL 192
F +M + F ++ + LSAC AG VD G ++ L + R D + + L
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVD--EGLKLFENLVRDRSIKLREDHF--TCL 496
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVS-WNSLI 224
+D++G+ GR+ A G+ + S W +L+
Sbjct: 497 VDLFGRAGRLQEAFDFIKGLEVKPSASVWAALL 529
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/657 (33%), Positives = 345/657 (52%), Gaps = 79/657 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F + L + + + VHA+IIK +++++ +LI ++ C + A VF+++
Sbjct: 23 FEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQ 82
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NV +N++I Q+ + +A F
Sbjct: 83 DPNVHLYNTLI-------------------------------RAHVQNSQSLKAFATFFD 111
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +++ L AC G +H + K + D+++ ++LID Y KCG
Sbjct: 112 MQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGL 171
Query: 202 --VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
V+ A ++F M E+++VSWNS+I + G A ++F DE+
Sbjct: 172 LGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLF----------DEMA----- 216
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
D V N ++D Y K G++++A +F++MP RNV
Sbjct: 217 -------------------------ERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNV 251
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS ++MVSGY K ++ AR++F KM +N+V+W +I+G+ + G +EA L+ ++
Sbjct: 252 VSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAA 311
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P T ++L ACA L LG++ H + K ++ + V N+L+DMY KC
Sbjct: 312 GLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIK------CSVNVSNALVDMYAKC 365
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G V+ IF M RD VSWN M+ G A +G+G +A+ LF KM G KPD VT+I +L
Sbjct: 366 GRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAIL 425
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CAC+HAG V++G YF+SM ++HG+ P +HY CM+DLLGR G L+EA L+++MPM+P+
Sbjct: 426 CACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPN 485
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
VIWG+LL AC+VH + L E V +L+ +E S+ G Y +LSN++A G W V +R
Sbjct: 486 DVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQ 545
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
M+ GV K G S IE+ V+ F V DK HP +IY +L L +++K+V Y P A
Sbjct: 546 MKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVAYAPEA 602
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 216/461 (46%), Gaps = 91/461 (19%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL--YGA 73
F D+ + LL +C + + +H + K F ++F+ N LID Y+KCG L A
Sbjct: 118 FADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYA 177
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
K+F +M K++ +WNS+I GL+K G + A +LF M ERD SWN+++ G+ + S
Sbjct: 178 MKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMS 237
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A F KM N V S ++
Sbjct: 238 QAFNLFEKMPERN---------------------------------------VVSWSTMV 258
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G + AR +FD M +N+V+W +I+ + + G A +A ++ +M A+G++PD+
Sbjct: 259 SGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDG 318
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL S+++ACA G ++HA + + +++ + + NALVDMYAKCG++++A +F+
Sbjct: 319 TLISILAACAESGLLVLGKKVHASIKKI-RIKCSVNVSNALVDMYAKCGRVDKALSIFNE 377
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M +R++VS WN ++ G +G E+A+ LF
Sbjct: 378 MSMRDLVS-------------------------------WNCMLQGLAMHGHGEKAIQLF 406
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD------IF 427
+++E P T +L AC H V GL + + E D I
Sbjct: 407 SKMQQEGFKPDKVTLIAILCAC-----------THAGFVDQGLSYFNSMERDHGIVPHIE 455
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ID+ + G +E+ R+ ++M +E + V W ++ C
Sbjct: 456 HYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGAC 496
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/673 (33%), Positives = 374/673 (55%), Gaps = 57/673 (8%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A LD + +A L +C R + + +VH +++KS + L+D Y+ C L AR
Sbjct: 108 AGLDEATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAAR 167
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQ--HDR 131
+FD + N W+ ++ L+++ + DA L MP RD +W +++SG+A+ ++
Sbjct: 168 TLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEY 227
Query: 132 FSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
++L FV++ +E+ + +E+++ S L AC + G +H L +S + S+ + S
Sbjct: 228 CCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITS 287
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
AL+D+Y + G V A V++G++ ++++ N+LI + G DA VF +M E
Sbjct: 288 ALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQM----TEH 343
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D + N ++ YA G+L + R +
Sbjct: 344 DSGSY------------------------------------NLMIKAYADEGRLEDCRRM 367
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML-ERNVVSWNALIAGYTQNGENEEA 369
F+ MP RN+V+ SM+S + ++ R +F ++ ERN V+WN++I+GY QN ++ EA
Sbjct: 368 FEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEA 427
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF ++ R S+ + TF LL+ACA + ++ G+ H + K ES+ +VG
Sbjct: 428 LKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPF------ESNGYVG 481
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+L+DMY KCG V D F ++ + SW ++I G AQNG+ EA+ F +ML K
Sbjct: 482 TALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVK 541
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+ +T +G+L A + AGLV +G ++F SM + +G+ P +HYTC VDLLGRA + EA+
Sbjct: 542 PNEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEK 600
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
I MP+ D V+WG+LL AC ++ +GE VA+KL + + YV +SN+YA+LG+
Sbjct: 601 FISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGK 660
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W +VV+VR +R K+PGCSWIE+ V+VF+V+D+ HP +EIYL+L+ L +
Sbjct: 661 WEDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDL---VSN 717
Query: 670 VGYVPNASDDEAY 682
+ Y + +DDE +
Sbjct: 718 ISY--SETDDETH 728
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 237/507 (46%), Gaps = 91/507 (17%)
Query: 101 IDDASR-LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
I A+R +F M R SWN+ V+ A+ R +ALG +MH L E ++ SAL
Sbjct: 61 IGSAARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALG 120
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR------ 213
ACA +MG QVH + KS +G++L+D Y C + AR +FD +
Sbjct: 121 ACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL 180
Query: 214 --------------------------ERNIVSWNSLITCYEQ--NGPASDALEVFVRMMA 245
R++ +W ++I+ Y + N +LE+FV+++A
Sbjct: 181 WSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLA 240
Query: 246 -SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G+ P+E T SV+ AC + A + G IH L++ ++ ++ +ALVD+Y + G +
Sbjct: 241 EDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQ-SGFESEQLITSALVDLYCRSGAV 299
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
++A V++ + + ++++ ++++G+ + A+L+F++M E + S+N +I Y G
Sbjct: 300 DDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEG 359
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
E+ +F ++ R N+ L
Sbjct: 360 RLEDCRRMFEMMPRR-----------------NMVTL----------------------- 379
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
NS++ + ++ G +E+G ++FE + ER+ V+WN+MI G QN +EAL LF M
Sbjct: 380 -----NSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVM 434
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH---YTCMVDLLGR 540
+ T +L AC+ G +E+G+ + + K P + + T +VD+ +
Sbjct: 435 CRLSIECSASTFPALLHACATIGTIEQGKMVHALLCK----TPFESNGYVGTALVDMYSK 490
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLL 567
GC+ +A+ + M P+ W SL+
Sbjct: 491 CGCVSDARAAFSCI-MSPNVASWTSLI 516
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 192/372 (51%), Gaps = 24/372 (6%)
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
S AR VFDGMR R +SWN+ + + + G DAL RM S DE T AS + AC
Sbjct: 63 SAARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGAC 122
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDL-VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + G Q+H ++++ +D V+G +L+D Y+ C L+ AR +FD + N +
Sbjct: 123 ARGRCLRMGWQVHCQVVKSGS--DDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL 180
Query: 322 ETSMVSGYAKASSVKSARLMFTKM-LERNVVSWNALIAGYTQNGENE---EALGLF-RLL 376
+ MV + + + A + +M R++ +W A+I+GY + G NE ++L LF +LL
Sbjct: 181 WSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYAR-GANEYCCKSLELFVQLL 239
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P +T+ ++L AC + L+ GR H +++ SG ES+ + ++L+D+Y
Sbjct: 240 AEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQ------SGFESEQLITSALVDLY 293
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+ G+V+D ++ + ++ N +I G G +A +F +M + D +
Sbjct: 294 CRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQM----TEHDSGSYN 349
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
++ A + G +E+ R+ F M + + + M+ +L + G L+E + L E +
Sbjct: 350 LMIKAYADEGRLEDCRRMFEMMPRRNMVT-----LNSMMSVLLQNGKLEEGRKLFEQIKD 404
Query: 557 QPDAVIWGSLLA 568
+ + V W S+++
Sbjct: 405 ERNTVTWNSMIS 416
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/728 (32%), Positives = 370/728 (50%), Gaps = 104/728 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S + + + C S R+VH + +K + + L+D+Y
Sbjct: 92 DESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMY------------- 138
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +NV +D R+F M ER+ SW S+++G++ + +
Sbjct: 139 --MKTENV----------------NDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWE 180
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E + Y+ + ++A +G QVHA++ K + + + ++LI +Y
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G + AR VFD M R+ V+WNS+I Y +NG + E+F +M +G++P +T AS
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFAS 300
Query: 258 VVSACASL-----------AAFKEGLQ--------IHARLMRCEKLRNDLVL------GN 292
V+ +CASL A K G + L +C+++ + L L G
Sbjct: 301 VIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGK 360
Query: 293 ALVD---MYAKC---GKLNEARCVFDRMPIRNV------------------VSE------ 322
+V M + C G ++A +F +M V VSE
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVI 420
Query: 323 -----------TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
T+++ Y K + A +F + +++++W+A++AGY Q GE EEA
Sbjct: 421 KTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAK 480
Query: 372 LFRLLKRESVCPTHYTFGNLLNACAN-LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF L +E + P +TF +++NACA+ A + G+Q H + +K L + + V +
Sbjct: 481 LFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLN------NALCVSS 534
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ MY K G+++ +F+ ERD VSWN+MI G +Q+G +AL +F +M
Sbjct: 535 ALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDV 594
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D VT IGV+ AC+HAGLVE+G+KYF+SM +H + P HY+CM+DL RAG L++A +
Sbjct: 595 DAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGI 654
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I MP P A +W +LL A +VHRN+ LGE A+KL+ ++P +S YVLLSNMYA G W
Sbjct: 655 INEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNW 714
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E VRKLM KR V K+PG SWIE+ F+ D HPL+ +IY L L+ +K
Sbjct: 715 QERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDA 774
Query: 671 GYVPNASD 678
GY P+ +
Sbjct: 775 GYQPDTKN 782
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 230/475 (48%), Gaps = 61/475 (12%)
Query: 104 ASRLFASMPERDQC--SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC 161
A LF +P R N ++ +++ + EAL FV + + E + + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
AGS+D K+G QVH K V +G++L+DMY K V+ RRVFD M ERN+VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
SL+ Y NG E+F +M G+ P+ T+++V++A + GLQ+HA +++
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK- 222
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ + N+L+ +Y++ G L +AR VFD+M IR+ V+ SM
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSM---------------- 266
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
IAGY +NG++ E +F ++ V PTH TF +++ +CA+L +L
Sbjct: 267 ---------------IAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSW 460
L + +K SG +D V +L+ KC ++D +F M E ++ VSW
Sbjct: 312 ALVKLMQCKALK------SGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSW 365
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC-------ACSHAGLVEEGRK 513
AMI GC QNG +A+ LF +M G KP+H T +L + HA +++ +
Sbjct: 366 TAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYE 425
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
SS+ T ++D + G +A + E + + D + W ++LA
Sbjct: 426 RSSSVG------------TALLDAYVKLGNTIDAVKVFEIIEAK-DLMAWSAMLA 467
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 348/665 (52%), Gaps = 72/665 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYG 72
++ L + LL + + + S+ R VHARI+K+ F+ N LI++Y+K
Sbjct: 1 MSLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPES 60
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR V RL P R+ SW S++SG AQ+ F
Sbjct: 61 ARLVL----------------------------RL---TPARNVVSWTSLISGLAQNGHF 89
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
S AL F +M E ++++F A A A G Q+HAL K DV++G +
Sbjct: 90 STALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSA 149
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
DMY K AR++FD + ERN+ +WN+ I+ +G +A+E F+ P+
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T + ++AC+ G+Q+H ++R D+ + N L+D Y KC +
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLR-SGFDTDVSVCNGLIDFYGKCKQ--------- 259
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++S+ ++FT+M +N VSW +L+A Y QN E+E+A L
Sbjct: 260 ----------------------IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ +++ V + + ++L+ACA +A L+LGR H H VK + E IFVG++L
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV------ERTIFVGSAL 351
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL--CGEKP 490
+DMY KCG +ED + F+ M E++ V+ N++I G A G AL LF++M CG P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+++T + +L ACS AG VE G K F SM +G+ P +HY+C+VD+LGRAG ++ A
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ MP+QP +WG+L AC++H LG A+ L +++P +SG +VLLSN +A GRW
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 531
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E VR+ ++ G+ K G SWI + V+ F KD+ H LNKEI L L EM+
Sbjct: 532 AEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAA 591
Query: 671 GYVPN 675
GY P+
Sbjct: 592 GYKPD 596
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
RS K IV F+ SS +L +C + R +HA +K+ IF+ + L+D+Y
Sbjct: 300 RSRKDIVETSDFMISS----VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 355
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
KCGC+ + + FD+M KN+ T NS+I G G +D A LF M R
Sbjct: 356 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 314/566 (55%), Gaps = 75/566 (13%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFS-EALGYFVKMHSENFALSEYSFGSALSACA 162
A L A + + +N+++ G A + S E L + +M S+ Y+ L ACA
Sbjct: 92 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 151
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
S + G +VH K +SDVY+ + L+ MY C + AR+VFD +R++VSW +
Sbjct: 152 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTT 211
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y + G A +EG+ ++ ++R
Sbjct: 212 MIQGYVKMGFA-----------------------------------REGVGLY--IIRNS 234
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+ D+ +GNALVDMY KCG N AR VF MP++NVVS SM+SG A
Sbjct: 235 NVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLA------------ 282
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
Q G+ +E+L +FR ++R V P T +LN+CANL L+
Sbjct: 283 -------------------QKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 323
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
LG+ H ++ ++ +R +D F+GN+L+DMY KCGS++ C +F+ M +D S+ A
Sbjct: 324 LGKWVHAYLDRNQIR------ADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTA 377
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MIVG A +G G +AL LF +M G +PD VT +GVL ACSH GLVEEGRKYF MS +
Sbjct: 378 MIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIY 437
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
L P +HY CMVDLLGRAG ++EA+ I MP++PDA + G+LL ACK+H + LGE V
Sbjct: 438 NLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESV 497
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
KK+ +IEP G YVL+SN+Y+ RW + +++RK M++R + K PGCS IE+ G ++
Sbjct: 498 MKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHE 557
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMK 668
F DK HP KEIY +L + +K
Sbjct: 558 FQKGDKSHPKIKEIYKLLDEIMSHLK 583
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 34/343 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ++ D+ +L +C S++V + VH + IK AS++++ N L+ +YA C
Sbjct: 129 KQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVC 188
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD------------------------ 103
+ ARKVFD +++ +W ++I G +K GF +
Sbjct: 189 DVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVD 248
Query: 104 ----------ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
A ++F MP ++ SWNSM+SG AQ +F E+L F KM + +
Sbjct: 249 MYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVT 308
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ L++CA ++G VHA L +++ +D ++G+AL+DMY KCG + A VF M
Sbjct: 309 LVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMN 368
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+++ S+ ++I +G AL++F M GIEPDEVT V++AC+ + +EG +
Sbjct: 369 RKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 428
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ LR L +VD+ + G +NEA MPI
Sbjct: 429 YFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 471
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/655 (35%), Positives = 366/655 (55%), Gaps = 76/655 (11%)
Query: 41 VHARIIKSQFA------------------SEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+H I+ SQF+ S + N LI K G + AR+VF++M +
Sbjct: 35 LHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +W ++ITG +K G I++A LF ++ +W ++VSG+ + +R EA F
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDA 154
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +N V + +I+ Y + G
Sbjct: 155 MPVKN---------------------------------------VISWNTMIEGYARKGW 175
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A +F+ M ERN+VSWN++IT + Q +A E+F RM E D ++ ++V+
Sbjct: 176 IDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMP----ERDVISWTTMVAG 231
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ K G ARL+ + ++V N ++ YA+ +L+EA +F++MP R + S
Sbjct: 232 LS-----KNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSS 286
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK-RES 380
+M++G+ + ++ A F KM +NVV+W A+I+G+ Q+G +EEAL +F ++ +
Sbjct: 287 WNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANN 346
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P TF ++L AC+ LA L G+Q H + K + E +D+ ++LI+MY KCG
Sbjct: 347 VKPNEGTFVSVLGACSKLAALCEGQQIHQIISKT----VYQEVADVV--SALINMYSKCG 400
Query: 441 SVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+E +IF+ ++ RD VSWN MI A +G+G +A+ LF +M G +PD+VT I +
Sbjct: 401 ELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIAL 460
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSHAGLV+EG K F ++ ++ + +DH+TC+VDL GRAG L EA I+ + ++P
Sbjct: 461 LSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKP 520
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
A +W +LLA C VH +I LG+ A+KLLE EP N+G Y++LSN+YA G+W E VR
Sbjct: 521 SASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRM 580
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
M+ +G+ KQPGCSWIE+ V+VF+V D H + IYL+L L +MK++G+
Sbjct: 581 KMKDKGLKKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHT 635
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 230/489 (47%), Gaps = 69/489 (14%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ +R + + RR + + + N +I+ YA+ G + A +F+KM
Sbjct: 132 WTALVSGYVRWNRIEEARR----LFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP 187
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+NV +WN++IT ++ +D+A LF MPERD SW +MV+G +++ R +A F K
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N S+ + + A ++ ++ + + SS + +I + + G+
Sbjct: 248 MPVRNVV----SWNTMIIGYAQNMRLDEAFKLFEQMPERELSS----WNTMITGFIQNGK 299
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVS 260
+ A F M +N+V+W ++I+ + Q+G + +AL++F M A+ ++P+E T SV+
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 261 ACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI--R 317
AC+ LAA EG QIH + + + D+V +AL++MY+KCG+L AR +FD I R
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVV--SALINMYSKCGELELARKIFDDGSIGHR 417
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VVS WN +IA Y +G +A+ LF ++
Sbjct: 418 DVVS-------------------------------WNGMIAAYAHHGHGHKAISLFDEMQ 446
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------NS 431
P + T+ LL+AC +H +V GL+ D +
Sbjct: 447 ALGFRPDNVTYIALLSAC-----------SHAGLVDEGLKLFENLVRDRSIKLREDHFTC 495
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
L+D++ + G +++ + + + S W A++ GC N +G LG L +P
Sbjct: 496 LVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGC--NVHGHIDLGKLTAEKLLETEP 553
Query: 491 DHVTMIGVL 499
++ VL
Sbjct: 554 ENAGTYLVL 562
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ F +L +C + ++ + +++H I K+ + + + LI++Y+KCG L ARK+F
Sbjct: 350 NEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIF 409
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S+ RD SWN M++ +A H +A+
Sbjct: 410 DD-----------------------------GSIGHRDVVSWNGMIAAYAHHGHGHKAIS 440
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSR---YSSDVYMGSAL 192
F +M + F ++ + LSAC AG VD G ++ L + R D + + L
Sbjct: 441 LFDEMQALGFRPDNVTYIALLSACSHAGLVD--EGLKLFENLVRDRSIKLREDHF--TCL 496
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVS-WNSLI 224
+D++G+ GR+ A G+ + S W +L+
Sbjct: 497 VDLFGRAGRLQEAFDFIKGLEVKPSASVWAALL 529
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/641 (36%), Positives = 339/641 (52%), Gaps = 120/641 (18%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
HA ++K S+ F++N +ID+YA+ G + ARK
Sbjct: 118 HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARK-------------------------- 151
Query: 102 DDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+F +P ER WN+MVSG+ + + +A F M N
Sbjct: 152 -----VFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERN------------- 193
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
V +A++ Y K + ARR FD M ER++VS
Sbjct: 194 --------------------------VITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS 227
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN++++ Y QNG A +AL +F M+ +GIEPDE T +V+SAC+S
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSS--------------- 272
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
R D L +LV R + + N T+++ YAK + SAR
Sbjct: 273 -----RGDPCLAASLV------------RTLHQKRIQLNCFVRTALLDMYAKFGDLDSAR 315
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANL 398
+F M RNVV+WN++IAGY QNG++ A+ LF+ ++ + + P T ++++AC +L
Sbjct: 316 KLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 375
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVG--NSLIDMYMKCGSVEDGCRIFETMVERD 456
L+LG +RFL+ + + + N++I MY +CGS+ED R+F+ M RD
Sbjct: 376 GALELGNWV--------VRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 427
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VS+N +I G A +G+G EA+ L M G +PD VT IGVL ACSHAGL+EEGRK F
Sbjct: 428 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 487
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
S+ P DHY CMVDLLGR G L++AK +E MPM+P A ++GSLL A ++H+ +
Sbjct: 488 SIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 542
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
LGE A KL E+EP NSG ++LLSN+YA GRW +V R+R+ M+K GV K G SW+E
Sbjct: 543 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 602
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
G ++ F+V D+ H + +IY +L L ++M+ GY+ + S
Sbjct: 603 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 643
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 353/657 (53%), Gaps = 75/657 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL-GYFVKMHSENF 147
NS++ K G + D R+F M +RD SWNS+++G++ +RF++ + F M E +
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSW-NRFNDQVWELFCLMQVEGY 199
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
Y+ + ++A A +G Q+HAL+ K + ++ + ++LI M K G + AR
Sbjct: 200 RPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARV 259
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA- 266
VFD M ++ VSWNS+I + NG +A E F M +G +P T ASV+ +CASL
Sbjct: 260 VFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319
Query: 267 ----------AFKEGLQIHAR--------LMRCEKLRN------------DLVLGNALVD 296
K GL + L +C+++ + +V A++
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 297 MYAKCGKLNEARCVFDRMPIRNV------------------VSETS---MVSGYAKASSV 335
Y + G ++A +F M V +SE + + Y K+SSV
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSV 439
Query: 336 KSARL--------------MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+A L +F + ++V++W+A++AGY Q GE EEA +F L RE +
Sbjct: 440 GTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGI 499
Query: 382 CPTHYTFGNLLNAC-ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +TF +++NAC A A ++ G+Q H + +K LR + + V +SL+ +Y K G
Sbjct: 500 KPNEFTFCSIINACTAPTASVEQGKQFHAYAIK--LRL----NNALCVSSSLVTLYAKRG 553
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++E IF+ ERD VSWN+MI G AQ+G +AL +F++M + D +T IGV+
Sbjct: 554 NIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVIS 613
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+HAGLV +G+ YF+ M +H + P +HY+CM+DL RAG L +A +I MP P A
Sbjct: 614 ACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAA 673
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+W +LAA +VHRNI LG+ A+K++ +EP +S YVLLSN+YA G W E V VRKLM
Sbjct: 674 TVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLM 733
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
KR V K+PG SWIE+ F+ D HPL+ IY L L ++ VGY P+ +
Sbjct: 734 DKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTN 790
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 226/466 (48%), Gaps = 45/466 (9%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +LF P RD N ++ +++ D+ EAL FV ++ + Y+ LS CAG
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
S + +G QVH K + +G++L+DMY K G V RRVFD M +R++VSWNSL
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+T Y N E+F M G PD T+++V++A A+ A G+QIHA +++
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKL-G 233
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ ++ N+L+ M +K G L +AR VFD M ++ V
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSV----------------------- 270
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
SWN++IAG+ NG++ EA F ++ PTH TF +++ +CA+L +L L
Sbjct: 271 --------SWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGL 322
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNA 462
R H +K GL ++ V +L+ KC ++D +F M + VSW A
Sbjct: 323 VRVLHCKTLKSGL------STNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTA 376
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MI G QNG +A+ LF M G KP+H T +L HA + E + E
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL-TVQHAVFISEIHAEVIKTNYEK 435
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ T ++D + G + +A + E + + D + W ++LA
Sbjct: 436 SSSV----GTALLDAFVKIGNISDAVKVFELIETK-DVIAWSAMLA 476
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 173/333 (51%), Gaps = 38/333 (11%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ FA ++ SC K + R +H + +KS ++
Sbjct: 305 ATFASVIKSCASLKELGLVRVLHCKTLKSGLST--------------------------- 337
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCSWNSMVSGFAQHDRFSEALGY 138
N+NV T +++ L K IDDA LF+ M + SW +M+SG+ Q+ +A+
Sbjct: 338 --NQNVLT--ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNL 393
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F M E + +++ + L+ +++HA + K+ Y +G+AL+D + K
Sbjct: 394 FSLMRREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVK 449
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G +S A +VF+ + +++++W++++ Y Q G +A ++F ++ GI+P+E T S+
Sbjct: 450 IGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSI 509
Query: 259 VSAC-ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++AC A A+ ++G Q HA ++ +L N L + ++LV +YAK G + A +F R R
Sbjct: 510 INACTAPTASVEQGKQFHAYAIKL-RLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKER 568
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
++VS SM+SGYA+ K A +F +M +RN+
Sbjct: 569 DLVSWNSMISGYAQHGQAKKALEVFEEMQKRNL 601
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 12/240 (5%)
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
+ S + A+ +F + R++ N L+ Y++ + +EAL LF L R + P YT
Sbjct: 48 RDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSC 107
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L+ CA + +G Q H VK GL + VGNSL+DMY K G+V DG R+F+
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGL------VHHLSVGNSLVDMYTKTGNVRDGRRVFD 161
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M +RD VSWN+++ G + N + + LF M + G +PD+ T+ V+ A ++ G V
Sbjct: 162 EMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAI 221
Query: 511 GRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G + + + K L + C ++ +L ++G L +A+ + + M D+V W S++A
Sbjct: 222 GMQIHALVVK---LGFETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIA 277
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 22 FAKLLDSCLR-SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F ++++C + SV ++ HA IK + + + + + L+ +YAK G + A ++F +
Sbjct: 506 FCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQ 565
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+++ +WNS+I+G +AQH + +AL F
Sbjct: 566 KERDLVSWNSMISG-------------------------------YAQHGQAKKALEVFE 594
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKC 199
+M N + +F +SACA + G + +++ + + S +ID+Y +
Sbjct: 595 EMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRA 654
Query: 200 GRVSCARRVFDGM 212
G + A + +GM
Sbjct: 655 GMLGKAMDIINGM 667
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 332/620 (53%), Gaps = 79/620 (12%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
+F +S + LL +C + S +VHARII+ + FI ++ + +
Sbjct: 21 SFDTTSSISTLLKAC---TTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTT 77
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
VF+ +S+ + WN+ I G++++ S
Sbjct: 78 SVFNGVSSPSTVLWNTYI-------------------------------KGYSENYSVSL 106
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+ F++M + ++++ S + AC+ K G H + DV++ ++LID
Sbjct: 107 TVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLID 166
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+YGKCG + CAR+VFD M ERN+VSW ++I Y
Sbjct: 167 LYGKCGEILCARKVFDEMGERNVVSWTAMIAGY--------------------------- 199
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
A+F + + AR + E + V NA++ Y KCG L AR +FD M
Sbjct: 200 -----------ASFSD--LVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEM 246
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P RNVVS T+M+ GYAK+ + SAR +F + ER+VV+W+ALI+GY QNG+ EA+ +F
Sbjct: 247 PHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFL 306
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ +V P + +L++AC+ + L+L + +V K + V +LID
Sbjct: 307 EMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAH-----VIAALID 361
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
M KCGS++ ++FE M +RD +S+ +M+ G + +G G +A+ LF +ML G PD V
Sbjct: 362 MNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVA 421
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+L ACS AGLV+EG YF SM ++ + P DHY CMVDLLGRAG L EA L+++M
Sbjct: 422 FTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSM 481
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P++P A WG+LL ACK+H +I LGE VA +L E+EP N+G YVLLSN+YA +W +V
Sbjct: 482 PVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVS 541
Query: 615 RVRKLMRKRGVVKQPGCSWI 634
+R MR+RG+ K PGCSWI
Sbjct: 542 LLRNKMRERGIRKIPGCSWI 561
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 314/538 (58%), Gaps = 45/538 (8%)
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+ + +A++AC G QVHA + K+RY VY+ + LI +Y +CG + AR V DG
Sbjct: 42 HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN+VSW ++I+ Y Q+G ++ALE+F+RM+ +G + +E TLA+V+++C + ++
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+H+ +++ + + +G++L+DMY K G + E
Sbjct: 162 EQVHSLVVKT-NFESHMFVGSSLLDMYGKSGNIQE------------------------- 195
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
AR +F + ER+ VS A+I+GY Q G ++EAL LFR L + + TF L
Sbjct: 196 ------ARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTL 249
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L + + LA L G+Q H +++ L F I + NSLIDMY KCG + R+F+
Sbjct: 250 LTSLSGLASLNYGKQVHGLILRKELPFF------IVLQNSLIDMYSKCGKLLYSRRVFDN 303
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M +R +SWNAM++G ++G G E + LF+ M KPD VT++ VL CSH GLV+EG
Sbjct: 304 MPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSVTLLAVLSGCSHGGLVDEG 362
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
F + KE HY C++DLLGR+G L +A LIE MP +P IWGSLL AC+
Sbjct: 363 LDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACR 422
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH N+ +GE VA+KLL++EP N+G YV+LSN+YA G W +V RVRKLM + V K+P
Sbjct: 423 VHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAK 482
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYE 683
SWI + ++ F ++ HP K+I +K + ++K G+VP+ S DDE E
Sbjct: 483 SWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKE 540
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 205/363 (56%), Gaps = 35/363 (9%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ +C+ +++ + R+VHA ++K+++ +++ RLI +Y +CG L
Sbjct: 48 ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGAL--------------- 92
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
DDA + MPER+ SW +M+SG++Q R +EAL F++M
Sbjct: 93 ----------------DDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRA 136
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+E++ + L++C + QVH+L+ K+ + S +++GS+L+DMYGK G + A
Sbjct: 137 GCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEA 196
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VFD + ER+ VS ++I+ Y Q G +AL++F ++ +SG++ + VT +++++ + L
Sbjct: 197 RKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGL 256
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A+ G Q+H ++R E L +VL N+L+DMY+KCGKL +R VFD MP R+ +S +M
Sbjct: 257 ASLNYGKQVHGLILRKE-LPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAM 315
Query: 326 VSGYAKASSVKSARLMFTKMLER---NVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+ GY + + +F M E + V+ A+++G + G +E L +F L+ +E
Sbjct: 316 LMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNA 375
Query: 383 PTH 385
H
Sbjct: 376 VIH 378
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 151/294 (51%), Gaps = 32/294 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L SC +S+ +VH+ ++K+ F S +F+ + L+D+Y K G + ARKV
Sbjct: 145 LATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKV----- 199
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F +PERD S +++SG+AQ EAL F +
Sbjct: 200 --------------------------FDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQ 233
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
++S + +F + L++ +G G QVH L+ + + + ++LIDMY KCG+
Sbjct: 234 LYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGK 293
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RRVFD M +R+ +SWN+++ Y ++G + +++F R M ++PD VTL +V+S
Sbjct: 294 LLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLF-RTMTEEVKPDSVTLLAVLSG 352
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
C+ EGL I +++ + + ++D+ + G+L +A + + MP
Sbjct: 353 CSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/664 (33%), Positives = 364/664 (54%), Gaps = 54/664 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ S + + S S +++ R+I++ A F +L+ + G YG
Sbjct: 181 DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYG----- 235
Query: 78 DKMSNKNVFTWNSIITGLLKWGFID---------DASRLFASMPERDQCSWNSMVSGFAQ 128
K+ + ++ W + +LK +D DA ++ E D W +++SGF Q
Sbjct: 236 -KLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQ 294
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+F EA+ F +M + + +++ L+AC+ + +G Q+H+ + + +DV +
Sbjct: 295 SLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSV 354
Query: 189 GSALIDMYGKCGR-VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
G++L+DMY KC + A R F G+ N++SW SLI + ++G ++++VF M G
Sbjct: 355 GNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVG 414
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+ TL++++ AC ++ + + ++H +++ ND+V+GNALVD YA G +++A
Sbjct: 415 VRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK-NNADNDVVVGNALVDAYAGLGMVDDA 473
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
V TSM M R+V+++ +L Q G +E
Sbjct: 474 WHV------------TSM-------------------MKHRDVITYTSLATRINQTGNHE 502
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
AL + + ++ V ++ + L+A A + ++ G+Q H + VK GL S I
Sbjct: 503 MALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGL------GSWIS 556
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V N L+D+Y KCG + D R F + E D VSWN +I G A NG+ + AL F+ M L G
Sbjct: 557 VSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAG 616
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+PD +T + VL ACSH GLV+ G YF SM ++HG+ P DHY C+VDLLGRAG L+EA
Sbjct: 617 VEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEA 676
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+IE MP +PDA+I+ +LL ACK+H NI LGE++A++ LE++PS+ YVLL+N+Y +
Sbjct: 677 MNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDS 736
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GR + R++MR+RGV K PG SW+E V++F D HP +I+ ++ L +
Sbjct: 737 GRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQF 796
Query: 668 KRVG 671
+ G
Sbjct: 797 RNQG 800
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 276/536 (51%), Gaps = 73/536 (13%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSI 91
S+SV D +H+ IIK F ++F+ N L+ +Y KC + AR++FD+M ++V +W +
Sbjct: 28 SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTML 87
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
++ K G ++A LF SM ++SG +E
Sbjct: 88 MSAYGKIGNHEEALELFDSM----------LISGEYP---------------------NE 116
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
++ +AL +C+ +F GT+ AL++KS + S+ +GSALID Y KCG A RVF+
Sbjct: 117 FTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEY 176
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M +IVSW +++ + + G S AL+++ RM+ +G+ P+E T +++A +S G
Sbjct: 177 MNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA-SSFLGLNYG 235
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+HA LM ++ +LVL ALVDMY KC + +A
Sbjct: 236 KLVHAHLMMW-RIELNLVLKTALVDMYCKCQSIEDA------------------------ 270
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
VK ++L LE +V W A+I+G+TQ+ + EA+ F ++ V P ++T+ +
Sbjct: 271 ---VKVSKL----TLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGI 323
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS-VEDGCRIFE 450
LNAC+++ L LG+Q H+ VV GL E+D+ VGNSL+DMYMKC + +ED R F
Sbjct: 324 LNACSSILALDLGKQIHSRVVMAGL------ENDVSVGNSLVDMYMKCSNMIEDAVRAFR 377
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ + +SW ++I G +++G E++ +F M G +P+ T+ +L AC + +
Sbjct: 378 GIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQ 437
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
RK + K + + +VD G +D+A + +M D + + SL
Sbjct: 438 TRKLHGYIIKNNADNDVVVG-NALVDAYAGLGMVDDAWH-VTSMMKHRDVITYTSL 491
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D A L + + +++H +KS S I + N L+D+Y KCGC++ A +
Sbjct: 518 MDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRS 577
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM------PERDQC 117
F +++ + +WN +I GL G + A F M P++ C
Sbjct: 578 FLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITC 624
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/678 (33%), Positives = 373/678 (55%), Gaps = 61/678 (8%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A LD + +A L +C R + + +VH +++KS + L+D Y+ C L AR
Sbjct: 63 AGLDEATYASALGACARGRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAAR 122
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQ--HDR 131
+FD + N W+ ++ L+++ + DA L MP RD +W +++SG+A+ ++
Sbjct: 123 TLFDTLHANNELLWSPMVVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEY 182
Query: 132 FSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
++L FV++ +E+ + +E+++ S L AC + G +H L +S + S+ + S
Sbjct: 183 CCKSLELFVQLLAEDGVMPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITS 242
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
AL+D+Y + G V A V++G++ ++++ N+LI + G DA VF +M E
Sbjct: 243 ALVDLYCRSGAVDDAVMVYNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQM----TEH 298
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D + N ++ YA G+L + R +
Sbjct: 299 DSGSY------------------------------------NLMIKAYADEGRLEDCRRM 322
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML-ERNVVSWNALIAGYTQNGENEEA 369
F+ MP RN+V+ SM+S + ++ R +F ++ ERN V+WN++I+GY QN ++ EA
Sbjct: 323 FEMMPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEA 382
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF ++ R S+ + TF LL+ACA + ++ G+ H + K ES+ +VG
Sbjct: 383 LKLFAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPF------ESNGYVG 436
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+L+DMY KCG V D F ++ + SW ++I G AQNG+ EA+ F +ML K
Sbjct: 437 TALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVK 496
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+ +T +G+L A + AGLV +G ++F SM + +G+ P +HYTC VDLLGRA + EA+
Sbjct: 497 PNEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEK 555
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
I MP+ D V+WG+LL AC ++ +GE VA+KL + + YV +SN+YA+LG+
Sbjct: 556 FISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGK 615
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W +VV+VR +R K+PGCSWIE+ V+VF+V+D+ HP +EIYL+L+ L
Sbjct: 616 WEDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDL------ 669
Query: 670 VGYVPNASDDEAYEEQNG 687
V N S E +E +G
Sbjct: 670 ---VSNISYSETDDETHG 684
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 229/489 (46%), Gaps = 90/489 (18%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+ V+ A+ R +ALG +MH L E ++ SAL ACA +MG QVH +
Sbjct: 34 SWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQV 93
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR------------------------ 213
KS +G++L+D Y C + AR +FD +
Sbjct: 94 VKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDAL 153
Query: 214 --------ERNIVSWNSLITCYEQ--NGPASDALEVFVRMMA-SGIEPDEVTLASVVSAC 262
R++ +W ++I+ Y + N +LE+FV+++A G+ P+E T SV+ AC
Sbjct: 154 DLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRAC 213
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ A + G IH L++ ++ ++ +ALVD+Y + G +++A V++ + + ++++
Sbjct: 214 VKMGALEFGRSIHGCLIQ-SGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++++G+ + A+L+F++M E + S+N +I Y G E+ +F ++ R
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRR--- 329
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
N+ L NS++ + ++ G +
Sbjct: 330 --------------NMVTL----------------------------NSMMSVLLQNGKL 347
Query: 443 EDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
E+G ++FE + ER+ V+WN+MI G QN +EAL LF M + T +L A
Sbjct: 348 EEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKLFAVMCRLSIECSASTFPALLHA 407
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDH---YTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
C+ G +E+G+ + + K P + + T +VD+ + GC+ +A+ + M P
Sbjct: 408 CATIGTIEQGKMVHALLCK----TPFESNGYVGTALVDMYSKCGCVSDARAAFSCI-MSP 462
Query: 559 DAVIWGSLL 567
+ W SL+
Sbjct: 463 NVASWTSLI 471
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 182/357 (50%), Gaps = 24/357 (6%)
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+SWN+ + + + G DAL RM S DE T AS + ACA + G Q+H +
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 278 LMRCEKLRNDL-VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+++ +D V+G +L+D Y+ C L+ AR +FD + N + + MV + + +
Sbjct: 93 VVKSGS--DDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLS 150
Query: 337 SARLMFTKM-LERNVVSWNALIAGYTQNGENE---EALGLF-RLLKRESVCPTHYTFGNL 391
A + +M R++ +W A+I+GY + G NE ++L LF +LL + V P +T+ ++
Sbjct: 151 DALDLLQRMPPSRDLFAWTAIISGYAR-GANEYCCKSLELFVQLLAEDGVMPNEFTYDSV 209
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L AC + L+ GR H +++ SG ES+ + ++L+D+Y + G+V+D ++
Sbjct: 210 LRACVKMGALEFGRSIHGCLIQ------SGFESEQLITSALVDLYCRSGAVDDAVMVYNG 263
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ ++ N +I G G +A +F +M + D + ++ A + G +E+
Sbjct: 264 LQMPSLITSNTLIAGFISMGRTEDAKLVFSQM----TEHDSGSYNLMIKAYADEGRLEDC 319
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
R+ F M + + + M+ +L + G L+E + L E + + + V W S+++
Sbjct: 320 RRMFEMMPRRNMVT-----LNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMIS 371
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 344/654 (52%), Gaps = 69/654 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL S +KS +++HA +I S + ++ +L YA CG + A +FD + K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N F W N M+ G+A + ++L + +M
Sbjct: 125 NSFLW-------------------------------NFMIRGYASNGLPMKSLVLYREML 153
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+++ L AC + ++G +VH+ + SD+Y+G++L+ MY K G +
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR VFD M ER++ SWN++I+ Y +N + A VF M +G+ D TL ++SACA
Sbjct: 214 TARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L A KEG IH +R + N+L++MY C C+ D
Sbjct: 274 DLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN------CMVD----------- 316
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
AR +F ++ ++ VSWN++I GY +NG+ E+L LFR + + P
Sbjct: 317 --------------ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGP 362
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
TF +L AC +A L+ G H+++VK G +++ VG +L+DMY KCGS+
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGF------DANTIVGTALVDMYSKCGSLA 416
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
R+F+ M ++ VSW+AM+ G +G G EA+ + M PD+ +L ACS
Sbjct: 417 CSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACS 476
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV EG++ F M KE+ + P HY+CMVDLLGRAG LDEA +I M ++P + IW
Sbjct: 477 HAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIW 536
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
+LL A ++H+NI L E A+K+ ++ P Y+ LSN+YA RW +V RVR ++R++
Sbjct: 537 AALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRK 596
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
G+ K PGCS+IE+ V+ F+V DK H ++IY L L +++K GY P+ S
Sbjct: 597 GLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTS 650
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 232/469 (49%), Gaps = 45/469 (9%)
Query: 109 ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS---ENFALSEYSFGSALSACAGSV 165
A + RD+ +NS S F+Q D ++ + + M + + L+ G+ L + +
Sbjct: 16 AILGGRDR-EYNSFTSHFSQGD-VAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTK 73
Query: 166 DFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
FK G Q+HA ++S S ++ Y+ + L Y CG +S A +FDG+ +N WN +I
Sbjct: 74 SFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMI 133
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y NG +L ++ M+ G D T V+ AC L + G ++H+ ++ C L
Sbjct: 134 RGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVC-GL 192
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+D+ +GN+L+ MYAK G + AR VFDRM R++ S +M+SGYAK
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAK------------- 239
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
N ++ A +F L+ + + T LL+ACA+L ++ G
Sbjct: 240 ------------------NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEG 281
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ H + V++ + G + F NSLI+MY C + D R+FE + +D VSWN+MI
Sbjct: 282 KVIHGYAVRNSI----GNYNKFFT-NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMI 336
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
+G A+NG E+L LF++M L G PD VT I VL AC + G S + K+ G
Sbjct: 337 LGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK-GF 395
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
T +VD+ + G L ++ + + MP V W +++A +H
Sbjct: 396 DANTIVGTALVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVAGYGLH 443
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 206/442 (46%), Gaps = 81/442 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C V RRVH+ ++ S+I++ N L+ +YAK G + AR VF
Sbjct: 160 DNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVF 219
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M+ +++ +W N+M+SG+A++ A
Sbjct: 220 DRMAERDLTSW-------------------------------NTMISGYAKNADSGTAFL 248
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMY 196
F M + LSACA K G +H ++ + + + ++LI+MY
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMY 308
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
C + ARR+F+ +R ++ VSWNS+I Y +NG A ++L +F RM G PD+VT
Sbjct: 309 CNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFI 368
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V+ AC +AA + G+ IH+ L++ + + ++G ALVDMY+KCG L +R VFD MP
Sbjct: 369 AVLGACDQIAALRYGMSIHSYLVK-KGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPD 427
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+++VS ++MV AGY +G EA+ + +
Sbjct: 428 KSLVSWSAMV-------------------------------AGYGLHGRGREAISILDGM 456
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL---- 432
K SV P + F ++L+AC +H +V G E + V +L
Sbjct: 457 KANSVIPDNGVFTSILSAC-----------SHAGLVVEGKEIFYKMEKEYNVKPALSHYS 505
Query: 433 --IDMYMKCGSVEDGCRIFETM 452
+D+ + G +++ I TM
Sbjct: 506 CMVDLLGRAGHLDEAYVIIRTM 527
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 149/303 (49%), Gaps = 32/303 (10%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGAR 74
F D + LL +C K+V + + +H +++ + F N LI++Y C C+
Sbjct: 259 FADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMV--- 315
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
DA RLF + +D SWNSM+ G+A++ E
Sbjct: 316 ----------------------------DARRLFERVRWKDTVSWNSMILGYARNGDAFE 347
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+L F +M + + +F + L AC + G +H+ L K + ++ +G+AL+D
Sbjct: 348 SLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVD 407
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG ++C+RRVFD M ++++VSW++++ Y +G +A+ + M A+ + PD
Sbjct: 408 MYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGV 467
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++SAC+ EG +I ++ + ++ L + +VD+ + G L+EA + M
Sbjct: 468 FTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM 527
Query: 315 PIR 317
I+
Sbjct: 528 EIK 530
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/529 (38%), Positives = 303/529 (57%), Gaps = 44/529 (8%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + L+ Y G S AR +FD E+N+V +N +I Y N +AL +F M+
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+ PD T V+ AC+ L + GLQ+H +++ L +L +GNALV MY KCG L
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALVAMYGKCGCL 188
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKA-------------------------------- 332
EAR V D+MP R+VVS SMV+GYA++
Sbjct: 189 REARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVV 248
Query: 333 -----SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+V+ MF +M ++N++SWN +IA Y N EA+ LF ++ + P T
Sbjct: 249 CYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+LL AC +L+ L LGR+ H ++ K LR ++ + N+L+DMY KCG +E+
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNLR------PNLLLENALLDMYAKCGCLEEARD 362
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M RD VSW +M+ ++G G +A+ LF KML G+ PD + + VL ACSH GL
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+++GR YF M++++G+ P +H+ CMVDL GRAG ++EA + I+ MPM+P+ +WG+LL
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
+AC+VH + +G A L ++ P SG YVLLSN+YA+ G W +V+ VR M+K G+ K
Sbjct: 483 SACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK 542
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
PG S +E+ G V+ F+ D+ HP K IY L +L +MK +GY+P
Sbjct: 543 VPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 38/349 (10%)
Query: 6 SVKQIVGDLAF-LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
S+ Q++ AF D F +L +C ++ +VH I+K + +FI N L+ +Y
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA-------------------- 104
KCGCL ARKV D+M ++V +WNS++ G + G DDA
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 105 -----------------SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
+F M +++ SWN M++ + + +EA+ F++M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM 302
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ S L AC +G ++H + K ++ + +AL+DMY KCG + AR
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARD 362
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VFD MR R++VSW S+++ Y ++G DA+ +F +M+ SG PD + SV+SAC+
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+G + + + +VD++ + G++ EA +MP+
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPM 471
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 191/407 (46%), Gaps = 54/407 (13%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F E++ +N M+ + ++ + EAL F M S F Y+F L AC+G
Sbjct: 90 ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+ ++G QVH + K +++++G+AL+ MYGKCG + AR+V D M R++VSWNS+
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSM 209
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y Q+G DALE+ M + + D T+AS +S + + IH R K
Sbjct: 210 VAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNMFERMTK 268
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMP---------------------------- 315
+L+ N ++ +Y NEA +F +M
Sbjct: 269 --KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 316 ----------IR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+R N++ E +++ YAK ++ AR +F KM R+VVSW ++++ Y ++G
Sbjct: 327 RLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS---G 421
+ +A+ LF + P F ++L+AC++ L GR H R ++ G
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR--------HYFRMMTEQYG 438
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D++ + G VE+ + M +E + W A++ C
Sbjct: 439 IVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A LL +C ++ RR+H I K + ++N L+D+YAKCGCL AR VF
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVF 364
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM ++V +W S+++ + G DA LFA M + Q
Sbjct: 365 DKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP------------------- 405
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
+F S LSAC+ G +D F+M T+ + ++ + + +
Sbjct: 406 ------------DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF------A 447
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
++D++G+ G V A M E N W +L++
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 345/659 (52%), Gaps = 74/659 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL + R S+ ++HA ++K F S+ + N LID+YAKCG L+ A +VFD
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD--- 63
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
MPER+ SW +++ GF H E L F +
Sbjct: 64 ----------------------------GMPERNVVSWTALMVGFLHHGEARECLRLFGE 95
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++ + L AC G + G Q+H + ++ + + ++L+ MY K
Sbjct: 96 MRGSGTSPNEFTLSATLKACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRW 153
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVS 260
ARRVFD + RN+ +WNS+I+ Y G D+L VF M E PDE T AS++
Sbjct: 154 TGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLK 213
Query: 261 ACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC+ L A +EG Q+HA + +R ++ +L AL+D+Y KC R+P+
Sbjct: 214 ACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKC----------HRLPV--- 260
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
A +F + RN + W +I G+ Q G+ +EA+ LFR
Sbjct: 261 ------------------AMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSS 302
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V + +++ A+ A ++ G+Q H + K + D+ V NSL+DMY+KC
Sbjct: 303 GVRADGHVLSSVVAVFADFALVEQGKQVHCYTAK------TPAGLDVSVANSLVDMYLKC 356
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + R F M R+ VSW AMI G ++G+G EA+ LF++M G + D V + +L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALL 416
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLV+E R+YFS + ++ + P +HY CMVDLLGRAG L EAK LI +MPM+P
Sbjct: 417 SACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+W +LL+AC+VH+++ +G V LL ++ N YV+LSN+ AE G W E +R
Sbjct: 477 VGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGA 536
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFM-VKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNA 676
MR++G+ KQ GCSW E+ V+ F D HP +I L+ + M+ R+GY +A
Sbjct: 537 MRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDA 595
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 200/412 (48%), Gaps = 42/412 (10%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTR---RVHARIIKSQFASEIFIQNRLI 61
R ++ G++ +SP L + L++ TR ++H +++ F + N L+
Sbjct: 87 RECLRLFGEMRGSGTSPNEFTLSATLKACG-GGTRAGVQIHGVCVRTGFEGHDVVANSLV 145
Query: 62 DVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
+Y+K AR+VFD + ++N+ TWNS+I+G G D+ +F M R
Sbjct: 146 VMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRR------- 198
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
HD + E++F S L AC+G + G QVHA ++
Sbjct: 199 -------HDEQPD----------------EFTFASLLKACSGLGAAREGAQVHAAMAVRG 235
Query: 182 YS--SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
S S+ + AL+D+Y KC R+ A +VFDG+ RN + W ++I + Q G +A+ +
Sbjct: 236 VSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCL 295
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F R +SG+ D L+SVV+ A A ++G Q+H + D+ + N+LVDMY
Sbjct: 296 FRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA-GLDVSVANSLVDMYL 354
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNA 355
KCG EA F MP RNVVS T+M++G K + A +F +M E V V++ A
Sbjct: 355 KCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLA 414
Query: 356 LIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
L++ + +G +E F R+ + + P + +++ +L+ ++
Sbjct: 415 LLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 466
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 327/555 (58%), Gaps = 10/555 (1%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK-MHSENF 147
N I + L ++ A+ F + + +N ++ G +Q + +EA+ + M+++
Sbjct: 94 NVIKSYALSRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGI 153
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+F AC+ D G H + K + S +++ ++LI MYG G + A++
Sbjct: 154 LGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQK 213
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VFD M +R++VSWNSLI Y Q + L++F M + + D VT+ V+ AC+ L
Sbjct: 214 VFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLC- 272
Query: 268 FKEGL-QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
++G+ + + + + D+ LGN+L+DMY + G ++ AR VFDRM +N+VS +M+
Sbjct: 273 -EDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAML 331
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+GYA A + +A+ +F +M RNV+SW +I+G Q + +AL LF+ + +V P
Sbjct: 332 TGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEI 391
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T ++L+AC++L L G+ H ++ +H ++ SD++VGN+LIDMY KCG V+
Sbjct: 392 TVSSVLSACSHLGLLDTGQTVHEYMCRHDIK------SDVYVGNALIDMYCKCGVVDKAL 445
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F M ++D VSW +MI+G A NG+ LF +ML G +P H + IG+L AC+HAG
Sbjct: 446 EVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAG 505
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LV++G +YF SM +GL P HY C+VDLL R+G LD A I+ MP+ PD V+W L
Sbjct: 506 LVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRIL 565
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L+ACK+HRN++L E KLLE++PSNSG YVLLSN YA RW + R+R LM V
Sbjct: 566 LSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQ 625
Query: 627 KQPGCSWIEILGHVN 641
K S IE++G N
Sbjct: 626 KPSSWSSIEVIGATN 640
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/488 (28%), Positives = 216/488 (44%), Gaps = 112/488 (22%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F L +C R K V + H +++K F S +FI+N LI +Y G L A+KVF
Sbjct: 156 DNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVF 215
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK M +RD SWNS++ G++Q +RF E L
Sbjct: 216 DK-------------------------------MDDRDLVSWNSLICGYSQCNRFKEVLD 244
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N + + AC+ + + + + DVY+G++LIDMYG
Sbjct: 245 LFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYG 304
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCY------------------------------ 227
+ G V ARRVFD M+E+NIVSWN+++T Y
Sbjct: 305 RRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISG 364
Query: 228 -EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Q SDAL++F MM + ++PDE+T++SV+SAC+ L G +H + R +++
Sbjct: 365 CAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCR-HDIKS 423
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ +GNAL+DMY KCG +++A VF M ++ VS TSM+ G A V + +F++ML
Sbjct: 424 DVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQML 483
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
R+ + PTH +F +L AC
Sbjct: 484 -------------------------------RDGLQPTHGSFIGILLAC----------- 501
Query: 407 AHTHVVKHGLRFLS------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVS 459
H +V GL + G ++ ++D+ + G ++ + M V D V
Sbjct: 502 THAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVL 561
Query: 460 WNAMIVGC 467
W ++ C
Sbjct: 562 WRILLSAC 569
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 161/296 (54%), Gaps = 1/296 (0%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
++++ N LID+Y + G + AR+VFD+M KN+ +WN+++TG G + A +LF MP
Sbjct: 292 DVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMP 351
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
R+ SW M+SG AQ ++ S+AL F +M N E + S LSAC+ G
Sbjct: 352 IRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQT 411
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
VH + + SDVY+G+ALIDMY KCG V A VF M++++ VSW S+I NG
Sbjct: 412 VHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGF 471
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ E+F +M+ G++P + ++ AC +GL+ + LR ++
Sbjct: 472 VDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYG 531
Query: 293 ALVDMYAKCGKLNEARCVFDRMP-IRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+VD+ ++ G+L+ A +MP + +VV ++S ++ A + +K+LE
Sbjct: 532 CVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLE 587
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 59/341 (17%)
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ + S+ + KE HA L+R +N + N
Sbjct: 63 IIKSGFSIKSIKEQ---HAHLIRTHHHKNPKSMSN------------------------- 94
Query: 318 NVVSETSMVSGYAKA-SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-L 375
++ YA + S + A F ++ + ++ +N LI G +Q+ EA+ ++ L
Sbjct: 95 -------VIKSYALSRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDL 147
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + + + TF L AC+ + D+ G+ H V+K G S +F+ NSLI M
Sbjct: 148 MYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGF------GSYLFIENSLIRM 201
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y G + ++F+ M +RD VSWN++I G +Q E L LF M D VTM
Sbjct: 202 YGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTM 261
Query: 496 IGVLCACSHA---GLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTL 550
+ V+ ACS+ G+V+ KY + D Y ++D+ GR G +D A+ +
Sbjct: 262 VKVILACSYLCEDGVVDSMVKYIEDKHVD------IDVYLGNSLIDMYGRRGLVDLARRV 315
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
+ M + + V W ++L +++ AKKL P
Sbjct: 316 FDRMQ-EKNIVSWNAMLTGYATAGDLV----AAKKLFNEMP 351
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/514 (38%), Positives = 314/514 (61%), Gaps = 42/514 (8%)
Query: 167 FKMGTQ---VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
FK+ TQ VH L +S + D+ M + L++MY KCG + AR+VFD M ER+ V+W +L
Sbjct: 64 FKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTL 123
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I+ Y Q+ DAL +F +M+ G P+E TL+SV+ A A+ G Q+H ++C
Sbjct: 124 ISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC-G 182
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+++ +G+AL+D+Y + G +++A+ L+F
Sbjct: 183 FDSNVHVGSALLDLYTRYGLMDDAQ-------------------------------LVFD 211
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
+ RN VSWNALIAG+ + E+AL LF+ + RE P+H+++ +L AC++ L+
Sbjct: 212 ALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQ 271
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H +++K SGE+ F GN+L+DMY K GS+ D +IF+ + +RD VSWN++
Sbjct: 272 GKWVHAYMIK------SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 325
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
+ AQ+G+G EA+ F++M G +P+ ++ + VL ACSH+GL++EG Y+ M K+ G
Sbjct: 326 LTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-G 384
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ HY +VDLLGRAG L+ A IE MP++P A IW +LL AC++H+N LG Y A
Sbjct: 385 IVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 444
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
+ + E++P + GP+V+L N+YA GRW + RVRK M++ GV K+P CSW+EI +++F
Sbjct: 445 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 504
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ D+RHP +EI + + ++K +GYVP+ S
Sbjct: 505 VANDERHPQREEIARKWEEVLAKIKELGYVPDTS 538
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 220/458 (48%), Gaps = 72/458 (15%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
G +D + LL C K ++ R VH +I+S F ++ + N L+++YAKCG L
Sbjct: 44 GSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLE 103
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
ARKV F MPERD +W +++SG++QHDR
Sbjct: 104 EARKV-------------------------------FDKMPERDFVTWTTLISGYSQHDR 132
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+AL F +M F+ +E++ S + A A G Q+H K + S+V++GSA
Sbjct: 133 PFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 192
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+D+Y + G + A+ VFD + RN VSWN+LI + + ALE+F M+ G P
Sbjct: 193 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPS 252
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ AS+ AC+S ++G +HA +++ EKL GN L+DMYAK G +++AR +
Sbjct: 253 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSIHDARKI 310
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FDR+ R+VVS WN+L+ Y Q+G EA+
Sbjct: 311 FDRLAKRDVVS-------------------------------WNSLLTAYAQHGFGNEAV 339
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
F ++R + P +F ++L AC++ L G + + K G+ E+ +V
Sbjct: 340 CWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVL----EAWHYV-- 393
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+++D+ + G + R E M +E W A++ C
Sbjct: 394 TIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 431
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/650 (34%), Positives = 348/650 (53%), Gaps = 74/650 (11%)
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD-------ASRLFASMPERDQCSW 119
C L R + +M + N ++ L+++ + A +F ++ E + W
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+M G A AL +V M S + Y+F L +CA S FK G Q+H + K
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS-------------------- 219
D+Y+ ++LI MY + GR+ A +VFD R++VS
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 220 -----------WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
WN++I+ Y + G +ALE+F MM + + PDE T+ +VVSACA +
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ G Q+H + ++L + NAL+D+Y+KCG+L A +F+R+P +
Sbjct: 283 ELGRQVHL-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----------- 330
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+V+SWN LI GYT +EAL LF+ + R P T
Sbjct: 331 --------------------DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L ACA+L + +GR H ++ K L G + + SLIDMY KCG +E ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKR----LKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F +++ + SWNAMI G A +G + LF +M G +PD +T +G+L ACSH+G++
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ GR F +M++++ + P +HY CM+DLLG +G EA+ +I M M+PD VIW SLL
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
ACK+H N+ LGE A+ L++IEP N G YVLLSN+YA GRW EV + R L+ +G+ K
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
PGCS IEI V+ F++ DK HP N+EIY +L+ + +++ G+VP+ S+
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 209/390 (53%), Gaps = 32/390 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F +L SC +SK+ + +++H ++K ++++ LI +Y + G L A KVF
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK +++V ++ ++I G G+I++A +LF +P +D SWN+M+SG+A+ + EAL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N E + + +SACA S ++G QVH + + S++ + +ALID+Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F+ + ++++SWN+LI Y +AL +F M+ SG P++VT+ S
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + R + + N L +L+DMYAKCG + A VF+
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN---- 428
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+L +++ SWNA+I G+ +G + + LF +
Sbjct: 429 ---------------------------SILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQ 406
++ + P TF LL+AC++ L LGR
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 321/595 (53%), Gaps = 37/595 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ ++F N+ + K+G IDDA LF + +D SWN+++ G ++ EA+
Sbjct: 333 DASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKG 392
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M+ + E SF + ++AC+ + G Q+H L K S+ +GS+LID Y K G
Sbjct: 393 MNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGD 452
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V R+V + +IV N LI QN +A+++F +++ G++P T +S++S
Sbjct: 453 VESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSG 512
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + G Q+H ++ L +D +G +LV Y K RMP
Sbjct: 513 CTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKA-----------RMP------ 555
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+ +L+ +N+V W A+++GY QNG + ++L F ++ V
Sbjct: 556 -------------EDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDV 602
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P TF ++L AC+ + L G++ H ++K G S ++IDMY KCG
Sbjct: 603 HPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATS------AIIDMYSKCGD 656
Query: 442 VEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ F E ++D WN+MI+G A+NGY EAL LF+KM K D VT +GVL
Sbjct: 657 IISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLI 716
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+HAGL+ EGR YF SMSK +G+ P DHY C +DLLGR G L EA+ +I +P +PD
Sbjct: 717 ACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDG 776
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW + LAAC++H++ GE AK+L+E+EP NS YVLLSNMYA G W E R+ M
Sbjct: 777 VIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAM 836
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R++G K PGCSWI + ++F+V+DK H IY +L LTR M + V N
Sbjct: 837 REKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMMHKYDDVEN 891
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 277/597 (46%), Gaps = 93/597 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L +C R ++ ++ H K S F L+++YA+CG + AR+VF
Sbjct: 30 DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVF 89
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM------PERDQC-------------- 117
+S + W S+I+G + G +A LF M P+R C
Sbjct: 90 GGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLE 149
Query: 118 ----------------SWNSMVSGFAQHDRFS-EALGYFVKMHSENFALSEYSFGSALSA 160
+WN+++SG+AQ E G + M + +F S LSA
Sbjct: 150 DARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSA 209
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A + F G QVHA + ++V++GS+LI++Y KCG + A VFD E+N+V W
Sbjct: 210 AANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMW 269
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+++ +N +A+++F+ M G+E DE T SV+ ACA L + G Q+ +
Sbjct: 270 NAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQV-----Q 324
Query: 281 CEKLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
C ++N L + NA +DM++K G +++A+ +F+ +
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITY-------------------- 364
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
++ VSWNAL+ G T N E+EEA+ + + + + V P +F ++NAC+
Sbjct: 365 -----------KDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACS 413
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
N+ + G+Q H +KH + S+ VG+SLID Y K G VE ++ +
Sbjct: 414 NIRATETGKQIHCLAMKHSIC------SNHAVGSSLIDFYSKHGDVESCRKVLAQVDASS 467
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE--GRKY 514
V N +I G QN EA+ LF+++L G KP T +L C+ GL+ G++
Sbjct: 468 IVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT--GLLSSIIGKQV 525
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLG---RAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
K L D + V L+G +A ++A L+ MP + V W ++++
Sbjct: 526 HCYTLKS---GFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVS 579
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 58/380 (15%)
Query: 233 ASDALEVFVRM----MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
A+ L+ FVR G+ PD+ LA+ +SAC+ L A G Q H C+ + L
Sbjct: 8 ATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAH-----CDAEKRGL 62
Query: 289 VLG----NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
G ALV+MYA+CG++ +AR VF + + + V SM+SGY +A + A +FT+
Sbjct: 63 GSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTR 122
Query: 345 M-------------------------------LER-----NVVSWNALIAGYT-QNGENE 367
M L R + V+WNA+I+GY Q+G
Sbjct: 123 MEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEH 182
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
E GL++ ++ + PT TF ++L+A AN GRQ H V+HGL ++++F
Sbjct: 183 EVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGL------DANVF 236
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VG+SLI++Y KCG + D +F+ E++ V WNAM+ G +N Y EA+ +F M G
Sbjct: 237 VGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLG 296
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+ D T + VL AC+H GR+ K A L +D+ + G +D+A
Sbjct: 297 LEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLF-VANATLDMHSKFGAIDDA 355
Query: 548 KTLIEAMPMQPDAVIWGSLL 567
KTL + + D V W +LL
Sbjct: 356 KTLFNLITYK-DTVSWNALL 374
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 35/338 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D FA ++++C ++ +++H +K S + + LID Y+K G + RKV
Sbjct: 401 DEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVL 460
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ ++ N +I GL+ Q++R EA+
Sbjct: 461 AQVDASSIVPRNVLIAGLV-------------------------------QNNREDEAID 489
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMY 196
F ++ + S ++F S LS C G + +G QVH KS + + D +G +L+ Y
Sbjct: 490 LFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTY 549
Query: 197 GKCGRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K A ++ M + +N+V W ++++ Y QNG + +L F RM + + PDEVT
Sbjct: 550 LKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTF 609
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AS++ AC+ + A +G +IH +++ + +A++DMY+KCG + + F +
Sbjct: 610 ASILKACSEMTALSDGKEIHGLIIK-SGFGSYKTATSAIIDMYSKCGDIISSFEAFKELK 668
Query: 316 IR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
+ ++ SM+ G+AK A L+F KM + + S
Sbjct: 669 SKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKS 706
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 34/313 (10%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAK 66
+Q++ D S F+ +L C S ++VH +KS F + + + L+ Y K
Sbjct: 492 QQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLK 551
Query: 67 CGCLYGARKVFDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
A K+ +M + KN+ W +I VSG
Sbjct: 552 ARMPEDANKLLIEMPDHKNLVEWTAI-------------------------------VSG 580
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+ ++L F +M S + E +F S L AC+ G ++H L+ KS + S
Sbjct: 581 YAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSY 640
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
SA+IDMY KCG + + F ++ +++I WNS+I + +NG A +AL +F +M
Sbjct: 641 KTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQ 700
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
S I+ DEVT V+ ACA EG + + + + +D+ + G L
Sbjct: 701 DSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHL 760
Query: 305 NEARCVFDRMPIR 317
EA+ V + +P R
Sbjct: 761 QEAQEVINELPFR 773
>gi|356509350|ref|XP_003523413.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Glycine max]
Length = 678
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/670 (32%), Positives = 346/670 (51%), Gaps = 75/670 (11%)
Query: 34 SVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
++ + R++H +K+ S + + NRL+ +Y++C L A +FD+M N F+WN+++
Sbjct: 15 TLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEMPQTNSFSWNTLV 74
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL--- 149
L G A LF +MP + SWN +VS FA+ A F M S+N +
Sbjct: 75 QAHLNSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFNAMPSKNHLVWNS 134
Query: 150 -------------------------------SEYSFGSALSACAGSVDFKMGTQVHA--L 176
+ +AL ACA S+ G QVHA
Sbjct: 135 IIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLALNCGKQVHARVF 194
Query: 177 LSKSRYSSDVYMGSALIDMYGKCG-------------------------------RVSCA 205
+ D + S+LI++YGKCG R+ A
Sbjct: 195 VDGMGLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSLSALISGYANAGRMREA 254
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R VFD + V WNS+I+ Y NG +A+ +F M+ +G++ D +A+++SA + L
Sbjct: 255 RSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQGDASAVANILSAASGL 314
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ Q+H + + +D+V+ ++L+D Y+KC EA +F + + + +M
Sbjct: 315 LVVELVKQMHVYACKA-GVTHDIVVASSLLDAYSKCQSPCEACKLFSELKEYDTILLNTM 373
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
++ Y+ ++ A+L+F M + ++SWN+++ G TQN EAL +F + + +
Sbjct: 374 ITVYSNCGRIEDAKLIFNTMPSKTLISWNSILVGLTQNACPSEALNIFSQMNKLDLKMDR 433
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
++F ++++ACA + L+LG Q + GL ESD + SL+D Y KCG VE G
Sbjct: 434 FSFASVISACACRSSLELGEQVFGKAITIGL------ESDQIISTSLVDFYCKCGFVEIG 487
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
++F+ MV+ D VSWN M++G A NGYG EAL LF +M G P +T GVL AC H+
Sbjct: 488 RKVFDGMVKTDEVSWNTMLMGYATNGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHS 547
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLVEEGR F +M + + P +H++CMVDL RAG +EA LIE MP Q DA +W S
Sbjct: 548 GLVEEGRNLFHTMKHSYNINPGIEHFSCMVDLFARAGYFEEAMDLIEEMPFQADANMWLS 607
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
+L C H N +G+ A++++++EP N+G Y+ LSN+ A G W VR+LMR +
Sbjct: 608 VLRGCIAHGNKTIGKMAAEQIIQLEPENTGAYIQLSNILASSGDWEGSALVRELMRDKHF 667
Query: 626 VKQPGCSWIE 635
K PGCSW +
Sbjct: 668 QKIPGCSWAD 677
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 224/495 (45%), Gaps = 71/495 (14%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEI--FIQNRLIDVYAKCGCLY 71
+ + D+ A L +C S +++ ++VHAR+ E+ + + LI++Y KCG L
Sbjct: 162 IVYRDAFVLATALGACADSLALNCGKQVHARVFVDGMGLELDRVLCSSLINLYGKCGDLD 221
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A ++ + + + F+ +++I+G G + +A +F S + WNS++SG+ +
Sbjct: 222 SAARIVSFVRDVDEFSLSALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGE 281
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
EA+ F M + + LSA +G + ++ Q+H K+ + D+ + S+
Sbjct: 282 EVEAVNLFSAMLRNGVQGDASAVANILSAASGLLVVELVKQMHVYACKAGVTHDIVVASS 341
Query: 192 LIDMYGK-------------------------------CGRVSCARRVFDGMRERNIVSW 220
L+D Y K CGR+ A+ +F+ M + ++SW
Sbjct: 342 LLDAYSKCQSPCEACKLFSELKEYDTILLNTMITVYSNCGRIEDAKLIFNTMPSKTLISW 401
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS++ QN S+AL +F +M ++ D + ASV+SACA ++ + G Q+ + +
Sbjct: 402 NSILVGLTQNACPSEALNIFSQMNKLDLKMDRFSFASVISACACRSSLELGEQVFGKAIT 461
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L +D ++ +LVD Y KCG + R VFD M + VS +M+ GYA
Sbjct: 462 I-GLESDQIISTSLVDFYCKCGFVEIGRKVFDGMVKTDEVSWNTMLMGYAT--------- 511
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
NG EAL LF + V P+ TF +L+AC +
Sbjct: 512 ----------------------NGYGIEALTLFCEMTYGGVWPSAITFTGVLSACDHSGL 549
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVS 459
++ GR H +KH G E + ++D++ + G E+ + E M + D
Sbjct: 550 VEEGRNLF-HTMKHSYNINPGIEH----FSCMVDLFARAGYFEEAMDLIEEMPFQADANM 604
Query: 460 WNAMIVGCAQNGYGT 474
W +++ GC +G T
Sbjct: 605 WLSVLRGCIAHGNKT 619
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 69/320 (21%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L +V S + +EG Q+H ++ L + + + N L+ +Y++C L +A +FD M
Sbjct: 3 LHGLVRTLQSWSTLREGRQLHVAFLKTGILNSSVAVANRLLQLYSRCRNLQDASHLFDEM 62
Query: 315 PIRNVVSETSM-------------------------------VSGYAKASSVKSARLMFT 343
P N S ++ VS +AK+ ++ A +F
Sbjct: 63 PQTNSFSWNTLVQAHLNSGHTHSALHLFNAMPHKTHFSWNMVVSAFAKSGHLQLAHSLFN 122
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFR---LLKRESVCPTHYTFGNLLNACANLAD 400
M +N + WN++I Y+++G +AL LF+ L + V + L ACA+
Sbjct: 123 AMPSKNHLVWNSIIHSYSRHGHPGKALFLFKSMNLDPSQIVYRDAFVLATALGACADSLA 182
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI------------ 448
L G+Q H V G+ G E D + +SLI++Y KCG ++ RI
Sbjct: 183 LNCGKQVHARVFVDGM----GLELDRVLCSSLINLYGKCGDLDSAARIVSFVRDVDEFSL 238
Query: 449 -------------------FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
F++ V+ V WN++I G NG EA+ LF ML G +
Sbjct: 239 SALISGYANAGRMREARSVFDSKVDPCAVLWNSIISGYVSNGEEVEAVNLFSAMLRNGVQ 298
Query: 490 PDHVTMIGVLCACSHAGLVE 509
D + +L A S +VE
Sbjct: 299 GDASAVANILSAASGLLVVE 318
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/692 (33%), Positives = 371/692 (53%), Gaps = 55/692 (7%)
Query: 42 HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFI 101
H + IKS S IF N+LI +Y+ G L A K+FD+M + NVF+WN+II +K +
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 102 DDASRLFASMPERDQCSWNSMVSGFAQHDRF-SEALGYFVKMHS--ENFALSEYSFGSAL 158
A LF S RD S+NS++S + D + +EAL F +M S + + E + + L
Sbjct: 66 TQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGIDEITLTNML 125
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE---- 214
+ A G Q+H+ + K+ + S+LIDMY KCG A +F E
Sbjct: 126 NLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMVDL 185
Query: 215 -----------------------------RNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
++ VSWN+LI Y QNG +L FV M+
Sbjct: 186 VSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFVEMIE 245
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+GI+ +E TLASV++AC++L K G +HA +++ N + + +VD Y+KCG +
Sbjct: 246 NGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFI-SSGVVDFYSKCGNIR 304
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A V+ ++ I++ + S+++ Y+ ++ A+ +F +LERN V W AL +GY ++ +
Sbjct: 305 YAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYVKSQQ 364
Query: 366 NEEALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
E LFR + +E++ P ++L ACA ADL LG+Q H ++++ +RF +
Sbjct: 365 CEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILR--MRF----KV 418
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFE--TMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D + +SL+DMY KCG+V ++F T +RD + +N +I G A +G+ +A+ LF++
Sbjct: 419 DKKLLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQE 478
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML KPD VT + +L AC H GLVE G ++F SM + + + P HY CMVD+ GRA
Sbjct: 479 MLNKSVKPDAVTFVALLSACRHRGLVELGEQFFMSM-EHYNVLPEIYHYACMVDMYGRAN 537
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L++A + +P++ DA IWG+ L AC++ + L + ++LL++E N YV L+N
Sbjct: 538 QLEKAVEFMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLAN 597
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
YA G+W E+ R+RK MR K GCSWI + ++VF D+ H + +Y L
Sbjct: 598 AYAAKGKWDEMGRIRKKMRGHEAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTLTC 657
Query: 663 LTREMKRVGYVPNASDDEAYEEQNGSNSTSDC 694
L ++ Y+ + YE Q S DC
Sbjct: 658 LNGKL----YLSFKEQKQLYEIQ----SDVDC 681
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 234/500 (46%), Gaps = 83/500 (16%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q D +D +L+ + + + +++H+ ++K+ F + LID+Y+KCG
Sbjct: 108 QSARDTIGIDEITLTNMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCG 167
Query: 69 CLYGARKVF---DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE-RDQCSWNSMVS 124
C A +F D+M ++ + N+++ + G +D A +F PE +D SWN++++
Sbjct: 168 CFQEACNLFGSCDEMV--DLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIA 225
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G++Q+ ++L +FV+M +E++ S L+AC+ K+G VHA + K YSS
Sbjct: 226 GYSQNGYMEKSLTFFVEMIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSS 285
Query: 185 DVYMGSALIDMYGKCGRV-------------------------------SCARRVFDGMR 213
+ ++ S ++D Y KCG + + A+R+FD +
Sbjct: 286 NQFISSGVVDFYSKCGNIRYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLL 345
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGL 272
ERN V W +L + Y ++ ++F + PD + + S++ ACA A G
Sbjct: 346 ERNSVVWTALCSGYVKSQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGK 405
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
QIHA ++R + + D L ++LVDMY+KCG + A +F +V+++
Sbjct: 406 QIHAYILRM-RFKVDKKLLSSLVDMYSKCGNVAYAEKLF------RLVTDS--------- 449
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+R+ + +N +IAGY +G +A+ LF+ + +SV P TF LL
Sbjct: 450 --------------DRDAILYNVIIAGYAHHGFENKAIELFQEMLNKSVKPDAVTFVALL 495
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEE----SDIFVGNSLIDMYMKCGSVEDGCRI 448
+AC + ++LG Q F+S E +I+ ++DMY + +E
Sbjct: 496 SACRHRGLVELGEQF----------FMSMEHYNVLPEIYHYACMVDMYGRANQLEKAVEF 545
Query: 449 FETM-VERDWVSWNAMIVGC 467
+ ++ D W A + C
Sbjct: 546 MRKIPIKIDATIWGAFLNAC 565
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 310/505 (61%), Gaps = 11/505 (2%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+HA L + + + L Y GR+ C+ VF+ E N+ S++++I + Q+
Sbjct: 65 QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
A + +M++ G+EP+ T +SV+ +C+ + G +H + ++ L +DL +
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKL-GLGSDLYVR 179
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
LVD+YA+ G + AR +FD+MP R++VS T+M++ Y+K + AR +F M ER+VV
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WN +I GY Q+G E+L LFR + P T +L+AC L L+ GR H+++
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
G++ ++ VG +LIDMY KCGS+ED +F+ + ++D V+WN+MIVG A +G
Sbjct: 300 ENKGIQI------NVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHG 353
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ AL LF++M G KP +T IG+L AC H GLVEEGR +F M ++G+ P +HY
Sbjct: 354 FSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHY 413
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMV+LLGRAG L+EA L++ M + D V+WG+LL C++H NI LGE +AK L++ +
Sbjct: 414 GCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKL 473
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
+NSG YVLLSNMYA G W V ++R LM++ G+ K+ GCS IE+ V+ F+ +++HP
Sbjct: 474 ANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHP 533
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNA 676
+KEIY++L + +K GY P
Sbjct: 534 KSKEIYVMLNEINSWLKARGYTPQT 558
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 163/297 (54%), Gaps = 2/297 (0%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P A S L+S S+ + +H + IK S+++++ L+DVYA+ G + AR++FDKM
Sbjct: 143 PNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKM 202
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+++ + +++T K G +D A LF M ERD WN M+ G+AQ +E+L F
Sbjct: 203 PERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFR 262
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M +E + + LSAC + G +H+ + +V++G+ALIDMY KCG
Sbjct: 263 RMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCG 322
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR VFD +R++++V+WNS+I Y +G + AL++F M +G +P ++T ++S
Sbjct: 323 SLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILS 382
Query: 261 ACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC +EG RLMR + + + +V++ + G L EA + M I
Sbjct: 383 ACGHGGLVEEGRSFF-RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTI 438
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 207/429 (48%), Gaps = 83/429 (19%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F + FA L+D +SKSV+ ++HA +++ + +L YA G L +
Sbjct: 44 FQEVERFASLID---KSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVF 100
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF+ NVF++++II ++ SRLF DR A
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQ-------SRLF---------------------DR---A 129
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
GY+ +M S + ++F S L +C+ + G +H K SD+Y+ + L+D+
Sbjct: 130 FGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 196 YGKCGRVSCARRVFD-------------------------------GMRERNIVSWNSLI 224
Y + G V CAR++FD GM+ER++V WN +I
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G +++L++F RM+ + P+EVT+ +V+SAC L A + G IH+ + + +
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHS-YIENKGI 304
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ ++ +G AL+DMY+KCG L +AR VFDR+ ++VV+ SM+ GYA + A +F +
Sbjct: 305 QINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEE 364
Query: 345 MLER----NVVSWNALIAGYTQNGENEEALGLFRLLK-RESVCPTHYTFGNLLNACANLA 399
M E +++ +++ G EE FRL++ + + P +G ++N
Sbjct: 365 MTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNL----- 419
Query: 400 DLQLGRQAH 408
LGR H
Sbjct: 420 ---LGRAGH 425
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/658 (34%), Positives = 353/658 (53%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL C V ++H +I+S F S+ + N +I +Y+KCG L+
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF------ 330
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA ++F MP+ D +WN +++G+ Q+ EA+
Sbjct: 331 -------------------------DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M + L +F S L + S K +VH+ + + DVY+ SAL+D+Y
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYF 425
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V A + F ++ ++I+ Y NG +AL +F ++ G+ P+ +T+AS
Sbjct: 426 KGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMAS 485
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA+LA+ K G ++H +++ + L N +G+++ MYAK G+L+
Sbjct: 486 VLPACAALASLKLGKELHCDILK-KGLENVCQVGSSITYMYAKSGRLD------------ 532
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
A F +M ++ V WN +I ++QNG+ E A+ LFR +
Sbjct: 533 -------------------LAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG 573
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ L+ACAN L G++ H VV++ SD FV ++LIDMY
Sbjct: 574 TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFI------SDTFVASTLIDMYS 627
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + +F+ M ++ VSWN++I +G E L LF +M+ G +PDHVT +
Sbjct: 628 KCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLV 687
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
++ AC HAGLV+EG YF M++E+G+ +H+ CMVDL GRAG L EA I++MP
Sbjct: 688 IMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFT 747
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA WGSLL AC++H N+ L + +K L+E++P+NSG YVLLSN++A G W V++VR
Sbjct: 748 PDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVR 807
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
LM+++GV K PG SWI++ G ++F D HP + EIYL+LK L E+++ GYVP
Sbjct: 808 SLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/492 (31%), Positives = 253/492 (51%), Gaps = 44/492 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F +S+I G+I DA LF +P RD WN M++G+ ++ F+ ALG F +M
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + SF LS CA + G Q+H L+ +S + SD + + +I MY KCG +
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR++FD M + + V+WN LI Y QNG +A+ +F M+ SG++ D +T AS + +
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVL 390
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ K ++H+ ++R + D+ L +ALVD+Y K G + A F + + +V T
Sbjct: 391 KSGSLKYCKEVHSYIVR-HGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCT 449
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M+S GY NG N EAL LFR L +E + P
Sbjct: 450 AMIS-------------------------------GYVLNGLNVEALNLFRWLIQEGMVP 478
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L ACA LA L+LG++ H ++K GL E+ VG+S+ MY K G ++
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILKKGL------ENVCQVGSSITYMYAKSGRLD 532
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ F M +D V WN MIV +QNG A+ LF++M G K D V++ L AC+
Sbjct: 533 LAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACA 592
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ + G++ + + + + D + + ++D+ + G L A+++ + M + + V
Sbjct: 593 NYPALYYGKELHCFVVRN---SFISDTFVASTLIDMYSKCGKLALARSVFDMMDWK-NEV 648
Query: 562 IWGSLLAACKVH 573
W S++AA H
Sbjct: 649 SWNSIIAAYGNH 660
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 257/555 (46%), Gaps = 78/555 (14%)
Query: 22 FAKLLDSCLRSKSVSD-------TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A L+S R+ SD R++HA+++ + + +R++ +Y C
Sbjct: 72 LAAQLESMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVG 131
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+F ++ +L S+P WN ++ GF+ F
Sbjct: 132 NLFCRL-------------------------QLCYSLP------WNWLIRGFSMLGCFDF 160
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL +F +M N A +Y+F + AC G + + VH L + D+++GS+LI
Sbjct: 161 ALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIK 220
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+Y G + A+ +FD + R+ + WN ++ Y +NG + AL F M S ++P+ V+
Sbjct: 221 LYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVS 280
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
++S CA+ + G+Q+H ++R +D + N ++ MY+KCG L +AR +FD M
Sbjct: 281 FVCLLSVCATRGIVRAGIQLHGLVIR-SGFESDPTVANTIITMYSKCGNLFDARKIFDIM 339
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P + V+ +++G Y QNG +EA+ LF+
Sbjct: 340 PQTDTVTWNGLIAG-------------------------------YVQNGFTDEAVALFK 368
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ V TF + L + L+ ++ H+++V+HG+ F D+++ ++L+D
Sbjct: 369 AMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPF------DVYLKSALVD 422
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
+Y K G VE C+ F+ D AMI G NG EAL LF+ ++ G P+ +T
Sbjct: 423 IYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLT 482
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
M VL AC+ ++ G++ + K+ GL + + + + ++G LD A M
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 555 PMQPDAVIWGSLLAA 569
P++ D+V W ++ +
Sbjct: 542 PVK-DSVCWNLMIVS 555
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 200/434 (46%), Gaps = 69/434 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS FA L S L+S S+ + VH+ I++ ++++++ L+D+Y K G + A K
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + N+++ D +M+SG+ + EAL
Sbjct: 437 FQQ---------NTLV----------------------DVAVCTAMISGYVLNGLNVEAL 465
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + E + + S L ACA K+G ++H + K + +GS++ MY
Sbjct: 466 NLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMY 525
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K GR+ A + F M ++ V WN +I + QNG A+++F +M SG + D V+L+
Sbjct: 526 AKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLS 585
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ +SACA+ A G ++H ++R +D + + L+DMY+KCGKL AR VFD M
Sbjct: 586 ATLSACANYPALYYGKELHCFVVR-NSFISDTFVASTLIDMYSKCGKLALARSVFDMMDW 644
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGL 372
+N VS S+++ Y + +F +M+E + V++ +++ G +E +
Sbjct: 645 KNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYY 704
Query: 373 FRLLKRE-SVC--------------------------------PTHYTFGNLLNACANLA 399
FR + E +C P T+G+LL AC
Sbjct: 705 FRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHG 764
Query: 400 DLQLGRQAHTHVVK 413
+++L + A H+V+
Sbjct: 765 NVELAKLASKHLVE 778
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 309/514 (60%), Gaps = 18/514 (3%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
VHA L + D Y+ + ++ G + + R+F +E NI +N++I N
Sbjct: 28 HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR--CEKLRNDLV 289
+++E++ M G+ PD T ++ ACA L K G+++H +++ CE +D
Sbjct: 88 SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE---SDAF 144
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK----- 344
+ +LV +Y KCG ++ A VFD +P +NV + T+++SGY + A MF +
Sbjct: 145 VNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVF 204
Query: 345 --MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
MLE+++VSW+++I GY NG +EAL LF + E P Y +L ACA L L+
Sbjct: 205 DGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALE 264
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
LG A + ++ FL + +G +LIDMY KCG ++ +F M ++D V WNA
Sbjct: 265 LGNWASNLMDRN--EFLG----NPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNA 318
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
I G A +G+ A GLF +M G +PD T +G+LCAC+HAGLV+EGR+YF+SM +
Sbjct: 319 AISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVF 378
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
L P +HY CMVDLLGRAG LDEA L+++MPM+ +A++WG+LL C++HR+ L E V
Sbjct: 379 TLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGV 438
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
K+L+ +EPSNSG YVLLSN+Y+ +W + ++R +M +RG+ K PG SWIE+ G V+
Sbjct: 439 LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHE 498
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
F+V D HPL+++IY L L +++K GYVP
Sbjct: 499 FLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTT 532
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 161/319 (50%), Gaps = 8/319 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL +C R ++H ++K+ S+ F+ L+ +Y KCG + A KVF
Sbjct: 107 DSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVF 166
Query: 78 DKMSNKNVFTWNSIITGLLKWG-------FIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
D + KNV W +II+G + G A +F M E+D SW+SM+ G+A +
Sbjct: 167 DDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNG 226
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
EAL F KM +E F Y+ L ACA ++G L+ ++ + + +G+
Sbjct: 227 LPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGT 286
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
ALIDMY KCGR+ A VF GMR+++IV WN+ I+ +G A +F +M SGIEP
Sbjct: 287 ALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEP 346
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D T ++ AC EG Q + R L ++ +VD+ + G L+EA +
Sbjct: 347 DGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQL 406
Query: 311 FDRMPIR-NVVSETSMVSG 328
MP+ N + +++ G
Sbjct: 407 VKSMPMEANAIVWGALLGG 425
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 205/442 (46%), Gaps = 76/442 (17%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N ++ +G + + R+F E + +N+M+ G +D F E++ +
Sbjct: 39 DEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHS 98
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E + ++F L ACA +D K+G ++H L+ K+ SD ++ ++L+ +YGKCG
Sbjct: 99 MRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGF 158
Query: 202 VSCA-----------------------------------RR---VFDGMRERNIVSWNSL 223
+ A RR VFDGM E++IVSW+S+
Sbjct: 159 IDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSM 218
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y NG +AL++F +M+ G PD + V+ ACA L A + G + R E
Sbjct: 219 IQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEF 278
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L N VLG AL+DMYAKCG+++ A VF M +++V + +SG A + VK+
Sbjct: 279 LGNP-VLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKA------ 331
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
A GLF +++ + P TF LL AC + +
Sbjct: 332 -------------------------AFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDE 366
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
GRQ + + F E + + ++D+ + G +++ ++ ++M +E + + W A
Sbjct: 367 GRQYFNSMER---VFTLTPEIEHY--GCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGA 421
Query: 463 MIVGCAQNGYGTEALGLFKKML 484
++ GC + G+ K+++
Sbjct: 422 LLGGCRLHRDTQLVEGVLKQLI 443
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 333/574 (58%), Gaps = 8/574 (1%)
Query: 104 ASRLFASM-PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A LF+S+ P + +NS++ ++ + ++ ++ SF L A +
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G ++H K SD ++ + L+DMY CGR++ AR VFD M +R++V+WN+
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y + G +A ++F M S + PDE+ L ++VSAC + I+ L+ +
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+R D L ALV MYA G ++ A F +M +RN+ T+MVSGY+KA + AR++F
Sbjct: 246 -VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIF 304
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ +++V W +I+ Y ++ +EAL +F + + P T ++++AC NL L
Sbjct: 305 DQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLD 364
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
+ H + L+G ES + + N+LI+MY KCG ++ +FE M R+ VSW++
Sbjct: 365 KAKWVHRYT------HLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSS 418
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MI A +G +++L LF +M +P+ VT +GVL CSH+GLVEEG+K F+SM+ E+
Sbjct: 419 MINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 478
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ P +HY CMVDL GRA L EA +IE+MPM P+ VIWGSL++AC+VH + LGE
Sbjct: 479 NITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELA 538
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
AK++L++EP + G VL+SN+YA RW V +R +M K+ V K+ G S I++ G +
Sbjct: 539 AKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHE 598
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
F++ DKRH + EIY L + ++K GYVP+
Sbjct: 599 FLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDG 632
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 234/489 (47%), Gaps = 64/489 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D F +L + + ++ + +H K S+ F++ L+D+YA CG + AR V
Sbjct: 112 FDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNV 171
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVS--GFAQHD 130
FD+MS ++V TWN++I ++G +D+A +LF M + D+ ++VS G +
Sbjct: 172 FDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 231
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R++ A+ F+ + + + A AG +D M + ++++ +
Sbjct: 232 RYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAME------FFRKMSVRNLFVST 285
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
A++ Y K GR+ AR +FD +++V W ++I+ Y ++ +AL VF M SGI+P
Sbjct: 286 AMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKP 345
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D VT+ SV+SAC +L + +H R L + L + NAL++MYAKCG L+ AR V
Sbjct: 346 DVVTMLSVISACVNLGTLDKAKWVH-RYTHLNGLESVLPIDNALINMYAKCGGLDAARDV 404
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F++MP RNVVS +SM++ +A +GE ++L
Sbjct: 405 FEKMPTRNVVSWSSMINAFA-------------------------------MHGEASDSL 433
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF +K+E+V P TF +L C +H+ +V+ G + + + +
Sbjct: 434 SLFAQMKQENVEPNEVTFVGVLYGC-----------SHSGLVEEGKKIFASMTDEYNITP 482
Query: 431 S------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
++D++ + + + + E+M + + V W +++ C +G LG
Sbjct: 483 KIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSAC--RVHGELELGELAAK 540
Query: 484 LLCGEKPDH 492
+ +PDH
Sbjct: 541 RILKLEPDH 549
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 331/601 (55%), Gaps = 41/601 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I G I +A LF MPERD +W M++G+ + + A F +M +E
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELD 106
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-RVSCARR 207
+ ++ S L AC G G VH L K +Y+ +AL+DMY C + A
Sbjct: 107 PNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACM 166
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF G+ +N VSW +LI Y L VF +M+ +E + + + V AC S+ +
Sbjct: 167 VFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGS 226
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G Q+HA + + ++L + N+++DMY +C +EA F M R++++ ++++
Sbjct: 227 HTFGEQLHAAVTK-HGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIA 285
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
GY +++ E+L +F +++ E P +T
Sbjct: 286 GYERSNPT--------------------------------ESLYVFSMMESEGFSPNCFT 313
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +++ ACA LA L G+Q H +++ GL + ++ + N+LIDMY KCG++ D +
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGL------DGNLALSNALIDMYSKCGNIADSHQ 367
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F M RD VSW AM++G +GYG EA+ LF KM+ G +PD V + +L ACSHAGL
Sbjct: 368 VFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGL 427
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG +YF M ++ ++P ++ Y C+VDLLGRAG ++EA LIE+MP +PD +WG L
Sbjct: 428 VDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFL 487
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
ACK H LG+ A ++L++ P +G YV+LSN+YA G+WGE R+RKLM++ G K
Sbjct: 488 GACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKK 547
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQNG 687
+ G SW+E+ HV F+V D+ + IY VL+ L MK GYVP+ D Y+ ++G
Sbjct: 548 ETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPDL-DCLIYDLEDG 606
Query: 688 S 688
+
Sbjct: 607 T 607
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 218/465 (46%), Gaps = 83/465 (17%)
Query: 17 LDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
LD + F + +L +C K +S R VH IK I++ N L+D+YA C C+
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATC-CVS--- 160
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+DDA +F + +++ SW ++++G+ D
Sbjct: 161 --------------------------MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYG 194
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L F +M E L+ +SF A+ AC G Q+HA ++K + S++ + ++++D
Sbjct: 195 GLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILD 254
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY +C S A R F M +R++++WN+LI YE++ P +++L VF M + G P+ T
Sbjct: 255 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNP-TESLYVFSMMESEGFSPNCFT 313
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S+++ACA+LA G QIH R++R L +L L NAL+DMY+KCG + ++ VF M
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIR-RGLDGNLALSNALIDMYSKCGNIADSHQVFGGM 372
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R++VS T+M+ GY +G EEA+ LF
Sbjct: 373 SRRDLVSWTAMMIGYG-------------------------------THGYGEEAVELFD 401
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS---GE---ESDIFV 428
+ R + P F +L+AC +H +V GLR+ G+ D +
Sbjct: 402 KMVRSGIRPDRVVFMAILSAC-----------SHAGLVDEGLRYFKLMVGDYNISPDQEI 450
Query: 429 GNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGY 472
++D+ + G VE+ + E+M + D W + C + +
Sbjct: 451 YGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTF 495
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 32/313 (10%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R +Q++ + L+ F+ + +C S + ++HA + K F S + + N ++D+Y
Sbjct: 197 RVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMY 256
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
+C C +A+R F M +RD +WN++++
Sbjct: 257 CRCSCF-------------------------------SEANRYFYEMNQRDLITWNTLIA 285
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G+ + + +E+L F M SE F+ + ++F S ++ACA G Q+H + +
Sbjct: 286 GYERSNP-TESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDG 344
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
++ + +ALIDMY KCG ++ + +VF GM R++VSW +++ Y +G +A+E+F +M+
Sbjct: 345 NLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMV 404
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
SGI PD V +++SAC+ EGL+ ++ + D + +VD+ + GK+
Sbjct: 405 RSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKV 464
Query: 305 NEARCVFDRMPIR 317
EA + + MP +
Sbjct: 465 EEAYELIESMPFK 477
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+P V T+++ Y + AR +F +M ER+VV+W +IAGYT + A +F
Sbjct: 38 IPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVF 97
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ E + P +T ++L AC + L GR H +KHGL + I+V N+L+
Sbjct: 98 CEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGL------DGFIYVDNALM 151
Query: 434 DMYMKCG-SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
DMY C S++D C +F + ++ VSW +I G G L +F++MLL + +
Sbjct: 152 DMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNP 211
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+ + AC+ G G + ++++K HG ++D+ R C EA
Sbjct: 212 FSFSIAVRACTSIGSHTFGEQLHAAVTK-HGFESNLPVMNSILDMYCRCSCFSEANRYFY 270
Query: 553 AMPMQPDAVIWGSLLAA 569
M Q D + W +L+A
Sbjct: 271 EMN-QRDLITWNTLIAG 286
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F ++ +C ++ +++H RII+ + + N LID+Y+KCG + + +VF MS
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 373
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALG 137
+++ +W +++ G G+ ++A LF M D+ + +++S + E L
Sbjct: 374 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433
Query: 138 YFVKMHSE-NFALSEYSFGSA--LSACAGSVDFKMGTQVHALLSKSRYSSD-----VYMG 189
YF M + N + + +G L AG V+ + + L+ + D ++G
Sbjct: 434 YFKLMVGDYNISPDQEIYGCVVDLLGRAGKVE-----EAYELIESMPFKPDECVWGPFLG 488
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+ + G+++ A R+ D +R ++ L Y +G
Sbjct: 489 ACKAHTFPNLGKLA-AHRILD-LRPHMAGTYVMLSNIYAADG 528
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/689 (33%), Positives = 357/689 (51%), Gaps = 98/689 (14%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P LL +C K++ R +HA++IK+ + + +RL++ C+ FD +
Sbjct: 4 PSLSLLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEF-----CILSPN--FDGL 53
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
A +F ++ E + WN+M G A A+ +V
Sbjct: 54 PY---------------------AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYV 92
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + Y+F L +CA K G Q+H + K Y D+Y+ ++LI MY K G
Sbjct: 93 CMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNG 152
Query: 201 RVSCARRVFDGMRERNIVS-------------------------------WNSLITCYEQ 229
R A +VFDG R++VS WN++I+ Y
Sbjct: 153 RWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYAD 212
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL++F MM + ++PDE T+ +VVSACA + + G Q+H+ + L ++L
Sbjct: 213 TGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHS-WIDDHGLGSNLK 271
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ NAL+D+Y+KCG+ V++A +F + ++
Sbjct: 272 IVNALIDLYSKCGE-------------------------------VETACGLFQGLSNKD 300
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V+SWN +I GYT +EAL LF+ + R P T ++L ACA L + GR H
Sbjct: 301 VISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHV 360
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++ K + G + + SLIDMY KCG +E ++F +M R + NAMI G A
Sbjct: 361 YIDKR----IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G A +F +M G +PD +T +G+L ACSH+G+++ GR+ F SM++ + + P +
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLE 476
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CM+DLLG G EA+ +I M M+PD VIW SLL ACK+H N+ LGE A+KL++I
Sbjct: 477 HYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKI 536
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
EP N G YVLLSN+YA GRW EV +R L+ +G+ K PGCS IEI V+ F++ DK
Sbjct: 537 EPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 596
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNASD 678
HP N+EIY +L+ + ++ G+VP+ S+
Sbjct: 597 HPRNREIYGMLEEMEVLLEEAGFVPDTSE 625
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/664 (34%), Positives = 348/664 (52%), Gaps = 82/664 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL + + S+ ++H + K F S+ + N LID+YAKCG L
Sbjct: 220 IADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGEL----------- 268
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
D A +F M +R+ SW +++ GF QH + L +
Sbjct: 269 --------------------DMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGE 308
Query: 142 MHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + + A +EY+ ++L AC + D G +H L ++ Y + S+L+ +Y K G
Sbjct: 309 MRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGG 368
Query: 201 RVSCARRVFD--GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI------EPDE 252
R+ ARRVFD G+ R + +WN++I+ Y G DAL VF M +PDE
Sbjct: 369 RIGDARRVFDCAGL-GRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDE 427
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T AS++ AC L A +EG Q+HA + ++ +L ALVDMY KCG
Sbjct: 428 FTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCG--------- 478
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
R+P+ A +F ++ +N + W ++ G+ Q G+ EAL
Sbjct: 479 -RLPV---------------------AMQVFERLERKNAIQWTTVVVGHAQEGQVMEALE 516
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LFR R + +++ A+ A ++ GRQ H + VK S +D+ GNS
Sbjct: 517 LFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVK------SPAGTDVSAGNS 570
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
++DMY+KCG ++ R+F + R+ VSW MI G ++G G EA+ +F++M G +PD
Sbjct: 571 IVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPD 630
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT + +L ACSHAGLV+E R+YFS + ++ + P +HY CMVDLLGRAG L EA+ LI
Sbjct: 631 EVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLI 690
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
MPM+P +W +LL+AC+VH+++ +G LL I+ N YV LSN++AE G W
Sbjct: 691 RTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWR 750
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM--VKDKRHPLNKEIYLVLKML-TREMK 668
E +VR MR+RG+ KQ GCSW+EI V+ F ++ HP +I VL+ + TR +
Sbjct: 751 ECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVRE 810
Query: 669 RVGY 672
++GY
Sbjct: 811 QLGY 814
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/752 (31%), Positives = 374/752 (49%), Gaps = 114/752 (15%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQN 58
+ T SVK D + L P LL C+ ++ + + VH ++KS+F++ + + N
Sbjct: 51 IKTPNSVKVDKTD-SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLN 109
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
+ Y+KC ID A RLF M +R+ S
Sbjct: 110 HVAHAYSKCSD-------------------------------IDAACRLFDQMSQRNTFS 138
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
W +++G A++ F + +F +M S+ ++++ L C G ++G VHA +
Sbjct: 139 WTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIV 198
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
++S ++ +AL++MY K + + +VF+ M E N+VSWN++IT + N DA +
Sbjct: 199 IRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F+RMM G+ PD T V A L + ++ + N LV G AL+DM
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV-GTALIDMN 317
Query: 299 AKCGKLNEARCVFDRMPI--RNVVSETSMVSGYAKASSVKSARLMFTKM----------- 345
+KCG L EAR +F+ I R +M+SGY ++ + A +F KM
Sbjct: 318 SKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYT 377
Query: 346 ----------------------------LERNVVSW-NALIAGYTQNGENEEALGLF-RL 375
LE N VS NA+ Y + G E+ +F R+
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 376 LKRESVCPT------------------------------HYTFGNLLNACANLADLQLGR 405
R+ + T +TF ++L +CANL L+ G+
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H + K GL + D + ++L+DMY KCG + D ++F + D VSW A+I
Sbjct: 498 QVHGIICKVGL------DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIA 551
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G AQ+G +AL LF++M+ G +P+ VT + VL ACSH GLVEEG +YF M K +GL
Sbjct: 552 GHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLV 611
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY C+VDLL R G L++A I MP++P+ ++W +LL AC+VH N+ LGE A+K
Sbjct: 612 PEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQK 671
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+L + NS YVLLSN Y E G + + + +R +M+++GV K+PGCSWI + G ++ F
Sbjct: 672 ILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYA 731
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
D++HP +IY L+ L ++ + VP+ S
Sbjct: 732 GDQQHPEKDKIYAKLEELKLKLISLDDVPDLS 763
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 351/663 (52%), Gaps = 79/663 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + R VH ++ +++F+ L+DVYAKC A VF +M
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM- 190
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P RD +WN+M++G+A H ++S+ + +
Sbjct: 191 ------------------------------PARDVVAWNAMLAGYALHGKYSDTIACLLL 220
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL----LSKSRYSSDVYMGSALIDMYG 197
M ++ A + + + L A G VHA S + V +G+AL+DMY
Sbjct: 221 MQDDH-APNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYA 279
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI---EPDEVT 254
KCG + A RVF+ M RN V+W++L+ + G +A +F M+A G+ P V
Sbjct: 280 KCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSV- 338
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AS + ACA+L+ G Q+HA L + L DL GN+L+ MYA
Sbjct: 339 -ASALRACANLSDLCLGKQLHALLAK-SGLHTDLTAGNSLLSMYA--------------- 381
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
KA + A +F +M+ ++ VS++AL++GY QNG+ +EA +FR
Sbjct: 382 ----------------KAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFR 425
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ +V P T +L+ AC++LA LQ G+ H V+ G+ S+ + N+LID
Sbjct: 426 KMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGI------ASETSICNALID 479
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG ++ +IF+ M RD VSWN MI G +G G EA LF M +PD VT
Sbjct: 480 MYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVT 539
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I ++ ACSH+GLV EG+++F M+ ++G+ P +HY MVDLL R G LDEA I+ M
Sbjct: 540 FICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGM 599
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P++ D +WG+LL AC+VH+NI LG+ V+ + ++ P +G +VLLSN+++ GR+ E
Sbjct: 600 PLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAA 659
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
VR + +++G K PGCSWIEI G ++ F+ D+ H + EIY L + ++ ++GY
Sbjct: 660 EVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRA 719
Query: 675 NAS 677
+ S
Sbjct: 720 DTS 722
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 168/373 (45%), Gaps = 42/373 (11%)
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG +S AR +FD + I +N+LI Y GPA +P+ T V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ AC++L + +H R L DL + ALVD+YAKC A VF RMP R+
Sbjct: 136 LKACSALLDLRSARAVHCHAAR-AGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
VV+ WNA++AGY +G+ + + LL +
Sbjct: 195 VVA-------------------------------WNAMLAGYALHGKYSDTIACL-LLMQ 222
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T LL A L GR H + V+ L + + VG +L+DMY K
Sbjct: 223 DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRAC--SLHDHKDGVLVGTALLDMYAK 280
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML---LCGEKPDHVTM 495
CG + R+FE M R+ V+W+A++ G G EA LFK ML LC P V
Sbjct: 281 CGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVA- 339
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
L AC++ + G++ + ++K GL ++ + +AG +D+A TL + M
Sbjct: 340 -SALRACANLSDLCLGKQLHALLAKS-GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397
Query: 556 MQPDAVIWGSLLA 568
++ D V + +L++
Sbjct: 398 VK-DTVSYSALVS 409
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 31/304 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L FL + A L +C + +++HA + KS +++ N L+ +YAK G + A
Sbjct: 330 LCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQA 389
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FD+M K+ +++++++G ++ G D+A R+F
Sbjct: 390 TTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFR------------------------ 425
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
KM + N + S + AC+ + G H + +S+ + +ALI
Sbjct: 426 -------KMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALI 478
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCGR+ +R++FD M R+IVSWN++I Y +G +A +F+ M EPD+V
Sbjct: 479 DMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDV 538
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T ++SAC+ EG + + + + +VD+ A+ G L+EA
Sbjct: 539 TFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQG 598
Query: 314 MPIR 317
MP++
Sbjct: 599 MPLK 602
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/648 (35%), Positives = 350/648 (54%), Gaps = 82/648 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID-VYAKCGCLYGARKVFD 78
+P LL +SK+ S ++HA++I + S+ F +RL+D V +K + A VF
Sbjct: 12 NPLLSLLQ---KSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFA 68
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++ N F N+++ + +S PER AL +
Sbjct: 69 QIHQPNSFICNTMVKCYTE-----------SSTPER--------------------ALRF 97
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M + Y++ L AC G V K + DV++ + LI MY +
Sbjct: 98 YAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCR 157
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG AR VFDG E+++VSWNS++ Y G +A +F M P+
Sbjct: 158 CGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEM------PER------ 205
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK-CGKLNEARCVFDRMPIR 317
D+V + ++D Y K G++N AR FD MP R
Sbjct: 206 ----------------------------DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTR 237
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS SM+ GYAK ++ AR +F KML++NV+SW+ +I GY Q+ +++EAL LFR +
Sbjct: 238 DLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQML 297
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P + ++AC+ L L GR H ++ ++ + DI V +L+DMY+
Sbjct: 298 CQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLL------DIVVQTALVDMYL 351
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS ++ RIF +M ER+ VSWN MIVG NG+G EAL F +M + D + +G
Sbjct: 352 KCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLG 411
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHA LV EG F+ M + L P +HY C+VDLLGRAG LD+ + +I++MPM+
Sbjct: 412 VLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMK 471
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+A +WGSLL AC++H+N+ L E V ++L E++ +SG YVL+SN+YA++G W ++R+R
Sbjct: 472 PNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIR 531
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
KLM++R + K G S IE+ G+V F+ +K H L +EI LV+ L +
Sbjct: 532 KLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAK 579
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 210/458 (45%), Gaps = 90/458 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C + + V +K F ++F+ N LI +Y +CG AR VF
Sbjct: 109 DNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVF 168
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S K++ +WNS++ G + G +++A +F MPERD SW+ M+ G+ +
Sbjct: 169 DGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGK--------- 219
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMY 196
KMG A + S + D+ +++ID Y
Sbjct: 220 ------------------------------KMGEVNRARVFFDSMPTRDLVSWNSMIDGY 249
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + AR +FD M ++N++SW+ +I Y Q+ + +AL +F +M+ GI+PD V++
Sbjct: 250 AKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
VSAC+ L A +G IH + R ++ D+V+ ALVDMY KCG +EAR +F+ MP
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKR-NRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPE 368
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RNVV SWN +I G NG +EAL F +
Sbjct: 369 RNVV-------------------------------SWNVMIVGLGMNGFGKEALECFTQM 397
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE------ESDIFVGN 430
+ E + F +L AC +H ++V GL + E +
Sbjct: 398 EMERIPMDDLLFLGVLMAC-----------SHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
L+D+ + G ++ I ++M ++ + W ++++ C
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLAC 484
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 26/296 (8%)
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY-----AKASSVKSARLMF 342
L L N L+ + K ++ + ++ N++S+T S +K +V A L+F
Sbjct: 8 LQLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVF 67
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
++ + N N ++ YT++ E AL + ++R+ + +YT+ +L AC + L
Sbjct: 68 AQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLL 127
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
G VK G D+FV N LI MY +CG +F+ E+D VSWN+
Sbjct: 128 EGGLVQGEAVKRGF------GGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNS 181
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM-IGVLCACSHAGLVEEGRKYFSSMSKE 521
M+ G G A +F +M + D V+ I + G V R +F SM
Sbjct: 182 MLGGYVWCGEMENAQNMFDEM----PERDVVSWSIMIDGYGKKMGEVNRARVFFDSM--- 234
Query: 522 HGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
P +D + M+D + G ++ A+ + + M +Q + + W ++ HR+
Sbjct: 235 ----PTRDLVSWNSMIDGYAKVGEMEVAREIFDKM-LQKNVISWSIMIDGYAQHRD 285
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/626 (35%), Positives = 329/626 (52%), Gaps = 71/626 (11%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F LL+ C S+ D R+HA ++ + + + +LI
Sbjct: 29 SRSFNYLLNCC---SSLPDLSRIHALVVTNGCGQNLLLSTKLI----------------- 68
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
IT +D A ++F MP+RD WN+++ G+A EAL
Sbjct: 69 -------------ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALAL 115
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ MH Y+F + +CA + G +VH + K + SDV++ S+L+ MY +
Sbjct: 116 YSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQ 175
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G VF M RNIVSW ++I Y QN + L VF M+ SG +P+ VTL SV
Sbjct: 176 SGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSV 235
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACA L G IH ++ + D+ L NAL+ +Y KCG
Sbjct: 236 LPACAGLEFLNLGKLIHGYGIKL-GVDPDVSLTNALIALYGKCG---------------- 278
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V++AR +F M+ +N+VSWNA+IA Y QN A+ LFR ++
Sbjct: 279 ---------------NVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQA 323
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E V + T ++++ACA+L L GR H V + GL E ++ + N+LIDMY K
Sbjct: 324 EKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGL------EINVSITNALIDMYAK 377
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG+++ +FE + R VSW +MI CA +G+G +AL LF +M G KP+ T V
Sbjct: 378 CGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAV 437
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
AC H+GLVEEGRK+F SM +++ + P +H CMVDLLGRAG L EA I+ MP++P
Sbjct: 438 FTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEP 497
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D +WG+LL +C++H N+ L E VA+KL ++P YVL+SN+YAE GRW + R+RK
Sbjct: 498 DVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRK 557
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFM 644
LM +R + K PG S +E+ + F+
Sbjct: 558 LMEERELKKIPGHSLVEVNRRFHTFL 583
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/453 (30%), Positives = 222/453 (49%), Gaps = 69/453 (15%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D+ F ++ SC ++ + + VH I+K F S++F+Q+ L+ +Y++ G G
Sbjct: 125 FPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMEL 184
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF +M +N+ +W ++I +G+ Q+ F E
Sbjct: 185 VFGEMVVRNIVSWTAVI-------------------------------AGYVQNRYFKEG 213
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
LG F +M + + S L ACAG +G +H K DV + +ALI +
Sbjct: 214 LGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIAL 273
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
YGKCG V AR +FDGM +N+VSWN++I YEQN ++A+++F RM A ++ D +T+
Sbjct: 274 YGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITM 333
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
SV+SACASL A G +H L++ + L ++ + NAL+DMYAKCG ++ AR VF+R+P
Sbjct: 334 VSVISACASLGALNTGRWMH-ELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLP 392
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R+VVS TSM+ A +G E+AL LF
Sbjct: 393 CRSVVSWTSMIGACA-------------------------------SHGHGEDALKLFSR 421
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+K E V P +TF + AC + ++ GR+ H + + G E ++D+
Sbjct: 422 MKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-HFESMMRDYSIMPGVEH----CACMVDL 476
Query: 436 YMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ GS+ + + M VE D W A++ C
Sbjct: 477 LGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSC 509
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 37/384 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++VG ++ +L +C + ++ + +H IK ++ + N LI +Y KC
Sbjct: 218 REMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKC 277
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + AR +FD M +N+ +W N+M++ +
Sbjct: 278 GNVETARSLFDGMVVQNLVSW-------------------------------NAMIAAYE 306
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q++ + A+ F +M +E + S +SACA G +H L+ + +V
Sbjct: 307 QNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVS 366
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +ALIDMY KCG + AR VF+ + R++VSW S+I +G DAL++F RM G
Sbjct: 367 ITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEG 426
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++P+ T A+V +AC +EG + +MR + + +VD+ + G L EA
Sbjct: 427 VKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEA 486
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKA-SSVKSARLMFTK--MLERNVVSWNALIAG-YTQN 363
D+MP+ VS + G + S+++ A L+ K +L+ V++ L++ Y +
Sbjct: 487 YEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEA 546
Query: 364 GENEEALGLFRLLKRESV--CPTH 385
G E+A L +L++ + P H
Sbjct: 547 GRWEDAARLRKLMEERELKKIPGH 570
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/599 (36%), Positives = 330/599 (55%), Gaps = 45/599 (7%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEYSFGSALSACAGS 164
RL P C +N ++ +AL FV+M + +++ AL +C+
Sbjct: 74 RLGPRPPLSTPC-YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRM 132
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
+G + A K +D ++ S+LI MY C V+ A+ +FD + E +V WN++I
Sbjct: 133 CTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAII 192
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
T Y +NG + +E+F M+ G+ DE+TL SVV+AC + K G +
Sbjct: 193 TAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWV---------- 242
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
A V ++ +RN T+++ YAK + AR +F
Sbjct: 243 ----------------------AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDG 280
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M R+VV+W+A+I+GYTQ + EAL LF ++ V P T ++L+ACA L L+ G
Sbjct: 281 MQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETG 340
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ H+++ + L I +G +L+D Y KCG ++D FE+M ++ +W A+I
Sbjct: 341 KWVHSYIRRKRLSL------TIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALI 394
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A NG G EAL LF M +P VT IGVL ACSH+ LVEEGR++F SM++++G+
Sbjct: 395 KGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGI 454
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
P +HY C+VDLLGRAG +DEA I MP++P+AVIW +LL++C VH+N+ +GE K
Sbjct: 455 KPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALK 514
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
+++ + PS+SG Y+LLSN+YA +G+W +RK M+ RG+ K PGCS IE+ G V F
Sbjct: 515 QIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFF 574
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
+D HP KEIY ++ + +K GY+PN +D DE +E + S+ + I F
Sbjct: 575 AEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAF 633
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 218/470 (46%), Gaps = 84/470 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A L SC R ++ R + A +K ++ F+ + LI +YA C + A+ +F
Sbjct: 118 DQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + V W N++++ + ++ + E +
Sbjct: 178 DAVEENGVVMW-------------------------------NAIITAYMKNGNWMEVVE 206
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M A E + S ++AC D K+G V + + + + +ALIDMY
Sbjct: 207 MFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYA 266
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + ARR+FDGM+ R++V+W+++I+ Y Q +AL +F M + +EP++VT+ S
Sbjct: 267 KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVS 326
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SACA L A + G +H+ + R ++L ++LG ALVD YAKCG +++A F+ MP++
Sbjct: 327 VLSACAVLGALETGKWVHSYIRR-KRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N + T+++ G A NG EAL LF ++
Sbjct: 386 NSWTWTALIKGMA-------------------------------TNGRGREALELFSSMR 414
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------NS 431
+ S+ PT TF +L AC +H+ +V+ G R D +
Sbjct: 415 KASIEPTDVTFIGVLMAC-----------SHSCLVEEGRRHFDSMTQDYGIKPRAEHYGC 463
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG---YGTEAL 477
++D+ + G +++ + TM +E + V W A++ CA + G EAL
Sbjct: 464 VVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/686 (32%), Positives = 356/686 (51%), Gaps = 74/686 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA-SEIFIQNRLIDVYAKCG-CLYGAR 74
L+ A+LL S S+ +++H +K + + + NRL+ +YA+CG + A
Sbjct: 3 LELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAH 62
Query: 75 KVFDKMSNKNVFTWNS-------------------------------IITGLLKWGFIDD 103
+FD+M +N F+WN+ +I+G K G +D
Sbjct: 63 NLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDV 122
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS---EYSFGSALSA 160
A +LF MP R+ +WNSM+ G+A++ EA+G F +++S S + S + A
Sbjct: 123 AKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGA 182
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-------------------- 200
CA + G QVHA + D + S+LI++Y KCG
Sbjct: 183 CADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSL 242
Query: 201 -----------RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
R+S A R+F V WNSLI+ Y N A + M + ++
Sbjct: 243 SALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQ 302
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
D T+ ++SAC+S + Q+H + + L + +++ +A +D Y+KC N+A
Sbjct: 303 VDSSTITVILSACSSTGNAQYAKQMHGYVCKV-GLIDSVIVASAFIDAYSKCRNPNDACK 361
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+F + + V SM++ Y ++ A+ +F M ++++SWN++I G QN EA
Sbjct: 362 LFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEA 421
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L +F + + + ++ ++++ACA ++ L+LG Q + ++G ESD V
Sbjct: 422 LDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAI------ITGLESDQAVS 475
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
SL+D Y KCG +E+G ++F++M++ D VSWN+M++G A NGYG E L LF +M G +
Sbjct: 476 TSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSMLMGYATNGYGLETLTLFNEMKQAGLR 535
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P +T GVL AC H GLVEEGRK+F+ M ++ + P +HY+CMVDL RAGCL EA
Sbjct: 536 PTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALN 595
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
L+E MP + D +W S+L C H + LG+ VA++++++ P +S YV LS ++A G
Sbjct: 596 LVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGD 655
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIE 635
W VRK+M ++ V K PG SW +
Sbjct: 656 WESSALVRKIMTEKQVKKHPGFSWAD 681
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 327/592 (55%), Gaps = 62/592 (10%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY--SFGSALSACAGSVDFKMGTQVHA 175
SW + A +F A+ F++M + S S +AL +CAG + +HA
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 176 LLSKSRYSSDVYMGSALIDM----------------YGKCGRVSCA----RRVFDGMRER 215
L +S +D + +AL+++ G+ G S A R+VFD M ER
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ VSWN+LI ++ +AL + M G PD TL++V+ A A K G+ +H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++ ND+ +G++L+DMYA C +++ + VFD
Sbjct: 194 GYAIK-NGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFS-------------------- 232
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ + V WN+++AGY QNG EEALG+FR + + V P TF +L+ A
Sbjct: 233 -----------DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAF 281
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
NL+ L+LG+Q H ++++ RF +IF+ +SLIDMY KCG+V+ R+F +
Sbjct: 282 GNLSLLRLGKQLHAYLIR--ARF----NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSP 335
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW AMI+G A +G TEA LF++M L KP+H+T + VL ACSHAGLV+ G KYF
Sbjct: 336 DIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYF 395
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+SMS ++G P +H + D LGRAG LDEA I M ++P + +W +LL AC+VH+N
Sbjct: 396 NSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKN 455
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+L E VAKK+ E+EP + G +V+LSNMY+ GRW E ++RK MR +G+ K+P CSWIE
Sbjct: 456 TVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIE 515
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD--DEAYEEQ 685
+ ++VF+ DK HP I L + + +M R GYVPN D + EEQ
Sbjct: 516 VKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQ 567
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 23/369 (6%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I+S ++ F N L+++ C L G F G L+
Sbjct: 71 LHALAIRSGSFADRFTANALLNL---CIKLPGFHHPFGTNGPSG--------EGGLESAA 119
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ ++F M ERD SWN+++ G A+H R EAL +M + F ++ + L
Sbjct: 120 YESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPI 179
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A D K G VH K+ + +DV++GS+LIDMY C ++ + +VFD + + V W
Sbjct: 180 FAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLW 239
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS++ Y QNG +AL +F RM+ +G+ P VT +S++ A +L+ + G Q+HA L+R
Sbjct: 240 NSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIR 299
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +++ + ++L+DMY KCG ++ AR VF+ + ++VS T+M+ GYA A +
Sbjct: 300 A-RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFV 358
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+F +M ++ N +++ A++ + G + F + + Y F L CA
Sbjct: 359 LFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQ------YGFVPSLEHCA 412
Query: 397 NLADLQLGR 405
LAD LGR
Sbjct: 413 ALAD-TLGR 420
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/529 (38%), Positives = 303/529 (57%), Gaps = 44/529 (8%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D + L+ Y G S AR +FD E+N+V +N +I Y N +AL +F M+
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+ PD T V+ AC+ L + GLQ+H +++ L +L +GNALV MY KCG L
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALVAMYGKCGCL 188
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKA-------------------------------- 332
EAR V D+MP R+VVS SMV+GYA++
Sbjct: 189 REARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVV 248
Query: 333 -----SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+V+ MF +M ++N++SWN +IA Y N EA+ LF ++ + P T
Sbjct: 249 CYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+LL AC +L+ L LGR+ H ++ K L + ++ + N+L+DMY KCG +E+
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKGNL------QPNLLLENALLDMYAKCGCLEEARD 362
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M RD VSW +M+ ++G G +A+ LF KML G+ PD + + VL ACSH GL
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+++GR YF M++++G+ P +H+ CMVDL GRAG ++EA + I+ MPM+P+ +WG+LL
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALL 482
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
+AC+VH + +G A L ++ P SG YVLLSN+YA+ G W +V+ VR M+K G+ K
Sbjct: 483 SACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKK 542
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
PG S +E+ G V+ F+ D+ HP K IY L +L +MK +GY+P
Sbjct: 543 VPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 166/349 (47%), Gaps = 38/349 (10%)
Query: 6 SVKQIVGDLAF-LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
S+ Q++ AF D F +L +C ++ +VH I+K + +FI N L+ +Y
Sbjct: 123 SIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMY 182
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA-------------------- 104
KCGCL ARKV D+M ++V +WNS++ G + G DDA
Sbjct: 183 GKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA 242
Query: 105 -----------------SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
+F M +++ SWN M++ + + +EA+ F++M
Sbjct: 243 SLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGM 302
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ S L AC +G ++H + K ++ + +AL+DMY KCG + AR
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARD 362
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VFD MR R++VSW S+++ Y ++G DA+ +F +M+ SG PD + SV+SAC+
Sbjct: 363 VFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGL 422
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+G + + + +VD++ + G++ EA +MP+
Sbjct: 423 LDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPM 471
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 190/407 (46%), Gaps = 54/407 (13%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F E++ +N M+ + ++ + EAL F M S F Y+F L AC+G
Sbjct: 90 ARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSG 149
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+ ++G QVH + K +++++G+AL+ MYGKCG + AR+V D M R++VSWNS+
Sbjct: 150 LDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSM 209
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y Q+G DALE+ M + + D T+AS +S + + IH R K
Sbjct: 210 VAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNMFERMTK 268
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRM----------------PI----------- 316
+L+ N ++ +Y NEA +F +M P
Sbjct: 269 --KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGR 326
Query: 317 ------------RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
N++ E +++ YAK ++ AR +F KM R+VVSW ++++ Y ++G
Sbjct: 327 RLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSG 386
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS---G 421
+ +A+ LF + P F ++L+AC++ L GR H R ++ G
Sbjct: 387 QGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR--------HYFRMMTEQYG 438
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D++ + G VE+ + M +E + W A++ C
Sbjct: 439 IVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 45/216 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A LL +C ++ RR+H I K + ++N L+D+YAKCGCL AR VF
Sbjct: 305 DAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVF 364
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DKM ++V +W S+++ + G DA LFA M + Q
Sbjct: 365 DKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP------------------- 405
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
+F S LSAC+ G +D F+M T+ + ++ + + +
Sbjct: 406 ------------DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF------A 447
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
++D++G+ G V A M E N W +L++
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/688 (34%), Positives = 356/688 (51%), Gaps = 101/688 (14%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ + N I+ K +D A +LF MP+R SWN+M+S +++H RFSEAL MH
Sbjct: 32 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 91
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ LSE +F S LS CA + G +H L+ KS S +GSAL+ Y C +
Sbjct: 92 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 151
Query: 205 ARRVFD-------------------------------GMRERNIVSWNSLITCYEQNGPA 233
ARRVFD M R++V+W +LI+ + +NG
Sbjct: 152 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 211
Query: 234 -SDALEVF-------------------VR-----------------MMASGIEPDEV--- 253
ALE+F VR +M G+E D
Sbjct: 212 CGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 271
Query: 254 -----------------TLASVVSACA-SLAAFKEGLQIHARLMRCEKLRNDL-----VL 290
VV+ C +L + EGL R+ E + N + V
Sbjct: 272 ALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVS 331
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML-ERN 349
N ++ YA G++++++ +F++MP R + S +M+S Y++ + A +F + E++
Sbjct: 332 YNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKD 391
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V+WN++I+GY +G+ EEAL L+ + R S+ T TF L +AC+ L L G+ H
Sbjct: 392 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHA 451
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
H++K ES+++VG SLIDMY KCGS+ + F ++ + +W A+I G A
Sbjct: 452 HLIKTPF------ESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAY 505
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G G+EA+ LF +M+ G P+ T +GVL ACS AGLV EG K F SM + + + P +
Sbjct: 506 HGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLE 565
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY C+VDLLGR+G + EA+ I+ MP++ D V+WG+LL+AC ++ +GE VA+K+
Sbjct: 566 HYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSF 625
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
+P YV+LSN+YA LGRW E + VRK++R V K PGCSWIE+ ++VF ++D+
Sbjct: 626 DPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRS 685
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP IY L+ LT + V + + S
Sbjct: 686 HPYCNMIYATLEHLTANINSVVHFDHVS 713
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 207/390 (53%), Gaps = 22/390 (5%)
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
S++ + I Y K ++ AR++FD M +R +VSWN++I+ Y ++G S+AL + M
Sbjct: 30 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
S ++ E T +SV+S CA L ++G IH +++ +LV G+AL+ YA C +
Sbjct: 90 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELV-GSALLYFYASCFE 148
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ EAR VFD + RN V + M+ GY + + A +F KM R+VV+W LI+G+++N
Sbjct: 149 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 208
Query: 364 GEN-EEALGLFRLLKRE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
G+ +AL +FRL+ R P +TF ++ AC L L +GR H ++K GL
Sbjct: 209 GDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL----- 263
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
E D +G +L++ Y +C +++D R+ + +V + N++I G G +A +F
Sbjct: 264 -EYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFN 322
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT--CMVDLLG 539
M + + V+ ++ + G +++ ++ F M P + ++ M+ +
Sbjct: 323 GM----TEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM-------PCRTIFSSNTMISVYS 371
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R G +D+A L E + D V W S+++
Sbjct: 372 RNGEIDKALELFEETKNEKDPVTWNSMISG 401
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 236/543 (43%), Gaps = 115/543 (21%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S F+ +L C R + + D + +H ++KS S + + L+ YA C + AR+V
Sbjct: 96 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH-DRFSEA 135
FD + +N W+ ++ G + +DDA +F MP RD +W +++SGF+++ D +A
Sbjct: 156 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 215
Query: 136 LGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L F + M S +E++F + AC +G VH LL K D +G AL++
Sbjct: 216 LEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVE 275
Query: 195 MYGKC-------------------------------GRVSCARRVFDGMRERNIVSW--- 220
Y +C GR+ A VF+GM E N VS+
Sbjct: 276 FYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLM 335
Query: 221 ----------------------------NSLITCYEQNGPASDALEVF------------ 240
N++I+ Y +NG ALE+F
Sbjct: 336 IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTW 395
Query: 241 --------------------VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ M I+ + T +++ AC+ L + +G +HA L++
Sbjct: 396 NSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIK 455
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+++ +G +L+DMY+KCG + EA+ F + NV + T++++G+A A
Sbjct: 456 -TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAIS 514
Query: 341 MFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRLLKR-ESVCPT--HYTFGNLLN 393
+F +M+E+ N ++ +++ ++ G E + +F ++R SV PT HY
Sbjct: 515 LFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHY------- 567
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC + DL LGR H + ++ + E+D V +L+ +E G R+ E M
Sbjct: 568 AC--VVDL-LGRSGHIREAEEFIKKMP-LEADGVVWGALLSACWFWMDLEVGERVAEKMF 623
Query: 454 ERD 456
D
Sbjct: 624 SFD 626
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ ++S +S YAK S + AR +F +M +R VVSWN +I+ Y+++G EAL L
Sbjct: 29 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 88
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ R + + TF ++L+ CA L L+ G+ H V+K SG ES VG++L+
Sbjct: 89 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLK------SGSESFELVGSALLYF 142
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y C + + R+F+ +V R+ V W+ M+VG +AL +F KM + D V
Sbjct: 143 YASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKM----PRRDVVAW 198
Query: 496 IGVLCACSHAGL-VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT---LI 551
++ S G + + F M + P + + C+V GR G L +T L+
Sbjct: 199 TTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLL 258
Query: 552 EAMPMQPDAVIWGSLL 567
++ D I G+L+
Sbjct: 259 MKCGLEYDPSIGGALV 274
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 328/576 (56%), Gaps = 34/576 (5%)
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS---EYSFGS 156
+++ ++ + + SWN + GF++ + +A+ + +M S +++
Sbjct: 27 YLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPV 86
Query: 157 ALSACAGSVDFKMGTQVHALLS---KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
CA D ++ + H +L K R ++ +A I M+ CG + AR+VFD
Sbjct: 87 LFKVCA---DLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESP 143
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++VSWN LI Y++ G A+EV+ M + G++PD+VT+ +VS+CA L G +
Sbjct: 144 VRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKE 203
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+ ++ LR + L NAL+DM++KCG ++EAR +FD + R +VS+
Sbjct: 204 FY-EYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSK----------- 251
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+F M E++VV WNA+I G Q +++AL LF+ ++ + P T + L+
Sbjct: 252 -------LFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLS 304
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC+ L L +G H ++ KH L ++ +G SL+DMY KCG++ + +F +
Sbjct: 305 ACSQLGALDVGIWIHRYIEKHSLSL------NVALGTSLVDMYAKCGNISEALCVFHGIQ 358
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
R+ +++ A+I G A +G + A+ F +M+ G PD +T IG+L AC H G+++ GR
Sbjct: 359 TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 418
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YFS M L P HY+ MVDLLGRAG L+EA L+E+MPM+ DA +WG+LL C++H
Sbjct: 419 YFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMH 478
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
N+ LGE AKKLLE++PS+SG YVLL MY E W + R R++M +RGV K PGCS
Sbjct: 479 GNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 538
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
IE+ G V+ F+V+DK P +++IY L L M R
Sbjct: 539 IEVNGIVSEFIVRDKSRPESEKIYDCLHCLGTHMGR 574
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 190/397 (47%), Gaps = 51/397 (12%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N+ I G +++A ++F P RD SWN +++G+ + +A+ + M SE
Sbjct: 120 NASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVK 179
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ + +S+CA D G + + + + + + +AL+DM+ KCG + ARR+
Sbjct: 180 PDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRI 239
Query: 209 FDGMRERNIVS-------------WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
FD + +R IVS WN++I Q + DAL +F M S +PDE+T+
Sbjct: 240 FDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITM 299
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+SAC+ L A G+ IH R + L ++ LG +LVDMYAKCG ++EA CVF +
Sbjct: 300 IHCLSACSQLGALDVGIWIH-RYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQ 358
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
RN ++ T+++ G A +A F +M++ AG
Sbjct: 359 TRNSLTYTAIIGGLALHGDASTAISYFNEMID----------AG---------------- 392
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P TF LL+AC + +Q GR + + RF + + + ++D+
Sbjct: 393 -----IAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS---RFNLNPQLKHY--SIMVDL 442
Query: 436 YMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G +E+ ++ E+M +E D W A++ GC +G
Sbjct: 443 LGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 18/299 (6%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D L+ SC ++ + + + + I + N L+D+++KCG ++ AR++F
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIF 240
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + + + S+LF M E+D WN+M+ G Q R +AL
Sbjct: 241 DNLEKRTI------------------VSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALA 282
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + N E + LSAC+ +G +H + K S +V +G++L+DMY
Sbjct: 283 LFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYA 342
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S A VF G++ RN +++ ++I +G AS A+ F M+ +GI PDE+T
Sbjct: 343 KCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIG 402
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++SAC + G +++ L L + +VD+ + G L EA + + MP+
Sbjct: 403 LLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPM 461
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/676 (32%), Positives = 359/676 (53%), Gaps = 50/676 (7%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P + LL SC KS+++ R++H II F + +L+ Y+ L A + +
Sbjct: 102 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENS 161
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ + F WN +I+ ++ +GF Q +AL +
Sbjct: 162 NILHPFPWNLLISSYVR--------------------------NGFCQ-----KALSAYK 190
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + +++ S L AC +D G +VH ++ SR + + +ALI MYGKCG
Sbjct: 191 QMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCG 250
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+V AR +FD + ER+ VSWNS+I+ Y G ++A E+F M A IE + + ++
Sbjct: 251 KVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAG 310
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC--VFDRMPIRN 318
+K L++ +++ +C + + AL+ C + +A+ IR+
Sbjct: 311 GYLRTGNYKGALELLSQMRKCGSHLDSV----ALIIGLGACSHIGDAKLGKEIHSFAIRS 366
Query: 319 VVSET-----SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
E ++++ Y++ +K A L+F M +++++WN++I+G +EEA L
Sbjct: 367 CFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLL 426
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R + + P + T ++L CA +A+LQ G++ H ++ + + + + N+L+
Sbjct: 427 REMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR-----EDFKDHLLLWNALV 481
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY + G V + R+F+ + ERD +++ +MI G G G AL LF++M KPDH+
Sbjct: 482 DMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 541
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
TMI VL ACSH+GLV +G+ F M +GL P +H+ CM DL GRAG L++AK +I
Sbjct: 542 TMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRN 601
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP +P +W +L+ AC++HRN +GE+ A+KLLE++P N G YVL++NMYA G W ++
Sbjct: 602 MPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKL 661
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+VR MR GV K PGC+W+++ + F+V D + EIY +L+ LT MK GY+
Sbjct: 662 AKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYI 721
Query: 674 PN---ASDDEAYEEQN 686
+ S DE E N
Sbjct: 722 SSEDFGSGDETSGEFN 737
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 219/443 (49%), Gaps = 26/443 (5%)
Query: 139 FVKMHSENFA--LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+++H+ + + L + S LS+C G Q+H + + + L+ Y
Sbjct: 86 LIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 145
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ A + + + WN LI+ Y +NG AL + +M+ GI PD T
Sbjct: 146 SAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYP 205
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC G ++H + +++ L++ NAL+ MY KCGK+ AR +FD++P
Sbjct: 206 SVLKACGEELDLGFGKEVHESI-NASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPE 264
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGL 372
R+ VS SM+S YA A +F M +E N++ WN + GY + G + AL L
Sbjct: 265 RDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALEL 324
Query: 373 FRLLKRESVCPTHYTFGNL---LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+++ C +H L L AC+++ D +LG++ H+ + R GE V
Sbjct: 325 LSQMRK---CGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI----RSCFGEVDT--VK 375
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+LI MY +C ++ +F+ M + ++WN++I GC EA L ++MLL G +
Sbjct: 376 NALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIE 435
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH---YTCMVDLLGRAGCLDE 546
P++VT+ VL C+ ++ G+++ M++ KDH + +VD+ R+G + E
Sbjct: 436 PNYVTIASVLPLCARVANLQHGKEFHCYMTRRED---FKDHLLLWNALVDMYARSGKVLE 492
Query: 547 AKTLIEAMPMQPDAVIWGSLLAA 569
A+ + + M + D + + S++A
Sbjct: 493 ARRVFD-MLGERDKMTYTSMIAG 514
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 228/489 (46%), Gaps = 41/489 (8%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ+V D+ + +L +C + + VH I S+ + + N LI +Y KC
Sbjct: 190 KQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKC 249
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMV 123
G + AR +FDK+ ++ +WNS+I+ G ++A LF SM E + WN++
Sbjct: 250 GKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIA 309
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
G+ + + AL +M L + L AC+ D K+G ++H+ +S +
Sbjct: 310 GGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFG 369
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ +ALI MY +C + A +F M +++++WNS+I+ + +A + M
Sbjct: 370 EVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREM 429
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ GIEP+ VT+ASV+ CA +A + G + H + R E ++ L+L NALVDMYA+ GK
Sbjct: 430 LLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGK 489
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ EAR VFD + R+ ++ TSM++GY
Sbjct: 490 VLEARRVFDMLGERDKMTYTSMIAGYG-------------------------------MQ 518
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
GE + AL LF + + P H T +L+AC++ + G+ ++ +R L G
Sbjct: 519 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQ-----LLFEKMRSLYGLT 573
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
+ + D++ + G + I M + + A ++G + TE +G +
Sbjct: 574 PHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE-IGEWAAE 632
Query: 484 LLCGEKPDH 492
L KP++
Sbjct: 633 KLLEMKPEN 641
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 271/759 (35%), Positives = 394/759 (51%), Gaps = 124/759 (16%)
Query: 4 QRSVKQIVGDLAFLDSSP----FAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQ 57
QRS +I + + S P F L+ + L V ++ I KS +++F+
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL--KWGFIDDASRLFASMPERD 115
+ L+ +AK G L ARKVF++M +N T N ++ GL+ KWG ++A++LF M
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG--EEATKLFMDM---- 300
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
NSM+ D E+ Y + + S EYS A V K G +VH
Sbjct: 301 ----NSMI------DVSPES--YVILLSS----FPEYSL-------AEEVGLKKGREVHG 337
Query: 176 -LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+++ V +G+ L++MY KCG ++ ARRVF M +++ VSWNS+IT +QNG
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL--VLGN 292
+A+E + M I P TL S +S+CASL K G QIH + KL DL + N
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL---KLGIDLNVSVSN 454
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA----------------SSVK 336
AL+ +YA+ G LNE R +F MP + VS S++ A++ + K
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 337 SARLMFTKM--------------------LERNV----VSWNALIAGYTQNGE------- 365
R+ F+ + L+ N+ + NALIA Y + GE
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 366 ----------------------NE---EALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
NE +AL L + + + + +L+A A++A
Sbjct: 575 FSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G + H V+ L ESD+ VG++L+DMY KCG ++ R F TM R+ SW
Sbjct: 635 LERGMEVHACSVRACL------ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEK-PDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
N+MI G A++G G EAL LF+ M L G+ PDHVT +GVL ACSHAGL+EEG K+F SMS
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIM 577
+GLAP +H++CM D+LGRAG LD+ + IE MPM+P+ +IW ++L AC R
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LG+ A+ L ++EP N+ YVLL NMYA GRW ++V+ RK M+ V K+ G SW+ +
Sbjct: 809 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
V++F+ DK HP IY LK L R+M+ GYVP
Sbjct: 869 DGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQT 907
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 240/504 (47%), Gaps = 48/504 (9%)
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+++ +K+V+ N++I L+ G A ++F MP R+ SW +VSG++++ E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
AL + M E ++Y+F S L AC GSV G Q+H L+ K Y+ D + + L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 193 IDMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
I MY KC G V A F + +N VSWNS+I+ Y Q G A +F M G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 252 EVTLASVVSACASLAAFKEGL--QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
E T S+V+ SL L QI + + L DL +G+ LV +AK G L+ AR
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQK-SGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMF---TKMLERNVVSWNALIAGYTQNGEN 366
VF++M RN V+ ++ G + + A +F M++ + S+ L++ + +
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLA 324
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL-RFLSGEESD 425
EE L+ GR+ H HV+ GL F+ G
Sbjct: 325 EE------------------------------VGLKKGREVHGHVITTGLVDFMVG---- 350
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+GN L++MY KCGS+ D R+F M ++D VSWN+MI G QNG EA+ +K M
Sbjct: 351 --IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
P T+I L +C+ + G++ S + G+ ++ L G L+
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAA 569
E + + +MP + D V W S++ A
Sbjct: 468 ECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 225/515 (43%), Gaps = 99/515 (19%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H+ L K+R DVY+ + LI+ Y + G AR+VFD M RN VSW +++ Y +NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 234 SDALEVFVR-MMASGIEPDEVTLASVVSACASLAAFK--EGLQIHARLMRCEKLRNDLVL 290
+AL VF+R M+ GI ++ SV+ AC + + G QIH + + D V+
Sbjct: 84 KEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL-SYAVDAVV 141
Query: 291 GNALVDMYAKC-GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
N L+ MY KC G + A C F + ++N VS S++S Y++A +SA +F+ M
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM---- 197
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA--DLQLGRQA 407
+ + PT YTFG+L+ +L D++L Q
Sbjct: 198 ---------------------------QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQI 230
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ K GL +D+FVG+ L+ + K GS+ ++F M R+ V+ N ++VG
Sbjct: 231 MCTIQKSGLL------TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 468 AQNGYGTEALGLFKKM------------LLCGEKPD-----------------HVT---- 494
+ +G EA LF M +L P+ HV
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 495 ---MIGV----LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
M+G+ + + G + + R+ F M+ + ++ + M+ L + GC EA
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS-----WNSMITGLDQNGCFIEA 399
Query: 548 KTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNM 603
++M + P + S L++C + LG+ + + L++ N L +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
YAE G E ++ M + V SW I+G
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQV-----SWNSIIG 489
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/693 (32%), Positives = 362/693 (52%), Gaps = 102/693 (14%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL + KS S +++HA+I+++ S + ++ +Y+ L+
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLH------------- 56
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQC-SWNSMVSGFAQHDRFSEALGYFVKMH 143
D+ +F S+P +W S++ + H F +L +F++M
Sbjct: 57 ------------------DSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQML 98
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC---- 199
+ F S L +C D + G VH + + D+Y +AL++MY K
Sbjct: 99 ASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 158
Query: 200 -----------GRVS--------------CARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
G+ S R+VF+ M +R+IVSWN++I+ QNG
Sbjct: 159 EVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE 218
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
DAL + M + + PD TL+SV+ A +G +IH +R D+ +G++L
Sbjct: 219 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR-NGYDADVFIGSSL 277
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+DMYAKC ++++ S R+ F + + + +SWN
Sbjct: 278 IDMYAKCTRVDD------------------------------SCRV-FYMLPQHDGISWN 306
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++IAG QNG +E L F+ + + P H +F +++ ACA+L L LG+Q H ++++
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
RF + ++F+ ++L+DMY KCG++ IF+ M D VSW AMI+G A +G+
Sbjct: 367 --RF----DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 420
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+A+ LFK+M + G KP++V + VL ACSHAGLV+E KYF+SM++++ + P +HY +
Sbjct: 421 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 480
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
DLLGR G L+EA I M ++P +W +LLAAC+VH+NI L E V+KKL ++P N
Sbjct: 481 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNI 540
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNK 654
G YVLLSN+Y+ GRW + ++R MR +G+ K+P CSWIEI V+ F+ DK HP
Sbjct: 541 GAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYD 600
Query: 655 EIYLVLKMLTREMKRVGYVPNASD--DEAYEEQ 685
I LK+L +M+R GYV + ++ + EEQ
Sbjct: 601 RINEALKVLLEQMEREGYVLDTTEVLHDVEEEQ 633
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 228/466 (48%), Gaps = 52/466 (11%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q++ + D + F +L SC K + VH II+ +++ N L+++Y+K
Sbjct: 96 QMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFW 155
Query: 69 CLYGA---RKVFDKMSNKNVFTWN---SIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
L +KVFD+ +V++ S G L+ ++F MP+RD SWN++
Sbjct: 156 SLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLR--------KVFEMMPKRDIVSWNTV 207
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+SG AQ+ +AL +M + + ++ S L A V+ G ++H ++ Y
Sbjct: 208 ISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGY 267
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
+DV++GS+LIDMY KC RV + RVF + + + +SWNS+I QNG + L+ F +
Sbjct: 268 DADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQ 327
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ + I+P+ V+ +S++ ACA L G Q+H ++R + ++ + +ALVDMYAKCG
Sbjct: 328 MLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR-SRFDGNVFIASALVDMYAKCG 386
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
+ AR +FD+M + ++VS T+M+ GYA
Sbjct: 387 NIRTARWIFDKMELYDMVSWTAMIMGYA-------------------------------L 415
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+G +A+ LF+ ++ E V P + F +L AC++ A L + + + R + G
Sbjct: 416 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH-AGLVDEAWKYFNSMTQDYRIIPGL 474
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
E V D+ + G +E+ M +E W+ ++ C
Sbjct: 475 EHYAAVA----DLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 516
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/657 (34%), Positives = 356/657 (54%), Gaps = 74/657 (11%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD--KMSNK 83
L SC + ++S + +H ++K+ F LI++Y+KC + + +VF+ NK
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NVF +N++I G L ++P+R AL + +M
Sbjct: 96 NVFAYNALIAGFLA-----------NALPQR--------------------ALALYNQMR 124
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
A +++F + AC D + T++H L+ K DV++GSAL++ Y K V
Sbjct: 125 HLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVG 184
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A RVF+ + R++V WN+++ + Q G +AL VF RM +G+ P T+ V+S +
Sbjct: 185 EAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFS 244
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ F G +H + + + +V+ NAL+DMY KC +CV D + +
Sbjct: 245 VMGDFDNGRAVHGFVTKM-GYESGVVVSNALIDMYGKC------KCVGDALSV------- 290
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVC 382
F M E ++ SWN++++ + + G++ L LF R++ V
Sbjct: 291 ------------------FEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQ 332
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES-----DIFVGNSLIDMYM 437
P T +L AC +LA L GR+ H ++V +GL + EES D+ + N+L+DMY
Sbjct: 333 PDLVTVTTVLPACTHLAALMHGREIHGYMVVNGL---AKEESHDVFDDVLLNNALMDMYA 389
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG++ D +F M E+D SWN MI G +GYG EAL +F +M P+ ++ +G
Sbjct: 390 KCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVG 449
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACSHAG+V+EG + S M ++G++P +HYTC++D+L RAG L EA L+ MP +
Sbjct: 450 LLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFK 509
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
D V W SLLAAC++H + L E A K++E+EP + G YVL+SN+Y +GR+ EV+ R
Sbjct: 510 ADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWR 569
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
M+++ V K+PGCSWIE++ V+VF+ D+ HP + IY L LT ++ GYVP
Sbjct: 570 YTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHGYVP 626
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE--------IFIQNRLIDVYAKCGC 69
D +L +C ++ R +H ++ + A E + + N L+D+YAKCG
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGN 393
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE----RDQCSWNSMVSG 125
+ AR VF M K+V +WN +ITG G+ +A +F+ M + ++ S+ ++S
Sbjct: 394 MRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSA 453
Query: 126 FAQHDRFSEALGYFVKMHSE 145
+ E LG+ +M S+
Sbjct: 454 CSHAGMVKEGLGFLSEMESK 473
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/705 (33%), Positives = 362/705 (51%), Gaps = 120/705 (17%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGC--LYGARKVFDKMSNKNVFTWNSIITGLLK 97
R HA ++KS FA+ N+L+ Y++ L AR+VFD++
Sbjct: 12 RSHASLLKSGFAAPT-PWNQLLTAYSRSSPDGLAAARRVFDEV----------------- 53
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
P RD+ SWN++++ A EA MH++ A + ++ GSA
Sbjct: 54 --------------PRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSA 99
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L + A + +G Q+ +L KS +++V+ SAL+D+Y KCGRV AR+VFDGM ERN
Sbjct: 100 LRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNT 159
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWN+LI Y ++G + ALE+F+ M G+ PDE T AS+++A + F Q+H +
Sbjct: 160 VSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMH-QLHGK 218
Query: 278 LMR-------------------CEKLRN------------DLVLGNALVDMYAKCGKLNE 306
+++ C L++ DL+ NA++ Y G +E
Sbjct: 219 IVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDE 278
Query: 307 ARCVFDRM----------------------------------------------PIRNVV 320
A F RM P+ N +
Sbjct: 279 AMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNAL 338
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+M + Y + ++ A F ++ ++ VSWN+++ GY+Q+G + +AL FR + E+
Sbjct: 339 --IAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSEN 396
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V Y F L + + LA LQLG+Q H GL SG S+ FV +SLI MY K G
Sbjct: 397 VRTDEYAFSAALRSSSELAVLQLGKQIH------GLVIHSGFASNDFVSSSLIFMYSKSG 450
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
++D + FE + V WNAMI G AQ+G LF +ML DH+T +G++
Sbjct: 451 IIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLIT 510
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
+CSHAGLV+EG + ++M ++G+ +HY C VDL GRAG LD+AK LI++MP +PDA
Sbjct: 511 SCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDA 570
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++W +LL AC++H N+ L VA L EP YVLLS+MY+ LG W + V+++M
Sbjct: 571 MVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVM 630
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+KRG+ K PG S IE+ V+ F +DK HP EIY +L++L +
Sbjct: 631 KKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVLLQ 675
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 341/658 (51%), Gaps = 81/658 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL SC K+ ++ A+I+ F+ I ++ ++ ARK+FDK+
Sbjct: 15 FITLLRSC---KNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N TWN++ G L+ G D LF + + ++G
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGEL---------NRIAGMP-------------- 108
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ ++F + +C + G +VH +K + S+ ++ ++LIDMY K G
Sbjct: 109 --------NCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGC 160
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A +VF M ERN+V W ++I Y + VVS
Sbjct: 161 VEDAYKVFGEMHERNVVVWTAIINGY-------------------------ILCGDVVSG 195
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
RL R D+V+ + L+ Y + + AR +FD+MP R+ +S
Sbjct: 196 --------------RRLFDLAPER-DVVMWSVLISGYIESKNMAAARELFDKMPNRDTMS 240
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES 380
+M++GYA V+ +F +M ERNV SWN LI GY +NG E L F R+L
Sbjct: 241 WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGH 300
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P +T +L+AC+ L L +G+ H + G + ++FVGN LIDMY KCG
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYK------GNLFVGNVLIDMYAKCG 354
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+E+ +F + +D +SWN +I G A +G+ +ALG+F +M GE+PD VT +G+L
Sbjct: 355 VIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILS 414
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+H GLV++G YF SM + + P +HY CMVDLLGRAG LD+A I MP++PDA
Sbjct: 415 ACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDA 474
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW +LL AC++++N+ + E ++L+E+EP+N +V++SN+Y +LGR +V R++ M
Sbjct: 475 VIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAM 534
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
R G K PGCS IE V F D+RH + IY VLK LT ++ GYVPN SD
Sbjct: 535 RDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLSD 592
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 185/412 (44%), Gaps = 68/412 (16%)
Query: 4 QRSVKQIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNR 59
R + G+L + P F ++ SC + + V + VH K F S F+
Sbjct: 91 HRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATS 150
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG---------------------LLKW 98
LID+Y+K GC+ A KVF +M +NV W +II G ++ W
Sbjct: 151 LIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMW 210
Query: 99 -----GFIDD-----ASRLFASMPERDQCSWNSMVSGFA--------------------- 127
G+I+ A LF MP RD SWN+M++G+A
Sbjct: 211 SVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVF 270
Query: 128 ----------QHDRFSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHAL 176
++ FSE L F +M E + ++++ + LSAC+ MG VH
Sbjct: 271 SWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVY 330
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
Y ++++G+ LIDMY KCG + A VF+ + ++I+SWN++I +G A DA
Sbjct: 331 AESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDA 390
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
L +F RM + G EPD VT ++SAC + K+G ++ + + +VD
Sbjct: 391 LGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVD 450
Query: 297 MYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ + G L++A +MPI + V +++ +V+ A L +++E
Sbjct: 451 LLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIE 502
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 338/613 (55%), Gaps = 56/613 (9%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K + NS+I LK G + A LF + +WNSM+SG+A + EALG F
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 289
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + LSE SF S + CA + + Q+H + K + D + +AL+ Y KC
Sbjct: 290 MRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMA 349
Query: 202 VSCARRVFDGMRER----NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ A R+F +E N+VSW ++I+ + QN +A+ +F M G+ P+E T +
Sbjct: 350 MLDALRLF---KETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSV 406
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++A ++ ++HA++++ R+ V G AL+D Y K GK++EA V
Sbjct: 407 ILTALPVISP----SEVHAQVVKTNYERSSTV-GTALLDAYVKLGKVDEAAKV------- 454
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
F+ + +++V+W+A++AGY Q GE E A+ +F L
Sbjct: 455 ------------------------FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELT 490
Query: 378 RESVCPTHYTFGNLLNACA-NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P +TF ++LN CA A + G+Q H +K L +S + V ++L+ MY
Sbjct: 491 KGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRL------DSSLCVSSALLTMY 544
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
K G +E +F+ E+D VSWN+MI G AQ+G +AL +FK+M K D VT I
Sbjct: 545 AKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFI 604
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GV AC+HAGLVEEG KYF M ++ +AP K+H +CMVDL RAG L++A +I+ MP
Sbjct: 605 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPN 664
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ IW ++LAAC+VH+ LG A+K++ + P +S YVLLSNMYAE G W E +V
Sbjct: 665 LAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKV 724
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RKLM +R V K+PG SWIE+ F+ D+ HPL +IY+ L+ L+ +K +GY P+
Sbjct: 725 RKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT 784
Query: 677 S------DDEAYE 683
S DDE E
Sbjct: 785 SYVLQDIDDEHKE 797
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 227/474 (47%), Gaps = 59/474 (12%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A LF P+RD+ S+ S++ GF++ R EA F+ + + F S L A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
D G Q+H K + DV +G++L+D Y K R VFD M+ERN+V+W +L
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I+ Y +N + L +F+RM G +P+ T A+ + A GLQ+H +++
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK-NG 228
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L + + N+L+++Y KCG + +AR +FD+ +++VV+ SM+SGYA
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA------------- 275
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
NG + EALG+F ++ V + +F +++ CANL +L+
Sbjct: 276 ------------------ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRF 317
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDWVSWNA 462
Q H VVK+G F D + +L+ Y KC ++ D R+F ET + VSW A
Sbjct: 318 TEQLHCSVVKYGFVF------DQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTA 371
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-------HAGLVEEGRKYF 515
MI G QN EA+GLF +M G +P+ T +L A HA +V+ +
Sbjct: 372 MISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 431
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S++ T ++D + G +DEA + + D V W ++LA
Sbjct: 432 STVG------------TALLDAYVKLGKVDEAAKVFSGID-NKDIVAWSAMLAG 472
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 203/422 (48%), Gaps = 82/422 (19%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG----- 94
+VH ++K+ I + N LI++Y KCG + AR +FDK K+V TWNS+I+G
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 278
Query: 95 ----------------------------------------------LLKWGFIDDASRLF 108
++K+GF+ D +
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT 338
Query: 109 ASMPERDQC--------------------SWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
A M +C SW +M+SGF Q+D EA+G F +M +
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E+++ L+A + ++VHA + K+ Y +G+AL+D Y K G+V A +V
Sbjct: 399 PNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKV 454
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAA 267
F G+ ++IV+W++++ Y Q G A+++F + G++P+E T +S+++ C A+ A+
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTAS 514
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+G Q H ++ +L + L + +AL+ MYAK G + A VF R +++VS SM+S
Sbjct: 515 MGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMIS 573
Query: 328 GYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLKRE-SVC 382
GYA+ A +F +M +R V V++ + A T G EE F ++ R+ +
Sbjct: 574 GYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 633
Query: 383 PT 384
PT
Sbjct: 634 PT 635
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 38/304 (12%)
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
R+ A +FD +R+ S+ SL+ + ++G +A +F+ + G+E D +SV+
Sbjct: 46 RLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLK 105
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A+L G Q+H + ++ L +D+ +G +LVD Y
Sbjct: 106 VSATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYM--------------------- 143
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
K S+ K R +F +M ERNVV+W LI+GY +N NEE L LF ++ E
Sbjct: 144 ----------KGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEG 193
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +TF L A G Q HT VVK+GL + I V NSLI++Y+KCG
Sbjct: 194 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL------DKTIPVSNSLINLYLKCG 247
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+V +F+ + V+WN+MI G A NG EALG+F M L + + ++
Sbjct: 248 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIK 307
Query: 501 ACSH 504
C++
Sbjct: 308 LCAN 311
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA+++K+ + + L+D Y K G + A KVF + NK++ W+
Sbjct: 419 VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWS----------- 467
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+M++G+AQ A+ F ++ +E++F S L+
Sbjct: 468 --------------------AMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNV 507
Query: 161 CAGSV-DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
CA + G Q H KSR S + + SAL+ MY K G + A VF RE+++VS
Sbjct: 508 CAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVS 567
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WNS+I+ Y Q+G A AL+VF M ++ D VT V +AC +EG + ++
Sbjct: 568 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMV 627
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
R K+ + +VD+Y++ G+L +A V D MP
Sbjct: 628 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMP 663
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
G A +S + A +F K +R+ S+ +L+ G++++G +EA LF ++ +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F ++L A L D GRQ H +K G FL D+ VG SL+D YMK + +DG
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFG--FLD----DVSVGTSLVDTYMKGSNFKDGRN 153
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M ER+ V+W +I G A+N E L LF +M G +P+ T L + G+
Sbjct: 154 VFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGV 213
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
G + + + K +GL +++L + G + +A+ L + ++ V W S++
Sbjct: 214 GGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMI 271
Query: 568 AA 569
+
Sbjct: 272 SG 273
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 22 FAKLLDSCL-RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F+ +L+ C + S+ ++ H IKS+ S + + + L+ +YAK G + A +VF +
Sbjct: 501 FSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ 560
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K++ +WNS+I SG+AQH + +AL F
Sbjct: 561 REKDLVSWNSMI-------------------------------SGYAQHGQAMKALDVFK 589
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKC 199
+M + +F +AC + + G + ++ + + + S ++D+Y +
Sbjct: 590 EMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 649
Query: 200 GRVSCARRVFDGM 212
G++ A +V D M
Sbjct: 650 GQLEKAMKVIDNM 662
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 250/713 (35%), Positives = 380/713 (53%), Gaps = 91/713 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGAR 74
L+ P+ LL+ C K+++ +++H+ IIK+ + +F+Q++LI A G L A
Sbjct: 26 LEQHPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYAL 82
Query: 75 KVFD---KMSNKNVFTWNSIITG----------------LLKWGFIDDASRLFASMPERD 115
+F+ + NVF WNS+I G +L +G + S F +
Sbjct: 83 SLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHTFPFL---- 137
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL--SEYSFGSALS--ACAGSVDFKMGT 171
+ S A H+ G + H+ AL + + S + A G +DF
Sbjct: 138 ---FKSCTKAKATHE------GKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDF---- 184
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+ KS V +ALI Y G + ARR+FD + +++VSWN++I+ Y Q+G
Sbjct: 185 -ARLVFDKSSLRDAVSF-TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSG 242
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+A+ F M + + P++ T+ V+SAC + + G I +R ++L L
Sbjct: 243 RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWI-GSWVRDNGFGSNLQLT 301
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NAL+DMY KCG ET + AR +F + E++V+
Sbjct: 302 NALIDMYCKCG-------------------ETDI------------ARELFDGIEEKDVI 330
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SWN +I GY+ EEAL LF ++ R +V P TF +L+ACA L L LG+ H ++
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
K+ LR S+ + SLIDMY KCG +E R+F +M R+ SWNAM+ G A +G
Sbjct: 391 DKN-LR----NSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445
Query: 472 YGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
+ AL LF +M+ G +PD +T +GVL AC+ AGLV+ G +YF SM +++G++P H
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
Y CM+DLL RA +EA+ L++ M M+PD IWGSLL+ACK H + GEYVA++L ++E
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLE 565
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
P N+G +VLLSN+YA GRW +V R+R + +G+ K PGC+ IEI G V+ F+V DK H
Sbjct: 566 PENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFH 625
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
P IY +L + + ++ G+VPN S+ DE ++E S + I F
Sbjct: 626 PECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISF 678
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 344/639 (53%), Gaps = 70/639 (10%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H +IK + + + N L+D Y K CLY A
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA-------------------------- 194
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
S+LF M +D ++NS+++G++ EA+ F+++H+ S+++F + LS
Sbjct: 195 -----SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A G D K G QVH + K+ + +V++G+AL+D Y K +V ++F M E + +S
Sbjct: 250 AAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGIS 309
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+N +IT Y NG ++ ++F ++ + + + A+++S S + G QIH
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH---- 365
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
C+ + G E+R E ++V YAK + K A+
Sbjct: 366 -CQAI---------------TVGANFESRV------------ENALVDMYAKCNGDKEAQ 397
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + ++ V W A+I+ Y Q G++EE + +F ++R V TF ++L ACANLA
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ LGRQ H+ +++ SG S+++ G++L+D Y KCG + D + F M ER+ VS
Sbjct: 458 SISLGRQLHSLLIR------SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNA+I AQNG L F++M+ G KPD V+ + VL ACSH G VEE +F+SM+
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+ + + P ++HYT MVD+L R G DEA+ L+ MP +P ++W S+L +C++H+N L
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 580 EYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
+ A +L +E ++ PY+ +SN+YA G+W V +V+K MR RGV K P SW+EI
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+VF DK HP K+I + L++EM++ GY P+ +
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 260/552 (47%), Gaps = 40/552 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L +S S++ + A I+K+ F N ++ + + G L A +VFD+M KN
Sbjct: 14 LRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKN 73
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ N +I+G LK+G + A LF M ER SW ++ G+ Q ++ EA + M
Sbjct: 74 TISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR 133
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + LS + Q+H + K Y ++ + ++L+D Y K +
Sbjct: 134 GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYL 193
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A ++F M ++ V++NSL+T Y G +A+E+F+ + SGI+P + T A+++SA
Sbjct: 194 ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L K G Q+H +++ + N V GNAL+D Y+K +++E +F MP
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFV-GNALLDYYSKHDQVDEVGKLFXEMP--------- 303
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
E + +S+N +I Y NG+ +E+ LFR L+
Sbjct: 304 ----------------------ELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ F LL+ + +L++GRQ H + G F S E N+L+DMY KC ++
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE------NALVDMYAKCNGDKE 395
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+IF+ + + V W AMI Q G E + +F M G D T +L AC++
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+ GR+ S + + ++ + + ++D + GC+ +A MP + ++V W
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSG-SALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWN 513
Query: 565 SLLAACKVHRNI 576
+L++A + N+
Sbjct: 514 ALISAYAQNGNV 525
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 192/375 (51%), Gaps = 43/375 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL + + ++VH ++K+ F +F+ N L+D Y+K D+
Sbjct: 244 FAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK----------HDQ-- 291
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+D+ +LF MPE D S+N +++ +A + +F E+ F K
Sbjct: 292 -------------------VDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVH--ALLSKSRYSSDVYMGSALIDMYGKC 199
+ F ++ F + LS S++ +MG Q+H A+ + + S V +AL+DMY KC
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV--ENALVDMYAKC 390
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
A+++FD + ++ V W ++I+ Y Q G + + VF M +G+ D+ T AS++
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA+LA+ G Q+H+ L+R + N + G+AL+D YAKCG + +A F MP RN
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSN-VYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRL 375
VS +++S YA+ +V F +M++ + VS+ ++++ + G EEAL F
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNS 569
Query: 376 LKR-ESVCPT--HYT 387
+ + V P HYT
Sbjct: 570 MTQIYEVTPKREHYT 584
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA LL S ++ R++H + I E ++N L+D+YAKC A+K+FD +
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ K+ W +M+S + Q + E + F
Sbjct: 404 ACKSTVPW-------------------------------TAMISAYVQKGKHEEGINVFS 432
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + +F S L ACA +G Q+H+LL +S + S+VY GSAL+D Y KCG
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A + F M ERN VSWN+LI+ Y QNG L F +M+ SG +PD V+ SV+S
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ +E L + + ++ ++VD+ + G+ +EA + MP
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF 608
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 45/216 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA +L +C S+S R++H+ +I+S F S ++ + L+D YAKCGC+ A K F
Sbjct: 442 DQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSF 501
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +N +WN++I S +AQ+ L
Sbjct: 502 GEMPERNSVSWNALI-------------------------------SAYAQNGNVDGTLN 530
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M + SF S LSAC+ G V+ F TQ++ + K + +
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY------T 584
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+++D+ + GR A ++ M E + + W+S++
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/688 (34%), Positives = 356/688 (51%), Gaps = 101/688 (14%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ + N I+ K +D A +LF MP+R SWN+M+S +++H RFSEAL MH
Sbjct: 72 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 131
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ LSE +F S LS CA + G +H L+ KS S +GSAL+ Y C +
Sbjct: 132 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 191
Query: 205 ARRVFD-------------------------------GMRERNIVSWNSLITCYEQNGPA 233
ARRVFD M R++V+W +LI+ + +NG
Sbjct: 192 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 251
Query: 234 -SDALEVF-------------------VR-----------------MMASGIEPDEV--- 253
ALE+F VR +M G+E D
Sbjct: 252 CGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 311
Query: 254 -----------------TLASVVSACA-SLAAFKEGLQIHARLMRCEKLRNDL-----VL 290
VV+ C +L + EGL R+ E + N + V
Sbjct: 312 ALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVS 371
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML-ERN 349
N ++ YA G++++++ +F++MP R + S +M+S Y++ + A +F + E++
Sbjct: 372 YNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKD 431
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
V+WN++I+GY +G+ EEAL L+ + R S+ T TF L +AC+ L LQ G+ H
Sbjct: 432 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHA 491
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
H++K ES+++VG SLIDMY KCGS+ + F ++ + +W A+I G A
Sbjct: 492 HLIKTPF------ESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAY 545
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G G+EA+ LF M+ G P+ T +GVL ACS AGLV EG K F SM + + + P +
Sbjct: 546 HGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLE 605
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY C+VDLLGR+G + EA+ I+ MP++ D V+WG+LL+AC ++ +GE VA+K+
Sbjct: 606 HYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSF 665
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
+P YV+LSN+YA LGRW E + VRK++R V K PGCSWIE+ ++VF ++D+
Sbjct: 666 DPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRS 725
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP IY L+ LT + V + + S
Sbjct: 726 HPYCNMIYATLEHLTANINSVVHFDHVS 753
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 207/390 (53%), Gaps = 22/390 (5%)
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
S++ + I Y K ++ AR++FD M +R +VSWN++I+ Y ++G S+AL + M
Sbjct: 70 SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
S ++ E T +SV+S CA L ++G IH +++ +LV G+AL+ YA C +
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELV-GSALLYFYASCFE 188
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ EAR VFD + RN V + M+ GY + + A +F KM R+VV+W LI+G+++N
Sbjct: 189 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 248
Query: 364 GEN-EEALGLFRLLKRE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
G+ +AL +FRL+ R P +TF ++ AC L L +GR H ++K GL
Sbjct: 249 GDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL----- 303
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
E D +G +L++ Y +C +++D R+ + +V + N++I G G +A +F
Sbjct: 304 -EYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFN 362
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT--CMVDLLG 539
M + + V+ ++ + G +++ ++ F M P + ++ M+ +
Sbjct: 363 GM----TEMNPVSYNLMIKGYAVGGQMDDSKRLFEKM-------PCRTIFSSNTMISVYS 411
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R G +D+A L E + D V W S+++
Sbjct: 412 RNGEIDKALELFEETKNEKDPVTWNSMISG 441
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 235/543 (43%), Gaps = 115/543 (21%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S F+ +L C R + + D + +H ++KS S + + L+ YA C + AR+V
Sbjct: 136 LSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRV 195
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH-DRFSEA 135
FD + +N W+ ++ G + +DDA +F MP RD +W +++SGF+++ D +A
Sbjct: 196 FDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKA 255
Query: 136 LGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
L F + M S +E++F + AC +G VH LL K D +G AL++
Sbjct: 256 LEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVE 315
Query: 195 MYGKC-------------------------------GRVSCARRVFDGMRERNIVSW--- 220
Y +C GR+ A VF+GM E N VS+
Sbjct: 316 FYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLM 375
Query: 221 ----------------------------NSLITCYEQNGPASDALEVFVRM--------- 243
N++I+ Y +NG ALE+F
Sbjct: 376 IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTW 435
Query: 244 --MASGI----EPDEV-----------------TLASVVSACASLAAFKEGLQIHARLMR 280
M SG +P+E T +++ AC+ L + ++G +HA L++
Sbjct: 436 NSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIK 495
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+++ +G +L+DMY+KCG + EA+ F + NV + T++++G+A A
Sbjct: 496 -TPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAIS 554
Query: 341 MFTKMLERNVVSWNALIAGY----TQNGENEEALGLFRLLKR-ESVCPT--HYTFGNLLN 393
+F M+E+ + A G ++ G E + +F ++R SV PT HY
Sbjct: 555 LFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHY------- 607
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC + DL LGR H + ++ + E+D V +L+ +E G R+ E M
Sbjct: 608 AC--VVDL-LGRSGHIREAEEFIKKMP-LEADGVVWGALLSACWFWMDLEVGERVAEKMF 663
Query: 454 ERD 456
D
Sbjct: 664 SFD 666
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 14/256 (5%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ ++S +S YAK S + AR +F +M +R VVSWN +I+ Y+++G EAL L
Sbjct: 69 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 128
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ R + + TF ++L+ CA L L+ G+ H V+K SG ES VG++L+
Sbjct: 129 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLK------SGSESFELVGSALLYF 182
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y C + + R+F+ +V R+ V W+ M+VG +AL +F KM + D V
Sbjct: 183 YASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKM----PRRDVVAW 238
Query: 496 IGVLCACSHAGL-VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT---LI 551
++ S G + + F M + P + + C+V GR G L +T L+
Sbjct: 239 TTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLL 298
Query: 552 EAMPMQPDAVIWGSLL 567
++ D I G+L+
Sbjct: 299 MKCGLEYDPSIGGALV 314
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/661 (33%), Positives = 347/661 (52%), Gaps = 70/661 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ +C V VH K E+ + N L+D+Y+KCG
Sbjct: 298 DVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCG--------- 348
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ +A LF ++ SWN+++ G+++ F
Sbjct: 349 ----------------------YLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFE 386
Query: 138 YFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+M E ++E + + L AC+G ++H + + D + +A + Y
Sbjct: 387 LLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAY 446
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + CA RVF GM + + SWN+LI + QNG +L++F+ MM SG++PD T+
Sbjct: 447 AKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIG 506
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++ ACA L + G +IH ++R L D +G +L+ +Y +C
Sbjct: 507 SLLLACARLKFLRCGKEIHGFMLR-NGLELDEFIGISLMSLYIQC--------------- 550
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+SM+ G +L+F KM +++V WN +I G++QN EAL FR +
Sbjct: 551 ------SSMLLG----------KLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQM 594
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P +L AC+ ++ L+LG++ H+ +K L D FV +LIDMY
Sbjct: 595 LSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHL------SEDAFVTCALIDMY 648
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +E IF+ + E+D WN +I G +G+G +A+ LF+ M G +PD T +
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL AC+HAGLV EG KY M +G+ P +HY C+VD+LGRAG L EA L+ MP
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD+ IW SLL++C+ + ++ +GE V+KKLLE+EP+ + YVLLSN+YA LG+W EV +V
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKV 828
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R+ M++ G+ K GCSWIEI G V F+V D +K+I L +++ ++GY P+
Sbjct: 829 RQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDT 888
Query: 677 S 677
S
Sbjct: 889 S 889
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 258/529 (48%), Gaps = 82/529 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL +C K++ R+VHA + S + +++ + R+I +Y+ CG +R VFD K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F + N+++SG++++ F +A+ F+++
Sbjct: 158 DLFLY-------------------------------NALLSGYSRNALFRDAISLFLELL 186
Query: 144 S-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
S + A ++ ACAG D ++G VHAL K+ SD ++G+ALI MYGKCG V
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS---GIEPDEVTLASVV 259
A +VF+ MR RN+VSWNS++ +NG + VF R++ S G+ PD T+ +V+
Sbjct: 247 ESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVI 306
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA++ + G+ +H + + ++ + N+LVDMY+KCG L EAR +FD +NV
Sbjct: 307 PACAAVGEVRMGMVVHGLAFKL-GITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNV 365
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS WN +I GY++ G+ L + ++RE
Sbjct: 366 VS-------------------------------WNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 380 S-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
V T N+L AC+ L ++ H + +HG FL E V N+ + Y K
Sbjct: 395 EKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHG--FLKDE----LVANAFVAAYAK 448
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
C S++ R+F M + SWNA+I AQNG+ ++L LF M+ G PD T+ +
Sbjct: 449 CSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508
Query: 499 LCACSHAGLVEEGRKYFSSMSKEH-------GLAPLKDHYTCMVDLLGR 540
L AC+ + G++ M + G++ + + C LLG+
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGK 557
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 196/383 (51%), Gaps = 51/383 (13%)
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARR 207
+S+ + G L AC + +G +VHAL+S S + +DV + + +I MY CG S +R
Sbjct: 90 ISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG 149
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLA 266
VFD +E+++ +N+L++ Y +N DA+ +F+ ++ A+ + PD TL V ACA +A
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
+ G +HA ++ +D +GNAL+ MY KCG + A VF+ M RN
Sbjct: 210 DVELGEAVHALALKAGGF-SDAFVGNALIAMYGKCGFVESAVKVFETM--RN-------- 258
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL---KRESVCP 383
RN+VSWN+++ ++NG E G+F+ L + E + P
Sbjct: 259 ---------------------RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVP 297
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++ ACA + ++++G +V HGL F G ++ V NSL+DMY KCG +
Sbjct: 298 DVATMVTVIPACAAVGEVRMG------MVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLG 351
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCAC 502
+ +F+ ++ VSWN +I G ++ G L ++M + + + VT++ VL AC
Sbjct: 352 EARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
Query: 503 SHAGLVEEGRKYFSSMSKEHGLA 525
S G S+ + HG A
Sbjct: 412 S-------GEHQLLSLKEIHGYA 427
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 237/531 (44%), Gaps = 95/531 (17%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
QR K V ++ L+ P +C + + +H + F + + N +
Sbjct: 392 QREEKVRVNEVTVLNVLP------ACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAA 445
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
YAKC L A +VF M K V +WN++I + GF + LF M M
Sbjct: 446 YAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVM----------MD 495
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
SG DRF + GS L ACA + G ++H + ++
Sbjct: 496 SGM-DPDRF--------------------TIGSLLLACARLKFLRCGKEIHGFMLRNGLE 534
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
D ++G +L+ +Y +C + + +FD M +++V WN +IT + QN +AL+ F +M
Sbjct: 535 LDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQM 594
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
++ GI+P E+ + V+ AC+ ++A + G ++H+ ++ L D + AL+DMYAKCG
Sbjct: 595 LSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGC 653
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ +++ +FDR+ E++ WN +IAGY +
Sbjct: 654 MEQSQNIFDRVN-------------------------------EKDEAVWNVIIAGYGIH 682
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G +A+ LF L++ + P +TF +L AC H +V GL++L +
Sbjct: 683 GHGLKAIELFELMQNKGGRPDSFTFLGVLIAC-----------NHAGLVTEGLKYLGQMQ 731
Query: 424 SDIFVGNSL------IDMYMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEA 476
+ V L +DM + G + + ++ M E D W++++ C YG
Sbjct: 732 NLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSC--RNYGDLE 789
Query: 477 LG--LFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
+G + KK+L L K ++ ++ L A G +E RK M KE+GL
Sbjct: 790 IGEEVSKKLLELEPNKAENYVLLSNLYA--GLGKWDEVRKVRQRM-KENGL 837
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 187/399 (46%), Gaps = 72/399 (18%)
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+L+ + QNG S +S I + + + ++ AC G ++HA +
Sbjct: 74 NLLHSHAQNGTVS----------SSDISKEAIGI--LLRACGHHKNIHVGRKVHALVSAS 121
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
KLRND+VL ++ MY+ CG S +R +
Sbjct: 122 HKLRNDVVLSTRIIAMYSACG-------------------------------SPSDSRGV 150
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLAD 400
F E+++ +NAL++GY++N +A+ LF LL + P ++T + ACA +AD
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++LG H +K +G SD FVGN+LI MY KCG VE ++FETM R+ VSW
Sbjct: 211 VELGEAVHALALK------AGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSW 264
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHAGLVEEGRKYFSS 517
N+++ C++NG E G+FK++L+ E+ PD TM+ V+ AC+ G V G
Sbjct: 265 NSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHG 323
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE----AMPMQPDAVIWG--------- 564
++ + G+ +VD+ + G L EA+ L + + + +IWG
Sbjct: 324 LAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRG 383
Query: 565 --SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
LL + + + E +L + P+ SG + LLS
Sbjct: 384 VFELLQEMQREEKVRVNEVT---VLNVLPACSGEHQLLS 419
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/688 (35%), Positives = 361/688 (52%), Gaps = 74/688 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L SC ++ R VHA +++ E+ + N L+ +YAKCG + ARKVF
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVF 253
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D MS + +WN++I G + + LF M E D+ N M
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLE-DEVEPNLMT-------------- 298
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ + S L + D ++HAL K +++DV ++LI MY
Sbjct: 299 -----------ITSVTVASGLLS-----DLDFAKEIHALAVKRGFATDVAFCNSLIQMYS 342
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
GR+ A VF M R+ +SW ++I+ YE+NG ALEV+ M + + PD+VT+AS
Sbjct: 343 SLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVAS 402
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ACASL G+++H L + +V+ NALV+MYAK + +A VF MP +
Sbjct: 403 ALAACASLGRLDVGIKLH-ELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDK 461
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V+S W+++IAG+ N +N EAL FR +
Sbjct: 462 DVIS-------------------------------WSSMIAGFCFNHKNFEALYYFRHML 490
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ V P TF L ACA L+ G++ H HV++ G+ S+ +V N+L+D+Y+
Sbjct: 491 AD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGI------ASEGYVPNALLDLYV 543
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG F +D VSWN M+ G +G+G AL F +ML GE PD VT +
Sbjct: 544 KCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVA 603
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+LC CS AG+V +G + F SM++++ + P HY CMVDLL R G L E I MP+
Sbjct: 604 LLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPIT 663
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA +WG+LL C++HRNI LGE AK +LE+EP+++G +VLLS++YA+ G W EV +VR
Sbjct: 664 PDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVR 723
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K MR +G+ GCSW+E+ G ++ F+ D+ HP KEI VL + MK G+ P
Sbjct: 724 KTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPV-- 781
Query: 678 DDEAYEEQNGSNSTSDCQIDFQVETAIA 705
E+Y ++ S D A+A
Sbjct: 782 --ESYSLEDKEVSKDDVLCGHSERLAVA 807
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 195/407 (47%), Gaps = 41/407 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ M + G A +VF M ER++ SWN ++ Y + G +AL+++ RM+ +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
PD T V+ +C + G ++HA ++R L ++ + NALV MYAKCG + A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRF-GLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFD M + + +S +M++G + +N E E
Sbjct: 250 RKVFDGMSLTDCISWNAMIAG-------------------------------HFENHECE 278
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L LF + + V P T ++ A L+DL ++ H VK G +D+
Sbjct: 279 AGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGF------ATDVA 332
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSLI MY G + + C +F M RD +SW AMI G +NG+ +AL ++ M +
Sbjct: 333 FCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNN 392
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD VT+ L AC+ G ++ G K ++ G +V++ ++ +++A
Sbjct: 393 VSPDDVTVASALAACASLGRLDVGIK-LHELATSKGFIRYIVVANALVEMYAKSKIIEKA 451
Query: 548 KTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSN 593
+ + MP D + W S++A C H+N Y L +++P++
Sbjct: 452 IEVFKYMP-DKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNS 497
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 413 KHGLRFLSGEES-----DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+HGLR ++ + +GN+++ M ++ G ++F M ERD SWN M+ G
Sbjct: 111 EHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGY 170
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+ G+ EAL L+ +ML G +PD T VL +C + GR+ + + + GL
Sbjct: 171 GKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLR-FGLGVE 229
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
D +V + + G ++ A+ + + M + D + W +++A
Sbjct: 230 VDVLNALVTMYAKCGDVEAARKVFDGMSLT-DCISWNAMIAG 270
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/475 (41%), Positives = 295/475 (62%), Gaps = 9/475 (1%)
Query: 205 ARRVFDGMRERN--IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A+++F+ + ++ WNS + + DA+ +F R+ + PD T +SV+ AC
Sbjct: 79 AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+L G +H + + R++L L N +V +YA CG++ EAR +F++MP R+VV+
Sbjct: 139 LNLLDLSNGRILHGVVEKV-GFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTW 197
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
M++ K + A +F++M ERNV SW ++IAGY Q G+ +EA+ LF ++ V
Sbjct: 198 NIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T +L ACA+L L LG + H + +HG + ++ + N+LIDMY+KCG +
Sbjct: 258 CNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFK------RNVRISNTLIDMYVKCGCL 311
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
E+ C++FE M ER VSW+AMI G A +G EAL LF M G +P+ VT IG+L AC
Sbjct: 312 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHAC 371
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
SH GL+ EGR++F+SM++++G+ P +HY CMVDLL RAG L EA I MPM+P+ V+
Sbjct: 372 SHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV 431
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
WG+LL AC+VH+N+ + E K LLE++P N G YV+LSN+YAE GRW + RVRK M+
Sbjct: 432 WGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKD 491
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
R V K PG S I + G V+ F+ ++ HP ++I+ + L EM+ GYVPN S
Sbjct: 492 RQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTS 546
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 167/300 (55%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +CL +S+ R +H + K F S +++QN ++ +YA CG + AR +F
Sbjct: 127 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLF 186
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM ++V TWN +I L+K G + A LF+ MPER+ SW SM++G+ Q + EA+
Sbjct: 187 EKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIH 246
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM +E + + L+ACA +G ++H ++ + +V + + LIDMY
Sbjct: 247 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 306
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +VF+ M ER +VSW+++I +G A +AL +F M GIEP+ VT
Sbjct: 307 KCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIG 366
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ + EG + A + R + + +VD+ ++ G L+EA MP++
Sbjct: 367 LLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK 426
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 199/463 (42%), Gaps = 98/463 (21%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
+ R+VHA+IIK+ I R+ V A + A+++F+ + + T+
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETF-------- 94
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
WNS + A+ D +A+ F ++ + ++ S
Sbjct: 95 ---------------------VWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSS 133
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L AC +D G +H ++ K + S++Y+ + ++ +Y CG + AR +F+ M +R+
Sbjct: 134 VLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRD 193
Query: 217 IVSWN-------------------------------SLITCYEQNGPASDALEVFVRMMA 245
+V+WN S+I Y Q G A +A+ +F +M
Sbjct: 194 VVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEE 253
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G++ +EVT+ +V++ACA L A G++IH R + ++ + N L+DMY KCG L
Sbjct: 254 AGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGCLE 312
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
EA VF+ M R VVS ++M+ G A +G
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLA-------------------------------MHGR 341
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EEAL LF + + + P TF LL+AC+++ + GR+ + + G
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD-----YGIIPQ 396
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D+ + G + + M ++ + V W A++ C
Sbjct: 397 IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGAC 439
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 359/655 (54%), Gaps = 30/655 (4%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L+ S + ++ RI FAS+ + N I G + ARKVFD+M ++
Sbjct: 23 LNRSFSSLKTPNPSKITTRIPFPVFASDTYESNVKISNLGLRGKVKEARKVFDEMPRRDA 82
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
++ S+IT LK + A LF +PER+ + ++M+SG+ + R +A F +M
Sbjct: 83 VSYASMITVYLKNKDLPQAEILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVER 142
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N +S+ S +S FK+G A+ L +V + + Y + G +
Sbjct: 143 NV----FSWTSLVSGY-----FKIGNVDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDE 193
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +F+ M E+NI++W +++ Y +N +A E+F +M + + ++S C +
Sbjct: 194 ARDIFNQMPEKNIIAWTAMVKSYVENDEIDEAFELFYQMPQRNL----YSWNIMISGCIN 249
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
E +Q+ + + RN+ V LV A+ G + AR FD MP +++ + +
Sbjct: 250 ANRLNEAIQLFNSMPQ----RNE-VSWTTLVTGLARNGMMELARKYFDHMPTKDIAAWNA 304
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++ Y S+ A +F M E+N+VSWNALI GY +NG +L L+ R + P
Sbjct: 305 MITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPN 364
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++L AC ++ +L QAH V+ G E D + N L+ Y +CG V
Sbjct: 365 ETTITSVLTACDSILELM---QAHGLVIHLGF------EQDKVLANGLVTTYSRCGDVLS 415
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
IF+ + +D VSW AMI+ + +G G AL +F +ML G KPD +T +G+L ACSH
Sbjct: 416 ARFIFDQLEIKDIVSWTAMILAYSNHGCGPHALQVFARMLRSGAKPDGITFVGLLSACSH 475
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP-DAVIW 563
AGLV++G+ F SMS +G+ P +HY+C+VD+LGRAG +++A ++ MP D +
Sbjct: 476 AGLVKKGQMLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPHECDGAVL 535
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL AC++H+++ L ++ +KL+E EP++SG YVLL+N YA G+W E VRK M++R
Sbjct: 536 GALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAACGKWNEFAEVRKEMKER 595
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL-KMLTREMKRVGYVPNAS 677
V K+PG S IE+ G +VF V+D+ HP +EIYL L + L M+ +GY P +S
Sbjct: 596 NVKKEPGFSQIEVKGKSHVFFVRDRSHPQLEEIYLFLDEKLLPLMREMGYTPESS 650
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/674 (32%), Positives = 354/674 (52%), Gaps = 63/674 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARI-IKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
++ S +KLL C +S+ +HA + I AS N+L+ +Y+K G + A K
Sbjct: 1 MNHSLISKLLKQC---RSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHK 57
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD+ N F W ++I GF +++++ A
Sbjct: 58 LFDETPEPNSFLWTALI-------------------------------HGFTENNQYENA 86
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+F+KMH EN ++ S L A + K G V+ L + Y D+ + + +I++
Sbjct: 87 FAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIEL 146
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
+ +CG + AR++FD M ER+ VSWNS+IT Y NG A ++F RM + +
Sbjct: 147 FMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMI 206
Query: 256 ASVVSAC--------------ASLAAFKEGLQIHARLMRCEKLRN--------DLVLGNA 293
V A LA++K + + + RN D+ N
Sbjct: 207 QGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNL 266
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
++ K G+++ A+ FDRM RNV S ++ GY K V +AR +F +M E+N+V+W
Sbjct: 267 MISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAW 326
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+ +I GY + G +L L++ K + + P +++AC+ L V
Sbjct: 327 STMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVG 386
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
L ++ V SLIDMY KCG++E ++FE + ++D ++ +I A +G
Sbjct: 387 PSLF------PNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLS 440
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
+A+ LF +M KPD V +GVL AC+H GLV EGR+ F M E+G+ P + HY C
Sbjct: 441 EDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYAC 500
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
MVD+LGRAGCL+EA +LI +MP+ P+A +WG+LL+AC+VH N+ L E A +L +IEP+N
Sbjct: 501 MVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNN 560
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
SG YVLL N+YA+ G+W + +VR ++R+ V K G SWIE+ ++ F++ DK H +
Sbjct: 561 SGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDS 620
Query: 654 KEIYLVLKMLTREM 667
+ I+ +L++L ++M
Sbjct: 621 ERIFFMLELLCKDM 634
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/639 (32%), Positives = 344/639 (53%), Gaps = 70/639 (10%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H +IK + + + N L+D Y K CLY A
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA-------------------------- 194
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
S+LF M +D ++NS+++G++ EA+ F+++H+ S+++F + LS
Sbjct: 195 -----SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLS 249
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A G D K G QVH + K+ + +V++G+AL+D Y K +V ++F M E + +S
Sbjct: 250 AAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGIS 309
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
+N +IT Y NG ++ ++F ++ + + + A+++S S + G QIH
Sbjct: 310 YNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH---- 365
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
C+ + G E+R E ++V YAK + K A+
Sbjct: 366 -CQAI---------------TVGANFESRV------------ENALVDMYAKCNGDKEAQ 397
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + ++ V W A+I+ Y Q G++EE + +F ++R V TF ++L ACANLA
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ LGRQ H+ +++ SG S+++ G++L+D Y KCG + D + F M ER+ VS
Sbjct: 458 SISLGRQLHSLLIR------SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
WNA+I AQNG L F++M+ G KPD V+ + VL ACSH G VEE +F+SM+
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+ + + P ++HYT MVD+L R G DEA+ L+ MP +P ++W S+L +C++H+N L
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 580 EYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
+ A +L +E ++ PY+ +SN+YA G+W V +V+K MR RGV K P SW+EI
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+VF DK HP K+I + L++EM++ GY P+ +
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 260/552 (47%), Gaps = 40/552 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L +S S++ + A I+K+ F N ++ + + G L A +VFD+M KN
Sbjct: 14 LRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKN 73
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ N +I+G LK+G + A LF M ER SW ++ G+ Q ++ EA + M
Sbjct: 74 TISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRR 133
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + LS + Q+H + K Y ++ + ++L+D Y K +
Sbjct: 134 GGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYL 193
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A ++F M ++ V++NSL+T Y G +A+E+F+ + SGI+P + T A+++SA
Sbjct: 194 ASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVG 253
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L K G Q+H +++ + N V GNAL+D Y+K +++E +F MP
Sbjct: 254 LDDTKFGQQVHGFVLKTNFVWNVFV-GNALLDYYSKHDQVDEVGKLFYEMP--------- 303
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
E + +S+N +I Y NG+ +E+ LFR L+
Sbjct: 304 ----------------------ELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ F LL+ + +L++GRQ H + G F S E N+L+DMY KC ++
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE------NALVDMYAKCNGDKE 395
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+IF+ + + V W AMI Q G E + +F M G D T +L AC++
Sbjct: 396 AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACAN 455
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+ GR+ S + + ++ + + ++D + GC+ +A MP + ++V W
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSG-SALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWN 513
Query: 565 SLLAACKVHRNI 576
+L++A + N+
Sbjct: 514 ALISAYAQNGNV 525
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 192/375 (51%), Gaps = 43/375 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA LL + + ++VH ++K+ F +F+ N L+D Y+K D+
Sbjct: 244 FAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK----------HDQ-- 291
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+D+ +LF MPE D S+N +++ +A + +F E+ F K
Sbjct: 292 -------------------VDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRK 332
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVH--ALLSKSRYSSDVYMGSALIDMYGKC 199
+ F ++ F + LS S++ +MG Q+H A+ + + S V +AL+DMY KC
Sbjct: 333 LQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV--ENALVDMYAKC 390
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
A+++FD + ++ V W ++I+ Y Q G + + VF M +G+ D+ T AS++
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA+LA+ G Q+H+ L+R + N + G+AL+D YAKCG + +A F MP RN
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSN-VYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRL 375
VS +++S YA+ +V F +M++ + VS+ ++++ + G EEAL F
Sbjct: 510 VSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNS 569
Query: 376 LKR-ESVCPT--HYT 387
+ + V P HYT
Sbjct: 570 MTQIYEVTPKREHYT 584
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%), Gaps = 31/296 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA LL S ++ R++H + I E ++N L+D+YAKC A+K+FD +
Sbjct: 344 PFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNI 403
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ K+ W +M+S + Q + E + F
Sbjct: 404 ACKSTVPW-------------------------------TAMISAYVQKGKHEEGINVFS 432
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + +F S L ACA +G Q+H+LL +S + S+VY GSAL+D Y KCG
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A + F M ERN VSWN+LI+ Y QNG L F +M+ SG +PD V+ SV+S
Sbjct: 493 CMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLS 552
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ +E L + + ++ ++VD+ + G+ +EA + MP
Sbjct: 553 ACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF 608
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 45/216 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + FA +L +C S+S R++H+ +I+S F S ++ + L+D YAKCGC+ A K F
Sbjct: 442 DQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSF 501
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +N +WN++I S +AQ+ L
Sbjct: 502 GEMPERNSVSWNALI-------------------------------SAYAQNGNVDGTLN 530
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M + SF S LSAC+ G V+ F TQ++ + K + +
Sbjct: 531 SFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHY------T 584
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+++D+ + GR A ++ M E + + W+S++
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLN 620
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 327/592 (55%), Gaps = 62/592 (10%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY--SFGSALSACAGSVDFKMGTQVHA 175
SW + A +F A+ F++M + S S +AL +CAG + +HA
Sbjct: 331 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 390
Query: 176 LLSKSRYSSDVYMGSALIDM----------------YGKCGRVSCA----RRVFDGMRER 215
L +S +D + +AL+++ G+ G S A R+VFD M ER
Sbjct: 391 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 450
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ VSWN+LI ++ +AL + M G PD TL++V+ A A K G+ +H
Sbjct: 451 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 510
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++ ND+ +G++L+DMYA C +++ + VFD
Sbjct: 511 GYAIK-NGFDNDVFVGSSLIDMYANCTQMDYSMKVFD----------------------- 546
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+ + V WN+++AGY QNG EEALG+FR + + V P TF +L+ A
Sbjct: 547 --------SFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAF 598
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
NL+ L+LG+Q H ++++ RF +IF+ +SLIDMY KCG+V+ R+F +
Sbjct: 599 GNLSLLRLGKQLHAYLIR--ARF----NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSP 652
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW AMI+G A +G TEA LF++M L KP+H+T + VL ACSHAGLV+ G KYF
Sbjct: 653 DIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYF 712
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+SMS ++G P +H + D LGRAG LDEA I M ++P + +W +LL AC+VH+N
Sbjct: 713 NSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKN 772
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+L E VAKK+ E+EP + G +V+LSNMY+ GRW E ++RK MR +G+ K+P CSWIE
Sbjct: 773 TVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIE 832
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD--DEAYEEQ 685
+ ++VF+ DK HP I L + + +M R GYVPN D + EEQ
Sbjct: 833 VKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQ 884
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 190/369 (51%), Gaps = 23/369 (6%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA I+S ++ F N L+++ C L G F G L+
Sbjct: 388 LHALAIRSGSFADRFTANALLNL---CIKLPGFHHPFGTNGPSG--------EGGLESAA 436
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ ++F M ERD SWN+++ G A+H R EAL +M + F ++ + L
Sbjct: 437 YESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPI 496
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A D K G VH K+ + +DV++GS+LIDMY C ++ + +VFD + + V W
Sbjct: 497 FAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLW 556
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS++ Y QNG +AL +F RM+ +G+ P VT +S++ A +L+ + G Q+HA L+R
Sbjct: 557 NSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIR 616
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +++ + ++L+DMY KCG ++ AR VF+ + ++VS T+M+ GYA A +
Sbjct: 617 A-RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFV 675
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
+F +M ++ N +++ A++ + G + F + + Y F L CA
Sbjct: 676 LFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQ------YGFVPSLEHCA 729
Query: 397 NLADLQLGR 405
LAD LGR
Sbjct: 730 ALAD-TLGR 737
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/709 (31%), Positives = 351/709 (49%), Gaps = 88/709 (12%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ G DS ++ L +C R + +H +IK F +++++ L++ Y +C
Sbjct: 663 KELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC 722
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
WG ++ A+++F MP + WN +
Sbjct: 723 ------------------------------WG-LEKANQVFHEMPNPEALLWNEAIILNL 751
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q ++ + + F KM + L AC Q+H + + SDV
Sbjct: 752 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVS 811
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA----------- 236
+ + LI MY K G++ ARRVFD M RN SWNS+I+ Y G +DA
Sbjct: 812 LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 871
Query: 237 ------------------------LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
L + RM G +P+ ++ SV+ A + L G
Sbjct: 872 MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGK 931
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+ H ++R D+ +G +L+DMY K L A+ VFD M RN+ + S+VSGY+
Sbjct: 932 ETHGYVLR-NGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFK 990
Query: 333 SSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+ A + +M ++ ++V+WN +I+GY G R++ P +
Sbjct: 991 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG-----------CARKAFMPNSASI 1039
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
LL ACA+L+ LQ G++ H +++G D+FV +LIDMY K S+++ ++
Sbjct: 1040 TCLLRACASLSLLQKGKEIHCLSIRNGFI------EDVFVATALIDMYSKSSSLKNAHKV 1093
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F + + SWN MI+G A G G EA+ +F +M G PD +T +L AC ++GL+
Sbjct: 1094 FRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLI 1153
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG KYF SM ++ + P +HY CMVDLLGRAG LDEA LI MP++PDA IWG+LL
Sbjct: 1154 GEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLG 1213
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+C++H+N+ E AK L ++EP+NS Y+L+ N+Y+ RW ++ +R+LM GV +
Sbjct: 1214 SCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNR 1273
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SWI+I V+VF +K HP +IY L L EMK++GYVP+ +
Sbjct: 1274 QVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVN 1322
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 170/628 (27%), Positives = 288/628 (45%), Gaps = 98/628 (15%)
Query: 26 LDSCLRSKSVSDTRR--------VHARIIKSQFASEIFIQNRLIDVY---AKCGCLYGAR 74
L S R +VS+TR + A ++ S + + +DV+ CG L GA
Sbjct: 537 LKSSARIGAVSNTRMSRAMEVLIIKALVVDSPSRASTGAISAGVDVFRFNTTCGML-GAL 595
Query: 75 KVFDKMSNKNVFTWN------SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF-A 127
V K+ K WN ++I+ L +G A+ +F R+ WNS V F +
Sbjct: 596 -VMIKLPQK----WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKS 650
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
L F ++H + + AL C +D +G ++H L K + DVY
Sbjct: 651 SAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVY 710
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ AL++ YG+C + A +VF M + WN I Q+ +E+F +M S
Sbjct: 711 LRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSF 770
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++ + T+ V+ AC + A QIH + R L +D+ L N L+ MY+K GKL A
Sbjct: 771 LKAETATIVRVLQACGKMGALNAAKQIHGYVFRF-GLDSDVSLCNPLISMYSKNGKLELA 829
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQN 363
R VFD M RN S SM+S YA + A +F ++ ++ ++V+WN L++G+ +
Sbjct: 830 RRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLH 889
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G EE L + + ++ E P + ++L A + L L +G++ H +V+++G +
Sbjct: 890 GYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF------D 943
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
D++VG SLIDMY+K S+ +F+ M R+ +WN+++ G + G +AL L +M
Sbjct: 944 CDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM 1003
Query: 484 LLCGEKPDHVTMIG------------------------VLCACSHAGLVEEGRKYFSSMS 519
G KPD VT G +L AC+ L+++G++ +S
Sbjct: 1004 EKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKE-IHCLS 1062
Query: 520 KEHGLAPLKDHY--TCMVDLLGRAGCLDEA---------KTL------------------ 550
+G ++D + T ++D+ ++ L A KTL
Sbjct: 1063 IRNGF--IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKE 1120
Query: 551 -------IEAMPMQPDAVIWGSLLAACK 571
++ + + PDA+ + +LL+ACK
Sbjct: 1121 AISVFNEMQKVGVGPDAITFTALLSACK 1148
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/569 (37%), Positives = 318/569 (55%), Gaps = 16/569 (2%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A R+F +P+ D+ ++NS++ ++ EAL + +E++ L AC+
Sbjct: 60 ARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSR 119
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM-RERNIVSWNS 222
+ + H + K Y V++G+AL+ G + +RR+F M RN+VSWN+
Sbjct: 120 ARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNT 179
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Q G S+A +F M G+ D T S++ C+ KEG RL+ C
Sbjct: 180 MIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCS-----KEGNLEVGRLVHCH 234
Query: 283 KL----RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
L R DL+LGNALVDMY KCG L A FD MPI+NVVS TSM+ AK SV +A
Sbjct: 235 MLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAA 294
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R F +M ERN++SWNA+I+ Y Q G E LGL+ +K + P T +L+
Sbjct: 295 RDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQN 354
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
DL GR H ++ S + + V NSLIDMY +CG V+ +F M ++ +
Sbjct: 355 GDLASGRMIHCYIQD------SFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTI 408
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN +I A +G EA+ F+ M+ PD +T +G+L ACSH GL+E+G+ YF +M
Sbjct: 409 SWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAM 468
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ + P +HY CMVDLLGR G L +A LI+ MPM+PD V+WG+L+ AC++H ++ +
Sbjct: 469 RHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEI 528
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ K+LLE+E N G +VL+SN+ E +W ++ R+RKLMR RG K G S IEI
Sbjct: 529 GKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINN 588
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
++ F V+D RH + +IY + L +
Sbjct: 589 SIHEFGVEDIRHESSSQIYAAVDQLAYHL 617
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 169/332 (50%), Gaps = 3/332 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F LL C + ++ R VH ++ S ++ + N L+D+Y KCG L+ A + F
Sbjct: 208 DVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCF 267
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M KNV +W S++ L K G +D A F MPER+ SWN+M+S + Q RF E LG
Sbjct: 268 DVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLG 327
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M S E + LS + D G +H + S V + ++LIDMY
Sbjct: 328 LYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYA 387
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG+V + +F M +N +SWN +I +G A +A+ F M++ PDE+T
Sbjct: 388 RCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVG 447
Query: 258 VVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++SAC+ ++G Q + + MR ++ ++ +VD+ + G L +A + MP+
Sbjct: 448 LLSACSHGGLLEDG-QYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPM 506
Query: 317 R-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ +VV +++ V+ +L ++LE
Sbjct: 507 KPDVVVWGALIGACRIHGHVEIGKLAIKQLLE 538
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 209/485 (43%), Gaps = 103/485 (21%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF +L +C R+++ H IK + ++F+ N L+ A G L +R++F +M
Sbjct: 111 PF--VLKACSRARAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEM 168
Query: 81 S-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ ++NV +WN++I G AQ SEA F
Sbjct: 169 APHRNVVSWNTMI-------------------------------GGCAQAGETSEACALF 197
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M + ++F S L C+ + ++G VH + S D+ +G+AL+DMYGKC
Sbjct: 198 REMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKC 257
Query: 200 GRVSCARRVFD-------------------------------GMRERNIVSWNSLITCYE 228
G + A R FD M ERNI+SWN++I+CY
Sbjct: 258 GDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYV 317
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q G + L ++ RM + G+ PDEVTLA V+S G IH +
Sbjct: 318 QGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVT 377
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
VL N+L+DMYA+CG+++ + +F MP +N
Sbjct: 378 VL-NSLIDMYARCGQVDTSISLFTEMPNKN------------------------------ 406
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+SWN +I +G +EA+ FR + ++ P TF LL+AC++ L+ G+
Sbjct: 407 -TISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYF 465
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+R + + ++ ++D+ + G + + + M ++ D V W A+I C
Sbjct: 466 K-----AMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGAC 520
Query: 468 AQNGY 472
+G+
Sbjct: 521 RIHGH 525
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 14/312 (4%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ +V+ +SG A ++ AR MF ++ + + ++N+LI Y+ +G +EAL L R
Sbjct: 38 VPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRD 97
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ R + P +T +L AC+ R A + HG+ G +FVGN+L+
Sbjct: 98 VLRRGILPNEFTLPFVLKACSR------ARAAEHALATHGVAIKLGYVRQVFVGNALLHS 151
Query: 436 YMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
GS+ D R+F M R+ VSWN MI GCAQ G +EA LF++M G D T
Sbjct: 152 SASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFT 211
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +L CS G +E GR M L +VD+ G+ G L A + M
Sbjct: 212 FVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILG-NALVDMYGKCGDLWMAHRCFDVM 270
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYAELGRWGEV 613
P++ + V W S+L A H ++ A+ E P N + + + Y + GR+ E
Sbjct: 271 PIK-NVVSWTSMLCALAKHGSV----DAARDWFEQMPERNIISWNAMISCYVQGGRFPET 325
Query: 614 VRVRKLMRKRGV 625
+ + M+ G+
Sbjct: 326 LGLYNRMKSLGL 337
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/458 (42%), Positives = 286/458 (62%), Gaps = 7/458 (1%)
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WNS + + DA+ +F R+ + PD T +SV+ AC +L G +H +
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ R++L L N +V +YA CG++ EAR +F++MP R+VV+ M++ K + A
Sbjct: 156 KV-GFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAY 214
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F++M ERNV SW ++IAGY Q G+ +EA+ LF ++ V T +L ACA+L
Sbjct: 215 DLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLG 274
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
L LG + H + +HG + ++ + N+LIDMY+KCG +E+ C++FE M ER VS
Sbjct: 275 ALDLGMRIHEYSNRHGFK------RNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVS 328
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W+AMI G A +G EAL LF M G +P+ VT IG+L ACSH GL+ EGR++F+SM+
Sbjct: 329 WSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMT 388
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+++G+ P +HY CMVDLL RAG L EA I MPM+P+ V+WG+LL AC+VH+N+ +
Sbjct: 389 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 448
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
E K LLE++P N G YV+LSN+YAE GRW + RVRK M+ R V K PG S I + G
Sbjct: 449 EEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGV 508
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+ F+ ++ HP ++I+ + L EM+ GYVPN S
Sbjct: 509 VHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTS 546
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 167/300 (55%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +CL +S+ R +H + K F S +++QN ++ +YA CG + AR +F
Sbjct: 127 DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLF 186
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM ++V TWN +I L+K G + A LF+ MPER+ SW SM++G+ Q + EA+
Sbjct: 187 EKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIH 246
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM +E + + L+ACA +G ++H ++ + +V + + LIDMY
Sbjct: 247 LFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYV 306
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +VF+ M ER +VSW+++I +G A +AL +F M GIEP+ VT
Sbjct: 307 KCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIG 366
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC+ + EG + A + R + + +VD+ ++ G L+EA MP++
Sbjct: 367 LLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK 426
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 198/463 (42%), Gaps = 98/463 (21%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
+ R+VHA+IIK+ I R+ V A + A+++F + + T+
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETF-------- 94
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
WNS + A+ D +A+ F ++ + ++ S
Sbjct: 95 ---------------------VWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSS 133
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L AC +D G +H ++ K + S++Y+ + ++ +Y CG + AR +F+ M +R+
Sbjct: 134 VLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRD 193
Query: 217 IVSWN-------------------------------SLITCYEQNGPASDALEVFVRMMA 245
+V+WN S+I Y Q G A +A+ +F +M
Sbjct: 194 VVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEE 253
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G++ +EVT+ +V++ACA L A G++IH R + ++ + N L+DMY KCG L
Sbjct: 254 AGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKCGCLE 312
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
EA VF+ M R VVS ++M+ G A +G
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLA-------------------------------MHGR 341
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EEAL LF + + + P TF LL+AC+++ + GR+ + + G
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD-----YGIIPQ 396
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I ++D+ + G + + M ++ + V W A++ C
Sbjct: 397 IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGAC 439
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/658 (33%), Positives = 355/658 (53%), Gaps = 69/658 (10%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S ++V D+S + +L +C +S +++ +HA +K+ S +F+ + L+D+Y
Sbjct: 89 SAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYK 148
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ G + + +VF +M +N TW +IITGL+ G
Sbjct: 149 RVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAG-------------------------- 182
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
R+ E L YF +M S ++F AL ACAG K G Q+H + + +
Sbjct: 183 -----RYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDAT 237
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
V++ ++L MY +CG + +F+ M ER++VSW SLI Y + G A+E F++M
Sbjct: 238 VWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRN 297
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
S + P+E T A++ SACASL+ G Q+H + L + L + N+++ MY+ CGKL+
Sbjct: 298 SQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSL-GLNDSLSVSNSMMKMYSTCGKLD 356
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A +F M R+++S ++++ GY++A G
Sbjct: 357 SASVLFQGMRCRDIISWSTIIGGYSQA-------------------------------GF 385
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EEA F +++ PT + +LL+ N+A L+ GRQ H L F G E +
Sbjct: 386 GEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV------HALAFCFGLEQN 439
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
V ++LI+MY KCG++++ +IFE D VS AMI G A++G EA+ LF+K L
Sbjct: 440 STVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 499
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G PD VT I VL AC+H+G ++ G YF+ M +++ + P K+HY CMVDLL RAG L
Sbjct: 500 VGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLS 559
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EA+ +I+ M + D V+W +LL ACK +I G A+++LE++P+ + V L+N+Y+
Sbjct: 560 EAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 619
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
G E VRK M+ +GV+K+PG S I+I V+ F+ D+ HPL+++IY +L+++
Sbjct: 620 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPLSEDIYNILELV 677
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 218/470 (46%), Gaps = 41/470 (8%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
F NS + L+ G + A ++F MP RD SW +++ G+ + EA+ F M
Sbjct: 34 TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93
Query: 145 ENFALSEYS--FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ A+S + L AC S + G +HA K+ S V++GS+L+DMY + G++
Sbjct: 94 VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKI 153
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
+ RVF M RN V+W ++IT G + L F M +S D T A + AC
Sbjct: 154 EKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKAC 213
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A L K G QIH ++ + + N+L MY +CG++ + C+F+ M R+VVS
Sbjct: 214 AGLRQVKYGKQIHTHVI-VRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSW 272
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
TS LI Y + G E+A+ F ++ V
Sbjct: 273 TS-------------------------------LIVAYNRIGHEEKAVETFIKMRNSQVP 301
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P TF + +ACA+L+ L G Q H +V GL + V NS++ MY CG +
Sbjct: 302 PNEQTFATMFSACASLSRLVWGEQLHCNVFSLGL------NDSLSVSNSMMKMYSTCGKL 355
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ +F+ M RD +SW+ +I G +Q G+G EA F M G KP + +L
Sbjct: 356 DSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVS 415
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+ ++E GR+ +++ GL + ++++ + G + EA + E
Sbjct: 416 GNMAVLEGGRQ-VHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFE 464
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 15/287 (5%)
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK--RESVCPTHYTFG 389
A +++ AR +F KM R++VSW A+I GY ++EA+ LF ++ +V P
Sbjct: 47 AGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVS 106
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+L AC +++ G H + VK L S +FVG+SL+DMY + G +E CR+F
Sbjct: 107 VVLKACGQSSNIAYGESLHAYAVKTSLL------SSVFVGSSLLDMYKRVGKIEKSCRVF 160
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
M R+ V+W A+I G G E L F +M E D T L AC+ V+
Sbjct: 161 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVK 220
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G++ + + G + + G + + L E M + D V W SL+ A
Sbjct: 221 YGKQIHTHVIV-RGFDATVWVANSLATMYTECGEMRDGLCLFENMS-ERDVVSWTSLIVA 278
Query: 570 CKV--HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR--WGE 612
H + ++ + ++ P N + + + A L R WGE
Sbjct: 279 YNRIGHEEKAVETFIKMRNSQV-PPNEQTFATMFSACASLSRLVWGE 324
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
F NS + + G++ ++F+ M RD VSW A+I G EA+ LF M +
Sbjct: 35 FDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVV 94
Query: 487 GE--KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCL 544
PD + VL AC + + G + K L+ + + ++D+ R G +
Sbjct: 95 DPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVG-SSLLDMYKRVGKI 153
Query: 545 DEAKTLIEAMPMQPDAVIWGSLLA 568
+++ + MP + +AV W +++
Sbjct: 154 EKSCRVFSEMPFR-NAVTWTAIIT 176
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/677 (32%), Positives = 350/677 (51%), Gaps = 77/677 (11%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
T + HARI+KS ++ +I +LI Y SN N F
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASY----------------SNYNCF----------- 66
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+DA + S+P+ S++S++ + FS+++G F +M S + +
Sbjct: 67 ----NDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNL 122
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-- 215
CA FK G Q+H + S D ++ +L MY +CGR+ AR+VFD M E+
Sbjct: 123 FKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDV 182
Query: 216 ---------------------------------NIVSWNSLITCYEQNGPASDALEVFVR 242
NIVSWN +++ + ++G +A+ +F +
Sbjct: 183 VTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQK 242
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M G PD+VT++SV+ + G QIH +++ L++ V+ +A++DMY K G
Sbjct: 243 MHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVI-SAMLDMYGKSG 301
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF----TKMLERNVVSWNALIA 358
+ +FD + + ++G ++ V A MF + +E NVVSW ++IA
Sbjct: 302 HVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIA 361
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G QNG++ EAL LFR ++ V P T ++L AC N+A L GR H V+ L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL- 420
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
D+ VG++LIDMY KCG ++ +F M ++ V WN+++ G + +G E +
Sbjct: 421 -----DDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMS 475
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F+ ++ KPD ++ +L AC GL +EG KYF+ MS+E+G+ P +HY+CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLL 535
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EA LI+ +P +PD+ +WG+LL +C++ N+ L E A+KL +EP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYV 595
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
L+SN+YA G W EV +R M G+ K PGCSWI++ V + DK HP +I
Sbjct: 596 LMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITE 655
Query: 659 VLKMLTREMKRVGYVPN 675
+ ++ EM++ G+ PN
Sbjct: 656 KMDEISEEMRKSGHRPN 672
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 206/429 (48%), Gaps = 45/429 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ L C + +++H S + F+Q L +Y +CG + ARKVF
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVF 174
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D+MS K+V T ++++ G + G +++ R+ + M E + SWN ++SGF +
Sbjct: 175 DRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHK 234
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ F KMH F + + S L + S + MG Q+H + K D + SA++
Sbjct: 235 EAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAML 294
Query: 194 DMYGKCGRVSCARRVFDGMR-----------------------------------ERNIV 218
DMYGK G V ++FD E N+V
Sbjct: 295 DMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I QNG +ALE+F M +G++P+ VT+ S++ AC ++AA G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R L +D+ +G+AL+DMYAKCG++ ++ VF+ MP +N+V S+++GY+ K
Sbjct: 415 VRVH-LLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEV 473
Query: 339 RLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHYTFGNLLN 393
+F + L+ + +S+ +L++ Q G +E F ++ E + P + ++N
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVN 533
Query: 394 ACANLADLQ 402
LQ
Sbjct: 534 LLGRAGKLQ 542
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 300/492 (60%), Gaps = 43/492 (8%)
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+++ + LI+MY K ++ A ++FD M +RN++SW ++I+ Y + ALE+ V M+
Sbjct: 48 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G+ P+ T +SV+ AC ++ + +H +++ E L +D+ + +AL+D++AK G+
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDVR---MLHCGIIK-EGLESDVYVRSALIDVFAKLGEPE 163
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A VFD MV+G + + WN++I G+ QN
Sbjct: 164 DALSVFD-----------EMVTG--------------------DAIVWNSIIGGFAQNSR 192
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
++ AL LF+ +KR T ++L AC LA L+LG QAH H+VK+ + D
Sbjct: 193 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--------DQD 244
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ + N+L+DMY KCGS+ED R+F M ERD ++W+ MI G AQNGY EAL LF+ M
Sbjct: 245 LILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKS 304
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KP+++T++GVL ACSHAGL+E+G YF SM K +G+ P ++HY CM+DLLG+AG LD
Sbjct: 305 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLD 364
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A L+ M +PDAV W +LL AC+V RN++L EY AKK++ ++P ++G Y +LSN+YA
Sbjct: 365 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYA 424
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+W V +RK MR G+ K+PGCSWIE+ ++ F++ D+ HP E+ L L
Sbjct: 425 NSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIH 484
Query: 666 EMKRVGYVPNAS 677
+ +GYVP +
Sbjct: 485 RLIGIGYVPETN 496
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 198/385 (51%), Gaps = 45/385 (11%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+F N +I +K+ ++DA +LF MP+R+ SW +M+S +++ +AL V M
Sbjct: 48 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 107
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + Y++ S L AC G D +M +H + K SDVY+ SALID++ K G
Sbjct: 108 DGVRPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLGEPED 164
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A VFD M + + WNS+I + QN + ALE+F RM +G ++ TL SV+ AC
Sbjct: 165 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 224
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA + G+Q H +++ ++ DL+L NALVDMY KCG L +AR VF++M R+V++ ++
Sbjct: 225 LALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWST 281
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SG A QNG ++EAL LF L+K P
Sbjct: 282 MISGLA-------------------------------QNGYSQEALKLFELMKSSGTKPN 310
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+ T +L AC++ L+ G + K +G+ G E +ID+ K G ++
Sbjct: 311 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIN--PGREH----YGCMIDLLGKAGKLD 364
Query: 444 DGCRIFETM-VERDWVSWNAMIVGC 467
D ++ M E D V+W ++ C
Sbjct: 365 DAVKLLNEMECEPDAVTWRTLLGAC 389
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 34/295 (11%)
Query: 21 PFAKLLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
P S LR+ +SD R +H IIK S++++++ LIDV+AK G A VFD+
Sbjct: 112 PNVYTYSSVLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDE 171
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
++TG D WNS++ GFAQ+ R AL F
Sbjct: 172 -----------MVTG--------------------DAIVWNSIIGGFAQNSRSDVALELF 200
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M F + + S L AC G ++G Q H + K Y D+ + +AL+DMY KC
Sbjct: 201 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 258
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + ARRVF+ M+ER++++W+++I+ QNG + +AL++F M +SG +P+ +T+ V+
Sbjct: 259 GSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVL 318
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AC+ ++G + + + ++D+ K GKL++A + + M
Sbjct: 319 FACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEM 373
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/671 (33%), Positives = 362/671 (53%), Gaps = 75/671 (11%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V S++ +KW + D ++F +MP+R+ +W S+++G+ Q S+ + F +M
Sbjct: 138 DVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMR 197
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+E + +F S LS A +G +VHA K S V++ ++L++MY KCG V
Sbjct: 198 AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVE 257
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR VF GM R++VSWN+L+ NG +AL++F +S + T A+V+ CA
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 264 SL-----------AAFKEGLQIHARLM--------RCEKLRN------------DLVLGN 292
++ + K G + +M + +L N ++V
Sbjct: 318 NIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWT 377
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSE------------------------------ 322
A+++ + G + A +F RM V
Sbjct: 378 AMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQVIKTNYEC 437
Query: 323 -----TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
T++++ Y+K + + A +F + +++VVSW+A++ Y Q G+++ A +F +
Sbjct: 438 TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497
Query: 378 RESVCPTHYTFGNLLNACAN-LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P +T ++++ACA+ A + LGRQ H +KH + V ++L+ MY
Sbjct: 498 MHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRC------HDALCVSSALVSMY 551
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+ GS+E IFE +RD VSWN+M+ G AQ+GY +AL +F++M G + D VT +
Sbjct: 552 ARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFL 611
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
V+ C+HAGLVEEG++YF SM++++G+ P +HY CMVDL RAG LDEA +LIE M
Sbjct: 612 SVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF 671
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
++W +LL ACKVH+N+ LG+ A+KLL +EP +S YVLLSN+Y+ G+W E V
Sbjct: 672 PAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEV 731
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RKLM + V K+ GCSWI+I V+ F+ DK HPL+++IY L+ +T ++K+ GY P+
Sbjct: 732 RKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDT 791
Query: 677 SD--DEAYEEQ 685
S E EEQ
Sbjct: 792 SFALHEVAEEQ 802
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 222/477 (46%), Gaps = 69/477 (14%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS-ENFALSEYSFGSALSACA 162
A + F +P R+ + + + A+ +AL +F+ +H + + L C
Sbjct: 57 ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 163 GSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
D +G Q+H L + + DV +G++L+DMY K V R+VF+ M +RN+V+W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR- 280
SL+T Y Q+G SD +E+F RM A G+ P+ VT ASV+S AS G ++HA+ ++
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKF 234
Query: 281 --CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
C + + + N+L++MYAKCG + EAR VF M ET
Sbjct: 235 GCC----STVFVCNSLMNMYAKCGLVEEARVVFCGM-------ET--------------- 268
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R++VSWN L+AG NG + EAL LF + T T+ ++ CAN+
Sbjct: 269 ---------RDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANI 319
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERDW 457
L L RQ H+ V+K G V +L+D Y K G + + IF M ++
Sbjct: 320 KQLGLARQLHSSVLKRGFHSYGN------VMTALMDAYSKAGQLGNALDIFLLMSGSQNV 373
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSW AMI GC QNG A LF +M G P+ T +L A +S
Sbjct: 374 VSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTAS------------VAS 421
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRA-------GCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ + +K +Y C ++G A C E I M Q D V W ++L
Sbjct: 422 LPPQIHAQVIKTNYEC-TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAML 477
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 86/447 (19%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ L S +A ++ C K + R++H+ ++K F S + L+D Y+K G L A
Sbjct: 301 ITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNA 360
Query: 74 RKVFDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
+F MS ++NV +W ++I G ++ G + A+ LF+ M E
Sbjct: 361 LDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRE------------------- 401
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+ A +++++ + L+A S + Q+HA + K+ Y +G+AL
Sbjct: 402 ------------DGVAPNDFTYSTILTASVAS----LPPQIHAQVIKTNYECTSIVGTAL 445
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ Y K A +F + ++++VSW++++TCY Q G + A +F++M G++P+E
Sbjct: 446 LASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNE 505
Query: 253 VTLASVVSACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T++SV+ ACAS A G Q HA ++ + + L + +ALV MYA+ G + A+C+F
Sbjct: 506 FTISSVIDACASPTAGVDLGRQFHAISIK-HRCHDALCVSSALVSMYARKGSIESAQCIF 564
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+R R++VS SM+SGYA Q+G +++AL
Sbjct: 565 ERQTDRDLVSWNSMLSGYA-------------------------------QHGYSQKALD 593
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+FR ++ E + TF +++ C AH +V+ G R+ D + +
Sbjct: 594 VFRQMEAEGIEMDGVTFLSVIMGC-----------AHAGLVEEGQRYFDSMARDYGITPT 642
Query: 432 ------LIDMYMKCGSVEDGCRIFETM 452
++D+Y + G +++ + E M
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGM 669
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 180/406 (44%), Gaps = 43/406 (10%)
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACA 263
AR+ FD + RN + + + + + G AL+ F+ + G L V+ C
Sbjct: 57 ARQAFDEIPHRNTL--DHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S+ G Q+H +RC R D+ +G +LVDM
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDM-------------------------- 148
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
Y K SV R +F M +RNVV+W +L+ GY Q+G + + LF ++ E V P
Sbjct: 149 -----YMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWP 203
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
TF ++L+ A+ + LGR+ H VK G S +FV NSL++MY KCG VE
Sbjct: 204 NSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCC------STVFVCNSLMNMYAKCGLVE 257
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ +F M RD VSWN ++ G NG+ EAL LF T V+ C+
Sbjct: 258 EARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
+ + R+ SS+ K G + T ++D +AG L A + M + V W
Sbjct: 318 NIKQLGLARQLHSSVLKR-GFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSW 376
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLLSNMYAEL 607
+++ C + ++ L + ++ E + P++ +L+ A L
Sbjct: 377 TAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASL 422
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 142/297 (47%), Gaps = 32/297 (10%)
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN----LLN 393
AR F ++ RN + +AL + + G +AL F + R C G +L
Sbjct: 57 ARQAFDEIPHRNTLD-HALF-DHARRGSVHQALDHFLDVHR---CHGGRVGGGALVGVLK 111
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
C ++ D LG+Q H ++ G + D+ VG SL+DMYMK SV DG ++FE M
Sbjct: 112 VCGSVPDRVLGKQLHGLCIRCG-----HDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMP 166
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+R+ V+W +++ G Q+G ++ + LF +M G P+ VT VL + G+V+ GR+
Sbjct: 167 KRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRR 226
Query: 514 YFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ K + C ++++ + G ++EA+ + M + D V W +L+A
Sbjct: 227 VHAQSVK---FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-DMVSWNTLMAG-- 280
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
++L + + L S S +L + YA V+++ +++ G+ +Q
Sbjct: 281 ----LVLNGHDLEALQLFHDSRSSITMLTQSTYA------TVIKLCANIKQLGLARQ 327
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/589 (35%), Positives = 321/589 (54%), Gaps = 38/589 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F ++I+ K+ + A ++F M ERD WN+MVSG ++ F EA+ F M
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + L A D +G + L K + S Y+ + L +Y KCG +
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR +F + + ++VS+N++I+ Y N ++ +F ++ SG ++V +S+V
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSG---EKVNSSSIVGLIP 316
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
F H L RC ++ C K N T
Sbjct: 317 VFFPFG-----HLHLTRC---------------IHGFCTKSGVVS---------NSSVST 347
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
++ + Y++ + ++SARL+F + E+++ SWNA+I+GY QNG E+A+ LF+ +++ V P
Sbjct: 348 ALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRP 407
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L+ACA L L LG+ H + + ES+IFV +LIDMY KCGS+
Sbjct: 408 NPVTVTSILSACAQLGALSLGKWVHDLINRESF------ESNIFVSTALIDMYAKCGSIT 461
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ R+F M E++ V+WNAMI G +GYG EAL LF +ML P VT + VL ACS
Sbjct: 462 EAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACS 521
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV EG + F SM +HG PL +HY CMVDLLGRAG LD+A I MP++P +W
Sbjct: 522 HAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVW 581
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL AC +H++ L + KL E++P N G YVLLSN+Y+ + E VR ++++R
Sbjct: 582 GALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRR 641
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
+ K PGC+ IE+ +++F D+ HP IY +L+ LT +M+ G+
Sbjct: 642 KLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGF 690
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 233/481 (48%), Gaps = 58/481 (12%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV------KMHSENFALSEYSF 154
ID AS LF+++P D +N ++ F+ ++ S A+ + + +NF Y+F
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFT---YAF 114
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+ ++ G + A + SD+++GSA++ Y K RV+ AR+VFDGM E
Sbjct: 115 VISGASSLGLGLLLHAHSIVA-----GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE 169
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
R+ V WN++++ +N +A+ +F M+ GI D T+A+V+ A L G+ I
Sbjct: 170 RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGI 229
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
M+ + V+ L +Y+KCG++ AR +F ++ ++VS +M+SGY +
Sbjct: 230 QCLAMKVGFHSHAYVI-TGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNE 288
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
+S+ +F ++ L++G N + +GL P + FG
Sbjct: 289 TESSVRLFKEL----------LVSGEKVN--SSSIVGLI---------PVFFPFG----- 322
Query: 395 CANLADLQLGRQAHTHVVK--HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
H H+ + HG SG S+ V +L +Y + +E +F+
Sbjct: 323 -------------HLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDES 369
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
E+ SWNAMI G AQNG +A+ LF++M C +P+ VT+ +L AC+ G + G+
Sbjct: 370 SEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGK 429
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+++E + + T ++D+ + G + EA+ L MP + +AV W ++++ +
Sbjct: 430 WVHDLINRESFESNIFVS-TALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGL 487
Query: 573 H 573
H
Sbjct: 488 H 488
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 204/461 (44%), Gaps = 74/461 (16%)
Query: 10 IVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC 69
+ G + F DS+ A +L + ++ + +K F S ++ L +Y+KCG
Sbjct: 199 VKGGIGF-DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGE 257
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
+ AR +F ++ ++ ++N++I+G + + RLF + +VSG +
Sbjct: 258 IETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKEL----------LVSG--EK 305
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSA-LSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
S +G + FG L+ C +H +KS S+ +
Sbjct: 306 VNSSSIVGLIPVF---------FPFGHLHLTRC-----------IHGFCTKSGVVSNSSV 345
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+AL +Y + + AR +FD E+++ SWN++I+ Y QNG A+ +F M +
Sbjct: 346 STALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEV 405
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
P+ VT+ S++SACA L A G +H + R E +++ + AL+DMYAKCG + EA+
Sbjct: 406 RPNPVTVTSILSACAQLGALSLGKWVHDLINR-ESFESNIFVSTALIDMYAKCGSITEAQ 464
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F MP +N V+ +M+SGY +G E
Sbjct: 465 RLFSMMPEKNAVTWNAMISGYG-------------------------------LHGYGHE 493
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIF 427
AL LF + V PT TF ++L AC++ ++ G + +V HG L +
Sbjct: 494 ALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA--- 550
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G+++ M VE W A++ C
Sbjct: 551 ---CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGAC 588
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/604 (36%), Positives = 332/604 (54%), Gaps = 52/604 (8%)
Query: 110 SMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM 169
S+PE Q F++ + F + F M ++ + + CA +
Sbjct: 41 SLPETIQI--------FSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQT 92
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR---------------- 213
G Q+H S D + S+L+ MY + + AR VFD +
Sbjct: 93 GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFAR 152
Query: 214 -------------------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
E N+VSWN +I+ + ++G DA+ +F M G++PD +
Sbjct: 153 KGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTS 212
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
++SV+ A L G+QIH +++ + L D + +AL+DMY KC +E VF+ M
Sbjct: 213 VSSVLPAVGDLDMPLMGIQIHCYVIK-QGLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFT--KMLERNVVSWNALIAGYTQNGENEEALGL 372
+V + ++V+G ++ V +A +F K ++ NVVSW ++IA +QNG++ EAL L
Sbjct: 272 DEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALEL 331
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
FR ++ E V P T LL AC N+A L G+ AH +++G+ +D++VG++L
Sbjct: 332 FREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIF------NDVYVGSAL 385
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG + F+ M R+ VSWN+++ G A +G EA+ +F+ M CG+KPDH
Sbjct: 386 IDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDH 445
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
V+ VL AC+ GL EEG YF SMS+ HG+ +HY+CMV LLGR+G L+EA +I+
Sbjct: 446 VSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIK 505
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP +PD+ +WG+LL++C+VH + LGE AK++ E+EP N G Y+LLSN+YA W E
Sbjct: 506 QMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVE 565
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V VR +MR RG+ K PG SWIEI V++ + D HP +I L LT EMK+ GY
Sbjct: 566 VDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGY 625
Query: 673 VPNA 676
VP+
Sbjct: 626 VPHT 629
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 218/489 (44%), Gaps = 77/489 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++ +C ++ +++H + S + + + L+ +Y + L AR VF
Sbjct: 73 DSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVF 132
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFS 133
DK+ V T +++I+ + G + + LF E + SWN M+SGF + +
Sbjct: 133 DKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYL 192
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFK-MGTQVHALLSKSRYSSDVYMGSAL 192
+A+ F MH E S S L A G +D MG Q+H + K D ++ SAL
Sbjct: 193 DAVLMFQNMHLEGLKPDGTSVSSVLPA-VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSAL 251
Query: 193 IDMYGKCGRVSCARRVFDGMRE---------------------------------RNIVS 219
IDMYGKC S VF+ M E N+VS
Sbjct: 252 IDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVS 311
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W S+I QNG +ALE+F M G++P+ VT+ ++ AC ++AA G H +
Sbjct: 312 WTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSL 371
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
R + ND+ +G+AL+DMYAKCG++ +R FD MP RN+VS
Sbjct: 372 R-NGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVS------------------ 412
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
WN+L+AGY +G+ EA+ +F L++R P H +F +L+AC
Sbjct: 413 -------------WNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACT--- 456
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV 458
Q G + G E+ + + ++ + + G +E+ + + M E D
Sbjct: 457 --QGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSC 514
Query: 459 SWNAMIVGC 467
W A++ C
Sbjct: 515 VWGALLSSC 523
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 349/624 (55%), Gaps = 28/624 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N I A+ G + GAR F+ M + ++N+++ G + D A LF MP RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 118 SWNSMVSGFA-QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
S+N+++SG + + +A + S F S SF S L ++
Sbjct: 81 SYNALISGLSLRRQTLPDAAA---ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ + + S + L+D GRV+ ARR+FD M +R++V+W ++++ Y Q G ++A
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--RLMRCEKLRNDLVLGNAL 294
+F DE+ +VVS A ++ + + +++ +L RN++ L
Sbjct: 194 RALF----------DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V Y + G + +A +F+ MP V + +M+ G+ + V +A+ +F KM ER+ +W+
Sbjct: 244 VG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I Y QN EAL FR + V P + + ++L CA LA L GR+ H +++
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
+ D+F ++LI MY+KCG+++ R+F T +D V WN+MI G AQ+G G
Sbjct: 363 SF------DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+ALG+F M L G PD +T IG L ACS+ G V+EGR+ F+SM+ + P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
VDLLGR+G ++EA LI+ MP++PDAVIWG+L+ AC++HRN + E+ AKKLLE+EP N+
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNA 536
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK-RHPLN 653
GPYVLLS++Y +GRW + ++RK + R + K PGCSWIE V++F D HP +
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS 677
I +L+ L + GY + S
Sbjct: 597 AAILRILEKLDGLLMESGYSADGS 620
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 218/467 (46%), Gaps = 74/467 (15%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR +++ D A I F + L+ Y + G L A ++F +M +N ++
Sbjct: 91 LRRQTLPDAAAALASI---PFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYT 147
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
++ GLL G +++A RLF MP+RD +W +M+SG+ Q R +EA F +M N
Sbjct: 148 VLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV- 206
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS------------------------- 184
S+ + +S A + + + ++ ++ + S
Sbjct: 207 ---SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
Query: 185 --DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
V +A++ +G+ G V A+ VF+ M ER+ +W+++I YEQN +AL F
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ G+ P+ ++ S+++ CA+LA G ++HA ++RC D+ +AL+ MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSALITMYIKCG 382
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L++A+ VF +++V SM++GYA Q
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYA-------------------------------Q 411
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSG 421
+G E+ALG+F ++ + P T+ L AC+ ++ GR+ ++ V +R G
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIR--PG 469
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
E + ++D+ + G VE+ + + M VE D V W A++ C
Sbjct: 470 AEHY----SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/606 (35%), Positives = 327/606 (53%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M G A AL +V M S + Y+F L +CA
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY--------------------------- 196
K G Q+H + K Y D+Y+ ++LI MY
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 197 ----GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
G + AR +FD + +++VSWN++I+ Y + G +ALE+F MM + + PDE
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+ +V+SA A + + G Q+H+ + ++L + NAL+D Y+KCG++
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIAD-HGFGSNLKIVNALIDFYSKCGEM-------- 246
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++A +F + ++V+SWN LI GYT +EAL L
Sbjct: 247 -----------------------ETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLL 283
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L+ACA+L + +GR H ++ K L G + + SL
Sbjct: 284 FQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR----LKGVTNASSLRTSL 339
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F +M+ + +WNAMI G A +G A +F +M KPD
Sbjct: 340 IDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDD 399
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSHAG+++ GR F SM+ + + P +HY CM+DLLG +G EA+ +I
Sbjct: 400 ITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMIS 459
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
M M+PD VIW SLL ACK+H N+ LGE A+ L +IEP+N G YVLLSN+YA GRW E
Sbjct: 460 TMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNE 519
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R+R L+ +G+ K PGCS IEI V+ F++ DK HP N+EIY +L+ + ++ G+
Sbjct: 520 VARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGF 579
Query: 673 VPNASD 678
VP+ S+
Sbjct: 580 VPDTSE 585
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 230/456 (50%), Gaps = 38/456 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC + K+ + ++H ++K + ++++ LI +Y + L A KVF
Sbjct: 62 NSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVF 121
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ S+++V ++ +++TG G+I+ A +F +P +D SWN+M+SG+ + + EAL
Sbjct: 122 DRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALE 181
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N E + + +SA A S ++G QVH+ ++ + S++ + +ALID Y
Sbjct: 182 LFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYS 241
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F G+ ++++SWN LI Y +AL +F M+ SG P++VT+ S
Sbjct: 242 KCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLS 301
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + R + + N L +L+DMY+KCG + A VF+
Sbjct: 302 ILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFN---- 357
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
ML +++ +WNA+I G+ +G A +F +
Sbjct: 358 ---------------------------SMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++ + P TF LL+AC++ L LGR + H + E +ID+
Sbjct: 391 RKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMT-HNYKITPKLEH----YGCMIDLL 445
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G ++ + TM +E D V W +++ C +G
Sbjct: 446 GHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 337/610 (55%), Gaps = 71/610 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F ++ E + WN+M G A AL ++ M S Y+F L +CA
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS---- 219
S K G Q+H + K + D+Y+ ++LI MY + GR+ AR+VFD R++VS
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 220 ---------------------------WNSLITCYEQNGPASDALEVFVRMMA-SGIEPD 251
WN++I+ Y + G +ALE+F MM + + PD
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
E T+ +VVSACA + + G +H+ + ++L + NAL+D+Y+K G+
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHS-WINDHGFASNLKIVNALIDLYSKFGE-------- 272
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
V++A +F + ++V+SWN LI GYT +EAL
Sbjct: 273 -----------------------VETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALL 309
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF-VGN 430
LF+ + R P T ++L ACA+L + +GR H ++ K L G +++ +
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKK----LKGVVTNVSSLQT 365
Query: 431 SLIDMYMKCGSVEDGCRIFET-MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
SLIDMY KCG ++ ++F++ M R +WNAMI G A +G A +F +M + G +
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIE 425
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PD +T +G+L ACSH+G+++ GR F SM++ + + P +HY CM+DLLG +G EA+
Sbjct: 426 PDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEE 485
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
+I MPM+PD VIW SLL ACK+H N+ LGE AKKL++IEP NSG YVLLSN+YA GR
Sbjct: 486 MINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGR 545
Query: 610 WGEVVRVRKLMRKRGVVKQ-PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
W EV ++R L+ +G+ K+ PGCS IEI V+ F++ DK HP N+EIY +L+ + ++
Sbjct: 546 WNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLE 605
Query: 669 RVGYVPNASD 678
G+VP+ S+
Sbjct: 606 EAGFVPDTSE 615
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 237/459 (51%), Gaps = 41/459 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL SC +SK + +++H ++K F +I++ LI +YA+ G L ARKVF
Sbjct: 88 DSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVF 147
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S+++V ++ ++I G + G+I+ A +LF +P +D SWN+M+SG+ + + EAL
Sbjct: 148 DISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALE 207
Query: 138 YFVK-MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F + M N E + + +SACA S ++G VH+ ++ ++S++ + +ALID+Y
Sbjct: 208 LFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLY 267
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G V A +FDG+ ++++SWN+LI Y +AL +F M+ SG P++VT+
Sbjct: 268 SKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 327
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEK--LRNDLVLGNALVDMYAKCGKLNEARCVFD-R 313
S++ ACA L A G IH + + K + N L +L+DMYAKCG ++ A+ VFD
Sbjct: 328 SILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSS 387
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M R++ + +M+SG+A +G A +F
Sbjct: 388 MSNRSLSTWNAMISGFA-------------------------------MHGRANAAFDIF 416
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ + P TF LL+AC++ L LGR + + G E +I
Sbjct: 417 SRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEH----YGCMI 471
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
D+ G ++ + TM +E D V W +++ C +G
Sbjct: 472 DLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 510
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 336/573 (58%), Gaps = 8/573 (1%)
Query: 104 ASRLFASMPER-DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A +F+S+P + +N + ++ + ++ ++ L ++SF L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G ++H + K D ++ + +DMY CGR++ AR VFD M R++V+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y + G +A ++F M S + PDE+ L ++VSAC + I+ L+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE-N 241
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+R D L ALV MYA G ++ AR F +M +RN+ T+MVSGY+K + A+++F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ ++++V W +I+ Y ++ +EAL +F + + P + ++++ACANL L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
+ H+ + +GL ES++ + N+LI+MY KCG ++ +FE M R+ VSW++
Sbjct: 362 KAKWVHSCIHVNGL------ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MI + +G ++AL LF +M +P+ VT +GVL CSH+GLVEEG+K F+SM+ E+
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ P +HY CMVDL GRA L EA +IE+MP+ + VIWGSL++AC++H + LG++
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
AK++LE+EP + G VL+SN+YA RW +V +R++M ++ V K+ G S I+ G +
Sbjct: 536 AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHE 595
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
F++ DKRH + EIY L + ++K GYVP+
Sbjct: 596 FLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 243/489 (49%), Gaps = 64/489 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F +L + + ++ + +H K + F++ +D+YA CG + AR V
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVS--GFAQHD 130
FD+MS+++V TWN++I ++G +D+A +LF M + D+ ++VS G +
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R++ A+ F + + + + + ++ AG+ M + +S ++++ +
Sbjct: 229 RYNRAIYEF--LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS----VRNLFVST 282
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
A++ Y KCGR+ A+ +FD ++++V W ++I+ Y ++ +AL VF M SGI+P
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D V++ SV+SACA+L + +H+ + L ++L + NAL++MYAKCG L+ R V
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F++MP RNVVS +SM+ NAL + +GE +AL
Sbjct: 402 FEKMPRRNVVSWSSMI---------------------------NAL----SMHGEASDAL 430
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF +K+E+V P TF +L C +H+ +V+ G + + + +
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGC-----------SHSGLVEEGKKIFASMTDEYNITP 479
Query: 431 SL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
L +D++ + + + + E+M V + V W +++ C +G LG F
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC--RIHGELELGKFAAK 537
Query: 484 LLCGEKPDH 492
+ +PDH
Sbjct: 538 RILELEPDH 546
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/685 (34%), Positives = 367/685 (53%), Gaps = 84/685 (12%)
Query: 3 TQRSVKQIVGDLAFLD--SSPFAKLLDSCLRSKSVSDT-----RRVHARIIKSQFAS-EI 54
++ +VK VG +D + + LL S L S+S+ R VH ++++ +I
Sbjct: 357 SEEAVKIFVGTRNTVDVNADTYVVLL-SALAEYSISEEGLRIGRVVHGHMLRTGLTDLKI 415
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
+ N L+++YAKCG I+ AS++F M
Sbjct: 416 AVSNGLVNMYAKCGA-------------------------------IESASKIFQLMEAT 444
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D+ SWN+++S Q+ EA+ ++ M + S ++ S+LS+CAG G QVH
Sbjct: 445 DRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVH 504
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI-TCYEQNGPA 233
K D + + L+ MYG+CG +S +VF+ M E + VSWN+++ P
Sbjct: 505 CDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPI 564
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
S+ ++VF MM G+ P++VT ++++A + L+ + G Q+HA +M+ + D V+ NA
Sbjct: 565 SEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK-HGVMEDNVVDNA 623
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER-NVVS 352
L+ S YAK+ + S +FT M +R + +S
Sbjct: 624 LI-------------------------------SCYAKSGDMGSCEHLFTNMSDRRDAIS 652
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN++I+GY NG +EA+ L+ TF +LNACA++A L+ G + H +
Sbjct: 653 WNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGI 712
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ L ESD+ V ++L+DMY KCG V+ ++F +M +R+ SWN+MI G A++G
Sbjct: 713 RSHL------ESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGL 766
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G +A+ +F++ML E PDHVT + VL ACSHAGLVE G +YF M +HG+ P +HY+
Sbjct: 767 GRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF-EMMPDHGILPQIEHYS 825
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR---NIMLGEYVAKKLLEI 589
C++DLLGRAG +D+ K I+ MP++P+A+IW ++L AC+ + NI LG ++ LLEI
Sbjct: 826 CVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEI 885
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
EP N YVL SN +A G W + + R MR+ K+ G SW+ + V+ F+ D+
Sbjct: 886 EPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRS 945
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVP 674
HP KEIY L L + ++ GYVP
Sbjct: 946 HPNTKEIYEKLNFLIQNIRNAGYVP 970
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 154/591 (26%), Positives = 261/591 (44%), Gaps = 92/591 (15%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A LL R + +H +IK ++F+ N L++ YAK L A +VFD+M
Sbjct: 65 ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
+N +W +++G + G ++A R+F +M Q
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRP--------------------- 163
Query: 143 HSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC- 199
+ ++FG+ L AC G QVH L+SK+ Y+S+ + +ALI MYG C
Sbjct: 164 -------TSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCT 216
Query: 200 -GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG----IEPDEVT 254
G A+RVFDG R++++WN+L++ Y + G + +F M + P E T
Sbjct: 217 VGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHT 276
Query: 255 LASVVSACASLAAFKEGL-QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
S+++A + + L Q+ +++ +DL +G+ALV +A+ G +EA+ +
Sbjct: 277 FGSLITAASLSSGSSAVLDQVLVWVLK-SGCSSDLYVGSALVSAFARHGLTDEAKDI--- 332
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
F + ++N V+ N LI G + +EEA+ +F
Sbjct: 333 ----------------------------FLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF 364
Query: 374 RLLKRESVCPTHYTFGNLLNACANLA----DLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+ R +V T+ LL+A A + L++GR H H+++ GL L I V
Sbjct: 365 -VGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLK-----IAVS 418
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N L++MY KCG++E +IF+ M D +SWN +I QNG EA+ + M
Sbjct: 419 NGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCIS 478
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P + +I L +C+ L+ G++ K GL +V + G G + +
Sbjct: 479 PSNFALISSLSSCAGLKLLTAGQQVHCDAVK-WGLDLDTSVSNVLVKMYGECGAMSDYWK 537
Query: 550 LIEAMPMQPDAVIWGSLLAA-----------CKVHRNIMLGEYVAKKLLEI 589
+ +M + D V W +++ KV N+M G + K+ I
Sbjct: 538 VFNSMA-EHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFI 587
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 242/533 (45%), Gaps = 73/533 (13%)
Query: 45 IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDA 104
++KS +S++++ + L+ +A+ G A+ +F + KN T N +I GL++ F ++A
Sbjct: 301 VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
++F R+ N A Y V + AL+EYS
Sbjct: 361 VKIFVG--TRNTVDVN--------------ADTYVVLLS----ALAEYSISEE------- 393
Query: 165 VDFKMGTQVHALLSKSRYSS-DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
++G VH + ++ + + + + L++MY KCG + A ++F M + +SWN++
Sbjct: 394 -GLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTI 452
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I+ +QNG +A+ + M S I P L S +S+CA L G Q+H ++
Sbjct: 453 ISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW-G 511
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L D + N LV MY +CG + S Y K +F
Sbjct: 512 LDLDTSVSNVLVKMYGECGAM----------------------SDYWK---------VFN 540
Query: 344 KMLERNVVSWNALIAGYTQNGEN--EEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
M E + VSWN ++ G + + E + +F + R + P TF NLL A + L+ L
Sbjct: 541 SMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVL 599
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSW 460
+LG+Q H V+KHG+ D V N+LI Y K G + +F M + RD +SW
Sbjct: 600 ELGKQVHAAVMKHGVM------EDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISW 653
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+MI G NG EA+ M+ G+ D T +L AC+ +E G + + +
Sbjct: 654 NSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIR 713
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H + + + +VD+ + G +D A L +M Q + W S+++ H
Sbjct: 714 SHLESDVVVE-SALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSMISGYARH 764
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 357/663 (53%), Gaps = 70/663 (10%)
Query: 42 HARIIKSQFASEIFIQ--NR-------LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
HAR Q A IF Q NR +I YA+ G + A +VFD+M + ++N++I
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 93 TGLLKWGF-IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-------S 144
T ++K + A LF +PE++ S+ +M++GF + RF EA + + +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N LS Y + +V G V ++S S+++ Y K GR+
Sbjct: 180 SNVLLSGYLRAGKWNE---AVRVFQGMAVKEVVS----------CSSMVHGYCKMGRIVD 226
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACA 263
AR +FD M ERN+++W ++I Y + G D +F+RM G ++ + TLA + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF------------ 311
++EG QIH + R L DL LGN+L+ MY+K G + EA+ VF
Sbjct: 287 DFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 312 -------------------DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++MP +++VS T M+ G++ + +F M E++ ++
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I+ + NG EEAL F + ++ VCP YTF ++L+A A+LADL G Q H VV
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + +D+ V NSL+ MY KCG+ D +IF + E + VS+N MI G + NG+
Sbjct: 466 KMNIV------NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G +AL LF + G++P+ VT + +L AC H G V+ G KYF SM + + P DHY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR+G LD+A LI MP +P + +WGSLL+A K H + L E AKKL+E+EP
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
++ PYV+LS +Y+ +G+ + R+ + + + + K PG SWI + G V+ F+ D+ L
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ-L 698
Query: 653 NKE 655
N E
Sbjct: 699 NLE 701
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 224/486 (46%), Gaps = 55/486 (11%)
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
L + S+ ++ ++ I + + G + A +F M R+IVSW ++I+ Y +NG S
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSK 99
Query: 236 ALEVFVRM----------MASGI------------------EPDEVTLASVVSACASLAA 267
A +VF M M + + E + V+ A++++
Sbjct: 100 AWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGR 159
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
F E ++A K R D V N L+ Y + GK NEA VF M ++ VVS +SMV
Sbjct: 160 FDEAEFLYAE--TPVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVH 216
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHY 386
GY K + AR +F +M ERNV++W A+I GY + G E+ GLF +++E V
Sbjct: 217 GYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN 276
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T + AC + + G Q H V + L F D+F+GNSL+ MY K G + +
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEF------DLFLGNSLMSMYSKLGYMGEAK 330
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F M +D VSWN++I G Q +EA LF+KM D V+ ++ S G
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKG 386
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAMPMQ---PDAV 561
+ + + F G+ P KD+ +T M+ G +EA M + P++
Sbjct: 387 EISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS-GPYVLLSNMYAELGRWGEVVRVRKLM 620
+ S+L+A +++ G + +++++ N L +MY + G + ++ +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 621 RKRGVV 626
+ +V
Sbjct: 500 SEPNIV 505
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ F DS LL LR+ ++ R+ + E+ + ++ Y K G + A
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEA----VRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R +FD+M+ +NV TW ++I G K GF +D LF M +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD----------------- 270
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
VK++S A+ AC V ++ G+Q+H L+S+ D+++G++L+
Sbjct: 271 ------VKVNSNTLAV-------MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM---------- 243
MY K G + A+ VF M+ ++ VSWNSLIT Q S+A E+F +M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 244 MASGI-----------------EPDEVTLASVV--------------------------- 259
M G E D +T +++
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 260 --------SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
SA ASLA EGLQIH R+++ + NDL + N+LV MY KCG N+A +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ N+VS +M+S GY+ NG ++AL
Sbjct: 497 SCISEPNIVSYNTMIS-------------------------------GYSYNGFGKKALK 525
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +L+ P TF LL+AC ++ + LG + + +K G +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYA----C 580
Query: 432 LIDMYMKCGSVEDGCRIFETM 452
++D+ + G ++D + TM
Sbjct: 581 MVDLLGRSGLLDDASNLISTM 601
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/621 (34%), Positives = 335/621 (53%), Gaps = 55/621 (8%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ Y G AR++FD+M +N+ +WN +++G +K I++A +F MPER+
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV 111
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW +MV G+ Q EA F +M N FG + G +D +++ ++
Sbjct: 112 SWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDG--GRID--DARKLYDMM 167
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
DV + +I + GRV AR +FD MRERN+++W ++IT Y QN A
Sbjct: 168 P----GKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVAR 223
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++F M E EV+ S ++LG
Sbjct: 224 KLFEVMP----EKTEVSWTS------------------------------MLLG------ 243
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y G++ +A F+ MP++ V++ +M+ + + AR +F +M +R+ +W +I
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMI 303
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
Y + G EAL LF ++R+ V P+ + ++L+ CA LA LQ GRQ H H+V+
Sbjct: 304 KAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF- 362
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ D++V + L+ MY+KCG + +F+ +D + WN++I G A +G G EAL
Sbjct: 363 -----DGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M L G P+ VT+I +L ACS+ G +EEG + F SM + + P +HY+C VD+
Sbjct: 418 KVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG +D+A LI +M ++PDA +WG+LL ACK H + L E AKKL EIEP N+GPY
Sbjct: 478 LGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPY 537
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR-HPLNKEI 656
+LLS++ A +WG+V +RK MR + V K PGCSWIE+ V++F R HP I
Sbjct: 538 ILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMI 597
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
++L+ ++ GY P+ S
Sbjct: 598 LMMLEKTDGLLREAGYSPDCS 618
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 215/512 (41%), Gaps = 112/512 (21%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I+ L + G I++A + F S+ + SWNS+VSG+ + EA F +M N
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERN----- 78
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+ + L+ Y K + AR VF+
Sbjct: 79 ----------------------------------IVSWNGLVSGYIKNRMIEEARNVFEI 104
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN+VSW +++ Y Q G +A +F RM E +EV+ + G
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP----ERNEVSWTVMFG----------G 150
Query: 272 LQIHARLMRCEKLRN-----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
L R+ KL + D+V ++ + G+++EAR +FD M RNV++ T+M+
Sbjct: 151 LIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMI 210
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+GY + V AR +F M E+ VSW +++ GYT +G E+A F ++ + V
Sbjct: 211 TGYGQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI---- 266
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
AC N++I + G +
Sbjct: 267 -------AC----------------------------------NAMIVALGEVGEIVKAR 285
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
R+F+ M +RD +W MI + G+ EAL LF +M G +P ++I +L C+
Sbjct: 286 RVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLA 345
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
++ GR+ + + + D Y + ++ + + G L +AK + + P + D ++W
Sbjct: 346 SLQYGRQVHAHLVRCQFDG---DVYVASVLMTMYVKCGELVKAKLVFDRFPSK-DIIMWN 401
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
S+++ H LGE K E+ S + P
Sbjct: 402 SIISGYASHG---LGEEALKVFHEMPLSGTMP 430
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VHA +++ QF ++++ + L+ +Y KCG L A+ VFD+ +K+
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ WNSII+G G ++A ++F MP ++ + ++++ + + E L F
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456
Query: 141 KMHSE---NFALSEYSFGSALSACAGSVDFKM 169
M S+ + YS + AG VD M
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGKVDKAM 488
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 330/603 (54%), Gaps = 58/603 (9%)
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS---EALGYFVKMHSEN 146
S ++ LLK F FAS+ + Q S S Q D +A+ H+E+
Sbjct: 16 SALSSLLKPTF-------FASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAES 68
Query: 147 FALSE-YS-FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
L+ YS + S L +C K G Q+HA + + + D + + L+++Y C +S
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +FD + + NI WN LI Y NGP A++++ +M G+ PD T V+ ACA+
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L+A + G +IH +++ D+ +G AL+DMYAKCG
Sbjct: 189 LSAIEHGREIHEHVVQ-TGWEKDVFVGAALIDMYAKCG---------------------- 225
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
V SAR +F K+L R+ V WN+++A Y+QNG + L L + + PT
Sbjct: 226 ---------CVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPT 276
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++A A+ A L GR+ H GL + ES V +L+DMY KCGSV
Sbjct: 277 EATLVTAISASADNAALPQGRELH------GLSWRQEFESHDKVKTALVDMYAKCGSVRV 330
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+FE + + VSWNAMI G A +G+ TEAL LF++M KPDH+T +GVL ACSH
Sbjct: 331 ARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSH 389
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GL+EEG +F +M +++ + P HYTCMVDLLG +G LDEA LI M + PD+ +WG
Sbjct: 390 GGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWG 449
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL +CK+H N+ LGE ++L+E+EP ++G YV+LSN+YA+ G+W V ++RKLM R
Sbjct: 450 ALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRR 509
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP-------NAS 677
+ K CSWIE+ V+ F+ D HPL+ EIY L+ + MK GY P +
Sbjct: 510 LKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVE 569
Query: 678 DDE 680
DDE
Sbjct: 570 DDE 572
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 223/474 (47%), Gaps = 79/474 (16%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A LL SC+ K++ +++HA++ + F + I +L+++Y C L AR +FD+
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ N+F WN +I G +WN + A+ +
Sbjct: 136 IPKHNIFLWNVLIRGY----------------------AWNG---------PYEAAVQLY 164
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M ++F L ACA + G ++H + ++ + DV++G+ALIDMY KC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR VFD + R+ V WNS++ Y QNG L + M+ +G+ P E TL + +
Sbjct: 225 GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA A AA +G ++H R E +D V ALVDMYAKCG + AR +F+R+ ++ V
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKV-KTALVDMYAKCGSVRVARNLFERLGVKRV 343
Query: 320 VSETSMVSGYAKASSVKSARLMFTKM---LERNVVSWNALIAGYTQNGENEEALGLFRLL 376
VS +M++GYA A +F +M + + +++ +++ + G EE F +
Sbjct: 344 VSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETM 403
Query: 377 KRE-SVCPT--HYT------------------------------FGNLLNACANLADLQL 403
R+ + PT HYT +G LLN+C A+++L
Sbjct: 404 IRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVEL 463
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLI--DMYMKCGSVEDGCRIFETMVER 455
G A R + E D GN +I ++Y + G E ++ + M +R
Sbjct: 464 GEIALE-------RLIELEPDD--AGNYVILSNIYAQAGKWEGVAKLRKLMTDR 508
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 32/299 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F +L +C ++ R +H ++++ + ++F+ LID+YAKCGC+ AR+
Sbjct: 175 DNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSARE-- 232
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+F + RD WNSM++ ++Q+ L
Sbjct: 233 -----------------------------VFDKILVRDAVLWNSMLAAYSQNGHPDACLS 263
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M +E + +A+SA A + G ++H L + + S + +AL+DMY
Sbjct: 264 LCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYA 323
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V AR +F+ + + +VSWN++IT Y +G A++AL++F M +PD +T
Sbjct: 324 KCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVG 382
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+SAC+ +EG ++R K+ + +VD+ G+L+EA + +M +
Sbjct: 383 VLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKV 441
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/657 (35%), Positives = 349/657 (53%), Gaps = 79/657 (12%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+S + +HAR+I + ++ + N LI YAKCG + AR VFD
Sbjct: 27 LSKGKALHARLITAAH-FDVVLHNNLISFYAKCGRVGLARTVFD---------------- 69
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+MP R+ S N ++SG+A R E+L + +F ++EY
Sbjct: 70 ---------------AMPFRNAVSANLLMSGYASSGRHKESLQL---LRVVDFGMNEYVL 111
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+A+SA A + MG Q H K+ ++ Y+ +A++ MY +C + A +VF+ +
Sbjct: 112 SAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSG 171
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+ ++NS+I Y G +L + M + D V+ +V+ CAS+ G Q+
Sbjct: 172 FDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQV 231
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
HA+ ++ ++L ++ +G+ALVDMY KC +++A F+ +P +NVVS
Sbjct: 232 HAQALK-KRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVS------------- 277
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
W A++ YTQN E+AL LF ++ E V P +T+ LN+
Sbjct: 278 ------------------WTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNS 319
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
CA LA L+ G V+K +G + V N+L++MY K GS+ED R+F +M
Sbjct: 320 CAGLAALRTGNALGACVMK------TGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPL 373
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
RD VSWN +I G A +G E + F ML P +VT +GVL AC+ GLV+E Y
Sbjct: 374 RDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYY 433
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
++M KE G+ P K+HYTCMV LL R G LDEA+ I + D V W SLL +C+V++
Sbjct: 434 LNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYK 493
Query: 575 NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
N LG VA+++L++EPS+ G YVLLSNMYA+ RW VV+VRK MR+R V K PG SWI
Sbjct: 494 NYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWI 553
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEEQ 685
+ V+VF ++K HP +I L+ L ++K +GYVPN + DDE EE
Sbjct: 554 HVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEH 610
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 148/314 (47%), Gaps = 35/314 (11%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
V+ + G+ D + +L C K +VHA+ +K + +++ + L+D+Y K
Sbjct: 197 VRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGK 256
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
C ++ A + F+ + KNV +W +++T +
Sbjct: 257 CDHVHDANRAFEVLPEKNVVSWTAVMT-------------------------------AY 285
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
Q++ + +AL F+ M E +E+++ AL++CAG + G + A + K+ + +
Sbjct: 286 TQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHL 345
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+ +AL++MY K G + A RVF M R++VSWN +IT Y +G A + +E F M+++
Sbjct: 346 LVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSA 405
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
+ P VT V+SACA L E +M+ + +V + + G+L+E
Sbjct: 406 AVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDE 465
Query: 307 ARCVFDRMPIRNVV 320
A +R + N +
Sbjct: 466 A----ERFIVNNCI 475
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
DL G+ H R ++ D+ + N+LI Y KCG V +F+ M R+ VS
Sbjct: 26 DLSKGKALHA-------RLITAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVS 78
Query: 460 WNAMIVGCAQNGYGTEALGLFK 481
N ++ G A +G E+L L +
Sbjct: 79 ANLLMSGYASSGRHKESLQLLR 100
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/676 (32%), Positives = 358/676 (52%), Gaps = 50/676 (7%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P + LL SC KS+++ R++H II F + +L+ Y+ L A + +
Sbjct: 176 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENS 235
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ + F WN +I+ ++ +GF Q +AL +
Sbjct: 236 NILHPFPWNLLISSYVR--------------------------NGFCQ-----KALSAYK 264
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + +++ S L AC +D G +VH ++ SR + + +ALI MYGKCG
Sbjct: 265 QMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCG 324
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+V AR +FD + ER+ VSWNS+I+ Y G ++A E+F M A IE + + ++
Sbjct: 325 KVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAG 384
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC--VFDRMPIRN 318
+K L++ ++ MR D V AL+ C + +A+ IR+
Sbjct: 385 GYLRTGNYKGALELLSQ-MRKXGSHLDSV---ALIIGLGACSHIGDAKLGKEIHSFAIRS 440
Query: 319 VVSET-----SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
E S+++ Y++ +K A L+F M ++++SWN++I+G +EEA L
Sbjct: 441 CFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLL 500
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R + + P + T ++L CA +A+LQ G++ H ++ + + + + N+L+
Sbjct: 501 REMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR-----EDFKDHLLLWNALV 555
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY + G V + R+F+ + ERD +++ +MI G G G AL LF++M KPDH+
Sbjct: 556 DMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHI 615
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
TMI VL ACSH+GLV +G+ F M +GL P +H+ CM DL GRAG L++AK +I
Sbjct: 616 TMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRN 675
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP +P +W +L+ AC++HRN +GE+ A+KLLE++P N G YVL++NMYA G W ++
Sbjct: 676 MPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKL 735
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+VR MR GV K PGC+W+++ + F+V D + EIY +L+ LT +K GY+
Sbjct: 736 AKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIKEAGYI 795
Query: 674 PN---ASDDEAYEEQN 686
+ S DE E N
Sbjct: 796 SSEDFGSGDETSGEFN 811
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 20/440 (4%)
Query: 139 FVKMHSENFA--LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+++H+ + + L + S LS+C G Q+H + + + L+ Y
Sbjct: 160 LIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 219
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ A + + + WN LI+ Y +NG AL + +M+ GI PD T
Sbjct: 220 SAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYP 279
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC G ++H + +++ L++ NAL+ MY KCGK+ AR +FD++P
Sbjct: 280 SVLKACGEELDLGFGKEVHESI-NASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPE 338
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGL 372
R+ VS SM+S YA A +F M +E N++ WN + GY + G + AL L
Sbjct: 339 RDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALEL 398
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+++ L AC+++ D +LG++ H+ + R GE V NSL
Sbjct: 399 LSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAI----RSCFGEVDT--VKNSL 452
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
I MY +C ++ +F+ M + +SWN++I GC EA L ++MLL G +P++
Sbjct: 453 ITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNY 512
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH---YTCMVDLLGRAGCLDEAKT 549
VT+ VL C+ ++ G+++ M++ KDH + +VD+ R+G + EA+
Sbjct: 513 VTIASVLPLCARVANLQHGKEFHCYMTRRED---FKDHLLLWNALVDMYARSGKVLEARR 569
Query: 550 LIEAMPMQPDAVIWGSLLAA 569
+ + M + D + + S++A
Sbjct: 570 VFD-MLGERDKMTYTSMIAG 588
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 229/489 (46%), Gaps = 41/489 (8%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
KQ+V D+ + +L +C + + VH I S+ + + N LI +Y KC
Sbjct: 264 KQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKC 323
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMV 123
G + AR +FDK+ ++ +WNS+I+ G ++A LF SM E + WN++
Sbjct: 324 GKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIA 383
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
G+ + + AL +M L + L AC+ D K+G ++H+ +S +
Sbjct: 384 GGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFG 443
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+ ++LI MY +C + A +F M ++++SWNS+I+ + +A + M
Sbjct: 444 EVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREM 503
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ SGIEP+ VT+ASV+ CA +A + G + H + R E ++ L+L NALVDMYA+ GK
Sbjct: 504 LLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGK 563
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ EAR VFD + R+ ++ TSM++GY
Sbjct: 564 VLEARRVFDMLGERDKMTYTSMIAGYG-------------------------------MQ 592
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
GE + AL LF + + P H T +L+AC++ + G+ ++ +R L G
Sbjct: 593 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQ-----LLFEKMRSLYGLT 647
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
+ + D++ + G + I M + + A ++G + TE +G +
Sbjct: 648 PHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTE-IGEWAAE 706
Query: 484 LLCGEKPDH 492
L KP++
Sbjct: 707 KLLEMKPEN 715
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/669 (34%), Positives = 356/669 (53%), Gaps = 79/669 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N++++ L+++G A R+FA MPERD SWN MV G+ + EAL + +M
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y+F L +C G D++MG +VHA + + + +V + +AL+ MY KCG V AR+V
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA-- 266
FD M + +SWN++I + +NG + LE+F+ M+ ++P+ +T+ SV A L+
Sbjct: 247 FDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDV 306
Query: 267 ---------AFKEG-----------LQIHARLMRCEKLRN--------DLVLGNALVDMY 298
A K G +Q++A L + R D + A++ Y
Sbjct: 307 TFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGY 366
Query: 299 AKCGKLNEARCVFDRMPIRNV--------------------------------------- 319
K G ++A V+ M + NV
Sbjct: 367 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYI 426
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V +++ YAK+ + A +F M E++VVSW+++IAG+ N N EAL FR + +
Sbjct: 427 VVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 486
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P TF L ACA L+ G++ H HV++ G+ E + ++ N+LID+Y+KC
Sbjct: 487 -VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGI------EYEGYLPNALIDLYVKC 539
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G F +D VSWN MI G +G+G AL F +M+ GE PD VT + +L
Sbjct: 540 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALL 599
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACS G+V EG + F SM++++ + P HY CMVDLL RAG L EA I MP+ PD
Sbjct: 600 CACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPD 659
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL C++HR++ LGE AK +L +EP+++G +VLL ++YA+ W ++ RVRK
Sbjct: 660 AAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKT 719
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP---NA 676
MR++G+ GCSW+E+ G V+ F+ D+ HP +EI VL+ + MK GY P +
Sbjct: 720 MREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHC 779
Query: 677 SDDEAYEEQ 685
+DE ++
Sbjct: 780 PEDEVLKDD 788
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 196/407 (48%), Gaps = 41/407 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ M + G A RVF M ER++ SWN ++ Y ++G +AL+++ RMM +G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD T V+ +C + ++ G ++HA ++R ++ + NAL+ MYAKCG + A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRF-GFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFD M + + +S +M IAG+ +NGE
Sbjct: 244 RKVFDSMTVMDCISWNAM-------------------------------IAGHFENGECN 272
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L LF + + V P T ++ A L+D+ ++ H VK G D+
Sbjct: 273 AGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGF------AGDVA 326
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSLI MY G + +F M RD ++W AMI G +NG+ +AL ++ M +
Sbjct: 327 FCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNN 386
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD +T+ L AC+ G ++ G K +++ G ++++ ++ +D+A
Sbjct: 387 VSPDDITIASALAACACLGSLDVGVK-LHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445
Query: 548 KTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSN 593
+ + M + D V W S++A C HRN Y L +++P++
Sbjct: 446 IEVFKCM-HEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNS 491
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 153/332 (46%), Gaps = 54/332 (16%)
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+S PDE ++ C A + GL+ A L LGNA++ M + G+
Sbjct: 81 SSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFG-LRLGNAMLSMLVRFGET 139
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
A VF +MP R+V S MV GY K+ G
Sbjct: 140 WHAWRVFAKMPERDVFSWNVMVGGYGKS-------------------------------G 168
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+EAL L+ + V P YTF +L +C + D ++GR+ H HV LRF GEE
Sbjct: 169 LLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV----LRFGFGEEV 224
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+ N+L+ MY KCG V ++F++M D +SWNAMI G +NG L LF ML
Sbjct: 225 DVL--NALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTML 282
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE-HGLAPLK----DHYTC--MVDL 537
+P+ +T+ V A +GL+ + + +KE HGLA + D C ++ +
Sbjct: 283 HDEVQPNLMTITSVTVA---SGLLSD-----VTFAKEMHGLAVKRGFAGDVAFCNSLIQM 334
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G + +A+T+ M + DA+ W ++++
Sbjct: 335 YASLGMMRQARTVFSRMDTR-DAMTWTAMISG 365
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 356/690 (51%), Gaps = 80/690 (11%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
T + HARI+KS ++ +I +LI Y SN N F
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASY----------------SNYNCF----------- 66
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+DA + S+P+ S++S++ + F++++G F +M S + +
Sbjct: 67 ----NDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNL 122
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-- 215
CA FK+G Q+H + S D ++ ++ MY +CGR+ AR+VFD M ++
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 216 ---------------------------------NIVSWNSLITCYEQNGPASDALEVFVR 242
NIVSWN +++ + ++G +A+ +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+ G PD+VT++SV+ + G IH +++ L++ V+ +A++DMY K G
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSG 301
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT----KMLERNVVSWNALIA 358
+ +F++ + + ++G ++ V A MF + +E NVVSW ++IA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G QNG++ EAL LFR ++ V P H T ++L AC N+A L GR H V+ L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL- 420
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
++ VG++LIDMY KCG + +F M ++ V WN+++ G + +G E +
Sbjct: 421 -----DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F+ ++ KPD ++ +L AC GL +EG KYF MS+E+G+ P +HY+CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EA LI+ MP +PD+ +WG+LL +C++ N+ L E A+KL +EP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSN+YA G W EV +R M G+ K PGCSWI++ V + DK HP +I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITE 655
Query: 659 VLKMLTREMKRVGYVPN---ASDDEAYEEQ 685
+ +++EM++ G+ PN A D +EQ
Sbjct: 656 KMDEISKEMRKSGHRPNLDFALHDVEEQEQ 685
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 198/421 (47%), Gaps = 71/421 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS L C + +++H S + F+Q + +Y +CG + ARKVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D+MS+K+V T ++++ + G +++ R+ + M E + SWN ++SGF +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ F K+H F + + S L + S MG +H + K D + SA+I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 194 DMYGKCGR-------------------------------VSCARRVFDGMRER----NIV 218
DMYGK G V A +F+ +E+ N+V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I QNG +ALE+F M +G++P+ VT+ S++ AC ++AA G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R L N + +G+AL+DMYAKCG++N ++ VF+ MP +N+
Sbjct: 415 VRVHLLDN-VHVGSALIDMYAKCGRINLSQIVFNMMPTKNL------------------- 454
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
V WN+L+ G++ +G+ +E + +F L R + P +F +LL+AC +
Sbjct: 455 ------------VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 399 A 399
Sbjct: 503 G 503
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 307/531 (57%), Gaps = 12/531 (2%)
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV--SCAR 206
L E+ S L C F QVHA + ++ S Y+ + LI M K S
Sbjct: 40 LLEWRLMSILHDC---TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPL 96
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
VF + N W ++I Y G S++ + RM G+ P T +++ AC +
Sbjct: 97 LVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
G Q+HA+ + +DL +GN+++D+Y KCG L AR VFD M R+VVS T ++
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
YAK ++SA +F + +++V+W A++ GY QNG +EAL F+ ++ +
Sbjct: 217 VAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKH-GLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +++ACA QLG H + ++ R G ++ VG++LIDMY KCGS ++
Sbjct: 277 TLAGVISACA-----QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
++FE M ER+ S+++MI+G A +G AL LF ML +P+ VT IG+L ACSHA
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLVE+GR+ F+ M K G+AP DHY CMVDLLGRAGCL+EA L++ MPM+P+ +WG+
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC++H N + + A +L ++EP+ G Y+LLSN+YA GRW EV ++RK++R++G
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 626 VKQPGCSWIE-ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
K PGCSW E G ++ F D HP + EI LK L ++ GY PN
Sbjct: 512 KKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 178/309 (57%), Gaps = 7/309 (2%)
Query: 11 VGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQNRLIDVYAKCGC 69
VG ++F F+ L +C + ++ ++VHA+ I+ FAS++++ N +ID+Y KCG
Sbjct: 138 VGPVSFT----FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGF 193
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L ARKVFD+MS ++V +W +I K+G ++ AS LF +P +D +W +MV+G+AQ+
Sbjct: 194 LGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQN 253
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVY 187
R EAL YF KM E + +SACA K + + +S + S +V
Sbjct: 254 GRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVV 313
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+GSALIDMY KCG A +VF+ M+ERN+ S++S+I Y +G A AL++F M+ +
Sbjct: 314 VGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE 373
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I P++VT ++SAC+ ++G Q+ A++ + + +VD+ + G L EA
Sbjct: 374 IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEA 433
Query: 308 RCVFDRMPI 316
+ MP+
Sbjct: 434 LDLVKTMPM 442
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 216/477 (45%), Gaps = 113/477 (23%)
Query: 36 SDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK--VFDKMSNKNVFTWNSIIT 93
S ++VHA II++ + ++ +LI + K G+ VF +++ N F W +
Sbjct: 56 SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA--- 112
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
M+ G+A SE+ ++ +M + ++
Sbjct: 113 ----------------------------MIRGYALQGLLSESTNFYTRMRRDGVGPVSFT 144
Query: 154 FGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
F + AC +++ +G QVHA + ++SD+Y+G+++ID+Y KCG + CAR+VFD M
Sbjct: 145 FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEM 204
Query: 213 RERNIVSWNSLI-------------------------------TCYEQNGPASDALEVFV 241
ER++VSW LI T Y QNG +ALE F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN------DLVLGNALV 295
+M G+E DEVTLA V+SACA L A K HA +R R+ ++V+G+AL+
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVK-----HANWIRDIAERSGFGPSGNVVVGSALI 319
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
DMY+KCG +EA VF+ M RNV S +SM+ GYA
Sbjct: 320 DMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA------------------------- 354
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+G AL LF + + + P TF +L+AC++ ++ GRQ + K
Sbjct: 355 ------MHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKF- 407
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
F D + ++D+ + G +E+ + +TM +E + W A++ C +G
Sbjct: 408 --FGVAPSPDHYA--CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 349/624 (55%), Gaps = 28/624 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N I A+ G + GAR F+ M + ++N+++ G + D A LF MP RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 118 SWNSMVSGFA-QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
S+N+++SG + + +A + S F S SF S L ++
Sbjct: 81 SYNALISGLSLRRQTLPDAAA---ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ + + S + L+D GRV+ ARR+FD M +R++V+W ++++ Y Q G ++A
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--RLMRCEKLRNDLVLGNAL 294
+F DE+ +VVS A ++ + + +++ +L RN++ L
Sbjct: 194 RALF----------DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V Y + G + +A +F+ MP V + +M+ G+ + V +A+ +F KM ER+ +W+
Sbjct: 244 VG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I Y QN EAL FR + V P + + ++L CA LA L GR+ H +++
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
+ D+F ++LI MY+KCG+++ R+F T +D V WN+MI G AQ+G G
Sbjct: 363 SF------DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+ALG+F M L G PD +T IG L ACS+ G V+EGR+ F+SM+ + P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
VDLLGR+G ++EA LI+ MP++PDAVIWG+L+ AC++HRN + E+ AKKLLE+EP N+
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNA 536
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK-RHPLN 653
GPYVLLS++Y +GRW + ++RK + R + K PGCSWIE V++F D HP +
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS 677
I +L+ L + GY + S
Sbjct: 597 AAILRILEKLDGLLMESGYSADGS 620
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 224/484 (46%), Gaps = 74/484 (15%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR +++ D A I F + L+ Y + G L A ++F +M +N ++
Sbjct: 91 LRRQTLPDAAAALASI---PFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYT 147
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
++ GLL G +++A RLF MP+RD +W +M+SG+ Q R +EA F +M N
Sbjct: 148 VLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV- 206
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS------------------------- 184
S+ + +S A + + + ++ ++ + S
Sbjct: 207 ---SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
Query: 185 --DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
V +A++ +G+ G V A+ VF+ M ER+ +W+++I YEQN +AL F
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ G+ P+ ++ S+++ CA+LA G ++HA ++RC D+ +AL+ MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSALITMYIKCG 382
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L++A+ VF +++V SM++GYA Q
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYA-------------------------------Q 411
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSG 421
+G E+ALG+F ++ + P T+ L AC+ ++ GR+ ++ V +R G
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIR--PG 469
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
E + ++D+ + G VE+ + + M VE D V W A++ C + A
Sbjct: 470 AEH----YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAA 525
Query: 481 KKML 484
KK+L
Sbjct: 526 KKLL 529
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/654 (33%), Positives = 350/654 (53%), Gaps = 84/654 (12%)
Query: 24 KLLDSCL----RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
KLL+ L + +++ +++HA+I+KS ++F+ +LI ++ C + A F++
Sbjct: 18 KLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQ 77
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ NV +N+ M+ + + + S+A F
Sbjct: 78 VQYPNVHLYNT-------------------------------MIRAHSHNSQPSQAFATF 106
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++F L C G+V + VHA + K + SDV++ ++LID Y KC
Sbjct: 107 FAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKC 166
Query: 200 GR--VSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
G +S A+++F M R++VSWNS+I+ + G +A +VF M P++
Sbjct: 167 GSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEM------PEK---- 216
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
D + N ++D Y K GK+++A +FD MP
Sbjct: 217 ------------------------------DGISWNTMLDGYVKVGKMDDAFKLFDEMPE 246
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RNVVS ++MV GY KA ++ AR++F KM +N+VSW +++G+ + G EA+ LF +
Sbjct: 247 RNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQM 306
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++ + + T ++L ACA L LG + H + + + + + N+L+DMY
Sbjct: 307 EKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTE------ISNALVDMY 360
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG + +F + +D VSWNAM+ G A +G+G +AL LFK+M G P+ VTMI
Sbjct: 361 AKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMI 420
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVLCAC+HAGL+++G +YFS+M +++ L P +HY CMVDLLGR G L+EA LI MPM
Sbjct: 421 GVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPM 480
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
P+A+IWG+LL AC++H + L V L+E+EP++SG + +LSN+YA G W V
Sbjct: 481 APNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANT 540
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
R MR G K G S IE+ V+ F V D+ HP + IY V+ L E+K+V
Sbjct: 541 RLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELKQV 594
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 213/465 (45%), Gaps = 92/465 (19%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC--L 70
D + D+ F LL C + + VHA+I K F S++F+ N LID Y+KCG +
Sbjct: 112 DGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGI 171
Query: 71 YGARKVFDKM-SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
A+K+F M + ++V +WNS+I+GL K G ++A ++F MPE+D SWN+M+ G+ +
Sbjct: 172 SAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKV 231
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
+ +A F +M N V
Sbjct: 232 GKMDDAFKLFDEMPERN---------------------------------------VVSW 252
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
S ++ Y K G + AR +FD M +N+VSW +++ + + G A +A+ +F +M + ++
Sbjct: 253 STMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLK 312
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
D T+ S+++ACA G +IHA + + + + NALVDMYAKCG+LN A
Sbjct: 313 LDNGTVMSILAACAESGLLGLGEKIHASI-KNNNFKCTTEISNALVDMYAKCGRLNIAYD 371
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VF+ + ++VVS WNA++ G +G +A
Sbjct: 372 VFNDIKNKDVVS-------------------------------WNAMLQGLAMHGHGVKA 400
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF+ +K E P T +L AC H ++ G+R+ S E D +
Sbjct: 401 LELFKRMKEEGFSPNKVTMIGVLCAC-----------THAGLIDDGIRYFSTMERDYTLV 449
Query: 430 NS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +E+ R+ M + + + W ++ C
Sbjct: 450 PEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGAC 494
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/600 (35%), Positives = 341/600 (56%), Gaps = 41/600 (6%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
+S+ ++ +R C S++ +Q F +A+ + L + L CA
Sbjct: 4 SSKFHSNRTKRVPCIVKSLLHLSSQGQLF-QAISSLGLLSRNGIRLPSKTLAYLLQQCAN 62
Query: 164 SVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCG---------------------- 200
+ K+G VH L + + ++ + LI+MY KCG
Sbjct: 63 TKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNG 122
Query: 201 ---------RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
++ AR++FD M E+++VSWN+++ Y ++G +DAL + + GI +
Sbjct: 123 MLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYN 182
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
E + A +++ C + + Q H +++ L N LV+ ++++D YAKC ++ +AR +F
Sbjct: 183 EYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSN-LVISSSVLDAYAKCSEMGDARRLF 241
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D M IR+V++ T+MVSGYA+ V++AR +F M E+N V+W +LIAGY ++ +AL
Sbjct: 242 DEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALE 301
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF + ++ P +TF + L A A++A L G+Q H ++++ +R + V +S
Sbjct: 302 LFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIR------PNTIVVSS 355
Query: 432 LIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
LIDMY KCG +E G +F+ M ++ D V WN +I AQ+G G EA+ +F M+ G KP
Sbjct: 356 LIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKP 415
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D +T+I +L ACSH+GLV+EG + + S++ HG+ P ++HY C++DLLGRAG D
Sbjct: 416 DRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQ 475
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
+E MP +P+ IW +LL C++H NI G VA+K++E++P +S YVLLS+++A +GRW
Sbjct: 476 LEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRW 535
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
V VR+LM +R V K SWIEI V+ F D+ HPL + IYL LK L M+ V
Sbjct: 536 ELVENVRQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHMEEV 595
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 235/495 (47%), Gaps = 83/495 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARI-IKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
L S A LL C +KS+ + VH + + F+ N LI++Y+KCG A K
Sbjct: 48 LPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYK 107
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFD+MS +N+++WN +++G K G I A +LF MPE+D SWN+MV +A+ ++A
Sbjct: 108 VFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDA 167
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L ++ ++ +EYSF L+ C + ++ Q H + + + S++ + S+++D
Sbjct: 168 LRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDA 227
Query: 196 YGKC-------------------------------GRVSCARRVFDGMRERNIVSWNSLI 224
Y KC G V AR +FD M E+N V+W SLI
Sbjct: 228 YAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLI 287
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y ++ ALE+F +MMA I PD+ T +S + A AS+A+ G QIH L+R +
Sbjct: 288 AGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRT-NI 346
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
R + ++ ++L+DMY+KCG L R VFD LM K
Sbjct: 347 RPNTIVVSSLIDMYSKCGCLEVGRLVFD---------------------------LMGDK 379
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+VV WN +I+ Q+G +EA+ +F + R + P T LLNAC
Sbjct: 380 W---DVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNAC--------- 427
Query: 405 RQAHTHVVKHGLRFLSGEES-DIFVGNS-----LIDMYMKCGSVEDGCRIFETMV--ERD 456
+H+ +V+ GLR S + N LID+ + G + E M D
Sbjct: 428 --SHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPND 485
Query: 457 WVSWNAMIVGCAQNG 471
+ WNA++ C +G
Sbjct: 486 EI-WNALLGVCRMHG 499
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/663 (35%), Positives = 357/663 (53%), Gaps = 70/663 (10%)
Query: 42 HARIIKSQFASEIFIQ--NR-------LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
HAR Q A IF Q NR +I YA+ G + A +VFD+M + ++N++I
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 93 TGLLKWGF-IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-------S 144
T ++K + A LF +PE++ S+ +M++GF + RF EA + + +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N LS Y + +V G V ++S S+++ Y K GR+
Sbjct: 180 SNVLLSGYLRAGKWNE---AVRVFQGMAVKEVVS----------CSSMVHGYCKMGRIVD 226
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACA 263
AR +FD M ERN+++W ++I Y + G D +F+RM G ++ + TLA + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF------------ 311
++EG QIH + R L DL LGN+L+ MY+K G + EA+ VF
Sbjct: 287 DFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 312 -------------------DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++MP +++VS T M+ G++ + +F M E++ ++
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I+ + NG EEAL F + ++ VCP YTF ++L+A A+LADL G Q H VV
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + +D+ V NSL+ MY KCG+ D +IF + E + VS+N MI G + NG+
Sbjct: 466 KMNIV------NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G +AL LF + G++P+ VT + +L AC H G V+ G KYF SM + + P DHY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR+G LD+A LI MP +P + +WGSLL+A K H + L E AKKL+E+EP
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
++ PYV+LS +Y+ +G+ + R+ + + + + K PG SWI + G V+ F+ D+ L
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ-L 698
Query: 653 NKE 655
N E
Sbjct: 699 NLE 701
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 224/486 (46%), Gaps = 55/486 (11%)
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
L + S+ ++ ++ I + + G + A +F M R+IVSW ++I+ Y +NG S
Sbjct: 40 FLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSK 99
Query: 236 ALEVFVRM----------MASGI------------------EPDEVTLASVVSACASLAA 267
A +VF M M + + E + V+ A++++
Sbjct: 100 AWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGR 159
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
F E ++A K R D V N L+ Y + GK NEA VF M ++ VVS +SMV
Sbjct: 160 FDEAEFLYAE--TPVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVH 216
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHY 386
GY K + AR +F +M ERNV++W A+I GY + G E+ GLF +++E V
Sbjct: 217 GYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN 276
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
T + AC + + G Q H V + L F D+F+GNSL+ MY K G + +
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEF------DLFLGNSLMSMYSKLGYMGEAK 330
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F M +D VSWN++I G Q +EA LF+KM D V+ ++ S G
Sbjct: 331 AVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKG 386
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAMPMQ---PDAV 561
+ + + F G+ P KD+ +T M+ G +EA M + P++
Sbjct: 387 EISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS-GPYVLLSNMYAELGRWGEVVRVRKLM 620
+ S+L+A +++ G + +++++ N L +MY + G + ++ +
Sbjct: 440 TFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI 499
Query: 621 RKRGVV 626
+ +V
Sbjct: 500 SEPNIV 505
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ F DS LL LR+ ++ R+ + E+ + ++ Y K G + A
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEA----VRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R +FD+M+ +NV TW ++I G K GF +D LF M +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD----------------- 270
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
VK++S A+ AC V ++ G+Q+H L+S+ D+++G++L+
Sbjct: 271 ------VKVNSNTLAV-------MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM---------- 243
MY K G + A+ VF M+ ++ VSWNSLIT Q S+A E+F +M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 244 MASGI-----------------EPDEVTLASVV--------------------------- 259
M G E D +T +++
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 260 --------SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
SA ASLA EGLQIH R+++ + NDL + N+LV MY KCG N+A +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ N+VS +M+S GY+ NG ++AL
Sbjct: 497 SCISEPNIVSYNTMIS-------------------------------GYSYNGFGKKALK 525
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +L+ P TF LL+AC ++ + LG + + +K G +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYA----C 580
Query: 432 LIDMYMKCGSVEDGCRIFETM 452
++D+ + G ++D + TM
Sbjct: 581 MVDLLGRSGLLDDASNLISTM 601
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/597 (38%), Positives = 320/597 (53%), Gaps = 55/597 (9%)
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
S +L +F++ S F + SAL +C + +HA S + D ++ S+L
Sbjct: 4 SNSLYHFLRHVS--FPPDPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSL 58
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS------------------ 234
+ Y + G AR VFD M E+N+V W++LI Y G A
Sbjct: 59 LHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNV 118
Query: 235 -----------------DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
DA+ VRM + G PD ++ +SA + G Q+H
Sbjct: 119 ITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGY 178
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++ R D + AL+DMY KCG+ +E VF +V S ++V+G ++ + V
Sbjct: 179 VVKA-GCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSE 237
Query: 338 ARLMFTKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A L+F + + E NVVSW +++A QNG + EA+ LFR ++ V P T +L
Sbjct: 238 ALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A AN+A L GR AH ++ G FL D++VG++L+DMY KCG IF+ M
Sbjct: 298 AFANVAALMHGRSAHCFSLRKG--FLH----DVYVGSALVDMYAKCGKARHARTIFDAMP 351
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
R+ VSWNAMI G A +G A+ LF M C +KPD VT VL ACS AGL EEGR+
Sbjct: 352 SRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
YF+ M + HG++P +HY CMV LLGR+G LDEA LI MP +PD+ IWGSLL +C+V+
Sbjct: 412 YFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVY 471
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
N++L E A+KL ++EP N+G YVLLSN+YA W V RVR M+ G+ K+ GCSW
Sbjct: 472 GNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSW 531
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS----DDEAYEEQN 686
IEI V++ + D HP+ I L LT EM R+G+ P+ D E E+ N
Sbjct: 532 IEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDN 588
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/402 (33%), Positives = 196/402 (48%), Gaps = 45/402 (11%)
Query: 21 PFAKLLDSCLRSKSVSD-TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
P LL S L+S R +HA + S A + F+ + L+ Y + G AR VFD+
Sbjct: 18 PDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDR 77
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFSEA 135
M KNV W+++I G G + A L M E + +WN +VSG + R +A
Sbjct: 78 MPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDA 137
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ V+MHSE F ALSA + +G QVH + K+ D + +ALIDM
Sbjct: 138 VTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDM 197
Query: 196 YGKCGRVSCARRVFD---------------GMR--------------------ERNIVSW 220
YGKCGR RVF G+ E N+VSW
Sbjct: 198 YGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSW 257
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
S++ C QNG +A+++F M + G+EP+ VT+ V+ A A++AA G H +R
Sbjct: 258 TSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLR 317
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +D+ +G+ALVDMYAKCGK AR +FD MP RNVVS +M+ GYA +A
Sbjct: 318 -KGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQ 376
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+F M + ++V++ ++ +Q G EE F +++
Sbjct: 377 LFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQ 418
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 151/305 (49%), Gaps = 4/305 (1%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F D++ + L + K VS ++VH ++K+ + + LID+Y KCG +
Sbjct: 150 FPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVR 209
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDR 131
VF + S+ +V + N+++ GL + + +A LF E + SW S+V+ Q+ R
Sbjct: 210 VFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGR 269
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
EA+ F M S + + L A A G H + + DVY+GSA
Sbjct: 270 DLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSA 329
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+DMY KCG+ AR +FD M RN+VSWN++I Y +G A++A+++F M +PD
Sbjct: 330 LVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPD 389
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VT V+ AC+ +EG + + + + + +V + + GKL+EA +
Sbjct: 390 LVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLI 449
Query: 312 DRMPI 316
+ MP
Sbjct: 450 NEMPF 454
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/622 (35%), Positives = 340/622 (54%), Gaps = 45/622 (7%)
Query: 60 LIDVYAKCGCLYGARKVFDKMS-NKNVFTWNS-IITGLLKWGFIDDASRLFASM-PERDQ 116
L+ + +C ++V +M N ++ T N+ +++ + +S LF+ + P +
Sbjct: 27 LVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPND 86
Query: 117 CSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
++N M+ + AL F +M S + ++F +CA H+
Sbjct: 87 YAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHS 146
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
LL K SD + +LI Y +CG V+ AR+VFD + R+ VSWNS+I Y + G A +
Sbjct: 147 LLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCARE 206
Query: 236 ALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
A+EVF M G EPDE++L S++ AC L + G + ++ N + G+AL
Sbjct: 207 AVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYI-GSAL 265
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ MYAKCG+ ++SAR +F M R+V++WN
Sbjct: 266 ISMYAKCGE-------------------------------LESARRIFDGMAARDVITWN 294
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I+GY QNG +EA+ LF +K + V T +L+ACA + L LG+Q + +
Sbjct: 295 AVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQR 354
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
G + DIFV +LIDMY K GS+++ R+F+ M +++ SWNAMI A +G
Sbjct: 355 GF------QHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAK 408
Query: 475 EALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
EAL LF+ M G +P+ +T +G+L AC HAGLV+EG + F MS GL P +HY+
Sbjct: 409 EALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYS 468
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLL RAG L EA LI MP +PD V G+LL AC+ +N+ +GE V + +LE++PS
Sbjct: 469 CMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPS 528
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
NSG Y++ S +YA L W + R+R LMR++G+ K PGCSWIE+ H++ F D
Sbjct: 529 NSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLD 588
Query: 653 NKEIYLVLKMLTREMKRVGYVP 674
+ ++ ++ +L E+KR GYVP
Sbjct: 589 SIDLSNIIDLLYEELKREGYVP 610
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 33/300 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL +C + R V +++ +I + LI +YAKCG L AR++F
Sbjct: 223 DEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIF 282
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M+ ++V TWN++I+G + G D+A LF M E D + N +
Sbjct: 283 DGMAARDVITWNAVISGYAQNGMADEAILLFHGMKE-DCVTANKI--------------- 326
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + LSACA +G Q+ S+ + D+++ +ALIDMY
Sbjct: 327 ---------------TLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYA 371
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTL 255
K G + A+RVF M ++N SWN++I+ +G A +AL +F M G P+++T
Sbjct: 372 KSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITF 431
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++SAC EG ++ + L + + +VD+ A+ G L EA + +MP
Sbjct: 432 VGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMP 491
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/528 (39%), Positives = 304/528 (57%), Gaps = 44/528 (8%)
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
DVY + L+ Y K G V VFD M R+ VS+N+LI C+ NG + AL+V VRM
Sbjct: 88 DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G +P + + + + AC+ L + G QIH R++ + N V NA+ DMYAKCG +
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFV-RNAMTDMYAKCGDI 206
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASS------------------------------ 334
++AR +FD M +NVVS M+SGY K +
Sbjct: 207 DKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAY 266
Query: 335 -----VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
V AR +F K+ +++ + W +I GY QNG E+A LF + R +V P YT
Sbjct: 267 FRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTIS 326
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+++++CA LA L G+ H VV G+ ++ + V ++L+DMY KCG D IF
Sbjct: 327 SMVSSCAKLASLYHGQVVHGKVVVMGI------DNSMLVSSALVDMYCKCGVTLDARVIF 380
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
ETM R+ ++WNAMI+G AQNG EAL L+++M KPD++T +GVL AC +A +V+
Sbjct: 381 ETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVK 440
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EG+KYF S+S EHG+AP DHY CM+ LLGR+G +D+A LI+ MP +P+ IW +LL+
Sbjct: 441 EGQKYFDSIS-EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSV 499
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C ++ E A L E++P N+GPY++LSN+YA GRW +V VR LM+++ K
Sbjct: 500 C-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFA 558
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+E+ V+ F+ +D HP +IY L L ++++GY P+ +
Sbjct: 559 AYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTN 606
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 259/489 (52%), Gaps = 52/489 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
+ +L+ C R+ +R+ + + + F + FI N+L+ +YAK G L A+ VFD M
Sbjct: 25 YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNM 84
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ ++V++WN++++ K G +++ +F MP RD S+N++++ FA + +AL V
Sbjct: 85 TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLV 144
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M + F ++YS +AL AC+ +D + G Q+H + + + ++ +A+ DMY KCG
Sbjct: 145 RMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCG 204
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR +FDGM ++N+VSWN +I+ Y + G ++ + +F M SG++PD VT+++V++
Sbjct: 205 DIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLN 264
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A F+ G AR + + + D + ++ YA+ G+ +A +F M RNV
Sbjct: 265 -----AYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVK 319
Query: 321 SE----TSMVSGYAKASSVK-----------------------------------SARLM 341
+ +SMVS AK +S+ AR++
Sbjct: 320 PDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVI 379
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F M RNV++WNA+I GY QNG+ EAL L+ +++E+ P + TF +L+AC N +
Sbjct: 380 FETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMV 439
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV-ERDWVSW 460
+ G++ + +HG+ D + +I + + GSV+ + + M E ++ W
Sbjct: 440 KEGQKYFDSISEHGI----APTLDHYA--CMITLLGRSGSVDKAVDLIQGMPHEPNYRIW 493
Query: 461 NAMIVGCAQ 469
+ ++ CA+
Sbjct: 494 STLLSVCAK 502
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 32/209 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++ SC + S+ + VH +++ + + + + L+D+Y KCG AR +F
Sbjct: 321 DSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIF 380
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M +NV TWN+ M+ G+AQ+ + EAL
Sbjct: 381 ETMPIRNVITWNA-------------------------------MILGYAQNGQVLEALT 409
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M ENF +F LSAC + K G + +S+ + + + +I + G
Sbjct: 410 LYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLG 469
Query: 198 KCGRVSCARRVFDGM-RERNIVSWNSLIT 225
+ G V A + GM E N W++L++
Sbjct: 470 RSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 44/216 (20%)
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+ L+ CA D ++ +H + + D F+ N L+ +Y K G + D
Sbjct: 25 YTRLVLHCARANDFIQAKRLQSH-----MELNLFQPKDSFIHNQLLHLYAKFGKLSDAQN 79
Query: 448 IFETMVERDWVSWNAM------------------------------IVGC-AQNGYGTEA 476
+F+ M +RD SWN + ++ C A NG+ +A
Sbjct: 80 VFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKA 139
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TC 533
L + +M G +P + + L ACS + G++ + +A L ++
Sbjct: 140 LKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIV----VADLGENTFVRNA 195
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
M D+ + G +D+A+ L + M + + V W +++
Sbjct: 196 MTDMYAKCGDIDKARLLFDGM-IDKNVVSWNLMISG 230
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 309/507 (60%), Gaps = 8/507 (1%)
Query: 170 GTQVHAL-LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
G VH + L + V +G+AL+ Y ++ AR +FD M +R++VSW +L+ Y
Sbjct: 159 GEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYA 218
Query: 229 QNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+ G A +A VF RM+ A G++P+EVTL +VVSA + G ++ R + +
Sbjct: 219 RRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVY-RYVADGGVGRS 277
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ L NAL+DM+ K G AR VFD M +++V S T+MV+ YAK ++SA +F M
Sbjct: 278 VNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPR 337
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
RN VSW+ +IA Y+Q + EEA+ LF+ + E V P + ++L+ACA L L LGR
Sbjct: 338 RNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWI 397
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ + V G L+ + +GN+ ID+Y KCG + ++F M ER+ VSWN+MI+
Sbjct: 398 YDNYVISGKAVLT-----VNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAH 452
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
A +G E L LF+++ PD +T +G+L ACSH+GLV EGR+YF M +G+ P
Sbjct: 453 AVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPK 512
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CM+DLLG+ G L+EA + + MPM+ D WG+LL AC+++ N+ +GE+ A KL+
Sbjct: 513 SEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLV 572
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
++ P +SG YVL+S +YA +W +V +R LMR+RGV K PGCS IE+ G + F+V D
Sbjct: 573 QLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVAD 632
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVP 674
H +++IY LK + +K GYVP
Sbjct: 633 VSHVHSEDIYAALKNIYFHLKWEGYVP 659
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 208/467 (44%), Gaps = 55/467 (11%)
Query: 34 SVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
S S VH +K A + + N L+ YA L AR +FD+M +++V +W +++
Sbjct: 155 SPSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLV 214
Query: 93 TGLLKWGFIDDASRLFASMP-----ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
G + G D+A R+F M + ++ + ++VS Q A G V +
Sbjct: 215 DGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLL--AFGRMVYRY---- 268
Query: 148 ALSEYSFGSALSACAGSVDF--KMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+++ G +++ +D K G A + S DVY + +++ Y KCG +
Sbjct: 269 -VADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLES 327
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A R+FD M RN VSW+ +I Y Q +A+ +F M+ G+EP L SV+SACA
Sbjct: 328 AARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQ 387
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L G I+ + K + LGNA +D+YAKCG + A +F M RNV
Sbjct: 388 LGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNV----- 442
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
VSWN++I + +G++EE L LF LK + P
Sbjct: 443 --------------------------VSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPD 476
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
TF LL+AC++ + GR+ ++ + G E +ID+ K G +E+
Sbjct: 477 EITFLGLLSACSHSGLVSEGRRYFKE-----MKLIYGIEPKSEHYACMIDLLGKIGLLEE 531
Query: 445 GCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+ + M +E D W A++ C YG +G F L P
Sbjct: 532 AFEVAKGMPMETDEAGWGALLNACRM--YGNVEIGEFAADKLVQLNP 576
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/677 (32%), Positives = 363/677 (53%), Gaps = 42/677 (6%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+ +++ A LD + LL + +++HAR+I E ++ ++L+ +Y+K
Sbjct: 12 IHRLLTSAAGLDCGIYGHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSK 71
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
L AR VFD++ +KN F S+N+M+ +
Sbjct: 72 TNHLAFARYVFDQIPHKNTF-------------------------------SYNAMLISY 100
Query: 127 AQHDRFSEALGYFVKMHSENFA--LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
+ H+R +AL F + S N +S +LS+ S D K+G +VH + ++ + +
Sbjct: 101 SLHNRHGDALDLFSSLASSNLVNNISITCLLKSLSSFTLS-DVKLGKEVHGFVLRTGFDA 159
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
DV++ +ALI Y KC + +R+VFD M +R++VSWNS+I+ Y Q G D ++ M+
Sbjct: 160 DVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMV 219
Query: 245 A-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
SG P+ VT+ SV+ AC G+++H + + ++ D+ + NAL+ +YAKCG
Sbjct: 220 DFSGFRPNGVTVVSVLQACGQTQDLAFGMEVH-KFIVDNQVEIDISVCNALIGLYAKCGS 278
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
L+ AR +FD M ++ V+ +++SG V + +F M + + +WNA+I G QN
Sbjct: 279 LDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQN 338
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
+E L L R ++ P T ++L+ A + L+ G++ H++ +K G
Sbjct: 339 NRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIK------IGYH 392
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
+I+V ++IDMY K G + R+F+ +R V W A+I A +G ALGLF +M
Sbjct: 393 RNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEM 452
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
L G +PD VT VL AC+H G+V++ + F SM K++G+ PL +HY C+V LG+A
Sbjct: 453 LKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARR 512
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNM 603
L EAK + MP++P A +WG+LL + ++ LG+ V L EIEP N+G YV+++N+
Sbjct: 513 LSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANL 572
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
Y++ GRW E VR+ M K G+ K PG SWIE + F+ D +EI+++LK L
Sbjct: 573 YSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVILKGL 632
Query: 664 TREMKRVGYVPNASDDE 680
M+ G V DE
Sbjct: 633 LGLMRDEGKVLQDMLDE 649
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 317/555 (57%), Gaps = 7/555 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +LF +P+ D+ +NS++ + EAL M +E++ L ACA
Sbjct: 63 ARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACAR 122
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
++ H ++ K + V++G+AL+ Y G + +RR FD M +RN+VSWNS+
Sbjct: 123 VQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSM 182
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y Q G +A +F M G+ DE TL S++ AC++ + G +H+ L+
Sbjct: 183 INGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLL-VRG 241
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
R DL+L NALVDMY KCG L A FD MP +N VS TSM+ AK +S+ +AR F
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ E++++SWNA+I+ Y Q G EAL L+ +K + P +T +L+AC L DL
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H + + + + NSL+DMY +CG V+ +F M ++ +SWNA+
Sbjct: 362 GKMIHDCIRD------NFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAI 415
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I A +G +AL F+ M+ PD +T + +L AC+H GL+E G+ YF +M +
Sbjct: 416 IGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYN 475
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P +HY CMVDLLGR G L +A LI+ MPM+PD V+WG+LL AC++H +I +G+ V
Sbjct: 476 VKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVI 535
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
K+LLE+E + G +VL+SNM E +W ++ R+RKLMR+ G+ K G S IE +++
Sbjct: 536 KQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHES 595
Query: 644 MVKDKRHPLNKEIYL 658
+ H + ++Y+
Sbjct: 596 GAEGIGHESSDDMYV 610
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 218/501 (43%), Gaps = 112/501 (22%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF LL +C R ++ H ++K F ++F+ N L+ YA G L
Sbjct: 114 PF--LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSL---------- 161
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
D+ R F M +R+ SWNSM++G+AQ EA F
Sbjct: 162 ---------------------GDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFE 200
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + E++ S L AC+ + + G VH+ L D+ + +AL+DMYGKCG
Sbjct: 201 GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCG 260
Query: 201 -------------------------------RVSCARRVFDGMRERNIVSWNSLITCYEQ 229
+ AR F+ + E++I+SWN++I+CY Q
Sbjct: 261 DLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQ 320
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL+++ RM G+ PDE TLA+V+SAC L G IH +R +
Sbjct: 321 GGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIH-DCIRDNFHNPGVA 379
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N+L+DMYA+CG+++ A +F MP +NV+
Sbjct: 380 LFNSLLDMYARCGQVDTAISLFSEMPSKNVI----------------------------- 410
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR---Q 406
SWNA+I +G ++AL FR + ++ P TF LL+AC + L+ G+ Q
Sbjct: 411 --SWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQ 468
Query: 407 AHTHV--VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAM 463
A HV VK G+ + ++D+ + G + + + M R D V W A+
Sbjct: 469 AMRHVYNVKPGVEHYA----------CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGAL 518
Query: 464 IVGCAQNGYGTEALGLFKKML 484
+ C +G+ + K++L
Sbjct: 519 LGACRIHGHIQIGKQVIKQLL 539
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 3/365 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL +C ++ + VH+ ++ ++ + N L+D+Y KCG L A F
Sbjct: 210 DEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCF 269
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M KN +W S++ L K ID A F +PE+ SWN+M+S + Q RF EAL
Sbjct: 270 DMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALD 329
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M A E++ + LSAC D G +H + + ++ V + ++L+DMY
Sbjct: 330 LYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYA 389
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG+V A +F M +N++SWN++I +G A DAL F M+ PDE+T +
Sbjct: 390 RCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVA 449
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC + G + ++ + +VD+ + G+L +A + MP+R
Sbjct: 450 LLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMR 509
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN--ALIAGYTQNGENEEALGLFR 374
+VV +++ ++ + + ++LE +S LI+ E + R
Sbjct: 510 PDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLR 569
Query: 375 LLKRE 379
L RE
Sbjct: 570 KLMRE 574
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 185/405 (45%), Gaps = 71/405 (17%)
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR++FD + + + +NSLI Y + +AL + M+ GI P+E TL ++
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLL 117
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA + A++ + H +++ + +GNAL+ YA G L ++R FD M RNV
Sbjct: 118 KACARVQAWEHVMVTHGVVVKL-GFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNV 176
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS SM++GYA+A G EA LF ++R+
Sbjct: 177 VSWNSMINGYAQA-------------------------------GNTREACSLFEGMRRQ 205
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ +T +LL AC+ +L+ G+ H+H++ G R D+ + N+L+DMY KC
Sbjct: 206 GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRI------DLILANALVDMYGKC 259
Query: 440 G-------------------------------SVEDGCRIFETMVERDWVSWNAMIVGCA 468
G S++ FE + E+ +SWNAMI
Sbjct: 260 GDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYV 319
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
Q G EAL L+ +M L G PD T+ VL AC G + G K +++ P
Sbjct: 320 QGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASG-KMIHDCIRDNFHNPGV 378
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ ++D+ R G +D A +L MP + + + W +++ A +H
Sbjct: 379 ALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMH 422
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 245/726 (33%), Positives = 354/726 (48%), Gaps = 111/726 (15%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
H + KS S I++ N ++ Y+KC F+ G
Sbjct: 21 THCQAFKSGIISHIYVANNILFRYSKC------------------FS-----------GD 51
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ A +LF MP +D +WN+M++G+ + A + M F Y+FGS L
Sbjct: 52 LNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKG 111
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
A + +G QVH+L+ K Y VY GSAL+DMY KC RV A VF GM RN VSW
Sbjct: 112 VAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSW 171
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LI + Q G A + M G+ ++ T A +++ +K +Q+H ++++
Sbjct: 172 NALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIK 231
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFD-RMPIRNVVSETSMVSGYAKASSVKSAR 339
L L NA + Y++CG L +A+ VFD + R++V+ SM+ Y + A
Sbjct: 232 -HGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAF 290
Query: 340 LMFTKM---------------------------------------LERNVVSWNALIAGY 360
+F +M LE +V NALI Y
Sbjct: 291 NLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMY 350
Query: 361 TQ--NGENEEALGLFRLLKRESVCPTH-------------------------------YT 387
+ N E AL LF +K + + Y
Sbjct: 351 LKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYA 410
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+ +L +C++LA LQLG+Q H VK G +S+ FV +SLI MY KCG +ED +
Sbjct: 411 YSAVLRSCSDLAILQLGQQIHLLTVKTGF------DSNDFVASSLIFMYSKCGIIEDAWK 464
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
FE + ++WN+++ AQ+G G AL LF M K DHVT + VL ACSH GL
Sbjct: 465 CFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGL 524
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
VE+GR SM ++G+ P +HY C VDL GRAG L+EAK LI++MP QP+A++ +LL
Sbjct: 525 VEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLL 584
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC+ NI L VA +LLE+EP YV+LSNMY L RW + V +LMR+R V K
Sbjct: 585 GACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKK 644
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQNG 687
PG SWIE+ V+ F +D+ HP ++++Y +L L EMKR+ + AS D + N
Sbjct: 645 VPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMKRLHSL--ASFDSLMHDVNH 702
Query: 688 SNSTSD 693
+SD
Sbjct: 703 MYPSSD 708
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 194/446 (43%), Gaps = 85/446 (19%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ FA LL K T ++H +IIK + N + Y++CG L A++V
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260
Query: 77 FD-KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FD + +++ TWNS++ L HD+ +A
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYL-------------------------------VHDKDEDA 289
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F++M F Y++ +SAC + G HAL+ K V + +ALI M
Sbjct: 290 FNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITM 349
Query: 196 YGKCGRVS--CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K S A +F M+ ++ VSWNS++T + Q G + DAL++F M +S E D+
Sbjct: 350 YLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDY 409
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA-RCVFD 312
++V+ +C+ LA + G QIH ++ ND V ++L+ MY+KCG + +A +C D
Sbjct: 410 AYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFV-ASSLIFMYSKCGIIEDAWKCFED 468
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
K SS+ +MF Y Q+G+ + AL L
Sbjct: 469 T----------------TKESSITWNSIMF----------------AYAQHGQGDVALDL 496
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F +++ V H TF +L AC +H +V+ G L ESD + +
Sbjct: 497 FSIMREREVKLDHVTFVAVLTAC-----------SHVGLVEQGRCVLKSMESDYGIPPRM 545
Query: 433 ------IDMYMKCGSVEDGCRIFETM 452
+D++ + G +E+ + ++M
Sbjct: 546 EHYACAVDLFGRAGYLEEAKALIDSM 571
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 366/677 (54%), Gaps = 59/677 (8%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ LL SC KS+ +++HA I F + + + +L+ Y+ F +++
Sbjct: 45 SSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSS----------FSLLAD 94
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
+ T NS I L W N ++S + + EAL + +M
Sbjct: 95 AHTITVNSDIVNPLPW---------------------NLLISSYVNNGLHGEALSAYREM 133
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YSSDVYMGSALIDMYGKCGR 201
+ +++ S L AC +D G +VH ++ + + ++Y+ ++L+ MYGK G
Sbjct: 134 VHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGE 193
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR+F+ M ER+ VSWN +I+ Y G +A E+F M +G E + +T ++
Sbjct: 194 LDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGG 253
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA-------KCGKLNEA---RCVF 311
C FK L++ +++ RC+ DL ++ + A K G + A R F
Sbjct: 254 CVQTRNFKGALELLSQMRRCDI---DLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCF 310
Query: 312 DRMP-IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
D +RN ++++ Y++ ++ A ++F + +++ +WN++++GYT +EEA
Sbjct: 311 DGFDNVRN-----ALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEAS 365
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LFR + + P + T ++L CA +A+LQ G++ H ++++ G E + + N
Sbjct: 366 FLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRR-----EGFEDYLLLWN 420
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SL++MY + G V R+F+++ RD V++ ++I G G G AL LF +M+ KP
Sbjct: 421 SLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKP 480
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D VTM+ VL ACSH+GLV EG F MS +G+ P +H++CMVDL GRAG L++AK +
Sbjct: 481 DQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKV 540
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I +MP +P +W +L+ AC++H N +GE+ A+KLLE++P N G YVL++NM+A GRW
Sbjct: 541 ITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRW 600
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
++ VR MR GV K PGC+W+++ + F+V D + ++Y +L+ LT MK
Sbjct: 601 SKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDA 660
Query: 671 GYVPN---ASDDEAYEE 684
GYV +S+DE EE
Sbjct: 661 GYVAGENFSSEDEVLEE 677
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 206/439 (46%), Gaps = 17/439 (3%)
Query: 139 FVKMH--SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+K+H S N +S S L +C G Q+HA + + + + L+ Y
Sbjct: 27 LIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFY 86
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
++ A + N + WN LI+ Y NG +AL + M+ G+ PD T
Sbjct: 87 SSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYP 146
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC G ++H + R +L + N+LV MY K G+L+ AR +F++MP
Sbjct: 147 SVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPE 206
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGL 372
R+ VS ++S YA K A +F +M E N+++WN + G Q + AL L
Sbjct: 207 RDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALEL 266
Query: 373 FRLLKRESV--CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
++R + P G L AC+++ ++LG H ++ V N
Sbjct: 267 LSQMRRCDIDLDPVAMIIG--LGACSHIGAIKLGTVIHASAIRSCFDGFDN------VRN 318
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+LI MY +C + +F+++ + +WN+M+ G EA LF++ML G +P
Sbjct: 319 ALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEP 378
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
++VT+ +L C+ +++G+++ + + G + +V++ R+G + AK +
Sbjct: 379 NYVTIASILPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRV 438
Query: 551 IEAMPMQPDAVIWGSLLAA 569
+++ + D V + SL+A
Sbjct: 439 FDSL-RRRDKVTYTSLIAG 456
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 335/620 (54%), Gaps = 40/620 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ ++F S I L K G I A RLF MP +D +WN+M++ ++Q +AL F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N ++F + LSACAG + + G ++HA + S S + +G++LIDMYGKC
Sbjct: 62 MRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLS 121
Query: 202 VSCARRVF-------------------------------DGMRERNIVSWNSLITCYEQN 230
+ ARRVF DGM ++ ++WN +I+ Y Q
Sbjct: 122 ATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQC 181
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G L +F +M ++PD+ T +++V+A L G +H +++ ++ + +
Sbjct: 182 GDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKA-VEV 240
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N+++ Y+K G ++ VF+ + I VS +M+ + K A L+F E+NV
Sbjct: 241 SNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNV 300
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
VSW ++I GY +NG E+AL F + + P +TFG +L+AC++LA L G+ H
Sbjct: 301 VSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGS 360
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++ +G + + VGN L++MY KCG ++ F+ ++ +D VSWNAM+ G +
Sbjct: 361 IIHYGFH------AYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMH 414
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G+ T+AL L+++M+ G KPD VT IG+L CSH+GL+E+G+ F SM +GL+ +H
Sbjct: 415 GHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEH 474
Query: 531 YTCMVDLLGRAGCLDEAKTLIE--AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
CMVDLLGR G L +A+ L++ + + + + +LL AC H + +G + + L
Sbjct: 475 VVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKV 534
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
EP YVLLSN+Y G+W E VRK M GV K PGCSWIE+ V VF+ +
Sbjct: 535 FEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNH 594
Query: 649 RHPLNKEIYLVLKMLTREMK 668
HP +E+ +L L EM+
Sbjct: 595 SHPYMEELCKILNFLKFEMR 614
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 191/419 (45%), Gaps = 63/419 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L +C + ++HA+++ S S + + N LID+Y KC AR+VF
Sbjct: 70 DRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVF 129
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++MS N +W S++ G D A +F MP++ + +WN M+SG+ Q LG
Sbjct: 130 EEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLG 189
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM ++ +++F + ++A + G +H + KS + V + ++++ Y
Sbjct: 190 LFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYS 249
Query: 198 KCGRVSCARRVFDGM-------------------------------RERNIVSWNSLITC 226
K G +VF+ + E+N+VSW S+IT
Sbjct: 250 KLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITG 309
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y +NG AL FV+MM + I+PD+ T +V+ AC+SLA G IH ++
Sbjct: 310 YARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIH-YGFHA 368
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+ +GN LV+MYAKCG ++ + F ++L
Sbjct: 369 YVDVGNGLVNMYAKCG-------------------------------DIQGSNTAFKEIL 397
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+++VSWNA++ G +G +AL L+ + + P TF LL C++ ++ G+
Sbjct: 398 GKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQ 456
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 161/308 (52%), Gaps = 1/308 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ L+++ + S +H IIKS + + + N ++ Y+K GC KVF
Sbjct: 202 DQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVF 261
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +WN++I +K G +A +F PE++ SW SM++G+A++ +AL
Sbjct: 262 ESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALS 321
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+FVKM + +++FG+ L AC+ G +H + + + V +G+ L++MY
Sbjct: 322 FFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYA 381
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + F + +++VSWN+++ +G A+ ALE++ M+ASG++PD+VT
Sbjct: 382 KCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIG 441
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C+ ++G + ++ L + +VD+ + G L +AR + D R
Sbjct: 442 LLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYS-R 500
Query: 318 NVVSETSM 325
+ETS+
Sbjct: 501 TGRAETSL 508
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 347/655 (52%), Gaps = 79/655 (12%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
G A P LL SC KSV + +++HA IIK+ + + + C
Sbjct: 19 GSSANFHEFPQLLLLSSC---KSVREIKQIHASIIKANTTRS----TTTLPIISLC---- 67
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWG--FIDDASRLFASMPERDQCS------WNSMV 123
+ IT LL+ D L+ + + C +N+++
Sbjct: 68 ------------------TKITSLLQQDVHLADSIQNLWYASSLANFCHQNPVYIFNAII 109
Query: 124 SGFA-QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
+ ++ F+ + +M + Y+ L AC+ S F Q+HA K+
Sbjct: 110 QSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGL 169
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
SS++++ + L+ Y G + +VFD +++SW +LI Y + G S+A+ F R
Sbjct: 170 SSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFR 229
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKC 301
M + D +TL V+SAC+ L F G +I A + + +D+ LGNAL+DMY KC
Sbjct: 230 MNCTA---DRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKC 286
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G+ + AR +F MP++N+VS SM+SG A
Sbjct: 287 GQPHLARQLFHLMPVKNLVSWNSMISGLA------------------------------- 315
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
G +EAL +FR ++ + P T +LN+CANL DL+LG+ H+++ K+ ++
Sbjct: 316 HQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMK---- 371
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D +V N+L+DMY KCGS++ +F+ M +D S+ AMIVG A +G AL +F
Sbjct: 372 --ADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFS 429
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+M G +PDHVT++GVL ACSHAGL+EEGR++F MS+ + L P +HY CMVDLLGRA
Sbjct: 430 EMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRA 489
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G + EA+ MP+ PDA +WGSLL ACK+H + LGE V +KL+E+EP G Y+L+S
Sbjct: 490 GLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMS 549
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
N+Y+ RW + ++ RK M++ + K PGCS IE+ G V+ F +K HP ++E+
Sbjct: 550 NIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSHPKSREM 604
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 306/559 (54%), Gaps = 73/559 (13%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+I K +D+A ++F S+P SWN +++GF Q ++A+ M F
Sbjct: 12 NSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFE 71
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+E ++ + L++C + D V AR +
Sbjct: 72 PNEVTYSNLLASCIKARD-----------------------------------VHSARAM 96
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD + ++ +WN+L++ Y Q D +E+F RM ++PD TLA ++S+C+ L
Sbjct: 97 FDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGIL 156
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G Q+H+ +R L ND+ + + LVDMY+KCG++ AR +
Sbjct: 157 DFGRQVHSASVRF-LLHNDMFVASGLVDMYSKCGQIGIARSI------------------ 197
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
F KM ER+VV WN++I+G T + N+EA F+ ++ + PT ++
Sbjct: 198 -------------FNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSY 244
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+++N+C+ L+ + GRQ H V+K G + +++VG++LIDMY KCG+++D
Sbjct: 245 ASMINSCSRLSSIPHGRQIHAQVMKDGY------DQNVYVGSALIDMYAKCGNMDDARLF 298
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+TM+ ++ V+WN MI G AQNG G +A+ LF+ ML +KPD VT I VL CSH+GLV
Sbjct: 299 FDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLV 358
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++ +F+SM +G+ PL +HYTC++D LGRAG E + LI MP + D +IW LLA
Sbjct: 359 DKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 418
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC VH N LG+ A+ L I+P N PYVLLSN+YA LGR G+ VR LM RGVVK
Sbjct: 419 ACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKG 478
Query: 629 PGCSWIEILGHVNVFMVKD 647
G SWI+ V FMV D
Sbjct: 479 RGYSWIDQKDGVRAFMVAD 497
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 203/382 (53%), Gaps = 47/382 (12%)
Query: 50 FASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG--------------- 94
F S+ + N LID+Y KC + A KVF+ + + + +WN +ITG
Sbjct: 4 FGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLS 63
Query: 95 -LLKWGF-------------------IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+ + GF + A +F + +WN+++SG+ Q ++ +
Sbjct: 64 LMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQD 123
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+ F +M +N + LS+C+ G +DF G QVH+ + +D+++ S L
Sbjct: 124 TIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDF--GRQVHSASVRFLLHNDMFVASGL 181
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+DMY KCG++ AR +F+ M ER++V WNS+I+ + +A + F +M +GI P E
Sbjct: 182 VDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTE 241
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+ AS++++C+ L++ G QIHA++M+ + ++ +G+AL+DMYAKCG +++AR FD
Sbjct: 242 SSYASMINSCSRLSSIPHGRQIHAQVMK-DGYDQNVYVGSALIDMYAKCGNMDDARLFFD 300
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVSWNALIAGYTQNGENEE 368
M ++N+V+ M+ GYA+ A +F ML + + V++ A++ G + +G ++
Sbjct: 301 TMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDK 360
Query: 369 ALGLFRLLKRE-SVCP--THYT 387
A+ F ++ + P HYT
Sbjct: 361 AMAFFNSMENSYGIIPLAEHYT 382
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC + + R+VH+ ++ +++F+ + L+D+Y+KCG + AR +F
Sbjct: 139 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 198
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM+ ERD WNS++SG H EA
Sbjct: 199 NKMT-------------------------------ERDVVCWNSIISGLTIHSLNKEAFD 227
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +E S+ S +++C+ G Q+HA + K Y +VY+GSALIDMY
Sbjct: 228 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 287
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR FD M +NIV+WN +I Y QNG A+E+F M+ + +PD VT +
Sbjct: 288 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIA 347
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ C+ + + + + L+D + G+ E + +MP +
Sbjct: 348 VLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCK 407
Query: 318 N 318
+
Sbjct: 408 D 408
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 112/265 (42%), Gaps = 33/265 (12%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
G SD VGNSLIDMY KC +++ ++FE++ VSWN +I G Q G +A+ +
Sbjct: 3 GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVL 62
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
M G +P+ VT +L +C A V R F +S+ P + ++ +
Sbjct: 63 SLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISR-----PSVTTWNTLLSGYCQ 117
Query: 541 AGCLDEAKTLIEAMP---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN---- 593
+ L M +QPD +L++C + G V + N
Sbjct: 118 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFV 177
Query: 594 -SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
SG L +MY++ G+ G + M +R VV W I+ + + H L
Sbjct: 178 ASG----LVDMYSKCGQIGIARSIFNKMTERDVV-----CWNSIISGLTI-------HSL 221
Query: 653 NKEIYLVLKMLTREMKRVGYVPNAS 677
NKE + K +M+ G +P S
Sbjct: 222 NKEAFDFFK----QMRENGIMPTES 242
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 356/690 (51%), Gaps = 80/690 (11%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
T + HARI+KS ++ +I +LI Y SN N F
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASY----------------SNYNCF----------- 66
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+DA + S+P+ S++S++ + F++++G F +M S + +
Sbjct: 67 ----NDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNL 122
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-- 215
CA FK+G Q+H + S D ++ ++ MY +CGR+ AR+VFD M ++
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 216 ---------------------------------NIVSWNSLITCYEQNGPASDALEVFVR 242
NIVSWN +++ + ++G +A+ +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+ G PD+VT++SV+ + G IH +++ L++ V+ +A++DMY K G
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSG 301
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT----KMLERNVVSWNALIA 358
+ +F++ + + ++G ++ V A MF + +E NVVSW ++IA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G QNG++ EAL LFR ++ V P H T ++L AC N+A L GR H V+ L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL- 420
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
++ VG++LIDMY KCG + +F M ++ V WN+++ G + +G E +
Sbjct: 421 -----DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F+ ++ KPD ++ +L AC GL +EG KYF MS+E+G+ P +HY+CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EA LI+ MP +PD+ +WG+LL +C++ N+ L E A+KL +EP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSN+YA G W EV +R M G+ K PGCSWI++ V + DK HP +I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITE 655
Query: 659 VLKMLTREMKRVGYVPN---ASDDEAYEEQ 685
+ +++EM++ G+ PN A D +EQ
Sbjct: 656 KMDEISKEMRKSGHRPNLDFALHDVEEQEQ 685
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 198/421 (47%), Gaps = 71/421 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS L C + +++H S + F+Q + +Y +CG + ARKVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D+MS+K+V T ++++ + G +++ R+ + M E + SWN ++SGF +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ F K+H F + + S L + S MG +H + K D + SA+I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 194 DMYGKCGR-------------------------------VSCARRVFDGMRER----NIV 218
DMYGK G V A +F+ +E+ N+V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I QNG +ALE+F M +G++P+ VT+ S++ AC ++AA G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R L N + +G+AL+DMYAKCG++N ++ VF+ MP +N+V
Sbjct: 415 VRVHLLDN-VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV------------------ 455
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
WN+L+ G++ +G+ +E + +F L R + P +F +LL+AC +
Sbjct: 456 -------------CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 399 A 399
Sbjct: 503 G 503
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 334/621 (53%), Gaps = 55/621 (8%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ Y G AR++FD+MS +NV +WN +++G +K I +A +F MPER+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW +MV G+ Q EA F +M N FG + G +D +++ ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD--GRID--KARKLYDMM 167
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
DV + +I + GRV AR +FD MRERN+V+W ++IT Y QN A
Sbjct: 168 P----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++F M E EV+ S ++LG
Sbjct: 224 KLFEVM----PEKTEVSWTS------------------------------MLLG------ 243
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y G++ +A F+ MP++ V++ +M+ G+ + + AR +F M +R+ +W +I
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
Y + G EAL LF ++++ V P+ + ++L+ CA LA LQ GRQ H H+V+
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF- 362
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ D++V + L+ MY+KCG + +F+ +D + WN++I G A +G G EAL
Sbjct: 363 -----DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M G P+ VT+I +L ACS+AG +EEG + F SM + + P +HY+C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG +D+A LIE+M ++PDA +WG+LL ACK H + L E AKKL E EP N+G Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHPLNKEI 656
VLLS++ A +WG+V VRK MR V K PGCSWIE+ V++F K HP I
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
++L+ ++ GY P+ S
Sbjct: 598 LMMLEKTDGLLREAGYSPDCS 618
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 215/508 (42%), Gaps = 104/508 (20%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I+ L + G I++A + F S+ + SWNS+VSG+ + EA F +M N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----- 78
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
V + L+ Y K + AR VF+
Sbjct: 79 ----------------------------------VVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN+VSW +++ Y Q G +A +F RM E +EV+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWT--------------- 145
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
V+ L+D G++++AR ++D MP+++VV+ T+M+ G +
Sbjct: 146 -----------------VMFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
V ARL+F +M ERNVV+W +I GY QN + A LF ++ + T ++ ++
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSM 240
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L LG + F + N++I + + G + R+F+
Sbjct: 241 L----------LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M +RD +W MI + G+ EAL LF +M G +P ++I +L C+ ++ G
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 512 RKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
R+ + + + D + ++ + + G L +AK + + + D ++W S+++
Sbjct: 351 RQVHAHLVR----CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIIS 405
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
H LGE K E+ S + P
Sbjct: 406 GYASHG---LGEEALKIFHEMPSSGTMP 430
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VHA +++ QF ++++ + L+ +Y KCG L A+ VFD+ S+K+
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFV 140
+ WNSII+G G ++A ++F MP ++ + ++++ + + E L F
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 141 KMHSE---NFALSEYSFGSALSACAGSVDFKM 169
M S+ + YS + AG VD M
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/642 (34%), Positives = 348/642 (54%), Gaps = 76/642 (11%)
Query: 39 RRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
R VHA ++++ +I + N L+++YAKCG
Sbjct: 402 REVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA---------------------------- 433
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
ID A R+F M RD+ SWN++++ Q+ A+ + M + S ++ S
Sbjct: 434 ---IDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISG 490
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
LS+CAG G Q+H K D + +AL+ MYG+CGR+S +F+ M ++
Sbjct: 491 LSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDV 550
Query: 218 VSWNSLITCY-EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
VSWNS++ P +++++VF MM SG+ P++VT + ++A L+ + G QIH+
Sbjct: 551 VSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHS 610
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+++ + D + NAL+ YAK G V
Sbjct: 611 VMLK-HGVTEDNAVDNALMSCYAKSG-------------------------------DVD 638
Query: 337 SARLMFTKML-ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
S +F++M R+ +SWN++I+GY NG +EA+ L+ H TF +LNAC
Sbjct: 639 SCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNAC 698
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A++A L+ G + H GLR S ESD+ V ++L+DMY KCG ++ ++F +M ++
Sbjct: 699 ASVAALERGMEMHAF----GLR--SHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQK 752
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
+ SWN+MI G A++G G +AL +F++M GE PDHVT + VL ACSHAGLVE G YF
Sbjct: 753 NEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYF 812
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV--H 573
M +++G+ P +HY+C++DLLGRAG LD+ + ++ MPM+P+ +IW ++L AC+ H
Sbjct: 813 ELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKH 871
Query: 574 R-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
R I LG ++ LLE+EP N YVL S +A +GRW + + R M+ V K+ G S
Sbjct: 872 RAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRS 931
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
W+ + V+ F+ D+ HP KEIY L L ++++ GYVP
Sbjct: 932 WVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVP 973
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 163/563 (28%), Positives = 258/563 (45%), Gaps = 86/563 (15%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P A +L R + +H ++K ++F+ N L++ YAK L AR+VFD M
Sbjct: 67 PHADVLLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGM 126
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASM-PERDQCSWNSMVSGFAQHDRFSEALGYF 139
+N +W +I+G + G +DA LF +M E C S
Sbjct: 127 PGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTS------------------ 168
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGSALIDMYG 197
++FGS L AC S ++G QVH L+SK+ ++S+ + +ALI MYG
Sbjct: 169 ------------FTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYG 216
Query: 198 KC--GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIE--PD 251
C G A+RVFD R++++WN+L++ Y + G A +F M SGIE P
Sbjct: 217 SCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPT 276
Query: 252 EVTLASVVSACASLAAFKEGL--QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
E T S+++A L++ GL Q+ R+++ +DL +G+ALV +A+ G L+EA+
Sbjct: 277 EHTFGSLITA-TYLSSCSLGLLDQLFVRVLK-SGCSSDLYVGSALVSAFARHGMLDEAKD 334
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
++ + RN V+ N LIAG + E A
Sbjct: 335 IYLGLKERN-------------------------------AVTLNGLIAGLVKQQHGEAA 363
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLAD----LQLGRQAHTHVVKHGLRFLSGEESD 425
+F + R+S T+ LL+A A + L+ GR+ H HV++ G +
Sbjct: 364 AEIF-MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIY-----RK 417
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
I V N L++MY KCG+++ CR+F+ M RD +SWN +I QNGY A+ + M
Sbjct: 418 IAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ 477
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
P + I L +C+ GL+ G++ K GL +V + G G +
Sbjct: 478 NSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKW-GLYLDTSVSNALVKMYGECGRMS 536
Query: 546 EAKTLIEAMPMQPDAVIWGSLLA 568
E + +M D V W S++
Sbjct: 537 ECWEIFNSMSAH-DVVSWNSIMG 558
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 262/577 (45%), Gaps = 78/577 (13%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A L SC S+ ++ R++KS +S++++ + L+ +A+ G L A+ ++ +
Sbjct: 286 ATYLSSC----SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKE 341
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
+N T N +I GL+K + A+ +F M RD + N + +V +
Sbjct: 342 RNAVTLNGLIAGLVKQQHGEAAAEIF--MGARDSAAVN---------------VDTYVVL 384
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGR 201
S A++E+S + G +VHA +L + + + L++MY KCG
Sbjct: 385 LS---AIAEFS--------TAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA 433
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A RVF M R+ +SWN++IT +QNG A+ + M + I P S +S+
Sbjct: 434 IDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSS 493
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L G Q+H ++ L D + NALV MY +CG+++E +F+ M
Sbjct: 494 CAGLGLLAAGQQLHCDAVKW-GLYLDTSVSNALVKMYGECGRMSECWEIFNSMS------ 546
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY-TQNGENEEALGLFRLLKRES 380
+VVSWN+++ + E++ +F + +
Sbjct: 547 -------------------------AHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSG 581
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF N L A L+ L+LG+Q H+ ++KHG+ D V N+L+ Y K G
Sbjct: 582 LVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGV------TEDNAVDNALMSCYAKSG 635
Query: 441 SVEDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
V+ R+F M RD +SWN+MI G NG+ EA+ M+ + DH T VL
Sbjct: 636 DVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVL 695
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+ +E G + + + H + + + +VD+ + G +D A + +M Q +
Sbjct: 696 NACASVAALERGMEMHAFGLRSHLESDVVVE-SALVDMYSKCGRIDYASKVFHSMS-QKN 753
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
W S+++ H LG + E++ S P
Sbjct: 754 EFSWNSMISGYARHG---LGRKALEIFEEMQESGESP 787
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 224/495 (45%), Gaps = 92/495 (18%)
Query: 17 LDSSPFAKL--LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
+ S FA + L SC ++ +++H +K + + N L+ +Y +CG +
Sbjct: 480 IGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECW 539
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
++F+ MS +V +WNSI+ M S A +E
Sbjct: 540 EIFNSMSAHDVVSWNSIM---------------------------GVMASSQAP---ITE 569
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
++ F M ++ +F + L+A ++G Q+H+++ K + D + +AL+
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMS 629
Query: 195 MYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G V R+F M R+ +SWNS+I+ Y NG +A++ MM S D
Sbjct: 630 CYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHC 689
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T + V++ACAS+AA + G+++HA +R L +D+V+ +ALVDMY+KCG+++ A VF
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLR-SHLESDVVVESALVDMYSKCGRIDYASKVFHS 748
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M +N S SM+SGYA+ +G +AL +F
Sbjct: 749 MSQKNEFSWNSMISGYAR-------------------------------HGLGRKALEIF 777
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS-----GEESDIFV 428
++ P H TF ++L+AC +H +V+ GL + G I
Sbjct: 778 EEMQESGESPDHVTFVSVLSAC-----------SHAGLVERGLDYFELMEDYGILPRIEH 826
Query: 429 GNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGY------GTEALGLFK 481
+ +ID+ + G ++ + M ++ + + W ++V C Q+ + GTEA
Sbjct: 827 YSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEA----S 882
Query: 482 KMLLCGEKPDHVTMI 496
+MLL E + V +
Sbjct: 883 RMLLELEPQNPVNYV 897
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 236/555 (42%), Gaps = 108/555 (19%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+H + K + D+++ + L++ Y K R+ ARRVFDGM RN VSW LI+ + +G
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 233 ASDALEVFVRMM--ASGIEPDEVTLASVVSACASLAAFKEG--LQIHARLMRCEKLRNDL 288
DA +F M+ G P T SV+ AC + G +Q+H + + E N
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206
Query: 289 VLGNALVDMYAKC--GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
V NAL+ MY C G A+ VFD P+R++++
Sbjct: 207 VC-NALISMYGSCSVGPPILAQRVFDTTPVRDLIT------------------------- 240
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRES----VCPTHYTFGNLLNACANLADLQ 402
WNAL++ Y + G+ LFR ++ + + PT +TFG+L+ A L+
Sbjct: 241 ------WNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITA-TYLSSCS 293
Query: 403 LG--RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
LG Q V+K SG SD++VG++L+ + + G +++ I+ + ER+ V+
Sbjct: 294 LGLLDQLFVRVLK------SGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTL 347
Query: 461 NAMIVGCAQNGYGTEALGLF--KKMLLCGEKPDHVTMIGVLCACSHA--GLVEEGRKYFS 516
N +I G + +G A +F + +V ++ + S A GL +GR+ +
Sbjct: 348 NGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGL-RKGREVHA 406
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA------- 569
+ + + +V++ + G +D+A + + M + D + W +++ A
Sbjct: 407 HVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEAR-DRISWNTIITALDQNGYC 465
Query: 570 -------CKVHRNIM----------------LGEYVAKKLLEIEPSNSGPYV------LL 600
C + +N + LG A + L + G Y+ L
Sbjct: 466 EAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNAL 525
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
MY E GR E + M VV SW I+G ++ + P+ + + +
Sbjct: 526 VKMYGECGRMSECWEIFNSMSAHDVV-----SWNSIMG-----VMASSQAPITESVQVFS 575
Query: 661 KMLTREMKRVGYVPN 675
M+ + G VPN
Sbjct: 576 NMM-----KSGLVPN 585
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 321/576 (55%), Gaps = 43/576 (7%)
Query: 104 ASRLFASM-PERDQCSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGSALSAC 161
AS LF+ + P + ++N M+ + AL F +M S + + + ++F +C
Sbjct: 67 ASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSC 126
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
A H+L+ K SD + +LI MY +CGRV+ AR+VFD + R++VSWN
Sbjct: 127 ANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWN 186
Query: 222 SLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
S+I Y + G A +A+EVF M G EPDE++L SV+ AC L + G + ++
Sbjct: 187 SMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 246
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
N + G+AL+ MYAKCG L AR +FD M R+V++ +++SGYA
Sbjct: 247 RGMTLNSYI-GSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYA---------- 295
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
QNG +EA+ LF +K + V T +L+ACA +
Sbjct: 296 ---------------------QNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGA 334
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L LG+Q + + G + DIFV +LIDMY KCGS+ R+F+ M +++ SW
Sbjct: 335 LDLGKQIDEYASQRGF------QHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASW 388
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
NAMI A +G EAL LF+ M G +P+ +T +G+L AC HAGLV EG + F M
Sbjct: 389 NAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMM 448
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
S GL P +HY+CMVDLL RAG L EA LIE MP +PD V G+LL AC+ +N+ +
Sbjct: 449 STLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDI 508
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
GE V + +LE++PSNSG Y++ S +YA L W + R+R LMR++G+ K PGCSWIE+
Sbjct: 509 GERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVEN 568
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
H++ F D + ++ ++ +L E+KR GYVP
Sbjct: 569 HLHEFHAGDGLCLDSIDLSNIIDLLYEELKREGYVP 604
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 163/359 (45%), Gaps = 49/359 (13%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFA--KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQN 58
++ R+ +V LA L S P L+ R V+ R+V I + S N
Sbjct: 132 LSPARAAHSLVFKLA-LHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS----WN 186
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVF-------------------------------- 86
+I YAK GC A +VF +M ++ F
Sbjct: 187 SMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 246
Query: 87 ---TWNSIITGLL-----KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
T NS I L K G + A R+F M RD +WN+++SG+AQ+ EA+
Sbjct: 247 RGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISL 306
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F M + ++ + + LSACA +G Q+ S+ + D+++ +ALIDMY K
Sbjct: 307 FHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 366
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTLA 256
CG ++ A+RVF M ++N SWN++I+ +G A +AL +F M G P+++T
Sbjct: 367 CGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFV 426
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++SAC EG ++ + L + + +VD+ A+ G L EA + ++MP
Sbjct: 427 GLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMP 485
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 339/621 (54%), Gaps = 75/621 (12%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ NVF +++ K G ID A +F ++P R+ +W ++++G++Q + AL F +
Sbjct: 169 DANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGR 228
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + SA SAC+G + G Q+H ++ SD + +ALID+Y KC R
Sbjct: 229 MGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSR 288
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ ARR+FD M RN+VSW ++I Y QN ++A+ +F ++ +G +PD S++++
Sbjct: 289 LLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNS 348
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKL-----------RNDLVLG 291
C SLAA +G Q+HA +++ CE L +D +
Sbjct: 349 CGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISY 408
Query: 292 NALVDMYAKCGKLNEARCVFDRM-----------------------------PIRNVV-- 320
NA+++ YA+ G L A +F +M I ++
Sbjct: 409 NAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468
Query: 321 --------SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ ++++ Y+K S V A+L+F+ M R++V WNA+I G QN EEA+ L
Sbjct: 469 SGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKL 528
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L+ + P +TF L+ + LA + G+Q H ++K +G +SD + N+L
Sbjct: 529 FARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIK------AGADSDPHISNAL 582
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E+G +FE+ + +D + WN+MI AQ+G+ EAL +F M G +P++
Sbjct: 583 IDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNY 642
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
VT + VL AC+HAGLV+EG +F+SM ++ + P +HY +V+L GR+G L AK IE
Sbjct: 643 VTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIE 702
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++P A IW SLL+AC + N+ +G Y + L +P++SGP VL+SN+YA G W +
Sbjct: 703 RMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWAD 762
Query: 613 VVRVRKLMRKRGVVKQPGCSW 633
++R+ M GVVK+PG SW
Sbjct: 763 AQKLRQGMDCAGVVKEPGYSW 783
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 279/557 (50%), Gaps = 86/557 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRV----HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
A+LL SCL + RRV HAR + S ++F+ N L+ Y+K G L AR++F
Sbjct: 32 LAQLLLSCLAGDRL---RRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLF 88
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M ++N+ +W S I+ + G DDA LFA+ P S
Sbjct: 89 DSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAAS------------------- 129
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +E+ SAL ACA S + G QVH + +K ++V++G+AL+++Y
Sbjct: 130 ------PDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K GR+ A VFD + RN V+W ++IT Y Q G A ALE+F RM G+ PD LAS
Sbjct: 184 KAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLAS 243
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
SAC+ L + G QIH R +D + NAL+D+Y KC +L AR +FD M R
Sbjct: 244 AASACSGLGFVEGGRQIHGYAYRTAA-ESDASVVNALIDLYCKCSRLLLARRLFDSMENR 302
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N+VS T+M+ AGY QN + EA+ +F L
Sbjct: 303 NLVSWTTMI-------------------------------AGYMQNSLDTEAMSMFWQLS 331
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P + ++LN+C +LA + GRQ H HV+K L ESD +V N+LIDMY
Sbjct: 332 QAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADL------ESDEYVKNALIDMYA 385
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KC + + +FE + E D +S+NAMI G A+ G T A+ +F KM C KP +T +
Sbjct: 386 KCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVS 445
Query: 498 VLCACSHAGLVEEGRKYFSSMSKE-HGL----APLKDHY--TCMVDLLGRAGCLDEAKTL 550
+L S +E +SK+ HGL D Y + ++D+ + +D+AK L
Sbjct: 446 LLGVSSSRSDLE--------LSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAK-L 496
Query: 551 IEAMPMQPDAVIWGSLL 567
+ ++ D VIW +++
Sbjct: 497 VFSLMQNRDMVIWNAMI 513
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 228/475 (48%), Gaps = 84/475 (17%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L+SC ++ R+VHA +IK+ S+ +++N LID+YAKC L AR VF+ ++
Sbjct: 345 ILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALA--- 401
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
E D S+N+M+ G+A+ + A+ F KM
Sbjct: 402 ----------------------------EDDAISYNAMIEGYARLGDLTGAVEIFGKMRY 433
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ S +F S L + D ++ Q+H L+ KS S D+Y GSALID+Y K V
Sbjct: 434 CSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDD 493
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A+ VF M+ R++V WN++I QN +A+++F R+ SG+ P+E T ++V+ ++
Sbjct: 494 AKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVAST 553
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA+ G Q HA++++ +D + NAL+DMYAKCG + E R +F+ ++V+ S
Sbjct: 554 LASIFHGQQFHAQIIKAGA-DSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNS 612
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+S YA Q+G EEAL +F +++ V P
Sbjct: 613 MISTYA-------------------------------QHGHAEEALHVFGMMEGAGVEPN 641
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN------SLIDMYMK 438
+ TF ++L+AC AH +V GL + ++ V S+++++ +
Sbjct: 642 YVTFVSVLSAC-----------AHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGR 690
Query: 439 CGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF-KKMLLCGEKPD 491
G + E M +E W +++ C + +G +G + +M L + D
Sbjct: 691 SGKLHAAKEFIERMPIEPVATIWRSLLSAC--HLFGNVEIGRYATEMALLADPAD 743
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 35/208 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L+ S+ ++ HA+IIK+ S+ I N LID+YAKCG + R +F+
Sbjct: 544 FVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTL 603
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V WNS M+S +AQH EAL F
Sbjct: 604 GKDVICWNS-------------------------------MISTYAQHGHAEEALHVFGM 632
Query: 142 MHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + +F S LSAC AG VD + +++ +K +++++++G+
Sbjct: 633 MEGAGVEPNYVTFVSVLSACAHAGLVDEGL-HHFNSMKTKYAVEPGTEHYASVVNLFGRS 691
Query: 200 GRVSCARRVFDGMRERNIVS-WNSLITC 226
G++ A+ + M + + W SL++
Sbjct: 692 GKLHAAKEFIERMPIEPVATIWRSLLSA 719
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/603 (34%), Positives = 333/603 (55%), Gaps = 43/603 (7%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I + G +++A LF MPERD +W +M++G+A + S A F +M + +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRS 108
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-RVSCARR 207
+E++ S L +C G VH ++ K +Y+ +AL++MY C + A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFL 168
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F ++ +N V+W +LIT + G L+++ +M+ + + V A AS+ +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDS 228
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G QIHA +++ +++L + N+++D Y +CG L+EA+ F M
Sbjct: 229 VTTGKQIHASVVK-RGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEME------------ 275
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
++++++WN LI+ + ++ EAL +F+ + + P YT
Sbjct: 276 -------------------DKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYT 315
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +L+ ACAN+A L G+Q H + + G ++ + N+LIDMY KCG + D R
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIYRRGFN------KNVELANALIDMYAKCGDIPDSER 369
Query: 448 IFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F + ER + VSW +M++G +GYG EA+ LF KM+ G +PD + + VL AC HAG
Sbjct: 370 VFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAG 429
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVE+G KYF+ M E+G+ P +D Y C+VDLLGRAG + EA L+E MP +PD WG++
Sbjct: 430 LVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Query: 567 LAACKVHRNI-MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
L ACK H++ ++ AKK++E++P G YV+LS +YA G+W E RVRK+MR G
Sbjct: 490 LGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGN 549
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQ 685
K+ G SWIE+ V F V DK P +Y VL +L E K GYVP+ D Y+++
Sbjct: 550 KKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVLGLLIEETKEAGYVPDL-DSLVYDQE 608
Query: 686 NGS 688
G+
Sbjct: 609 VGT 611
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 35/317 (11%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
SV+ +++HA ++K F S + + N ++D Y +CG
Sbjct: 228 SVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCG------------------------- 262
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
++ +A R F M ++D +WN+++S + D SEAL F + S+ F + Y+
Sbjct: 263 ------YLSEAKRYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYT 315
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F S ++ACA G Q+H + + ++ +V + +ALIDMY KCG + + RVF +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIE 375
Query: 214 E-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E RN+VSW S++ Y +G ++A+E+F +M++SGI PD + +V+SAC ++GL
Sbjct: 376 ERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+ + + D + N +VD+ + GK+ EA + +RMP + S + G KA
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Query: 333 SSVKS--ARLMFTKMLE 347
+RL K++E
Sbjct: 496 HKHTGLISRLAAKKVME 512
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 182/392 (46%), Gaps = 51/392 (13%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ + LI Y + G V AR +FD M ER++V+W ++IT Y + S A E F M G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
P+E TL+SV+ +C ++ G +H +++ + L + NAL++MYA C EA
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL-GMEGSLYVDNALMNMYATCSVTMEA 165
Query: 308 R-CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
+F + ++N V+ T+ LI G+T G+
Sbjct: 166 AFLIFRDIKVKNDVTWTT-------------------------------LITGFTHLGDG 194
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L +++ + E+ T Y + A A++ + G+Q H VVK G +S++
Sbjct: 195 IGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGF------QSNL 248
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V NS++D Y +CG + + R F M ++D ++WN +I ++ +EAL +F++
Sbjct: 249 PVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQ 307
Query: 487 GEKPDHVTMIGVLCACSHAGLVE-----EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
G P+ T ++ AC++ + GR Y +K LA ++D+ +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELA------NALIDMYAKC 361
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
G + +++ + + + + V W S++ H
Sbjct: 362 GDIPDSERVFGEIEERRNLVSWTSMMIGYGSH 393
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 9/255 (3%)
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ++ + T+++ Y + V+ AR +F +M ER+VV+W A+I GY + N A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFH 100
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ ++ P +T ++L +C N+ L G H VVK G+ E ++V N+L++
Sbjct: 101 EMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGM------EGSLYVDNALMN 154
Query: 435 MYMKCG-SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY C ++E IF + ++ V+W +I G G G L ++K+MLL
Sbjct: 155 MYATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPY 214
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ + A + V G++ +S+ K G ++D R G L EAK
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVVK-RGFQSNLPVMNSILDFYCRCGYLSEAKRYFHE 273
Query: 554 MPMQPDAVIWGSLLA 568
M D + W +L++
Sbjct: 274 ME-DKDLITWNTLIS 287
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L+ +C +++ +++H RI + F + + N LID+YAKCG + + +VF ++
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIE 375
Query: 82 N-KNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEAL 136
+N+ +W S++ G G+ +A LF M D+ + +++S + L
Sbjct: 376 ERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 137 GYFVKMHSE 145
YF M SE
Sbjct: 436 KYFNVMESE 444
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 348/643 (54%), Gaps = 46/643 (7%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L SC ++S +++H+ + KS S IF++N LI Y KC + AR +FD S +
Sbjct: 59 LKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDP 118
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+ N ++ G +K G +D+A LF MP + S+ +MV G AQ++ + EA+G F M
Sbjct: 119 VSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA 178
Query: 146 NFALSEYSFGSALSA---CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+E + S +SA G ++ +M +HAL K + + + L+ MY C +
Sbjct: 179 GVIPNEVTLASVISAYSHVGGILNCRM---LHALSFKLGLEALNIVATNLVHMYCVCSSL 235
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD--------------- 235
AR +FD + ERN+V+WN ++ Y ++G PA D
Sbjct: 236 GNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIE 295
Query: 236 ----ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
AL ++ M+ +G+ P+EV + ++SAC A EG Q H ++R D +
Sbjct: 296 RLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQA 355
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
++ YA CG++N A F+ +V S +++SG+ + ++ AR +F +M ER+V
Sbjct: 356 T-IIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVF 414
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW+++I+GY+QN + + AL LF + V P T ++ +A A L L GR AH ++
Sbjct: 415 SWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYI 474
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER--DWVSWNAMIVGCAQ 469
+ + + + +LIDMY KCGS+ ++F + +R WNA+I G A
Sbjct: 475 LSNSIPLNDN------LNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAM 528
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G+ +L LF ++ KP+ +T IGVL AC HAGLV+ G KYF M + + P
Sbjct: 529 HGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIK 588
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY CM+DLLGRAG L EA +I MPM+ D VIWG+LLAAC+ H N+ +GE A+ L ++
Sbjct: 589 HYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKL 648
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
+ S+ VLLSN+YA+ GRW + VR+ M+ + + K PGCS
Sbjct: 649 DISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCS 691
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 242/506 (47%), Gaps = 69/506 (13%)
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
E + SAL +C+ + G Q+H+L+ KS S++++ ++LI Y KC +S AR +FD
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 211 G-------------------------------MRERNIVSWNSLITCYEQNGPASDALEV 239
M + VS+ +++ QN +A+ V
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F M +G+ P+EVTLASV+SA + + +HA + ++V N LV MY
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATN-LVHMYC 230
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
C L AR +FD +P RNVV+ M++GY+K+ V AR +F ++ ++VVSW +I G
Sbjct: 231 VCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDG 290
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG---- 415
Y Q EAL ++R + R V P +L++AC + G+Q H +V+ G
Sbjct: 291 YVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCY 350
Query: 416 ---------------------LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
L+F G + + N+LI +++ G +E ++F+ M E
Sbjct: 351 DFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPE 410
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR-- 512
RD SW++MI G +QN AL LF +M+ G +P+ +TM+ V A + G + EGR
Sbjct: 411 RDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWA 470
Query: 513 -KYFSSMSKEHGLAPLKDHYT-CMVDLLGRAGCLDEAKTLIEAMPMQPDAV-IWGSLLAA 569
+Y S S PL D+ ++D+ + G + A L + + +V W +++
Sbjct: 471 HEYILSNS-----IPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICG 525
Query: 570 CKV--HRNIMLGEYVAKKLLEIEPSN 593
+ H N+ L + + + I+P++
Sbjct: 526 LAMHGHANVSLKLFSQLQRVRIKPNS 551
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 160/295 (54%), Gaps = 2/295 (0%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ +C R+ +VS+ ++ H I+++ F FIQ +I YA CG + A F+ S +
Sbjct: 322 LISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDH 381
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WN++I+G ++ G I+ A +LF MPERD SW+SM+SG++Q+++ AL F +M +
Sbjct: 382 VSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVA 441
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+E + S SA A G H + + + + +ALIDMY KCG ++
Sbjct: 442 GGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITI 501
Query: 205 ARRVFDGMRER--NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A ++F +++R ++ WN++I +G A+ +L++F ++ I+P+ +T V+SAC
Sbjct: 502 ALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSAC 561
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
G + + + ++ ++D+ + G+L EA + +MP++
Sbjct: 562 CHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMK 616
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 304/525 (57%), Gaps = 43/525 (8%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
++ + C + G +VH + + Y ++ + LI+MY K + A+ +FD M
Sbjct: 287 TYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKM 346
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
ERN+VSW ++I+ Y A+ + M G+ P+ T +SV+ AC L K
Sbjct: 347 PERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK--- 403
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+H+ +M+ L +D+ + +AL+D+Y+K G+L EA V
Sbjct: 404 QLHSWIMKV-GLESDVFVRSALIDVYSKMGELLEALKV---------------------- 440
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
F +M+ + V WN++IA + Q+ + +EAL L++ ++R T ++L
Sbjct: 441 ---------FREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVL 491
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC +L+ L+LGRQAH HV+K + D+ + N+L+DMY KCGS+ED IF M
Sbjct: 492 RACTSLSLLELGRQAHVHVLKF--------DQDLILNNALLDMYCKCGSLEDAKFIFNRM 543
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
++D +SW+ MI G AQNG+ EAL LF+ M + G KP+H+T++GVL ACSHAGLV EG
Sbjct: 544 AKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGW 603
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
YF SM+ +G+ P ++HY CM+DLLGRA LD+ LI M +PD V W +LL AC+
Sbjct: 604 YYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRA 663
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
+N+ L Y AK++L+++P ++G YVLLSN+YA RW +V VR+ M+KRG+ K+PGCS
Sbjct: 664 RQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCS 723
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
WIE+ ++ F++ DK HP EI L + GYVP+ +
Sbjct: 724 WIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTN 768
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 207/457 (45%), Gaps = 86/457 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS +++L+ CL +V + +RVH I + + + F+ N LI++Y
Sbjct: 284 DSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMY------------- 330
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+K+ +++A LF MPER+ SW +M+S ++ A+
Sbjct: 331 ------------------VKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMR 372
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
M + + ++F S L AC D K Q+H+ + K SDV++ SALID+Y
Sbjct: 373 LLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYS 429
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A +VF M + V WNS+I + Q+ +AL ++ M G D+ TL S
Sbjct: 430 KMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTS 489
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC SL+ + G Q H ++ K DL+L NAL+DMY KCG L +A+ +F+RM +
Sbjct: 490 VLRACTSLSLLELGRQAHVHVL---KFDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKK 546
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+V+S W+ +IAG QNG + EAL LF +K
Sbjct: 547 DVIS-------------------------------WSTMIAGLAQNGFSMEALNLFESMK 575
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF------LSGEESDIFVGNS 431
+ P H T +L AC +H +V G + L G +
Sbjct: 576 VQGPKPNHITILGVLFAC-----------SHAGLVNEGWYYFRSMNNLYGIDPGREHYGC 624
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + ++D ++ M E D V+W ++ C
Sbjct: 625 MLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDAC 661
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/531 (39%), Positives = 307/531 (57%), Gaps = 12/531 (2%)
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV--SCAR 206
L E+ S L C F QVHA + ++ S Y+ + LI M K S
Sbjct: 40 LLEWRLMSILHDC---TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPL 96
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
VF + N W ++I Y G S++ + RM G+ P T +++ AC +
Sbjct: 97 LVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAAL 156
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
G Q+HA+ + +DL +GN+++D+Y KCG L AR VFD M R+VVS T ++
Sbjct: 157 NMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELI 216
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
YAK ++SA +F + +++V+W A++ GY QNG +EAL F+ ++ +
Sbjct: 217 VAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEV 276
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKH-GLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +++ACA QLG H + ++ R G ++ VG++LIDMY KCGS ++
Sbjct: 277 TLAGVISACA-----QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
++FE M ER+ S+++MI+G A +G AL LF ML +P+ VT IG+L ACSHA
Sbjct: 332 YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHA 391
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLVE+GR+ F+ M K G+AP DHY CMVDLLGRAGCL+EA L++ MPM+P+ +WG+
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGA 451
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC++H N + + A +L ++EP+ G Y+LLSN+YA GRW EV ++RK++R++G
Sbjct: 452 LLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGF 511
Query: 626 VKQPGCSWIE-ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
K PGCSW E G ++ F D HP + EI LK L ++ GY PN
Sbjct: 512 KKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPN 562
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 178/309 (57%), Gaps = 7/309 (2%)
Query: 11 VGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQNRLIDVYAKCGC 69
VG ++F F+ L +C + ++ ++VHA+ I+ FAS++++ N +ID+Y KCG
Sbjct: 138 VGPVSFT----FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGF 193
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
L ARKVFD+MS ++V +W +I K+G ++ AS LF +P +D +W +MV+G+AQ+
Sbjct: 194 LGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQN 253
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVY 187
R EAL YF KM E + +SACA K + + +S + S +V
Sbjct: 254 GRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVV 313
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+GSALIDMY KCG A +VF+ M+ERN+ S++S+I Y +G A AL++F M+ +
Sbjct: 314 VGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE 373
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I P++VT ++SAC+ ++G Q+ A++ + + +VD+ + G L EA
Sbjct: 374 IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEA 433
Query: 308 RCVFDRMPI 316
+ MP+
Sbjct: 434 LDLVKTMPM 442
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 216/477 (45%), Gaps = 113/477 (23%)
Query: 36 SDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK--VFDKMSNKNVFTWNSIIT 93
S ++VHA II++ + ++ +LI + K G+ VF +++ N F W +
Sbjct: 56 SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA--- 112
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
M+ G+A SE+ ++ +M + ++
Sbjct: 113 ----------------------------MIRGYALQGLLSESTNFYTRMRRDGVGPVSFT 144
Query: 154 FGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
F + AC +++ +G QVHA + ++SD+Y+G+++ID+Y KCG + CAR+VFD M
Sbjct: 145 FSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEM 204
Query: 213 RERNIVSWNSLI-------------------------------TCYEQNGPASDALEVFV 241
ER++VSW LI T Y QNG +ALE F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN------DLVLGNALV 295
+M G+E DEVTLA V+SACA L A K HA +R R+ ++V+G+AL+
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVK-----HANWIRDIAERSGFGPSGNVVVGSALI 319
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
DMY+KCG +EA VF+ M RNV S +SM+ GYA
Sbjct: 320 DMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA------------------------- 354
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+G AL LF + + + P TF +L+AC++ ++ GRQ + K
Sbjct: 355 ------MHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKF- 407
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
F D + ++D+ + G +E+ + +TM +E + W A++ C +G
Sbjct: 408 --FGVAPSPDHYA--CMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/642 (34%), Positives = 340/642 (52%), Gaps = 70/642 (10%)
Query: 44 RIIKSQFASEIFIQN------RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
++I S ++ F+ + RLI +Y+K G L+ AR +FD + + +
Sbjct: 42 KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQA------- 94
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
P C N+M+ +A R EA+ ++ M ++ +++
Sbjct: 95 --------------PNSFLC--NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFV 138
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L CA + G VH + ++ + SD+++ +AL+DMY KCG + A VFD M R++
Sbjct: 139 LKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDV 198
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V W ++IT YEQ AL +F +M G DE+T SV SA L + + +H
Sbjct: 199 VCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGY 258
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+ D+ +GN++V MYAKCG +V+
Sbjct: 259 AV-LNGFIGDVSVGNSIVGMYAKCG-------------------------------NVER 286
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
ARL+F +M ERN +SWN++++GYTQNG +AL LF ++ P T +++AC+
Sbjct: 287 ARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSY 346
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET--MVER 455
L LGR+ H V+ S + D + N+++DMYMKCG ++ +F + ER
Sbjct: 347 LGSKHLGRKLHNFVIS------SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D SWN +I G +G+G EAL LF +M + G +P+ +T +L ACSHAGL++EGRK F
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ M+K + P HY CMVD+LGRAG L+EA LI+ +P +P +WG+LL AC++H N
Sbjct: 461 ADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
LGE A L ++EP ++G YVL+SN+YA +W EV VR+ M+ RG+ K S IE
Sbjct: 520 TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 579
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+ F D+ P +E+Y ++ L EMK VGYVP+ S
Sbjct: 580 FGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 621
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 219/457 (47%), Gaps = 76/457 (16%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VH +++++ F S++F++ L+D+YAKCG + A +VFD+M ++V W ++IT
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT------- 206
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ Q +R +AL F KM E F E + S SA
Sbjct: 207 ------------------------LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
D +M VH + + DV +G++++ MY KCG V AR VFD M ERN +SW
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
NS+++ Y QNG +DAL +F +M AS +P+ VT +VSAC+ L + G ++H +
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLH-NFVI 361
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI--RNVVSETSMVSGYAKASSVKSA 338
K+ D L NA++DMY KCG L+ A +F+ + R+V S ++SGY
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG-------- 413
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+G +EAL LF ++ E V P TF ++L+AC++
Sbjct: 414 -----------------------VHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 450
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER--D 456
+ GR+ + K +R ++ ++DM + G + + R+ + + R D
Sbjct: 451 GLIDEGRKCFADMTKLSVR------PEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
V W A+++ C +G LG L +P+H
Sbjct: 505 EV-WGALLLACRI--HGNTELGEIAANNLFQLEPEHT 538
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 33/288 (11%)
Query: 301 CGKLNEARCVFDRMPIRNVVSETS-----MVSGYAKASSVKSARLMFTKMLER------- 348
C L + + + R + T ++ Y+K + SAR +F
Sbjct: 35 CTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQA 94
Query: 349 -NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
N N ++ Y G + EA+ L+ ++R V ++T+ +L CA+ G
Sbjct: 95 PNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVV 154
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H VV+ +G SD+FV +L+DMY KCG + D +F+ M+ RD V W AMI
Sbjct: 155 HGQVVR------TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
Q +AL LF+KM G D +T I V A G +GR S HG A L
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLG---DGRMAISV----HGYAVL 261
Query: 528 KDHY------TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+V + + G ++ A+ + + M + + + W S+L+
Sbjct: 262 NGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME-ERNGISWNSMLSG 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 18 DSSPFAKLL--DSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D +P L+ +C S R++H +I S+ + ++N ++D+Y KCG L A +
Sbjct: 331 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 390
Query: 76 VFD--KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+F+ ++ ++V +WN +I SG+ H
Sbjct: 391 MFNNCELGERDVSSWNVLI-------------------------------SGYGVHGHGK 419
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EAL F +M E ++ +F S LSAC+ + G + A ++K ++ + ++
Sbjct: 420 EALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMV 479
Query: 194 DMYGKCGRVSCARRVFDGMRER 215
DM G+ G ++ A R+ + R
Sbjct: 480 DMLGRAGFLNEAFRLIKKIPSR 501
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 339/626 (54%), Gaps = 65/626 (10%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ Y + A +F+KM +N +WN +I+G +K G + +A R+F +MP+R+
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV 118
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD-----FKMGTQ 172
SW SMV G+ ++ +EA F M +N G L G VD F M +
Sbjct: 119 SWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQE--GRVDDARKLFDMMPE 176
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
DV + +I Y + GR+ AR +FD M +RN+V+W ++++ Y +NG
Sbjct: 177 -----------KDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGK 225
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
A ++F M E +EV+ + ++LG
Sbjct: 226 VDVARKLFEVM----PERNEVSWTA------------------------------MLLG- 250
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
Y G++ EA +FD MP++ VV M+ G+ V AR +F M ER+ +
Sbjct: 251 -----YTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGT 305
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W+A+I Y + G EALGLFR ++RE + + ++L+ C +LA L G+Q H +V
Sbjct: 306 WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ S + D++V + LI MY+KCG++ ++F +D V WN+MI G +Q+G
Sbjct: 366 R------SEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGL 419
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G EAL +F M G PD VT IGVL ACS++G V+EG + F +M ++ + P +HY
Sbjct: 420 GEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYA 479
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
C+VDLLGRA ++EA L+E MPM+PDA++WG+LL AC+ H + L E +KL ++EP
Sbjct: 480 CLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPK 539
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHP 651
N+GPYVLLSNMYA GRW +V +R+ ++ R V K PGCSWIE+ V++F D K HP
Sbjct: 540 NAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHP 599
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNAS 677
I +L+ L ++ GY P+ S
Sbjct: 600 EQPIIMKMLEKLGGLLREAGYCPDGS 625
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 203/450 (45%), Gaps = 93/450 (20%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L L+ V D R++ + + ++ +I Y + G L AR +FD+M +N
Sbjct: 154 MLGGLLQEGRVDDARKLFDMMPEK----DVVAVTNMIGGYCEEGRLDEARALFDEMPKRN 209
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V TW ++++G + G +D A +LF MPER++ SW +M+ G+ R EA F M
Sbjct: 210 VVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPV 269
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + +++ MG +G G V
Sbjct: 270 KPVVV---------------------------------CNEMIMG------FGLNGEVDK 290
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
ARRVF GM+ER+ +W+++I YE+ G +AL +F RM G+ + +L SV+S C S
Sbjct: 291 ARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVS 350
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA+ G Q+HA+L+R E DL + + L+ MY KCG L A+ VF+R P+++VV S
Sbjct: 351 LASLDHGKQVHAQLVRSE-FDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNS 409
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M I GY+Q+G EEAL +F + V P
Sbjct: 410 M-------------------------------ITGYSQHGLGEEALNVFHDMCSSGVPPD 438
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE------ESDIFVGNSLIDMYMK 438
TF +L+AC +++ VK GL E I L+D+ +
Sbjct: 439 DVTFIGVLSAC-----------SYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGR 487
Query: 439 CGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
V + ++ E M +E D + W A++ C
Sbjct: 488 ADQVNEAMKLVEKMPMEPDAIVWGALLGAC 517
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 173/385 (44%), Gaps = 48/385 (12%)
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
G GR R + +R + S + I CY +NG A +VF DE L
Sbjct: 2 GHSGRAILRRCMMLQVRLQCTTSSSYAIACYARNGQLDHARKVF----------DETPLP 51
Query: 257 --SVVSACASLAAFKEGLQIHARLMRCEKL-RNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+V S A +AA+ E Q L+ EK+ + + V N L+ + K G L+EAR VFD
Sbjct: 52 HRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDT 111
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
MP RNVVS TSMV GY + V A +F M +NVVSW ++ G Q G ++A LF
Sbjct: 112 MPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLF 171
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ + V N++ L R + K ++ +++
Sbjct: 172 DMMPEKDVV----AVTNMIGGYCEEGRLDEARALFDEMPKR----------NVVTWTAMV 217
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF-----KKMLLCGE 488
Y + G V+ ++FE M ER+ VSW AM++G +G EA LF K +++C E
Sbjct: 218 SGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNE 277
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSM-SKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
++ G V++ R+ F M +++G ++ M+ + R G EA
Sbjct: 278 ---------MIMGFGLNGEVDKARRVFKGMKERDNGT------WSAMIKVYERKGYELEA 322
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKV 572
L M + A+ + SL++ V
Sbjct: 323 LGLFRRMQREGLALNFPSLISVLSV 347
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/621 (35%), Positives = 337/621 (54%), Gaps = 56/621 (9%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ Y + A +FD+M +N ++N +I+G +K G + DA ++F MPER+
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV 115
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW SMV G+ Q EA F +M N G L K+ +
Sbjct: 116 SWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP--- 172
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
DV + + +I Y + GR+ AR +FD M+ RN+ +W ++++ Y +NG A
Sbjct: 173 -----EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVAR 227
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++F M E +EV+ +++
Sbjct: 228 KLFEVM----PERNEVSWTAMLMG------------------------------------ 247
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y + G++ EA +F+ MP++ +V+ M+ + A + AR+MF M ER+ +WNA+I
Sbjct: 248 YTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMI 307
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+ + G + EALGLF ++RE V + ++L+ CA+LA L GRQ H +V+
Sbjct: 308 KVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVR---- 363
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
S + D++V + LI MY+KCG + IF + +D V WN+MI G +Q+G G EAL
Sbjct: 364 --SEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEAL 421
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F M G +PD VT IGVL ACS++G V+EG + F +M + + P +HY CMVDL
Sbjct: 422 NVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDL 481
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG +DEA L+E MPM+PDA++WG+LL AC+ H + L E +KL ++EP N+GPY
Sbjct: 482 LGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPY 541
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHPLNKEI 656
VLLS+MYA GRW +V +RK + +R V+K PGCSWIE+ V++F D K HP I
Sbjct: 542 VLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMI 600
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
+L+ L+ ++ GY P+ S
Sbjct: 601 TQMLEKLSGFLREAGYCPDGS 621
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 210/449 (46%), Gaps = 91/449 (20%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
++ L+ + D +++ I + ++ + +I Y + G L AR++FD+M +N
Sbjct: 151 MIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEMKVRN 206
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
VFTW ++++G K G +D A +LF MPER++ SW +M+ G+ Q R EA F M
Sbjct: 207 VFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPV 266
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + AC + +I +G G +
Sbjct: 267 K-----------WIVAC----------------------------NEMILQFGLAGEMHR 287
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
AR +F+GM+ER+ +WN++I +E+ G +AL +F RM G+ + ++ SV+S CAS
Sbjct: 288 ARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCAS 347
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA+ G Q+HARL+R E DL + + L+ MY KCG L A+ +F+R ++VV S
Sbjct: 348 LASLDHGRQVHARLVRSE-FDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNS 406
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M I GY+Q+G EEAL +F + V P
Sbjct: 407 M-------------------------------ITGYSQHGLGEEALNVFHDMCSSGVQPD 435
Query: 385 HYTFGNLLNACANLADLQLGRQAH-----THVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
TF +L+AC+ ++ G + T+ V+ G+ + ++D+ +
Sbjct: 436 EVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYA----------CMVDLLGRA 485
Query: 440 GSVEDGCRIFETM-VERDWVSWNAMIVGC 467
G V++ + E M +E D + W A++ C
Sbjct: 486 GRVDEAMELVEKMPMEPDAIVWGALLGAC 514
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 188/441 (42%), Gaps = 106/441 (24%)
Query: 190 SALIDMYGKCGRVSCARRVFDG--MRERNIVSWNSLITCYEQNGPASDALEVFVRM---- 243
++ I YG+ G + AR+VFD + +R I SWN++++ Y ++ DAL +F +M
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82
Query: 244 ------MASGI-----------------EPDEVTLASVVSACASLAAFKE---------- 270
M SG E + V+ S+V +E
Sbjct: 83 TVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR 142
Query: 271 -----------GLQIHARLMRCEKL-----RNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
GL +R+ +KL D+V+ ++ Y + G+L+EAR +FD M
Sbjct: 143 RNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEM 202
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+RNV + T+MVSGYAK V AR +F M ERN VSW A++ GYTQ+G +EA LF
Sbjct: 203 KVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFE 262
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ P + + AC + LQ G H +
Sbjct: 263 AM------PVKW-----IVACNEMI-LQFGLAGEMHRAR--------------------- 289
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
+FE M ERD +WNAMI + G EALGLF +M G + +
Sbjct: 290 ------------MMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPS 337
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIE 552
MI VL C+ ++ GR+ + + + +D Y + ++ + + G L AK +
Sbjct: 338 MISVLSVCASLASLDHGRQVHARLVRSEF---DQDLYVASVLITMYVKCGDLVRAKGIFN 394
Query: 553 AMPMQPDAVIWGSLLAACKVH 573
+ D V+W S++ H
Sbjct: 395 RFLFK-DVVMWNSMITGYSQH 414
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 322/558 (57%), Gaps = 42/558 (7%)
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKC--GRVSCARRVFDGMRERNIVSWNSLITCYE 228
TQ+HAL+ +S + D Y+ AL+ Y A +VF + N+ WN +I
Sbjct: 50 TQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCL 109
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM--------- 279
+N A+ + RM+ P++ T ++ AC+ A +EG QIH ++
Sbjct: 110 ENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVH 168
Query: 280 -------------RCEKLR-------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
R E R +D+V N ++D Y KCG L A+ +F +MP++N+
Sbjct: 169 IKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S M++G AK ++ AR +F +M ER+ +SW++++ GY G +EAL +F+ ++RE
Sbjct: 229 GSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE 288
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + ++L AC+N+ + GR H ++ ++ ++ D +G +L+DMY KC
Sbjct: 289 ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL------DAVLGTALLDMYAKC 342
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ G +FE M ER+ +WNAMI G A +G +AL LF K+ KP+ +T++GVL
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAG V++G + F +M + +G+ P +HY CMVDLLGR+G EA+ LI +MPM+P+
Sbjct: 403 TACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPN 462
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL AC++H N L E V K LLE+EP NSG YVLLSN+YA++GR+ +V ++RKL
Sbjct: 463 AAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKL 522
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
M+ RG+ PG S +++ G V+ F + D HP KEIY LK++ ++ G+ P+ S
Sbjct: 523 MKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQV 582
Query: 678 --DDEAYEEQNGSNSTSD 693
D + E++ N S+
Sbjct: 583 LFDIDEEEKETAVNYHSE 600
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 171/335 (51%), Gaps = 34/335 (10%)
Query: 17 LDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ--------------- 57
+D+ P + L +C +++V + R++H ++K S++ I+
Sbjct: 126 IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLED 185
Query: 58 ---------------NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFID 102
N +ID Y KCG L A+ +F +M KN+ +WN +I GL K G +
Sbjct: 186 ARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLG 245
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
DA +LF M ERD+ SW+SMV G+ R+ EAL F +M E + S L+AC+
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G VHA L ++ D +G+AL+DMY KCGR+ VF+ M+ER I +WN+
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I +G A DALE+F ++ ++P+ +TL V++ACA +GL+I +
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ +L +VD+ + G +EA + + MP++
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/693 (34%), Positives = 355/693 (51%), Gaps = 100/693 (14%)
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
I N +I YAK G + AR++FD M +N+ +WNS+I G L ++DA+RLF M +
Sbjct: 46 IVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFK 105
Query: 114 RDQCSW--------------------------------NSMVSGFAQHDRFSEALGYFVK 141
RD SW N++++G+A+ F EA F +
Sbjct: 106 RDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDE 165
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-----DVYMGSALIDM- 195
M +N S+ S LS + ++G Q + + S D Y+G +D
Sbjct: 166 MLVKNVV----SWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSA 221
Query: 196 ---------------------YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ GR++ AR +F+ M +N+VSWN++I Y +
Sbjct: 222 WMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQID 281
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSA---------------------CASLAAFKEGLQ 273
DA ++F+ M E D V+ ++++ A+ A G
Sbjct: 282 DAYKLFMEM----PEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYL 337
Query: 274 IHARLMRCEKLRN-----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
R+ ++ + D V N+++ YA CG+ +EA +F M +++VS +M++
Sbjct: 338 QSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA 397
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
YA+A + A MF +M ERNVVSWN+LI GY QNG EAL F L+K++ P T
Sbjct: 398 YAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTI 457
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L A ANLA L +G Q H +K G +D+FV N+++ MY K G V + +
Sbjct: 458 VCCLRASANLAALNVGVQLHHLTIKTGF------GNDLFVKNAILTMYAKSGRVPEAENV 511
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F + +D VSWN++I G A NG G EA+ LF+ M L G PD VT G+L AC+H G V
Sbjct: 512 FAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFV 571
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++G F SM++ + + P +HY C+++LLGR G L+EA +++ M A IWG+LL
Sbjct: 572 DQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLW 631
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC++H N+ L +Y A++LL +EP N+ YVLLSNM+AE GRW V RVR LM++ KQ
Sbjct: 632 ACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQ 691
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
PGCSWIEI ++ F+ K L EI +LK
Sbjct: 692 PGCSWIEIDNQLHCFLSKAP-PDLRPEICNILK 723
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 166/330 (50%), Gaps = 34/330 (10%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++V N+++ YAK G++ AR +FD MP RN+VS SM++GY V+ A +F +M
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLL--KRESVCPTHYTFGNLLNACANLADLQLG 404
+R++ SW +I YT+ GE E+A LF LL K+++VC G A +L
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAG--------YAKKRLF 156
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R+A + ++ ++ NS++ Y K G ++ G + FE M ER+ VSWN M+
Sbjct: 157 REAKKLFDEMLVK-------NVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMV 209
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G G A FKK+ P+ V+ + +L +H G + E R F+ M ++ +
Sbjct: 210 DGYVGVGDLDSAWMFFKKI----PTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV-A 583
+ + M+ R +D+A L MP + D+V W ++ ++ + +G+ + A
Sbjct: 266 S-----WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAM-----INGYVRVGKLLQA 314
Query: 584 KKLLEIEP-SNSGPYVLLSNMYAELGRWGE 612
+++L + P N + N Y + GR E
Sbjct: 315 REILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K ++ + + S +F N I + G +E+ +F M ER+ V++N+MI A+NG
Sbjct: 1 MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNG 60
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
A LF M + + V+ ++ H LVE+ + F M K + +
Sbjct: 61 RIANARELFDLM----PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-----W 111
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
T M+ R G L++A+ L +P + D V C RN ++ Y K+L
Sbjct: 112 TLMITCYTRIGELEKARELFNLLPDKQDTV--------C---RNALIAGYAKKRLF 156
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 296/532 (55%), Gaps = 46/532 (8%)
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRER--------------------------- 215
S D ++ S+L+ Y + G + AR V DGM R
Sbjct: 52 SRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLER 111
Query: 216 --------NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
N+++WN L++ ++G A DA+ VRM G PD ++ +SA +
Sbjct: 112 MRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGD 171
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G Q+H +++ R D + AL+DMY KCG+ +E VFD +V S ++V+
Sbjct: 172 VAVGEQLHGYVVKA-GCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVA 230
Query: 328 GYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
G ++ + V A +F + +E NVVSW +++A QNG + EA+ LFR ++ E + P
Sbjct: 231 GLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEP 290
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +L A AN+A L GR AH ++ G DI+VG++L+DMY KCG V
Sbjct: 291 NSVTIPCVLPAFANIAALMHGRSAHCFSLRKGF------HHDIYVGSALVDMYAKCGRVR 344
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
D IFE M R+ VSWNAMI G A +G A+ LF+ M EKPD VT VL ACS
Sbjct: 345 DARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACS 404
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
AG EEGR YF+ M +HG++P +HY CMV LLGRAG LD+A +I MP +PD IW
Sbjct: 405 QAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIW 464
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
GSLL +C+VH N++L E A+ L ++EP N+G YVLLSN+YA W V R+R +M+
Sbjct: 465 GSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTV 524
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
G+ K+ GCSWIEI V++ + D HP+ I LK LT EM+R+G+ P+
Sbjct: 525 GLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPS 576
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 228/516 (44%), Gaps = 86/516 (16%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNR 59
M+T+ + ++ L + P +LL S L+S S R S + F+ +
Sbjct: 1 MSTRSTTSSVLNFLRHVSFPPDPRLLPSALKSCSALRLARALHAAAAVAGVSRDAFVASS 60
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK-------WGFIDDASRLFASMP 112
L+ Y + G AR V D M ++ V W+++I WG ++ R+ +
Sbjct: 61 LLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLE---RMRSDGV 117
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
E + +WN +VSG + R +A+ V+MH E F ALSA D +G Q
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQ 177
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD---------------------- 210
+H + K+ D + +ALIDMYGKCGR RVFD
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237
Query: 211 ---GMR----------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+R E N+VSW S++ C QNG +A+++F M + GIEP+ VT+
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ A A++AA G H +R + +D+ +G+ALVDMYAKCG++ +AR +F+ MP R
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLR-KGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR 356
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NVVS +M+ GYA +GE E A+ LFR ++
Sbjct: 357 NVVSWNAMIGGYA-------------------------------MHGEAENAVRLFRSMQ 385
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLIDMY 436
P TF +L AC+ + GR + KHG+ + ++ +
Sbjct: 386 SSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYA------CMVTLL 439
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G ++D I M E D W +++ C +G
Sbjct: 440 GRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHG 475
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
G D FV +SL+ Y++ G+ D + + M R V W+A+I A +G A GL
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
++M G +P+ +T G++ + +G + M E G P +C + +G
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGE-GFLPDATGVSCALSAVGD 168
Query: 541 AG 542
G
Sbjct: 169 VG 170
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 320/559 (57%), Gaps = 51/559 (9%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N I+ K+G I+ A +LF MP+R WN M+SG+ + EA F
Sbjct: 131 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLF-- 188
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MG Q S +V + +I + K G
Sbjct: 189 -------------------------HVMGDQ--------EISRNVITWTTMITGHAKKGN 215
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVS 260
+ AR FD M ER++VSWN++++ Y Q G + + +F M++ G ++PDE T +V+S
Sbjct: 216 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVIS 275
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI---R 317
+C+SL I +L R + + AL+DM+AKCG L A +F+++ + R
Sbjct: 276 SCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR 335
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LL 376
+ V +M+S YA+ + SAR +F KM +R+ VSWN++IAGYTQNGE+ +A+ LF ++
Sbjct: 336 SSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMI 395
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
E P T ++ +AC +L +L LG A + + ++ ++ I V NSLI MY
Sbjct: 396 SSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQI------SISVYNSLISMY 449
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+CGS++D IF+ M RD VS+N +I G A++G+G E++ L KM G +PD +T I
Sbjct: 450 SRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYI 509
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSHAGL+ EG++ F S+ P DHY CM+D+LGRAG L+EA LI++MPM
Sbjct: 510 AILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPM 564
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+P A I+GSLL A +H+ + LGE A KL ++EP NSG YVLLSN+YA GRW + +V
Sbjct: 565 EPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKV 624
Query: 617 RKLMRKRGVVKQPGCSWIE 635
R MRK+GV K G SW+E
Sbjct: 625 RDTMRKQGVKKTTGLSWLE 643
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 214/482 (44%), Gaps = 114/482 (23%)
Query: 43 ARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN-------------------- 82
A ++KS + + +++N ++ +YAK G + ARK+FD+M +
Sbjct: 123 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 182
Query: 83 ---------------KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
+NV TW ++ITG K G + A F MPER SWN+M+SG+A
Sbjct: 183 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA 242
Query: 128 QHDRFSEALGYFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSD 185
Q E + F M S N E ++ + +S+C+ D + V L + +
Sbjct: 243 QGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPN 302
Query: 186 VYMGSALIDMYGKCGRVSC----------------------------------ARRVFDG 211
++ +AL+DM+ KCG + AR +FD
Sbjct: 303 YFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDK 362
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVSACASLAAFKE 270
M +R+ VSWNS+I Y QNG + A+++F M++S +PDEVT+ SV SAC L
Sbjct: 363 MPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGL 422
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +++ ++ + + N+L+ MY++CG + +A +F M R++VS +++SG+A
Sbjct: 423 G-NWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFA 481
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
++G E++ L +K + + P T+
Sbjct: 482 -------------------------------EHGHGMESIELLLKMKEDGIEPDRITYIA 510
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+L AC++ L G++ F S + D+ +IDM + G +E+ ++ +
Sbjct: 511 ILTACSHAGLLGEGQRL----------FESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQ 560
Query: 451 TM 452
+M
Sbjct: 561 SM 562
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 148/271 (54%), Gaps = 9/271 (3%)
Query: 50 FASEIFIQNRLIDVYAKCGCLYGARKVFDKM---SNKNVFTWNSIITGLLKWGFIDDASR 106
F F++ L+D++AKCG L A K+F+++ ++ WN++I+ + G + A
Sbjct: 299 FRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARH 358
Query: 107 LFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEYSFGSALSACAGSV 165
LF MP+RD SWNSM++G+ Q+ +A+ F +M SE+ E + S SAC
Sbjct: 359 LFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLG 418
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ +G ++L ++ + + ++LI MY +CG + A +F M R++VS+N+LI+
Sbjct: 419 ELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLIS 478
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ ++G +++E+ ++M GIEPD +T ++++AC+ EG RL K
Sbjct: 479 GFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEG----QRLFESIKFP 534
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
D+ ++DM + G+L EA + MP+
Sbjct: 535 -DVDHYACMIDMLGRAGRLEEAMKLIQSMPM 564
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/597 (36%), Positives = 322/597 (53%), Gaps = 69/597 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VH +K F S++F+ + +Y KCG L A FD++ NK
Sbjct: 168 VHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENK----------------- 210
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
D +WN+M++G+AQ+ EA+ F +M E F ++ +F L A
Sbjct: 211 --------------DIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKA 256
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
D +G HA + K S DV++ +AL+DMY K + R F M +RN+VS+
Sbjct: 257 STAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSF 316
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+LIT Y G +AL V+ ++ + G+EPD T + S+C+ + EG Q+H ++
Sbjct: 317 NALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVK 376
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L +D+ +GN++V+ Y+KCG + SA
Sbjct: 377 F-GLDSDVSVGNSIVNFYSKCGFTD-------------------------------SALE 404
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
F + N V W +I+G+ QNGE E+AL F +++ ++ +++ A ++ A
Sbjct: 405 AFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAA 464
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++ GR H HV+K GL + I+VG+++IDMY KCG VED ++F M E++ VSW
Sbjct: 465 VEQGRHLHAHVMKSGL------DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSW 518
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+MI G AQNG+ EAL LF++M G P VT +G+L ACSHAGLVEEGR +++ M
Sbjct: 519 NSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVH 578
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+G+ P +H TCMVDLLGRAG L+EA+ + + + IWGSLL+AC VH+N +G
Sbjct: 579 NYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGS 638
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
A+ L +EP S Y LSN+YA W EV R+R LM+ GV K+PGCSWIE L
Sbjct: 639 RAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIESL 695
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 269/552 (48%), Gaps = 75/552 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ + +C +S S +H I+K F++++F+ + LI +Y+K D+
Sbjct: 44 YSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSK----------HDR-- 91
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
I +A LF MPERD SWNSM++G++Q EA G F
Sbjct: 92 -------------------IKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCS 132
Query: 142 M--HSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
M EN+ L S+++ + L AC G ++G VH K + SD+++ + + MY
Sbjct: 133 MINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYC 192
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A FD + ++IV+WN++IT Y QN +A+E+F +M G +P++ T
Sbjct: 193 KCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCC 252
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ A +++ G HA++++ D+ + ALVDMY+K + + F M R
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKL-GCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKR 311
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N+VS +NALI GY+ G+ EEAL ++ L+
Sbjct: 312 NLVS-------------------------------FNALITGYSLMGKYEEALRVYSQLQ 340
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E + P +TF L ++C+ + + G Q H H VK GL +SD+ VGNS+++ Y
Sbjct: 341 SEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGL------DSDVSVGNSIVNFYS 394
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + FE++ + V W +I G AQNG G +AL F KM +K D +
Sbjct: 395 KCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSS 454
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
V+ A S VE+GR + + K GL + ++D+ + G +++A+ + MP +
Sbjct: 455 VIKAVSSWAAVEQGRHLHAHVMKS-GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-E 512
Query: 558 PDAVIWGSLLAA 569
+ V W S++
Sbjct: 513 KNVVSWNSMITG 524
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 224/463 (48%), Gaps = 44/463 (9%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
M E + W S ++ A+ +AL F++M + ++ + +SACA S +
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
T +H L+ K +S+ +++ S LI MY K R+ AR +FD M ER+ VSWNS+I Y Q
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 231 GPASDALEVFVRMMAS----GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
G +A +F M+ S + + TLA+V+ AC L + G +H ++ +
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKI-GFDS 179
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
DL + + V MY KCG L+ A FD++ +++V+ +M++GYA
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYA---------------- 223
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
QN EEA+ LF ++ E P TF +L A ++D +GR
Sbjct: 224 ---------------QNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRC 268
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H V+K G D+FV +L+DMY K +ED R F M +R+ VS+NA+I G
Sbjct: 269 FHAKVLKLGCSM------DVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITG 322
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+ G EAL ++ ++ G +PD T +G+ +CS + V EG + S + GL
Sbjct: 323 YSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQ-VHVHSVKFGLDS 381
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+V+ + G D A E++ +P++V W +++
Sbjct: 382 DVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGIISG 423
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 186/413 (45%), Gaps = 85/413 (20%)
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M E N+V W S IT + G AL F++M+ +GIEP+ +T ++ +SACA
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+H +++ + N L + + L+ MY+K ++ EAR +FD MP R+ VS SM
Sbjct: 61 TSLHCLILK-KGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSM------ 113
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL----KRESVCPTHYT 387
IAGY+Q G NEEA GLF + + + + +T
Sbjct: 114 -------------------------IAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFT 148
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+L AC L ++G+ H + VK G +SD+FV S + MY KCG ++
Sbjct: 149 LATVLKACGGLGCSRIGKCVHGYAVKIGF------DSDLFVSGSTVYMYCKCGILDMAGL 202
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA------ 501
F+ + +D V+WN MI G AQN Y EA+ LF +M L G KP+ T VL A
Sbjct: 203 AFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSD 262
Query: 502 -----CSHAGL------------------------VEEGRKYFSSMSKEHGLAPLKDHYT 532
C HA + +E+ + F MSK + ++ +
Sbjct: 263 SAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS-----FN 317
Query: 533 CMVDLLGRAGCLDEA---KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
++ G +EA + +++ M+PD+ + L ++C V + G V
Sbjct: 318 ALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQV 370
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 31/291 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F L SC S +V++ +VH +K S++ + N +++ Y+KCG A + F
Sbjct: 347 DSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAF 406
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++ N W II SGFAQ+ +AL
Sbjct: 407 ESINRPNSVCWAGII-------------------------------SGFAQNGEGEKALM 435
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM E+S S + A + + G +HA + KS +Y+GSA+IDMY
Sbjct: 436 QFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYS 495
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A++VF M E+N+VSWNS+IT Y QNG +AL +F M +SGI P VT
Sbjct: 496 KCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVG 555
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
++ AC+ +EG + ++ + + +VD+ + G L EA
Sbjct: 556 ILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAE 606
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/652 (35%), Positives = 343/652 (52%), Gaps = 87/652 (13%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
FL SP ++ + S R+ H IK +++ N I A+ G + AR+
Sbjct: 11 FLPRSP--SIIRTIFLPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQ 68
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD+M +++ +WNSIITG K G D++ RLF MP ++ SWNSM++G + +R EA
Sbjct: 69 LFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEA 128
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
YF M N A S+ + +S G V + + L + +V +A++D
Sbjct: 129 WQYFQAMPQRNTA----SWNAMIS---GLVRYDRVEEASRLFEEMP-RRNVISYTAMVDG 180
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + AR +F+ M ++N+VSW +I+ Y +NG +A +F +M PD+
Sbjct: 181 YAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQM------PDK--- 231
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++V A++ Y K GK ++A+ +FD++P
Sbjct: 232 -------------------------------NIVAMTAMITGYCKEGKTDKAKILFDQIP 260
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R++ S +M++GYA QNG EEAL L
Sbjct: 261 CRDLASWNAMITGYA-------------------------------QNGSGEEALKLHSQ 289
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + + P H T ++L AC++LA LQ GR+ H V+K SG ES I + N+LI M
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLK------SGYESRISICNALITM 343
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+ D F + D VSWNAMI A++G+ AL F +M +PD +T
Sbjct: 344 YCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITF 403
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L AC HAG V E +F+SM + + + P +H+ C+VD+L R G +++A +I+ MP
Sbjct: 404 LSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMP 463
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ D IWG+LLAAC VH N+ LGE AKK++E+EP NSG YV+LSN+YA G WGEV R
Sbjct: 464 FEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTR 523
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
VR LMR++GV KQP SW+EI V+ F+ D HP I L LK + +M
Sbjct: 524 VRGLMREQGVKKQPAYSWMEIDNKVHFFLGDDASHPEIHRIRLELKGMKLQM 575
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 317/555 (57%), Gaps = 7/555 (1%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +LF +P+ D+ +NS++ + EAL M +E++ L ACA
Sbjct: 63 ARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACAR 122
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
++ H ++ K + V++G+AL+ Y G + +RR FD M +RN+VSWNS+
Sbjct: 123 VQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSM 182
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y Q G +A +F M G+ DE TL S++ AC++ + G +H+ L+
Sbjct: 183 INGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLL-VRG 241
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
R DL+L NALVDMY KCG L A FD MP +N VS TSM+ AK +S+ +AR F
Sbjct: 242 CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFE 301
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ E++++SWNA+I+ Y Q G EAL L+ +K + P +T +L+AC L DL
Sbjct: 302 QIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLAS 361
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H + + + + NSL+DMY +CG V+ +F M ++ +SWNA+
Sbjct: 362 GKMIHDCIRD------NFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAI 415
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
I A +G +AL F+ M+ PD +T + +L AC+H GL+E G+ YF +M +
Sbjct: 416 IGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYN 475
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ P +HY CMVDLLGR G L +A LI+ MPM+PD V+WG+LL AC++H +I +G+ V
Sbjct: 476 VKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVI 535
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
K+LLE+E + G +VL+SNM E +W ++ R+RKLMR+ G+ K G S IE +++
Sbjct: 536 KQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHES 595
Query: 644 MVKDKRHPLNKEIYL 658
+ H + ++Y+
Sbjct: 596 GAEGIGHESSDDMYV 610
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 218/501 (43%), Gaps = 112/501 (22%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF LL +C R ++ H ++K F ++F+ N L+ YA G L
Sbjct: 114 PF--LLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSL---------- 161
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
D+ R F M +R+ SWNSM++G+AQ EA F
Sbjct: 162 ---------------------GDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFE 200
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + E++ S L AC+ + + G VH+ L D+ + +AL+DMYGKCG
Sbjct: 201 GMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCG 260
Query: 201 -------------------------------RVSCARRVFDGMRERNIVSWNSLITCYEQ 229
+ AR F+ + E++I+SWN++I+CY Q
Sbjct: 261 DLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQ 320
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G +AL+++ RM G+ PDE TLA+V+SAC L G IH +R +
Sbjct: 321 GGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIH-DCIRDNFHNPGVA 379
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L N+L+DMYA+CG+++ A +F MP +NV+
Sbjct: 380 LFNSLLDMYARCGQVDTAISLFSEMPSKNVI----------------------------- 410
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR---Q 406
SWNA+I +G ++AL FR + ++ P TF LL+AC + L+ G+ Q
Sbjct: 411 --SWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQ 468
Query: 407 AHTHV--VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAM 463
A HV VK G+ + ++D+ + G + + + M R D V W A+
Sbjct: 469 AMRHVYNVKPGVEHYA----------CMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGAL 518
Query: 464 IVGCAQNGYGTEALGLFKKML 484
+ C +G+ + K++L
Sbjct: 519 LGACRIHGHIQIGKQVIKQLL 539
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 3/365 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL +C ++ + VH+ ++ ++ + N L+D+Y KCG L A F
Sbjct: 210 DEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCF 269
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M KN +W S++ L K ID A F +PE+ SWN+M+S + Q RF EAL
Sbjct: 270 DMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALD 329
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ +M A E++ + LSAC D G +H + + ++ V + ++L+DMY
Sbjct: 330 LYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYA 389
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG+V A +F M +N++SWN++I +G A DAL F M++ PDE+T +
Sbjct: 390 RCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVA 449
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++SAC + G + ++ + +VD+ + G+L +A + MP+R
Sbjct: 450 LLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMR 509
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN--ALIAGYTQNGENEEALGLFR 374
+VV +++ ++ + + ++LE +S LI+ E + R
Sbjct: 510 PDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLR 569
Query: 375 LLKRE 379
L RE
Sbjct: 570 KLMRE 574
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 185/405 (45%), Gaps = 71/405 (17%)
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR++FD + + + +NSLI Y + +AL + M+ GI P+E TL ++
Sbjct: 58 GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLL 117
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA + A++ + H +++ + +GNAL+ YA G L ++R FD M RNV
Sbjct: 118 KACARVQAWEHVMVTHGVVVKL-GFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNV 176
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS SM++GYA+A G EA LF ++R+
Sbjct: 177 VSWNSMINGYAQA-------------------------------GNTREACSLFEGMRRQ 205
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ +T +LL AC+ +L+ G+ H+H++ G R D+ + N+L+DMY KC
Sbjct: 206 GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRI------DLILANALVDMYGKC 259
Query: 440 G-------------------------------SVEDGCRIFETMVERDWVSWNAMIVGCA 468
G S++ FE + E+ +SWNAMI
Sbjct: 260 GDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYV 319
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
Q G EAL L+ +M L G PD T+ VL AC G + G K +++ P
Sbjct: 320 QGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASG-KMIHDCIRDNFHNPGV 378
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ ++D+ R G +D A +L MP + + + W +++ A +H
Sbjct: 379 ALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMH 422
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/624 (35%), Positives = 348/624 (55%), Gaps = 28/624 (4%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N I A+ G + GAR F+ M + ++N+++ G + D A LF MP RD
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 118 SWNSMVSGFA-QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
S+N+++SG + + +A + S F S SF S L ++
Sbjct: 81 SYNALISGLSLRRQTLPDAAA---ALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQ 137
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ + + S + L+D GRV+ ARR+FD M +R++V+W ++++ Y Q G ++A
Sbjct: 138 MPERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--RLMRCEKLRNDLVLGNAL 294
+F DE+ +VVS A ++ + + +++ +L RN++ L
Sbjct: 194 RALF----------DEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V Y + G + +A +F+ MP V + +M+ G+ + V +A+ +F KM ER+ +W+
Sbjct: 244 VG-YIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWS 302
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I Y QN EAL FR + V P + + ++L CA LA L GR+ H +++
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
+ D+F ++LI MY+KCG+++ R+F T +D V WN+MI G AQ+G G
Sbjct: 363 SF------DMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
+ALG+F M L G PD +T IG L ACS+ G V+EGR+ F+SM+ + P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNS 594
VDLLGR+G ++EA LI+ MP++PDAVIWG+L+ AC++HRN + E AKKLLE+EP N+
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNA 536
Query: 595 GPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK-RHPLN 653
GPYVLLS++Y +GRW + ++RK + R + K PGCSWIE V++F D HP +
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 654 KEIYLVLKMLTREMKRVGYVPNAS 677
I +L+ L + GY + S
Sbjct: 597 AAILRILEKLDGLLMESGYSADGS 620
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 225/484 (46%), Gaps = 74/484 (15%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR +++ D A I F + L+ Y + G L A ++F +M +N ++
Sbjct: 91 LRRQTLPDAAAALASI---PFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYT 147
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
++ GLL G +++A RLF MP+RD +W +M+SG+ Q R +EA F +M N
Sbjct: 148 VLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV- 206
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS------------------------- 184
S+ + +S A + + + ++ ++ + S
Sbjct: 207 ---SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP 263
Query: 185 --DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
V +A++ +G+ G V A+ VF+ MRER+ +W+++I YEQN +AL F
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ G+ P+ ++ S+++ CA+LA G ++HA ++RC D+ +AL+ MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-SFDMDVFAVSALITMYIKCG 382
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
L++A+ VF +++V SM++GYA Q
Sbjct: 383 NLDKAKRVFHTFEPKDIVMWNSMITGYA-------------------------------Q 411
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSG 421
+G E+ALG+F ++ + P T+ L AC+ ++ GR+ ++ V +R G
Sbjct: 412 HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIR--PG 469
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLF 480
E + ++D+ + G VE+ + + M VE D V W A++ C + A
Sbjct: 470 AEH----YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAA 525
Query: 481 KKML 484
KK+L
Sbjct: 526 KKLL 529
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/483 (41%), Positives = 285/483 (59%), Gaps = 8/483 (1%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ L++ Y + G A++VF+ ++ +IVSW LI+ Y A +F + S
Sbjct: 289 HLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHS 348
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G+ PD + VSAC G +H + R E L +D ++GNAL+DMY++ G +
Sbjct: 349 GLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFE-LGSDPIVGNALIDMYSRSGAIEV 407
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A VF M I++V S TS+++G+ K + +++AR +F +M RN VSW A+I GY Q
Sbjct: 408 ACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVP 467
Query: 367 EEALGLFRLLKRESV-CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
L LF+ ++ E PT T +L+ CA++ LG H +V K L D
Sbjct: 468 IPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDL------D 521
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ V N+L+DMY K G++ +IF+ M +RD SW MI G A +G GT AL F M
Sbjct: 522 VTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSK 581
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G P+ VT++ VL ACSHAGLV EGR F M + HG+ P HY CMVDLLGRAG L
Sbjct: 582 SGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLR 641
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EAK LIE MP++PD+VIW SLL+AC VH N+ L E K ++E+EP + G Y+LL N+Y
Sbjct: 642 EAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYC 701
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
RW + ++ RK MR R V K+PGCSW+E+ G V+ F+ +D H + ++Y VL+ +T
Sbjct: 702 SASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITE 761
Query: 666 EMK 668
+MK
Sbjct: 762 QMK 764
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 162/293 (55%), Gaps = 1/293 (0%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ +C K +S+ R VH + + + S+ + N LID+Y++ G + A VF M K+V
Sbjct: 361 VSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDV 420
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+W S++ G +K I+ A R+F MP R+ SW +M++G+ Q + L F +M +E
Sbjct: 421 SSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAE 480
Query: 146 NFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + + LS CA F +G+ VH ++K+ DV + +AL+DMY K G +
Sbjct: 481 GKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVL 540
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A ++F M +R++ SW ++I+ +G + ALE F M SG P+EVTL SV+SAC+
Sbjct: 541 ALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSH 600
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
EG + ++++C ++ + +VD+ + G L EA+ + + MPI+
Sbjct: 601 AGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIK 653
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 200/482 (41%), Gaps = 84/482 (17%)
Query: 66 KCGCLYGARKVFDK------MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
KCG L +++ K + +K ++ + G DA ++F + D SW
Sbjct: 263 KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSW 322
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
++S + + +A F + + A+SAC D G VH ++ +
Sbjct: 323 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFR 382
Query: 180 SRYSSDVYMGSALIDMYG-------------------------------KCGRVSCARRV 208
SD +G+ALIDMY KC + ARR+
Sbjct: 383 FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRI 442
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAA 267
FD M RN VSW ++IT Y Q LE+F M A G + P +T+ +V+S CA + A
Sbjct: 443 FDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGA 502
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
F G +H + + L D+ + NAL+DMYAK G L A +F MP R+V S T+M+S
Sbjct: 503 FDLGSSVHGYVNKTN-LDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMIS 561
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
G A +G+ AL F + + P T
Sbjct: 562 GLA-------------------------------LHGKGTHALEAFSDMSKSGXXPNEVT 590
Query: 388 FGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
++L+AC++ + GR +V+ HG++ I ++D+ + G + +
Sbjct: 591 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIK------PKIQHYGCMVDLLGRAGLLREAK 644
Query: 447 RIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD----HVTMIGVLCA 501
+ E M ++ D V W +++ C +G AL ++ +PD ++ + + C+
Sbjct: 645 ELIEHMPIKPDSVIWRSLLSACLV--HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCS 702
Query: 502 CS 503
S
Sbjct: 703 AS 704
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 343/610 (56%), Gaps = 35/610 (5%)
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
YG RK N F N+++ K G + + L S RD +WN+++S Q++
Sbjct: 227 YGLRK-----GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMG 189
+ EAL Y +M E E++ S L AC+ + G ++HA L + ++G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
SAL+DMY C +V RRVFDGM +R I WN++I Y QN +AL +F+ M S G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ T+A VV AC AF IH +++ L D + N L+DMY++ GK++ A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +M R++V+ +M++GY + + A L+ KM QN E +
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM----------------QNLERKV 504
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+ G R+ S+ P T +L +CA L+ L G++ H + +K+ L +D+ V
Sbjct: 505 SKGASRV----SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL------ATDVAV 554
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
G++L+DMY KCG ++ ++F+ + +++ ++WN +I+ +G G EA+ L + M++ G
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
KP+ VT I V ACSH+G+V+EG + F M ++G+ P DHY C+VDLLGRAG + EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 549 TLIEAMPMQPD-AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L+ MP + A W SLL A ++H N+ +GE A+ L+++EP+ + YVLL+N+Y+
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W + VR+ M+++GV K+PGCSWIE V+ F+ D HP ++++ L+ L M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 668 KRVGYVPNAS 677
++ GYVP+ S
Sbjct: 795 RKEGYVPDTS 804
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 269/574 (46%), Gaps = 87/574 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ F LL + + + +++HA + K + + + + N L+++Y KCG KV
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++S ER+Q SWNS++S +++ AL
Sbjct: 156 FDRIS-------------------------------ERNQVSWNSLISSLCSFEKWEMAL 184
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSAL 192
F M EN S ++ S ++AC+ MG QVHA L K +S ++ + L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTL 242
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MYGK G+++ ++ + R++V+WN++++ QN +ALE M+ G+EPDE
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T++SV+ AC+ L + G ++HA ++ L + +G+ALVDMY C ++ R VFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R + +M++GY++ K A L+F M EE+ GL
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM---------------------EESAGL 401
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
T ++ AC H VVK GL + D FV N+L
Sbjct: 402 L---------ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL------DRDRFVQNTL 446
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-------- 484
+DMY + G ++ RIF M +RD V+WN MI G + + +AL L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 485 ---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KP+ +T++ +L +C+ + +G++ + + ++ LA + +VD+ +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
GCL ++ + + +P Q + + W ++ A +H N
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 226/475 (47%), Gaps = 48/475 (10%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ A +F S R W ++ + + EA+ +V M Y+F + L A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A D ++G Q+HA + K Y D V + + L+++Y KCG +VFD + ERN VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL----QIH 275
WNSLI+ ALE F M+ +EP TL SVV+AC++L EGL Q+H
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVH 225
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A +R +L + ++ N LV MY K GKL
Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKL------------------------------- 252
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
S++++ R++V+WN +++ QN + EAL R + E V P +T ++L AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++L L+ G++ H + +K+G + + FVG++L+DMY C V G R+F+ M +R
Sbjct: 313 SHLEMLRTGKELHAYALKNG-----SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
WNAMI G +QN + EAL LF M G + TM GV+ AC +G ++
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEA 426
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ GL + ++D+ R G +D A + M + D V W +++
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 14/265 (5%)
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
AS+V A +F R+ W L+ ++ EA+ + + + P +Y F L
Sbjct: 45 ASAVSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L A A+L D++LG+Q H HV K G G +S + V N+L+++Y KCG ++F+
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGY----GVDS-VTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE- 510
+ ER+ VSWN++I AL F+ ML +P T++ V+ ACS+ + E
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 511 --GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G++ + ++ L +V + G+ G L +K L+ + + D V W ++L+
Sbjct: 219 MMGKQVHAYGLRKGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLS 275
Query: 569 A-CKVHRNIMLGEYVAKKLLE-IEP 591
+ C+ + + EY+ + +LE +EP
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEP 300
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/641 (33%), Positives = 344/641 (53%), Gaps = 70/641 (10%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
++++V + +L C+ + VHA +IK ++ + + L+++Y++
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSR 299
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
C A +VF + ID+ P+ CS +M+S F
Sbjct: 300 CLSAEEAYEVFIR---------------------IDE--------PDVVHCS--AMISCF 328
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+HD EAL FVKM + Y F + + D + VHA + KS ++
Sbjct: 329 DRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLK 388
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+G A+++MY K G V A FD + E + SWN++++ + L +F +M
Sbjct: 389 GVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACE 448
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G ++ T SV+ C SL + G Q+HA +++ L+ND + LVDMYA+ G
Sbjct: 449 GFSANKYTYVSVLRCCTSLMNLRFGTQVHACILK-SGLQNDTDVSRMLVDMYAQSGCFT- 506
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
SA L+F ++ ER+ SW +++GY + E
Sbjct: 507 ------------------------------SACLVFEQLKERDAFSWTVIMSGYAKTEEA 536
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
E+ + FR + RE++ P+ T L+ C+++A L G Q H+ +K SG S +
Sbjct: 537 EKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIK------SGWNSSV 590
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
G +L+DMY+KCG++ D +F RD V+WN +I G +Q+G+G +AL FK+M+
Sbjct: 591 VSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDE 649
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G++PD +T +GVL ACSHAGL+ EGRKYF S+S +G+ P +HY CMVD+L +AG L E
Sbjct: 650 GKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVE 709
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A++LI MP+ PD+ IW ++L AC++HRNI + E A++L E+EP ++ +LLSN+YA+
Sbjct: 710 AESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYAD 769
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
LGRW +V RVR ++ GV K+PGCSWIEI G +++F+ +D
Sbjct: 770 LGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 264/581 (45%), Gaps = 73/581 (12%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
A L C +++ + +HAR+++S + F+ + L+++Y KCG L
Sbjct: 54 AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLV----------- 102
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
DA R+F MP RD +W +M+S +AL F +M
Sbjct: 103 --------------------DARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARM 142
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ E A + ++ S L AC+G K QVH + K D Y+GS+L++ Y CG +
Sbjct: 143 NQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGEL 202
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A V G+ ER+ VSWN+L+ Y ++G + + +++ASG E + TL +V+ C
Sbjct: 203 DAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCC 262
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
L K G +HA +++ L D VL + LV+MY++C EA VF R+ +VV
Sbjct: 263 MELGLAKYGQSVHASVIK-RGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHC 321
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++M+S + +R+ ++W EAL LF + V
Sbjct: 322 SAMISCF-----------------DRHDMAW--------------EALDLFVKMSGMGVK 350
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P HY F + + D L R H ++VK G L G VG+++++MY+K G+V
Sbjct: 351 PNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKG------VGDAILNMYVKVGAV 404
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+D F+ + E D SWN ++ + L +FK+M G + T + VL C
Sbjct: 405 QDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCC 464
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ + G + + + K GL D +VD+ ++GC A + E + + DA
Sbjct: 465 TSLMNLRFGTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFS 522
Query: 563 WGSLLAA-CKVHRNIMLGEYVAKKLLE-IEPSNSGPYVLLS 601
W +++ K + EY L E I PS++ V LS
Sbjct: 523 WTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLS 563
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 220/444 (49%), Gaps = 44/444 (9%)
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
H+E L +AL CA + G ++HA L +S D ++ +L++MY KCGR+
Sbjct: 46 HAEELRL----HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRL 101
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
ARRVFDGM R+IV+W ++I+ + G + AL++F RM GI P+ TLASV+ AC
Sbjct: 102 VDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKAC 161
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ + K Q+H ++++ L +D +G++LV+ Y CG+L+ A V +P R+ VS
Sbjct: 162 SGGSHSKFTHQVHGQVVKLNGL-DDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSW 220
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++++GYA+ + R+M ++E+ V S + +
Sbjct: 221 NALLNGYARHGDYR--RVMI--IIEKLVASGDEI-------------------------- 250
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
+ YT +L C L + G+ H V+K GL E+D + + L++MY +C S
Sbjct: 251 -SKYTLPTVLKCCMELGLAKYGQSVHASVIKRGL------ETDNVLNSCLVEMYSRCLSA 303
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
E+ +F + E D V +AMI ++ EAL LF KM G KP+H +G+
Sbjct: 304 EEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVA 363
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
S G R + + K G A LK ++++ + G + +A + + +PD
Sbjct: 364 SRTGDANLCRSVHAYIVKS-GFAMLKGVGDAILNMYVKVGAVQDATVTFD-LIHEPDTFS 421
Query: 563 WGSLLAACKVHRNIMLGEYVAKKL 586
W ++L+A N G + K++
Sbjct: 422 WNTILSAFYSGSNCEQGLRIFKQM 445
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 146/312 (46%), Gaps = 32/312 (10%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R KQ+ + + + +L C ++ +VHA I+KS ++ + L+D+Y
Sbjct: 440 RIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMY 499
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
A+ GC A VF+++ ++ F+W I+ S
Sbjct: 500 AQSGCFTSACLVFEQLKERDAFSWTVIM-------------------------------S 528
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G+A+ + + + YF M EN S+ + +LS C+ G Q+H+ KS ++S
Sbjct: 529 GYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNS 588
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
V G AL+DMY KCG ++ A +F R+ V+WN++I Y Q+G AL+ F +M+
Sbjct: 589 SVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMV 647
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G PD +T V+SAC+ EG + L + + +VD+ +K G+L
Sbjct: 648 DEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRL 707
Query: 305 NEARCVFDRMPI 316
EA + ++MP+
Sbjct: 708 VEAESLINQMPL 719
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 343/610 (56%), Gaps = 35/610 (5%)
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
YG RK N F N+++ K G + + L S RD +WN+++S Q++
Sbjct: 140 YGLRK-----GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMG 189
+ EAL Y +M E E++ S L AC+ + G ++HA L + ++G
Sbjct: 195 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 254
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
SAL+DMY C +V RRVFDGM +R I WN++I Y QN +AL +F+ M S G+
Sbjct: 255 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 314
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ T+A VV AC AF IH +++ L D + N L+DMY++ GK++ A
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAM 373
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +M R++V+ +M++GY + + A L+ KM QN E +
Sbjct: 374 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM----------------QNLERKV 417
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+ G R+ S+ P T +L +CA L+ L G++ H + +K+ L +D+ V
Sbjct: 418 SKGASRV----SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL------ATDVAV 467
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
G++L+DMY KCG ++ ++F+ + +++ ++WN +I+ +G G EA+ L + M++ G
Sbjct: 468 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 527
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
KP+ VT I V ACSH+G+V+EG + F M ++G+ P DHY C+VDLLGRAG + EA
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 587
Query: 549 TLIEAMPMQPD-AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L+ MP + A W SLL A ++H N+ +GE A+ L+++EP+ + YVLL+N+Y+
Sbjct: 588 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 647
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W + VR+ M+++GV K+PGCSWIE V+ F+ D HP ++++ L+ L M
Sbjct: 648 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 707
Query: 668 KRVGYVPNAS 677
++ GYVP+ S
Sbjct: 708 RKEGYVPDTS 717
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 269/574 (46%), Gaps = 87/574 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ F LL + + + +++HA + K + + + + N L+++Y KCG KV
Sbjct: 9 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++S ER+Q SWNS++S +++ AL
Sbjct: 69 FDRIS-------------------------------ERNQVSWNSLISSLCSFEKWEMAL 97
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSAL 192
F M EN S ++ S ++AC+ MG QVHA L K +S ++ + L
Sbjct: 98 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTL 155
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MYGK G+++ ++ + R++V+WN++++ QN +ALE M+ G+EPDE
Sbjct: 156 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 215
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T++SV+ AC+ L + G ++HA ++ L + +G+ALVDMY C ++ R VFD
Sbjct: 216 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 275
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R + +M++GY++ K A L+F M EE+ GL
Sbjct: 276 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM---------------------EESAGL 314
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
T ++ AC H VVK GL + D FV N+L
Sbjct: 315 L---------ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL------DRDRFVQNTL 359
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-------- 484
+DMY + G ++ RIF M +RD V+WN MI G + + +AL L KM
Sbjct: 360 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 419
Query: 485 ---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KP+ +T++ +L +C+ + +G++ + + ++ LA + +VD+ +
Sbjct: 420 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 478
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
GCL ++ + + +P Q + + W ++ A +H N
Sbjct: 479 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 41/274 (14%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ GI+PD +++ A A L + G QIHA + + + + + N LV++Y KCG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
VFDR+ RN VS WN+LI+
Sbjct: 61 DFGAVYKVFDRISERNQVS-------------------------------WNSLISSLCS 89
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA---DLQLGRQAHTHVVKHGLRFL 419
+ E AL FR + E+V P+ +T +++ AC+NL L +G+Q H + ++ G
Sbjct: 90 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG---- 145
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
E + F+ N+L+ MY K G + + + RD V+WN ++ QN EAL
Sbjct: 146 ---ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 202
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++M+L G +PD T+ VL ACSH ++ G++
Sbjct: 203 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 236
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 13/214 (6%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P +Y F LL A A+L D++LG+Q H HV K G G +S + V N+L+++Y KCG
Sbjct: 8 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGY----GVDS-VTVANTLVNLYRKCGDF 62
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
++F+ + ER+ VSWN++I AL F+ ML +P T++ V+ AC
Sbjct: 63 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 122
Query: 503 SHAGLVEE---GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
S+ + E G++ + ++ L +V + G+ G L +K L+ + + D
Sbjct: 123 SNLPMPEGLMMGKQVHAYGLRKGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGR-D 179
Query: 560 AVIWGSLLAA-CKVHRNIMLGEYVAKKLLE-IEP 591
V W ++L++ C+ + + EY+ + +LE +EP
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 213
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 343/610 (56%), Gaps = 35/610 (5%)
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
YG RK N F N+++ K G + + L S RD +WN+++S Q++
Sbjct: 227 YGLRK-----GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMG 189
+ EAL Y +M E E++ S L AC+ + G ++HA L + ++G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
SAL+DMY C +V RRVFDGM +R I WN++I Y QN +AL +F+ M S G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ T+A VV AC AF IH +++ L D + N L+DMY++ GK++ A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +M R++V+ +M++GY + + A L+ KM QN E +
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM----------------QNLERKV 504
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+ G R+ S+ P T +L +CA L+ L G++ H + +K+ L +D+ V
Sbjct: 505 SKGASRV----SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL------ATDVAV 554
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
G++L+DMY KCG ++ ++F+ + +++ ++WN +I+ +G G EA+ L + M++ G
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
KP+ VT I V ACSH+G+V+EG + F M ++G+ P DHY C+VDLLGRAG + EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 549 TLIEAMPMQPD-AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L+ MP + A W SLL A ++H N+ +GE A+ L+++EP+ + YVLL+N+Y+
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W + VR+ M+++GV K+PGCSWIE V+ F+ D HP ++++ L+ L M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 668 KRVGYVPNAS 677
++ GYVP+ S
Sbjct: 795 RKEGYVPDTS 804
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 269/574 (46%), Gaps = 87/574 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ F LL + + + +++HA + K + + + + N L+++Y KCG KV
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++S ER+Q SWNS++S +++ AL
Sbjct: 156 FDRIS-------------------------------ERNQVSWNSLISSLCSFEKWEMAL 184
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSAL 192
F M EN S ++ S ++AC+ MG QVHA L K +S ++ + L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTL 242
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MYGK G+++ ++ + R++V+WN++++ QN +ALE M+ G+EPDE
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T++SV+ AC+ L + G ++HA ++ L + +G+ALVDMY C ++ R VFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R + +M++GY++ K A L+F M EE+ GL
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM---------------------EESAGL 401
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
T ++ AC H VVK GL + D FV N+L
Sbjct: 402 L---------ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL------DRDRFVQNTL 446
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-------- 484
+DMY + G ++ RIF M +RD V+WN MI G + + +AL L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 485 ---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KP+ +T++ +L +C+ + +G++ + + ++ LA + +VD+ +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
GCL ++ + + +P Q + + W ++ A +H N
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 226/475 (47%), Gaps = 48/475 (10%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ A +F S R W ++ + + EA+ +V M Y+F + L A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A D ++G Q+HA + K Y D V + + L+++Y KCG +VFD + ERN VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL----QIH 275
WNSLI+ ALE F M+ +EP TL SVV+AC++L EGL Q+H
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVH 225
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A +R +L + ++ N LV MY K GKL
Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKL------------------------------- 252
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
S++++ R++V+WN +++ QN + EAL R + E V P +T ++L AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++L L+ G++ H + +K+G + + FVG++L+DMY C V G R+F+ M +R
Sbjct: 313 SHLEMLRTGKELHAYALKNG-----SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
WNAMI G +QN + EAL LF M G + TM GV+ AC +G ++
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEA 426
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ GL + ++D+ R G +D A + M + D V W +++
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 14/265 (5%)
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
AS+V A +F R+ W L+ ++ EA+ + + + P +Y F L
Sbjct: 45 ASAVSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L A A+L D++LG+Q H HV K G G +S + V N+L+++Y KCG ++F+
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGY----GVDS-VTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE- 510
+ ER+ VSWN++I AL F+ ML +P T++ V+ ACS+ + E
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 511 --GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G++ + ++ L +V + G+ G L +K L+ + + D V W ++L+
Sbjct: 219 MMGKQVHAYGLRKGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLS 275
Query: 569 A-CKVHRNIMLGEYVAKKLLE-IEP 591
+ C+ + + EY+ + +LE +EP
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEP 300
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/689 (33%), Positives = 361/689 (52%), Gaps = 106/689 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ + R KS S +++HA+ I++Q S + +I +Y L+ A +F + +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V W S+I +C F FS+AL FV+M +
Sbjct: 70 VLAWKSVI-----------------------RC--------FTDQSLFSKALASFVEMRA 98
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK------ 198
F S L +C +D + G VH + + D+Y G+AL++MY K
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 199 ---CGRV-------------------SC--------ARRVFDGMRERNIVSWNSLITCYE 228
G V +C RRVF+ M +++VS+N++I Y
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q+G DAL + M + ++PD TL+SV+ + +G +IH ++R + + +D+
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR-KGIDSDV 277
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+G++LVDMYA K++ ++ + +F+++ R
Sbjct: 278 YIGSSLVDMYA-------------------------------KSARIEDSERVFSRLYCR 306
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+ +SWN+L+AGY QNG EAL LFR + V P F +++ ACA+LA L LG+Q H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
+V++ G S+IF+ ++L+DMY KCG+++ +IF+ M D VSW A+I+G A
Sbjct: 367 GYVLRGGF------GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G+G EA+ LF++M G KP+ V + VL ACSH GLV+E YF+SM+K +GL
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+HY + DLLGRAG L+EA I M ++P +W +LL++C VH+N+ L E VA+K+
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++ N G YVL+ NMYA GRW E+ ++R MRK+G+ K+P CSWIE+ + F+ D+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP +I LK + +M++ GYV + S
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 225/458 (49%), Gaps = 45/458 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + F +L SC + VH I++ +++ N L+++YAK G
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 75 KVFDKMSNKNVFTWNSII---TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
VFD+M + + + + T ++ +G ID R+F MP +D S+N++++G+AQ
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ +AL +M + + ++ S L + VD G ++H + + SDVY+GS+
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+DMY K R+ + RVF + R+ +SWNSL+ Y QNG ++AL +F +M+ + ++P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
V +SV+ ACA LA G Q+H ++R +++ + +ALVDMY+KCG + AR +F
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
DRM NV+ E VSW A+I G+ +G EA+
Sbjct: 402 DRM---NVLDE----------------------------VSWTAIIMGHALHGHGHEAVS 430
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +KR+ V P F +L AC+++ + + K + G ++ +
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK-----VYGLNQELEHYAA 485
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCA 468
+ D+ + G +E+ M VE W+ ++ C+
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKS----VSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++V ++ D P + L S L S V + +H +I+ S+++I + L+D+Y
Sbjct: 228 RMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AK + + +VF ++ ++ +WNS++ G ++ G
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG------------------------- 322
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
R++EAL F +M + +F S + ACA +G Q+H + + + S
Sbjct: 323 ------RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
++++ SAL+DMY KCG + AR++FD M + VSW ++I + +G +A+ +F M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G++P++V +V++AC+ + E + + L +L A+ D+ + GKL
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 305 NEARCVFDRM 314
EA +M
Sbjct: 497 EEAYNFISKM 506
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R +Q+V + F+ ++ +C ++ +++H +++ F S IFI + L+D+Y
Sbjct: 329 RLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWN 120
+KCG + ARK+FD+M+ + +W +II G G +A LF M + +Q ++
Sbjct: 389 SKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 448
Query: 121 SMVSGFAQHDRFSEALGYF---VKMHSENFALSEYSFGSALSACAGSVD 166
++++ + EA GYF K++ N L Y+ + L AG ++
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/648 (34%), Positives = 347/648 (53%), Gaps = 82/648 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID-VYAKCGCLYGARKVFD 78
+P LL SK+ S ++HA++I + S+ F +RL+D V +K + A VF
Sbjct: 12 NPLLSLLQX---SKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFA 68
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++ N F N+++ + +S PER AL +
Sbjct: 69 QIHQPNSFICNTMVKCYTE-----------SSTPER--------------------ALRF 97
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M + Y++ L AC G V K + DV++ + LI MY +
Sbjct: 98 YAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCR 157
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG AR VFDG E+++VSWNS++ Y G +A +F M P+
Sbjct: 158 CGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEM------PER------ 205
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK-CGKLNEARCVFDRMPIR 317
D+V + ++D Y K G++N AR FD MP R
Sbjct: 206 ----------------------------DVVSWSIMIDGYGKKMGEVNRARVFFDSMPTR 237
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS SM+ GYAK ++ AR +F KML++NV+SW+ +I GY + +++EAL LFR +
Sbjct: 238 DLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQML 297
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P + ++AC+ L L GR H ++ ++ + DI V +L+DMY+
Sbjct: 298 CQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLL------DIVVQTALVDMYL 351
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS ++ IF +M ER+ VSWN MIVG NG+G EAL F +M + D + +G
Sbjct: 352 KCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLG 411
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHA LV EG F+ M + L P +HY C+VDLLGRAG LD+ + +I++MPM+
Sbjct: 412 VLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMK 471
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+A +WGSLL AC++H+N+ L E V ++L E++ +SG YVL+SN+YA++G W ++R+R
Sbjct: 472 PNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIR 531
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
KLM++R + K G S IE+ G+V F+ +K H L +EI LV+ L +
Sbjct: 532 KLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAK 579
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 209/458 (45%), Gaps = 90/458 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C + + V +K F ++F+ N LI +Y +CG AR VF
Sbjct: 109 DNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVF 168
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D S K++ +WNS++ G + G +++A +F MPERD SW+ M+ G+ +
Sbjct: 169 DGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGK--------- 219
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMY 196
KMG A + S + D+ +++ID Y
Sbjct: 220 ------------------------------KMGEVNRARVFFDSMPTRDLVSWNSMIDGY 249
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + AR +FB M ++N++SW+ +I Y + + +AL +F +M+ GI+PD V++
Sbjct: 250 AKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVV 309
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
VSAC+ L A +G IH + R ++ D+V+ ALVDMY KCG +EAR +F+ MP
Sbjct: 310 GAVSACSQLGALDQGRWIHLYMKR-NRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPE 368
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RNV VSWN +I G NG +EAL F +
Sbjct: 369 RNV-------------------------------VSWNVMIVGLGMNGFGKEALECFXQM 397
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE------ESDIFVGN 430
+ E + F +L AC +H ++V GL + E +
Sbjct: 398 EMERIPMDDLLFLGVLMAC-----------SHANLVTEGLHIFNQMKGVYRLEPKLEHYG 446
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
L+D+ + G ++ I ++M ++ + W ++++ C
Sbjct: 447 CLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLAC 484
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 26/296 (8%)
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY-----AKASSVKSARLMF 342
L L N L+ + ++ + ++ N++S+T S +K +V A L+F
Sbjct: 8 LQLKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVF 67
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
++ + N N ++ YT++ E AL + ++++ + +YT+ +L AC + L
Sbjct: 68 AQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLL 127
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
G VK G D+FV N LI MY +CG +F+ E+D VSWN+
Sbjct: 128 EGGLVQGEAVKRGF------GGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNS 181
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM-IGVLCACSHAGLVEEGRKYFSSMSKE 521
M+ G G A +F +M + D V+ I + G V R +F SM
Sbjct: 182 MLGGYVWCGEMENAQNMFDEM----PERDVVSWSIMIDGYGKKMGEVNRARVFFDSM--- 234
Query: 522 HGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
P +D + M+D + G ++ A+ + + M +Q + + W ++ HR+
Sbjct: 235 ----PTRDLVSWNSMIDGYAKVGEMEVAREIFBKM-LQKNVISWSIMIDGYAXHRD 285
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/678 (34%), Positives = 349/678 (51%), Gaps = 99/678 (14%)
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
I N +I YAK G + AR++FD M +N+ +WNS+I G L ++DA+RLF M +
Sbjct: 46 IVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFK 105
Query: 114 RDQCSW--------------------------------NSMVSGFAQHDRFSEALGYFVK 141
RD SW N++++G+A+ F EA F +
Sbjct: 106 RDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDE 165
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-----DVYMGSALIDM- 195
M +N S+ S LS + ++G Q + + S D Y+G +D
Sbjct: 166 MLVKNVV----SWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSA 221
Query: 196 ---------------------YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ GR++ AR +F+ M +N+VSWN++I Y +
Sbjct: 222 WMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQID 281
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSA---------------------CASLAAFKEGLQ 273
DA ++F+ M E D V+ ++++ A+ A G
Sbjct: 282 DAYKLFMEM----PEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYL 337
Query: 274 IHARLMRCEKLRN-----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
R+ ++ + D V N+++ YA CG+ +EA +F M +++VS +M++
Sbjct: 338 QSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA 397
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
YA+A + A MF +M ERNVVSWN+LI GY QNG EAL F L+K++ P T
Sbjct: 398 YAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTI 457
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L A ANLA L +G Q H +K G +D+FV N+++ MY K G V + +
Sbjct: 458 VCCLRASANLAALNVGVQLHHLTIKTGF------GNDLFVKNAILTMYAKSGRVPEAENV 511
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F + +D VSWN++I G A NG G EA+ LF+ M L G PD VT G+L AC+H G V
Sbjct: 512 FAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFV 571
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++G F SM++ + + P +HY C+++LLGR G L+EA +++ M A IWG+LL
Sbjct: 572 DQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLW 631
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC++H N+ L +Y A++LL +EP N+ YVLLSNM+AE GRW V RVR LM++ KQ
Sbjct: 632 ACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQ 691
Query: 629 PGCSWIEILGHVNVFMVK 646
PGCSWIEI ++ F+ K
Sbjct: 692 PGCSWIEIDNQLHCFLSK 709
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 166/330 (50%), Gaps = 34/330 (10%)
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++V N+++ YAK G++ AR +FD MP RN+VS SM++GY V+ A +F +M
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMF 104
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLL--KRESVCPTHYTFGNLLNACANLADLQLG 404
+R++ SW +I YT+ GE E+A LF LL K+++VC G A +L
Sbjct: 105 KRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAG--------YAKKRLF 156
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R+A + ++ ++ NS++ Y K G ++ G + FE M ER+ VSWN M+
Sbjct: 157 REAKKLFDEMLVK-------NVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMV 209
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G G A FKK+ P+ V+ + +L +H G + E R F+ M ++ +
Sbjct: 210 DGYVGVGDLDSAWMFFKKI----PTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV-A 583
+ + M+ R +D+A L MP + D+V W ++ ++ + +G+ + A
Sbjct: 266 S-----WNAMIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAM-----INGYVRVGKLLQA 314
Query: 584 KKLLEIEP-SNSGPYVLLSNMYAELGRWGE 612
+++L + P N + N Y + GR E
Sbjct: 315 REILNLMPYKNIAAQTAMINGYLQSGRMDE 344
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K ++ + + S +F N I + G +E+ +F M ER+ V++N+MI A+NG
Sbjct: 1 MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNG 60
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
A LF M + + V+ ++ H LVE+ + F M K + +
Sbjct: 61 RIANARELFDLM----PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYS-----W 111
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
T M+ R G L++A+ L +P + D V +L+A R
Sbjct: 112 TLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKR 154
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 344/612 (56%), Gaps = 39/612 (6%)
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
YG RK N F N+++ K G + + L S RD +WN+++S Q++
Sbjct: 223 YGLRK-----GELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNE 277
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMG 189
+F EAL Y +M E ++ S L AC+ + G ++HA L + ++G
Sbjct: 278 QFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 337
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
SAL+DMY C +V RVFDGM +R I WN++IT Y QN +AL +F+ M S G+
Sbjct: 338 SALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGL 397
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ T+A VV AC AF + IH +++ L D + NAL+DMY++ GK++ A+
Sbjct: 398 LANSTTMAGVVPACVRSGAFSKKEAIHGFVVK-RGLDRDRFVQNALMDMYSRLGKIDIAK 456
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM--LERNVVSWNALIAGYTQNGEN 366
+F +M R++V+ ++++GY + + A LM KM LER +
Sbjct: 457 RIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKA---------------S 501
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
E A R S+ P T +L +CA L+ L G++ H + +K+ L +D+
Sbjct: 502 ERA-------SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL------ATDV 548
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
VG++L+DMY KCG ++ ++F+ + R+ ++WN +++ +G +A+ + + M++
Sbjct: 549 AVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQ 608
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G KP+ VT I V ACSH+G+V EG K F +M K++G+ P DHY C+VDLLGRAG + E
Sbjct: 609 GVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKE 668
Query: 547 AKTLIEAMPMQPD-AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
A LI +P D A W SLL AC++H N+ +GE A+ L+++EP+ + YVLL+N+Y+
Sbjct: 669 AYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 728
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
G W + VR+ M+ +GV K+PGCSWIE V+ F+ D HP ++++ L+ L
Sbjct: 729 SAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWE 788
Query: 666 EMKRVGYVPNAS 677
M++ GY+P+ S
Sbjct: 789 RMRKEGYIPDTS 800
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/574 (26%), Positives = 267/574 (46%), Gaps = 87/574 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ F LL + + + +++HA + K + + + + N L+++Y KCG KV
Sbjct: 92 DNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 151
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++S ER+Q SWNS++S +++ AL
Sbjct: 152 FDRIS-------------------------------ERNQVSWNSLISSLCSFEKWEMAL 180
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSAL 192
F M E+ S ++ S AC+ MG QVHA L K +S ++ + L
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNS--FIINTL 238
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MYGK G+++ ++ + R++V+WN++++ QN +ALE M+ G+EPD
Sbjct: 239 VAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T++SV+ AC+ L + G ++HA ++ L + +G+ALVDMY C ++ VFD
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD 358
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R + +M++GYA+ + A L+F +M EE+ GL
Sbjct: 359 GMFDRKIGLWNAMITGYAQNEYDEEALLLFIEM---------------------EESAGL 397
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
T ++ AC H VVK GL + D FV N+L
Sbjct: 398 L---------ANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGL------DRDRFVQNAL 442
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE---- 488
+DMY + G ++ RIF M +RD V+WN +I G + +AL + KM +
Sbjct: 443 MDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASE 502
Query: 489 -------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KP+ +T++ +L +C+ + +G++ + + ++ LA + +VD+ +
Sbjct: 503 RASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 561
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
GCL ++ + + +P++ + + W ++ A +H N
Sbjct: 562 GCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN 594
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 138/297 (46%), Gaps = 41/297 (13%)
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
W L+ ++ +A+ ++ M+ GI+PD +++ A A L G QIHA +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ + + + N LV++Y KCG VFDR +SE
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR------ISE----------------- 157
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
RN VSWN+LI+ + E AL FR + E V P+ +T ++ AC+N
Sbjct: 158 --------RNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFP 209
Query: 400 ---DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
L +G+Q H + ++ G E + F+ N+L+ MY K G + + + RD
Sbjct: 210 MPEGLLMGKQVHAYGLRKG-------ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRD 262
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
V+WN ++ QN EAL ++M+L G +PD T+ VL ACSH ++ G++
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKE 319
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 13/214 (6%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P ++ F LL A A+L D+ LG+Q H HV K G G +S + V N+L+++Y KCG
Sbjct: 91 PDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGY----GVDS-VTVANTLVNLYRKCGDF 145
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
++F+ + ER+ VSWN++I AL F+ ML +P T++ V AC
Sbjct: 146 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALAC 205
Query: 503 SHAGLVEE---GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
S+ + E G++ + ++ L +V + G+ G L +K L+ + + D
Sbjct: 206 SNFPMPEGLLMGKQVHAYGLRKGELNSFI--INTLVAMYGKMGKLASSKVLLGSFEGR-D 262
Query: 560 AVIWGSLLAA-CKVHRNIMLGEYVAKKLLE-IEP 591
V W ++L++ C+ + + EY+ + +LE +EP
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 40/213 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +L SC +++ + +HA IK+ A+++ + + L+D+YAKCGCL +RKVF
Sbjct: 512 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 571
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +NV TWN I V + H +A+
Sbjct: 572 DQIPIRNVITWNVI-------------------------------VMAYGMHGNSQDAID 600
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSALID 194
M + +E +F S +AC+ S G ++ + K SSD Y + ++D
Sbjct: 601 MLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHY--ACVVD 658
Query: 195 MYGKCGRVSCARRVFDGMRERNIV---SWNSLI 224
+ G+ GRV A ++ + + RN +W+SL+
Sbjct: 659 LLGRAGRVKEAYQLIN-LIPRNFDKAGAWSSLL 690
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 332/625 (53%), Gaps = 75/625 (12%)
Query: 58 NRLIDVYAKC---GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
N L+ Y++ L AR++FD+M ++ TWN+++ ++ G + +A +LF MP+R
Sbjct: 96 NTLLAAYSRSLNSEHLAAARRLFDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQR 155
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
+ SWN+MV+GF + ++AL F M ++ A S G+ +S G + +
Sbjct: 156 NVASWNTMVTGFFSAGQVNKALDMFDAMPVKDSA----SLGTLVS---GFIKNGRLHEAE 208
Query: 175 ALLSKSRYSSD----VYMGSALIDMYGKCGRVSCARRVFD------------GMR--ERN 216
LL+K +D V + LI YG+ GRVS ARR+FD MR RN
Sbjct: 209 ELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRLFDMIPRGQYQCKTNNMRVFARN 268
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSWNS++TCY + G A E+F M PD+
Sbjct: 269 VVSWNSMMTCYIRTGDVCSAREIFNEM------PDK------------------------ 298
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
DLV N ++ Y K + EA +F MP ++VS ++ G+ + V+
Sbjct: 299 ----------DLVSWNTMIAGYTKVSDMEEAEKLFWEMPDPDIVSWNLIIRGFTQKGDVE 348
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
AR F +M ER +SWN +I+GY QNG + A+ LF + P +TF ++L ACA
Sbjct: 349 HARGFFDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACA 408
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+L L+LG Q H + K L D N+L+ MY + G++ D IF+ M ++D
Sbjct: 409 SLPMLRLGAQLHQLIEKSFL-------PDTATSNALMTMYSRGGALTDAEAIFKQMPQKD 461
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSWNA+I G +G TEAL LF+ M P H+T I +L AC +AGLV EG F
Sbjct: 462 LVSWNALIGGYEHHGCATEALQLFEDMRSARVMPTHITFISLLSACGNAGLVSEGWMVFD 521
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
+M E+ +A +HY +V+L+GR G LD+A +I +MP+ PD +WG+ L AC +N
Sbjct: 522 TMIHEYSIAARIEHYAALVNLIGRHGQLDDALEVINSMPIAPDRSVWGAFLGACTAKKNE 581
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
+L AK L +I+P +S PYVL+ N++A GRWG VR+ M ++G+ K PG SWI++
Sbjct: 582 LLAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDL 641
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLK 661
V+VF+ D HPL +EI+ VLK
Sbjct: 642 HDKVHVFISGDTSHPLTQEIFSVLK 666
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 46/245 (18%)
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FD +P R+VV+ S ++ A+ V +AR F M R+ VSWN L+A Y+++ +E
Sbjct: 53 FDALPARSVVTWNSFLAALARGRDVAAARAFFASMPVRDAVSWNTLLAAYSRSLNSEHLA 112
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
RL F + D N
Sbjct: 113 AARRL------------------------------------------FDEMPQRDAVTWN 130
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y++ G + + ++F+ M +R+ SWN M+ G G +AL +F M +
Sbjct: 131 TLLGAYVRRGLMVEAEKLFDEMPQRNVASWNTMVTGFFSAGQVNKALDMFDAMPV----K 186
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
D ++ ++ G + E + + + + D Y ++ G+ G + +A+ L
Sbjct: 187 DSASLGTLVSGFIKNGRLHEAEELLTKRLRVTDMDEAVDAYNTLIAAYGQVGRVSDARRL 246
Query: 551 IEAMP 555
+ +P
Sbjct: 247 FDMIP 251
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/576 (36%), Positives = 317/576 (55%), Gaps = 62/576 (10%)
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
S F H R+ AL + M + + + S L AC+ +MG ++H K+
Sbjct: 84 SPFESHPRY--ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLV 141
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY-------EQNGPAS-- 234
SDV++ +AL+ MY +CG + AR +FD M ER++VSW+++I Y Q S
Sbjct: 142 SDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWT 201
Query: 235 -------------DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+ +FVRM+ + P+++T+ S++ +C + A + G ++HA ++R
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILR- 260
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
L L ALVDMY KCG+ ++SAR +
Sbjct: 261 NGFGMSLALATALVDMYGKCGE-------------------------------IRSARAI 289
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F M ++V++W A+I+ Y Q + A LF ++ V P T +LL+ CA L
Sbjct: 290 FDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGAL 349
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+G+ H ++ K G+ E D+ + +LIDMY KCG + R+F ++RD +WN
Sbjct: 350 DMGKWFHAYIDKQGV------EVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWN 403
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
M+ G +GYG +AL LF +M G KP+ +T IG L ACSHAGLV EG+ F M +
Sbjct: 404 VMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHD 463
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
GL P +HY CMVDLLGRAG LDEA +IE+MP+ P+ IWG++LAACK+H+N +GE
Sbjct: 464 FGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGEL 523
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
A++LL +EP N G VL+SN+YA RW +V +RK ++ G+ K+PG S IE+ G V+
Sbjct: 524 AARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVH 583
Query: 642 VFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
F + D HPL ++I +L +++++K GY+P+ S
Sbjct: 584 DFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTS 619
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 227/452 (50%), Gaps = 47/452 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS +L +C + + +H +K+ S++F+ N L+ +Y++CG L AR +
Sbjct: 107 VDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLL 166
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKMS ++V +W+++I + LF +R SW +M++G+ + + E
Sbjct: 167 FDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYIRCNDLEEGE 217
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M EN ++ + S + +C ++G ++HA + ++ + + + +AL+DMY
Sbjct: 218 RLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMY 277
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + AR +FD M+ +++++W ++I+ Y Q A ++FV+M +G+ P+E+T+
Sbjct: 278 GKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMV 337
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++S CA A G HA + + + + D++L AL+DMYAKCG ++ A+ +F
Sbjct: 338 SLLSLCAVNGALDMGKWFHAYIDK-QGVEVDVILKTALIDMYAKCGDISGAQRLFSEAID 396
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++ + M++GY +G E+AL LF +
Sbjct: 397 RDICTWNVMMAGYG-------------------------------MHGYGEKALKLFTEM 425
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P TF L+AC++ + G+ ++ H + E ++D+
Sbjct: 426 ETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMI-HDFGLVPKVEH----YGCMVDLL 480
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ G +++ ++ E+M V + W AM+ C
Sbjct: 481 GRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 31/313 (9%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
+R +++ + F + L+ SC +V +R+HA I+++ F + + L+D+
Sbjct: 217 ERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDM 276
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y KCG + AR +FD M N +D +W +M+
Sbjct: 277 YGKCGEIRSARAIFDSMKN-------------------------------KDVMTWTAMI 305
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
S +AQ + A FV+M +E + S LS CA + MG HA + K
Sbjct: 306 SAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVE 365
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
DV + +ALIDMY KCG +S A+R+F +R+I +WN ++ Y +G AL++F M
Sbjct: 366 VDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEM 425
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
G++P+++T + AC+ EG + +++ L + +VD+ + G
Sbjct: 426 ETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGL 485
Query: 304 LNEARCVFDRMPI 316
L+EA + + MP+
Sbjct: 486 LDEAYKMIESMPV 498
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/560 (38%), Positives = 321/560 (57%), Gaps = 52/560 (9%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N I+ K+G I+ A +LF MP+R WN M+SG+ + EA F
Sbjct: 59 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLF-- 116
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MG Q S +V + +I + K G
Sbjct: 117 -------------------------HVMGDQ--------EISRNVITWTTMITGHAKKGN 143
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVS 260
+ AR FD M ER++VSWN++++ Y Q G + + +F M++ G ++PDE T A+V+S
Sbjct: 144 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 203
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI---R 317
+C+SL I +L R + + AL+DM+AKCG L A +F+++ + R
Sbjct: 204 SCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR 263
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR--L 375
+ V +M+S YA+ + SA+ +F KM +R+ VSWN++IAGYTQNGE+ +A+ LF +
Sbjct: 264 SSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMI 323
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+S P T ++ +AC +L +L LG A + + + ++ I V NSLI+M
Sbjct: 324 SSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI------SISVYNSLINM 377
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y +CGS++D IF+ M RD VS+N +I G A++G+G E++ L KM G +PD +T
Sbjct: 378 YSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITY 437
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I +L ACSHAGL++EG++ F S+ P DHY CM+D+LGRAG L+EA LI++MP
Sbjct: 438 IAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 492
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
M+P A I+GSLL A +H+ + LGE A KL ++EP NSG Y LLSN+YA GRW E +
Sbjct: 493 MEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDK 552
Query: 616 VRKLMRKRGVVKQPGCSWIE 635
VR MRK+GV K G SW+E
Sbjct: 553 VRDTMRKQGVKKTTGLSWLE 572
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 226/512 (44%), Gaps = 116/512 (22%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L D P A ++S S++ A ++KS + + +++N ++ +YAK G + A
Sbjct: 23 LQHCDIKPNASFYSVMMKSAG-SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFA 81
Query: 74 RKVFDKMSN-----------------------------------KNVFTWNSIITGLLKW 98
RK+FD+M + +NV TW ++ITG K
Sbjct: 82 RKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKK 141
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE-NFALSEYSFGSA 157
G + A F MPER SWN+M+SG+AQ E + F M S N E ++ +
Sbjct: 142 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATV 201
Query: 158 LSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV-------- 208
+S+C+ D + V L K + + ++ +AL+DM+ KCG + A ++
Sbjct: 202 ISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 261
Query: 209 --------------------------FDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
FD M +R+ VSWNS+I Y QNG + A+++F
Sbjct: 262 YRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEE 321
Query: 243 MMAS--GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M++S +PDEVT+ SV SAC L G +++ ++ + + N+L++MY++
Sbjct: 322 MISSEDSRKPDEVTMVSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMYSR 380
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG + +A +F M R++VS +++SG+A
Sbjct: 381 CGSMQDAVLIFQEMATRDLVSYNTLISGFA------------------------------ 410
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
++G E++ L +K + + P T+ +L AC++ L G++ F S
Sbjct: 411 -EHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRL----------FES 459
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ D+ +IDM + G +E+ ++ ++M
Sbjct: 460 IKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 491
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 159/300 (53%), Gaps = 16/300 (5%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM-- 80
+ L D CL S S R++ ++ F F++ L+D++AKCG L A K+F+++
Sbjct: 206 SSLGDPCL---SESIVRKLDDKV---GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
Query: 81 -SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
++ WN++I+ + G + A LF MP+RD SWNSM++G+ Q+ +A+ F
Sbjct: 260 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 319
Query: 140 VKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M S ++ E + S SAC + +G ++L + + + ++LI+MY
Sbjct: 320 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYS 379
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A +F M R++VS+N+LI+ + ++G +++E+ +M GIEPD +T +
Sbjct: 380 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIA 439
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++AC+ EG RL K D+ ++DM + G+L EA + MP+
Sbjct: 440 ILTACSHAGLLDEG----QRLFESIKFP-DVDHYACMIDMLGRAGRLEEAMKLIQSMPME 494
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 22/233 (9%)
Query: 360 YTQNGENEEA-LGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
Y+Q G + + + LF+ +L+ + P + ++ + + + L L HV+K
Sbjct: 5 YSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLA-----HVLK---- 55
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
SG + D +V N ++ +Y K G +E ++F+ M +R WN MI G + G EA
Sbjct: 56 --SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAS 113
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF M + +T ++ + G ++ R YF M + ++ + M+
Sbjct: 114 TLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVS-----WNAMLSG 168
Query: 538 LGRAGCLDEAKTLIEAM----PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+ G +E L M +QPD W +++++C + L E + +KL
Sbjct: 169 YAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKL 221
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG-------------- 99
I + N LI++Y++CG + A +F +M+ +++ ++N++I+G + G
Sbjct: 368 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 427
Query: 100 ---------------------FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+D+ RLF S+ D + M+ + R EA+
Sbjct: 428 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 487
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYG 197
M E A +GS L+A + ++G A L K ++S Y + L ++Y
Sbjct: 488 IQSMPMEPHA---GIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY--ALLSNIYA 542
Query: 198 KCGRVSCARRVFDGMRERNI 217
GR +V D MR++ +
Sbjct: 543 SAGRWKEGDKVRDTMRKQGV 562
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/657 (35%), Positives = 345/657 (52%), Gaps = 82/657 (12%)
Query: 32 SKSVSDTRRVHARI-IKSQFASE-------IFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+K+++ + +H ++ I++Q ++ I N LI++Y KC L AR +FD+MS +
Sbjct: 25 TKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLR 84
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V ++N ++ G L G + +LF +MVS Q +
Sbjct: 85 SVVSYNVLMGGYLHSGEHLEVVKLF-----------KNMVSSLYQPN------------- 120
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
EY F + LSACA S G Q H L K ++ S+L+ MY KC V
Sbjct: 121 -------EYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 204 CARRVFDGMR-----ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
A +V + + + +NS++ ++G +A+EV RM+ G+ D VT SV
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ C + GLQ+HA+L++ L D+ +G+ LVDM+ KCG + AR VFD + RN
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLK-GGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V V W +L+ Y QNGE EE L L + R
Sbjct: 293 V-------------------------------VVWTSLMTAYLQNGEFEETLNLLSCMDR 321
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E +TF LLNA A +A L+ G H V K G++ + + VGN+LI+MY K
Sbjct: 322 EGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIK------NRVIVGNALINMYSK 375
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG ++ +F M RD ++WNAMI G +Q+G G +AL LF+ ML GE P+HVT +GV
Sbjct: 376 CGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGV 435
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+H LV EG Y + + K + P +HYTC+V +L RAG L+EA+ + ++
Sbjct: 436 LSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKW 495
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D V W LL AC +HRN LG +A+ +L+++P + G Y LLSNMYA+ W V +RK
Sbjct: 496 DVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRK 555
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+MR+R V K+PG SWIEI V+VF HP +IY +++L +K++GYVPN
Sbjct: 556 MMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPN 612
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 170/376 (45%), Gaps = 71/376 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++ C + + + +VHA+++K ++F+ + L+D++ KCG + ARKVF
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVF 285
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + N+NV W S++T L Q+ F E L
Sbjct: 286 DGLQNRNVVVWTSLMTAYL-------------------------------QNGEFEETLN 314
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
M E +E++F L+A AG + G +HA + K + V +G+ALI+MY
Sbjct: 315 LLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYS 374
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + VF MR R+I++WN++I Y Q+G AL +F M+++G P+ VT
Sbjct: 375 KCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVG 434
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR--------- 308
V+SACA LA EG +LM+ K+ L +V + + G L EA
Sbjct: 435 VLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVK 494
Query: 309 ------------CVFDR--------------MPIRNVVSETSMVSGYAKASSVKSARLMF 342
C R M R++ + T + + YAKA S S ++
Sbjct: 495 WDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIR 554
Query: 343 TKMLERNV-----VSW 353
M ERNV VSW
Sbjct: 555 KMMRERNVKKEPGVSW 570
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 119/275 (43%), Gaps = 47/275 (17%)
Query: 396 ANLADLQLGRQAHTHVV--KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AN +L G+ HT ++ S E +I NSLI++Y+KC + +F+ M
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
R VS+N ++ G +G E + LFK M+ +P+ VL AC+H+G V EG +
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 514 --------------------------------YFSSMSKEHGLAPLKDH---YTCMVDLL 538
+ EHG + Y +++ L
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202
Query: 539 GRAGCLDEAKTLIEAMPMQP---DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
+G L EA ++ M + D+V + S++ C R++ LG V +LL+ +
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFD- 261
Query: 596 PYVLLSNMYAEL-GRWGEVVRVRKL---MRKRGVV 626
V + +M ++ G+ G+V+ RK+ ++ R VV
Sbjct: 262 --VFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVV 294
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/687 (32%), Positives = 356/687 (51%), Gaps = 80/687 (11%)
Query: 12 GDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL 70
GD AF+ D + +L C R + + + VH +K + E+ + N L+D+Y+KCGC+
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A+ +F +NKNV SWN+MV GF+
Sbjct: 344 TNAQMIFKMNNNKNV-------------------------------VSWNTMVGGFSAEG 372
Query: 131 RFSEALGYFVKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+M + E+ E + +A+ C ++H K + + +
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+A + Y KCG +S A+RVF G+R + + SWN+LI + Q+ +L+ ++M SG+
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T+ S++SAC+ L + + G ++H ++R L DL + +++ +Y CG+L +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQ 551
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD M ++++VSWN +I GY QNG +
Sbjct: 552 ALFDAME-------------------------------DKSLVSWNTVITGYLQNGFPDR 580
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
ALG+FR + + + + AC+ L L+LGR+AH + +KH L E D F+
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL------EDDAFI 634
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
SLIDMY K GS+ ++F + E+ SWNAMI+G +G EA+ LF++M G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA- 547
PD +T +GVL AC+H+GL+ EG +Y M GL P HY C++D+LGRAG LD+A
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ + E M + D IW SLL++C++H+N+ +GE VA KL E+EP YVLLSN+YA L
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W +V +VR+ M + + K GCSWIE+ V F+V ++ +EI + +L ++
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Query: 668 KRVGYVPNA-------SDDEAYEEQNG 687
++GY P+ S++E E+ G
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKIEQLRG 901
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 165/653 (25%), Positives = 291/653 (44%), Gaps = 124/653 (18%)
Query: 5 RSVKQIVGD------LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQ 57
R+V++ VGD L LL + + K + R++H + S + ++ +
Sbjct: 64 RTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 123
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
R+I +YA CG +R VFD + +KN+F
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLF------------------------------- 152
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHAL 176
WN+++S +++++ + E L F++M S L + +++ + ACAG D +G VH L
Sbjct: 153 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ K+ DV++G+AL+ YG G V+ A ++FD M ERN+VSWNS+I + NG + ++
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 237 LEVFVRMMAS----GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ MM PD TL +V+ CA G +H ++ +L +LVL N
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNN 331
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE----- 347
AL+DMY+KCG + A+ +F +NVVS +MV G++ + +ML
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 348 ------------------------------------RNVVSWNALIAGYTQNGENEEALG 371
N + NA +A Y + G A
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 372 LFRLLKRESV-------------------------------CPTHYTFGNLLNACANLAD 400
+F ++ ++V P +T +LL+AC+ L
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+LG++ H ++++ L E D+FV S++ +Y+ CG + +F+ M ++ VSW
Sbjct: 512 LRLGKEVHGFIIRNWL------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N +I G QNG+ ALG+F++M+L G + ++M+ V ACS + GR+ + K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H L ++D+ + G + ++ + + + A W +++ +H
Sbjct: 626 -HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 676
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 330/618 (53%), Gaps = 69/618 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+K L +C + + + +++H +I+K + + L+D+YAKCG
Sbjct: 153 DDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG-LLDMYAKCG--------- 202
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I + ++F + R+ W SM++G+ ++D + E L
Sbjct: 203 ----------------------EIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLV 240
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + +EY++G+ + AC G H L KS + ++L+DMY
Sbjct: 241 LFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYV 300
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S ARRVF+ ++V W ++I Y NG ++AL +F +M GI+P+ VT+AS
Sbjct: 301 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIAS 360
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C + + G IH ++ D + NALV MYAKC + +A+ V
Sbjct: 361 VLSGCGLVGNLELGRSIHGLSIKVGIW--DTNVANALVHMYAKCYQNRDAKYV------- 411
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
F E+++V+WN++I+G++QNG EAL LF +
Sbjct: 412 ------------------------FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 447
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
ESV P T +L +ACA+L L +G H + VK G FL+ S + VG +L+D Y
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLG--FLA--SSSVHVGTALLDFYA 503
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG E IF+T+ E++ ++W+AMI G + G +L LF++ML +KP+ T
Sbjct: 504 KCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTS 563
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH G+V EG+KYFSSM K++ P HYTCMVD+L RAG L++A +IE MP+Q
Sbjct: 564 VLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 623
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD +G+ L C +H LGE V KK+L++ P ++ YVL+SN+YA GRW + VR
Sbjct: 624 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVR 683
Query: 618 KLMRKRGVVKQPGCSWIE 635
LM++RG+ K G S +E
Sbjct: 684 NLMKQRGLSKIAGHSIME 701
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 190/398 (47%), Gaps = 42/398 (10%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q H +L+ + D+ + + L+ +YG G AR VFD + E + W ++ CY N
Sbjct: 74 QAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNN 133
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ + ++ + +M G D++ + + AC + G +IH ++++ N ++ G
Sbjct: 134 ESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTG 193
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
L+DMYAKCG++ + VF+ + +RNVV TSM++GY K
Sbjct: 194 --LLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVK-------------------- 231
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
N EE L LF ++ SV YT+G L+ AC L L G+ H +
Sbjct: 232 -----------NDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCL 280
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K G+ E S V SL+DMY+KCG + + R+F D V W AMIVG NG
Sbjct: 281 IKSGI-----ELSSCLV-TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 334
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
EAL LF+KM G KP+ VT+ VL C G +E GR +S + G+ +
Sbjct: 335 SVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRS-IHGLSIKVGIWD-TNVA 392
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+V + + +AK + E M + D V W S+++
Sbjct: 393 NALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISG 429
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/687 (32%), Positives = 356/687 (51%), Gaps = 80/687 (11%)
Query: 12 GDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL 70
GD AF+ D + +L C R + + + VH +K + E+ + N L+D+Y+KCGC+
Sbjct: 34 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 93
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A+ +F +NKNV SWN+MV GF+
Sbjct: 94 TNAQMIFKMNNNKNV-------------------------------VSWNTMVGGFSAEG 122
Query: 131 RFSEALGYFVKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+M + E+ E + +A+ C ++H K + + +
Sbjct: 123 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 182
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+A + Y KCG +S A+RVF G+R + + SWN+LI + Q+ +L+ ++M SG+
Sbjct: 183 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 242
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T+ S++SAC+ L + + G ++H ++R L DL + +++ +Y CG+L +
Sbjct: 243 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQ 301
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD M ++++VSWN +I GY QNG +
Sbjct: 302 ALFDAME-------------------------------DKSLVSWNTVITGYLQNGFPDR 330
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
ALG+FR + + + + AC+ L L+LGR+AH + +KH L E D F+
Sbjct: 331 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL------EDDAFI 384
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
SLIDMY K GS+ ++F + E+ SWNAMI+G +G EA+ LF++M G
Sbjct: 385 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 444
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA- 547
PD +T +GVL AC+H+GL+ EG +Y M GL P HY C++D+LGRAG LD+A
Sbjct: 445 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 504
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ + E M + D IW SLL++C++H+N+ +GE VA KL E+EP YVLLSN+YA L
Sbjct: 505 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 564
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W +V +VR+ M + + K GCSWIE+ V F+V ++ +EI + +L ++
Sbjct: 565 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 624
Query: 668 KRVGYVPNA-------SDDEAYEEQNG 687
++GY P+ S++E E+ G
Sbjct: 625 SKMGYRPDTMSVQHDLSEEEKIEQLRG 651
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRE----SVCPTHYTFGNLLNACANLADLQL 403
RN VSWN++I ++ NG +EE+ L + E + P T +L CA ++ L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
G+ H VK LR + ++ + N+L+DMY KCG + + IF+ ++ VSWN M
Sbjct: 61 GKGVHGWAVK--LRL----DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 114
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGE--KPDHVTMIGVLCACSHAGLV 508
+ G + G + ++ML GE K D VT++ + C H +
Sbjct: 115 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 161
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/579 (37%), Positives = 327/579 (56%), Gaps = 61/579 (10%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A R+F +P+ ++ +NS++ G++ D +A+ F +M + +E++ L
Sbjct: 162 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 221
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC + VH L K S V++ +ALI +Y CG + CAR++FD + ++ +V
Sbjct: 222 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 281
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SWNS+I E+T G++I
Sbjct: 282 SWNSMI---------------------------EIT----------------GVKI---- 294
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
D+++ NAL DMYAKCG L+ A+ +FDR +NVVS TSM+S YA+ S++ A
Sbjct: 295 --------DIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVA 346
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
R +F +M +NVVSWN++I+ Y + G+ EAL LF ++ V P T ++L AC+ L
Sbjct: 347 RQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQL 406
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
DL +G++ H +++ + + + + NSLIDMY KCG V IF M ++ V
Sbjct: 407 GDLVMGKKIHNYILSNKGAY------GVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLV 460
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWN +I A +G G EA+ LF++M G PD +T+ G+L ACSH+GLV+ G YF M
Sbjct: 461 SWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRM 520
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ + +HY CMVDLLGR G L EA LI MPM+PD V+WG+LL AC++H N+ +
Sbjct: 521 GVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEI 580
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ + K+LLE+EP + G YVL+SN+Y E RW +V ++RKLM RG+ K S IEI G
Sbjct: 581 GKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDG 640
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ FMV DKRH ++ IY +L LT ++ GY+ N S
Sbjct: 641 CIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAGYLCNIS 679
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 165/296 (55%), Gaps = 1/296 (0%)
Query: 53 EIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP 112
+I ++N L D+YAKCG L+ A+ +FD+ KNV +W S+I+ + G I+ A ++F MP
Sbjct: 295 DIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMP 354
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
++ SWNSM+S + + ++ EAL F KM + E + S L+AC+ D MG +
Sbjct: 355 GKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKK 414
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+H + ++ + V + ++LIDMY KCG V A +F M +N+VSWN +I +G
Sbjct: 415 IHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGC 474
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+A+++F M A G PDE+TL ++SAC+ GL R+ ++ ++
Sbjct: 475 GLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYA 534
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+VD+ + G L EA + RMP++ +VV +++ +V+ + + ++LE
Sbjct: 535 CMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLE 590
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 141/355 (39%), Gaps = 86/355 (24%)
Query: 300 KCGKLNEARCVFDRMPIRNVVSET----SMVSGYA--KASSVKSARLMFTKMLERNVVSW 353
KC + + + ++ + + +ET ++S A A ++ A+ MF ++ + N +
Sbjct: 123 KCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMY 182
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
N+LI GY+ + + +A+ LFR + + P +T +L AC + H +K
Sbjct: 183 NSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIK 242
Query: 414 HGLRFL-----------------------------------------SGEESDIFVGNSL 432
G+ L +G + DI V N+L
Sbjct: 243 LGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVRNAL 302
Query: 433 IDMYMKC-------------------------------GSVEDGCRIFETMVERDWVSWN 461
DMY KC GS+E +IF+ M ++ VSWN
Sbjct: 303 XDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWN 362
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK---YFSSM 518
+MI + G EAL LF KM PD T++ +L ACS G + G+K Y S
Sbjct: 363 SMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSN 422
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+G+ Y ++D+ + G + A + MP + + V W ++ A +H
Sbjct: 423 KGAYGVTL----YNSLIDMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIGALALH 472
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/614 (34%), Positives = 329/614 (53%), Gaps = 67/614 (10%)
Query: 63 VYAKCGCLYGARKVF-DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
+Y+KC + A +F D NVF +N+II+G + GF PE
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGF-----------PE-------- 41
Query: 122 MVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
E ++ KM +E +++F A+ AC ++ K ++H LL K
Sbjct: 42 ------------EGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIHGLLFKFG 86
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
DV++GSAL++ Y K G + A+ F+ + R++V WN+++ Y Q G LE F
Sbjct: 87 LELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFR 146
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
RM + P T+ ++S A + G IH M+ + + + N+L+DMY KC
Sbjct: 147 RMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKM-GYDSGVAVSNSLIDMYGKC 205
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
+C+ D + I F M E+++ SWN++ + +
Sbjct: 206 ------KCIEDALEI-------------------------FEMMREKDIFSWNSIXSVHE 234
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
Q G+++ L L + + P T +L AC++LA L GR+ H +++ GL
Sbjct: 235 QCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGK 294
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+ D+ + N++IDMY KCGS+ D +FE M +D SWN MI+G +GYG EAL +F
Sbjct: 295 DIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFS 354
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+M KPD VT +GVL ACSHAG V +GR + + M ++ +AP +HYTC++D+LGRA
Sbjct: 355 RMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRA 414
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G LDEA L MP++ + V+W +LLAAC++H++ +L E A+++ E+EP + G YVL+S
Sbjct: 415 GQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+Y +GR+ EV+ VR MR++ V K PGCSWIE+ V+VF+ D+ HP IY L
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLN 534
Query: 662 MLTREMKRVGYVPN 675
LT + GYVP+
Sbjct: 535 SLTARLCEHGYVPD 548
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 37/289 (12%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+++ R +H +K + S + + N LID+Y KC C+ A ++F+ M K++F+WNSI +
Sbjct: 173 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSV 232
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+ G D RL + M+ Q D +
Sbjct: 233 HEQCGDHDGTLRLL-----------DRMLGAGIQPDLVTVT------------------- 262
Query: 155 GSALSACAGSVDFKMGTQVHALLSKS------RYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ L AC+ G ++H + S + DV + +A+IDMY KCG + A V
Sbjct: 263 -TVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 321
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M +++ SWN +I Y +G ++ALE+F RM ++PDEVT V+SAC+
Sbjct: 322 FERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 381
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+G A++ + + ++DM + G+L+EA + MPI
Sbjct: 382 SQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 430
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA------SEIF 55
T R + +++G D +L +C ++ R +H +I S ++
Sbjct: 241 GTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVL 300
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
++N +ID+YAKCG + A VF++M NK+V +WN +I G
Sbjct: 301 LKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMG--------------------- 339
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+ H +EAL F +M E +F LSAC+ + G A
Sbjct: 340 ----------YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA 389
Query: 176 LLSKSRY--SSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+ KS+Y + + + +IDM G+ G++ A + M E N V W +L+
Sbjct: 390 QM-KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 441
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 322/560 (57%), Gaps = 52/560 (9%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ + N I+ K+G I+ A +LF MP+R WN M+SG+ + EA F
Sbjct: 116 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLF-- 173
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MG Q S +V + +I + K G
Sbjct: 174 -------------------------HVMGDQ--------EISRNVITWTTMITGHAKKGN 200
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVS 260
+ AR FD M ER++VSWN++++ Y Q G + + +F M++ G ++PDE T A+V+S
Sbjct: 201 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 260
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI---R 317
+C+SL I +L R + + AL+DM+AKCG L A +F+++ + R
Sbjct: 261 SCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYR 320
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR--L 375
+ V +M+S YA+ + SA+ +F KM +R+ VSWN++IAGYTQNGE+ +A+ LF +
Sbjct: 321 SSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMI 380
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+S P T ++ +AC +L +L LG A ++K ++ + I V NSLI+M
Sbjct: 381 SSEDSRKPDEVTMVSVFSACGHLGELGLGNWA-VSILK-----VNHIQISISVYNSLINM 434
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y +CGS++D IF+ M RD VS+N +I G A++G+G E++ L KM G +PD +T
Sbjct: 435 YSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITY 494
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I +L ACSHAGL++EG++ F S+ P DHY CM+D+LGRAG L+EA LI++MP
Sbjct: 495 IAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 549
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
M+P A I+GSLL A +H+ + LGE A KL ++EP NSG Y LLSN+YA GRW E +
Sbjct: 550 MEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDK 609
Query: 616 VRKLMRKRGVVKQPGCSWIE 635
VR MRK+GV K G SW+E
Sbjct: 610 VRDTMRKQGVKKTTGLSWLE 629
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 226/512 (44%), Gaps = 116/512 (22%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L D P A ++S S++ A ++KS + + +++N ++ +YAK G + A
Sbjct: 80 LQHCDIKPNASFYSVMMKSAG-SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFA 138
Query: 74 RKVFDKMSN-----------------------------------KNVFTWNSIITGLLKW 98
RK+FD+M + +NV TW ++ITG K
Sbjct: 139 RKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKK 198
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE-NFALSEYSFGSA 157
G + A F MPER SWN+M+SG+AQ E + F M S N E ++ +
Sbjct: 199 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATV 258
Query: 158 LSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV-------- 208
+S+C+ D + V L K + + ++ +AL+DM+ KCG + A ++
Sbjct: 259 ISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 318
Query: 209 --------------------------FDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
FD M +R+ VSWNS+I Y QNG + A+++F
Sbjct: 319 YRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEE 378
Query: 243 MMAS--GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M++S +PDEVT+ SV SAC L G +++ ++ + + N+L++MY++
Sbjct: 379 MISSEDSRKPDEVTMVSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMYSR 437
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG + +A +F M R++VS +++SG+A
Sbjct: 438 CGSMQDAVLIFQEMATRDLVSYNTLISGFA------------------------------ 467
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
++G E++ L +K + + P T+ +L AC++ L G++ F S
Sbjct: 468 -EHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRL----------FES 516
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ D+ +IDM + G +E+ ++ ++M
Sbjct: 517 IKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 548
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 159/300 (53%), Gaps = 16/300 (5%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM-- 80
+ L D CL S S R++ ++ F F++ L+D++AKCG L A K+F+++
Sbjct: 263 SSLGDPCL---SESIVRKLDDKV---GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 316
Query: 81 -SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
++ WN++I+ + G + A LF MP+RD SWNSM++G+ Q+ +A+ F
Sbjct: 317 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 376
Query: 140 VKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M S ++ E + S SAC + +G ++L + + + ++LI+MY
Sbjct: 377 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYS 436
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A +F M R++VS+N+LI+ + ++G +++E+ +M GIEPD +T +
Sbjct: 437 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIA 496
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+++AC+ EG RL K D+ ++DM + G+L EA + MP+
Sbjct: 497 ILTACSHAGLLDEG----QRLFESIKFP-DVDHYACMIDMLGRAGRLEEAMKLIQSMPME 551
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 22/252 (8%)
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEA-LGLFR-LLKRESVCPTHYTFGNLLNACANL 398
+F +V + ++ Y+Q G + + + LF+ +L+ + P + ++ + +
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
+ L L HV+K SG + D +V N ++ +Y K G +E ++F+ M +R
Sbjct: 103 SMLFLA-----HVLK------SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVA 151
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
WN MI G + G EA LF M + +T ++ + G ++ R YF M
Sbjct: 152 DWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKM 211
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM----PMQPDAVIWGSLLAACKVHR 574
+ ++ + M+ + G +E L M +QPD W +++++C
Sbjct: 212 PERSVVS-----WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG 266
Query: 575 NIMLGEYVAKKL 586
+ L E + +KL
Sbjct: 267 DPCLSESIVRKL 278
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 41/200 (20%)
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG-------------- 99
I + N LI++Y++CG + A +F +M+ +++ ++N++I+G + G
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 484
Query: 100 ---------------------FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+D+ RLF S+ D + M+ + R EA+
Sbjct: 485 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 544
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSDVYMGSALIDMYG 197
M E A +GS L+A + ++G A L K ++S Y + L ++Y
Sbjct: 545 IQSMPMEPHA---GIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY--ALLSNIYA 599
Query: 198 KCGRVSCARRVFDGMRERNI 217
GR +V D MR++ +
Sbjct: 600 SAGRWKEGDKVRDTMRKQGV 619
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/687 (32%), Positives = 356/687 (51%), Gaps = 80/687 (11%)
Query: 12 GDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL 70
GD AF+ D + +L C R + + + VH +K + E+ + N L+D+Y+KCGC+
Sbjct: 639 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 698
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A+ +F +NKNV SWN+MV GF+
Sbjct: 699 TNAQMIFKMNNNKNV-------------------------------VSWNTMVGGFSAEG 727
Query: 131 RFSEALGYFVKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+M + E+ E + +A+ C ++H K + + +
Sbjct: 728 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 787
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+A + Y KCG +S A+RVF G+R + + SWN+LI + Q+ +L+ ++M SG+
Sbjct: 788 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 847
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T+ S++SAC+ L + + G ++H ++R L DL + +++ +Y CG+L +
Sbjct: 848 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQ 906
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD M ++++VSWN +I GY QNG +
Sbjct: 907 ALFDAME-------------------------------DKSLVSWNTVITGYLQNGFPDR 935
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
ALG+FR + + + + AC+ L L+LGR+AH + +KH L E D F+
Sbjct: 936 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL------EDDAFI 989
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
SLIDMY K GS+ ++F + E+ SWNAMI+G +G EA+ LF++M G
Sbjct: 990 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 1049
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA- 547
PD +T +GVL AC+H+GL+ EG +Y M GL P HY C++D+LGRAG LD+A
Sbjct: 1050 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 1109
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ + E M + D IW SLL++C++H+N+ +GE VA KL E+EP YVLLSN+YA L
Sbjct: 1110 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 1169
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W +V +VR+ M + + K GCSWIE+ V F+V ++ +EI + +L ++
Sbjct: 1170 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 1229
Query: 668 KRVGYVPNA-------SDDEAYEEQNG 687
++GY P+ S++E E+ G
Sbjct: 1230 SKMGYRPDTMSVQHDLSEEEKIEQLRG 1256
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 165/653 (25%), Positives = 291/653 (44%), Gaps = 124/653 (18%)
Query: 5 RSVKQIVGD------LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQ 57
R+V++ VGD L LL + + K + R++H + S + ++ +
Sbjct: 419 RTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 478
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
R+I +YA CG +R VFD + +KN+F
Sbjct: 479 TRIITMYAMCGSPDDSRFVFDALRSKNLF------------------------------- 507
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHAL 176
WN+++S +++++ + E L F++M S L + +++ + ACAG D +G VH L
Sbjct: 508 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 567
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ K+ DV++G+AL+ YG G V+ A ++FD M ERN+VSWNS+I + NG + ++
Sbjct: 568 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 627
Query: 237 LEVFVRMMAS----GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ MM PD TL +V+ CA G +H ++ +L +LVL N
Sbjct: 628 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNN 686
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE----- 347
AL+DMY+KCG + A+ +F +NVVS +MV G++ + +ML
Sbjct: 687 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 746
Query: 348 ------------------------------------RNVVSWNALIAGYTQNGENEEALG 371
N + NA +A Y + G A
Sbjct: 747 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 806
Query: 372 LFRLLKRESV-------------------------------CPTHYTFGNLLNACANLAD 400
+F ++ ++V P +T +LL+AC+ L
Sbjct: 807 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 866
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+LG++ H ++++ L E D+FV S++ +Y+ CG + +F+ M ++ VSW
Sbjct: 867 LRLGKEVHGFIIRNWL------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N +I G QNG+ ALG+F++M+L G + ++M+ V ACS + GR+ + K
Sbjct: 921 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 980
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H L ++D+ + G + ++ + + + A W +++ +H
Sbjct: 981 -HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 1031
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 324/553 (58%), Gaps = 36/553 (6%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG--RVSCARRVFDGMRER 215
+ AC + K QVHA L K+ + D + + ++ + + A VFD + ER
Sbjct: 22 IKACKSMRELK---QVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 216 NIVSWNSLITCY-EQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQ 273
N +WN++I E DAL VF +M++ +EP++ T SV+ ACA +A EG Q
Sbjct: 79 NCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQ 138
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM-----PIRNVVSE------ 322
+H L++ + ++ V+ N L+ MY CG + +A +F R +RN+V +
Sbjct: 139 VHGLLLKFGLVDDEFVVTN-LLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREF 197
Query: 323 -----TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLL 376
MV GYA+ ++K+AR +F +M +R+VVSWN +I+GY QNG +EA+ +F R++
Sbjct: 198 NVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMM 257
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P T ++L A + L L+LG+ H + K+ +R D +G++L+DMY
Sbjct: 258 QMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRI------DDVLGSALVDMY 311
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS+E ++FE + + + ++WNA+I G A +G + +M CG P VT I
Sbjct: 312 AKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYI 371
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSHAGLV+EGR +F+ M GL P +HY CMVDLLGRAG L+EA+ LI MPM
Sbjct: 372 AILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPM 431
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+PD VIW +LL A K+H+NI +G A+ L+++ P +SG YV LSNMYA G W V V
Sbjct: 432 KPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAV 491
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R +M+ + K PGCSWIEI G ++ F+V+D H K+I+ +L+ ++ ++ G++P+
Sbjct: 492 RLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDT 551
Query: 677 SD-----DEAYEE 684
+ DE ++E
Sbjct: 552 TQVLLKMDEKHKE 564
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 194/433 (44%), Gaps = 94/433 (21%)
Query: 89 NSIITGLLKWGFIDD------ASRLFASMPERDQCSWNSMVSGFAQ-HDRFSEALGYFVK 141
N+I T +L+ D A +F +PER+ +WN+++ A+ DR +AL F +
Sbjct: 47 NAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQ 106
Query: 142 MHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD--------------- 185
M SE ++++F S L ACA G QVH LL K D
Sbjct: 107 MLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCG 166
Query: 186 --------------------------------VYMGSALIDMYGKCGRVSCARRVFDGMR 213
V + + ++D Y + G + AR +FD M
Sbjct: 167 SMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMA 226
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGL 272
+R++VSWN +I+ Y QNG +A+E+F RMM G + P+ VTL SV+ A + L + G
Sbjct: 227 QRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGK 286
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+H + K+R D VLG+ALVDMYAKCG + +A VF+R+P
Sbjct: 287 WVHLYAEK-NKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLP----------------- 328
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+ NV++WNA+I G +G+ + +++ + P+ T+ +L
Sbjct: 329 --------------QNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAIL 374
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+AC++ + GR +V G + I ++D+ + G +E+ + M
Sbjct: 375 SACSHAGLVDEGRSFFNDMVNS-----VGLKPKIEHYGCMVDLLGRAGYLEEAEELILNM 429
Query: 453 -VERDWVSWNAMI 464
++ D V W A++
Sbjct: 430 PMKPDDVIWKALL 442
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 17/313 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF---- 77
F +L +C +++ ++VH ++K + F+ L+ +Y CG + A +F
Sbjct: 120 FPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNV 179
Query: 78 ---DKMSNK---------NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
D + N NV N ++ G + G + A LF M +R SWN M+SG
Sbjct: 180 EGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISG 239
Query: 126 FAQHDRFSEALGYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
+AQ+ + EA+ F +M L + + S L A + ++G VH K++
Sbjct: 240 YAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRI 299
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
D +GSAL+DMY KCG + A +VF+ + + N+++WN++I +G A+D RM
Sbjct: 300 DDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRME 359
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI P +VT +++SAC+ EG ++ L+ + +VD+ + G L
Sbjct: 360 KCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYL 419
Query: 305 NEARCVFDRMPIR 317
EA + MP++
Sbjct: 420 EEAEELILNMPMK 432
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/579 (35%), Positives = 319/579 (55%), Gaps = 45/579 (7%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY--FVKMHSENFALSEYSFGSALSAC 161
A RL + W+S+V F+ + L + + +M S ++F L A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
D Q HA + K + SD+++ ++LI Y CG RVFDG ++++VSW
Sbjct: 115 FKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 222 SLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
++I + +N + +A+ FV M SG+ +E+T+ SV+ A + G IH +
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
++R D+ +G++LVDMY KCG ++A+ V
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKV------------------------------- 262
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F +M RNVV+W ALIAGY Q E+ + +F + + V P T ++L+ACA++ L
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
GR+ H +V+K+ + E + VG +LID Y KCG +E+ +FE + E++ +W
Sbjct: 323 HRGRRVHCYVIKNSI------EINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWT 376
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
AMI G A +GY A+ LF ML P+ VT I VL AC+H GLVEEGR+ F SM +
Sbjct: 377 AMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKER 436
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
L P DHY CMVDL GR G L+EAK LIE MPM+P +WG+L +C +H++ LG+Y
Sbjct: 437 FNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKY 496
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
A ++++++PS+SG Y LL+N+Y+E W +V RVRK M+ + VVK PGCSWIE+ G ++
Sbjct: 497 AASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLH 556
Query: 642 VFMVKDKRHPL-NKEIYLVLKMLTREMKRVGYVPNASDD 679
F+ D + PL + ++Y L + +M+ +P+ +D
Sbjct: 557 EFIAFDDKKPLESDDLYKTLDNVGVQMR----LPDELED 591
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 208/430 (48%), Gaps = 71/430 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + + ++ + HA I+K F S++F++N LI Y+ C
Sbjct: 107 FPPLLKAVFKLRD-ANPFQFHAHILKFGFDSDLFVRNSLISGYSNC-------------- 151
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
GL ++G SR+F ++D SW +M+ GF ++D EA+ YFV+
Sbjct: 152 ------------GLFEFG-----SRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVE 194
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCG 200
M A +E + S L A + D + G +H L R DV++GS+L+DMYGKCG
Sbjct: 195 MKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCG 254
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A++VFD M RN+V+W +LI Y Q + VF M+ S + P+E TL+SV+S
Sbjct: 255 CYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLS 314
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA + A G ++H +++ + + +G L+D YAKCG L EA VF+R+ +NV
Sbjct: 315 ACAHVGALHRGRRVHCYVIK-NSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVY 373
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLF--- 373
+ T+M++G+A A +F ML +V V++ +++ G EE LF
Sbjct: 374 TWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSM 433
Query: 374 ------------------------------RLLKRESVCPTHYTFGNLLNACANLADLQL 403
L++R + PT+ +G L +C D +L
Sbjct: 434 KERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYEL 493
Query: 404 GRQAHTHVVK 413
G+ A + V+K
Sbjct: 494 GKYAASRVIK 503
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 336/638 (52%), Gaps = 69/638 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C +V +H +KS + +F+ + L+D+Y K G VF+ M+ +NV
Sbjct: 158 LKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNV 217
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+W ++I GL+ G CS + L YF +M
Sbjct: 218 VSWTAVIVGLVHAG-----------------CSL--------------DGLSYFSEMWRS 246
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
++F AL A A S G +HA K ++ Y+ + L MY KC +
Sbjct: 247 KVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYV 306
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+F M ++VSW +LI Y Q G AL+ F RM S + P+E T ASV+SACA+L
Sbjct: 307 MRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANL 366
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
A K G QIH +R L + L + N+++ +Y+KCG L EA VFD M ++++S
Sbjct: 367 AITKWGEQIHGHALRL-GLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIIS---- 421
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
W+ +I+ Y Q +EA + RE P
Sbjct: 422 ---------------------------WSTIISVYCQGSHAKEAFNYLSWMSREGPKPNE 454
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+ ++L+ C ++A L+ G+Q H + + GL + + V ++LI MY + G++++
Sbjct: 455 FALASVLSVCGSMALLEPGKQVHAYALCIGL------DHETMVHSALISMYSRSGNLQEA 508
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+IF+++ D VSW AMI G A++GY EA+ LF+ + G PD+VT IG+L AC+HA
Sbjct: 509 SKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHA 568
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLV+ G Y+ M+ E+ +AP K+HY C++DLL RAG L EA+ ++ MP D V+W +
Sbjct: 569 GLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWST 628
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC+ H ++ + A+++L + P+++G ++ L+N+Y+ GR E VRKLM+ +GV
Sbjct: 629 LLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGV 688
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
+K+PG SWI +N F+ + HPL+K+I +L++L
Sbjct: 689 IKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELL 726
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 226/495 (45%), Gaps = 49/495 (9%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N+ NS + L+K G I +A +F M RD+ SW ++++G+ +EAL F M
Sbjct: 83 NMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMW 142
Query: 144 SEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
++ ++ AL ACA ++ G +H KS + V++ SAL+DMY K G+
Sbjct: 143 VDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKT 202
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
VF+ M RN+VSW ++I G + D L F M S + D T A + A
Sbjct: 203 EQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKAS 262
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A G IHA+ ++ + + N L MY+KC K + +F +M +VVS
Sbjct: 263 AESGLLHYGKAIHAQTIK-QGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVS- 320
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
W LI Y Q G+ E AL F+ +++ V
Sbjct: 321 ------------------------------WTNLIMTYVQMGDEERALDAFKRMRKSDVS 350
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P YTF ++++ACANLA + G Q H H ++ GL + V NS+I +Y KCG +
Sbjct: 351 PNEYTFASVISACANLAITKWGEQIHGHALRLGLV------DALSVSNSIITLYSKCGLL 404
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
++ +F+ M +D +SW+ +I Q + EA M G KP+ + VL C
Sbjct: 405 QEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVC 464
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDH----YTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L+E G++ + + L DH ++ ++ + R+G L EA + +++
Sbjct: 465 GSMALLEPGKQVHA-----YALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIK-NN 518
Query: 559 DAVIWGSLLAACKVH 573
D V W +++ H
Sbjct: 519 DIVSWTAMINGYAEH 533
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 211/468 (45%), Gaps = 69/468 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS FA L + S + + +HA+ IK F ++ N L +Y+KC ++F
Sbjct: 251 DSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF 310
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
KMS +V +W ++I ++ G D R AL
Sbjct: 311 GKMSTPDVVSWTNLIMTYVQMG---DEER----------------------------ALD 339
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + +EY+F S +SACA K G Q+H + + + +++I +Y
Sbjct: 340 AFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYS 399
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A VFDGM ++I+SW+++I+ Y Q A +A M G +P+E LAS
Sbjct: 400 KCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALAS 459
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C S+A + G Q+HA + C L ++ ++ +AL+ MY++ G L EA +FD +
Sbjct: 460 VLSVCGSMALLEPGKQVHAYAL-CIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNN 518
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS T+M++GYA ++G ++EA+ LF +
Sbjct: 519 DIVSWTAMINGYA-------------------------------EHGYSQEAISLFENIS 547
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ P + TF +L AC + + LG + + S E +ID+
Sbjct: 548 SVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY-----GCIIDLLC 602
Query: 438 KCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ G + + + M D V W+ ++ C +G A+ ++ML
Sbjct: 603 RAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQML 650
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 39/372 (10%)
Query: 18 DSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
D SP FA ++ +C ++H ++ + + N +I +Y+KCG L A
Sbjct: 348 DVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEA 407
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
VFD M+ K++ +W++II S + Q
Sbjct: 408 SLVFDGMTRKDIISWSTII-------------------------------SVYCQGSHAK 436
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA Y M E +E++ S LS C + G QVHA + + SALI
Sbjct: 437 EAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALI 496
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY + G + A ++FD ++ +IVSW ++I Y ++G + +A+ +F + + G+ PD V
Sbjct: 497 SMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYV 556
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +++AC G + + ++ ++D+ + G+L+EA +
Sbjct: 557 TFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616
Query: 314 MPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA---GYTQNGENEEA 369
MP + V ++++ + A +ML + S A I Y+ +G EEA
Sbjct: 617 MPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEA 676
Query: 370 LGLFRLLKRESV 381
+ +L+K + V
Sbjct: 677 AHVRKLMKSKGV 688
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 97/207 (46%), Gaps = 7/207 (3%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ N+ S + K + AR MF KM R+ +SW LIAGY + EAL LF
Sbjct: 81 VPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSN 140
Query: 376 LKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ +S + + L ACA LG + + HG SG + +FV ++L+D
Sbjct: 141 MWVDSGLQKDQFVVSVALKACA------LGMNVYFGELLHGFSVKSGLINSVFVSSALVD 194
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MYMK G E GC +FE M R+ VSW A+IVG G + L F +M D T
Sbjct: 195 MYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHT 254
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKE 521
L A + +GL+ G+ + K+
Sbjct: 255 FAVALKASAESGLLHYGKAIHAQTIKQ 281
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/619 (35%), Positives = 342/619 (55%), Gaps = 47/619 (7%)
Query: 57 QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ 116
N L+ + + G + AR +F+KMS+ V + +I G G ++DA +LF MP +D
Sbjct: 53 SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDL 112
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SWNSM+ G + + A F KM SE + S + G ++F +V
Sbjct: 113 ISWNSMLKGCLKCGDLTMACNMFDKM-------SERNVVSWTTIINGLLEFGR-VEVAEC 164
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
L + + DV ++++ + GRV A +F+ M RN++SW S+I + NG + +A
Sbjct: 165 LFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEA 224
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
L VF +M+AS + TLA ++ACA++ G+QIH +++ N+ +
Sbjct: 225 LVVFHKMLAS-FKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYI------- 276
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
S++S YA + +A +F + RNVV W AL
Sbjct: 277 -------------------------SASLISFYANCKLIDNASSIFNDNVSRNVVVWTAL 311
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
+ GY N + +AL +F+ + R SV P + + LN+C L + GR+ H V H L
Sbjct: 312 LTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHA--VAHKL 369
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
G ESDIFV NSL+ MY KCG + DG +F M ++ VSWN++IVGCAQ+G+G A
Sbjct: 370 ----GLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWA 425
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L LF +M+ PD +T+ G+L AC H+G++ +GR +F K G+ +HY+ MVD
Sbjct: 426 LTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVD 485
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LLGR G L+EA+ LI MP + + ++W +LL++ H N+ + E AK +L+++P+ S
Sbjct: 486 LLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAA 545
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
Y LLSN+YA G+W EV ++RK M+ G++KQPG SWI I G + F+ D+ HPL+++I
Sbjct: 546 YTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKI 605
Query: 657 YLVLKMLTREMKRVGYVPN 675
Y L+ L ++K +GYVP+
Sbjct: 606 YQKLEWLGGKLKELGYVPD 624
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 31/297 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
SS A L +C + ++H I+K+ + +I LI YA C + A +F+
Sbjct: 239 SSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFN 298
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++NV W +++T G+ + R ++AL
Sbjct: 299 DNVSRNVVVWTALLT-------------------------------GYGLNCRHTDALQV 327
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
F M + ++ S SAL++C G G +VHA+ K SD+++ ++L+ MY K
Sbjct: 328 FKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTK 387
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG ++ VF M +N+VSWNS+I Q+G AL +F +M+ + ++PDE+TLA +
Sbjct: 388 CGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGL 447
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+SAC +G + + +++VD+ + G+L EA + MP
Sbjct: 448 LSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMP 504
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+ S L+SC ++V R VHA K S+IF+ N L+ +Y KCG + VF
Sbjct: 339 NQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVF 398
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRFS 133
+MS KNV +WNSII G + GF A LFA M + D+ + ++S +
Sbjct: 399 TRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLT 458
Query: 134 EALGYFVKMHSENFAL 149
+ +F K +NF +
Sbjct: 459 KGRCFF-KHFGKNFGI 473
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 333/608 (54%), Gaps = 43/608 (7%)
Query: 16 FLDSSPFAKLLDS----CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA-KCGCL 70
F D+ KLLD L+ + +++HA ++ S + + +++I +YA L
Sbjct: 831 FSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDL 890
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A KVF ++ + F WN+ ++ G AQ D
Sbjct: 891 VSAHKVFKQIESPTTFLWNT-------------------------------LLRGLAQSD 919
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+A+ ++ K + +F L ACA + K G Q+H + K + D+++ +
Sbjct: 920 APKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSN 979
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
+LI +Y CG ++CAR VF+ M +++VSWNSLI Y Q+ + L +F M A ++
Sbjct: 980 SLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQA 1039
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D+VT+ V+SAC L + R + + D+ LGN L+D Y + G+L A V
Sbjct: 1040 DKVTMVKVISACTHLGDWSMA-DCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKV 1098
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F +M +N V+ +M++ YAK ++ SA+ +F ++ ++++SW+++I Y+Q ++L
Sbjct: 1099 FSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSL 1158
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LFR ++R V P ++L+ACA+L L LG+ H +V ++ ++ +D + N
Sbjct: 1159 ELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIK------ADTIMEN 1212
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLIDM+ KCG V++ ++F M E+D +SWN++I+G A NG+ EAL +F ML G +P
Sbjct: 1213 SLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRP 1272
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ VT +GVL AC++ LVEEG +F M H L P HY C+VD+L RAG L++A +
Sbjct: 1273 NEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSF 1332
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I MP+ PD V+W LL AC+ H N+ + E KKL E++P NS +LLSN+YA RW
Sbjct: 1333 ISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRW 1392
Query: 611 GEVVRVRK 618
+ + VR+
Sbjct: 1393 SDAMNVRR 1400
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 241/424 (56%), Gaps = 13/424 (3%)
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +VFD ++ W + + Y +AL +F + + D V+ ACA
Sbjct: 437 ALKVFD----QSPAPWRAFLKAYSHGPFPLEALHLF-KHARQHLADDTFVFTFVLKACAG 491
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
L + G Q+HA +++ + + AL+++Y L EAR VFD MP++NVVS
Sbjct: 492 LGWHRAGAQLHALVVQ-KGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNV 550
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++G+A V+ ARL+F +M RNVVSW LI GYT+ EAL L R + + P+
Sbjct: 551 MITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPS 610
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++ A +NL + +G + + K G+ SD VGNSLID+Y K GSV++
Sbjct: 611 EITVLAVIPAISNLGGILMGEMLNGYCEKKGIM------SDARVGNSLIDLYAKIGSVQN 664
Query: 445 GCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
++F+ M++R + VSW ++I G A +G EAL LF +M G KP+ +T + V+ ACS
Sbjct: 665 SLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACS 724
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H GLVE+G +F SM E+ + P H+ C++D+LGRAG L EA+ +IE +PM+ + +W
Sbjct: 725 HGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVW 784
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
LL C + + +GE K + ++E + G + +LSN+ ELGR+ + + RKL+ +R
Sbjct: 785 RILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQR 844
Query: 624 GVVK 627
+VK
Sbjct: 845 KIVK 848
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 259/558 (46%), Gaps = 56/558 (10%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++HA +++ F ++ LI+VY CL ARKVFD+M KNV +WN +ITG WG
Sbjct: 500 QLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWG 559
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
++ A LF MP R+ SW ++ G+ + ++EAL M + + SE + + +
Sbjct: 560 EVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIP 619
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE-RNIV 218
A + MG ++ K SD +G++LID+Y K G V + +VFD M + RN+V
Sbjct: 620 AISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLV 679
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I+ + +G + +ALE+F M +GI+P+ +T SV++AC+ ++GL +
Sbjct: 680 SWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSM 739
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ + ++ ++DM + G+L EA + + +P
Sbjct: 740 VYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLP----------------------- 776
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGE---NEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+E NV W L+ ++ GE E A+ + L+RES N+L
Sbjct: 777 -------MEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERES-GGDFAVLSNVLTEL 828
Query: 396 ANLADLQLGR------------QAHTHVVK--HGLRFLSGEESDIFVGNSLIDMY-MKCG 440
+D + R +A VK H +SG + + + +I +Y +
Sbjct: 829 GRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQS 888
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ ++F+ + WN ++ G AQ+ +A+ +KK G KPD++T VL
Sbjct: 889 DLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLK 948
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
AC+ +EG + + + K L L D + ++ L G L A+++ M ++
Sbjct: 949 ACAKTCAPKEGEQMHNHVIK---LGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVK- 1004
Query: 559 DAVIWGSLLAACKVHRNI 576
D V W SL+ H +
Sbjct: 1005 DVVSWNSLIGGYSQHNRL 1022
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 184/415 (44%), Gaps = 89/415 (21%)
Query: 105 SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
SR + ++ W + + ++ EAL F K ++ A + F L ACAG
Sbjct: 434 SRTALKVFDQSPAPWRAFLKAYSHGPFPLEALHLF-KHARQHLADDTFVFTFVLKACAGL 492
Query: 165 VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
+ G Q+HAL+ + + Y+ +ALI++Y + AR+VFD M +N+VSWN +I
Sbjct: 493 GWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMI 552
Query: 225 TCYEQNGPA-------------------------------SDALEVFVRMMASGIEPDEV 253
T + G ++AL + MMA GI P E+
Sbjct: 553 TGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEI 612
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEK--LRNDLVLGNALVDMYAKCGKLNEARCVF 311
T+ +V+ A ++L G ++ CEK + +D +GN+L+D+YAK G + + VF
Sbjct: 613 TVLAVIPAISNLGGILMGEMLNG---YCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVF 669
Query: 312 DRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
D M RN+VS TS++SG+A +G + EAL
Sbjct: 670 DEMLDRRNLVSWTSIISGFA-------------------------------MHGLSVEAL 698
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE------ES 424
LF ++R + P TF +++NAC +H +V+ GL F +
Sbjct: 699 ELFAEMRRAGIKPNRITFLSVINAC-----------SHGGLVEQGLAFFKSMVYEYNIDP 747
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALG 478
+I +IDM + G + + +I E + +E + W ++ C++ YG A+G
Sbjct: 748 EIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSK--YGEVAMG 800
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/606 (34%), Positives = 330/606 (54%), Gaps = 67/606 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A+ +F ++ E +Q WN+M+ G A +L +V M S + Y+F L +CA
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY--------------------------- 196
S F G Q+H + K + D+Y+ ++LI MY
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 197 ----GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
G + A+++FD + +++VSWN++I+ Y + G +ALE+F MM + PDE
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T +V+SACA + + G Q+H+ + ++L + NAL+D+Y+KCG+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHS-WVDDHGFDSNLKIVNALIDLYSKCGE--------- 246
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
V++A +F + ++V+SWN LI GYT +EAL L
Sbjct: 247 ----------------------VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLL 284
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ + R P T ++L ACA+L + +GR H ++ K L G + + SL
Sbjct: 285 FQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKR----LKGVTNASSLRTSL 340
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
IDMY KCG +E ++F +M+ + SWNAMI G A +G + LF +M G +PD
Sbjct: 341 IDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDD 400
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T +G+L ACSH+G+++ GR F SM++++ + P +HY CM+DLLG +G EA+ +I
Sbjct: 401 ITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 460
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
M M+PD VIW SLL ACK+H N+ L E A+ L++IEP N Y+LLSN+YA GRW +
Sbjct: 461 TMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWED 520
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V R+R L+ + + K PGCS IE+ V F+V DK HP N+EIY +L+ + ++ G+
Sbjct: 521 VARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGF 580
Query: 673 VPNASD 678
VP+ S+
Sbjct: 581 VPDTSE 586
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 240/459 (52%), Gaps = 44/459 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F LL SC +SK+ ++ +++H +++K F ++++ LI +Y + L A KVF
Sbjct: 63 NSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVF 122
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+ S+++V ++ ++ITG G I A +LF +P +D SWN+M+SG+A+ + EAL
Sbjct: 123 DRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALE 182
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N E ++ + LSACA S ++G QVH+ + + S++ + +ALID+Y
Sbjct: 183 LFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYS 242
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V A +F G+ ++++SWN+LI Y +AL +F M+ SG P++VT+ S
Sbjct: 243 KCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 302
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ ACA L A G IH + R + + N L +L+DMYAKCG + A VF+
Sbjct: 303 VLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN---- 358
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
ML +++ SWNA+I G+ +G + + LF +
Sbjct: 359 ---------------------------SMLHKSLSSWNAMIFGFAMHGRADASFDLFSRM 391
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLI 433
++ + P TF LL+AC++ L LGR H R ++ + + +I
Sbjct: 392 RKIGIEPDDITFVGLLSACSHSGMLDLGR--------HIFRSMTQDYKMTPKLEHYGCMI 443
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
D+ G ++ + TM +E D V W +++ C +G
Sbjct: 444 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 319/555 (57%), Gaps = 45/555 (8%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW++++ GFAQ+ EAL +M + F + + S L ACA + +G ++H +
Sbjct: 13 SWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYV 72
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
++ + S+ ++ + L+D+Y +C + A ++F G +N+VS+N++I Y +NG A
Sbjct: 73 TRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAK 132
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
E+F +M G D ++ S++S A L++CE L+
Sbjct: 133 ELFDQMELVG--KDTISWNSMISGYAD------------NLLKCEDLK------------ 166
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSW 353
A+ FD + R+ + ++SGYA + +++ + + KM E NV +W
Sbjct: 167 --------AAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTW 218
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
N +I+G+ +NG NE AL LF ++ S+ P YT G +L ACA LA + G+Q H H ++
Sbjct: 219 NGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIR 278
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
G E D+ +G +L+DMY KCGS++ +++ + + VS NAM+ A +G+G
Sbjct: 279 QGY------ELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHG 332
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
E + LF+ ML G +PDHVT + VL +C HAG VE G ++F M+ + + P HYTC
Sbjct: 333 DEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTC 391
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
+VDLL RAG LDEA L++ +P +PD+V+WG+LL C + N+ LGE A+ L+E+EP+N
Sbjct: 392 IVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNN 451
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
+G YVLL+N+YA GRW ++ R R++++ RG+ K PGCSWIE ++VF+ DK H
Sbjct: 452 TGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKT 511
Query: 654 KEIYLVLKMLTREMK 668
++IY L L M+
Sbjct: 512 EDIYTTLDNLNTHMR 526
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 205/457 (44%), Gaps = 80/457 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
++ A +L +C R ++++ + +H + + F S F+ N L+DVY +C + A K+F
Sbjct: 45 NARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIF 104
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEA 135
S KNV ++N++I G + G ++ A LF M +D SWNSM+SG+A +
Sbjct: 105 SGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADN------ 158
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ E+ ++ +F D + LI
Sbjct: 159 -----LLKCEDLKAAQLAFDGVT------------------------ERDTATWNVLISG 189
Query: 196 YGKCGRVSCARRVFDGMR----ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
Y C ++ + + M+ E N+ +WN +I+ + +NG AL +F M S + PD
Sbjct: 190 YACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPD 249
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T+ ++ ACA LA G Q+HA +R + D+ +G ALVDMYAKCG + A V+
Sbjct: 250 IYTVGIILPACARLATIARGKQVHAHSIR-QGYELDVHIGAALVDMYAKCGSIKHAMQVY 308
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+R+ N+VS+ +M++ YA +G +E +
Sbjct: 309 NRISNPNLVSQNAMLTAYA-------------------------------MHGHGDEGIA 337
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LFR + P H TF ++L++C + ++ G + + + + +
Sbjct: 338 LFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNV------TPSLKHYTC 391
Query: 432 LIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D+ + G +++ + + + + D V W A++ GC
Sbjct: 392 IVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGC 428
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 335/620 (54%), Gaps = 79/620 (12%)
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
+ D+ RLF ++ +W S++ + H ++LG F+ M + F S L
Sbjct: 55 LLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLK 114
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK-------------CGRV---- 202
+CA +D +G +H + + D+Y G+AL++MY K G V
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174
Query: 203 ---------------SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
R++F+ M E+++VSWN++I +NG + L + M +
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++PD TL+SV+ A G +IH +R + L D+ + ++L+DMYAKC ++ +
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIR-QGLDADIYVASSLIDMYAKCTRVAD- 292
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
S R+ FT + ER+ +SWN++IAG QNG +
Sbjct: 293 -----------------------------SCRV-FTLLTERDGISWNSIIAGCVQNGLFD 322
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
E L FR + + P Y+F +++ ACA+L L LG+Q H ++ ++G + +IF
Sbjct: 323 EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF------DENIF 376
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ +SL+DMY KCG++ +IF+ M RD VSW AMI+GCA +G +A+ LF++M G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
K VL ACSH GLV+E KYF+SM+++ G+AP +HY + DLLGRAG L+EA
Sbjct: 437 IK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I M + P IW +LL+AC+VH+NI + E VA ++LE++P+N+G Y+LL+N+Y+
Sbjct: 490 YDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 549
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
RW E + R MR+ G+ K P CSWIE+ V FM D+ HP ++I +++L M
Sbjct: 550 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 609
Query: 668 KRVGYVPNASD--DEAYEEQ 685
++ GYVP+ S+ + EEQ
Sbjct: 610 EKEGYVPDTSEVHHDVEEEQ 629
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 199/386 (51%), Gaps = 20/386 (5%)
Query: 4 QRSVKQIVGDLA---FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
+S+ +G LA + D + F +L SC ++ +H II+ +++ N L
Sbjct: 88 HQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNAL 147
Query: 61 IDVYAKCGCL-------YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
+++Y+K L GA +VFD+M+ + T + +L D ++F MPE
Sbjct: 148 MNMYSKLRFLEESGRQRLGAGEVFDEMTER---TRSVRTVSVLSE---DSVRKIFEMMPE 201
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+D SWN++++G A++ + E L +M N ++ S L A +VD G ++
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI 261
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H + +D+Y+ S+LIDMY KC RV+ + RVF + ER+ +SWNS+I QNG
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLF 321
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+ L F +M+ + I+P + +S++ ACA L G Q+H + R ++ + ++
Sbjct: 322 DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR-NGFDENIFIASS 380
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
LVDMYAKCG + A+ +FDRM +R++VS T+M+ G A A +F +M +
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI--- 437
Query: 354 NALIAGYTQNGENEEALGLFRLLKRE 379
A++ + G +EA F + R+
Sbjct: 438 KAVLTACSHGGLVDEAWKYFNSMTRD 463
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 38/305 (12%)
Query: 3 TQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
T R ++++ G DS + +L + +S + +H I+ ++I++ + LID
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+YAKC + D+ R+F + ERD SWNS+
Sbjct: 283 MYAKCT-------------------------------RVADSCRVFTLLTERDGISWNSI 311
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++G Q+ F E L +F +M YSF S + ACA +G Q+H ++++ +
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++++ S+L+DMY KCG + A+++FD MR R++VSW ++I +G A DA+E+F +
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M GI+ +V++AC+ E + + R + + A+ D+ + G
Sbjct: 432 METEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAG 484
Query: 303 KLNEA 307
+L EA
Sbjct: 485 RLEEA 489
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 48/250 (19%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S F+ ++ +C ++ +++H I ++ F IFI + L+D+YAKC
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC----------- 388
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
G I A ++F M RD SW +M+ G A H + +A+
Sbjct: 389 --------------------GNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428
Query: 139 FVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + L+AC+ G VD + +++ + V +A+ D+
Sbjct: 429 FEQMETEGIK-------AVLTACSHGGLVD-EAWKYFNSMTRDFGIAPGVEHYAAVSDLL 480
Query: 197 GKCGRVSCARRVFDGMRERNIVS-WNSLITCYEQNGPASDALEVFVRMMASGIEPDE--- 252
G+ GR+ A GM S W +L++ + A +V R++ ++P+
Sbjct: 481 GRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILE--VDPNNTGA 538
Query: 253 -VTLASVVSA 261
+ LA++ SA
Sbjct: 539 YILLANIYSA 548
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 333/630 (52%), Gaps = 85/630 (13%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
R+ H IK +++ N I A+ G + AR+VFD+M +++ +WNSIITG K
Sbjct: 31 NRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQVFDEMPHRDTVSWNSIITGYWK 90
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
G D++ RLF MP ++ SWNSM++G + +R EA YF M N A S+ +
Sbjct: 91 NGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTA----SWNAM 146
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
+S G V + + L + +V +A++D Y K G + AR +F+ M ++N+
Sbjct: 147 IS---GLVRYDRVEEASRLFEEM-PRRNVISYTAMVDGYAKIGEIEQARALFNCMPQKNV 202
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSW +I+ Y +NG +A +F +M PD+
Sbjct: 203 VSWTVMISGYVENGKFDEAENLFEQM------PDK------------------------- 231
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++V A++ Y K GK ++A+ +FD++P R++ S +M++GYA
Sbjct: 232 ---------NIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYA------- 275
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
QNG EEAL L + + + P H T ++L AC++
Sbjct: 276 ------------------------QNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSS 311
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
LA LQ GR+ H V+K SG ES I + N+LI MY KCGS+ D F + D
Sbjct: 312 LASLQEGRKTHVLVLK------SGYESRISICNALITMYCKCGSILDSELAFRQIDHPDV 365
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSS 517
VSWNAMI A++G+ AL F +M +PD +T + +L AC HAG V E +F+S
Sbjct: 366 VSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNS 425
Query: 518 MSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
M + + +H+ C+VD+L R G +++A +I+ MP + D IWG+LLAAC VH N+
Sbjct: 426 MIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVK 485
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LGE AKK++E+EP NSG YV+LSN+YA G WGEV RVR LMR++GV KQP SW+EI
Sbjct: 486 LGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEID 545
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
V+ F+ D HP I L LK + +M
Sbjct: 546 NKVHFFLGDDASHPEIHRIRLELKGMKLQM 575
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S +L +C S+ + R+ H ++KS + S I I N LI +Y KCG + + F
Sbjct: 298 DHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAF 357
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
++ + +V +WN++I + GF D A F M E D ++ S++S +
Sbjct: 358 RQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVH 417
Query: 134 EALGYFVKM 142
E+L +F M
Sbjct: 418 ESLNWFNSM 426
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/658 (34%), Positives = 350/658 (53%), Gaps = 76/658 (11%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N++++ L+++G A R+FA MPERD SWN MV G+ + EAL + +M
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y+F L +C G D++MG +VHA + + ++ +V + +AL+ MY KCG V AR+V
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA-- 266
FD M + +SWN++I + +NG + LE+F+ M+ ++P+ +T+ SV A L+
Sbjct: 253 FDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDI 312
Query: 267 ---------AFKEG-----------LQIHARLMRCEKLRN--------DLVLGNALVDMY 298
A K G +Q++A L + R D + A++ Y
Sbjct: 313 TFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGY 372
Query: 299 AKCGKLNEARCVFDRMPIRNV--------------------------------------- 319
K G ++A V+ M + NV
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYV 432
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V +++ YAK+ + A +F M E++VVSW+++IAG+ N N EAL FR + +
Sbjct: 433 VVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD 492
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P TF L ACA L+ G++ H HV++ G+ + + ++ N+LID+Y+KC
Sbjct: 493 -VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAY------EGYLPNALIDLYVKC 545
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G F +D VSWN MI G +G G AL F +M+ GE PD VT + +L
Sbjct: 546 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALL 605
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
CACS G+V EG + F SM+ ++ + P HY CMVDLL R G L EA I MP+ PD
Sbjct: 606 CACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPD 665
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL C++HR++ LGE AK +LE+EP+++G +VLL ++YA+ G W ++ RVRK
Sbjct: 666 AAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKT 725
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
MR++G+ GCSW+E+ G V+ F+ D+ HP +EI VL+ + MK G P S
Sbjct: 726 MREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES 783
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 197/407 (48%), Gaps = 41/407 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+G+A++ M + G A RVF M ER++ SWN ++ Y + G +AL+++ RMM +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD T V+ +C + ++ G ++HA ++R VL NAL+ MYAKCG + A
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVL-NALMTMYAKCGDVVAA 249
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R VFD M + + +S +M+ AG+ +NGE
Sbjct: 250 RKVFDSMAVMDCISWNAMI-------------------------------AGHFENGECN 278
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L LF + ++ V P T ++ A L+D+ ++ H VK G +D+
Sbjct: 279 AGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGF------ATDVA 332
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
NSLI MY G + +F M RD +SW AMI G +NG+ +AL ++ M +
Sbjct: 333 FCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNN 392
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD +T+ L AC+ G ++ G K +++ G ++++ ++ +D+A
Sbjct: 393 VSPDDITIASALAACACLGSLDVGVK-LHELAESKGFMSYVVVTNALLEMYAKSKRIDKA 451
Query: 548 KTLIEAMPMQPDAVIWGSLLAA-CKVHRNIMLGEYVAKKLLEIEPSN 593
+ + MP + D V W S++A C HRN Y L +++P++
Sbjct: 452 IEVFKCMP-EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNS 497
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 151/332 (45%), Gaps = 54/332 (16%)
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+S PDE ++ C A + GL+ A L LGNA++ M + G+
Sbjct: 87 SSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFG-LRLGNAMLSMLVRFGET 145
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
A VF +MP R+V S MV GY KA G
Sbjct: 146 WHAWRVFAKMPERDVFSWNVMVGGYGKA-------------------------------G 174
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
EEAL L+ + V P YTF +L +C + D ++GR+ H HV LRF EE
Sbjct: 175 LLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHV----LRFGFAEEV 230
Query: 425 DIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
D+ N+L+ MY KCG V ++F++M D +SWNAMI G +NG L LF ML
Sbjct: 231 DVL--NALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTML 288
Query: 485 LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE-HGLAPLKDHYT------CMVDL 537
+P+ +T+ V A +GL+ + + +KE HGLA + T ++ +
Sbjct: 289 QDEVQPNLMTITSVTVA---SGLLSD-----ITFAKEMHGLAVKRGFATDVAFCNSLIQM 340
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G + +A+T+ M + DA+ W ++++
Sbjct: 341 YASLGMMGQARTVFSRMDTR-DAMSWTAMISG 371
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V N+++ K ID A +F MPE+D SW+SM++GF + R EAL YF M +
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA 491
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + +F +AL+ACA + + G ++HA + + + + Y+ +ALID+Y KCG+
Sbjct: 492 D-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A F +++VSWN +I + +G AL F +M+ G PDEVT +++ AC+
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
EG ++ + + +L +VD+ ++ G+L EA + MPI
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPI 662
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ +HA +++ A E ++ N LID+Y KCG A F K+V +WN +I G +
Sbjct: 517 KEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAH 576
Query: 99 GFIDDASRLFASMPERDQC 117
G + A F M + +C
Sbjct: 577 GNGETALSFFNQMVKIGEC 595
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 321/558 (57%), Gaps = 42/558 (7%)
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKC--GRVSCARRVFDGMRERNIVSWNSLITCYE 228
TQ+H L+ +S + D Y+ AL+ Y A +VF + N+ WN +I
Sbjct: 50 TQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCL 109
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM--------- 279
+N A+ + RM+ P++ T ++ AC+ A +EG QIH ++
Sbjct: 110 ENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVH 168
Query: 280 -------------RCEKLR-------NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
R E R +D+V N ++D Y KCG L A+ +F +MP++N+
Sbjct: 169 IKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI 228
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S M++G AK ++ AR +F +M ER+ +SW++++ GY G +EAL +F+ ++RE
Sbjct: 229 GSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE 288
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + ++L AC+N+ + GR H ++ ++ ++ D +G +L+DMY KC
Sbjct: 289 ETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKL------DAVLGTALLDMYAKC 342
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ G +FE M ER+ +WNAMI G A +G +AL LF K+ KP+ +T++GVL
Sbjct: 343 GRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVL 402
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAG V++G + F +M + +G+ P +HY CMVDLLGR+G EA+ LI +MPM+P+
Sbjct: 403 TACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPN 462
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL AC++H N L E V K LLE+EP NSG YVLLSN+YA++GR+ +V ++RKL
Sbjct: 463 AAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKL 522
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
M+ RG+ PG S +++ G V+ F + D HP KEIY LK++ ++ G+ P+ S
Sbjct: 523 MKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQV 582
Query: 678 --DDEAYEEQNGSNSTSD 693
D + E++ N S+
Sbjct: 583 LFDIDEEEKETAVNYHSE 600
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 171/335 (51%), Gaps = 34/335 (10%)
Query: 17 LDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ--------------- 57
+D+ P + L +C +++V + R++H ++K S++ I+
Sbjct: 126 IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLED 185
Query: 58 ---------------NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFID 102
N +ID Y KCG L A+ +F +M KN+ +WN +I GL K G +
Sbjct: 186 ARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLG 245
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
DA +LF M ERD+ SW+SMV G+ R+ EAL F +M E + S L+AC+
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G VHA L ++ D +G+AL+DMY KCGR+ VF+ M+ER I +WN+
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I +G A DALE+F ++ ++P+ +TL V++ACA +GL+I +
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ +L +VD+ + G +EA + + MP++
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/547 (36%), Positives = 301/547 (55%), Gaps = 73/547 (13%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D+A ++F S+P SWN +++GF Q ++A+ M F +E ++ + L++
Sbjct: 8 MDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS 67
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C + D V AR +FD + ++ +W
Sbjct: 68 CIKARD-----------------------------------VHSARAMFDKISRPSVTTW 92
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
N+L++ Y Q D +E+F RM ++PD TLA ++S+C+ L G Q+H+ +R
Sbjct: 93 NTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR 152
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L ND+ + + LVDMY+KCG++ AR +
Sbjct: 153 F-LLHNDMFVASGLVDMYSKCGQIGIARSI------------------------------ 181
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
F KM ER+VV WN++I+G T + N+EA F+ ++ + PT ++ +++N+C+ L+
Sbjct: 182 -FNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSS 240
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ GRQ H V+K G + +++VG++LIDMY KCG+++D F+TM+ ++ V+W
Sbjct: 241 IPHGRQIHAQVMKDGY------DQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 294
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N MI G AQNG G +A+ LF+ ML +KPD VT I VL CSH+GLV++ +F+SM
Sbjct: 295 NEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMEN 354
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+G+ PL +HYTC++D LGRAG E + LI MP + D +IW LLAAC VH N LG+
Sbjct: 355 SYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGK 414
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
A+ L I+P N PYVLLSN+YA LGR G+ VR LM RGVVK G SWI+ V
Sbjct: 415 CAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGV 474
Query: 641 NVFMVKD 647
FMV D
Sbjct: 475 RAFMVAD 481
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 195/369 (52%), Gaps = 47/369 (12%)
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITG----------------LLKWGF------ 100
+Y KC + A KVF+ + + + +WN +ITG + + GF
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 101 -------------IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
+ A +F + +WN+++SG+ Q ++ + + F +M +N
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNV 120
Query: 148 ALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ LS+C+ G +DF G QVH+ + +D+++ S L+DMY KCG++ A
Sbjct: 121 QPDRTTLAVILSSCSKLGILDF--GRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIA 178
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R +F+ M ER++V WNS+I+ + +A + F +M +GI P E + AS++++C+ L
Sbjct: 179 RSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRL 238
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
++ G QIHA++M+ + ++ +G+AL+DMYAKCG +++AR FD M ++N+V+ M
Sbjct: 239 SSIPHGRQIHAQVMK-DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 297
Query: 326 VSGYAKASSVKSARLMFTKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-S 380
+ GYA+ A +F ML + + V++ A++ G + +G ++A+ F ++
Sbjct: 298 IHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYG 357
Query: 381 VCP--THYT 387
+ P HYT
Sbjct: 358 IIPLAEHYT 366
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 31/301 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC + + R+VH+ ++ +++F+ + L+D+Y+KCG + AR +F
Sbjct: 123 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 182
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+KM+ ERD WNS++SG H EA
Sbjct: 183 NKMT-------------------------------ERDVVCWNSIISGLTIHSLNKEAFD 211
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M +E S+ S +++C+ G Q+HA + K Y +VY+GSALIDMY
Sbjct: 212 FFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYA 271
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR FD M +NIV+WN +I Y QNG A+E+F M+ + +PD VT +
Sbjct: 272 KCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIA 331
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ C+ + + + + L+D + G+ E + +MP +
Sbjct: 332 VLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCK 391
Query: 318 N 318
+
Sbjct: 392 D 392
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 98/247 (39%), Gaps = 47/247 (19%)
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y K + A +F + +VSWN LI G+ Q G +A+ + L++ P T+
Sbjct: 2 YTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTY 61
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
NLL +C D+ R +
Sbjct: 62 SNLLASCIKARDVHSARA-----------------------------------------M 80
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + +WN ++ G Q + + LF++M +PD T+ +L +CS G++
Sbjct: 81 FDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGIL 140
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
+ GR+ S+ + D + +VD+ + G + A+++ M + D V W S+
Sbjct: 141 DFGRQVHSASVR---FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT-ERDVVCWNSI 196
Query: 567 LAACKVH 573
++ +H
Sbjct: 197 ISGLTIH 203
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 33/251 (13%)
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KC +++ ++FE++ VSWN +I G Q G +A+ + M G +P+ VT
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+L +C A V R F +S+ P + ++ + + L M
Sbjct: 61 YSNLLASCIKARDVHSARAMFDKISR-----PSVTTWNTLLSGYCQEEQHQDTIELFRRM 115
Query: 555 P---MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN-----SGPYVLLSNMYAE 606
+QPD +L++C + G V + N SG L +MY++
Sbjct: 116 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASG----LVDMYSK 171
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
G+ G + M +R VV W I+ + + H LNKE + K +
Sbjct: 172 CGQIGIARSIFNKMTERDVV-----CWNSIISGLTI-------HSLNKEAFDFFK----Q 215
Query: 667 MKRVGYVPNAS 677
M+ G +P S
Sbjct: 216 MRENGIMPTES 226
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 328/602 (54%), Gaps = 19/602 (3%)
Query: 88 WN------SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF-AQHDRFSEALGYFV 140
WN ++I+ L +G A+ +F R+ WNS V F + L F
Sbjct: 453 WNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFK 512
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
++H + + AL C +D +G ++H L K + DVY+ AL++ YG+C
Sbjct: 513 ELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW 572
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF M + WN I Q+ +E+F +M S ++ + T+ V+
Sbjct: 573 GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 632
Query: 261 ACAS-LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A S L G + H ++R D+ +G +L+DMY K L A+ VFD M RN+
Sbjct: 633 ASISELGFLNMGKETHGYVLR-NGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNI 691
Query: 320 VSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ S+VSGY+ + A + +M ++ ++V+WN +I+GY G +EAL F
Sbjct: 692 FAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQ 751
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+++E V P + LL ACA+L+ LQ G++ H +++G D+FV +LIDM
Sbjct: 752 MQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFI------EDVFVATALIDM 805
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y K S+++ ++F + + SWN MI+G A G G EA+ +F +M G PD +T
Sbjct: 806 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 865
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L AC ++GL+ EG KYF SM ++ + P +HY CMVDLLGRAG LDEA LI MP
Sbjct: 866 TALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP 925
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PDA IWG+LL +C++H+N+ E AK L ++EP+NS Y+L+ N+Y+ RW ++
Sbjct: 926 LKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDH 985
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R+LM GV + SWI+I V+VF +K HP +IY L L EMK++GYVP+
Sbjct: 986 LRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPD 1045
Query: 676 AS 677
+
Sbjct: 1046 VN 1047
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 147/283 (51%), Gaps = 4/283 (1%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ H ++++ F ++++ LID+Y K L A+ VFD M N+N+F WNS+++G
Sbjct: 645 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFK 704
Query: 99 GFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
G +DA RL M + D +WN M+SG+A EAL +F +M E + S
Sbjct: 705 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASI 764
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
L ACA + G ++H L ++ + DV++ +ALIDMY K + A +VF ++
Sbjct: 765 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 824
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+ + SWN +I + G +A+ VF M G+ PD +T +++SAC + EG +
Sbjct: 825 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 884
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ ++ L +VD+ + G L+EA + MP++
Sbjct: 885 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLK 927
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 208/508 (40%), Gaps = 127/508 (25%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ G DS ++ L +C R + +H +IK F +++++ L++ Y +C
Sbjct: 512 KELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC 571
Query: 68 GCLYGARKVFDKMSNKNVFTWN-SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
L A +VF +M N WN +II L
Sbjct: 572 WGLEKANQVFHEMPNPEALLWNEAIILNL------------------------------- 600
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYSSD 185
Q ++ + + F KM + L A + F MG + H + ++ + D
Sbjct: 601 -QSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCD 659
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
VY+G++LIDMY K ++ A+ VFD M+ RNI +WNSL++ Y G DAL + +M
Sbjct: 660 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 719
Query: 246 SGIEPDEVTLASVVS-----------------------------------ACASLAAFKE 270
GI+PD VT ++S ACASL+ ++
Sbjct: 720 EGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQK 779
Query: 271 GLQIHARLMRCEKLRN----DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
G +IH C +RN D+ + AL+DMY+K L A VF R I+N
Sbjct: 780 GKEIH-----CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR--IQN-------- 824
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+ + SWN +I G+ G +EA+ +F +++ V P
Sbjct: 825 ---------------------KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAI 863
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCG 440
TF LL+AC N + ++ G ++ +D + L +D+ + G
Sbjct: 864 TFTALLSACKN-----------SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAG 912
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGC 467
+++ + TM ++ D W A++ C
Sbjct: 913 YLDEAWDLIHTMPLKPDATIWGALLGSC 940
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/535 (38%), Positives = 310/535 (57%), Gaps = 48/535 (8%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S L +C + G Q+HA + + S + + + L+++Y C ++ A +FD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+RN+ WN +I Y NGP A+ ++ +M G+ PD+ T V+ AC++L+A +EG +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH ++R L +D+ +G AL+DMYAKCG
Sbjct: 124 IHKDVIR-SGLESDVFVGAALIDMYAKCG------------------------------- 151
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
V+SAR +F K+ ER+VV WN+++A Y+QNG+ +E+L L R++ + PT TF +
Sbjct: 152 CVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIA 211
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A A+ L G++ H + +HG ES+ V +L+DMY K GSV +FE +
Sbjct: 212 ASADNGLLPQGKELHGYSWRHGF------ESNDKVKTALMDMYAKSGSVNVARSLFELLE 265
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK-PDHVTMIGVLCACSHAGLVEEGR 512
E+ VSWNAMI G A +G+ EAL LFK+M G+ PDH+T +GVL ACSH GL+ EG+
Sbjct: 266 EKRVVSWNAMITGYAMHGHANEALDLFKEMK--GKVLPDHITFVGVLAACSHGGLLNEGK 323
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+F SM + + P HYTCM+DLLG G L+EA LI M ++PDA +WG+LL +CK+
Sbjct: 324 MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKI 383
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H N+ +GE +KL+E+EP + G YV+LSNMYA+ G+W V R+R LM +G+ K CS
Sbjct: 384 HGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACS 443
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP-------NASDDE 680
WIE+ V+ F+ +D HP ++ IY LK + MK GY P + DDE
Sbjct: 444 WIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDE 498
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 213/453 (47%), Gaps = 70/453 (15%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A LL SC+ K++ +++HARI + + + +L+++Y C L A +FD+
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+S +N+F WN M+ G+A + + A+ +
Sbjct: 62 ISKRNLFL-------------------------------WNVMIRGYAWNGPYELAISLY 90
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M +++F L AC+ + G ++H + +S SDV++G+ALIDMY KC
Sbjct: 91 YQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC 150
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G V AR+VFD + ER++V WNS++ Y QNG ++L + M +G++P E T +
Sbjct: 151 GCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISI 210
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+A A +G ++H R ND V AL+DMYAK G +N AR +F+ + + V
Sbjct: 211 AASADNGLLPQGKELHGYSWRHGFESNDKV-KTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS +M++GYA +G EAL LF+ +K +
Sbjct: 270 VSWNAMITGYA-------------------------------MHGHANEALDLFKEMKGK 298
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P H TF +L AC++ L G+ ++ + + + +ID+ C
Sbjct: 299 -VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHY-----TCMIDLLGHC 352
Query: 440 GSVEDGCR-IFETMVERDWVSWNAMIVGCAQNG 471
G +E+ + I E VE D W A++ C +G
Sbjct: 353 GRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHG 385
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 150/291 (51%), Gaps = 34/291 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C ++ + +++H +I+S S++F+ LID+YAKCGC+ AR+VF
Sbjct: 101 DKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVF 160
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK+ ++V W NSM++ ++Q+ + E+L
Sbjct: 161 DKIDERDVVCW-------------------------------NSMLATYSQNGQPDESLA 189
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
M +E +F +++A A + G ++H + + S+ + +AL+DMY
Sbjct: 190 LCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYA 249
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G V+ AR +F+ + E+ +VSWN++IT Y +G A++AL++F + M + PD +T
Sbjct: 250 KSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLF-KEMKGKVLPDHITFVG 308
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEA 307
V++AC+ EG ++H R M + + + ++D+ CG+L EA
Sbjct: 309 VLAACSHGGLLNEG-KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/685 (32%), Positives = 350/685 (51%), Gaps = 92/685 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S+ + LL C+ S+ R VH + K+ +++F+ L++ Y +CG AR
Sbjct: 76 VQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCG---AAR-- 130
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DA RLF MPER+ +W ++V+G+ + + + L
Sbjct: 131 --------------------------DARRLFDGMPERNVVTWTALVTGYTLNSQPALGL 164
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M S Y+ G+ L+AC S D +G QVH K S MG++L +Y
Sbjct: 165 EVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLY 224
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLIT-CYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K G + A R F + E+N+++W ++I+ C E L +F+ M+ G+ P+E TL
Sbjct: 225 AKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTL 284
Query: 256 ASVVSACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
SV+S C + G Q+ A + CE +L + N+ + +Y + G+ +EA +F++
Sbjct: 285 TSVMSLCGTRLDLNLGKQVQAFSFKIGCE---TNLPVKNSTMYLYLRKGETDEAMRLFEQ 341
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ----------- 362
M + ++++WNA+I+GY Q
Sbjct: 342 ME-------------------------------DASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+AL +FR LKR + P +TF ++L+ C+ + L+ G Q H +K G FLS
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG--FLS-- 426
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D+ V ++L++MY KCG ++D + F M R +V+W +MI G +Q+G EA+ LF++
Sbjct: 427 --DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEE 484
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M L G +P+ +T + +L ACS+AGLVEE YF M KE+ + P+ DHY CM+D+ R G
Sbjct: 485 MRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLG 544
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
+++A + I+ +P+ IW SL+A C+ H N+ L Y A KLLE++P Y+LL N
Sbjct: 545 RVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLN 604
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MY RW +V RVRKLM++ V SWI I V F D+ HP E+Y +L+
Sbjct: 605 MYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLEN 664
Query: 663 LTREMKRVGYVP-------NASDDE 680
L + K +GY P ++ DDE
Sbjct: 665 LLEKAKAIGYEPYQNAELSDSEDDE 689
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 328/592 (55%), Gaps = 40/592 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V N +++ K+ + +A R+F+ M +D +WN+M+ G+AQ R ++ F+ M
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ F S S + AC S D ++G VH L S + D + LIDMY KCG +
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ VFD + ++ V+WNSLI Y Q+G + LE F +MM +PD VT ++S +
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFS 433
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
LA +G IH +++ +L++GN+L+D+YAKCG++++ VF M
Sbjct: 434 QLADINQGRGIHCDVIKF-GFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-------- 484
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+++SWN +IA + + ++ E + P
Sbjct: 485 -----------------------AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +L C+ LA + G++ H ++ K SG ES++ +GN+LI+MY KCGS+E
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFK------SGFESNVPIGNALIEMYSKCGSLE 575
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ ++F+ M E+D V+W A+I G G +AL F+ M L G PD V I + ACS
Sbjct: 576 NCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS 635
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H+G+V+EG ++F M ++ L P +HY C+VDLL R+G L +A+ I +MPM+PDA +W
Sbjct: 636 HSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLW 695
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL+AC+ N + + V+KK+LE+ ++G YVL+SN+YA LG+W +V VR M+ +
Sbjct: 696 GALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
G+ K+PG SWIEI V VF DK ++ +L+ L R M + GYV +
Sbjct: 756 GLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVAD 807
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 269/558 (48%), Gaps = 77/558 (13%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
FL SS LL + +K+ R VH+ II S + + +LI YA+
Sbjct: 20 FLRSS----LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQ--------- 66
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
V D +S+ +VF S P + WNS++ + F++A
Sbjct: 67 VKDPISSVSVFRSIS---------------------PTNNVYLWNSIIRALTHNGLFTQA 105
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
LGY+ +M + ++F S +++CA +D ++G VH + + SD+Y+G+ALIDM
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + + AR VF+ M R+ VSWNSLI+ Y NG DAL+++ + +G+ PD T+
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+SV+ AC SL A KEG+ +H + + + D+++GN L+ MY K +L EAR VF +M
Sbjct: 226 SSVLLACGSLMAVKEGVAVHGVIEKI-GIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++ V+ +M+ GYA+ +++ +F M++ V
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV------------------------- 319
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
P + + + AC DLQ+G+ H +++ SG E D N LIDM
Sbjct: 320 -------PDMLSITSTIRACGQSGDLQVGKFVHKYLIG------SGFECDTVACNILIDM 366
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG + +F+T +D V+WN++I G Q+GY E L F KM+ KPD VT
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTF 425
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L S + +GR + K G ++D+ + G +D+ + M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484
Query: 556 MQPDAVIWGSLLAACKVH 573
D + W +++A+ VH
Sbjct: 485 AH-DIISWNTVIAS-SVH 500
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 200/464 (43%), Gaps = 82/464 (17%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C +S + + VH +I S F + N LID+YAKCG L A++VFD K+ T
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
WNS+I +G+ Q + E L F M E
Sbjct: 391 WNSLI-------------------------------NGYTQSGYYKEGLESFKMMKMERK 419
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
S +F LS + D G +H + K + +++ +G++L+D+Y KCG + +
Sbjct: 420 PDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLK 478
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF M +I+SWN++I + ++ M G+ PDE T+ ++ C+ LA
Sbjct: 479 VFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAV 538
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
++G +IH + + +++ +GNAL++MY+KCG L VF M ++VV
Sbjct: 539 RRQGKEIHGYIFK-SGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVV------- 590
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+W ALI+ + GE ++AL F+ ++ V P
Sbjct: 591 ------------------------TWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGS 441
F + AC +H+ +VK GLRF ++D + + +D+ + G
Sbjct: 627 FIAFIFAC-----------SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGL 675
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ +M ++ D W A++ C G A + KK+L
Sbjct: 676 LAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL 719
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL + ++ R +H +IK F +E+ I N L+DVYAKCG + KVF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
MS ++ +WN++I AS D C+ GF +
Sbjct: 481 SYMSAHDIISWNTVI----------------ASSVHFDDCT-----VGFQMIN------- 512
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M +E E + L C+ + G ++H + KS + S+V +G+ALI+MY
Sbjct: 513 ---EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + +VF M+E+++V+W +LI+ + G AL+ F M SG+ PD V +
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ AC+ KEGL+ R+ L + +VD+ A+ G L +A MP++
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 346/647 (53%), Gaps = 73/647 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL C + K+ +HA +K+ S+I + N +I++Y+KCG + AR++FD+
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDE----- 63
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
M +R+ SW++++SG+ Q + AL F +M
Sbjct: 64 --------------------------MSDRNLVSWSAIISGYDQTGQPLLALNLFSQM-- 95
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+EY F S +SACA G QVHA K S ++ +ALI MY KCG +
Sbjct: 96 -RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTD 154
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A V + M E N VS+N+LI + +N +E F M G PD T + ++ C S
Sbjct: 155 ALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTS 214
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
F G+Q+H ++++ L + +GN ++ MY+K + EA VF
Sbjct: 215 YDDFWRGMQLHCQMIKL-NLEDSAFIGNVIITMYSKFNLIEEAEKVF------------- 260
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCP 383
G K E++++SWN L+ ++E AL +FR +L V P
Sbjct: 261 ---GLIK---------------EKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKP 302
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+TF +L ACA LA ++ G+Q H H+++ + + D+ V N+L++MY KCGS++
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIR------TRQYQDVGVSNALVNMYAKCGSIK 356
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ +F +R+ VSWN +I +G G AL F+KM G PD VT +G+L AC+
Sbjct: 357 NSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACN 416
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLVEEG+ YF+SM + +G+ P +H++C++DLLGRAG L EA+ +E +P D +I
Sbjct: 417 HAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIIL 476
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
GSLL+AC++H ++++GE++A +LL+++P + PYVLLSN+YA WG V K+++
Sbjct: 477 GSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYS 536
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
G+ K+PG S I+++G F + D H +EI +KML + V
Sbjct: 537 GLKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWTVSEV 583
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 191/362 (52%), Gaps = 42/362 (11%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+ GS L CA F G +HA K+ SD+ + + +I++Y KCG V ARR+FD M
Sbjct: 5 AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+RN+VSW+++I+ Y+Q G AL +F +M I P+E ASV+SACASL A +GL
Sbjct: 65 SDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGL 121
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA+ ++ + V NAL+ MY KCG +A + + NV+SE
Sbjct: 122 QVHAQSLKLGCVSVSFV-SNALISMYMKCGLCTDA------LLVHNVMSEP--------- 165
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
N VS+NALIAG+ +N + E+ + F++++++ P +TF LL
Sbjct: 166 ----------------NAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLL 209
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
C + D G Q H ++K L E F+GN +I MY K +E+ ++F +
Sbjct: 210 GICTSYDDFWRGMQLHCQMIKLNL------EDSAFIGNVIITMYSKFNLIEEAEKVFGLI 263
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEG 511
E+D +SWN ++ C AL +F+ ML +C KPD T GVL AC+ + G
Sbjct: 264 KEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHG 323
Query: 512 RK 513
++
Sbjct: 324 KQ 325
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 207/460 (45%), Gaps = 86/460 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA ++ +C ++S +VHA+ +K S F+ N LI +Y KCG A V + MS
Sbjct: 104 FASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMS 163
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N ++N++I +GF ++ + + + F
Sbjct: 164 EPNAVSYNALI-------------------------------AGFVENQQPEKGIEAFKV 192
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + FA ++F L C DF G Q+H + K ++G+ +I MY K
Sbjct: 193 MRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNL 252
Query: 202 VSCARRVFDGMRERNIVSWNSLIT--CYEQNGPASDALEVFVRMM-ASGIEPDEVTLASV 258
+ A +VF ++E++++SWN+L+T C+ ++ AL VF M+ ++PD+ T A V
Sbjct: 253 IEEAEKVFGLIKEKDLISWNTLVTACCFCKD--HERALRVFRDMLDVCFVKPDDFTFAGV 310
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
++ACA LA+ + G QIH L+R + + D+ + NALV+MYAKCG + + VF R RN
Sbjct: 311 LAACAGLASIRHGKQIHGHLIRTRQYQ-DVGVSNALVNMYAKCGSIKNSYDVFRRTSDRN 369
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+VSWN +IA + +G AL F +K
Sbjct: 370 -------------------------------LVSWNTIIAAFGNHGLGARALEHFEKMKT 398
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG-LRFLSGEES-DIFVG----NSL 432
+ P TF LL AC H +V+ G + F S EE+ IF + L
Sbjct: 399 VGIHPDSVTFVGLLTAC-----------NHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCL 447
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
ID+ + G +++ E + D + +++ C +G
Sbjct: 448 IDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 30/298 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ LL C ++H ++IK FI N +I +Y+K + A KVF
Sbjct: 201 DRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVF 260
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K++ +WN+++T + A R+F M D C
Sbjct: 261 GLIKEKDLISWNTLVTACCFCKDHERALRVFRDM--LDVC-------------------- 298
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FVK +++F L+ACAG + G Q+H L ++R DV + +AL++MY
Sbjct: 299 -FVKP-------DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYA 350
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + + VF +RN+VSWN++I + +G + ALE F +M GI PD VT
Sbjct: 351 KCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVG 410
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++AC +EG + + ++ + L+D+ + G+L EA +++P
Sbjct: 411 LLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLP 468
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
G+LL+ CA + G H +K G+ SDI V N +I++Y KCG+V R+
Sbjct: 7 GSLLHHCAKIKAFLHGLSLHAAALKTGML------SDIIVSNHVINLYSKCGNVIFARRM 60
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ M +R+ VSW+A+I G Q G AL LF +M + P+ V+ AC+ +
Sbjct: 61 FDEMSDRNLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTAL 117
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+G + + S + G + ++ + + G +A L+ + +P+AV + +L+A
Sbjct: 118 SQGLQ-VHAQSLKLGCVSVSFVSNALISMYMKCGLCTDA-LLVHNVMSEPNAVSYNALIA 175
Query: 569 A 569
Sbjct: 176 G 176
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 13 DLAFL--DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL 70
D+ F+ D FA +L +C S+ +++H +I+++ ++ + N L+++YAKCG +
Sbjct: 296 DVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSI 355
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
+ VF + S++N+ +WN+II + F H
Sbjct: 356 KNSYDVFRRTSDRNLVSWNTII-------------------------------AAFGNHG 384
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSAC-------AGSVDFKMGTQVHALLSKSRYS 183
+ AL +F KM + +F L+AC G V F + + + +
Sbjct: 385 LGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHF 444
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGM 212
S LID+ G+ GR+ A + +
Sbjct: 445 ------SCLIDLLGRAGRLQEAEEYMEKL 467
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 309/508 (60%), Gaps = 9/508 (1%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
++HA + KS + + + L+D YGKC + A +FD M +R+ VSW S++T Y Q
Sbjct: 23 KIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQAK 82
Query: 232 PASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+ L +F M + ++PD A+++ ACASL + + G Q+HAR + + +D+V
Sbjct: 83 LPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVV- 141
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
++LVDMYAKCG + AR VFD + ++ VS T+M+SGYA++ A +F + RN+
Sbjct: 142 KSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNL 201
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNLLNACANLADLQLGRQAHT 409
SW ALI+G Q+G + +F ++RE V +++ ACANLA L LG+Q H
Sbjct: 202 YSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIH- 260
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
GL SG ES +F+ N+L+DMY KC + +F M+ RD VSW ++IVG AQ
Sbjct: 261 -----GLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQ 315
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
+G EAL L+ +M+L KP+ VT +G++ ACSHAGLV +GRK F +M +++ ++P
Sbjct: 316 HGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQ 375
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
+TC +DLL R+G L+EA+ LI+ MP +PD W +LL+ACK H N +G +A +LL +
Sbjct: 376 LFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSL 435
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
YVLLSN+YA G+W ++ RVRKLM V ++PG S I++ VF +
Sbjct: 436 NMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETC 495
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP+ EI+ +LK L EM++ GY+P+ S
Sbjct: 496 HPMKDEIFGLLKELDAEMRKRGYIPDTS 523
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 163/299 (54%), Gaps = 1/299 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +A LL +C S+ ++VHAR + S F + +++ L+D+YAKCG AR VF
Sbjct: 103 DHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVF 162
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + K +W ++++G + G D+A LF P R+ SW +++SG Q +
Sbjct: 163 DSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCY 222
Query: 138 YFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F++M E + + S + ACA +G Q+H L+ S Y S +++ +AL+DMY
Sbjct: 223 MFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMY 282
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC + AR VF+ M R++VSW S+I Q+G A +AL+++ +M+ + I+P+EVT
Sbjct: 283 AKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFV 342
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++ AC+ +G ++ ++ ++ L L +D+ ++ G LNEA + MP
Sbjct: 343 GLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMP 401
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 216/524 (41%), Gaps = 145/524 (27%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C + ++ + +++HA+I+KS + N L+D Y KC L
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLL--------------- 53
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-S 144
DA LF MP+RD SW S+++ + Q ++ L F M +
Sbjct: 54 ----------------QDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTT 97
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ + + + L ACA ++G QVHA S + D + S+L+DMY KCG S
Sbjct: 98 DRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSI 157
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR---------------------- 242
AR VFD + + VSW ++++ Y ++G +A+E+F+R
Sbjct: 158 ARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYC 217
Query: 243 ---------MMASGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
M G++ D + L+SVV ACA+LA G QIH L+ + L + N
Sbjct: 218 IDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHG-LVIGSGYESCLFISN 276
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
ALVDMYAKC + AR VF+RM R+VVS TS++ G A
Sbjct: 277 ALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAA---------------------- 314
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
Q+G +EAL L+ + + P TF L+ AC++
Sbjct: 315 ---------QHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSH--------------- 350
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC----- 467
G V G ++F+ M+E +S + + C
Sbjct: 351 --------------------------AGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLL 384
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+++G+ EA L K M KPD T +L AC H G E G
Sbjct: 385 SRSGHLNEAEDLIKTM---PHKPDEPTWAALLSACKHHGNTEMG 425
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++H +I S + S +FI N L+D+YAKC + AR VF++M +++V +W SII G
Sbjct: 257 KQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGA--- 313
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
AQH R EAL + +M +E +F +
Sbjct: 314 ----------------------------AQHGRAKEALDLYDQMVLAEIKPNEVTFVGLI 345
Query: 159 SACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-N 216
AC+ + G ++ A++ R S + + + +D+ + G ++ A + M + +
Sbjct: 346 YACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPD 405
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVSACA 263
+W +L++ + +G + + R+++ + EP L S V A A
Sbjct: 406 EPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGA 453
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 328/616 (53%), Gaps = 73/616 (11%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C+RS RR+H ++K+ ++ F+ N L+D+YAK G L
Sbjct: 130 LKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDL--------------- 173
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
++A ++F +PER+ SW SM+SG Q+ E L F +M +
Sbjct: 174 ----------------ENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQD 217
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N SEY+ S L+ACA G +H + K S++ ++ ++L+DMY KC +V A
Sbjct: 218 NVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDA 277
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
RRVFD + +IV W ++I Y QN DAL++F+ I P+ VT+A+V+SA A L
Sbjct: 278 RRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQL 337
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
G +HA ++ + +D+V NALVDMYAKC L EA +
Sbjct: 338 RHLPLGRSVHAIGVKLGTMESDVVR-NALVDMYAKCQALPEANSI--------------- 381
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
F ++L ++VV+WN+++AGY++NG E+L LF ++ + + P
Sbjct: 382 ----------------FGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDA 425
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+ N L+AC LADL +G+ HT+ +K+ S+I+V +L+++Y KC +
Sbjct: 426 ISVVNALSACVCLADLHIGKGFHTYAIKYAFM------SNIYVNTALLNLYSKCADLPSA 479
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
R+F M +R+ V+W+AMI G G ++ LF +ML P+ V +L ACSH
Sbjct: 480 QRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHT 539
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G+V G++YF SM++ + P HY CMVD++ RAG L+EA I+ MP++ +WGS
Sbjct: 540 GMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGS 599
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
L CK+H + GE KK+ + P YVL+SN+Y GRW + +R+ M+++G+
Sbjct: 600 FLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGL 659
Query: 626 VKQPGCSWIEILGHVN 641
VK PGCS + GH N
Sbjct: 660 VKLPGCSSV---GHEN 672
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 265/566 (46%), Gaps = 79/566 (13%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNR--LIDV 63
SV+ + A D+S LL +C +S+ R +H R++ I+ R L+
Sbjct: 8 SVEHLARASAPRDASALVLLLPACGTLRSL---RALHGRLLLLTSGLLRGIRARTKLLSC 64
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
YA G L AR V D + + + ++ L+ G DA L M R +
Sbjct: 65 YAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAA----- 119
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
A ++ AL AC S DF+ G ++H + K+
Sbjct: 120 ------------------------AQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-G 154
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+D ++ ++L+DMY K G + AR+VFD + ERN+VSW S+++ QNG A + L +F M
Sbjct: 155 ADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEM 214
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ P E T+ SV++ACA L +G IH +++ L + + +L+DMYAKC K
Sbjct: 215 RQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIK-YGLSTNSFISASLLDMYAKCEK 273
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ +AR VFD + ++V T+M I GYTQN
Sbjct: 274 VEDARRVFDELEFVDIVLWTAM-------------------------------IVGYTQN 302
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
+AL LF K S+ P T +++A A L L LGR H VK L E
Sbjct: 303 KRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVK-----LGTME 357
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
SD+ V N+L+DMY KC ++ + IF ++ +D V+WN+M+ G ++NG E+L LF +M
Sbjct: 358 SDV-VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRM 416
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRA 541
+ G PD ++++ L AC + G+ + + K A + + Y T +++L +
Sbjct: 417 RMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIK---YAFMSNIYVNTALLNLYSKC 473
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLL 567
L A+ + M ++V W +++
Sbjct: 474 ADLPSAQRVFNDM-TDRNSVTWSAMI 498
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 151/315 (47%), Gaps = 23/315 (7%)
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRN------VVSETSMVSGYAKASSVKSARLMFTK 344
+ALV + CG L R + R+ + + + T ++S YA + SAR +
Sbjct: 21 ASALVLLLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDG 80
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT----HYTFGNLLNACANLAD 400
+ ++ ++ G + +A+ L R ++R CP L AC AD
Sbjct: 81 TPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRR--CPAAAQADVVLSLALKACVRSAD 138
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+ GR+ H VVK G +D FV NSL+DMY K G +E+ ++F+ + ER+ VSW
Sbjct: 139 FRYGRRLHCDVVKAG-------GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSW 191
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
+M+ G QNG E L LF +M P TM+ VL AC+ G + +GR S+ K
Sbjct: 192 TSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIK 251
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM--L 578
+GL+ ++D+ + +++A+ + + + D V+W +++ ++ + L
Sbjct: 252 -YGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFV-DIVLWTAMIVGYTQNKRPLDAL 309
Query: 579 GEYVAKKLLEIEPSN 593
++ KK + I P++
Sbjct: 310 QLFLHKKFVSIVPNS 324
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 31/145 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ L +C+ + + H IK F S I++ L+++Y+KC L A++VF
Sbjct: 424 DAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVF 483
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M+++N T W++M+ G+ + ++
Sbjct: 484 NDMTDRNSVT-------------------------------WSAMIGGYGMQGDSAGSID 512
Query: 138 YFVKMHSENFALSEYSFGSALSACA 162
F +M EN +E F S LSAC+
Sbjct: 513 LFNEMLKENIHPNEVVFTSILSACS 537
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/646 (32%), Positives = 350/646 (54%), Gaps = 43/646 (6%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
KS+S +++H II F I +L+ Y FD +++ + T NS
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTN----------FDLLADAHTITENS-- 154
Query: 93 TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEY 152
+ +P WN ++S + ++ EAL + +M + ++
Sbjct: 155 -------------NILHPLP------WNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKF 195
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
++ S L AC +D G ++HA ++ S ++++ ++L+ MY K G +S AR +F+ M
Sbjct: 196 TYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENM 255
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
ER+ VSWN++I+ Y G +A E+F +M GIE + +T ++ C F+E L
Sbjct: 256 LERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEAL 315
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS-----ETSMVS 327
++ + MR + D V + + G + R + IR+ + ++++
Sbjct: 316 ELLSH-MRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGS-AIRSFYDGVDNVKNALIT 373
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
Y++ ++ A +F +N+++WN++++GYT +EEA LFR + + P + T
Sbjct: 374 MYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVT 433
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
++L CA +A+LQ G++ H ++++ +G + + + NSL+DMY + G V + R
Sbjct: 434 IASILPLCARVANLQHGKEFHCYILRR-----AGFKDYLLLWNSLVDMYARSGKVLEAKR 488
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+++ RD V++ ++I G G G EAL LF +M KPDHVTM+ VL ACSH+GL
Sbjct: 489 LFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGL 548
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V EG K F M +G+ P +H+ CMVDL GRAG L +AK +I MP +P + +W +LL
Sbjct: 549 VTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLL 608
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC++H N +GE+ A+KLLE+ P NSG YVL++NMYA G W ++ +VR MR GV K
Sbjct: 609 GACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRK 668
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
PGC+W+++ F+V D P ++Y +L+ LT MK YV
Sbjct: 669 APGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDAEYV 714
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 208/404 (51%), Gaps = 15/404 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C ++ +++HA I S +F+ N L+ +YAK G L AR +F
Sbjct: 193 DKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLF 252
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+ M ++ +WN++I+G G +A LF M E + +WN++ G Q F
Sbjct: 253 ENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFE 312
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EAL M S + + L AC+ K+G ++H +S Y + +ALI
Sbjct: 313 EALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALI 372
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +C + A +F R +NI++WNS+++ Y + +A +F M+ SGIEP+ V
Sbjct: 373 TMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYV 432
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+AS++ CA +A + G + H ++R ++ L+L N+LVDMYA+ GK+ EA+ +FD
Sbjct: 433 TIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDS 492
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEA 369
+ R+ V+ TS+++GY + A +F +M +R++ V+ A+++ + +G E
Sbjct: 493 ISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEG 552
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+ LF L+ P+ Y L A + DL GR H K
Sbjct: 553 IKLFELM------PSAYGIIPRLEHFACMVDL-FGRAGLLHKAK 589
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/650 (34%), Positives = 339/650 (52%), Gaps = 81/650 (12%)
Query: 88 WNSIITGL-LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN 146
WN ++T + + A RLF +P D SWNS+++ A MH
Sbjct: 37 WNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERG 96
Query: 147 FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCAR 206
A + ++ GSAL + A +GTQ+H+L K+ + +V+ +AL+ MY KCGR A
Sbjct: 97 LAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDAC 156
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
R+FDGM ERN VSWN+L+ Y ++G + A+++FV M G PDE T A++++
Sbjct: 157 RLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDST 216
Query: 267 AFKEGLQIHARLMR-------------------CEKL------------RNDLVLGNALV 295
F Q+H ++++ C L R+DL+ NA++
Sbjct: 217 CFLMH-QLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAML 275
Query: 296 DMYAKCGKLNEARCVFDRM-------P----------------------IRNVVSET--- 323
YA G +EA F M P I +VS+
Sbjct: 276 GAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRDHGGTVIHGLVSKNGFE 335
Query: 324 ----------SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+M + +++ ++ A F +L ++ VSWN+++ GY+Q+G + +AL F
Sbjct: 336 GVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFF 395
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R ++ E++ Y F L +C++LA L+LGRQ H GL SG S+ FV +SLI
Sbjct: 396 RCMQSENITTDEYAFSAALRSCSDLALLRLGRQIH------GLVIRSGFASNNFVSSSLI 449
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY K G ++D + FE + V WN+M+ G AQ+G LF +ML DH+
Sbjct: 450 FMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHI 509
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T +G++ ACSHAGLV+EG + ++M +G+ +HY C +DL GRAG LD+AK LI++
Sbjct: 510 TFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDS 569
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP +PDA++W +LL AC+VH N+ L VA LLE EP YVLLSNMY+ LG W +
Sbjct: 570 MPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDR 629
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
V+K M+ +G+ K PG SWIE+ V+ F +D HP EIY +L +L
Sbjct: 630 AIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLSLL 679
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 35/210 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ L SC + R++H +I+S FAS F+ + LI +Y+K G L A K F
Sbjct: 406 DEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSF 465
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + WN SM+ G+AQH +
Sbjct: 466 EEADKSSSVPWN-------------------------------SMMFGYAQHGKAQAVRS 494
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDM 195
F +M L +F ++AC+ + G+++ + +SRY + M + ID+
Sbjct: 495 LFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTM-ESRYGIPLRMEHYACGIDL 553
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
YG+ G++ A+ + D M E + + W +L+
Sbjct: 554 YGRAGQLDKAKELIDSMPFEPDAMVWMTLL 583
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 358/659 (54%), Gaps = 63/659 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++ ++ ++ + ++ +C V+D R + + A + F ++ YA+
Sbjct: 62 RRLFDEIPRRNTVSWNAMIAACSDHGRVADARD----LFDAMPARDGFSWTLMVSCYARA 117
Query: 68 GCLYGARKVFDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G L AR D+M +K +N++I+G K G DDA L MP D SWNS++ G
Sbjct: 118 GELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGL 177
Query: 127 AQHDRFSEALGYFVKMH-----SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
++ A+ +F +M S N L Y AG VD G L
Sbjct: 178 TRNGEMVRAVKFFDEMPARDMVSWNLMLEGY-------VRAGDVDSAAG------LFAGV 224
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
S +V L++ Y + GR+ AR +FD + +RN+ +WN +++ Y + +A ++F
Sbjct: 225 PSPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFT 284
Query: 242 RMMASGIEPDE--VTLASVVSACASLAAFKEGLQI------------------------- 274
M PD+ ++ +++SA +E +
Sbjct: 285 EM------PDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMI 338
Query: 275 -HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
ARL+ D V N ++ Y CG L+EA +F +MP +++VS +M++GYA
Sbjct: 339 DDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDG 398
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
++ A +F KM +RN VSWN++I+G+ QNG EAL F L++R++ T+ L+
Sbjct: 399 QMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLS 458
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
ACA+LA L +GRQ H+ + + SG D F GN+LI Y KCG + + ++F+ M
Sbjct: 459 ACADLAALHVGRQFHSLLAR------SGYIGDSFAGNALISAYAKCGRILEARQVFDEMP 512
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
D VSWNA+I G A NG+GTEA+ +F++M +PD VT +GVL ACSHAGL++EG
Sbjct: 513 APDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFD 572
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+F+SM+K++ L P+ +HY CMVDLLGR+G L EA +I+ M +QP+A +WG++L AC+VH
Sbjct: 573 FFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVH 632
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
+N L + A+KL E+EP + YVLLSN+ AE G+W E +R +++RGV K PG +
Sbjct: 633 KNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGLA 691
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 252/555 (45%), Gaps = 83/555 (14%)
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
++ N+ + A+ G L AR++FD M ++N ++N++++ L + G I DA RLF +P
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-----FALSEYSFGSALSACAGSVDFK 168
R+ SWN+M++ + H R ++A F M + + +S Y+ L ++D
Sbjct: 71 RNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRM 130
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
G + A +A+I Y K GR A + M +I+SWNS++
Sbjct: 131 PGDKCTACY------------NAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLT 178
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSA--CASLAAFKEGLQIHARLMRCEKLRN 286
+NG A++ F M A + + L V A S A G+
Sbjct: 179 RNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVP-----------SP 227
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++V L++ Y + G++ EAR +FDR+P RNV + M+SGY + S ++ A +FT+M
Sbjct: 228 NVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMP 287
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGR 405
++N +SW +I+ + G+ +EA L + +S T G L + + A L
Sbjct: 288 DKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARL---- 343
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
+ GL E D N++I Y+ CG +++ +F+ M +D VSWN MI
Sbjct: 344 ------IFDGL-----EVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIA 392
Query: 466 GCAQNGYGTEALGLFKKML------------------LCGEKPDHVTMIG---------- 497
G A +G +A+G+F+KM LC E H ++
Sbjct: 393 GYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWST 452
Query: 498 ---VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIE 552
L AC+ + GR++ S +++ + D + ++ + G + EA+ + +
Sbjct: 453 YACCLSACADLAALHVGRQFHSLLARS---GYIGDSFAGNALISAYAKCGRILEARQVFD 509
Query: 553 AMPMQPDAVIWGSLL 567
MP PD V W +L+
Sbjct: 510 EMP-APDIVSWNALI 523
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L + +G + R+ F SM + ++ Y M+ L R G + +A+ L + +P +
Sbjct: 18 LTRLARSGQLAAARRLFDSMPSRNTVS-----YNAMLSALARHGRIADARRLFDEIPRR- 71
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG-PYVLLSNMYAELGRWG 611
+ V W +++AAC H + A+ L + P+ G + L+ + YA G G
Sbjct: 72 NTVSWNAMIAACSDHGRVA----DARDLFDAMPARDGFSWTLMVSCYARAGELG 121
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/531 (38%), Positives = 312/531 (58%), Gaps = 13/531 (2%)
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM--YGKCGRVSCAR 206
L +Y LS+C D TQ+HA + SD ++ S ++ G + AR
Sbjct: 33 LCKYPILRHLSSCKTLKDL---TQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYAR 89
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASL 265
+F +R+ +I N+LI Y + DA+ + M S + PD T ++ AC+ +
Sbjct: 90 FLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEI 149
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+ + G IH+ + + +++ + N LV MYA CG + A VFDR P + S M
Sbjct: 150 PSLRLGEAIHSHVFKL-GWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIM 208
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
+ GY K KSAR MF M +R+VVSW+ +I GY Q +E LGLF+ + E + P
Sbjct: 209 IGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNE 268
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
N L+ACA+L ++ G+ ++ + +R + +G +LIDMY KCGSVE
Sbjct: 269 SVLVNALSACAHLGAMEQGQWIERYMERKNVRL------TVRLGTALIDMYSKCGSVERA 322
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+F M E++ ++W+AMI G A NG G +AL LF +M + G KP+ VT IG+L ACSH+
Sbjct: 323 LEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHS 382
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
LV+EG +F SM+ +GL P H+ CMVDL GRAG LD+A+T+I++MP +P++ IWG+
Sbjct: 383 KLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGA 442
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC++H + LGE V K+LLE++P++ G YVLLSN+YA GRW V +R++MR+R V
Sbjct: 443 LLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQV 502
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
K PGCS+I++ ++ F+ D HP + IY L +++E+K GY P+
Sbjct: 503 SKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDT 553
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 161/304 (52%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ F D F LL +C S+ +H+ + K ++SE+ + N L+ +YA CG + A
Sbjct: 131 VVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESA 190
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
VFD+ + +WN +I G LK G A R+F +MP+RD SW+ M++G+ Q RF
Sbjct: 191 GLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFK 250
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
E LG F M E +E +ALSACA + G + + + V +G+ALI
Sbjct: 251 EGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALI 310
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCG V A VF M+E+N+++W+++I NG DAL +F +M G++P+EV
Sbjct: 311 DMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEV 370
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +++AC+ EG + L+ + +VD+Y + G L++A+ V
Sbjct: 371 TFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKS 430
Query: 314 MPIR 317
MP +
Sbjct: 431 MPFK 434
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 39/210 (18%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
LID+Y+KCG + A +VF KM KNV W+++I GL
Sbjct: 309 LIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGL------------------------ 344
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLS 178
A + + +AL F +M + +E +F L+AC+ S G H++ S
Sbjct: 345 -------AINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTS 397
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDAL 237
+ + ++D+YG+ G + A+ V M + N W +L+ +G
Sbjct: 398 IYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGE 457
Query: 238 EVFVRMMASGIEPDE----VTLASVVSACA 263
+V R++ ++P+ V L+++ +AC
Sbjct: 458 QVGKRLLE--LDPNHGGRYVLLSNIYAACG 485
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 349/653 (53%), Gaps = 70/653 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C V RR+H ++K+ ++F+ + L+++YAKC
Sbjct: 105 DFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCD--------- 155
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F+D A +LF P+RD WN+++S + + + AL
Sbjct: 156 ---------------------QFVD-AIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALK 193
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F KM F + +F +S+C ++ + G +VH L + R D ++ SAL+DMYG
Sbjct: 194 TFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYG 253
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A+ VF+ + +N ++WN++IT Y G + +E+ +RM G +P +TL S
Sbjct: 254 KCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTS 313
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ A + + G IH ++R ++ D+ + +L+D Y KCG
Sbjct: 314 IIYASSRSVQLRHGKFIHGYILR-NRIDVDIFIDVSLIDFYFKCG--------------- 357
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V SA +F + + VVSWN +I+G+ G + +AL ++ +K
Sbjct: 358 ----------------YVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMK 401
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
V P TF + L+AC+ LA L GR+ H ++ H L E ++I +G +L+DMY
Sbjct: 402 EHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKL-----EANEIVMG-ALLDMYA 455
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG V++ ++F + +RD VSW +MI +G +EAL LF +M + D VT +
Sbjct: 456 KCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLA 515
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE-AMPM 556
VL ACSHAGLV+EG YF+ M ++ + P +HY+C++DLLGRAG L EA +++ +
Sbjct: 516 VLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKET 575
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ D + +L +AC +H N +LG + K L+E++P + Y+LLSNMYA + +W EV +V
Sbjct: 576 RSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKV 635
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
R+ M++ G+ K PGCSWIEI ++ F +DK +PL +Y L +L M++
Sbjct: 636 RRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHMEK 688
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 201/430 (46%), Gaps = 49/430 (11%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-E 214
SAL C S K G +H + + S++ + +LI Y C + A VF
Sbjct: 8 SALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCP 67
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQ 273
++ WN+L++ Y N +AL++F ++ S + PD T V+ AC L G +
Sbjct: 68 LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRR 127
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH L++ L D+ +G++L++MYAKC + +A
Sbjct: 128 IHNHLLK-TGLIWDVFVGSSLMNMYAKCDQFVDA-------------------------- 160
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
+K +F + +R+V WNA+I+ Y ++G+ E AL F +K P TF +++
Sbjct: 161 -IK----LFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVS 215
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
+C L +L+ G++ H +++ + D FV ++L+DMY KCG +E +FE +
Sbjct: 216 SCTRLLNLERGKEVHRELIERRILL------DAFVLSALVDMYGKCGCLEMAKEVFEKIP 269
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++ ++WNAMI G + G + L +M G KP +T+ ++ A S + + G+
Sbjct: 270 RKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKF 329
Query: 514 YFSSMSKEH-GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ + + D ++D + G + A+T+ + + + V W +++
Sbjct: 330 IHGYILRNRIDVDIFID--VSLIDFYFKCGYVSSAETIFRTIS-KNEVVSWNVMISG--- 383
Query: 573 HRNIMLGEYV 582
++M+G ++
Sbjct: 384 --HVMVGNHI 391
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 152/322 (47%), Gaps = 44/322 (13%)
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D VTL S + C S K+G IH R+ C ++++VL +L+ Y C A V
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSC-GFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F T +V WNAL++ YT N EAL
Sbjct: 61 FQ------------------------------TNDCPLDVSLWNALLSAYTNNFRFVEAL 90
Query: 371 GLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
LF L S V P YT+ +L AC L + GR+ H H++K GL + D+FVG
Sbjct: 91 QLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIW------DVFVG 144
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+SL++MY KC D ++F+ +RD WNA+I ++G AL F KM G +
Sbjct: 145 SSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFE 204
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEA 547
P+ VT V+ +C+ +E G++ + + L D + + +VD+ G+ GCL+ A
Sbjct: 205 PNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL---DAFVLSALVDMYGKCGCLEMA 261
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
K + E +P + +A+ W +++
Sbjct: 262 KEVFEKIP-RKNAITWNAMITG 282
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/686 (31%), Positives = 362/686 (52%), Gaps = 43/686 (6%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
QR+++ ++ A +D + L+ R + ++HARI+ A + F+ ++LI
Sbjct: 8 QRALQGLLNKAA-VDGGAYGHLIQHFTRHRLPLHALQLHARIVVFSIAPDNFLASKLISF 66
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW---N 120
Y + + A VFD+++ +N F++N+++ DA LF SW +
Sbjct: 67 YTRQNRFHQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--------LSWIGSS 118
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT---QVHALL 177
SG A+ D S L A +G DF +G+ QVH +
Sbjct: 119 CYSSGAARPDSI--------------------SISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ SDV++G+ LI Y KC + AR+VFD M +R++VSWNS+I+ Y Q+G D
Sbjct: 159 IRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCK 218
Query: 238 EVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++ M+ S +P+EVT+ SV+ AC + G+++H +++ ++ DL L NA++
Sbjct: 219 KLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIE-NHIQMDLSLCNAVIG 277
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
YAKCG L+ AR +FD M ++ V+ +++SGY VK A +F++M + +WNA+
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAV 337
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+G QN +EE + FR + R P T +LL + ++L+ G++ H +++
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN-- 395
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
G +++I+V S+ID Y K G + R+F+ +R + W A+I A +G A
Sbjct: 396 ----GSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSA 451
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
LF +M G KPD+VT+ VL A +H+G ++ + F SM ++ + P +HY CMV
Sbjct: 452 CSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVS 511
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
+L RAG L A I MP++P A +WG+LL V ++ + + +L E+EP N+G
Sbjct: 512 VLSRAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGN 571
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
Y +++N+Y + GRW E VR M++ G+ K PG SWIE + F+ KD +KE+
Sbjct: 572 YTIMANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCERSKEM 631
Query: 657 YLVLKMLTREMKRVGYVPNASDDEAY 682
Y +++ L M Y+ DEAY
Sbjct: 632 YDIIEGLVESMSDKEYIMKQELDEAY 657
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/562 (39%), Positives = 328/562 (58%), Gaps = 24/562 (4%)
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG------TQVH 174
+M+ GF + + ALG F ++ + +F A+ A A + + + G +H
Sbjct: 106 TMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIH 165
Query: 175 -ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
A L V +G+AL+ Y + A +VFD M ER++VSW +L+ Y + G A
Sbjct: 166 CAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLA 225
Query: 234 SDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+A +F RM+ G+ P+ VTL + VSA + G+ +H + R+ + L N
Sbjct: 226 DEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARS-VNLDN 284
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
ALVDM+ KCG + AR VFD M +++V S TSMV+ YAK ++SA +F M RNVVS
Sbjct: 285 ALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVS 344
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W+ +IA Y+Q + EEA+ LFR + V P T ++L+ACA L L LGR + + +
Sbjct: 345 WSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYI 404
Query: 413 ---KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
K GL + +GN+LIDM+ KCG V + ++F+ M ER+ VSWN MI+ A
Sbjct: 405 VSNKIGL--------TVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAV 456
Query: 470 NGYGTEALGLFKKMLLCGEK--PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+G EA+ LF++ L GE PD +T +G+L +CSH+GLV EGR+YF M + + P
Sbjct: 457 HGQSEEAIRLFEQ--LKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPR 514
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CM+DLLG+ G L+EA + MPM+ D WG+LL AC++H N+ +G VA KL+
Sbjct: 515 VEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLV 574
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++PS+SG YVL+S +YA +W +V +R MR RGV K PGCS IE+ G + F+V D
Sbjct: 575 ELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVAD 634
Query: 648 KRHPLNKEIYLVLKMLTREMKR 669
H ++EIY LK + +K+
Sbjct: 635 VSHACSEEIYSALKNIYFHLKQ 656
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 196/430 (45%), Gaps = 85/430 (19%)
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V N+++ +DDA ++F MPERD SW ++V G+A+ EA F +M
Sbjct: 176 ESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM 235
Query: 143 -HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ + +A+SA G +H +++ + V + +AL+DM+GKCG
Sbjct: 236 VVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGC 295
Query: 202 VSCARRVFDGMR-------------------------------ERNIVSWNSLITCYEQN 230
V AR VFDGM RN+VSW+ +I Y Q
Sbjct: 296 VRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQL 355
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+A+ +F M+A+G++P + TL SV+SACA L G I+ + K+ + L
Sbjct: 356 NQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNL 415
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GNAL+DM+AKCG + EA +FD M RNVVS +M+ +A
Sbjct: 416 GNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHA-------------------- 455
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+G++EEA+ LF LK E++ P TF LL +C +H+
Sbjct: 456 -----------VHGQSEEAIRLFEQLKGENIVPDQITFLGLLASC-----------SHSG 493
Query: 411 VVKHGLRFLSGEESDIFVG--------NSLIDMYMKCGSVEDGCRIFETM-VERDWVSWN 461
+V G R+ +E ++F +ID+ K G +E+ + M +E D W
Sbjct: 494 LVSEGRRYF--KEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWG 551
Query: 462 AMIVGCAQNG 471
A++ C +G
Sbjct: 552 ALLNACRMHG 561
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 153/277 (55%), Gaps = 1/277 (0%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+H + + A + + N L+D++ KCGC+ AR+VFD M K+V++W S++ K G
Sbjct: 267 LHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGD 326
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++ A +LF MP R+ SW+ M++ ++Q ++ EA+ F +M + + + S LSA
Sbjct: 327 LESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSA 386
Query: 161 CAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
CA +G ++ + ++ V +G+ALIDM+ KCG V A ++FD M ERN+VS
Sbjct: 387 CAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVS 446
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WN++I + +G + +A+ +F ++ I PD++T ++++C+ EG + +
Sbjct: 447 WNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEME 506
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ + ++D+ K G L EA V MP+
Sbjct: 507 MFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPM 543
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 316/545 (57%), Gaps = 49/545 (8%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGR-----VSCARRVFDGMRERNIVSWNSLI-T 225
Q HAL+ ++ + D Y+ +L+ Y + RVFD +R+ N+ WN +I
Sbjct: 52 QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 111
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--------- 276
C E N P A+ ++ MM + P++ T +V+ AC+ EG+Q+HA
Sbjct: 112 CIENNEPFK-AILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170
Query: 277 ----------------RLMRCEKLRND------LVLGNALVDMYAKCGKLNEARCVFDRM 314
RL+ ++ +D V NA++D Y + G++ AR +F+ M
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230
Query: 315 PIRNVVSE-TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
P R+++S +M+SG+++ V+ AR F +M ER+ +SW+A+I GY Q G EAL +F
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+++E + P + ++L+ACANL L GR HT+ ++ ++ D +G SL+
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL------DGVLGTSLV 344
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG ++ +FE M ++ SWNAMI G A +G +A+ LF KM + P+ +
Sbjct: 345 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI---NPNEI 401
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T +GVL AC+H GLV++G F+SM KE+G+ P +HY C+VDLLGRAG L EA+ ++ +
Sbjct: 402 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 461
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
+P +P +WG+LL AC+ H N+ LGE V K LLE+EP NSG Y LLSN+YA+ GRW EV
Sbjct: 462 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 521
Query: 614 VRVRKLMRKRGVVKQPGCSWIEI-LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
VRKLM++RG+ PG S I++ G V+ F++ D HP K+IY +L + ++ GY
Sbjct: 522 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 581
Query: 673 VPNAS 677
P+ S
Sbjct: 582 EPDPS 586
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 182/367 (49%), Gaps = 11/367 (2%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEI--FIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+L S +R + S R V AR I E+ N +ID Y + G + AR++F+ M +
Sbjct: 174 ILSSAIRMYA-SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPD 232
Query: 83 KNVF-TWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ TWN++I+G + G ++ A F M ERD+ SW++M+ G+ Q F EAL F +
Sbjct: 233 RSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQ 292
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E ++ S LSACA G +H ++ D +G++L+DMY KCGR
Sbjct: 293 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 352
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF+ M + + SWN++I +G A DA+++F +M I P+E+T V++A
Sbjct: 353 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNA 409
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA ++GL I + + + + +VD+ + G L EA V +P +
Sbjct: 410 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPA 469
Query: 322 E-TSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++ K +V+ + +LE +N + L Y + G EE + +L+K
Sbjct: 470 VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMK 529
Query: 378 RESVCPT 384
+ T
Sbjct: 530 ERGIKTT 536
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 208/527 (39%), Gaps = 142/527 (26%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-----LYGARKVFDKMSNKNVF 86
+ S+ ++ HA I+++ + +I L+ YA + +VFD + NVF
Sbjct: 44 TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVF 103
Query: 87 TWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN 146
WN +I ++ ++ F L Y+ +M +
Sbjct: 104 LWNCMIKVCIE------------------------------NNEPFKAILLYY-EMMVAH 132
Query: 147 FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----- 201
F ++Y++ + L AC+ + G QVHA L K D ++ S+ I MY GR
Sbjct: 133 FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEAR 192
Query: 202 ---------------------------VSCARRVFDGMRERNIV---------------- 218
V AR +F+GM +R+++
Sbjct: 193 RILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMV 252
Query: 219 ----------------SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
SW+++I Y Q G +ALE+F +M I P + L SV+SAC
Sbjct: 253 EVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A+L A +G IH R ++ D VLG +LVDMYAKCG+++ A VF++M + V S
Sbjct: 313 ANLGALDQGRWIHTYAKR-NSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSW 371
Query: 323 TSMVSGYAKASSVKSARLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-- 379
+M+ G A + A +F+KM + N +++ ++ G ++ L +F +++E
Sbjct: 372 NAMIGGLAMHGRAEDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431
Query: 380 -------------------------------SVCPTHYTFGNLLNACANLADLQLGRQAH 408
PT +G LL AC +++LG +
Sbjct: 432 VEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV- 490
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
G L E + L ++Y K G E+ + + M ER
Sbjct: 491 ------GKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKER 531
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG-----SVEDGCRI 448
A +L + Q H H L +G D ++ SL+ Y S E R+
Sbjct: 34 AILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRV 93
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + + + WN MI C +N +A+ L+ +M++ +P+ T VL ACS AG+V
Sbjct: 94 FDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVV 153
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG + + + K HGL + + + G L EA+ +++ + DAV W +++
Sbjct: 154 AEGVQVHAHLVK-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 212
Query: 569 ACKVHRNIMLGEY-VAKKLLEIEPSNS 594
+ GE A++L E P S
Sbjct: 213 GY-----LRFGEVEAARELFEGMPDRS 234
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/512 (38%), Positives = 302/512 (58%), Gaps = 10/512 (1%)
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
+ ++HA + K+ + + + L++ YGKCG + A ++FD + R+ V+W SL+T
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF--KEGLQIHARLMRCEKLRN 286
+ AL + ++++G PD AS+V ACA+L K+G Q+HAR +
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFF-LSPFSD 139
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D V+ ++L+DMYAK G + R VFD + N +S T+M+SGYA++ A +F +
Sbjct: 140 DDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTP 199
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH-YTFGNLLNACANLADLQLGR 405
RN+ +W ALI+G Q+G +A LF ++ E + T +++ ACANLA +LG+
Sbjct: 200 YRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
Q H G+ G ES +F+ N+LIDMY KC + IF M +D VSW ++IV
Sbjct: 260 QMH------GVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIV 313
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G AQ+G EAL L+ +M+L G KP+ VT +G++ ACSHAGLV +GR F +M ++HG++
Sbjct: 314 GTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGIS 373
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P HYTC++DL R+G LDEA+ LI MP+ PD W +LL++CK H N + +A
Sbjct: 374 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADH 433
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
LL ++P + Y+LLSN+YA G W +V +VRKLM K PG S I++ +VF
Sbjct: 434 LLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYA 493
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ HP+ EI +++ L EM++ GY P+ S
Sbjct: 494 GETSHPMRDEIIGLMRELDEEMRKRGYAPDTS 525
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 165/302 (54%), Gaps = 3/302 (0%)
Query: 18 DSSPFAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
D FA L+ +C L V ++VHAR S F+ + +++ LID+YAK G R
Sbjct: 103 DHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRA 162
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VFD +S+ N +W ++I+G + G +A RLF P R+ +W +++SG Q +A
Sbjct: 163 VFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDA 222
Query: 136 LGYFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
FV+M E ++++ S + ACA +++G Q+H ++ Y S +++ +ALID
Sbjct: 223 FHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALID 282
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KC + A+ +F M +++VSW S+I Q+G A +AL ++ M+ +G++P+EVT
Sbjct: 283 MYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVT 342
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
++ AC+ +G + ++ + L L+D++++ G L+EA + M
Sbjct: 343 FVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTM 402
Query: 315 PI 316
P+
Sbjct: 403 PV 404
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 221/512 (43%), Gaps = 108/512 (21%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++HA+IIK+ I N L++ Y KCG
Sbjct: 23 KKLHAQIIKAGLNQHEPIPNTLLNAYGKCG------------------------------ 52
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
I DA +LF ++P RD +W S+++ +R AL + S F + F S +
Sbjct: 53 -LIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLV 111
Query: 159 SACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
ACA G + K G QVHA S +S D + S+LIDMY K G R VFD + N
Sbjct: 112 KACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLN 171
Query: 217 IVSWNSLITCYE-------------------------------QNGPASDALEVFVRMMA 245
+SW ++I+ Y Q+G DA +FV M
Sbjct: 172 SISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRH 231
Query: 246 SGIE-PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
GI D + L+SVV ACA+LA ++ G Q+H ++ + L + NAL+DMYAKC L
Sbjct: 232 EGISVTDPLVLSSVVGACANLALWELGKQMHGVVITL-GYESCLFISNALIDMYAKCSDL 290
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
A+ +F M ++VVS TS++ G A Q+G
Sbjct: 291 VAAKYIFCEMCRKDVVSWTSIIVGTA-------------------------------QHG 319
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSGEE 423
+ EEAL L+ + V P TF L++AC++ + GR T V HG+
Sbjct: 320 QAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGI------S 373
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+ L+D++ + G +++ + TM V D +W A++ C ++G A+ +
Sbjct: 374 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADH 433
Query: 483 ML-LCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+L L E P ++ + A AG+ E+ K
Sbjct: 434 LLNLKPEDPSSYILLSNIYAG--AGMWEDVSK 463
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/483 (41%), Positives = 285/483 (59%), Gaps = 8/483 (1%)
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ L++ Y + G A++VF+ ++ +IVSW LI+ Y A +F + S
Sbjct: 38 HLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHS 97
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G+ PD + VSAC G +H + R E L +D ++GNAL+DMY++ G +
Sbjct: 98 GLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFE-LGSDPIVGNALIDMYSRSGAIEV 156
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A VF M I++V S TS+++G+ K + +++AR +F +M RN VSW A+I GY Q
Sbjct: 157 ACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVP 216
Query: 367 EEALGLFRLLKRESV-CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
L LF+ ++ E PT T +L+ CA++ LG H +V K L D
Sbjct: 217 IPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDL------D 270
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ V N+L+DMY K G++ +IF+ M +RD SW MI G A +G GT AL F M
Sbjct: 271 VTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSK 330
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G P+ VT++ VL ACSHAGLV EGR F M + HG+ P HY CMVDLLGRAG L
Sbjct: 331 SGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLR 390
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EAK LIE MP++PD+VIW SLL+AC VH N+ L E K ++E+EP + G Y+LL N+Y
Sbjct: 391 EAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYC 450
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
RW + ++ RK MR R V K+PGCSW+E+ G V+ F+ +D H + ++Y VL+ +T
Sbjct: 451 SASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAEDAVHCIRADVYTVLEAITE 510
Query: 666 EMK 668
+MK
Sbjct: 511 QMK 513
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 165/301 (54%), Gaps = 1/301 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + +C K +S+ R VH + + + S+ + N LID+Y++ G + A VF
Sbjct: 102 DSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVF 161
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M K+V +W S++ G +K I+ A R+F MP R+ SW +M++G+ Q + L
Sbjct: 162 KTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLE 221
Query: 138 YFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + + + LS CA F +G+ VH ++K+ DV + +AL+DMY
Sbjct: 222 LFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMY 281
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + A ++F M +R++ SW ++I+ +G + ALE F M SG+ P+EVTL
Sbjct: 282 AKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLL 341
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+SAC+ EG + ++++C ++ + +VD+ + G L EA+ + + MPI
Sbjct: 342 SVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPI 401
Query: 317 R 317
+
Sbjct: 402 K 402
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 201/482 (41%), Gaps = 84/482 (17%)
Query: 66 KCGCLYGARKVFDK------MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
KCG L +++ K + +K ++ + G DA ++F + D SW
Sbjct: 12 KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSW 71
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
++S + + +A F + + A+SAC D G VH ++ +
Sbjct: 72 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFR 131
Query: 180 SRYSSDVYMGSALIDMYG-------------------------------KCGRVSCARRV 208
SD +G+ALIDMY KC + ARR+
Sbjct: 132 FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRI 191
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE-PDEVTLASVVSACASLAA 267
FD M RN VSW ++IT Y Q LE+F M A G + P +T+ +V+S CA + A
Sbjct: 192 FDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGA 251
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
F G +H + + L D+ + NAL+DMYAK G L A +F MP R+V S T+M+S
Sbjct: 252 FDLGSSVHGYVNK-TNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMIS 310
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
G A +G+ AL F + + V P T
Sbjct: 311 GLA-------------------------------LHGKGTHALEAFSDMSKSGVVPNEVT 339
Query: 388 FGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
++L+AC++ + GR +V+ HG++ I ++D+ + G + +
Sbjct: 340 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIK------PKIQHYGCMVDLLGRAGLLREAK 393
Query: 447 RIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD----HVTMIGVLCA 501
+ E M ++ D V W +++ C +G AL ++ +PD ++ + + C+
Sbjct: 394 ELIEHMPIKPDSVIWRSLLSACLV--HGNLALAEMAGKMIIELEPDDDGVYILLWNIYCS 451
Query: 502 CS 503
S
Sbjct: 452 AS 453
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 346/633 (54%), Gaps = 48/633 (7%)
Query: 52 SEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
S IF+ L+ + +C +++ + + ++ N +++ + ++ +F+ +
Sbjct: 19 SPIFL---LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHI 75
Query: 112 -PERDQCSWNSMVSGFAQ--HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFK 168
P + ++N M+ HD + L + +M + N + + ++F ACA + +
Sbjct: 76 TPHPNDYAFNIMLRATTTTWHD-YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIR 134
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
M H + K +D + ++++ MY +CG AR+VFD + E+++VSWNSL++ Y
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 229 QNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+ G A +A+EVF R+ SG EPDE++L SV+ AC L + G + ++ ++ +
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE-RGMKVN 253
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+G+AL+ MY+KCG+L S+R +F M
Sbjct: 254 SYIGSALISMYSKCGEL-------------------------------VSSRRIFDGMPS 282
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
R+ ++WNA I+ Y QNG +EA+ LF +K V P T +L+ACA++ L LG+Q
Sbjct: 283 RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQM 342
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ GL + DIFV +LIDMY KCGS+E R+F M ++ SWNAMI
Sbjct: 343 DEYATHRGL------QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISAL 396
Query: 468 AQNGYGTEALGLFKKMLLCG--EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
A +G EAL LF++M G +P+ +T + +L AC HAGLV+EG + F MS GL
Sbjct: 397 ASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLV 456
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY+CMVDLL RAG L EA +IE MP +PD V G+L +AC+ +N+ +GE V +
Sbjct: 457 PKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQM 516
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
LLE++PSNSG Y++ S +Y L W + R+R LMR+ GV K PGCSWIE+ + F+
Sbjct: 517 LLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLS 576
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
D + ++ ++ +L E+K+ GYVP D
Sbjct: 577 GDGLTLDSIDVRNIIDLLYEELKKEGYVPKIVD 609
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 33/300 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + R V +++ +I + LI +Y+KCG L +R++F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M +++ TWN+ I+ + G D+A LF SM E
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN----------------------- 314
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ + + LSACA +G Q+ + D+++ +ALIDMY
Sbjct: 315 --------GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYA 366
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTL 255
KCG + A+RVF+ M +N SWN++I+ +G A +AL +F RM G P+++T
Sbjct: 367 KCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITF 426
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++SAC EG ++ + L + + +VD+ ++ G L EA V ++MP
Sbjct: 427 VSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMP 486
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 344/623 (55%), Gaps = 50/623 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + S + +H ++IK+ F +I+ L D+Y K L A KVF++M
Sbjct: 36 FPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEM- 94
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P R+ S N +SGF+++ F EALG F +
Sbjct: 95 ------------------------------PHRNLPSLNVTISGFSRNGYFREALGAFKQ 124
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ NF + + S L ACA ++ QVH L K SD+Y+ +A++ MY CG
Sbjct: 125 VGLGNFRPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGE 181
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVS 260
+ A++VFD + ++N+VS+N+ I+ QNG +VF ++ +SG P+ VTL S++S
Sbjct: 182 LVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILS 241
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNV 319
AC+ L + G QIH +++ E + D ++G ALVDMY+KCG + A +F + RN+
Sbjct: 242 ACSKLLYIRFGRQIHGLVVKIE-INFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNL 300
Query: 320 VSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRL 375
V+ SM++G A +F ++ LE + +WN +I+G++Q G+ EA F
Sbjct: 301 VTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHK 360
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ V + + +LL AC+ L+ LQ G++ H H ++ + ++D F+ +LIDM
Sbjct: 361 MQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNI------DTDEFISTALIDM 414
Query: 436 YMKCGSVEDGCRIF--ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
YMKCG R+F + D WNAMI G +NG A +F +M +P+
Sbjct: 415 YMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSA 474
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ +L CSH G ++ G + F M++++GL P +H+ CMVDLLGR+G L EA+ LI
Sbjct: 475 TLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHE 534
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP + ++ SLL AC+ H + LGE +AKKL E+EP + P+V+LSN+YA GRWG+V
Sbjct: 535 MP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDV 593
Query: 614 VRVRKLMRKRGVVKQPGCSWIEI 636
RVR++M RG+ K PGCS I +
Sbjct: 594 ERVREMMNDRGLKKPPGCSSIGV 616
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 196/399 (49%), Gaps = 43/399 (10%)
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ EAL + K+HS + +++F L A A G +H L K+ + D+Y +A
Sbjct: 14 YREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATA 73
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L DMY K +S A +VF+ M RN+ S N I+ + +NG +AL F ++ P+
Sbjct: 74 LADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPN 133
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VT+ASV+ ACAS+ +G Q+H ++ + +D+ + A+V MY+ CG+L A+ VF
Sbjct: 134 SVTIASVLPACASVEL--DG-QVHCLAIKL-GVESDIYVATAVVTMYSNCGELVLAKKVF 189
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D++ +NV VS+NA I+G QNG
Sbjct: 190 DQILDKNV-------------------------------VSYNAFISGLLQNGAPHLVFD 218
Query: 372 LFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F+ LL+ P T ++L+AC+ L ++ GRQ H VVK + F D VG
Sbjct: 219 VFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINF------DTMVGT 272
Query: 431 SLIDMYMKCGSVEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+L+DMY KCG IF E R+ V+WN+MI G NG A+ LF+++ G +
Sbjct: 273 ALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLE 332
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
PD T ++ S G V E K+F M +A LK
Sbjct: 333 PDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLK 371
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +L +C + + R++H ++K + + + L+D+Y+KCGC + A +F
Sbjct: 232 NSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIF 291
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRF 132
++S ++N+ TWNS+I G++ G D A LF + E D +WN+M+SGF+Q +
Sbjct: 292 IELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQV 351
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA +F KM S S S S L AC+ + G ++H ++ +D ++ +AL
Sbjct: 352 VEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTAL 411
Query: 193 IDMYGKCGRVSCARRVF--DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
IDMY KCG ARRVF ++ + WN++I+ Y +NG A E+F +M ++P
Sbjct: 412 IDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQP 471
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ TL S++S C+ G Q+ + R L +VD+ + G+L EA+ +
Sbjct: 472 NSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQEL 531
Query: 311 FDRMP 315
MP
Sbjct: 532 IHEMP 536
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 196/431 (45%), Gaps = 80/431 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S A +L +C SV +VH IK S+I++ ++ +Y+ CG L A+KVF
Sbjct: 133 NSVTIASVLPAC---ASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVF 189
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +KNV ++N+ I+GLL+ G +F + E NS+
Sbjct: 190 DQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSV--------------- 234
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ S LSAC+ + + G Q+H L+ K + D +G+AL+DMY
Sbjct: 235 ---------------TLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYS 279
Query: 198 KCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT-- 254
KCG A +F + RN+V+WNS+I NG + A+E+F ++ G+EPD T
Sbjct: 280 KCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWN 339
Query: 255 ---------------------------------LASVVSACASLAAFKEGLQIHARLMRC 281
+ S++ AC++L+A + G +IH +R
Sbjct: 340 TMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRT 399
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMVSGYAKASSVKSAR 339
+ D + AL+DMY KCG AR VF + I+ + +M+SGY + +SA
Sbjct: 400 -NIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAF 458
Query: 340 LMFTKMLERNVVSWNALIAGY----TQNGENEEALGLFRLLKRE-SVCPTHYTFG---NL 391
+F +M E V +A + + GE + LF+++ R+ + PT FG +L
Sbjct: 459 EIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDL 518
Query: 392 LNACANLADLQ 402
L L + Q
Sbjct: 519 LGRSGRLKEAQ 529
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 48/291 (16%)
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IA NG EAL L+ L SV +TF LL A A L G+ HT ++K G
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
DI+ +L DMYMK + ++FE M R+ S N I G ++NGY EA
Sbjct: 65 HL------DIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREA 118
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCAC--------------------------------SH 504
LG FK++ L +P+ VT+ VL AC S+
Sbjct: 119 LGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSN 178
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC----LDEAKTLIEAMPMQPDA 560
G + +K F + ++ ++ Y + L + G D K L+E+ P++
Sbjct: 179 CGELVLAKKVFDQILDKNVVS-----YNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNS 233
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYAELGRW 610
V S+L+AC I G + +++IE + ++ L +MY++ G W
Sbjct: 234 VTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCW 284
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q G +A L S LL +C ++ + +H I++ ++ FI LID+Y KCG
Sbjct: 362 QSAGVIASLKS--ITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCG 419
Query: 69 CLYGARKVFDKMSNK--NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
Y AR+VF + K + WN++I SG+
Sbjct: 420 HSYLARRVFCQFQIKPDDPAFWNAMI-------------------------------SGY 448
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR--YSS 184
++ ++ A F +M E + + S LS C+ + + G Q+ ++++ +
Sbjct: 449 GRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPT 508
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+ G ++D+ G+ GR+ A+ + M E ++ + SL+ + ++ E+ ++
Sbjct: 509 SEHFG-CMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKL- 566
Query: 245 ASGIEPDEVTLASVVS 260
S +EP + T ++S
Sbjct: 567 -SELEPQDPTPFVILS 581
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/552 (37%), Positives = 311/552 (56%), Gaps = 39/552 (7%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L AC S ++H K+ ++D + L +Y C +V ARR+FD + ++
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+ WN +I Y NGP A++++ M+ G+ P++ T V+ AC+ L A ++G++IH+
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA------- 330
+ L +D+ + ALVD YAKCG L EA+ +F M R+VV+ +M++G +
Sbjct: 135 -AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 331 ---------------KASSVKS----------ARLMFTKMLERNVVSWNALIAGYTQNGE 365
+S++ AR +F M RN VSW+A+I GY +
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDC 253
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+EAL +FR+++ + P T +L AC++LA LQ G HG + G +D
Sbjct: 254 MKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG------FCSHGYLIVRGFATD 307
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ N+LIDMY KCG + +F M D VSWNAMI+G +G G EALGLF +L
Sbjct: 308 TLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA 367
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KPD +T I +L +CSH+GLV EGR +F +MS++ + P +H CMVD+LGRAG +D
Sbjct: 368 LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLID 427
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
EA I MP +PD IW +LL+AC++H+NI LGE V+KK+ + P ++G +VLLSN+Y+
Sbjct: 428 EAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYS 487
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
GRW + +R + G+ K PGCSWIEI G V+ F+ D+ H +I L+ L
Sbjct: 488 AAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLV 547
Query: 666 EMKRVGYVPNAS 677
EMKR+GY S
Sbjct: 548 EMKRLGYQAECS 559
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 215/493 (43%), Gaps = 82/493 (16%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L F + + LL++C++SKS+++ +++H +K+ ++ + ++L +Y C + A
Sbjct: 3 LRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLA 62
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R++FD++ N +V WN ++ +A + F
Sbjct: 63 RRLFDEIPNPSVIL-------------------------------WNQIIRAYAWNGPFD 91
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A+ + M ++Y++ L AC+G + + G ++H+ SDV++ +AL+
Sbjct: 92 GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALV 151
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCG + A+R+F M R++V+WN++I G DA+++ ++M GI P+
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211
Query: 254 TLASVVSACASLA----------------------------AFKEGLQIHARLMRCEKLR 285
T+ V+ C L KE L I R+M+ +
Sbjct: 212 TIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIF-RMMQLSGID 270
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET----SMVSGYAKASSVKSARLM 341
DL ++ + L C + +R ++T +++ Y+K + AR +
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F +M ++VSWNA+I GY +G EALGLF L + P TF LL++C
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSC------ 384
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VE 454
+H+ +V G + D + ++D+ + G +++ M E
Sbjct: 385 -----SHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439
Query: 455 RDWVSWNAMIVGC 467
D W+A++ C
Sbjct: 440 PDVRIWSALLSAC 452
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+LL AC L ++ H H +K + +D V + L +Y+ C V R+F
Sbjct: 13 HLLEACIQSKSLTEAKKIHQHFLK------NTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ + + WN +I A NG A+ L+ ML G +P+ T VL ACS +E
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+G + S +K GL D + C +VD + G L EA+ L +M + D V W +++
Sbjct: 127 DGVE-IHSHAKMFGLE--SDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMI 182
Query: 568 AACKVH 573
A C ++
Sbjct: 183 AGCSLY 188
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/593 (36%), Positives = 333/593 (56%), Gaps = 19/593 (3%)
Query: 95 LLKWGFIDDASRLFASMPERDQCS-------WNSMVSGFAQHDRFSEALGYFVKMHSENF 147
LL + + D RL + QC+ +M+ GF + + + AL F ++ +
Sbjct: 69 LLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRL 128
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCAR 206
+ A+ A S +H + K + V +G+AL+ MY + AR
Sbjct: 129 PADARTIVFAVKAATTSS--SPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDAR 186
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASL 265
++FD M +R++VSW +L+ Y + G +A VF RM+ A G P+EVTL + SA +
Sbjct: 187 KLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQI 246
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
G +H ++ +R + L NALVDM+ KCG + A+ +FD MPI++V S TSM
Sbjct: 247 GLLGLGRMVHQCVVE-SGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSM 305
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
VS YAK +++A +F ++ RN VSW+ ++A Y+Q EEA+ +F + V P
Sbjct: 306 VSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPID 365
Query: 386 YTFGNLLNACANLADLQLGRQAH-THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
T ++L+ACA L L +GR + ++V H + E + + N+ IDM+ KCG V
Sbjct: 366 ATLVSVLSACAQLGCLDVGRCLYDAYIVSHKV------ELTVNLSNAFIDMFAKCGDVGA 419
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R+F M +++ VSWN MIV A +G EAL LF+K G PD +T IGVL ACSH
Sbjct: 420 ASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSH 479
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+GLV EGR +F M +G+ P +HY CM+DLLG+ G L+EA + +MP+ D WG
Sbjct: 480 SGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWG 539
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL AC++H N+ +G+ A KL+ ++PS+SG YVL+S +YA +WG+V +R +MR RG
Sbjct: 540 ALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRG 599
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V K PGCS IE+ G + F+ D H +++IY L+ + K GY+ + S
Sbjct: 600 VKKNPGCSSIEVDGKFHEFLAADVSHAHSEDIYAALENIYLHSKLEGYISHVS 652
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 157/287 (54%), Gaps = 17/287 (5%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R VH +++S + ++N L+D++ KCGC+ A+++FD M K+V++W S+++ K
Sbjct: 253 RMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKC 312
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G +++A +LF +P R+ SW+ MV+ ++Q + EA+ F M + + + S L
Sbjct: 313 GDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVL 372
Query: 159 SACAGSVDFKMGTQVH-ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
SACA +G ++ A + + V + +A IDM+ KCG V A R+F M ++N+
Sbjct: 373 SACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNV 432
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWN++I + +G + +AL +F + A GI PDE+T V+SAC+ EG + H +
Sbjct: 433 VSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEG-RYHFK 491
Query: 278 LMRCEKLRNDLVLG--------NALVDMYAKCGKLNEARCVFDRMPI 316
M+ +V G ++D+ K G L EA V MP+
Sbjct: 492 EMK-------IVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPV 531
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 204/473 (43%), Gaps = 99/473 (20%)
Query: 32 SKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
+ S S +H K F + + + N L+ +YA L ARK+FD+M++++V +W +
Sbjct: 143 TTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTT 202
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
++ G + G D+A R+F M +V+G +
Sbjct: 203 LVDGYARGGLPDEAWRVFCRM----------VVAGGGWPN-------------------- 232
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
E + +A SA +G VH + +S V + +AL+DM+GKCG V+ A+ +FD
Sbjct: 233 EVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFD 292
Query: 211 GM-------------------------------RERNIVSWNSLITCYEQNGPASDALEV 239
GM RN VSW+ ++ Y Q +A+ +
Sbjct: 293 GMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRI 352
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F M+A+G+EP + TL SV+SACA L G ++ + K+ + L NA +DM+A
Sbjct: 353 FNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFA 412
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG + A +F M +NVV SWN +I
Sbjct: 413 KCGDVGAASRLFRNMEDKNVV-------------------------------SWNTMIVA 441
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ +G++EEAL LF+ K + P T+ +L+AC++ + GR ++ +
Sbjct: 442 HALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKE-----MKIV 496
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G E +ID+ K G +E+ + +M V D W A++ C +G
Sbjct: 497 YGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHG 549
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 304/505 (60%), Gaps = 11/505 (2%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+HA+L + + L Y GR+ + +F + ++ W ++I + G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
AL + +M+ G+EP+ T +S++ C + G +H++ ++ +DL +
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKL-GFDSDLYVR 162
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
L+D+YA+ G + A+ +FD MP +++VS T+M++ YAK + +AR++F M ER+ V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WN +I GYTQNG EAL LFR + + P T ++L+AC L L+ GR H+++
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+G++F ++ VG +L+DMY KCGS+ED +F+ + ++D V+WN+MIVG A +G
Sbjct: 283 ENNGIQF------NVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHG 336
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ EAL LFK M G P ++T IG+L AC H+G V EG F+ M E+G+ P +HY
Sbjct: 337 FSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY 396
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMV+LLGRAG +++A L++ M ++PD V+WG+LL AC++H I LGE + + L++
Sbjct: 397 GCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNL 456
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
+NSG Y+LLSN+YA +G W V R+R +M+ GV K+PGCS IE+ V+ F+ HP
Sbjct: 457 ANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHP 516
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNA 676
KEIY++L+ + +K GY P
Sbjct: 517 KRKEIYMMLEEINGWLKSHGYTPQT 541
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 218/488 (44%), Gaps = 107/488 (21%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
F+ ++ A L+D +SK++S ++HA + + + +L YA G L +
Sbjct: 27 FISTNRLAVLID---KSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVA 83
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+F + N +VF W +II G A +A
Sbjct: 84 LFGRTQNPSVFFWTAII-------------------------------HGHALRGLHEQA 112
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L ++ +M ++ + ++F S L C + G +H+ K + SD+Y+ + L+D+
Sbjct: 113 LNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDV 168
Query: 196 -------------------------------YGKCGRVSCARRVFDGMRERNIVSWNSLI 224
Y K G + AR +FDGM ER+ V WN +I
Sbjct: 169 YARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMI 228
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y QNG ++AL +F RM+ + +P+EVT+ SV+SAC L A + G +H+ + +
Sbjct: 229 DGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI-ENNGI 287
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
+ ++ +G ALVDMY+KCG L +AR VFD++ ++VV+ SM+ GYA
Sbjct: 288 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYA-------------- 333
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+G ++EAL LF+ + R + PT+ TF +L+AC + + G
Sbjct: 334 -----------------MHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 376
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAM 463
+ + ++ G E I ++++ + G VE + + M +E D V W +
Sbjct: 377 WD-----IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTL 431
Query: 464 IVGCAQNG 471
+ C +G
Sbjct: 432 LGACRLHG 439
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/676 (34%), Positives = 362/676 (53%), Gaps = 100/676 (14%)
Query: 2 ATQRSVKQIVGDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
AT + V + + + D P+ ++S + +HA ++K + + ++N +
Sbjct: 82 ATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSAGKAGML-LHAYLLKLGHSHDHHVRNAI 140
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
+ +YAK GC+ ARK LF MP+R WN
Sbjct: 141 MGIYAKYGCIELARK-------------------------------LFDEMPDRTAADWN 169
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
++SG+ + C K T++ ++ +S
Sbjct: 170 VIISGYWK--------------------------------CGNE---KEATRLFCMMGES 194
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+V + ++ + K + AR FD M ER + SWN++++ Y Q+G A + + +F
Sbjct: 195 E--KNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLF 252
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
M++SG EPDE T +V+S+C+SL I +L R R++ + AL+DM+AK
Sbjct: 253 DDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRM-NFRSNYFVKTALLDMHAK 311
Query: 301 CGKLNEARCVFDRMPI-RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
CG L A+ +F+++ + +N V+ +M+S YA+ + AR +F KM ERN VSWN++IAG
Sbjct: 312 CGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAG 371
Query: 360 YTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
Y QNGE+ +A+ LF+ ++ + P T ++ +AC +L L LG A + + ++ ++
Sbjct: 372 YAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKL 431
Query: 419 -LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+SG NSLI MY++CGS+ED F+ M +D VS+N +I G A +G+GTE++
Sbjct: 432 SISGY-------NSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESI 484
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
L KM G PD +T IGVL ACSHAGL+EEG K F S+ P DHY CM+D+
Sbjct: 485 KLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESIK-----VPDVDHYACMIDM 539
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGR G L+EA LI++MPM+P A I+GSLL A +H+ + LGE A KL ++EP NSG Y
Sbjct: 540 LGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNY 599
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSN+YA GRW +V +VR MRK+GV K F+V+++ H +IY
Sbjct: 600 VLLSNIYALAGRWKDVDKVRDKMRKQGVKK-------------TTFIVENRPHE-KSDIY 645
Query: 658 LVLKMLTREMKRVGYV 673
+L L +++R GYV
Sbjct: 646 NLLAHLKVKLRRAGYV 661
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/657 (34%), Positives = 362/657 (55%), Gaps = 69/657 (10%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S+ +A +LDSC S +++HA IKS F + F+ +L+ +YA+ C +
Sbjct: 51 STTYASILDSC---GSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYAR-NCSF------- 99
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
++A +F +MP R+ SW +++ + + F EA
Sbjct: 100 -----------------------ENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFL 136
Query: 139 FVKMHSENFA--LSEYSFGSALSACAGSVDFKMGTQVHALLSK---------------SR 181
F ++ E L + F L C G ++G Q+H + K SR
Sbjct: 137 FEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSR 196
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI----VSWNSLITCYEQNGPASDAL 237
S+ Y +A+I Y + G + A+ +FD M + + +SWNS+I+ Y +A
Sbjct: 197 KSAASY--NAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAY 254
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F ++ GIEPD TL SV++ CA +A+ + G + H+ L L+++ ++G ALV+M
Sbjct: 255 SLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHS-LAIVRGLQSNSIVGGALVEM 313
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSW 353
Y+KC + A+ FD + R++ + +++SGYA+ + + R + KM E NV +W
Sbjct: 314 YSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTW 373
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
N +IAGY +N + + A+ LF ++ ++ P YT G +L AC+ LA +Q G+Q H + ++
Sbjct: 374 NGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIR 433
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG 473
+G +SD+ +G +L+DMY KCG V+ R++ + + VS NAM+ A +G+G
Sbjct: 434 ------AGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHG 487
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
E + LF++ML +PDHVT + VL +C HAG +E G + + M + + LK HYTC
Sbjct: 488 EEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLK-HYTC 546
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
MVDLL RAG L EA LI+ +P + DAV W +LL C +H + LGE A+KL+E+EP+N
Sbjct: 547 MVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNN 606
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
G YV+L+N+YA G+W + + R+LM+ G+ K+PGCSWIE ++VF+ KD H
Sbjct: 607 PGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVAKDIYH 663
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 185/395 (46%), Gaps = 37/395 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS +L C S+ + H+ I S + L+++Y+KC + A+ F
Sbjct: 268 DSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAF 327
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D +S +++ TWN++I+G + + L M E + +WN +++G+ ++ ++
Sbjct: 328 DGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYD 387
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A+ F +M N Y+ G L+AC+ + G QVHA ++ + SDV++G+AL+
Sbjct: 388 SAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALV 447
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCG V RV++ + N+VS N+++T Y +G + + +F RM+AS + PD V
Sbjct: 448 DMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHV 507
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +V+S+C + + G + A LM + L +VD+ ++ G+L EA +
Sbjct: 508 TFLAVLSSCVHAGSLEIGHECLA-LMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKN 566
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG-YTQNGENEEALGL 372
+P E + V+WNAL+ G + N + +
Sbjct: 567 LPT------------------------------EADAVTWNALLGGCFIHNEVDLGEIAA 596
Query: 373 FRLLKRESVCPTHYT-FGNLLNACANLADLQLGRQ 406
+L++ E P +Y NL + L RQ
Sbjct: 597 EKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQ 631
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 213/504 (42%), Gaps = 122/504 (24%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS----QFASEIFIQ---------NRLIDV 63
LD F +L C +V R++H +K + A E+F + N +I
Sbjct: 149 LDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMIAG 208
Query: 64 YAKCGCLYGARKVFDKMSNKNV----FTWNSIITGLLKWGFIDDASRLFASMPERDQCSW 119
Y + G L+ A+++FD+M + V +WNS+I+G + D+A LF RD
Sbjct: 209 YWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLF-----RD---- 259
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
+ E ++ GS L+ CA + G + H+L
Sbjct: 260 ----------------------LLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIV 297
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE----------- 228
S+ +G AL++MY KC + A+ FDG+ ER++ +WN+LI+ Y
Sbjct: 298 RGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIREL 357
Query: 229 ------------------------QNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
+N A+++F M + + PD T+ +++AC+
Sbjct: 358 HQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSR 417
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA + G Q+HA +R +D+ +G ALVDMYAKCG + V++ + N+VS +
Sbjct: 418 LATIQRGKQVHAYSIRAGH-DSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNA 476
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++ YA +G EE + LFR + V P
Sbjct: 477 MLTAYA-------------------------------MHGHGEEGIALFRRMLASKVRPD 505
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
H TF +L++C + L++G + +V + + + ++D+ + G + +
Sbjct: 506 HVTFLAVLSSCVHAGSLEIGHECLALMVAYNVM------PSLKHYTCMVDLLSRAGQLYE 559
Query: 445 GCRIFETM-VERDWVSWNAMIVGC 467
+ + + E D V+WNA++ GC
Sbjct: 560 AYELIKNLPTEADAVTWNALLGGC 583
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 225/486 (46%), Gaps = 68/486 (13%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S ++ S L +C + +G Q+HA KS +++ ++ + L+ MY + A VF
Sbjct: 50 SSTTYASILDSCGSPI---LGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP--DEVTLASVVSACASLAA 267
D M RN+ SW +L+ Y + G +A +F +++ G+ D V+ C L A
Sbjct: 107 DTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCA 166
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+ G Q+H L++D G + A +F R ++ S +M++
Sbjct: 167 VELGRQMHGM-----ALKHD--------------GDMKSAFEMFSRFSRKSAASYNAMIA 207
Query: 328 GYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
GY + ++ A+ +F +M ++++ +SWN++I+GY +EA LFR L +E + P
Sbjct: 208 GYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEP 267
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+T G++L CA++A ++ G++AH+ + GL +S+ VG +L++MY KC +
Sbjct: 268 DSFTLGSVLAGCADMASIRRGKEAHSLAIVRGL------QSNSIVGGALVEMYSKCQDIV 321
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
F+ + ERD +WNA+I G A+ + L +KM G +P+ T G++
Sbjct: 322 AAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGII---- 377
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
AG VE ++Y S+M + T ++ ++PD
Sbjct: 378 -AGYVEN-KQYDSAM---------------------------QLFTEMQIANLRPDIYTV 408
Query: 564 GSLLAACKVHRNIMLGEYV-AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
G +LAAC I G+ V A + S+ L +MYA+ G RV ++
Sbjct: 409 GIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISN 468
Query: 623 RGVVKQ 628
+V
Sbjct: 469 PNLVSH 474
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/460 (42%), Positives = 292/460 (63%), Gaps = 33/460 (7%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PD V+L +V+ ACAS+ A+ G +H +R DL +GNALVDMYAKCG ++EA
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFE-DLFVGNALVDMYAKCGMVDEA 67
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQN 363
VFDR+ ++VVS +MV+GY++ + A +F KM +E NVVSW+A+IA + Q
Sbjct: 68 SKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQR 127
Query: 364 GENEEALGLFR----------------LLKRES-VCPTHYTFGNLLNACANLADLQLGRQ 406
G E L +FR + K++ V P +T L ACA LA L+LGRQ
Sbjct: 128 GLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQ 187
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
H +++++ + + ++V N LIDMY K G ++ +F+ + ++++VSW +++ G
Sbjct: 188 IHAYILRNHF-----DSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTG 242
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+G G EAL +F +M G +PD VT++ VL ACSH+G++++G ++F+SMSKE G+ P
Sbjct: 243 YGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIP 302
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
++HY CMVDLLGRAG L+EA LIE M M+P +++W +LL+ C++H N+ LGE+ AK+L
Sbjct: 303 GQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQL 362
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
LE+ N G Y LLSN+YA RW +V RVR LM+ G+ K+PGCSW++ F V
Sbjct: 363 LELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVA 422
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDE 680
DK HP +K+IY +L+ LT+ +K +GYVP S DDE
Sbjct: 423 DKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDE 462
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 184/355 (51%), Gaps = 23/355 (6%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + + VH ++S ++F+ N L+D+YAKCG + A KVF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD----QCSWNSMVSGFAQHDRFS 133
D++ K+V +WN+++ G + G +DA LF M E + SW+++++ FAQ
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131
Query: 134 EALGYFVKM-HSE-NFALSEYSF---------------GSALSACAGSVDFKMGTQVHAL 176
E L F +M H E N AL +S+ AL ACA ++G Q+HA
Sbjct: 132 ETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAY 191
Query: 177 LSKSRYSSD-VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
+ ++ + S +Y+ + LIDMY K G + AR VFD ++++N VSW SL+T Y +G +
Sbjct: 192 ILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKE 251
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
ALEVF M G++PD VTL V+ AC+ +G++ + + + +V
Sbjct: 252 ALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMV 311
Query: 296 DMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
D+ + G+LNEA + + M + + + +++SG ++V+ ++LE N
Sbjct: 312 DLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELN 366
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 318/541 (58%), Gaps = 12/541 (2%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDV-YMGSALIDMYGKC 199
+ S L + + + C + ++H+ +LS +S ++ + LI+MYGKC
Sbjct: 51 LESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKC 110
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
GR+ AR +F+ M RN+ +W + + NG S+AL F RM SG PD VT + ++
Sbjct: 111 GRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVIL 170
Query: 260 SACASLAA--FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+A A + A +G +IH R R L ++V+G A++ MY KCG+L++AR F+ + +
Sbjct: 171 AAIAQMGAAAIDQGREIH-RYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWK 229
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N V+ +M++ Y + A +F +M + + V WNA+IA Y Q+G ++AL L+R +
Sbjct: 230 NSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMH 289
Query: 378 RES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + P TF +++ CA L+ L+ GR H V ++++ V N+L+ MY
Sbjct: 290 DTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNF------DANLLVSNALVHMY 343
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +++ +F +M +D +SWN +I A +G+ +AL L+++M L G KP VT +
Sbjct: 344 GKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFV 403
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L ACSH GLV +G YF M +H + P H+ C++DLLGR G L EA+ ++++MP+
Sbjct: 404 GLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPI 463
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
Q +AV W SLL ACK H ++ G A ++++ P SG YVLLSN+YA GRW +V ++
Sbjct: 464 QANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKI 523
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
RK+M RGV K PG SWIEI V+ F+ D HP +EIY+ L + EMK +GYVP+
Sbjct: 524 RKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPDT 583
Query: 677 S 677
S
Sbjct: 584 S 584
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 222/498 (44%), Gaps = 117/498 (23%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE--IFIQNRLIDVYAKCGCLYGAR 74
LD +A L+ C + ++S RR+H+ I+ ++ F+ N LI++Y KCG L AR
Sbjct: 58 LDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYAR 117
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
++F+ M ++NV TW + + F+ + SE
Sbjct: 118 ELFESMPSRNVHTWTVAM-------------------------------AAFSHNGCHSE 146
Query: 135 ALGYFVKMHSENFALSEYSFGSAL--SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
AL +F +M+ +F L A G+ G ++H S +V +G+A+
Sbjct: 147 ALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAV 206
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-------- 244
I MYGKCGR+ AR F+ ++ +N V+WN+++T Y+ +G +ALE+F M
Sbjct: 207 ISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWN 266
Query: 245 ------------------------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ + P + T +V+ CA L+A K+G IHAR+ R
Sbjct: 267 AMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARV-R 325
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
+L++ NALV MY KCG L+EA VF M +++ +S +++S YA
Sbjct: 326 ATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYA---------- 375
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+G +++AL L++ + + V PT TF LL+AC
Sbjct: 376 ---------------------YHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSAC----- 409
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-V 453
+H +V GL + + D + S +ID+ + G + + + ++M +
Sbjct: 410 ------SHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPI 463
Query: 454 ERDWVSWNAMIVGCAQNG 471
+ + V W +++ C +G
Sbjct: 464 QANAVQWMSLLGACKTHG 481
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 166/329 (50%), Gaps = 6/329 (1%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+ R +H S + + +I +Y KCG L AR F+++ KN TWN+++T
Sbjct: 181 IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 240
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SENFALSEYS 153
G +A LF M + D WN+M++ +AQH R +AL + MH + + A + +
Sbjct: 241 YKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 300
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F + + CA K G +HA + + + +++ + +AL+ MYGKCG + A VF M+
Sbjct: 301 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 360
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
++ +SWN++I+ Y +G + AL ++ M G++P EVT ++SAC+ +GL
Sbjct: 361 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 420
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKA 332
R+ +++ + ++D+ + G+L EA V MPI+ N V S++
Sbjct: 421 YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTH 480
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYT 361
+K ++++R V W + GY
Sbjct: 481 GDLKRGVRAADQVVDR--VPWTS--GGYV 505
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 328/592 (55%), Gaps = 40/592 (6%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V N +++ K+ + +A R+F+ M +D +WN+M+ G+AQ R ++ F+ M
Sbjct: 256 DVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM- 314
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ F S S + AC S D ++G VH L S + D + LIDMY KCG +
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ VFD + ++ V+WNSLI Y Q+G + LE F +MM +PD VT ++S +
Sbjct: 375 AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFS 433
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
LA +G IH +++ +L++GN+L+D+YAKCG++++ VF M
Sbjct: 434 QLADINQGRGIHCDVIKF-GFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-------- 484
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+++SWN +IA + + ++ E + P
Sbjct: 485 -----------------------AHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMP 521
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +L C+ LA + G++ H ++ K SG ES++ +GN+LI+MY KCGS+E
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFK------SGFESNVPIGNALIEMYSKCGSLE 575
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+ ++F+ M E+D V+W A+I G G +AL F+ M L G PD V I + ACS
Sbjct: 576 NCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS 635
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
H+G+V+EG ++F M ++ L P +HY C+VDLL R+G L +A+ I +MPM+PDA +W
Sbjct: 636 HSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLW 695
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL+AC+ N + + V+KK+LE+ ++G YVL+SN+YA LG+W +V VR M+ +
Sbjct: 696 GALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTK 755
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
G+ K+PG SWIEI V VF DK ++ +L+ L R M + GYV +
Sbjct: 756 GLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVAD 807
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 267/554 (48%), Gaps = 76/554 (13%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
FL SS LL + +K+ R VH+ II S + + +LI YA+
Sbjct: 20 FLRSS----LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQ--------- 66
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
V D +S+ +VF S P + WNS++ + F++A
Sbjct: 67 VKDPISSVSVFRSIS---------------------PTNNVYLWNSIIRALTHNGLFTQA 105
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
LGY+ +M + ++F S +++CA +D ++G VH + + SD+Y+G+ALIDM
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDM 165
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + + AR VF+ M R+ VSWNSLI+ Y NG DAL+++ + +G+ PD T+
Sbjct: 166 YSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTM 225
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+SV+ AC SL A KEG+ +H + + + D+++GN L+ MY K +L EAR VF +M
Sbjct: 226 SSVLLACGSLMAVKEGVAVHGVIEKI-GIAGDVIIGNGLLSMYFKFERLREARRVFSKMA 284
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++ V+ +M+ GYA+ +++ +F M++ V
Sbjct: 285 VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV------------------------- 319
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
P + + + AC DLQ+G+ H +++ SG E D N LIDM
Sbjct: 320 -------PDMLSITSTIRACGQSGDLQVGKFVHKYLIG------SGFECDTVACNILIDM 366
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG + +F+T +D V+WN++I G Q+GY E L F KM+ KPD VT
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTF 425
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L S + +GR + K G ++D+ + G +D+ + M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484
Query: 556 MQPDAVIWGSLLAA 569
D + W +++A+
Sbjct: 485 AH-DIISWNTVIAS 497
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 200/464 (43%), Gaps = 82/464 (17%)
Query: 28 SCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFT 87
+C +S + + VH +I S F + N LID+YAKCG L A++VFD K+ T
Sbjct: 331 ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT 390
Query: 88 WNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
WNS+I +G+ Q + E L F M E
Sbjct: 391 WNSLI-------------------------------NGYTQSGYYKEGLESFKMMKMERK 419
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
S +F LS + D G +H + K + +++ +G++L+D+Y KCG + +
Sbjct: 420 PDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLK 478
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
VF M +I+SWN++I + ++ M G+ PDE T+ ++ C+ LA
Sbjct: 479 VFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAV 538
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
++G +IH + + +++ +GNAL++MY+KCG L VF M ++VV
Sbjct: 539 RRQGKEIHGYIFK-SGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVV------- 590
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+W ALI+ + GE ++AL F+ ++ V P
Sbjct: 591 ------------------------TWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVA 626
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGS 441
F + AC +H+ +VK GLRF ++D + + +D+ + G
Sbjct: 627 FIAFIFAC-----------SHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGL 675
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
+ +M ++ D W A++ C G A + KK+L
Sbjct: 676 LAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL 719
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL + ++ R +H +IK F +E+ I N L+DVYAKCG + KVF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
MS ++ +WN++I AS D C+ GF +
Sbjct: 481 SYMSAHDIISWNTVI----------------ASSVHFDDCT-----VGFQMIN------- 512
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+M +E E + L C+ + G ++H + KS + S+V +G+ALI+MY
Sbjct: 513 ---EMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYS 569
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + +VF M+E+++V+W +LI+ + G AL+ F M SG+ PD V +
Sbjct: 570 KCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIA 629
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ AC+ KEGL+ R+ L + +VD+ A+ G L +A MP++
Sbjct: 630 FIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMK 689
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/670 (32%), Positives = 364/670 (54%), Gaps = 42/670 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P LL C KS+S +++HA II + ++LI+ YA L A+
Sbjct: 94 PIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQ------ 147
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ + S F D WN ++S + ++ F +A+ +
Sbjct: 148 -------------------IVAECSNSF------DPLHWNMVISLYVKNCLFEDAISVYR 182
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M S+ +Y++ S L AC +D+ G VH + +S +++ +AL+ MYG+ G
Sbjct: 183 RMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFG 242
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR +FD M R+ VSWN++I+CY G +A +F M +GIE + + ++
Sbjct: 243 KLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAG 302
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRN-DLVLG-NALVDMYA-KCGKLNEARCVFDRMPIR 317
C FK L++ +++ +L + +V+G NA + A K GK V +
Sbjct: 303 GCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVF 362
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ V T +++ Y++ + A L+F K+ E+ +++WNA+++G+ +EE L R +
Sbjct: 363 DNVKNT-LITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREML 421
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE V P + T ++L CA +A+LQ G++ H ++VK +F + + + NSL++MY
Sbjct: 422 REGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQF----KGYLLLWNSLVEMYS 477
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+ G V + ++F+++ +D V++ +MI+G +G G AL LF +M KPDHVTM+
Sbjct: 478 RSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVA 537
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH+GLV +G+ F M + +G+ P +HY+CMVDL GRAG LD+AK +I M +
Sbjct: 538 VLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCK 597
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P + IW +L+ ACK+H N ++GE+ A KLLE++P +SG Y+L++NMYA R + R
Sbjct: 598 PTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEAR 657
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN-- 675
MR G + PGC+W+++ + F+ D +P + EI ++K L MK GY P+
Sbjct: 658 TYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMKDAGYAPSEG 717
Query: 676 -ASDDEAYEE 684
S +E +EE
Sbjct: 718 VVSSEEDFEE 727
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 247/516 (47%), Gaps = 31/516 (6%)
Query: 126 FAQHDRFSEALGYFVKM---HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
F ++ S A F+ + H+ +F + L C G Q+HA +
Sbjct: 64 FITYNHLSNAFKTFIHIQHHHASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGI 123
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
+ + S LI+ Y ++ A+ V + + + WN +I+ Y +N DA+ V+ R
Sbjct: 124 HQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRR 183
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M++ G+ PD+ T SV+ AC L + G+ +H + ++ ++ L + NALV MY + G
Sbjct: 184 MLSKGVIPDDYTYPSVLKACGELLDYDSGVAVH-KAIQESSIKWSLFVHNALVFMYGRFG 242
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIA 358
KL AR +FD MP R+ VS +M+S YA A +F M +ERN++ WN +
Sbjct: 243 KLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAG 302
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G G + AL LF + R + LNAC+++ ++LG++ H H V+
Sbjct: 303 GCLHTGNFKGALKLFSQM-RAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCF-- 359
Query: 419 LSGEESDIF--VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
D+F V N+LI MY +C + +F + E+ ++WNAM+ G A E
Sbjct: 360 ------DVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEV 413
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK-EHGLAPLKDHYTCMV 535
L ++ML G +P++VT+ +L C+ ++ G+++ M K E + +V
Sbjct: 414 SFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLV 473
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
++ R+G + EA+ + +++ + D V + S++ V + GE K E+ N
Sbjct: 474 EMYSRSGKVLEARKVFDSLS-RKDEVTYTSMIMGYGVSGD---GETALKLFAEMRRLNIK 529
Query: 596 P------YVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
P VL++ ++ L G+V+ RK++ G+
Sbjct: 530 PDHVTMVAVLIACSHSGLVAQGQVL-FRKMIEVYGI 564
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 225/481 (46%), Gaps = 45/481 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C VH I +S +F+ N L+ +Y + G L AR++F
Sbjct: 192 DDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELF 251
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D M ++ +WN++I+ G D+A RLF M ER+ WN++ G F
Sbjct: 252 DIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFK 311
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
AL F +M + L + L+AC+ K+G ++H ++ + + + LI
Sbjct: 312 GALKLFSQMRAV-IQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLI 370
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +C ++ A +F + E+ +++WN++++ + + + + M+ G+EP+ V
Sbjct: 371 TMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYV 430
Query: 254 TLASVVSACASLAAFKEGLQIHARLM-RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T+AS++ CA +A + G + H ++ R E+ + L+L N+LV+MY++ GK+ EAR VFD
Sbjct: 431 TIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFD 490
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ ++ V+ TSM+ GY + G+ E AL L
Sbjct: 491 SLSRKDEVTYTSMIMGYGVS-------------------------------GDGETALKL 519
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F ++R ++ P H T +L AC++ G A V+ + + G + + + +
Sbjct: 520 FAEMRRLNIKPDHVTMVAVLIACSH-----SGLVAQGQVLFRKMIEVYGIDPRVEHYSCM 574
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
+D++ + G ++ + M + + W +I C +G +G + L KPD
Sbjct: 575 VDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKI--HGNTVIGEWAAGKLLEMKPD 632
Query: 492 H 492
H
Sbjct: 633 H 633
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 33/300 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS L++C +V + +H +++ F ++N LI +Y++C L A +
Sbjct: 326 LDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLL 385
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F K+ K + TW N+M+SGFA DR E
Sbjct: 386 FRKIDEKGLITW-------------------------------NAMLSGFAHMDRSEEVS 414
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALID 194
+M E + + S L CA + + G + H + K ++ + + ++L++
Sbjct: 415 FLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVE 474
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY + G+V AR+VFD + ++ V++ S+I Y +G AL++F M I+PD VT
Sbjct: 475 MYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVT 534
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ +V+ AC+ +G + +++ + + + +VD++ + G L++A+ V M
Sbjct: 535 MVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGM 594
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 326/591 (55%), Gaps = 41/591 (6%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +++ N I+ +K+GF+ A+ LF MP+RD SWN+M+SG+ + +A F
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + YSF L A F +G QVH L+ K Y +VY+GS+L+DMY KC
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVV 259
RV A F + E N VSWN+LI + Q A + M M + + D T A ++
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ Q+HA++++ L++++ + NA++ YA CG
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKL-GLQHEITICNAMISSYADCG----------------- 252
Query: 320 VSETSMVSGYAKASSVKSARLMFTKML-ERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
SV A+ +F + ++++SWN++IAG+ Q G +E+A+ F L+
Sbjct: 253 --------------SVSDAKRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRS 298
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ Y F LL +C++LA LQLG+Q H K G F+S E FV +SLI MY K
Sbjct: 299 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG--FVSNE----FVISSLIVMYSK 352
Query: 439 CGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
CG +E + F+ + + V+WNAMI+G AQ+G G +L LF +M K DHVT
Sbjct: 353 CGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTA 412
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L ACSH GL++EG + + M + + P +HY VDLLGRAG +++AK LIE+MP+
Sbjct: 413 ILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLN 472
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD ++ + L C+ I + VA LLEIEP + YV LS+MY++L +W E V+
Sbjct: 473 PDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVK 532
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
K+M++RGV K PG SWIEI V F +D+ +PL ++IY+++K LT+EM+
Sbjct: 533 KMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 583
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 189/405 (46%), Gaps = 73/405 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F++LL K +VH +IK + +++ + L+D+YAKC + A +
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F ++S N +WN++I G ++ I A L M + +M +G
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV---TMDAG----------- 204
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+F L+ + + QVHA + K ++ + +A+I Y
Sbjct: 205 ----------------TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSY 248
Query: 197 GKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
CG VS A+RVFDG+ ++++SWNS+I + Q G + DA++ F + +S I+ D+
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 308
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++++ +C+ LA + G QIHA + + N+ V+ ++L+ MY+KCG + AR F ++
Sbjct: 309 SALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI-SSLIVMYSKCGIIESARKCFQQIS 367
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++ + V+WNA+I GY Q+G + +L LF
Sbjct: 368 SKH------------------------------STVAWNAMILGYAQHGLGQVSLDLFSQ 397
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+ ++V H TF +L AC +HT +++ GL L+
Sbjct: 398 MCNQNVKLDHVTFTAILTAC-----------SHTGLIQEGLELLN 431
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 190/408 (46%), Gaps = 39/408 (9%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
F+ + H K SD+Y+ + ++D Y K G + A +FD M +R+ VSWN++I+
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
Y G DA +F M SG + D + + ++ AS+ F G Q+H +++
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIK-GGYEC 134
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
++ +G++LVDMYAKC ++ +A F + N VS ++++G+ + +K+A +
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL----- 189
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
LGL + + +V TF LL + L +Q
Sbjct: 190 -----------------------LGLMEM--KAAVTMDAGTFAPLLTLLDDPMFCNLLKQ 224
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIV 465
H V+K GL + +I + N++I Y CGSV D R+F+ + +D +SWN+MI
Sbjct: 225 VHAKVLKLGL------QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
G AQ G +A+ F + K D +L +CS ++ G++ +++ + G
Sbjct: 279 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKSGFV 337
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + ++ + + G ++ A+ + + + V W +++ H
Sbjct: 338 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 385
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
G SDI+V N ++D Y+K G + +F+ M +RD VSWN MI G G +A LF
Sbjct: 30 GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLF 89
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC------- 533
M G D + +L + K F + HGL +K Y C
Sbjct: 90 TCMKRSGSDVDGYSFSRLLKGIASV-------KRFDLGEQVHGLV-IKGGYECNVYVGSS 141
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI-----MLGEYVAKKLLE 588
+VD+ + +++A + + +P++V W +L+A R+I +LG K +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 589 IEPSNSGPYVLL 600
++ P + L
Sbjct: 201 MDAGTFAPLLTL 212
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 344/623 (55%), Gaps = 50/623 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + S + +H ++IK+ F +I+ L D+Y K L A KVF++M
Sbjct: 96 FPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEM- 154
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P R+ S N +SGF+++ F EALG F +
Sbjct: 155 ------------------------------PHRNLPSLNVTISGFSRNGYFREALGAFKQ 184
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ NF + + S L ACA ++ QVH L K SD+Y+ +A++ MY CG
Sbjct: 185 VGLGNFRPNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGE 241
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVS 260
+ A++VFD + ++N+VS+N+ I+ QNG +VF ++ +SG P+ VTL S++S
Sbjct: 242 LVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILS 301
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNV 319
AC+ L + G QIH +++ E + D ++G ALVDMY+KCG + A +F + RN+
Sbjct: 302 ACSKLLYIRFGRQIHGLVVKIE-INFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNL 360
Query: 320 VSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRL 375
V+ SM++G A +F ++ LE + +WN +I+G++Q G+ EA F
Sbjct: 361 VTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHK 420
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ V + + +LL AC+ L+ LQ G++ H H ++ + ++D F+ +LIDM
Sbjct: 421 MQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNI------DTDEFISTALIDM 474
Query: 436 YMKCGSVEDGCRIF--ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
YMKCG R+F + D WNAMI G +NG A +F +M +P+
Sbjct: 475 YMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSA 534
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ +L CSH G ++ G + F M++++GL P +H+ CMVDLLGR+G L EA+ LI
Sbjct: 535 TLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHE 594
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
MP + ++ SLL AC+ H + LGE +AKKL E+EP + P+V+LSN+YA GRWG+V
Sbjct: 595 MP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDV 653
Query: 614 VRVRKLMRKRGVVKQPGCSWIEI 636
RVR++M RG+ K PGCS I +
Sbjct: 654 ERVREMMNDRGLKKPPGCSSIGV 676
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 196/399 (49%), Gaps = 43/399 (10%)
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ EAL + K+HS + +++F L A A G +H L K+ + D+Y +A
Sbjct: 74 YREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATA 133
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L DMY K +S A +VF+ M RN+ S N I+ + +NG +AL F ++ P+
Sbjct: 134 LADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPN 193
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VT+ASV+ ACAS+ +G Q+H ++ + +D+ + A+V MY+ CG+L A+ VF
Sbjct: 194 SVTIASVLPACASVEL--DG-QVHCLAIKL-GVESDIYVATAVVTMYSNCGELVLAKKVF 249
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D++ +NV VS+NA I+G QNG
Sbjct: 250 DQILDKNV-------------------------------VSYNAFISGLLQNGAPHLVFD 278
Query: 372 LFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F+ LL+ P T ++L+AC+ L ++ GRQ H VVK + F D VG
Sbjct: 279 VFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINF------DTMVGT 332
Query: 431 SLIDMYMKCGSVEDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
+L+DMY KCG IF E R+ V+WN+MI G NG A+ LF+++ G +
Sbjct: 333 ALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLE 392
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
PD T ++ S G V E K+F M +A LK
Sbjct: 393 PDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLK 431
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 159/305 (52%), Gaps = 7/305 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +L +C + + R++H ++K + + + L+D+Y+KCGC + A +F
Sbjct: 292 NSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIF 351
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRF 132
++S ++N+ TWNS+I G++ G D A LF + E D +WN+M+SGF+Q +
Sbjct: 352 IELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQV 411
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA +F KM S S S S L AC+ + G ++H ++ +D ++ +AL
Sbjct: 412 VEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTAL 471
Query: 193 IDMYGKCGRVSCARRVF--DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
IDMY KCG ARRVF ++ + WN++I+ Y +NG A E+F +M ++P
Sbjct: 472 IDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQP 531
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ TL S++S C+ G Q+ + R L +VD+ + G+L EA+ +
Sbjct: 532 NSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQEL 591
Query: 311 FDRMP 315
MP
Sbjct: 592 IHEMP 596
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 196/431 (45%), Gaps = 80/431 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S A +L +C SV +VH IK S+I++ ++ +Y+ CG L A+KVF
Sbjct: 193 NSVTIASVLPAC---ASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVF 249
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D++ +KNV ++N+ I+GLL+ G +F + E NS+
Sbjct: 250 DQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSV--------------- 294
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ S LSAC+ + + G Q+H L+ K + D +G+AL+DMY
Sbjct: 295 ---------------TLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYS 339
Query: 198 KCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT-- 254
KCG A +F + RN+V+WNS+I NG + A+E+F ++ G+EPD T
Sbjct: 340 KCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWN 399
Query: 255 ---------------------------------LASVVSACASLAAFKEGLQIHARLMRC 281
+ S++ AC++L+A + G +IH +R
Sbjct: 400 TMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRT 459
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR--NVVSETSMVSGYAKASSVKSAR 339
+ D + AL+DMY KCG AR VF + I+ + +M+SGY + +SA
Sbjct: 460 -NIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAF 518
Query: 340 LMFTKMLERNVVSWNALIAGY----TQNGENEEALGLFRLLKRE-SVCPTHYTFG---NL 391
+F +M E V +A + + GE + LF+++ R+ + PT FG +L
Sbjct: 519 EIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDL 578
Query: 392 LNACANLADLQ 402
L L + Q
Sbjct: 579 LGRSGRLKEAQ 589
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 48/291 (16%)
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
IA NG EAL L+ L SV +TF LL A A L G+ HT ++K G
Sbjct: 65 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 124
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
DI+ +L DMYMK + ++FE M R+ S N I G ++NGY EA
Sbjct: 125 HL------DIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREA 178
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCAC--------------------------------SH 504
LG FK++ L +P+ VT+ VL AC S+
Sbjct: 179 LGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSN 238
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC----LDEAKTLIEAMPMQPDA 560
G + +K F + ++ ++ Y + L + G D K L+E+ P++
Sbjct: 239 CGELVLAKKVFDQILDKNVVS-----YNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNS 293
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYAELGRW 610
V S+L+AC I G + +++IE + ++ L +MY++ G W
Sbjct: 294 VTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCW 344
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
Q G +A L S LL +C ++ + +H I++ ++ FI LID+Y KCG
Sbjct: 422 QSAGVIASLKS--ITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCG 479
Query: 69 CLYGARKVFDKMSNK--NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
Y AR+VF + K + WN++I SG+
Sbjct: 480 HSYLARRVFCQFQIKPDDPAFWNAMI-------------------------------SGY 508
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR--YSS 184
++ ++ A F +M E + + S LS C+ + + G Q+ ++++ +
Sbjct: 509 GRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPT 568
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+ G ++D+ G+ GR+ A+ + M E ++ + SL+ + ++ E+ ++
Sbjct: 569 SEHFG-CMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKL- 626
Query: 245 ASGIEPDEVTLASVVS 260
S +EP + T ++S
Sbjct: 627 -SELEPQDPTPFVILS 641
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/660 (34%), Positives = 360/660 (54%), Gaps = 69/660 (10%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
+ ++S + +L C +VH +I S F + + N L+ +Y+KCG L+ AR
Sbjct: 242 SMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDAR 301
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
K LF +MP+ D +WN +++G+ Q+ E
Sbjct: 302 K-------------------------------LFNTMPQTDTVTWNGLIAGYVQNGFTDE 330
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A F M S +F S L + S + +VH+ + + R DVY+ SALID
Sbjct: 331 AAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALID 390
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+Y K G V AR++F ++ ++I+ Y +G DA+ F ++ G+ P+ +T
Sbjct: 391 IYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLT 450
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ASV+ ACA+LAA K G ++H +++ ++L N + +G+A+ DMYAKCG+L+ A
Sbjct: 451 MASVLPACAALAALKLGKELHCDILK-KQLENIVNVGSAITDMYAKCGRLDLAY------ 503
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
F +M E + + WN++I+ ++QNG+ E A+ LFR
Sbjct: 504 -------------------------EFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFR 538
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + + L++ ANL L G++ H +V+++ SD FV ++LID
Sbjct: 539 QMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAF------SSDTFVASALID 592
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + +F M ++ VSWN++I +G E L LF +ML G PDHVT
Sbjct: 593 MYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVT 652
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ ++ AC HAGLV EG YF M++E+G+ +HY CMVDL GRAG L EA I++M
Sbjct: 653 FLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSM 712
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P PDA +WG+LL AC++H N+ L + ++ LLE++P NSG YVLLSN++A+ G WG V+
Sbjct: 713 PFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVL 772
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+VR+LM+++GV K PG SWI++ G ++F + HP + EIYL+L L E+++ GYVP
Sbjct: 773 KVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVP 832
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 254/492 (51%), Gaps = 44/492 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
++F +++I G+I DA R+F +P+RD WN M+ G+ + F+ A+G F M
Sbjct: 179 DLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMR 238
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ ++ ++ LS CA F +GTQVH L+ S + D + + L+ MY KCG +
Sbjct: 239 TSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLF 298
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
AR++F+ M + + V+WN LI Y QNG +A +F M+++G++PD VT AS + +
Sbjct: 299 DARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSIL 358
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ + ++H+ ++R ++ D+ L +AL+D+Y K G + AR +F + + +V T
Sbjct: 359 ESGSLRHCKEVHSYIVR-HRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCT 417
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+M+S GY +G N +A+ FR L +E + P
Sbjct: 418 AMIS-------------------------------GYVLHGLNIDAINTFRWLIQEGMVP 446
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L ACA LA L+LG++ H ++K L E+ + VG+++ DMY KCG ++
Sbjct: 447 NSLTMASVLPACAALAALKLGKELHCDILKKQL------ENIVNVGSAITDMYAKCGRLD 500
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
F M E D + WN+MI +QNG A+ LF++M + G K D V++ L + +
Sbjct: 501 LAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAA 560
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ + G++ + + A D + + ++D+ + G L A+ + M + + V
Sbjct: 561 NLPALYYGKEMHGYVIRN---AFSSDTFVASALIDMYSKCGKLALARCVFNLMAGK-NEV 616
Query: 562 IWGSLLAACKVH 573
W S++AA H
Sbjct: 617 SWNSIIAAYGNH 628
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 244/551 (44%), Gaps = 71/551 (12%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
++ L +C + V R+VH +II + + +R++ +Y CG
Sbjct: 44 TTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCG---------- 93
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
I D LF + + WN M+ G F AL +
Sbjct: 94 ---------------------RISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLF 132
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ KM N + +Y+F + AC G + + VH + D+++GSALI +Y
Sbjct: 133 YFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYAD 192
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRVFD + +R+ + WN ++ Y ++G ++A+ F M S + VT +
Sbjct: 193 NGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCI 252
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S CA+ F G Q+H L+ D + N LV MY+KCG L +AR +F+ MP +
Sbjct: 253 LSICATRGKFCLGTQVHG-LVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V+ +++G Y QNG +EA LF +
Sbjct: 312 TVTWNGLIAG-------------------------------YVQNGFTDEAAPLFNAMIS 340
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
V P TF + L + L+ ++ H+++V+H + F D+++ ++LID+Y K
Sbjct: 341 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF------DVYLKSALIDIYFK 394
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G VE +IF+ D AMI G +G +A+ F+ ++ G P+ +TM V
Sbjct: 395 GGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASV 454
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+ ++ G++ + K+ L + + + + D+ + G LD A M +
Sbjct: 455 LPACAALAALKLGKELHCDILKKQ-LENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ET 512
Query: 559 DAVIWGSLLAA 569
D++ W S++++
Sbjct: 513 DSICWNSMISS 523
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/523 (39%), Positives = 306/523 (58%), Gaps = 42/523 (8%)
Query: 158 LSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALI-DMYGKCGRVSCARRVFDGMRER 215
L +CA S FK Q+HA + ++ MG LI + C +S A ++F ++
Sbjct: 46 LLSCASS-KFKF-RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNP 103
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
NI +WN++I Y ++ ALE++ +M S IEPD T ++ A A L +EG ++H
Sbjct: 104 NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVH 163
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ +R + + + N LV MYA CG
Sbjct: 164 SIAIR-NGFESLVFVQNTLVHMYAACGH-------------------------------A 191
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
+SA +F M ERN+V+WN++I GY NG EAL LFR + V P +T +LL+AC
Sbjct: 192 ESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSAC 251
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A L L LGR+AH ++VK GL + ++ GN+L+D+Y KCGS+ ++F+ M E+
Sbjct: 252 AELGALALGRRAHVYMVKVGL------DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK 305
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
VSW ++IVG A NG+G EAL LFK++ G P +T +GVL ACSH G+V+EG YF
Sbjct: 306 SVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYF 365
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
M +E+G+ P +HY CMVDLLGRAG + +A I+ MPMQP+AV+W +LL AC +H +
Sbjct: 366 KRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGH 425
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ LGE +LL++EP +SG YVLLSN+YA RW +V +VR+ M + GV K PG S +E
Sbjct: 426 LALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVE 485
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+ ++ F++ D+ HP +EIY+ L +T+ +K GYVP+ S+
Sbjct: 486 LRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISN 528
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 194/396 (48%), Gaps = 52/396 (13%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A ++F+ + + +WN+M+ G+A+ + AL + +MH +++ L A A
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
+D + G +VH++ ++ + S V++ + L+ MY CG A ++F+ M ERN+V+WNS+
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I Y NG ++AL +F M G+EPD T+ S++SACA L A G + H +++
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKV-G 271
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L +L GNAL+D+YAKCG + +A VFD M ++VVS TS
Sbjct: 272 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTS------------------- 312
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
LI G NG +EAL LF+ L+R+ + P+ TF +L AC
Sbjct: 313 ------------LIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC-------- 352
Query: 404 GRQAHTHVVKHGLRFLS--GEESDIFVG----NSLIDMYMKCGSVEDGCRIFETM-VERD 456
+H +V G + EE I ++D+ + G V+ + M ++ +
Sbjct: 353 ---SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPN 409
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
V W ++ C +G+ ALG + L +P H
Sbjct: 410 AVVWRTLLGACTIHGH--LALGEVARAQLLQLEPKH 443
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 31/300 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + LL + + V + +VH+ I++ F S +F+QN L+ +YA CG
Sbjct: 139 DTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACG--------- 189
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ A +LF M ER+ +WNS+++G+A + R +EAL
Sbjct: 190 ----------------------HAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALT 227
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M ++ S LSACA +G + H + K +++ G+AL+D+Y
Sbjct: 228 LFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYA 287
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +VFD M E+++VSW SLI NG +ALE+F + G+ P E+T
Sbjct: 288 KCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVG 347
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ AC+ EG R+ + + +VD+ + G + +A MP++
Sbjct: 348 VLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQ 407
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 84/215 (39%), Gaps = 45/215 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D LL +C +++ RR H ++K + N L+D+YAKCG + A KV
Sbjct: 240 DGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKV- 298
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F M E+ SW S++ G A + EAL
Sbjct: 299 ------------------------------FDEMEEKSVVSWTSLIVGLAVNGFGKEALE 328
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F ++ + SE +F L AC+ G VD FK + + ++ K +
Sbjct: 329 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHY------G 382
Query: 191 ALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
++D+ G+ G V A M + N V W +L+
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 417
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/659 (34%), Positives = 336/659 (50%), Gaps = 72/659 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKVFDKM 80
LL+S + + R +HA II++ F+ N L+++Y+K L A+ V
Sbjct: 9 LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLT 68
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ V TW S ++SG + RF AL +F
Sbjct: 69 HLRTVVTWTS-------------------------------LISGCVHNRRFLPALLHFT 97
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M +N ++++F A A G Q+H L K DV++G + DMY K G
Sbjct: 98 NMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTG 157
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A +FD M +RN+ +WN+ I+ Q+ + DA+ F + EP+ +T + ++
Sbjct: 158 FRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLN 217
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC + G Q+HA ++RC + D+ + N L+D Y KCG + A VF+R+ R
Sbjct: 218 ACVDMVRLNLGRQLHAFIVRC-GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR--- 273
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+NVVSW +++A QN E E A +F L R+
Sbjct: 274 ---------------------------KNVVSWCSMLAALVQNHEEERACMVF-LQARKE 305
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V PT + ++L+ACA L L+LGR H VK + E +IFVG++L+DMY KCG
Sbjct: 306 VEPTDFMISSVLSACAELGGLELGRSVHALAVK------ACVEDNIFVGSALVDMYGKCG 359
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC--GEKPDHVTMIGV 498
S+E+ ++F + ER+ V+WNAMI G A G AL LF++M L G +P +VT+I +
Sbjct: 360 SIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISI 419
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L CS G VE G + F SM +G+ P +H+ C+VDLLGR+G +D A I+ M +QP
Sbjct: 420 LSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQP 479
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+WG+LL AC++H LG+ A+KL E++ +SG +V+LSNM A GRW E VRK
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+ G+ K G SWI + ++VF KD H N EI +L L MK GYVP+ +
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTN 598
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 156/326 (47%), Gaps = 39/326 (11%)
Query: 4 QRSVKQIVGDLAFL------DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ 57
+RS+ IV FL +S F L++C+ ++ R++HA I++ + ++ +
Sbjct: 188 RRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVA 247
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N LID Y KCG + A VF+++ N+ ++
Sbjct: 248 NGLIDFYGKCGDIVSAEMVFNRIGNR------------------------------KNVV 277
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW SM++ Q+ A F++ E +++ S LSACA ++G VHAL
Sbjct: 278 SWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALA 336
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
K+ ++++GSAL+DMYGKCG + A +VF + ERN+V+WN++I Y G AL
Sbjct: 337 VKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMAL 396
Query: 238 EVFVRMM--ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
+F M + GI P VTL S++S C+ + A + G+QI + + +V
Sbjct: 397 RLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVV 456
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVS 321
D+ + G ++ A M I+ +S
Sbjct: 457 DLLGRSGLVDRAYEFIQNMAIQPTIS 482
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/623 (35%), Positives = 344/623 (55%), Gaps = 60/623 (9%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM-PERDQ 116
N I + G + ARKVF++M +++ W ++ITG LK G I +A +LF +++
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 64
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
+W +MV+G+ + ++ EA F +M N S+ + + A + G AL
Sbjct: 65 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVV----SWNTMVDGYA-----RNGLTQQAL 115
Query: 177 -LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
L + +V + +I +CGR+ A+R+FD M++R++VSW +++ +NG D
Sbjct: 116 DLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVED 175
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
A +F D++ + +VVS NA++
Sbjct: 176 ARALF----------DQMPVRNVVSW------------------------------NAMI 195
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
YA+ +L+EA +F RMP R++ S +M++G+ + + A +F +M E+NV++W A
Sbjct: 196 TGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTA 255
Query: 356 LIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++ GY Q+G +EEAL +F ++L + P TF +L AC++LA L G+Q H + K
Sbjct: 256 MMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISKT 315
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET--MVERDWVSWNAMIVGCAQNGY 472
+ V ++LI+MY KCG + ++F+ + +RD +SWN MI A +GY
Sbjct: 316 VF------QDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGY 369
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G EA+ LF +M G + VT +G+L ACSH GLVEEG KYF + K + +DHY
Sbjct: 370 GKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYA 429
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
C+VDL GRAG L EA +IE + + +WG+LLA C VH N +G+ VA+K+L+IEP
Sbjct: 430 CLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQ 489
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
N+G Y LLSNMYA +G+W E VR M+ G+ KQPGCSWIE+ V VF+V DK H
Sbjct: 490 NAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWIEVGNTVQVFVVGDKPHSQ 549
Query: 653 NKEIYLVLKMLTREMKRVGYVPN 675
+ + +L L +MK+ G +P+
Sbjct: 550 YEPLGHLLHDLHTKMKKAGDMPD 572
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 223/474 (47%), Gaps = 70/474 (14%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM-SNKNVFTWNSIITGLLKWGFID 102
++ + +I + +I Y KCG + ARK+FD+ + KNV TW +++ G +K+ +
Sbjct: 22 KVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVK 81
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
+A RLF MP R+ SWN+MV G+A++ +AL F +M N +S + +AL C
Sbjct: 82 EAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERN-VVSWNTIITALVQCG 140
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
D + L DV + ++ K GRV AR +FD M RN+VSWN+
Sbjct: 141 RIEDAQR-------LFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNA 193
Query: 223 LITCYEQNGPASDALEVFVRM----------MASGI-----------------EPDEVTL 255
+IT Y QN +AL++F RM M +G E + +T
Sbjct: 194 MITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITW 253
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++++ +E L++ +++ +L+ + ++ + L E + + +M
Sbjct: 254 TAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIH-QMI 312
Query: 316 IRNVVSETS-----MVSGYAKASSVKSARLMFTKML--ERNVVSWNALIAGYTQNGENEE 368
+ V +++ +++ Y+K + +AR MF L +R+++SWN +IA Y +G +E
Sbjct: 313 SKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKE 372
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A+ LF ++ VC TF LL AC +HT +V+ G ++ +I
Sbjct: 373 AINLFNEMQELGVCANDVTFVGLLTAC-----------SHTGLVEEGFKYF----DEILK 417
Query: 429 GNS----------LIDMYMKCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQNG 471
S L+D+ + G +++ I E + E ++ W A++ GC +G
Sbjct: 418 NRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHG 471
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 42/268 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
++ F +L +C +++ +++H I K+ F + + LI++Y+KCG L+ ARK+F
Sbjct: 285 NTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMF 344
Query: 78 DK--MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
D +S +++ +WN +I G+ +A LF M E C+
Sbjct: 345 DDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCA----------------- 387
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR---YSSDVYMGSAL 192
++ +F L+AC+ + + G + + K+R D Y + L
Sbjct: 388 --------------NDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHY--ACL 431
Query: 193 IDMYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
+D+ G+ GR+ A + +G+ E + W +L+ +G A V +++ IEP
Sbjct: 432 VDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILK--IEPQ 489
Query: 252 EVTLASVVSAC-ASLAAFKEGLQIHARL 278
S++S AS+ +KE + R+
Sbjct: 490 NAGTYSLLSNMYASVGKWKEAANVRMRM 517
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/652 (32%), Positives = 351/652 (53%), Gaps = 76/652 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF-DKMSNK 83
L SC ++++ +++H+ +I F+ LI++Y+KCG + A VF D +
Sbjct: 17 FLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHER 76
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NVF +N+I +SGF + S+ ++ KM
Sbjct: 77 NVFAYNAI-------------------------------ISGFVSNGLASKGFQFYKKMR 105
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E +Y+F + C ++ K ++H L K DV++GSAL++ Y K G +
Sbjct: 106 LEGVMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVFVGSALVNTYLKNGSME 162
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A++VF + R++V WN++I Y + G +ALEVF RM G+ P T+ ++S A
Sbjct: 163 DAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFA 222
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S G +H +M+ + + + NAL+DMY KC + +A
Sbjct: 223 SRGDLDNGKTVHGIVMKM-GYDSGVSVSNALIDMYGKCKHIGDAL--------------- 266
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
++F + E+++ SWN++I+ + Q G+++ L LF + + P
Sbjct: 267 ----------------IIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP 310
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGL--RFLSGEESDIFVGNSLIDMYMKCGS 441
T +L AC++LA L GR+ H +++ +GL +G ++ V N+++DMY KCGS
Sbjct: 311 DLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGS 370
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ + +IF++M ++D SWN MI+G +GY EALG+F +M KP+ VT++GVL A
Sbjct: 371 MNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSA 430
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C+HAG V GR + + M G+ P +HYTC++D+LGRAG L++A +++ MP+Q + V
Sbjct: 431 CNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPV 490
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W +LL AC++H N L E A+++L++EP + G YVL+SN+Y +GR+ EV+ VRK M+
Sbjct: 491 VWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMK 550
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
++ V K PGCSWIE+ V+VF D+ H L LT ++ +G++
Sbjct: 551 EQNVKKTPGCSWIELKDGVHVFRTGDRTHS-------ELNALTNQLCDIGFI 595
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/685 (31%), Positives = 353/685 (51%), Gaps = 92/685 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S+ + LL C+ + S+ R VH + K+ ++++F+ L++ Y +C AR
Sbjct: 76 VQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCS---AAR-- 130
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
DA RLF MPER+ +W ++V+G+ + + + L
Sbjct: 131 --------------------------DARRLFDGMPERNVVTWTALVTGYTLNSQPALGL 164
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M S Y+ G+ L+AC S D +G QVH K S MG++L +Y
Sbjct: 165 EVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLY 224
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLIT-CYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K G + A R F + E+N+++W ++I+ C E + +F+ M+ G+ P+E TL
Sbjct: 225 AKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTL 284
Query: 256 ASVVSACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
SV+S C + G Q+ A + CE +L + N+ + +Y + G+ +EA +F++
Sbjct: 285 TSVMSLCGTRLDLNLGKQVQAFSFKIGCE---TNLPVKNSTMYLYLRKGETDEAMRLFEQ 341
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE------ 367
M + ++++WNA+I+GY Q ++
Sbjct: 342 ME-------------------------------DASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 368 -----EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+AL +FR LKR + P +TF ++L+ C+ + L+ G Q H +K G FLS
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG--FLS-- 426
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D+ V ++L++MY KCG ++D + F M R +V+W +MI G +Q+G EA+ LF++
Sbjct: 427 --DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEE 484
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M L G +P+ +T + +L ACS+AGLVEE YF M KE+ + P+ DHY CM+D+ R G
Sbjct: 485 MRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLG 544
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
+++A + I+ +P+ IW SL+A C+ H N+ L Y A KLLE++P Y+LL N
Sbjct: 545 RVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLN 604
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MY RW +V RVRKLM++ V SWI I V F D+ HP E+Y +L+
Sbjct: 605 MYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLEN 664
Query: 663 LTREMKRVGYVP-------NASDDE 680
L + K +GY P ++ DDE
Sbjct: 665 LLEKAKAIGYEPYQNAELSDSEDDE 689
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/682 (32%), Positives = 359/682 (52%), Gaps = 85/682 (12%)
Query: 87 TWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-SE 145
T + L + A LF S+P+ D +N +V GF+ +D S ++ + + +
Sbjct: 46 TLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNT 105
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N + +++ A++AC+ M H+++ Y S+V++GSAL+D+Y K RV A
Sbjct: 106 NLSPDNFTYAFAVAACSNDKHL-MLLHAHSIIDG--YGSNVFVGSALVDLYCKFSRVVYA 162
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VFDGM ER+ V WN++I +N D++++F M+A G+ D T+ +V+ A A L
Sbjct: 163 RKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAEL 222
Query: 266 AAFKEGLQIH------------------------------ARLMRCEKLRNDLVLGNA-- 293
K G+ I ARL+ R DL+ NA
Sbjct: 223 QELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMI 282
Query: 294 ---------------------------------LVDMYAKCGKLNEA-----RCVFDRMP 315
L+ +++ G L+ A CV +
Sbjct: 283 SGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGII 342
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ VS T+ + Y K + + AR +F + E+ VV+WNA+I+GYTQNG E A+ LF+
Sbjct: 343 LNPTVS-TAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKE 401
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + P T +L+ACA L L G+ H H++K E +I+V +L+DM
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKS-----ENLEPNIYVSTALVDM 455
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG++ + ++F++M E++ V+WN MI G +GYG EAL L+ +ML G P VT
Sbjct: 456 YAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTF 515
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ VL ACSHAGLV EG + F +M ++ + PL +HY CMVD+LGR+G L++A I+ MP
Sbjct: 516 LSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMP 575
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++P +WG+LL AC +H++ + +++L E++P + G YVLLSN+Y+ + +
Sbjct: 576 VEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAAS 635
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY--- 672
+R++++KR + K PGC+ IE+ G +VF+ D+ H +IY L+ LT +M+ +GY
Sbjct: 636 IRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAE 695
Query: 673 -VPNASDDEAYEEQNGSNSTSD 693
VP D E E++ N S+
Sbjct: 696 TVPALHDVEEEEKELAVNVHSE 717
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 203/462 (43%), Gaps = 71/462 (15%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+++V D +DSS +L + + + + +K F ++ LI +Y+KC
Sbjct: 198 REMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC 257
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
G + AR +F +++ ++ +N++I+G G + + +LF + + +S + G
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVG-- 315
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
+ +HS FG AC+ +H KS +
Sbjct: 316 -----------LIPLHS--------PFGHLHLACS----------IHGFCVKSGIILNPT 346
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +A +Y K + AR +FD E+ +V+WN++I+ Y QNG A+ +F MM +
Sbjct: 347 VSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE 406
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
P+ VT+ +++SACA L + G +H L++ E L ++ + ALVDMYAKCG ++EA
Sbjct: 407 FTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEA 465
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+FD M +N V+ WN +I GY +G
Sbjct: 466 WQLFDSMSEKNTVT-------------------------------WNTMIFGYGLHGYGH 494
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSGEESDI 426
EAL L+ + P+ TF ++L AC++ + G + H V K+ + L +
Sbjct: 495 EALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYA-- 552
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G +E + M VE W ++ C
Sbjct: 553 ----CMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGAC 590
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/621 (34%), Positives = 330/621 (53%), Gaps = 67/621 (10%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQ-----CSWNSMVSGFAQHDRFSEALGYFV 140
F +N++++ + G +DDA LF S+ D +WN+MVS Q R EA+
Sbjct: 201 FAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIY 260
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKC 199
M + +F SAL AC+ +G ++HA +L S +++ ++ SAL+DMY
Sbjct: 261 DMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASH 320
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLA 256
RV ARRVFD + R + WN+++ Y Q G +ALE+F RM A +G+ P E T+A
Sbjct: 321 ERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIA 380
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ ACA F +H +++ N V NAL+D+YA+ G +
Sbjct: 381 GVLPACARSETFAGKEAVHGYVLKRGMADNPFV-QNALMDLYARLGDM------------ 427
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++AR +F + R+VVSWN LI G G +A L R +
Sbjct: 428 -------------------EAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREM 468
Query: 377 KR------------------ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
++ E V P + T LL CA LA G++ H + ++H L
Sbjct: 469 QQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHAL-- 526
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+SDI VG++L+DMY KCG + +F+ + +R+ ++WN +I+ +G G EA+
Sbjct: 527 ----DSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIA 582
Query: 479 LFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF +M++ E KP+ VT I L ACSH+G+V+ G + F SM + HG+ P D + C VD+
Sbjct: 583 LFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDI 642
Query: 538 LGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LGRAG LDEA ++I +M P + W S L AC++HRN+ LGE A++L ++EP +
Sbjct: 643 LGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASH 702
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLL N+Y+ G W + VR MR+RGV K+PGCSWIE+ G ++ FM + HP + +
Sbjct: 703 YVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLV 762
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
+ + L M+ GY P+ S
Sbjct: 763 HAHMDALWERMRNQGYTPDTS 783
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 248/533 (46%), Gaps = 68/533 (12%)
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
++GA D + N+++T + G + A LF +MP RD ++NS+++
Sbjct: 81 IHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLF 140
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRY--SSDV 186
R+ AL M E LS ++ S L AC+ + D ++G + HA K+ + +
Sbjct: 141 RRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDER 200
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERN-----IVSWNSLITCYEQNGPASDALEVFV 241
+ +AL+ MY + G V A+ +F + + +V+WN++++ Q+G +A+EV
Sbjct: 201 FAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIY 260
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M+A G+ PD +T AS + AC+ L G ++HA +++ L + + +ALVDMYA
Sbjct: 261 DMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASH 320
Query: 302 GKLNEARCVFDRMP--IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
++ AR VFD +P R + +MV GYA+A
Sbjct: 321 ERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQA--------------------------- 353
Query: 360 YTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G +EEAL LF ++ E+ V P+ T +L ACA H +V+K G+
Sbjct: 354 ----GMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGM-- 407
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ FV N+L+D+Y + G +E IF + RD VSWN +I GC G+ +A
Sbjct: 408 ----ADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463
Query: 479 LFKKMLLCGE------------------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
L ++M G P++VT++ +L C+ +G K +
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKG-KEIHGYAM 522
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H L + +VD+ + GCL ++ + + +P + + + W L+ A +H
Sbjct: 523 RHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKR-NVITWNVLIMAYGMH 574
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 237/536 (44%), Gaps = 99/536 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D FA L +C + + +S R +HA ++K S A+ F+ + L+D+YA + AR+V
Sbjct: 270 DGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRV 329
Query: 77 FDKMS--NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
FD + ++ + WN+++ G + G ++A LFA M E
Sbjct: 330 FDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARM----------------------E 367
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A V SE + L ACA S F VH + K + + ++ +AL+D
Sbjct: 368 AEAGVVP--------SETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMD 419
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG------- 247
+Y + G + AR +F + R++VSWN+LIT G DA ++ M G
Sbjct: 420 LYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATT 479
Query: 248 -----------IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+ P+ VTL +++ CA LAA +G +IH MR L +D+ +G+ALVD
Sbjct: 480 EDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR-HALDSDIAVGSALVD 538
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAKCG L +R VFDR+P RN V++WN L
Sbjct: 539 MYAKCGCLALSRAVFDRLPKRN-------------------------------VITWNVL 567
Query: 357 IAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
I Y +G +EA+ LF R++ P TF L AC++ + G + + H
Sbjct: 568 IMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGME-----LFHS 622
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGYG 473
++ G + + +D+ + G +++ I +M E+ +W++ + C +
Sbjct: 623 MKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRL--HR 680
Query: 474 TEALGLFKKMLLCGEKPDHVTMIGVLCAC-SHAGLVEEGRKYFSSM-----SKEHG 523
LG L +PD + +LC S AGL E+ + + M SKE G
Sbjct: 681 NVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPG 736
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 42/312 (13%)
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-DLVLGNALVDMYAKCGKLNEARC 309
D L + A+L + IH +R + L + NAL+ YA+CG L A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+F+ MP R+ V+ S++ +A +F + L A
Sbjct: 118 LFNAMPSRDAVTFNSLI----------AALCLFRRWL---------------------PA 146
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLA-DLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
L R + E + +T ++L AC++LA DL+LGR+AH +K+G FL G+E F
Sbjct: 147 LDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNG--FLDGDER--FA 202
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERD-----WVSWNAMIVGCAQNGYGTEALGLFKKM 483
N+L+ MY + G V+D +F ++ D V+WN M+ Q+G EA+ + M
Sbjct: 203 FNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDM 262
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
+ G +PD +T L ACS ++ GR+ + + K+ LA + +VD+
Sbjct: 263 VARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHER 322
Query: 544 LDEAKTLIEAMP 555
+ A+ + + +P
Sbjct: 323 VGVARRVFDMVP 334
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 301/497 (60%), Gaps = 26/497 (5%)
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR++FD + E ++ SWN + Y + + +++ M+ ++PD T +
Sbjct: 62 GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD------- 312
A + G ++H +++ L +++ NAL++MY+ CG ++ AR +FD
Sbjct: 122 KGFTRSVALQLGRELHCHVVK-YGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDV 180
Query: 313 -----------RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
R+ ++V+S T++V+G+ V +AR F KM ER+ VSW A+I GY
Sbjct: 181 VTWNAMISGYNRIK-KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYL 239
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+ +EAL LFR ++ + P +T ++L ACA L L+LG T++ K+ ++
Sbjct: 240 RLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVK---- 295
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+D FVGN+LIDMY KCG+VE IF T+ +RD +W AM+VG A NG G EAL +F
Sbjct: 296 --NDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFS 353
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+ML PD VT +GVL AC+H G+V+EG+K+F+SM+ HG+ P HY CMVDLLG+A
Sbjct: 354 QMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKA 413
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G L EA +I+ MPM+P++++WG+LL AC++H++ + E +++LE+EP+N YVL
Sbjct: 414 GHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQC 473
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
N+YA +W ++ +R++M RG+ K PGCS IE+ G V+ F+ D+ HP KEIY L
Sbjct: 474 NIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLN 533
Query: 662 MLTREMKRVGYVPNASD 678
+T ++K GY PN S+
Sbjct: 534 KMTSDLKIAGYSPNTSE 550
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 17/317 (5%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L RS ++ R +H ++K S +F N LI++Y+ CG + AR +F
Sbjct: 113 DCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIF 172
Query: 78 DKMSNKNVFTWNS-----------------IITGLLKWGFIDDASRLFASMPERDQCSWN 120
D +V TWN+ I+TG + G +D A + F MPERD SW
Sbjct: 173 DMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWT 232
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+M+ G+ + + + EAL F +M + E++ S L+ACA ++G + + K+
Sbjct: 233 AMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKN 292
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ +D ++G+ALIDMY KCG V A +F+ + +R+ +W +++ NG +AL +F
Sbjct: 293 KVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMF 352
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+M+ + + PDEVT V+SAC EG + A + + ++ +VD+ K
Sbjct: 353 SQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGK 412
Query: 301 CGKLNEARCVFDRMPIR 317
G L EA + MP++
Sbjct: 413 AGHLKEAHEIIKNMPMK 429
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 219/478 (45%), Gaps = 80/478 (16%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVF 77
+P L ++C KS+ +++H+R IK+ IQN+++ + G + AR++F
Sbjct: 15 NPPLSLFETC---KSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLF 71
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFS 133
D + +VF+WN + G + L+ M ER D ++ + GF + S
Sbjct: 72 DTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR----S 127
Query: 134 EALGYFVKMH-------------SENFALSEYSFGSALSACAGSVDFKMGTQV---HALL 177
AL ++H + N ++ YS + G D + V +A++
Sbjct: 128 VALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMI 187
Query: 178 S-KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
S +R DV +A++ + G+V AR+ F M ER+ VSW ++I Y + +A
Sbjct: 188 SGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEA 247
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
L +F M S I+PDE T+ SV++ACA L A + G I + + K++ND +GNAL+D
Sbjct: 248 LMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDK-NKVKNDTFVGNALID 306
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY KCG + A +F+ +P R+ + T+MV G A
Sbjct: 307 MYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLA-------------------------- 340
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
NG EEAL +F + + SV P T+ +L+AC HT +V G
Sbjct: 341 -----INGCGEEALNMFSQMLKASVTPDEVTYVGVLSAC-----------THTGMVDEGK 384
Query: 417 RFLS------GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+F + G E +I ++D+ K G +++ I + M ++ + + W A++ C
Sbjct: 385 KFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGAC 442
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/662 (33%), Positives = 338/662 (51%), Gaps = 80/662 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL CL ++S S+T+ VH ++K+ F+ + L++VYAKCG +
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM----------- 118
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+DA R+F +M R+ +W +++ GF Q+ + A+ F +
Sbjct: 119 --------------------EDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQE 158
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S Y+ + L AC+ K+G Q HA + K D +GSAL +Y KCGR
Sbjct: 159 MLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGR 218
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A + F +RE+N++SW S ++ NG L +FV M+A I+P+E TL S +S
Sbjct: 219 LEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQ 278
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C + + + G Q+++ ++ ++L + N+L+ +Y K G C+ +
Sbjct: 279 CCEILSLELGTQVYSLCIKF-GYESNLRVRNSLLYLYLKSG------CIVE--------- 322
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-----------NEEAL 370
A +F +M + ++V+WNA+IAG+ Q E EAL
Sbjct: 323 ----------------AHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEAL 366
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF L + P +T ++L+ C+ + ++ G Q H +K G FLS D+ V
Sbjct: 367 KLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTG--FLS----DVIVST 420
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY KCGS+E + F M R ++W +MI G +Q+G +AL +F+ M L G +P
Sbjct: 421 SLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRP 480
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ VT +GVL ACSHAG+V + YF M K++ + P DHY CMVD+ R G L++A
Sbjct: 481 NAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNF 540
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ M +P IW + +A CK H N+ LG Y A++LL ++P + YVLL NMY R+
Sbjct: 541 IKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERF 600
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+V RVRK+M + V K SWI I V F K HP + I L+ L ++K V
Sbjct: 601 EDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNV 660
Query: 671 GY 672
GY
Sbjct: 661 GY 662
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 58/265 (21%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L C R ++ ++HA+ IK+ F S++ + LI +Y+KCG + A K F
Sbjct: 380 DLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAF 439
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM-------------------------- 111
+MS + + W S+ITG + G A +F M
Sbjct: 440 LEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVS 499
Query: 112 ----------------PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFG 155
P D + MV F + R +AL + KM N+ SE+ +
Sbjct: 500 QALNYFEIMQKKYKIKPAMDH--YECMVDMFVRLGRLEQALNFIKKM---NYEPSEFIWS 554
Query: 156 SALSACAGSVDFKMG-TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+ ++ C + ++G LLS + Y+ L++MY R RV M E
Sbjct: 555 NFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYV--LLLNMYLSAERFEDVSRVRKMMEE 612
Query: 215 RNI-----VSWNSL---ITCYEQNG 231
+ SW S+ + ++ NG
Sbjct: 613 EKVGKLKDWSWISIKDKVYSFKTNG 637
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/566 (36%), Positives = 313/566 (55%), Gaps = 40/566 (7%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT 171
P R+ SW S++SG AQ+ FS AL F +M E ++++F A A A G
Sbjct: 19 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 78
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+HAL K DV++G + DMY K AR++FD + ERN+ +WN+ I+ +G
Sbjct: 79 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 138
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+A+E F+ P+ +T + ++AC+ G+Q+H ++R D+ +
Sbjct: 139 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR-SGFDTDVSVC 197
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N L+D Y KC + ++S+ ++FT+M +N V
Sbjct: 198 NGLIDFYGKCKQ-------------------------------IRSSEIIFTEMGTKNAV 226
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW +L+A Y QN E+E+A L+ +++ V + + ++L+ACA +A L+LGR H H
Sbjct: 227 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 286
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK + E IFVG++L+DMY KCG +ED + F+ M E++ V+ N++I G A G
Sbjct: 287 VKACV------ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 340
Query: 472 YGTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
AL LF++M CG P+++T + +L ACS AG VE G K F SM +G+ P +
Sbjct: 341 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 400
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI 589
HY+C+VD+LGRAG ++ A I+ MP+QP +WG+L AC++H LG A+ L ++
Sbjct: 401 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 460
Query: 590 EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKR 649
+P +SG +VLLSN +A GRW E VR+ ++ G+ K G SWI + V+ F KD+
Sbjct: 461 DPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRS 520
Query: 650 HPLNKEIYLVLKMLTREMKRVGYVPN 675
H LNKEI L L EM+ GY P+
Sbjct: 521 HILNKEIQTTLAKLRNEMEAAGYKPD 546
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 38/398 (9%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF S K DDA +LF +PER+ +WN+ +S R EA+ F++
Sbjct: 92 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 151
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + +F + L+AC+ + +G Q+H L+ +S + +DV + + LID YGKC ++
Sbjct: 152 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 211
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
+ +F M +N VSW SL+ Y QN A +++R +E + ++SV+SACA
Sbjct: 212 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 271
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+A + G IHA ++ R + +G+ALVDMY KCG + ++ FD MP +N+V+
Sbjct: 272 GMAGLELGRSIHAHAVKACVERT-IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 330
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++ GYA V A +F +M R G T P
Sbjct: 331 SLIGGYAHQGQVDMALALFEEMAPRG--------CGPT---------------------P 361
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+ TF +LL+AC+ ++ G + + +R G E + ++DM + G VE
Sbjct: 362 NYMTFVSLLSACSRAGAVENGMK-----IFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 416
Query: 444 DGCRIFETMVERDWVS-WNAMIVGCAQNGYGTEALGLF 480
+ M + +S W A+ C +G LGL
Sbjct: 417 RAYEFIKKMPIQPTISVWGALQNACRM--HGKPQLGLL 452
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 184/434 (42%), Gaps = 70/434 (16%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY K AR V RN+VSW SLI+ QNG S AL F M G+ P++ T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
A ASL G QIHA ++C ++ D+ +G + DMY K ++AR +FD +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRIL-DVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ERN+ +WNA I+ +G EA+ F
Sbjct: 120 P-------------------------------ERNLETWNAFISNSVTDGRPREAIEAFI 148
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+R P TF LNAC++ L LG Q HGL SG ++D+ V N LID
Sbjct: 149 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL------HGLVLRSGFDTDVSVCNGLID 202
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KC + IF M ++ VSW +++ QN +A L+ + +
Sbjct: 203 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 262
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY----TCMVDLLGRAGCLDEAKTL 550
+ VL AC+ +E GR + H + + + +VD+ G+ GC+++++
Sbjct: 263 ISSVLSACAGMAGLELGRSIHA-----HAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 317
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL--------EIEPSNSGP---YVL 599
+ MP + V RN ++G Y + + E+ P GP Y+
Sbjct: 318 FDEMPEKN------------LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 365
Query: 600 LSNMYAELGRWGEV 613
++ + R G V
Sbjct: 366 FVSLLSACSRAGAV 379
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 33/306 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F L++C ++ ++H +++S F +++ + N LID Y KC + + +F
Sbjct: 158 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 217
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M KN SW S+V+ + Q+ +A
Sbjct: 218 TEMGTKNAV-------------------------------SWCSLVAAYVQNHEDEKASV 246
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+++ + S++ S LSACAG ++G +HA K+ +++GSAL+DMYG
Sbjct: 247 LYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYG 306
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI--EPDEVTL 255
KCG + + + FD M E+N+V+ NSLI Y G AL +F M G P+ +T
Sbjct: 307 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 366
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++SAC+ A + G++I + + + +VDM + G + A +MP
Sbjct: 367 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 426
Query: 316 IRNVVS 321
I+ +S
Sbjct: 427 IQPTIS 432
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
RS K IV F+ SS +L +C + R +HA +K+ IF+ + L+D+Y
Sbjct: 250 RSRKDIVETSDFMISS----VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 305
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
KCGC+ + + FD+M KN+ T NS+I G G +D A LF M R
Sbjct: 306 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 355
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 313/558 (56%), Gaps = 35/558 (6%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
++N+++SGF + E ++ KM +E +++F A+ AC ++ K ++H LL
Sbjct: 106 AFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIHGLL 162
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
K DV++GSAL++ Y K G + A+ F+ + R++V WN+++ Y Q G L
Sbjct: 163 FKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVL 222
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
E F RM + P T+ +S A + G IH M+ + + + N+L+DM
Sbjct: 223 ETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKM-GYDSGVAVSNSLIDM 281
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KC +C+ D + I F M E+++ SWN+++
Sbjct: 282 YGKC------KCIEDALEI-------------------------FEMMREKDIFSWNSIV 310
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+ + Q G+++ L L + + P T +L AC++LA L GR+ H +++ GL
Sbjct: 311 SVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLG 370
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ D+ + N++IDMY KCGS+ D +FE M +D SWN MI+G +GYG EAL
Sbjct: 371 KDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEAL 430
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M KPD VT +GVL ACSHAG V +GR + M ++ +AP +HYTC++D+
Sbjct: 431 EMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDM 490
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG LDEA L MP++ + V+W +LLAAC++H++ +L E A+++ E+EP + G Y
Sbjct: 491 LGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSY 550
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VL+SN+Y +GR+ EV+ VR MR++ V K PGCSWIE+ V+VF+ D+ HP IY
Sbjct: 551 VLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIY 610
Query: 658 LVLKMLTREMKRVGYVPN 675
L LT + GYVP+
Sbjct: 611 AGLNSLTARLXEHGYVPD 628
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 196/396 (49%), Gaps = 54/396 (13%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+VF ++++ LK+G ++ A F +P RD WN+MV+G+AQ +F L F +M+
Sbjct: 170 DVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMN 229
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
E+ S ++ LS A D G +H K Y S V + ++LIDMYGKC +
Sbjct: 230 DESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIE 289
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A +F+ MRE++I SWNS+++ +EQ G L + RM+ +GI+PD VT+ +V+ AC+
Sbjct: 290 DALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACS 349
Query: 264 SLAAFKEGLQIHARLM-----RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
LAA G +IH ++ + K +D++L NA++DMYAKCG + +A VF+RM ++
Sbjct: 350 HLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKD 409
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V S M+ GY +G EAL +F +
Sbjct: 410 VASWNIMIMGYG-------------------------------MHGYGNEALEMFSRMCE 438
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL------ 432
+ P TF +L+AC +H V G FL +S V ++
Sbjct: 439 VQLKPDEVTFVGVLSAC-----------SHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
IDM + G +++ + TM +E + V W A++ C
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAAC 523
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 37/289 (12%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+++ R +H +K + S + + N LID+Y KC C+ A ++F+ M K++F+WNSI++
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+ G D RL + M+ Q D +
Sbjct: 313 HEQCGDHDGTLRLL-----------DRMLGAGIQPDLV--------------------TV 341
Query: 155 GSALSACAGSVDFKMGTQVHALLSKS------RYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ L AC+ G ++H + S + DV + +A+IDMY KCG + A V
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M +++ SWN +I Y +G ++ALE+F RM ++PDEVT V+SAC+
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+G ++ + + ++DM + G+L+EA + MPI
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 17/225 (7%)
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
E NV ++NA+I+G+ NG EE ++ ++ E V P +TF + AC ++ +++
Sbjct: 101 EINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---- 156
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
HGL F G E D+F+G++L++ Y+K G +E FE + RD V WNAM+ G
Sbjct: 157 -----KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNG 211
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR---KYFSSMSKEHG 523
AQ G L F++M P T+ G L + G + GR + M + G
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+A ++D+ G+ C+++A + E M + D W S+++
Sbjct: 272 VAV----SNSLIDMYGKCKCIEDALEIFEMM-REKDIFSWNSIVS 311
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 2 ATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA------SEIF 55
T R + +++G D +L +C ++ R +H +I S ++
Sbjct: 321 GTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVL 380
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
++N +ID+YAKCG + A VF++MSNK+V +WN +I
Sbjct: 381 LKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIM---------------------- 418
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
G+ H +EAL F +M E +F LSAC+ + G
Sbjct: 419 ---------GYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLV 469
Query: 176 LLSKSRY--SSDVYMGSALIDMYGKCGRVSCARRVFDGMR-ERNIVSWNSLIT 225
+ KS+Y + + + +IDM G+ G++ A + M E N V W +L+
Sbjct: 470 QM-KSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 336/642 (52%), Gaps = 78/642 (12%)
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
L+K G + DA LF MP ++ +W S++SG+ ++ R AL F M A ++++
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+AL ACA + G QVH+L ++ ++ D ++GS LI+MY +CG + A+ VFD M
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++V + SLI+ + +NG A E ++M+ G++P+E T+ ++++AC + G QI
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQI 233
Query: 275 HARLMRCEKLRNDLVLGN-ALVDMYA-------------------------------KCG 302
H L++ LR+ V + AL+D Y+ + G
Sbjct: 234 HGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDG 293
Query: 303 KLNEARCVFDRM------P------------------------------IRNVVSETSMV 326
+L EA VF M P I ++ +++
Sbjct: 294 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALL 353
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
S Y + V+ M K+ ++VSW I+ QNG E+A+ L + E P Y
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGY 413
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
F ++L++CA++A L G Q H +K G +S+I GN+LI+MY KCG +
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGC------DSEICTGNALINMYSKCGQMGSAR 467
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
F+ M D SWN++I G AQ+G +AL +F KM G KPD T +GVL C+H+G
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
+VEEG +F M ++ P HY CM+D+LGR G DEA +I MP +PDA+IW +L
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LA+CK+HRN+ +G+ A +L+E+ +S YVL+SN+YA G W + +VR+ M + GV
Sbjct: 588 LASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVK 647
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
K GCSWIEI V+ F +D HP + IY +L L M+
Sbjct: 648 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 689
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 212/482 (43%), Gaps = 101/482 (20%)
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
S DV + ++ K GR++ A +FD M +N+V+W S+++ Y +NG AL +F
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ SG+ P++ + + ACA L A + G Q+H+ +R D +G+ L++MY++CG
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRA-GFAGDAWIGSCLIEMYSRCG 163
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE--------------- 347
L A+ VFDRM +VV TS++S + + + A +ML+
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223
Query: 348 ----------------------RNVVSWNALIAGYTQNGEN------------------- 366
++V S ALI Y++NGE
Sbjct: 224 ACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWC 283
Query: 367 ------------EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
EEAL +F + E V P + +L AC ++ LGRQ H +KH
Sbjct: 284 SMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKH 340
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
L +DI V N+L+ MY + G VE+ + + D VSW I QNG+G
Sbjct: 341 DLI------TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGE 394
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK---DHY 531
+A+ L +M G P+ VL +C+ +++G ++ H LA LK D
Sbjct: 395 KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF-------HCLA-LKLGCDSE 446
Query: 532 TC----MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
C ++++ + G + A+ + M D W SL +H + G+ A K L
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSL-----IHGHAQHGD--ANKAL 498
Query: 588 EI 589
E+
Sbjct: 499 EV 500
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L SC S+ + H +K SEI N LI++Y+KCG + AR FD M
Sbjct: 415 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 474
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G AQH ++AL F K
Sbjct: 475 THDVTSWNSLI-------------------------------HGHAQHGDANKALEVFSK 503
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL-SKSRYSSDVYMGSALIDMYGKCG 200
M S + +F L C S + G L+ + ++ + +IDM G+ G
Sbjct: 504 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 563
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLIT 225
R A R+ + M E + + W +L+
Sbjct: 564 RFDEALRMINDMPFEPDALIWKTLLA 589
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
E D+ + ++ +K G + D +F+ M ++ V+W +++ G +NG AL +F
Sbjct: 43 AESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMF 102
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
M+ G P+ L AC+ G + G + S++ G A +C++++ R
Sbjct: 103 ADMVESGVAPNDFACNAALVACADLGALRAGEQ-VHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G L AK + + M PD V + SL++A
Sbjct: 162 CGSLPAAKEVFDRMD-SPDVVGYTSLISA 189
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 312/526 (59%), Gaps = 40/526 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ S L+ C + G +VH + K+ Y VY+ + LI +Y KC + AR +FD M
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+RN+VSW ++I+ Y Q G A +AL +FV M+ S EP+ T A+++++C F+ G Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH+ ++ + + +G++L+DMYAK G++ +A VF +P
Sbjct: 185 IHSIAIK-RNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP------------------ 225
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
ER+VV+ A+I+GY Q G +EEAL LFR L+ E + T+ ++L
Sbjct: 226 -------------ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLT 272
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + LA L G+Q H+HV++ SG+ S + + NSLIDMY KCG+V RIF++M
Sbjct: 273 ALSGLAALNHGKQVHSHVLR------SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 326
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGR 512
ER +SWNAM+VG +++G E L LFK M + KPD +T + VL CSH L + G
Sbjct: 327 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 386
Query: 513 KYFSSM-SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ F +M + + G+ P HY C+VDLLGRAG ++EA I+ MP P A IWGSLL +C+
Sbjct: 387 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCR 446
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH ++ +G V +KLLE+EP N+G YV+LSN+YA G+W ++ +R LM+++ V K+PG
Sbjct: 447 VHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGR 506
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+E+ V+ F D HP +E+ +K L+ + K GYVP+ S
Sbjct: 507 SWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKEDGYVPDLS 552
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 247/492 (50%), Gaps = 90/492 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L+ C+ +++ + +RVH +IK+ + ++++ RLI +Y KC CL AR +FD+M
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEM- 123
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P+R+ SW +M+S ++Q EAL FV+
Sbjct: 124 ------------------------------PQRNVVSWTAMISAYSQRGFAFEALNLFVE 153
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + ++F + L++C GS+ F+ G Q+H++ K Y S +++GS+L+DMY K GR
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 213
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF + ER++V+ ++I+ Y Q G +AL++F ++ G+ + VT ASV++A
Sbjct: 214 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LAA G Q+H+ ++R + + +VL N+L+DMY+KCG + AR +FD MP R +S
Sbjct: 274 LSGLAALNHGKQVHSHVLRSGQY-SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCIS 332
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVV-----SWNALIAGYTQ-------------- 362
+M+ GY+K + +F M E N V ++ A+++G +
Sbjct: 333 WNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 392
Query: 363 -NGEN--EEALG-----------------LFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
NG++ E +G F +K+ PT +G+LL +C +D++
Sbjct: 393 VNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 452
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI--DMYMKCGSVEDGCRIFETMVE------ 454
+G + G + L E + GN +I ++Y G ED I + M E
Sbjct: 453 IG-------IIVGQKLLELEPEN--AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKE 503
Query: 455 --RDWVSWNAMI 464
R WV + ++
Sbjct: 504 PGRSWVELDQIV 515
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 147/343 (42%), Gaps = 61/343 (17%)
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+G+ +EAL +L RE + ++LN C + ++ G++ HTH++K +
Sbjct: 43 SGQLKEALLQMAILGREV---KFEGYDSILNECVSQRAIREGQRVHTHMIK------TCY 93
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+++ LI +Y KC + D +F+ M +R+ VSW AMI +Q G+ EAL LF +
Sbjct: 94 LPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVE 153
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE--------------------- 521
ML +P+H T +L +C + E GR+ S K
Sbjct: 154 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 213
Query: 522 ----HGL---APLKDHYTCMVDLLGRA--GCLDEAKTLIEAMP---MQPDAVIWGSLLAA 569
HG+ P +D C + G A G +EA L + M ++V + S+L A
Sbjct: 214 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 273
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN----MYAELGRWGEVVRVRKLMRKRGV 625
+ G+ V +L S YV+L N MY++ G R+ M +R
Sbjct: 274 LSGLAALNHGKQVHSHVLR---SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 330
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+ SW N +V +H + +E+ + K++ E K
Sbjct: 331 I-----SW-------NAMLVGYSKHGMAREVLELFKLMREENK 361
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 125/309 (40%), Gaps = 72/309 (23%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +A +L + +++ ++VH+ +++S S + + N LID+Y+KCG + AR++F
Sbjct: 263 NSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIF 322
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M + +WN+++ G K G + LF M E ++ +S+
Sbjct: 323 DSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI--------------- 367
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV--HALLSKSRYSSDVYMGSALIDM 195
++ + LS C+ MG ++ + + K D+ ++D+
Sbjct: 368 ---------------TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDL 412
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
G+ GRV A FD +++ V P
Sbjct: 413 LGRAGRVEEA---FDFIKKMPFV-------------------------------PTAAIW 438
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLR--NDLVLGNALVDMYAKCGKLNEARCVFDR 313
S++ +C + + G+ + +L+ E N ++L N +YA GK + R + D
Sbjct: 439 GSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN----LYASAGKWEDMRNIRDL 494
Query: 314 MPIRNVVSE 322
M + V E
Sbjct: 495 MQEKAVTKE 503
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 336/662 (50%), Gaps = 80/662 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL CL +S S T+ VH ++K+ F+ + L++VYAKCG +
Sbjct: 67 YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM----------- 115
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+DA R+F +MP R+ +W +++ GF Q+ + A+ F +
Sbjct: 116 --------------------EDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQE 155
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S Y+ + L AC+ K+G Q HA + K D +GSAL +Y KCGR
Sbjct: 156 MLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGR 215
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A + F +RE+N++SW S ++ NG L +FV M++ I+P+E TL S +S
Sbjct: 216 LEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQ 275
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C + + + G Q+ + ++ ++L + N+L+ +Y K G + EA F+R
Sbjct: 276 CCEIPSLELGTQVCSLCIKF-GYESNLRVRNSLLYLYLKSGFIVEAHRFFNR-------- 326
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-----------NEEAL 370
M + ++V+WNA+IAG+ Q E EAL
Sbjct: 327 -----------------------MDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEAL 363
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F L + + P +T ++L+ C+ + ++ G Q H +K G FLS D+ V
Sbjct: 364 KIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTG--FLS----DVIVST 417
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY KCGS+E + F M R ++W +MI G +Q+G +AL +F+ M L G +P
Sbjct: 418 SLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRP 477
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ VT +GVL ACSHAG+V + YF M K++ + P+ DHY CMVD+ R G L++A
Sbjct: 478 NTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNF 537
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ M +P IW + +A C+ H N+ LG Y +++LL ++P + YVLL NMY R+
Sbjct: 538 IKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRF 597
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+V RVRK+M V K SWI I V F DK HP + I L+ L + K +
Sbjct: 598 DDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNL 657
Query: 671 GY 672
GY
Sbjct: 658 GY 659
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L C R ++ ++HA+ IK+ F S++ + LI +Y KCG + A K F
Sbjct: 377 DLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAF 436
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+MS + + W S+ITG + G A +F M + ++ ++S + S
Sbjct: 437 LEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVS 496
Query: 134 EALGYFVKMHSE 145
+AL YF M +
Sbjct: 497 QALNYFEIMQKK 508
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/481 (41%), Positives = 295/481 (61%), Gaps = 10/481 (2%)
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A ++FD + + + +N LI Y +GP ++ +M G P+E + + SA
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CASL++ ++G +H ++ D+ ALVDMYAK G L+ AR FD M +R+V +
Sbjct: 92 CASLSSHQQGRMLHTHFVK-SGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPT 150
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
SM++GYA+ ++ A +F M RNV SW A+I+GY QNG+ +AL +F +++ E+
Sbjct: 151 WNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETE 210
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P T ++L ACANL L++G + + +G +++V N+L++MY +CG
Sbjct: 211 MRPNEVTLASVLPACANLGALEVGERIEVYARGNGYF------KNLYVSNALLEMYARCG 264
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ +FE + R+ SWN+MI+G A +G EA+ LF KML G PD VT +GVL
Sbjct: 265 RIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVL 324
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G+V EG+ +F SM ++ +AP +HY CMVDLLGRAG L EA LI MPM+PD
Sbjct: 325 LACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPD 384
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+V+WG+LL AC H ++ L E A L E+EPSN G YV+LSN+YA GRW V R+RKL
Sbjct: 385 SVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKL 444
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
M+ + K G S+IE GH++ F+V+D+ H + EIY +L ++ +MK G V N SD
Sbjct: 445 MKGGKITKAAGYSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNV-NDSDS 503
Query: 680 E 680
E
Sbjct: 504 E 504
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 161/297 (54%), Gaps = 2/297 (0%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L +C S R +H +KS F ++F L+D+YAK G L ARK FD+M+
Sbjct: 85 FTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMT 144
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V TWNS+I G + G ++ A LF MP R+ SW +M+SG+AQ+ ++++AL F+
Sbjct: 145 VRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLM 204
Query: 142 MHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M E +E + S L ACA ++G ++ + Y ++Y+ +AL++MY +CG
Sbjct: 205 MEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCG 264
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
R+ A VF+ + RN+ SWNS+I +G +A+E+F +M+ G PD+VT V+
Sbjct: 265 RIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVL 324
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC EG + R + L +VD+ + G+L EA + RMP+
Sbjct: 325 LACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPM 381
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 185/422 (43%), Gaps = 83/422 (19%)
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
+I LL+ I A +LF +P+ +N ++ ++ H + + +M + + +
Sbjct: 22 LIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
E+SF SACA + G +H KS + DV+ +AL+DMY K G +S AR+ FD
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRM----------MASG------------- 247
M R++ +WNS+I Y + G ALE+F M M SG
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 248 ---------IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+ P+EVTLASV+ ACA+L A + G +I R +L + NAL++MY
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV-YARGNGYFKNLYVSNALLEMY 260
Query: 299 AKCGKLNEARCVFDRMP-IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
A+CG++++A VF+ + RN+ S SM+ G A
Sbjct: 261 ARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAV-------------------------- 294
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+G +EA+ LF + RE P TF +L AC H +V G
Sbjct: 295 -----HGRCDEAIELFYKMLREGAAPDDVTFVGVLLAC-----------THGGMVVEGQH 338
Query: 418 FLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQN 470
F E D + L +D+ + G + + + M +E D V W ++ C+ +
Sbjct: 339 FFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFH 398
Query: 471 GY 472
G+
Sbjct: 399 GH 400
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/473 (41%), Positives = 284/473 (60%), Gaps = 5/473 (1%)
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R VF + N W +LI Y GP +++ ++ M GI P T +++ AC++
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
G Q+H + + +DL +GN L+DMY KCG L VFD M R+V+S TS+
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
+ YAK ++++A +F + +++V+W A++ GY QN EAL +F ++ V
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +++ACA L + + G G S++ VG++LIDMY KCGSVED
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGF----GPTSNVVVGSALIDMYAKCGSVEDA 328
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
++FE M ER+ S+++MIVG A +G A+ LF +ML KP+ VT IGVL ACSHA
Sbjct: 329 YKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHA 388
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G+VE+G++ F+ M + HG+AP +DHY CMVDLLGRAG L+EA L++ MPM P +WG+
Sbjct: 389 GMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGA 448
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC++H N + + A L E+EP+ G Y+LLSN+YA GRW +V +VRKLMR +G+
Sbjct: 449 LLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGL 508
Query: 626 VKQPGCSWIE-ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
K PGCSW+E G ++ F D HP ++EI L+ L +K +GY PN S
Sbjct: 509 KKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLS 561
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 178/312 (57%), Gaps = 7/312 (2%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQNRLIDVYAK 66
+Q +G ++F F LL +C + V+ R+VH + I+ F S++++ N LID+Y K
Sbjct: 132 RQGIGPVSF----TFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVK 187
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CGCL +VFD+M +++V +W S+I K G ++ AS LF +P +D +W +MV+G+
Sbjct: 188 CGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGY 247
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SS 184
AQ+ R EAL F +M + E + +SACA K V + +S + +S
Sbjct: 248 AQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTS 307
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+V +GSALIDMY KCG V A +VF+ M ERN+ S++S+I + +G A A+E+F M+
Sbjct: 308 NVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEML 367
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
+ I+P+ VT V++AC+ ++G Q+ A + C + +VD+ + G+L
Sbjct: 368 KTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRL 427
Query: 305 NEARCVFDRMPI 316
EA + MP+
Sbjct: 428 EEALNLVKMMPM 439
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 56/383 (14%)
Query: 55 FIQNRLIDVYAKCGCLYGARKV----FDKMSNKNVFTWNSIITGLLKWGF-IDDASRL-F 108
+++RL+ V C + ++V F K + F ++ L K +D RL F
Sbjct: 37 ILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVF 96
Query: 109 ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFK 168
+ + W +++ G+A F E++ + M + ++F + L AC+ ++D
Sbjct: 97 QQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVN 156
Query: 169 MGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI--- 224
+G QVH + + SD+Y+G+ LIDMY KCG + C RVFD M +R+++SW SLI
Sbjct: 157 LGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAY 216
Query: 225 ----------------------------TCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
T Y QN +ALEVF RM A+G++ DEVTL
Sbjct: 217 AKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLV 276
Query: 257 SVVSACASLAAFKEGLQIHARLMR--CEK----LRNDLVLGNALVDMYAKCGKLNEARCV 310
V+SACA L A K +A +R E+ +++V+G+AL+DMYAKCG + +A V
Sbjct: 277 GVISACAQLGAAK-----YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKV 331
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGEN 366
F+RM RNV S +SM+ G+A +A +F +ML+ N V++ ++ + G
Sbjct: 332 FERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMV 391
Query: 367 EEALGLFRLLKR-ESVCPT--HY 386
E+ LF +++ V P+ HY
Sbjct: 392 EQGQQLFAMMEECHGVAPSEDHY 414
>gi|302776320|ref|XP_002971335.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
gi|300161317|gb|EFJ27933.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
Length = 614
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 346/610 (56%), Gaps = 35/610 (5%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S A +L C ++ ++ ++ I + F + ++ N L+ Y KCG + AR+VFD+
Sbjct: 13 SSHASILRDCASTRDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDR 72
Query: 80 MSNKNVFTWNSII------------TGLL--KWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ +N+F+W ++ GL+ K G +++A +FA++ ER++ SWN+M++
Sbjct: 73 IQRRNIFSWTIMLGAYADNGHGREALGLMYGKCGHLEEAKAVFATLVERNRVSWNAMLAA 132
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+ EA+ + M E +F S L G + + G ++H + +S + S+
Sbjct: 133 YAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKG--EGEHGRRIHDQVVESGFGSN 190
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+ +AL+ MYG GRV AR VFDG+ E+ +VSWN+++T Y QNG +A+++F +M
Sbjct: 191 TTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGEAVDLFWKM-- 248
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ PD V+ +V+ AC + +EG +H + + +++ +LV+MY + +L
Sbjct: 249 -DVAPDTVSFVNVLGACMDI---EEGRLVHEHI-KASGFPVGVLVSTSLVNMYGRFLRLE 303
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
EA+ F++ R+ V SMV YA+ ++ A+ +F ++ +++V W AL+ Y++N +
Sbjct: 304 EAKQCFEQARERDRVCWNSMVGAYAQNGCMEEAKAVFDRVASKDIVLWTALLTAYSRNED 363
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+ AL ++R + E + +TF ++++ CA+ L G++ H H V G + D
Sbjct: 364 AKGALLVYRNMDLEGMEKNRFTFSSIVSVCADAEALAEGQKVHLHTVS------VGYDKD 417
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM-- 483
+ VG +L+D Y KC V+ +F+ + +D V+WN MI G +NG+G EA+ L++KM
Sbjct: 418 VIVGTTLVDFYSKCHDVDTARSVFDGIEGKDIVTWNVMITGFVRNGHGREAVRLYQKMDL 477
Query: 484 ----LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
L G PD +T + VL ACSH G +++G F S ++G+A HY C+VD+LG
Sbjct: 478 PPDSLTMGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILG 537
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
R G L+EA+ ++ MP Q + V W +LL AC++HR+ G A ++E++P N+ PY L
Sbjct: 538 RVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYAL 597
Query: 600 LSNMYAELGR 609
LS M++ GR
Sbjct: 598 LSTMFSAAGR 607
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 55/238 (23%)
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+R++ + ++L CA+ DL +QA + + G D ++GN L+ Y
Sbjct: 4 ERDATAIAISSHASILRDCASTRDLTAAKQAQWEIARDGF------GGDRYLGNLLVQAY 57
Query: 437 MKCGSVEDGCRIFE---------------------------------------------T 451
KCGSV D +F+ T
Sbjct: 58 GKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLMYGKCGHLEEAKAVFAT 117
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+VER+ VSWNAM+ AQNG+ EA+ L++ M G KPD T + VL G E G
Sbjct: 118 LVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHG 175
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
R+ + E G +V + G G +D+A+ + + + + V W ++L A
Sbjct: 176 RRIHDQVV-ESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIA-EKTVVSWNAMLTA 231
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/617 (35%), Positives = 343/617 (55%), Gaps = 73/617 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+++ +L +C + + ++H+ I K+ F + + + LI++Y+K G + + +V
Sbjct: 347 INNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERV 406
Query: 77 FDKM-SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F +M S KN+ W M+S FAQ A
Sbjct: 407 FREMESTKNL-------------------------------AMWAVMISAFAQSGSTGRA 435
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F +M E ++ S LS +G +H + K +D+ +GS+L M
Sbjct: 436 VELFQRMLQEGLRPDKFCSSSVLSIID---SLSLGRLIHCYILKIGLFTDISVGSSLFTM 492
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + + VF+ M +++ VSW S+IT + ++ A A+++F M+ I PD++TL
Sbjct: 493 YSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTL 552
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+ ++AC++L + ++G ++H +R ++ ++++G ALV+MY+KCG + AR VFD +P
Sbjct: 553 TAALTACSALHSLEKGKEVHGYALRA-RVGKEVLVGGALVNMYSKCGAIVLARRVFDMLP 611
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++ S +S+VSGYA QNG E+AL LF
Sbjct: 612 QKDQFSCSSLVSGYA-------------------------------QNGYIEDALLLFHE 640
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ + +T +++ A A L L +G Q H V K GL +++ VG+SL+ M
Sbjct: 641 IRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLN------AEVSVGSSLVTM 694
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+++ ++FE + + D +SW AMIV AQ+G G EAL ++ M G KPD VT
Sbjct: 695 YSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTF 754
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSH G+VEEG + +SM+KE+G+ P HY CMVDLLGR+G L EA+ I MP
Sbjct: 755 VGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMP 814
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PDA++WG LLAACKVH +I LG AK+++E+EP +G YV LSN+ A++G W +V++
Sbjct: 815 IEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMK 874
Query: 616 VRKLMRKRGVVKQPGCS 632
+R LM GV K+PG S
Sbjct: 875 IRSLMEGTGVKKEPGWS 891
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 174/698 (24%), Positives = 305/698 (43%), Gaps = 129/698 (18%)
Query: 10 IVGDLAFLDSSPFAK------LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
+V L D +P L+ C ++ S D+ R ++ S F F ++
Sbjct: 97 MVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSA 156
Query: 64 YAKCGC-LYGARKVFDKMSNKNVFTWNSIITGLLKWGFID---------DASRLFASMPE 113
G LYG ++ ++ KN F N G ++ G ID DA R+F +
Sbjct: 157 CTALGSPLYG--ELVYSLALKNGFFSN----GYVRAGMIDLFAKLCSFEDALRVFQDVLC 210
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
+ WN+++SG ++ AL F +M F + ++F S L+ACA + + G V
Sbjct: 211 ENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGV 270
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
+ K DV++G+A+ID+Y KC + A + F M RN+VSW ++I+ + Q +
Sbjct: 271 QGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDS 330
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
A F M G + + T+ SV++AC KE +Q+H+ + + D + +A
Sbjct: 331 ISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFK-TGFYLDSNVSSA 389
Query: 294 LVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
L++MY+K G ++ + VF M +N+ M+S +A++ S A +F +ML+
Sbjct: 390 LINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQ----- 444
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
E + P + ++L+ + L LGR H +++
Sbjct: 445 --------------------------EGLRPDKFCSSSVLSI---IDSLSLGRLIHCYIL 475
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K GL +DI VG+SL MY KCGS+E+ +FE M ++D VSW +MI G +++ +
Sbjct: 476 KIGLF------TDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF-----SSMSKE------ 521
+A+ LF++MLL +PD +T+ L ACS +E+G++ + + KE
Sbjct: 530 AEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGA 589
Query: 522 -----------------HGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQP---D 559
+ P KD ++C +V + G +++A L + M D
Sbjct: 590 LVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWID 649
Query: 560 AVIWGSLLAACKVHRNIMLGEYV--------------------------------AKKLL 587
+ S++ A + ++ +G + K
Sbjct: 650 SFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFE 709
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
+IE + + + YA+ G+ E ++V LMRK G
Sbjct: 710 QIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGT 747
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 239/511 (46%), Gaps = 46/511 (9%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N F NS++ K + A RLF P + SWN ++SG Q+ F ++ F KM
Sbjct: 80 NTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMR 139
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
F +++++GS LSAC G V++L K+ + S+ Y+ + +ID++ K
Sbjct: 140 FSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFE 199
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A RVF + N+V WN++I+ +N AL++F +M P+ T +S+++ACA
Sbjct: 200 DALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACA 259
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+L + G + +++C D+ +G A++D+YAKC +++A F RMPIRNVVS T
Sbjct: 260 ALEELEFGRGVQGWVIKCGA-GEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWT 318
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+++S G+ Q ++ A F+ +++
Sbjct: 319 TIIS-------------------------------GFVQKDDSISAFHFFKEMRKVGEKI 347
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+YT ++L AC ++ Q H+ + K G D V ++LI+MY K G V+
Sbjct: 348 NNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYL------DSNVSSALINMYSKIGVVD 401
Query: 444 DGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
R+F M ++ W MI AQ+G A+ LF++ML G +PD VL
Sbjct: 402 LSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSII 461
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
L GR + K GL + + + + G L+E+ T+ E MP D V
Sbjct: 462 DSLSL---GRLIHCYILKI-GLFTDISVGSSLFTMYSKCGSLEESYTVFEQMP-DKDNVS 516
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLL--EIEP 591
W S++ H + + +++L EI P
Sbjct: 517 WASMITGFSEHDHAEQAVQLFREMLLEEIRP 547
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 192/398 (48%), Gaps = 40/398 (10%)
Query: 173 VHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+HA L + S+ +M ++L+ Y K + A R+FD N++SWN LI+ QN
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
D+ F +M SG +P++ T SV+SAC +L G ++ L+ L+N
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTAL-----GSPLYGELVYSLALKNGF--- 178
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+ Y + G M+ +AK S + A +F +L NVV
Sbjct: 179 --FSNGYVRAG----------------------MIDLFAKLCSFEDALRVFQDVLCENVV 214
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
WNA+I+G +N EN AL LF + P +TF ++L ACA L +L+ GR V
Sbjct: 215 CWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWV 274
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+K G +GE D+FVG ++ID+Y KC ++ + F M R+ VSW +I G Q
Sbjct: 275 IKCG----AGE--DVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKD 328
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
A FK+M GEK ++ T+ VL AC+ +++E + S + K G +
Sbjct: 329 DSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKT-GFYLDSNVS 387
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ ++++ + G +D ++ + M + +W +++A
Sbjct: 388 SALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISA 425
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 119/269 (44%), Gaps = 42/269 (15%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
++DS + ++ + S+ ++HA + K +E+ + + L+ +Y+KCG + K
Sbjct: 647 WIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHK 706
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF+++ ++ SW +M+ +AQH + +EA
Sbjct: 707 VFEQIEKPDLI-------------------------------SWTAMIVSYAQHGKGAEA 735
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG-TQVHALLSKSRYSSDVYMGSALID 194
L + M E +F LSAC+ + + G + ++++ + Y + ++D
Sbjct: 736 LKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVD 795
Query: 195 MYGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE- 252
+ G+ GR+ A R + M E + + W L+ + +G R++ +EP E
Sbjct: 796 LLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIE--LEPCEA 853
Query: 253 ---VTLASVVSACASLAAFKEGLQIHARL 278
VTL+++ CA + +++ ++I + +
Sbjct: 854 GAYVTLSNI---CADMGWWEDVMKIRSLM 879
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 304/533 (57%), Gaps = 16/533 (3%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S ++ + L C G +VHA S + V + + ++DMY KC + A+R+F
Sbjct: 88 SAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLF 147
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D M ER++ SWN +I+ Y + G +A ++F +M E D + ++ S +
Sbjct: 148 DEMAERDLCSWNIMISGYAKAGRLQEARKLFDQM----TERDNFSWTAMTSGYVRHDQHE 203
Query: 270 EGLQIHARLMRCEKLR-NDLVLGNALVDMYA----KCGKLNEARCVFDRMPIRNVVSETS 324
E L++ + R E + N + +AL A GK + + + VV ++
Sbjct: 204 EALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVW-SA 262
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
+ Y K S+ AR +F K ++R+VVSW A+I Y + G EE LF L + + P
Sbjct: 263 LSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPN 322
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+TF +LNACA+ A +LG+Q H ++ + G + F ++L+ MY KCG++++
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIGF------DPSSFAASTLVHMYTKCGNIKN 376
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
R+F M D VSW ++I G AQNG EAL F+ +L G +PDH+T +GVL AC+H
Sbjct: 377 ARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTH 436
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
AGLV++G +YF S+ ++HGL DHY C++DLL R+G L EA+ +I+ MP++PD +W
Sbjct: 437 AGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWA 496
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
SLL C++H N+ L + A+ L EIEP N Y L+N+YA G WG V VRK+M RG
Sbjct: 497 SLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARG 556
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
VVK+PG SWIEI V+VF+V D H +KEI+ L L++ MK GYVP+ +
Sbjct: 557 VVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTN 609
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/470 (32%), Positives = 245/470 (52%), Gaps = 41/470 (8%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R QI+ + ++ ++ LL CL+ +++ + +VHA S F + I NR++D+Y
Sbjct: 75 REAIQILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMY 134
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KC L A+++FD+M+ +++ +WN +I+G K G + +A +LF M ERD SW +M S
Sbjct: 135 IKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTS 194
Query: 125 GFAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
G+ +HD+ EAL F M ENF ++++ SAL+A A +G ++H + +
Sbjct: 195 GYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLD 254
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
D + SAL DMYGKCG + AR +FD +R++VSW ++I Y + G + +F +
Sbjct: 255 LDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDL 314
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+ SGI P+E T + V++ACA AA + G Q+H + R + LV MY KCG
Sbjct: 315 LKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRI-GFDPSSFAASTLVHMYTKCGN 373
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ AR VF+ MP ++VS TS++SGYA QN
Sbjct: 374 IKNARRVFNGMPRPDLVSWTSLISGYA-------------------------------QN 402
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGE 422
G+ +EAL F LL + P H TF +L+AC + + G + + KHGL +
Sbjct: 403 GQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADH 462
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ LID+ + G +++ I + M +E D W +++ GC +G
Sbjct: 463 YA------CLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHG 506
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 334/635 (52%), Gaps = 69/635 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HA K F+ LID Y+ CG + AR VFD + K
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGK----------------- 212
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
D +W +MVS ++++D AL F KM F + + SAL A
Sbjct: 213 --------------DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKA 258
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
+G +H K+ Y ++ ++G AL+DMY KCG + A +F+ + +++ W
Sbjct: 259 AVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILW 318
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
+ LI+ Y Q+ A E+F+RMM S + P+E +L+ V+ ACA++A + G QIH ++
Sbjct: 319 SFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIK 378
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
++L +GNAL+DMYAKC RN+ E S+
Sbjct: 379 L-GYESELFVGNALMDMYAKC---------------RNM--ENSLE-------------- 406
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
+F+ + + N VSWN +I GY Q+G E+AL +F ++ + T TF ++L ACAN +
Sbjct: 407 IFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSS 466
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
++ Q H+ + K S +D V NSLID Y KCG + D ++FE++VE D VSW
Sbjct: 467 IKHAVQIHSLIEK------STFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSW 520
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N++I A +G T AL LF +M K + VT + +L C GLV +G F+SM
Sbjct: 521 NSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMM 580
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE 580
+H + P +HYTC+V LLGRAG L +A I +P P ++W +LL++C VH+N+ LG
Sbjct: 581 DHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGR 640
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
Y A+K+L+IEP + YVLLSNMYA G EV RK MR GV K+ G SW+EI G V
Sbjct: 641 YAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEV 700
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ F V HP + I +L+ L + R GYVP+
Sbjct: 701 HAFSVGSADHPDMRIINAMLEWLNLKASREGYVPD 735
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 270/564 (47%), Gaps = 77/564 (13%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEI--FIQNRLIDVYAKCGCLY 71
L LDS A+ L C+ R VHAR+++ +++ F N L++ YAK G L
Sbjct: 40 LPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLA 99
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
AR RLF MPER++ S+ +++ G+A
Sbjct: 100 TAR-------------------------------RLFDGMPERNRVSFVTLMQGYALRGE 128
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
F EAL F ++ E ++ + + L + +HA K + + ++G+A
Sbjct: 129 FEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTA 188
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LID Y CG V AR VFDG+ ++ V+W ++++CY +N AL F +M +G +P+
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
L S + A L++ G IH ++ + +G AL+DMYAKCG + +A +F
Sbjct: 249 PFVLTSALKAAVCLSSALLGKGIHGCSVK-TLYDTEPHVGGALLDMYAKCGDIEDAHAIF 307
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ +P +V+ + ++S YA Q+ +NE+A
Sbjct: 308 EMIPHDDVILWSFLISRYA-------------------------------QSCQNEQAFE 336
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
+F + R V P ++ +L ACAN+A L+LG Q H +K G ES++FVGN+
Sbjct: 337 MFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGY------ESELFVGNA 390
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
L+DMY KC ++E+ IF ++ + + VSWN +IVG Q+G+ +AL +F +M
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLST 450
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKT 549
VT VL AC++ ++ + S + K D C ++D + G + +A
Sbjct: 451 QVTFSSVLRACANTSSIKHAVQIHSLIEKS---TFNNDTIVCNSLIDTYAKCGFIRDALK 507
Query: 550 LIEAMPMQPDAVIWGSLLAACKVH 573
+ E++ ++ D V W S+++A +H
Sbjct: 508 VFESI-VECDVVSWNSIISAYALH 530
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 150/291 (51%), Gaps = 31/291 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + ++H IK + SE+F+ N L+D+YAKC + + ++F + + N
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+WN+II G + GF +D AL F +M +
Sbjct: 416 EVSWNTIIVGYCQSGFAED-------------------------------ALSVFHEMRA 444
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ ++ +F S L ACA + K Q+H+L+ KS +++D + ++LID Y KCG +
Sbjct: 445 AHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRD 504
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A +VF+ + E ++VSWNS+I+ Y +G A++ALE+F RM S I+ ++VT S++S C S
Sbjct: 505 ALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGS 564
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+GL + +M +++ + +V + + G+L +A +P
Sbjct: 565 TGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIP 615
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L +C + S+ ++H+ I KS F ++ + N LID YAKCG + A KVF+ +
Sbjct: 454 FSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIV 513
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNSII S +A H R + AL F +
Sbjct: 514 ECDVVSWNSII-------------------------------SAYALHGRATNALELFDR 542
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCG 200
M+ + ++ +F S LS C + G + ++++ R + + ++ + G+ G
Sbjct: 543 MNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAG 602
Query: 201 RVSCARR-VFDGMRERNIVSWNSLIT 225
R++ A + + D + + W +L++
Sbjct: 603 RLTDALKFIGDIPSTPSPMVWRALLS 628
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/641 (33%), Positives = 330/641 (51%), Gaps = 70/641 (10%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
S+ D VH + K F S+ + N L+ YAK SN+
Sbjct: 211 SIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAK--------------SNRT--------- 247
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
DA +F MP RD SWNSM+SG + + +A+ FV+M E L +
Sbjct: 248 --------KDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSAT 299
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
S L ACA +G VH K+ + S + + L+DMY C ++F M
Sbjct: 300 LLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMV 359
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
++N+VSW ++IT Y + G +F M G PD + S + A A K G
Sbjct: 360 QKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKS 419
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H +R + L + NAL++MY KCG + EA+
Sbjct: 420 VHGYAIR-NGMEKVLAVTNALMEMYVKCGNMEEAK------------------------- 453
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
L+F ++ ++++SWN LI GY++N EA LF + + + P T +L
Sbjct: 454 ------LIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILP 506
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A A+L+ L+ GR+ H + ++ G +L D FV N+LIDMY+KCG++ R+F+ +
Sbjct: 507 AAASLSSLERGREMHAYALRRG--YLE----DDFVANALIDMYVKCGALLLARRLFDRLS 560
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
++ +SW M+ G +G G +A+ LF++M + G PD + +L ACSH+GL +EG +
Sbjct: 561 NKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWR 620
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+F +M KEH + P HYTCMVDLL G L EA I++MP++PD+ IW SLL C++H
Sbjct: 621 FFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIH 680
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
RN+ L E VA+++ E+EP N+G YVLL+N+YAE RW V +++ + RG+ + GCSW
Sbjct: 681 RNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSW 740
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
IE G V+VF+ ++ HP I L + + M+ G+ P
Sbjct: 741 IEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDP 781
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 82/458 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS+ +L +C + R VH +K+ F S+ + N L+D+Y+ C K+
Sbjct: 295 LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKI 354
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F M KNV +W ++IT + G D +
Sbjct: 355 FRNMVQKNVVSWTAMITSYTRAGLYDKVA------------------------------- 383
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
G F +M E ++ SAL A AG+ K G VH ++ + + +AL++MY
Sbjct: 384 GLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMY 443
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A+ +FDG+ ++++SWN+LI Y +N A++A +F M+ + P+ VT+
Sbjct: 444 VKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMT 502
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ A ASL++ + G ++HA +R L +D V NAL+DMY KCG L AR +FDR+
Sbjct: 503 CILPAAASLSSLERGREMHAYALRRGYLEDDFV-ANALIDMYVKCGALLLARRLFDRLSN 561
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+N++S T MV AGY +G +A+ LF +
Sbjct: 562 KNLISWTIMV-------------------------------AGYGMHGRGRDAIALFEQM 590
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL---- 432
+ + P +F +L AC +H+ + G RF + + L
Sbjct: 591 RVSGIAPDAASFSAILYAC-----------SHSGLRDEGWRFFDAMRKEHKIEPRLKHYT 639
Query: 433 --IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+D+ + G++++ ++M +E D W +++ GC
Sbjct: 640 CMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGC 677
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 215/454 (47%), Gaps = 53/454 (11%)
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSALIDMYGKCGRVSC 204
+ + S+G+ L C+ + G + H L+ S R D +G L+ MY KCG +
Sbjct: 88 GVDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLEN 147
Query: 205 ARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
ARRVFD M + ++ W +L++ Y + G + + +F +M G+ PD T++ V+ A
Sbjct: 148 ARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIA 207
Query: 264 SLAAFKEGLQIHARLMRCEKL--RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
L + ++G +H L EKL + +GNAL+ YAK + +A VFD MP R+V+S
Sbjct: 208 GLGSIEDGEVVHGLL---EKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVIS 264
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM+S G T NG ++A+ LF + E
Sbjct: 265 WNSMIS-------------------------------GCTSNGLYDKAIELFVRMWLEGE 293
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T ++L ACA L L LGR H + VK G F+ S + N L+DMY C
Sbjct: 294 ELDSATLLSVLPACAELHLLFLGRVVHGYSVKTG--FI----SQTSLANVLLDMYSNCSD 347
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+IF MV+++ VSW AMI + G + GLF++M L G +PD + L A
Sbjct: 348 WRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHA 407
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
+ L++ G K + +G+ + ++++ + G ++EAK + + + + D +
Sbjct: 408 FAGNELLKHG-KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV-VSKDMI 465
Query: 562 IWGSLLAACKVHRNIMLGEYVA---KKLLEIEPS 592
W +L+ RN + E + + LL++ P+
Sbjct: 466 SWNTLIGG--YSRNNLANEAFSLFTEMLLQLRPN 497
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
N I ++G+ EEALGL L + V ++G +L C+ + L+ G++AH V
Sbjct: 65 NLHIQRLCRSGDLEEALGL---LGSDGV--DDRSYGAVLQLCSEVRSLEGGKRAHFLVRA 119
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGY 472
L + D +G L+ MY+KCG +E+ R+F+ M + D W A++ G A+ G
Sbjct: 120 SSL---GRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGD 176
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
E + LF+KM CG +PD T+ VL + G +E+G + + ++ G
Sbjct: 177 LREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDG-EVVHGLLEKLGFGSQCAVGN 235
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
++ ++ +A + + MP + D + W S+++ C
Sbjct: 236 ALMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMISGC 272
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/673 (32%), Positives = 353/673 (52%), Gaps = 51/673 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F +L+ C + + +++HARI+ S + F+ ++LI Y+K LY A KV
Sbjct: 32 LDYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKV 91
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK+ +KN+F SWN+M+ G++ H+ L
Sbjct: 92 FDKILDKNIF-------------------------------SWNAMLIGYSIHNMHVHTL 120
Query: 137 GYFVKM--------HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+ +NF ++ ALS D + +V + + + SD+++
Sbjct: 121 NLLSSLLPSYSLTLKPDNFTIT--CVLKALSVLFP--DSILAKEVQCFVLRHGFDSDIFV 176
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASG 247
+ALI Y +C AR +FD M +R+IVSWNS+I Y Q G D E++ +M+ ++G
Sbjct: 177 VNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTG 236
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+ VT+ SV+ ACA G+++H ++ K+ D+ N+L+ +YAKCG L+ A
Sbjct: 237 LRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIE-RKVEMDVSAHNSLIGLYAKCGSLDYA 295
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
R +F+ M ++ V+ S+VSGY V A +F +M + +WNA+I+G QN NE
Sbjct: 296 RELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNE 355
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
L L + ++ P T ++L + ++L+ G+ H + +++G +I+
Sbjct: 356 GILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGY------AHNIY 409
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V S+ID Y K G + +F+ +R + W A+I + +G AL LF ML G
Sbjct: 410 VATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNG 469
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+PD VT VL AC+H+G+V E K F M ++G P +HY CMV +L RAG L EA
Sbjct: 470 TQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEA 529
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
I MP++P+A +WG+LL V ++ LG++V L +EP N+G YV+++N+Y++
Sbjct: 530 AEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYSQA 589
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GRW E +R+ M+K G+ K PG SWIE G + F+ +D ++EIY +L+ L M
Sbjct: 590 GRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLEGLLGLM 649
Query: 668 KRVGYVPNASDDE 680
+ GY DE
Sbjct: 650 REEGYTLQDELDE 662
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/593 (35%), Positives = 329/593 (55%), Gaps = 44/593 (7%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+R C S++S A S+A+ + + L S L C + K G
Sbjct: 8 KRPICVARSLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 173 VHALLSKSRYS-SDVYMGSALIDMYGKCGRV--SC------------------------- 204
+H L + + + + + LI MY KCG+ +C
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSG 127
Query: 205 ----ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
AR VFD M ER++VSWN+++ Y Q+G +AL F + SGI+ +E + A +++
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLT 187
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC + Q H +++ L N +VL +++D YAKCG++ A+ FD M ++++
Sbjct: 188 ACVKSRQLQLNQQAHGQVLVAGFLSN-VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
T+++SGYAK +++A +F +M E+N VSW ALIAGY + G + AL LFR +
Sbjct: 247 IWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMR 306
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P +TF + L A A++A L+ G+Q H ++++ +R + V +SLIDMY K G
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVR------PNAIVTSSLIDMYSKSG 360
Query: 441 SVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
S+E R+F ++ D V WN MI AQ+G G +AL + M+ P+ T++ +L
Sbjct: 361 SLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVIL 420
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLVEEG ++F SM+ +HG+ P ++HY C++DLLGRAGC E + IE MP +PD
Sbjct: 421 NACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPD 480
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
IW ++L C++H N LG+ A++L++++P +S PY+LLS++YA+ G+W V ++R +
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGI 540
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKD----KRHPLNKEIYLVLKMLTREMK 668
M+KR V K+ SWIEI V F V D H +EIY +L L M+
Sbjct: 541 MKKRRVNKEKAVSWIEIENKVKAFTVSDGSHAHAHARKEEIYFILHNLAALME 593
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 250/518 (48%), Gaps = 80/518 (15%)
Query: 2 ATQRSVKQIVGDLAFLDSS----PF---AKLLDSCLRSKSVSDTRRVHARIIKSQFA-SE 53
AT+ + Q V L L PF A LL C +KS+ + +H + + F
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
+ N LI +Y KCG A KVFD+M +N+++WN++++G +K G + A +F SMPE
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPE 141
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
RD SWN+MV G+AQ EAL +F ++ +E+SF L+AC S ++ Q
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQA 201
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-------------------- 213
H + + + S+V + ++ID Y KCG++ A+R FD M
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 214 -----------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
E+N VSW +LI Y + G AL++F +M+A ++P++ T +S + A
Sbjct: 262 EAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCAS 321
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
AS+A+ + G QIH ++R +R + ++ ++L+DMY+K G L + VF
Sbjct: 322 ASIASLRHGKQIHGYMIRT-NVRPNAIVTSSLIDMYSKSGSLEASERVF----------- 369
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
R+ + K ++ V WN +I+ Q+G +AL + + + V
Sbjct: 370 ----------------RICYDK---QDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVH 410
Query: 383 PTHYTFGNLLNACANLADLQLG-RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +LNAC++ ++ G R + V+HG+ + +E LID+ + G
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGI--VPDQEH----YACLIDLLGRAGC 464
Query: 442 VED-GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
++ +I E E D WNA++ C +G E LG
Sbjct: 465 FKELMSKIEEMPFEPDKHIWNAILGVC--RIHGNEELG 500
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 229/492 (46%), Gaps = 61/492 (12%)
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
R+R I SL++ + S A+ + GI LAS++ C + K+G
Sbjct: 7 RKRPICVARSLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
IH L R + +L N L+ MY KCGK +A VFD+M +RN+ S +MVSG+ K+
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKS 126
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+ AR++F M ER+VVSWN ++ GY Q+G EAL F+ L+R + ++F LL
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLL 186
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC LQL +QAH V+ ++G S++ + S+ID Y KCG +E R F+ M
Sbjct: 187 TACVKSRQLQLNQQAHGQVL------VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 453 VERD---W----------------------------VSWNAMIVGCAQNGYGTEALGLFK 481
+D W VSW A+I G + G G AL LF+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFR 300
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KM+ KP+ T LCA + + G++ M + + + P + ++D+ ++
Sbjct: 301 KMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTN-VRPNAIVTSSLIDMYSKS 359
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL-----LEIEPSNSGP 596
G L+ ++ + + D V+W ++++A H LG + L + P+ +
Sbjct: 360 GSLEASERVFRICYDKQDCVLWNTMISALAQHG---LGHKALQMLDDMIKFRVHPNRTTL 416
Query: 597 YVLL-----SNMYAELGRWGEVVRVRKLMRKRGVV--KQPGCSWIEILGHVNVF---MVK 646
V+L S + E RW E + V + G+V ++ I++LG F M K
Sbjct: 417 VVILNACSHSGLVEEGVRWFESMTV-----QHGIVPDQEHYACLIDLLGRAGCFKELMSK 471
Query: 647 DKRHPLNKEIYL 658
+ P + ++
Sbjct: 472 IEEMPFEPDKHI 483
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/533 (38%), Positives = 310/533 (58%), Gaps = 39/533 (7%)
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
H + +++ +AL C + G +H + K D++ + L++MY K +
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A ++FD M ERN +S+ +LI Y ++ +A+E+FVR+ + P++ T ASV+ AC
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQAC 148
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A++ G QIH +++ L +D+ + NAL+D+YAKCG++ + +F P
Sbjct: 149 ATMEGLNLGNQIHCHVIKI-GLHSDVFVSNALMDVYAKCGRMENSMELFAESP------- 200
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
RN V+WN +I G+ Q G+ E+AL LF + V
Sbjct: 201 ------------------------HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQ 236
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T T+ + L ACA+LA L+ G Q H+ VK + DI V N+LIDMY KCGS+
Sbjct: 237 ATEVTYSSALRACASLAALEPGLQIHSLTVKTTF------DKDIVVTNALIDMYAKCGSI 290
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+D +F+ M ++D VSWNAMI G + +G G EAL +F KM KPD +T +GVL AC
Sbjct: 291 KDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSAC 350
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++AGL+++G+ YF+SM ++HG+ P +HYTCMV LLGR G LD+A LI+ +P QP ++
Sbjct: 351 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W +LL AC +H +I LG A+++LE+EP + +VLLSNMYA RW V VRK M++
Sbjct: 411 WRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKR 470
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+GV K+PG SWIE G V+ F V D HP + I +L+ L + K+ GY+PN
Sbjct: 471 KGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPN 523
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 205/401 (51%), Gaps = 65/401 (16%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+S +A L C++ S + +H I+K + GCL
Sbjct: 36 FNSHAYANALQDCIQKDEPSRGKGLHCEILK------------------RGGCL------ 71
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
++F WN ++ +K F+ DAS+LF MPER+ S+ +++ G+A+ RF EA+
Sbjct: 72 -------DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV++H E ++++F S L ACA +G Q+H + K SDV++ +AL+D+Y
Sbjct: 125 ELFVRLHREVLP-NQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 183
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCGR+ + +F RN V+WN++I + Q G AL +F+ M+ ++ EVT +
Sbjct: 184 AKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYS 243
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S + ACASLAA + GLQIH+ ++ D+V+ NAL+DMYAKCG + +AR VFD M
Sbjct: 244 SALRACASLAALEPGLQIHSLTVKT-TFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK 302
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ VS +M+SGY + +G EAL +F +
Sbjct: 303 QDEVSWNAMISGY-------------------------------SMHGLGREALRIFDKM 331
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGL 416
+ V P TF +L+ACAN L G+ T +++ HG+
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGI 372
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 166/327 (50%), Gaps = 32/327 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L +C + ++ ++H +IK S++F+ N L+DVYAKCG +M
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG----------RME 190
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N + LFA P R+ +WN+++ G Q +AL F+
Sbjct: 191 N---------------------SMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLN 229
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E ++ SAL ACA + G Q+H+L K+ + D+ + +ALIDMY KCG
Sbjct: 230 MLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGS 289
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VFD M +++ VSWN++I+ Y +G +AL +F +M + ++PD++T V+SA
Sbjct: 290 IKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSA 349
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVV 320
CA+ +G +++ + + +V + + G L++A + D +P + +V+
Sbjct: 350 CANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVM 409
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLE 347
+++ + ++ R+ ++LE
Sbjct: 410 VWRALLGACVIHNDIELGRISAQRVLE 436
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 242/735 (32%), Positives = 355/735 (48%), Gaps = 111/735 (15%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P ++DS ++ + H + IK +++I+ N ++ Y +C
Sbjct: 3 PLNSVIDS--SKHALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSS----------- 49
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
G + A LF M RD +WN+M+SG+ A +
Sbjct: 50 ------------------GGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYK 91
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S Y+FGS L A + +G QVH+L+ K Y VY GSAL+DMY KC
Sbjct: 92 SMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCE 151
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
RV A VF + RN VSWN+LI + G A + M G+ D+ T + +++
Sbjct: 152 RVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLT 211
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD-RMPIRNV 319
+K +Q+H ++++ ++ D + NA + Y++CG L +A VFD + R++
Sbjct: 212 LLDEKKFYKLTMQLHCKIIK-HGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDL 270
Query: 320 VSETSMVSGYAKASSVKSARLMFTKM---------------------------------- 345
V+ SM++ + ++A +F M
Sbjct: 271 VTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIK 330
Query: 346 --LERNVVSWNALIAGYTQNGEN---------------------------------EEAL 370
LE+ V NA+IA Y ++ N E AL
Sbjct: 331 RGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENAL 390
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ V HY F +L +C++LA LQLG+Q H VK SG ES+ FV +
Sbjct: 391 KLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVK------SGFESNDFVAS 444
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY KCG +ED + FE + ++WN+++ AQ+G G ALGLF +M K
Sbjct: 445 SLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKM 504
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
DH+T + L ACSH GLVE+GR SM+ ++G++P +HY C VDL GRAG LDEAK L
Sbjct: 505 DHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKAL 564
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE+MP PDA++W +LL AC+ +I L VA LLE+EP YV+LSNMY L RW
Sbjct: 565 IESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRW 624
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E + +LMR+R V K PG SWIE+ V+ F+ D+ H +EIY +L+ L ++K +
Sbjct: 625 DEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIKWL 684
Query: 671 GYVPNAS---DDEAY 682
V + DD Y
Sbjct: 685 DSVAGSDSLLDDVDY 699
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 215/490 (43%), Gaps = 88/490 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F+ LL K T ++H +IIK + + N I Y++CG L A +V
Sbjct: 201 LDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERV 260
Query: 77 FD-KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FD + ++++ TWN SM++ F HDR A
Sbjct: 261 FDGAVGSRDLVTWN-------------------------------SMLAAFLAHDRKETA 289
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F+ M F Y++ + +SAC+ + G +H L+ K V + +A+I M
Sbjct: 290 FKLFLDMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAM 346
Query: 196 YGKCGRVSC--ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y + S A VF M ++ VSWNS++T + Q G + +AL++FV M + ++ D
Sbjct: 347 YLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHY 406
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
++V+ +C+ LA + G QIH ++ ND V ++L+ MY+KCG + +AR F++
Sbjct: 407 AFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFV-ASSLIFMYSKCGMIEDARKSFEK 465
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
AK SS ++WN+++ Y Q+G+ + ALGLF
Sbjct: 466 T---------------AKDSS----------------ITWNSIMFAYAQHGQGDVALGLF 494
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL- 432
++ + V H TF L AC +H +V+ G L SD + +
Sbjct: 495 FQMRDKKVKMDHITFVAALTAC-----------SHIGLVEQGRYLLKSMASDYGISPRME 543
Query: 433 -----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+D++ + G +++ + E+M + D + W ++ C G E LL
Sbjct: 544 HYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACG-DIELAAQVASHLLE 602
Query: 487 GEKPDHVTMI 496
E +H T +
Sbjct: 603 LEPEEHCTYV 612
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L SC ++ +++H +KS F S F+ + LI +Y+KCG + ARK
Sbjct: 403 IDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKS 462
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+K + + TWNSI +FA +AQH + AL
Sbjct: 463 FEKTAKDSSITWNSI---------------MFA----------------YAQHGQGDVAL 491
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ-VHALLSKSRYSSDVYMGSALIDM 195
G F +M + + +F +AL+AC+ + G + ++ S S + + +D+
Sbjct: 492 GLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDL 551
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+G+ G + A+ + + M + + + W +L+ G A +V ++ +EP+E
Sbjct: 552 FGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLE--LEPEEHC 609
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLR 285
++S + ARLMR K++
Sbjct: 610 TYVILSNMYGHLKRWDEKACMARLMRERKVK 640
>gi|334185448|ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g18840
gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana]
gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/679 (33%), Positives = 363/679 (53%), Gaps = 48/679 (7%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
K + D H R IKS N+L+++Y+K G L AR VFD+M +NV++WN++I
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 93 TGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQHDRF-SEALGYFVKMH---SENF 147
+K+ + +A LF S ERD ++N+++SGFA+ D SEA+ F +MH ++
Sbjct: 62 AAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDI 121
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ +++ + + A + G Q+H +L K+ + S+LI MY KCG+
Sbjct: 122 WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 208 VFDGM------------------RERNI----------------VSWNSLITCYEQNGPA 233
+F+G RE +I +SWN+LI Y QNG
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+AL++ V M +G++ DE + +V++ +SL + K G ++HAR+++ N V +
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFV-SSG 300
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
+VD+Y KCG + A N+ S +SM+ GY+ + A+ +F + E+N+V W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 354 NALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
A+ GY + + L L R + E+ P ++L AC+ A ++ G++ H H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ G+ D + + +DMY KCG+VE RIF++ ERD V +NAMI GCA +G+
Sbjct: 421 RTGILM------DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGH 474
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
++ F+ M G KPD +T + +L AC H GLV EG KYF SM + + ++P HYT
Sbjct: 475 EAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYT 534
Query: 533 CMVDLLGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CM+DL G+A LD+A L+E + ++ DAVI G+ L AC ++N L + V +KLL IE
Sbjct: 535 CMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEG 594
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
SN Y+ ++N YA GRW E+ R+R MR + + GCSW I ++F D H
Sbjct: 595 SNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHY 654
Query: 652 LNKEIYLVLKMLTREMKRV 670
+ IY +L +T+++ +
Sbjct: 655 ETEAIYAMLHFVTKDLSEI 673
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L+ KS+ + VHAR++K+ S F+ + ++DVY KCG + A
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA---QHDRFSE 134
N+++ +S+I G G + +A RLF S+ E++ W +M G+ Q D E
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
F+ +E S L AC+ + G ++H ++ D + +A +D
Sbjct: 379 LARAFIA--NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG V A R+FD ER+ V +N++I +G + + + F M G +PDE+T
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+++SAC EG + ++ + + ++D+Y K +L++A
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 304/527 (57%), Gaps = 39/527 (7%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
+ Y + S L +C + + G Q+HA L + + ++ + + L++ Y C + A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
D + + N+ WN LI Y NGP A+ ++ +M+ G++PD TL V+ AC++L+
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
EG IH R++R R D+ +G ALVDMYAKCG CV D
Sbjct: 177 EGRVIHERVIRSGWER-DVFVGAALVDMYAKCG------CVVD----------------- 212
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
AR +F K+++R+ V WN+++A Y QNG +E+L L + + V PT T
Sbjct: 213 --------ARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLV 264
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++++ A++A L GR+ H +HG ++ + V +LIDMY KCGSV+ C +F
Sbjct: 265 TVISSSADIACLPHGREIHGFGWRHGFQY------NDKVKTALIDMYAKCGSVKVACVLF 318
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
E + E+ VSWNA+I G A +G EAL LF++M+ +PDH+T +G L ACS L++
Sbjct: 319 ERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLLD 377
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EGR ++ M ++ + P +HYTCMVDLLG G LDEA LI M + PD+ +WG+LL +
Sbjct: 378 EGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNS 437
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
CK H N+ L E +KL+E+EP +SG YV+L+NMYA+ G+W V R+R+LM +G+ K
Sbjct: 438 CKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNI 497
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
CSWIE+ V F+ D HP + IY LK L M+ GYVP+
Sbjct: 498 ACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDT 544
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 223/478 (46%), Gaps = 80/478 (16%)
Query: 19 SSP-----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
SSP +A LL+SC+ +K++ +++HAR+ + A + + +L++ Y+ C L A
Sbjct: 53 SSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNA 112
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+FDK+ N+F WN ++ +A +
Sbjct: 113 HHLFDKIPKGNLFL-------------------------------WNVLIRAYAWNGPHE 141
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A+ + +M ++ L AC+ G +H + +S + DV++G+AL+
Sbjct: 142 TAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALV 201
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCG V AR VFD + +R+ V WNS++ Y QNG ++L + M A G+ P E
Sbjct: 202 DMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEA 261
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL +V+S+ A +A G +IH R ND V AL+DMYAKCG + A +F+R
Sbjct: 262 TLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKV-KTALIDMYAKCGSVKVACVLFER 320
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER---NVVSWNALIAGYTQNGENEEAL 370
+ + VVS ++++GYA A +F +M++ + +++ +A ++ +E
Sbjct: 321 LREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGR 380
Query: 371 GLFRLLKRE-SVCPT--HYT------------------------------FGNLLNACAN 397
L+ L+ R+ + PT HYT +G LLN+C
Sbjct: 381 ALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKT 440
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+++L A +++ L ++S +V L +MY + G E R+ + M+++
Sbjct: 441 HGNVELAEVALEKLIE-----LEPDDSGNYV--ILANMYAQSGKWEGVARLRQLMIDK 491
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 330/591 (55%), Gaps = 12/591 (2%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V N++++ LK G +A LF +M RD SWN++++G+A + + ++L F +
Sbjct: 280 DVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLV 339
Query: 144 S-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGR 201
S E L + S L ACA + + G QVHA + + + D G+AL+ Y KCG
Sbjct: 340 SLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGY 399
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A F + ++++SWNS++ + + S L + M+ I PD VT+ +++
Sbjct: 400 IEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHF 459
Query: 262 CASLAAFKEGLQIHARLMRCEKL--RNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRN 318
CASL K+ +IH +R L +GNA++D Y+KCG + A +F + RN
Sbjct: 460 CASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRN 519
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V+ S++SGY S A ++F+ M E ++ +WN ++ Y +N E+AL LF L+
Sbjct: 520 LVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQT 579
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ + P T +L+ C +A + L RQ H ++++ D+ + +L+D Y K
Sbjct: 580 QGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-------DLHLKGTLLDAYAK 632
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG + +IF++ V++D V + AMI G A +G +AL F ML G KPDHV +
Sbjct: 633 CGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSI 692
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSHAG + EG K F S+ K HG+ P + + C+VDLL R G + EA + + +P++
Sbjct: 693 LSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEA 752
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A IWG+LL ACK + + LG VA KL +IE ++ G Y++LSN+YA RW V+ VRK
Sbjct: 753 NANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRK 812
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
+MR + + K GCSWIE+ N+F+V D HP IY L L +++K
Sbjct: 813 MMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVKE 863
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 232/493 (47%), Gaps = 74/493 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L SC + + + +H+ ++K S L+++YAKCG L
Sbjct: 36 DHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGML------- 88
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF-SEAL 136
DD +LF D WN ++SG+++ + ++ +
Sbjct: 89 ------------------------DDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVM 124
Query: 137 GYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F MHS + S + + L CA S + G VH + KS + D + G+AL+ M
Sbjct: 125 KVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSM 184
Query: 196 YGKCGRVSC-ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y KCG V+C A VFD + +++VSWN++I +NG +A +F MM ++P+ T
Sbjct: 185 YAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYAT 244
Query: 255 LASVVSACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+A+++ CAS A + G QIH+ +++ +L D+ + NAL+ Y K G+ EA +F
Sbjct: 245 VANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLF 304
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
M R++VS WN +IAGY NGE ++L
Sbjct: 305 WAMDARDLVS-------------------------------WNTIIAGYALNGEWLKSLH 333
Query: 372 LF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+F L+ E + T ++L ACA L +LQ G+Q H ++++H F D GN
Sbjct: 334 VFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLF-----EDTSAGN 388
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y KCG +E+ F + +D +SWN+++ + + + L L ML +P
Sbjct: 389 ALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRP 448
Query: 491 DHVTMIGVLCACS 503
D VT++ ++ C+
Sbjct: 449 DSVTILTIIHFCA 461
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 162/621 (26%), Positives = 263/621 (42%), Gaps = 133/621 (21%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
S A +L C RS +++ + VH +IKS F + F N L+ +YAKCG +
Sbjct: 140 SVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVAC------ 193
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
DA +F S+ +D SWN+M++G A++ EA
Sbjct: 194 ------------------------DAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSL 229
Query: 139 FVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHA-LLSKSRYSSDVYMGSALID 194
F M + + + + L CA ++ + G Q+H+ +L S+DV + +AL+
Sbjct: 230 FSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLS 289
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEV 253
Y K GR A +F M R++VSWN++I Y NG +L VF +++ + D V
Sbjct: 290 FYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSV 349
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T+ S++ ACA L + G Q+HA ++R L D GNALV YAKCG + EA F
Sbjct: 350 TMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTF-- 407
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
SM+S ++++SWN+++ + + + L L
Sbjct: 408 ----------SMIS-------------------RKDLISWNSILDAFGEKRHHSRFLSLL 438
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
++ + + P T +++ CA+L ++ ++ H + ++ G + + VGN+++
Sbjct: 439 HVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPT---VGNAIL 495
Query: 434 DMYMKCGSVE--------------------------------DGCRIFETMVERDWVSWN 461
D Y KCG++E D IF M E D +WN
Sbjct: 496 DAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWN 555
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE-----EGRKYFS 516
M+ A+N +AL LF K+ G KPD VT++ ++ C+ V G S
Sbjct: 556 LMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRS 615
Query: 517 SMSKEHGLAPLKDHY------------------------TCMVDLLGRAGCLDEAKTLIE 552
S H L D Y T M+ G ++A
Sbjct: 616 SFEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFS 675
Query: 553 A---MPMQPDAVIWGSLLAAC 570
M ++PD VI+ S+L+AC
Sbjct: 676 HMLNMGIKPDHVIFTSILSAC 696
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 230/492 (46%), Gaps = 59/492 (11%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVK--MHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
+W S + R +EAL +F S F + L +C+ + +G +H+
Sbjct: 2 TWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHS 61
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA-S 234
+ K + S AL++MY KCG + ++FD + V WN +++ Y ++G +
Sbjct: 62 YVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDA 121
Query: 235 DALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
D ++VF M +SG + P VT+A+V+ CA G +H +++ D GNA
Sbjct: 122 DVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIK-SGFEMDTFAGNA 180
Query: 294 LVDMYAKCGKLN-EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
LV MYAKCG + +A VFD ++ ++VVS
Sbjct: 181 LVSMYAKCGLVACDAYAVFD-------------------------------SIIHKDVVS 209
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA----NLADLQLGRQAH 408
WNA+IAG +NG +EA LF L+ + SV P + T N+L CA N+A + GRQ H
Sbjct: 210 WNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAH-RCGRQIH 268
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
++V++ +D+ V N+L+ Y+K G ++ +F M RD VSWN +I G A
Sbjct: 269 SYVLQ-----WPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYA 323
Query: 469 QNGYGTEALGLFK-----KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
NG ++L +F +MLL D VTM+ +L AC+ ++ G++ + + +
Sbjct: 324 LNGEWLKSLHVFGNLVSLEMLLL----DSVTMVSILPACAQLDNLQAGKQVHAYILRHPF 379
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIMLGEY 581
L +V + G ++EA +M + D + W S+L A K H + L
Sbjct: 380 LFEDTSAGNALVSFYAKCGYIEEAYHTF-SMISRKDLISWNSILDAFGEKRHHSRFLSLL 438
Query: 582 VAKKLLEIEPSN 593
L+I P +
Sbjct: 439 HVMLKLDIRPDS 450
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 155/304 (50%), Gaps = 5/304 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGAR 74
DS ++ C V + +H I+S A+ + N ++D Y+KCG + A
Sbjct: 449 DSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYAN 508
Query: 75 KVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
K+F +S K N+ T NS+I+G + G DA+ +F+ M E D +WN MV +A++D
Sbjct: 509 KMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPE 568
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+AL F+K+ ++ + S + C + Q H + +S + D+++ L+
Sbjct: 569 QALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLL 627
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCG + A ++F ++++V + ++I Y +G + ALE F M+ GI+PD V
Sbjct: 628 DAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHV 687
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
S++SAC+ EGL+I + + ++ + +VD+ A+ G ++EA +
Sbjct: 688 IFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTK 747
Query: 314 MPIR 317
+PI
Sbjct: 748 IPIE 751
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 187/417 (44%), Gaps = 51/417 (12%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLY 71
++ LDS +L +C + ++ ++VHA I++ F E N L+ YAKCG +
Sbjct: 342 EMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIE 401
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP-------ERDQCSWNSMV- 123
A F +S K++ +WNSI+ +G SR + + D + +++
Sbjct: 402 EAYHTFSMISRKDLISWNSILDA---FGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIH 458
Query: 124 --SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR 181
+ + + E GY ++ S A + + L A + + + ++ LS+ R
Sbjct: 459 FCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKR 518
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
++ ++LI Y G A +F GM E ++ +WN ++ Y +N ALE+F+
Sbjct: 519 ---NLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFL 575
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
++ G++PD VT+ S++ C +A+ Q H ++R DL L L+D YAKC
Sbjct: 576 KLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSS--FEDLHLKGTLLDAYAKC 633
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G + A +F SSV +MFT A+I GY
Sbjct: 634 GIIGYAYKIFQ--------------------SSVDKDLVMFT-----------AMIGGYA 662
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLR 417
+G +E+AL F + + P H F ++L+AC++ + G + + K HG++
Sbjct: 663 MHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMK 719
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 352/675 (52%), Gaps = 75/675 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D++ L+ C S S +H+ ++S S + + N L+++Y+ G L
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL------- 297
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA LF +M RD SWN+M+S + Q+ ++AL
Sbjct: 298 ------------------------SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 333
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ N + + +F SAL AC+ G VHA++ + ++ +G++LI MYG
Sbjct: 334 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 393
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A +VF M +IVS+N LI Y + A++VF M ++GI+P+ +T+ +
Sbjct: 394 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN 453
Query: 258 VVSACASLAAFKE-GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + AS G +HA ++R L ++ V N+L+ MYAKCG L
Sbjct: 454 IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYV-ANSLITMYAKCGNL------------ 500
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+S+ +F + +N+VSWNA+IA Q G EEAL LF +
Sbjct: 501 -------------------ESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 541
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ L++CA+LA L+ G Q H GL SG +SD +V N+ +DMY
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLH------GLGMKSGLDSDSYVVNAAMDMY 595
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +++ ++ R WN +I G A+ GY EA FK+M+ G KPD+VT +
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 655
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSHAGLV++G Y++SM+ G++P H C+VDLLGR G EA+ IE MP+
Sbjct: 656 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 715
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
P+ +IW SLL++ + H+N+ +G AKKLLE++P + YVLLSN+YA RW +V ++
Sbjct: 716 LPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKL 775
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+ + K+P CSW+++ V+ F + D+ H ++IY L + +++ VGY+ +
Sbjct: 776 RSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADT 835
Query: 677 SD-----DEAYEEQN 686
S DE +EQN
Sbjct: 836 SSALHDTDEEQKEQN 850
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 251/520 (48%), Gaps = 48/520 (9%)
Query: 58 NRLIDVYAKCGCLYG-------ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
N V + CG L A +V V NS+IT G + DA +LF
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 205
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
M E D SWN+M+S ++ S+ F M + S +S CA S F G
Sbjct: 206 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 265
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+ +H+L +S S V + +AL++MY G++S A +F M R+++SWN++I+ Y QN
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 325
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
++DAL+ ++ + P+ +T +S + AC+S A +G +HA +++ RN L++
Sbjct: 326 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN-LLV 384
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GN+L+ MY KC + +A VF MP ++VS
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVS----------------------------- 415
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ-LGRQAHT 409
+N LI GY + +A+ +F ++ + P + T N+ + A+ DL GR H
Sbjct: 416 --YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHA 473
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++++ G FLS E +V NSLI MY KCG++E IF ++ ++ VSWNA+I Q
Sbjct: 474 YIIRTG--FLSDE----YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQ 527
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
G+G EAL LF M G K D V + L +C+ +EEG + + + GL
Sbjct: 528 LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSY 586
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D+ G+ G +DE ++ ++P W +L++
Sbjct: 587 VVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQC-WNTLISG 625
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 243/500 (48%), Gaps = 50/500 (10%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV+ +++ G + DA RLF MPER+ SW +++ + + EAL + +M
Sbjct: 78 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 137
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + +F + +S C + G QV + + S + V + ++LI M+G GRV
Sbjct: 138 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 197
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++FD M E + +SWN++I+ Y G S VF M G+ PD TL S++S CA
Sbjct: 198 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S F G IH+ +R L + + + NALV+MY+ GKL++A +F M R+++S
Sbjct: 258 SSDHFSHGSGIHSLCLR-SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLIS-- 314
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
WN +I+ Y QN + +AL L + P
Sbjct: 315 -----------------------------WNTMISSYVQNCNSTDALKTLGQLFHTNESP 345
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
H TF + L AC++ L G+ H V++ L + ++ VGNSLI MY KC S+E
Sbjct: 346 NHLTFSSALGACSSPGALIDGKMVHAIVLQLSL------QRNLLVGNSLITMYGKCNSME 399
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA-C 502
D ++F++M D VS+N +I G A GT+A+ +F M G KP+++TMI + +
Sbjct: 400 DAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFA 459
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDA 560
S L GR + + + L D Y ++ + + G L+ + + ++ +
Sbjct: 460 SSNDLHNYGRPLHAYIIRT---GFLSDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNI 515
Query: 561 VIWGSLLAACKVHRNIMLGE 580
V W +++AA N+ LG
Sbjct: 516 VSWNAIIAA-----NVQLGH 530
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 41/365 (11%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+ +G L + SP F+ L +C ++ D + VHA +++ + + N LI +Y
Sbjct: 333 KTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 392
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KC + A KVF M P D S+N ++
Sbjct: 393 GKCNSMEDAEKVFQSM-------------------------------PTHDIVSYNVLIG 421
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYS 183
G+A + ++A+ F M S + + + + A S D G +HA + ++ +
Sbjct: 422 GYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 481
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
SD Y+ ++LI MY KCG + + +F+ + +NIVSWN++I Q G +AL++F+ M
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 541
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+G + D V LA +S+CASLA+ +EG+Q+H M+ L +D + NA +DMY KCGK
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMK-SGLDSDSYVVNAAMDMYGKCGK 600
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVSWNALIAG 359
++E V IR +++SGYAK K A F +M+ + + V++ AL++
Sbjct: 601 MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSA 660
Query: 360 YTQNG 364
+ G
Sbjct: 661 CSHAG 665
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A+ L SC S+ + ++H +KS S+ ++ N +D+Y KCG + +V
Sbjct: 548 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 607
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRF 132
+ + WN++I+G K+G+ +A F M + D ++ +++S +
Sbjct: 608 VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 667
Query: 133 SEALGYFVKMHS 144
+ + Y+ M S
Sbjct: 668 DKGIDYYNSMAS 679
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 312/526 (59%), Gaps = 40/526 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + L+ C + G +VH + K+ Y VY+ + LI +Y KC + AR +FD M
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
++N+VSW ++I+ Y Q G A +AL +FV M+ S EP+ T A+++++C F+ G Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
IH+ ++ + + +G++L+DMYAK G++ +A VF +P
Sbjct: 213 IHSIAIK-RNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP------------------ 253
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
ER+VV+ A+I+GY Q G +EEAL LFR L+ E + T+ ++L
Sbjct: 254 -------------ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLT 300
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + LA L G+Q H+HV++ SG+ S + + NSLIDMY KCG+V RIF++M
Sbjct: 301 ALSGLAALNHGKQVHSHVLR------SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMP 354
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGR 512
ER +SWNAM+VG +++G E L LFK M + KPD +T + VL CSH L + G
Sbjct: 355 ERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGL 414
Query: 513 KYFSSM-SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ F +M + + G+ P HY C+VDLLGRAG ++EA I+ MP P A IWGSLL +C+
Sbjct: 415 EIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCR 474
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
VH ++ +G V +KLLE+EP N+G YV+LSN+YA G+W ++ +R LM+++ V K+PG
Sbjct: 475 VHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGR 534
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SW+E+ V+ F D HP +E+ +K L+ + K GYVP+ S
Sbjct: 535 SWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKEDGYVPDLS 580
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 248/492 (50%), Gaps = 90/492 (18%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L+ C+ +++ + +RVH +IK+ + ++++ RLI +Y KC CL AR++FD+M
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEM- 151
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
P+++ SW +M+S ++Q EAL FV+
Sbjct: 152 ------------------------------PQKNVVSWTAMISAYSQRGFAFEALNLFVE 181
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + + ++F + L++C GS+ F+ G Q+H++ K Y S +++GS+L+DMY K GR
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 241
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF + ER++V+ ++I+ Y Q G +AL++F ++ G+ + VT ASV++A
Sbjct: 242 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LAA G Q+H+ ++R + + +VL N+L+DMY+KCG + AR +FD MP R +S
Sbjct: 302 LSGLAALNHGKQVHSHVLRSGQY-SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCIS 360
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVV-----SWNALIAGYTQ-------------- 362
+M+ GY+K + +F M E N V ++ A+++G +
Sbjct: 361 WNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNM 420
Query: 363 -NGEN--EEALG-----------------LFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
NG++ E +G F +K+ PT +G+LL +C +D++
Sbjct: 421 VNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 480
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI--DMYMKCGSVEDGCRIFETMVE------ 454
+G + G + L E + GN +I ++Y G ED I + M E
Sbjct: 481 IG-------IIVGQKLLELEPEN--AGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKE 531
Query: 455 --RDWVSWNAMI 464
R WV + ++
Sbjct: 532 PGRSWVELDQIV 543
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 146/343 (42%), Gaps = 61/343 (17%)
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+G+ +EAL +L RE + +LN C + ++ G++ HTH++K +
Sbjct: 71 SGQLKEALLQMAILGREV---KFEGYDTILNECVSQRAIREGQRVHTHMIK------TCY 121
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
+++ LI +Y KC + D +F+ M +++ VSW AMI +Q G+ EAL LF +
Sbjct: 122 LPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVE 181
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE--------------------- 521
ML +P+H T +L +C + E GR+ S K
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGR 241
Query: 522 ----HGL---APLKDHYTCMVDLLGRA--GCLDEAKTLIEAMP---MQPDAVIWGSLLAA 569
HG+ P +D C + G A G +EA L + M ++V + S+L A
Sbjct: 242 ICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTA 301
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN----MYAELGRWGEVVRVRKLMRKRGV 625
+ G+ V +L S YV+L N MY++ G R+ M +R
Sbjct: 302 LSGLAALNHGKQVHSHVLR---SGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTC 358
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+ SW N +V +H + +E+ + K++ E K
Sbjct: 359 I-----SW-------NAMLVGYSKHGMAREVLELFKLMREENK 389
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 125/309 (40%), Gaps = 72/309 (23%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S +A +L + +++ ++VH+ +++S S + + N LID+Y+KCG + AR++F
Sbjct: 291 NSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIF 350
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M + +WN+++ G K G + LF M E ++ +S+
Sbjct: 351 DSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI--------------- 395
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV--HALLSKSRYSSDVYMGSALIDM 195
++ + LS C+ MG ++ + + K D+ ++D+
Sbjct: 396 ---------------TYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDL 440
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
G+ GRV A FD +++ V P
Sbjct: 441 LGRAGRVEEA---FDFIKKMPFV-------------------------------PTAAIW 466
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLR--NDLVLGNALVDMYAKCGKLNEARCVFDR 313
S++ +C + + G+ + +L+ E N ++L N +YA GK + R + D
Sbjct: 467 GSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSN----LYASAGKWEDMRNIRDL 522
Query: 314 MPIRNVVSE 322
M + V E
Sbjct: 523 MQEKAVTKE 531
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 335/620 (54%), Gaps = 72/620 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKV 76
D+ F+ +L +C S++ + R+VH +I+K F + + F+ L+D+YAKCG + +R V
Sbjct: 102 DNVVFSHVLKACSESRNFDEGRKVHCQIVK--FGNPDSFVFTGLVDMYAKCGEIECSRSV 159
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ ++NVF SW+SM++G+ Q++ + L
Sbjct: 160 FDENLDRNVF-------------------------------SWSSMIAGYVQNNLAQDGL 188
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E ++ + G + AC G +H L K Y+ +AL+D+Y
Sbjct: 189 VLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLY 248
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG V AR VFD + +IVSW ++I Y QNG +AL++F++ + P++VT+A
Sbjct: 249 AKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIA 308
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV S+C+ L G IH ++ D ++ N+LVD YA +C +R
Sbjct: 309 SVFSSCSQLLNLNLGRSIHGLSIKLGS--RDPIVTNSLVDFYA--------KCQMNR--- 355
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
AR +F + +R+VV+WN++I+ ++QNG EAL LF +
Sbjct: 356 --------------------DARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQM 395
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ SV P T ++L+ACA+L LQ+G H + VK GL S+++VG +L+ Y
Sbjct: 396 RMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLL-----SSNVYVGTALLTFY 450
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG E IF+ M ++ V+W+AMI G G G +L +F ML KP+
Sbjct: 451 AKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFT 510
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH G++ EG + F+ + +++ L P HYTCMVDLL RAG L EA I+ MP+
Sbjct: 511 SILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPV 570
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QPD ++G+ L C +H LGE K++LE+ P ++ YVL+ N+YA RW +V +V
Sbjct: 571 QPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQV 630
Query: 617 RKLMRKRGVVKQPGCSWIEI 636
R+LM++RG++K PGCS +E+
Sbjct: 631 RELMKQRGLMKTPGCSLMEM 650
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/558 (29%), Positives = 265/558 (47%), Gaps = 76/558 (13%)
Query: 21 PFAKLLDSCLRS--KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
P +L + S +++ +HA ++ ++ +L+ +Y G L AR VFD
Sbjct: 2 PLPPILHNFFYSLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFD 61
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+ + + +W II +W F++ F + +G+
Sbjct: 62 TIPHPDFLSWKVII----RWYFLN---------------------------SEFRDIVGF 90
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M F L AC+ S +F G +VH + K + D ++ + L+DMY K
Sbjct: 91 YNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAK 149
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG + C+R VFD +RN+ SW+S+I Y QN A D L +F RM IE +++TL +
Sbjct: 150 CGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGIL 209
Query: 259 VSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V AC L A +G +H L++C +L + LV AL+D+YAKCG + +AR VFD +
Sbjct: 210 VHACKKLGALHQGKWLHGYLIKCGIELGSYLV--TALLDLYAKCGVVRDARSVFDELHGI 267
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++VS T+M I GYTQNG EEAL LF +
Sbjct: 268 DIVSWTAM-------------------------------IVGYTQNGCPEEALKLFLQKE 296
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ +V P T ++ ++C+ L +L LGR H +K G R D V NSL+D Y
Sbjct: 297 QVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSR-------DPIVTNSLVDFYA 349
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KC D +FET+ +RD V+WN++I +QNG EAL LF +M + PD VT++
Sbjct: 350 KCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVS 409
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+ ++ G + + K L+ T ++ + G + A+ + + M Q
Sbjct: 410 VLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMD-Q 468
Query: 558 PDAVIWGSLLAACKVHRN 575
V W ++++ + N
Sbjct: 469 KSTVTWSAMISGYGIQGN 486
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 355/661 (53%), Gaps = 74/661 (11%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ F++LL C+ +S+S + + A+++KS F E+ ++L+D KCG + AR+
Sbjct: 47 THTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQ--- 102
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
LF MPER +WNS+++ + +H R EA+
Sbjct: 103 ----------------------------LFDGMPERHIVTWNSIIAYYIKHRRSKEAVEM 134
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYG 197
+ M S N EY+ S A + K + H L + S+V++GSAL+DMY
Sbjct: 135 YRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 194
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G+ A+ V D + E+++V +LI Y Q G ++A++ F M+ ++P+E T AS
Sbjct: 195 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 254
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ +C +L G IH + K G F+
Sbjct: 255 VLISCGNLKDIGNGKLIHG--------------------LMVKSG--------FESA--- 283
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ S+TS+++ Y + S V + L+F + N V+W +LI+G QNG E AL FR +
Sbjct: 284 -LASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMM 342
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R+SV P +T + L C+NLA + GRQ H V K+G + D + G+ LI++Y
Sbjct: 343 RDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGF------DRDKYAGSGLIELYG 396
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + +F+T+ E D +S N MI AQNG+G EAL LF++M+ G +P+ VT++
Sbjct: 397 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLS 456
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+++GLVEEG + F S K+ + DHY CMVD+LGRAG L+EA+ LI +
Sbjct: 457 VLLACNNSGLVEEGCELFDSFRKDK-IMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-N 514
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD V+W +LL+ACKVHR + + E + +K+LEI P + G +LLSN+YA G+W V+ ++
Sbjct: 515 PDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMK 574
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDK-RHPLNKEIYLVLKMLTREMKRVGYVPNA 676
M++ + K P SW+EI + FM D HP +++I L+ L ++ K +GYV +
Sbjct: 575 SKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDK 634
Query: 677 S 677
S
Sbjct: 635 S 635
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/628 (34%), Positives = 333/628 (53%), Gaps = 86/628 (13%)
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFAL---------SEYSFGSALSACAGSVDFKMG 170
++V H RF EA+ + + AL S + + + +C S + G
Sbjct: 30 TTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQG 89
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+VH + S + +++ + L++MY KC + ++++FD M ER++ SWN LI+ Y +
Sbjct: 90 KKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKM 149
Query: 231 GPASDALEVFVRM----------MASGI----EPDEV------------------TLASV 258
G +A +F +M M SG P+E T++S
Sbjct: 150 GLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
++A A++ + G +IH +MR L +D V+ +AL DMY KCG
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRT-GLDSDEVVWSALSDMYGKCG---------------- 252
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
S++ AR +F KM++R++V+W A+I Y Q+G +E LF L R
Sbjct: 253 ---------------SIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLR 297
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P +TF +LNACAN +LG++ H ++ + G S F ++L+ MY K
Sbjct: 298 SGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS------FAASALVHMYSK 351
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG++ R+F+ + D SW ++I G AQNG EA+ F+ ++ G +PDH+T +GV
Sbjct: 352 CGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGV 411
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC+HAGLV++G YF S+ +++GL DHY C++DLL R+G DEA+ +I M M+P
Sbjct: 412 LSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKP 471
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D +W SLL C++H N+ L + A+ L EIEP N YV L+N+YA G W EV ++RK
Sbjct: 472 DKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRK 531
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS- 677
M RGVVK+PG SWI I V+VF+V D HP +KEI L L++ MK G+VP+ +
Sbjct: 532 TMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNF 591
Query: 678 -----DDEAYEEQNGSNSTSDCQIDFQV 700
+DE +EQN S + + F +
Sbjct: 592 VLHDVEDEQ-KEQNLSYHSEKLAVAFGI 618
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 249/471 (52%), Gaps = 51/471 (10%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
QI+ + +S ++ L+ SC++S+ + ++VH I S F +FI NRL+++YAKC
Sbjct: 60 QILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCD 119
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L ++K+FD+M +++ +WN +I+G K G + +A LF MPERD SW +M+SG+ +
Sbjct: 120 SLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVR 179
Query: 129 HDRFSEALGYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
HDR +EAL F M S+N ++++ SAL+A A ++G ++H + ++ SD
Sbjct: 180 HDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEV 239
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ SAL DMYGKCG + AR +FD M +R+IV+W ++I Y Q+G + ++F ++ SG
Sbjct: 240 VWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSG 299
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I P+E T + V++ACA+ + + G ++H + R +ALV MY+KCG + A
Sbjct: 300 IRPNEFTFSGVLNACANQTSEELGKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVSA 358
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF P ++ S TS+ IAGY QNG+ +
Sbjct: 359 ERVFKETPQPDLFSWTSL-------------------------------IAGYAQNGQPD 387
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ F LL + P H TF +L+AC AH +V GL + +
Sbjct: 388 EAIRYFELLVKSGTQPDHITFVGVLSAC-----------AHAGLVDKGLDYFHSIKEQYG 436
Query: 428 VGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ ++ +ID+ + G ++ I M ++ D W +++ GC +G
Sbjct: 437 LTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/650 (34%), Positives = 347/650 (53%), Gaps = 75/650 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + ++ S S+ + +++HA +IK +F S++++ N LI +Y K GC + A KVF
Sbjct: 125 DSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVF 184
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M +++ +WNS+I+G L ++ GF F E L
Sbjct: 185 EEMPERDIVSWNSMISGYL------------------------ALEDGFRSLMLFKEMLK 220
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMY 196
+ F +S SAL AC+ MG ++H +SR + DV + ++++DMY
Sbjct: 221 F-------GFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMY 273
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTL 255
K G VS A R+F + +RNIV+WN LI CY +N +DA F +M +G++PD +TL
Sbjct: 274 SKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITL 333
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++ ACA L EG IH MR L + +VL AL+DMY + G+L A +FDR+
Sbjct: 334 INLLPACAIL----EGRTIHGYAMRRGFLPH-IVLDTALIDMYGEWGQLKSAEVIFDRIA 388
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+N++S S++ A Y QNG+N AL LF+
Sbjct: 389 EKNLISWNSII-------------------------------AAYVQNGKNYSALELFQK 417
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L S+ P T ++L A A L GRQ H ++VK S S+ + NSL+ M
Sbjct: 418 LWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVK------SRYGSNTIILNSLVHM 471
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y CG +ED + F ++ +D VSWN++I+ A +G+G ++ LF +M+ P+ T
Sbjct: 472 YAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTF 531
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L ACS +G+V+EG +YF SM +E+G+ P +HY M+DL+GR G AK I MP
Sbjct: 532 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
P A IWGSLL A + H +I + E+ A+++ ++E N+G YVLL NMYAE RW +V R
Sbjct: 592 FLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNR 651
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
++ LM +G+ + S +E +V D+ H +IY VL +++R
Sbjct: 652 IKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSR 701
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 44/483 (9%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
+ G G ++DA +LF M + D WN M+ GF + EAL + +M
Sbjct: 67 LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADS 126
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+++ + + G + G ++HA++ K R+ SDVY+ ++LI +Y K G A +VF+
Sbjct: 127 FTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEE 186
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ER+IVSWNS+I+ Y +L +F M+ G +PD + S + AC+ + + G
Sbjct: 187 MPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMG 246
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
++H +R D+++ +++DMY+K G+++ A +F + RN+V+ ++ YA+
Sbjct: 247 KELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYAR 306
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
S V A L F KM E QNG + P T NL
Sbjct: 307 NSRVTDAFLCFQKMSE--------------QNG----------------LQPDVITLINL 336
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L ACA L GR H + ++ G FL I + +LIDMY + G ++ IF+
Sbjct: 337 LPACAILE----GRTIHGYAMRRG--FL----PHIVLDTALIDMYGEWGQLKSAEVIFDR 386
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ E++ +SWN++I QNG AL LF+K+ PD T+ +L A + + + EG
Sbjct: 387 IAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEG 446
Query: 512 RKYFSSMSK-EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
R+ + + K +G + +V + G L++A+ + ++ D V W S++ A
Sbjct: 447 RQIHAYIVKSRYGSNTII--LNSLVHMYAMCGDLEDARKCFNHVLLK-DVVSWNSIIMAY 503
Query: 571 KVH 573
VH
Sbjct: 504 AVH 506
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 129/254 (50%), Gaps = 23/254 (9%)
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
T + G+A + ++ A +F +M + + WN +I G+T G EAL L+ + V
Sbjct: 64 TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
+T+ ++ + ++ L+ G++ H V+K LRF+ SD++V NSLI +YMK G
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIK--LRFV----SDVYVCNSLISLYMKLGCS 177
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
D ++FE M ERD VSWN+MI G G +L LFK+ML G KPD + + L AC
Sbjct: 178 WDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGAC 237
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHY--------TCMVDLLGRAGCLDEAKTLIEAM 554
SH Y +M KE ++ T ++D+ + G + A+ + + +
Sbjct: 238 SHV--------YSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI 289
Query: 555 PMQPDAVIWGSLLA 568
+Q + V W L+
Sbjct: 290 -IQRNIVAWNVLIG 302
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 352/675 (52%), Gaps = 75/675 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D++ L+ C S S +H+ ++S S + + N L+++Y+ G L
Sbjct: 547 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL------- 599
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA LF +M RD SWN+M+S + Q+ ++AL
Sbjct: 600 ------------------------SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 635
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ N + + +F SAL AC+ G VHA++ + ++ +G++LI MYG
Sbjct: 636 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 695
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KC + A +VF M +IVS+N LI Y + A++VF M ++GI+P+ +T+ +
Sbjct: 696 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN 755
Query: 258 VVSACASLAAFKE-GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + AS G +HA ++R L ++ V N+L+ MYAKCG L
Sbjct: 756 IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYV-ANSLITMYAKCGNL------------ 802
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+S+ +F + +N+VSWNA+IA Q G EEAL LF +
Sbjct: 803 -------------------ESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 843
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ L++CA+LA L+ G Q H GL SG +SD +V N+ +DMY
Sbjct: 844 QHAGNKLDRVCLAECLSSCASLASLEEGMQLH------GLGMKSGLDSDSYVVNAAMDMY 897
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +++ ++ R WN +I G A+ GY EA FK+M+ G KPD+VT +
Sbjct: 898 GKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFV 957
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSHAGLV++G Y++SM+ G++P H C+VDLLGR G EA+ IE MP+
Sbjct: 958 ALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPV 1017
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
P+ +IW SLL++ + H+N+ +G AKKLLE++P + YVLLSN+YA RW +V ++
Sbjct: 1018 LPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKL 1077
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+ + K+P CSW+++ V+ F + D+ H ++IY L + +++ VGY+ +
Sbjct: 1078 RSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADT 1137
Query: 677 SD-----DEAYEEQN 686
S DE +EQN
Sbjct: 1138 SSALHDTDEEQKEQN 1152
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 251/520 (48%), Gaps = 48/520 (9%)
Query: 58 NRLIDVYAKCGCLYG-------ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
N V + CG L A +V V NS+IT G + DA +LF
Sbjct: 448 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 507
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
M E D SWN+M+S ++ S+ F M + S +S CA S F G
Sbjct: 508 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 567
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+ +H+L +S S V + +AL++MY G++S A +F M R+++SWN++I+ Y QN
Sbjct: 568 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 627
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
++DAL+ ++ + P+ +T +S + AC+S A +G +HA +++ RN L++
Sbjct: 628 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN-LLV 686
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
GN+L+ MY KC + +A VF MP ++VS
Sbjct: 687 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVS----------------------------- 717
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ-LGRQAHT 409
+N LI GY + +A+ +F ++ + P + T N+ + A+ DL GR H
Sbjct: 718 --YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHA 775
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
++++ G FLS E +V NSLI MY KCG++E IF ++ ++ VSWNA+I Q
Sbjct: 776 YIIRTG--FLSDE----YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQ 829
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD 529
G+G EAL LF M G K D V + L +C+ +EEG + + + GL
Sbjct: 830 LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDSDSY 888
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+D+ G+ G +DE ++ ++P W +L++
Sbjct: 889 VVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQC-WNTLISG 927
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 243/500 (48%), Gaps = 50/500 (10%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NV+ +++ G + DA RLF MPER+ SW +++ + + EAL + +M
Sbjct: 380 NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 439
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + +F + +S C + G QV + + S + V + ++LI M+G GRV
Sbjct: 440 RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++FD M E + +SWN++I+ Y G S VF M G+ PD TL S++S CA
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S F G IH+ +R L + + + NALV+MY+ GKL++A +F M R+++S
Sbjct: 560 SSDHFSHGSGIHSLCLR-SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLIS-- 616
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
WN +I+ Y QN + +AL L + P
Sbjct: 617 -----------------------------WNTMISSYVQNCNSTDALKTLGQLFHTNESP 647
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
H TF + L AC++ L G+ H V++ L + ++ VGNSLI MY KC S+E
Sbjct: 648 NHLTFSSALGACSSPGALIDGKMVHAIVLQLSL------QRNLLVGNSLITMYGKCNSME 701
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA-C 502
D ++F++M D VS+N +I G A GT+A+ +F M G KP+++TMI + +
Sbjct: 702 DAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFA 761
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPDA 560
S L GR + + + L D Y ++ + + G L+ + + ++ +
Sbjct: 762 SSNDLHNYGRPLHAYIIRT---GFLSDEYVANSLITMYAKCGNLESSTNIFNSI-TNKNI 817
Query: 561 VIWGSLLAACKVHRNIMLGE 580
V W +++AA N+ LG
Sbjct: 818 VSWNAIIAA-----NVQLGH 832
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 180/365 (49%), Gaps = 41/365 (11%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
+ +G L + SP F+ L +C ++ D + VHA +++ + + N LI +Y
Sbjct: 635 KTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMY 694
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KC + A KVF M ++ ++N +I G + ++D ++
Sbjct: 695 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGG---YAVLEDGTK------------------ 733
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYS 183
A+ F M S + + + + A S D G +HA + ++ +
Sbjct: 734 ----------AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 783
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
SD Y+ ++LI MY KCG + + +F+ + +NIVSWN++I Q G +AL++F+ M
Sbjct: 784 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 843
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+G + D V LA +S+CASLA+ +EG+Q+H M+ L +D + NA +DMY KCGK
Sbjct: 844 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMK-SGLDSDSYVVNAAMDMYGKCGK 902
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML----ERNVVSWNALIAG 359
++E V IR +++SGYAK K A F +M+ + + V++ AL++
Sbjct: 903 MDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSA 962
Query: 360 YTQNG 364
+ G
Sbjct: 963 CSHAG 967
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 166/372 (44%), Gaps = 55/372 (14%)
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
+FD M +R +W + ++ + G A E+ M G+ LAS+V+AC
Sbjct: 298 HLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRG 357
Query: 267 ---AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
G IHA R L ++ +G AL+ +Y G +++A+ +F MP RN
Sbjct: 358 RDEGIACGAAIHALTHRA-GLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERN----- 411
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
VVSW AL+ + NG EEAL +R ++R+ V
Sbjct: 412 --------------------------VVSWTALMVALSSNGYLEEALRAYRQMRRDGVPC 445
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
F +++ C +L + G Q + V+ +SG ++ + V NSLI M+ G V
Sbjct: 446 NANAFATVVSLCGSLENEVPGLQVASQVI------VSGLQNQVSVANSLITMFGNLGRVH 499
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
D ++F+ M E D +SWNAMI + G ++ +F M G +PD T+ ++ C+
Sbjct: 500 DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559
Query: 504 HAGLVEEGRKYFSSMSKEHGL---APLKDHYT---CMVDLLGRAGCLDEAKTLIEAMPMQ 557
+ +FS S H L + L T +V++ AG L +A+ L M +
Sbjct: 560 SS-------DHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR 612
Query: 558 PDAVIWGSLLAA 569
D + W +++++
Sbjct: 613 -DLISWNTMISS 623
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A+ L SC S+ + ++H +KS S+ ++ N +D+Y KCG + +V
Sbjct: 850 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 909
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM----PERDQCSWNSMVSGFAQHDRF 132
+ + WN++I+G K+G+ +A F M + D ++ +++S +
Sbjct: 910 VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 969
Query: 133 SEALGYFVKMHS 144
+ + Y+ M S
Sbjct: 970 DKGIDYYNSMAS 981
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC---A 162
LF M +R +W + VSG + R A M LS ++ S ++AC
Sbjct: 75 HLFDEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRG 134
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
G +HAL ++ +VY+G AL+ +
Sbjct: 135 RDEGIACGAAIHALTHRAGLMGNVYIGRALLHL 167
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 302/526 (57%), Gaps = 15/526 (2%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ L C K G QVHA + K+ S +Y+ + L+DMY KCG + A +VFD M R
Sbjct: 124 TLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHR 182
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++ SWN +I+ Y + G A +F +M D + +++S C +E L+++
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEALELY 238
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET----SMVSGYAK 331
+ + + +++ ++ + A L+ + + + + S+ S++ Y K
Sbjct: 239 RLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGK 298
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
S++ AR +F KM ER+VVSW +I Y +NG EE LFR L ++ P +TF +
Sbjct: 299 CGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGV 358
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
LNACA+LA LG+Q H ++V+ G S S +L+ MY KCG +E+ +FE
Sbjct: 359 LNACADLAAEDLGKQIHAYMVRVGFDSFSSAAS------ALVHMYSKCGDIENAKSVFEI 412
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ + D SW +++VG AQ+G +AL F+ +L G KPD + IGVL AC+HAGLV++G
Sbjct: 413 LPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKG 472
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+YF S+ ++HGL DHY C++DLL RAG EA+++I MP++PD IW +LL C+
Sbjct: 473 LEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCR 532
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H N+ L + AK L EIEP N YV L+N+YA G E +R+ M RG+VK+PG
Sbjct: 533 IHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGM 592
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
SWIEI V+VF V D HP +KEI L L++ MK VGYVP+ +
Sbjct: 593 SWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTN 638
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/456 (33%), Positives = 244/456 (53%), Gaps = 42/456 (9%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+S + LL CL+ +++ + ++VHA I K+ + ++I NRL+D+YAKCG L A KVFD
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFD 177
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
+M ++++ +WN +I+G +K G + A LF MP RD SW +++SG QH+R EAL
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALEL 237
Query: 139 FVKMHSENFALSEY-SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ M +++ S + SAL+A A MG ++H + + SD + +L+DMYG
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR +FD M ER++VSW ++I Y +NG + +F +M S I P++ T A
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++ACA LAA G QIHA ++R + +ALV MY+KCG + A+ VF+ +P
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRV-GFDSFSSAASALVHMYSKCGDIENAKSVFEILPQP 416
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++ S TS++ GYA Q+G++++AL F LL
Sbjct: 417 DLFSWTSLLVGYA-------------------------------QHGQHDKALHFFELLL 445
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ P F +L+ACA+ + G + H+ KHGL D + +ID+
Sbjct: 446 KSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLT----RTIDHYA--CIIDLL 499
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G + I M ++ D W A++ GC +G
Sbjct: 500 ARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHG 535
>gi|359477774|ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/658 (31%), Positives = 348/658 (52%), Gaps = 32/658 (4%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A L+ P + C+R+ + + + + + + N +I Y + G
Sbjct: 37 ALLNLKPLNSRISDCMRNGFTEEAQMLFDEMPQRNTVT----YNAMIRGYFQNGHFGEGV 92
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD+M +++F++N++I GL+K+G I+ AS +F MP RD SWNSM+SG+ + E
Sbjct: 93 SLFDEMPERDIFSYNTMIAGLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGE 152
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F M ++ S+ ++ G + + K + D+ + +I
Sbjct: 153 ALRVFSGMVLKDVV----SWNLVIAGLVGVGKVDLAEEFF----KEMGTRDIASWTTMIS 204
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
GR+ AR +F+ M R++ +WN++I Y +NG +F +M + D +
Sbjct: 205 GLASAGRIVEARGLFEDMPVRDVRAWNTMIAGYIENGCIEIGEVLFQKMP----QRDFRS 260
Query: 255 LASVVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+++ ++ +++ + +C + N +V G + G + EA ++
Sbjct: 261 WNEMINGLVRNQRIQDAMRLFVEMPQKCRRSWNSIVFG------LIRNGLIKEAHAFLEK 314
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
P + VS T+++ GY + V +A +F M R+ +WN +I G +N EE L F
Sbjct: 315 SPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDATAWNVIIWGLGENDHGEEGLKFF 374
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+K P TF ++L C++L L LGRQ H V K G + + V N+++
Sbjct: 375 VKMKEGGPFPDEATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYF------VAVSNAMV 428
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
+Y +CG+ +F M D++SWN++I G A NG G EA+ +F+KM KP+H+
Sbjct: 429 TLYARCGNSNSALLLFSAMRSHDFISWNSIICGLAHNGNGVEAIEVFEKMRSIDIKPNHI 488
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI-- 551
T +GVL ACSHAGLV++G+ YF M + L P +HYTC+VDLLGR G +DEA + +
Sbjct: 489 TFVGVLSACSHAGLVDQGKYYFDFMKYKCCLEPTIEHYTCIVDLLGRFGLIDEAMSFLRQ 548
Query: 552 -EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
EA ++ A +WG++L AC++H+N+ +GE +++LEIEP NSG Y++L+ MY G+
Sbjct: 549 MEANGVEVPASVWGAVLGACRIHKNMQVGEIAGERILEIEPHNSGVYIILAEMYLSSGKR 608
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+ RV MR++GV KQP CSW+E+ G +VF+ D HP + VL +L EM+
Sbjct: 609 EDAERVWVRMREKGVKKQPACSWMEVNGSGHVFLSGDSSHPQFSRVCGVLGLLHMEME 666
>gi|449517072|ref|XP_004165570.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 351/651 (53%), Gaps = 44/651 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S ++ L+ CL SV + + +H +++K S F+ NR + +YA G ++ KVFD
Sbjct: 17 SHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDG 76
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +KN+ +WN + G+ ++G +D A LF MPERD SWN+M+SG+ + A+G
Sbjct: 77 IKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFVNSAMGVS 136
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGK 198
++M + F SEY+F LS + G QVH + +S S + +G++LIDMYGK
Sbjct: 137 LEMQNAGFRPSEYTFSILLSLVPSAFH---GKQVHGSMIRSGVDVSSMVLGNSLIDMYGK 193
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G V +F M + +++SWNSLI ++G AL F M + PD+ T++ V
Sbjct: 194 VGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMV 253
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S C L + G QI A + N +VL +A +D+++KC
Sbjct: 254 ISICCCLQELELGKQIFAFCFKMGFTSNSIVL-SATIDLFSKC----------------- 295
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
S+K A +F + + V N +I+ + +G +++ LF R
Sbjct: 296 --------------DSLKVAVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLR 341
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E++ P T ++L++ + ++LG Q H V+K G +SD+ V +SL+DMY K
Sbjct: 342 ENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGF------QSDVIVTSSLVDMYAK 395
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
GS++D ++F M RD +SWN MI+G NG EAL F K+++ G PD +T+ GV
Sbjct: 396 VGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGV 455
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS+AGLVEEG FS M+ EHG+ P +HY+C+V+LL RAG +EA +I+ QP
Sbjct: 456 LLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQP 515
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+ W SLL C +H ++ + E VA+ ++++EP +S PY +L+ YA +W +VRV+K
Sbjct: 516 TSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKK 575
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKE-IYLVLKMLTREMK 668
K CSWI + F D+ L++E I VL+++ E++
Sbjct: 576 TWENIATQKVKACSWIVTKDYAYAFQ-DDQLQLLSRENIISVLELIIWEIE 625
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/667 (33%), Positives = 342/667 (51%), Gaps = 91/667 (13%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D A LD+ LL +C ++ S R +H K+ FAS++F+ N L+++Y KCGCL
Sbjct: 82 DAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVS 141
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR VFD+ MPERD SW +M+ + + F
Sbjct: 142 ARLVFDQ-------------------------------MPERDVVSWTTMLGCYVRSKAF 170
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS--RYSSDVYMGS 190
EAL +M LS + S ++ +D K G VH + ++ +V M +
Sbjct: 171 GEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTT 230
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
ALIDMY K G ++ A+R+FD + +R++VSW +I ++ + + F RM+ + P
Sbjct: 231 ALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFP 290
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+E+TL S+++ C + G HA L+R L L AL+DMY KCG++
Sbjct: 291 NEITLLSLITECGFVGTLDLGKWFHAYLLR-NGFGMSLALVTALIDMYGKCGQV------ 343
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
GYA+A +F + +++V W+ LI+ Y ++
Sbjct: 344 -----------------GYARA--------LFNGVKKKDVKIWSVLISAYAHVSCMDQVF 378
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF + V P + T +LL+ CA L LG+ H ++ +HGL E D+ +
Sbjct: 379 NLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGL------EVDVILET 432
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+LI+MY KCG V +F ++RD WN M+ G + +G G EAL LF +M G +P
Sbjct: 433 ALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEP 492
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ +T + + ACSH+GL+E HY C+VDLLGRAG LDEA +
Sbjct: 493 NDITFVSIFHACSHSGLME--------------------HYGCLVDLLGRAGHLDEAHNI 532
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MPM+P+ +IWG+LLAACK+H+N+ LGE A+K+LE++P N G VL SN+YA RW
Sbjct: 533 IENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW 592
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
+V VR+ M G+ K+PG SWIE+ G V+ F DK ++Y ++ + +++
Sbjct: 593 NDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRES 652
Query: 671 GYVPNAS 677
GY PN +
Sbjct: 653 GYTPNTA 659
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 349/667 (52%), Gaps = 78/667 (11%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
+++ SC R ++++ RR+H I + S++++ N L+ +Y KCG L AR VF+ K
Sbjct: 39 RVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAK 98
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
NVF+W +IT C AQH R EAL F +M
Sbjct: 99 NVFSWTILIT----------------------VC---------AQHGRSQEALALFYEML 127
Query: 144 SENFALSEYSFGSALSACAGSVDF-KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ SF +A++AC+ +F G +HALL + + V ++L+ MY KCG +
Sbjct: 128 KQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSL 187
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
+ + F+ M E N VSWN++I + ++ +AL +M GI VT +++SA
Sbjct: 188 EESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAY 247
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ K IH ++R D+V N +++MY KCG L +A +F M +V++
Sbjct: 248 DQPSQLKSARYIHDCILRT-GFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAW 304
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+M+ A Y+Q+G EAL + L++ E V
Sbjct: 305 NTMI-------------------------------AAYSQHGHTSEALRFYELMQEEGVV 333
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P YT+ ++++ACA L D+++G+Q H + G R E + NSL++MY KCG +
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRRL---GDRAFQVTE----LANSLVNMYGKCGIL 386
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ IF+ + V+WNAMI AQ+ + +A LF M L GE+P ++T + VL AC
Sbjct: 387 DVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSAC 445
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++AGL EE YF M ++HG+ P HY CMV+ LG+AG L +A+ LI+ MP +PD +
Sbjct: 446 ANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLT 505
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
W S LA C+ H ++ G++ AK + I+P S YV L+ ++A+ G + E R+RKLM
Sbjct: 506 WTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLD 565
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN----ASD 678
RG+ K G S I++ V F D+ +P +KEI+ LK L +EMKR GY P+ A D
Sbjct: 566 RGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHD 625
Query: 679 DEAYEEQ 685
EA +++
Sbjct: 626 VEAGQKE 632
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/662 (34%), Positives = 345/662 (52%), Gaps = 72/662 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + ++ C R V H +K E+ + + L+D+Y+KCG L AR +F
Sbjct: 298 DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D E++ SWNSM+ G+++ F A
Sbjct: 358 DT--------------------------------NEKNVISWNSMIGGYSKDRDFRGAFE 385
Query: 138 YFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDM 195
KM E+ ++E + + L C + F ++H L SD + +A +
Sbjct: 386 LLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAG 445
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG + A VF GM + + SWN+LI + QNG AL++++ M SG+EPD T+
Sbjct: 446 YAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTI 505
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AS++SACA L + G +IH + LRN +L+E C+
Sbjct: 506 ASLLSACARLKSLSCGKEIHGSM-----LRNGF--------------ELDEFICI----- 541
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
S+VS Y + + A+L F M E+N+V WN +I G++QN +AL +F
Sbjct: 542 --------SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + P + L AC+ ++ L+LG++ H VK L E S FV SLIDM
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT----EHS--FVTCSLIDM 647
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG +E IF+ + + V+WN +I G +G+G +A+ LFK M G +PD VT
Sbjct: 648 YAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTF 707
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
I +L AC+HAGLV EG +Y M G+ P +HY C+VD+LGRAG L+EA L+ +P
Sbjct: 708 IALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELP 767
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD+ IW SLL++C+ +R++ +GE VA KLLE+ P + YVL+SN YA LG+W EV +
Sbjct: 768 DKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRK 827
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R+ M++ G+ K GCSWIEI G V+ F+V D+ + +I L +++ ++GY P+
Sbjct: 828 MRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPD 887
Query: 676 AS 677
S
Sbjct: 888 TS 889
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 169/628 (26%), Positives = 292/628 (46%), Gaps = 123/628 (19%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL C K++ R++H I S F +++ + RL+ +Y+ C Y + VF+ K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N+F WN+ ++SG+ ++ F +A+ FV+M
Sbjct: 159 NLFLWNA-------------------------------LLSGYLRNSLFRDAVFVFVEMI 187
Query: 144 S-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
S F ++ + AC G D ++G VH K++ SDV++G+ALI MYGK G V
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFV 247
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA--SGIEPDEVTLASVVS 260
A +VFD M +RN+VSWNS++ +NG ++ +F ++ G+ PD T+ +V+
Sbjct: 248 ESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIP 307
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
CA + G+ H ++ L +L + ++L+DMY+KCG L EAR +FD +NV+
Sbjct: 308 LCARQGEVRLGMVFHGLALKL-GLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVI 365
Query: 321 SETSMVSGYAKASSVKSARLMFTKM----------------------------------- 345
S SM+ GY+K + A + KM
Sbjct: 366 SWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGY 425
Query: 346 ------LERNVVSWNALIAGYTQNGE-------------------------------NEE 368
++ + + NA +AGY + G +
Sbjct: 426 ALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRK 485
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
AL L+ L++ + P +T +LL+ACA L L G++ H ++++G E D F+
Sbjct: 486 ALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF------ELDEFI 539
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
SL+ +Y++CG + F+ M E++ V WN MI G +QN + +AL +F +ML
Sbjct: 540 CISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKI 599
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH--YTC-MVDLLGRAGCLD 545
PD +++IG L ACS + G++ K H L +H TC ++D+ + GC++
Sbjct: 600 WPDEISIIGALGACSQVSALRLGKELHCFAVKSH----LTEHSFVTCSLIDMYAKCGCME 655
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+++ + + + ++ + V W L+ +H
Sbjct: 656 QSQNIFDRVHLKGE-VTWNVLITGYGIH 682
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 186/376 (49%), Gaps = 51/376 (13%)
Query: 155 GSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
G L C + ++G ++H +S S + +DV + + L+ MY C + VF+ R
Sbjct: 97 GLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR 156
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGL 272
+N+ WN+L++ Y +N DA+ VFV M++ + PD TL V+ AC + + G
Sbjct: 157 RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+H ++ K+ +D+ +GNAL+ MY K G + A VFD+MP
Sbjct: 217 AVHGFALK-TKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP----------------- 258
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR--ESVCPTHYTFGN 390
+RN+VSWN+++ +NG EE+ GLF+ L E + P T
Sbjct: 259 --------------QRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVT 304
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
++ CA +++LG +V HGL G ++ V +SL+DMY KCG + + +F+
Sbjct: 305 VIPLCARQGEVRLG------MVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD 358
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVE 509
T E++ +SWN+MI G +++ A L +KM + + K + VT++ VL C
Sbjct: 359 TN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC------- 410
Query: 510 EGRKYFSSMSKEHGLA 525
E F + + HG A
Sbjct: 411 EEEIQFLKLKEIHGYA 426
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLL 376
+VV T +V+ Y+ S + L+F +N+ WNAL++GY +N +A+ +F ++
Sbjct: 128 DVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMI 187
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
P ++T ++ AC + D++LG H +K + SD+FVGN+LI MY
Sbjct: 188 SLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVL------SDVFVGNALIAMY 241
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--KPDHVT 494
K G VE ++F+ M +R+ VSWN+++ C +NG E+ GLFK +L E PD T
Sbjct: 242 GKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVAT 301
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
M+ V+ C+ G V G F ++ + GL + ++D+ + G L EA+ L +
Sbjct: 302 MVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT- 359
Query: 555 PMQPDAVIWGSLLAACKVHRNI 576
+ + + W S++ R+
Sbjct: 360 -NEKNVISWNSMIGGYSKDRDF 380
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 26/192 (13%)
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE---ESDIFVGNSLIDMYMKCGSVEDG 445
G LL C ++++GR+ H F+S ++D+ + L+ MY C S D
Sbjct: 97 GLLLQLCGEYKNIEIGRKIHN--------FISTSPHFQNDVVLITRLVTMYSICDSPYDS 148
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSH 504
C +F ++ WNA++ G +N +A+ +F +M+ E PD+ T+ V+ AC
Sbjct: 149 CLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVG 208
Query: 505 AGLVEEGRKYFSSMSKEHGLA----PLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQP 558
V G HG A L D + ++ + G+ G ++ A + + MP Q
Sbjct: 209 VYDVRLGEAV-------HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QR 260
Query: 559 DAVIWGSLLAAC 570
+ V W S++ AC
Sbjct: 261 NLVSWNSVMYAC 272
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/624 (34%), Positives = 338/624 (54%), Gaps = 44/624 (7%)
Query: 63 VYAKCGCLYG---ARKVFDKMSNK---NVFTWNSIITGLLKWGFIDDASRLFASMPERDQ 116
V C L+ R V + M K NV+ ++I K G ++DA R+F MP+RD
Sbjct: 139 VLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDL 198
Query: 117 CSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL 176
SW +++ G + EAL F KM SE S L AC K+G +
Sbjct: 199 ASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVC 258
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+S + SD+Y+ +A+IDMY KCG A RVF M ++VSW++LI Y QN ++
Sbjct: 259 AVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQES 318
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
++++ M+ G+ + + SV+ A L K+G ++H +++ E L +D+V+G+AL+
Sbjct: 319 YKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLK-EGLMSDVVVGSALIV 377
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYA CG S+K A +F +++++ WN++
Sbjct: 378 MYANCG-------------------------------SIKEAESIFECTSDKDIMVWNSM 406
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I GY G+ E A FR + P T ++L C + L+ G++ H +V K GL
Sbjct: 407 IVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGL 466
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
++ VGNSLIDMY KCG +E G ++F+ M+ R+ ++N MI C +G G +
Sbjct: 467 GL------NVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKG 520
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
L +++M G +P+ VT I +L ACSHAGL++ G ++SM ++G+ P +HY+CMVD
Sbjct: 521 LAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVD 580
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
L+GRAG LD A I MPM PDA ++GSLL AC++H + L E +A+++L+++ +SG
Sbjct: 581 LIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGH 640
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLLSN+YA RW ++ +VR +++ +G+ K+PG SWI++ + VF HP +I
Sbjct: 641 YVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKI 700
Query: 657 YLVLKMLTREMKRVGYVPNASDDE 680
L L MK Y+ +D+
Sbjct: 701 EETLNSLLLVMKSEDYMLTNVNDK 724
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 240/485 (49%), Gaps = 41/485 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
+ ++ + +G + A F ++P + +WN+++ G F++A+ ++ M
Sbjct: 71 SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVT 130
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y++ L AC+ ++G VH + + ++VY+ A+IDM+ KCG V ARR+
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVHETM-HGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F+ M +R++ SW +LI NG +AL +F +M + G+ PD V +AS++ AC L A
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAV 249
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
K G+ + +R +DL + NA++DMY KCG EA VF M +VVS
Sbjct: 250 KLGMALQVCAVR-SGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVS------- 301
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
W+ LIAGY+QN +E+ L+ + +
Sbjct: 302 ------------------------WSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVA 337
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L A L L+ G++ H V+K GL SD+ VG++LI MY CGS+++ I
Sbjct: 338 TSVLPALGKLELLKQGKEMHNFVLKEGLM------SDVVVGSALIVMYANCGSIKEAESI 391
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
FE ++D + WN+MIVG G A F+++ +P+ +T++ +L C+ G +
Sbjct: 392 FECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGAL 451
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+G++ ++K GL ++D+ + G L+ + + + M M + + ++++
Sbjct: 452 RQGKEIHGYVTKS-GLGLNVSVGNSLIDMYSKCGFLELGEKVFKQM-MVRNVTTYNTMIS 509
Query: 569 ACKVH 573
AC H
Sbjct: 510 ACGSH 514
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 176/387 (45%), Gaps = 63/387 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A +L +C R ++V + ++S F S++++ N +ID+Y KCG A +VF
Sbjct: 232 DSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVF 291
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
M +V +W+++I +G++Q+ + E+
Sbjct: 292 SHMVYSDVVSWSTLI-------------------------------AGYSQNCLYQESYK 320
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ M + A + S L A K G ++H + K SDV +GSALI MY
Sbjct: 321 LYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYA 380
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
CG + A +F+ +++I+ WNS+I Y G A F R+ + P+ +T+ S
Sbjct: 381 NCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVS 440
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C + A ++G +IH + + L ++ +GN+L+DMY+KCG L VF +M +R
Sbjct: 441 ILPICTQMGALRQGKEIHGYVTK-SGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVR 499
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
N V ++N +I+ +G+ E+ L + +K
Sbjct: 500 N-------------------------------VTTYNTMISACGSHGQGEKGLAFYEQMK 528
Query: 378 RESVCPTHYTFGNLLNACANLADLQLG 404
E P TF +LL+AC++ L G
Sbjct: 529 EEGNRPNKVTFISLLSACSHAGLLDRG 555
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/642 (33%), Positives = 336/642 (52%), Gaps = 78/642 (12%)
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
L+K G + DA LF MP ++ +W S++SG+ ++ R AL F M A ++++
Sbjct: 58 LVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFAC 117
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+AL ACA + G QVH+L ++ ++ D ++GS LI+MY +CG + A+ VFD M
Sbjct: 118 NAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDS 177
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
++V + SLI+ + +NG A E ++M+ G++P+E T+ ++++AC + G QI
Sbjct: 178 PDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQI 233
Query: 275 HARLMRCEKLRNDLVLGN-ALVDMYA-------------------------------KCG 302
H L++ LR+ V + AL+D Y+ + G
Sbjct: 234 HGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDG 293
Query: 303 KLNEARCVFDRM------P------------------------------IRNVVSETSMV 326
+L EA VF M P I ++ +++
Sbjct: 294 RLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALL 353
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
S Y + V+ M K+ ++VSW I+ QNG E+A+ L + E P Y
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGY 413
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
F ++L++CA++A L G Q H +K G +S+I GN+LI+MY KCG +
Sbjct: 414 AFSSVLSSCADVASLDQGMQFHCLALKLGC------DSEICTGNALINMYSKCGQMGSAR 467
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
F+ M D SWN++I G AQ+G +AL +F KM G KPD T +GVL C+H+G
Sbjct: 468 LAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSG 527
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
+VEEG +F M ++ P HY CM+D+LGR G DEA +I MP +PDA+IW +L
Sbjct: 528 MVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTL 587
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
LA+CK+HRN+ +G+ A +L+E+ +S YVL+SN+YA G W + +VR+ M + GV
Sbjct: 588 LASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVK 647
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
K GCSWIEI V+ F +D HP + IY +L L M+
Sbjct: 648 KDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 689
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 210/482 (43%), Gaps = 101/482 (20%)
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
S DV + ++ K GR++ A +FD M +N+V+W S+++ Y +NG AL +F
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M+ SG+ P++ + + ACA L A + G Q+H+ +R D +G+ L++MY++CG
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRA-GFAGDAWIGSCLIEMYSRCG 163
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE--------------- 347
L A+ VFDRM +VV TS++S + + + A +ML+
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223
Query: 348 ----------------------RNVVSWNALIAGYTQNGEN------------------- 366
++V S ALI Y++NGE
Sbjct: 224 ACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWC 283
Query: 367 ------------EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
EEAL +F + E V P + +L AC ++ LGRQ H +KH
Sbjct: 284 SMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKH 340
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
L +DI V N+L+ MY + G VE+ + + D VSW I QNG+G
Sbjct: 341 DLI------TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGE 394
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK---DHY 531
+A+ L +M G P+ VL +C+ +++G ++ H LA LK D
Sbjct: 395 KAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF-------HCLA-LKLGCDSE 446
Query: 532 TC----MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
C ++++ + G + A+ + M D W SL+ H + A K L
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSLIHGHAQHGD-------ANKAL 498
Query: 588 EI 589
E+
Sbjct: 499 EV 500
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L SC S+ + H +K SEI N LI++Y+KCG + AR FD M
Sbjct: 415 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 474
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G AQH ++AL F K
Sbjct: 475 THDVTSWNSLI-------------------------------HGHAQHGDANKALEVFSK 503
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL-SKSRYSSDVYMGSALIDMYGKCG 200
M S + +F L C S + G L+ + ++ + +IDM G+ G
Sbjct: 504 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 563
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLIT 225
R A R+ + M E + + W +L+
Sbjct: 564 RFDEALRMINDMPFEPDALIWKTLLA 589
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
E D+ + ++ +K G + D +F+ M ++ V+W +++ G +NG AL +F
Sbjct: 43 AESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMF 102
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
M+ G P+ L AC+ G + G + S++ G A +C++++ R
Sbjct: 103 ADMVESGVAPNDFACNAALVACADLGALRAGEQ-VHSLAVRAGFAGDAWIGSCLIEMYSR 161
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
G L AK + + M PD V + SL++A
Sbjct: 162 CGSLPAAKEVFDRMD-SPDVVGYTSLISA 189
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 342/668 (51%), Gaps = 72/668 (10%)
Query: 13 DLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
D AF+ D + +L C R + + + VH +K E+ + N L+D+Y+K
Sbjct: 269 DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSK----- 323
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
WG I D+ +F ++ SWN+MV GF+
Sbjct: 324 --------------------------WGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGD 357
Query: 132 FSEALGYFVKM--HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
+M SE+ E + +A+ C ++H K + D +
Sbjct: 358 IHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLA 417
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+A + Y KCG +S A+RVF G+R + + SWN+LI Y Q+ +L+ ++M SG+
Sbjct: 418 NAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLL 477
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD T+ S++SAC+ L + + G ++H ++R L DL + +++ +Y CG+L +
Sbjct: 478 PDNFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQV 536
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+FD M + ++VSWN +I G+ QNG E A
Sbjct: 537 LFDAME-------------------------------DNSLVSWNTVITGHLQNGFPERA 565
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
LGLFR + + P + + AC+ L L+LGR+AH + +KH L E + F+
Sbjct: 566 LGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLL------EDNAFIA 619
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
S+IDMY K G++ ++F + E+ SWNAMI+G +G EA+ LF++M G
Sbjct: 620 CSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRN 679
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
PD +T +GVL AC+H+GL+ EG +Y M GL P HY C++D+LGRAG LD A
Sbjct: 680 PDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR 739
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
+ M +PD IW SLL+ C++H+N+ +GE VA KL +EP YVLLSN+YA LG+
Sbjct: 740 VAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGK 799
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W +V +VR+ M++ + K GCSWIE+ G V F+V ++ +EI + +L ++ +
Sbjct: 800 WDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWK 859
Query: 670 VGYVPNAS 677
+GY P+ S
Sbjct: 860 MGYRPDTS 867
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 157/647 (24%), Positives = 278/647 (42%), Gaps = 128/647 (19%)
Query: 5 RSVKQIVGD------LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQ 57
R V++ GD + L LL + + K + R++H + S + S+ +
Sbjct: 64 RVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLC 123
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
R+I +YA CG +R FD + +KN+F
Sbjct: 124 TRIITMYAMCGSPDDSRSAFDALRSKNLF------------------------------- 152
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHAL 176
WN+++S +++++ + E L F+KM S+ L + ++F + ACAG D +G VH L
Sbjct: 153 QWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGL 212
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ K+ D+++G+AL+ YG G VS A ++FD M ERN+VSWNS+I + NG
Sbjct: 213 VVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD---- 268
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
PD T+ +V+ CA G +H ++ L +LV+ NAL+D
Sbjct: 269 --------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKL-SLDKELVVNNALMD 319
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML---------E 347
MY+K G + +++ +F +NVVS +MV G++ + + +ML E
Sbjct: 320 MYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADE 379
Query: 348 RNVVS--------------------------------WNALIAGYTQNGENEEALGLFRL 375
+++ NA +A Y + G A +F
Sbjct: 380 VTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHG 439
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK---------------------- 413
++ +++ ++ L+ A +D +L AH +
Sbjct: 440 IRSKTL----NSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKS 495
Query: 414 -------HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
HG + E D+FV S++ +Y+ CG + +F+ M + VSWN +I G
Sbjct: 496 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITG 555
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
QNG+ ALGLF++M+L G +P ++M+ V ACS + GR+ + K H L
Sbjct: 556 HLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALK-HLLED 614
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++D+ + G + ++ + + + A W +++ +H
Sbjct: 615 NAFIACSIIDMYAKNGAITQSSKVFNGLK-EKSAASWNAMIMGYGMH 660
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 62/312 (19%)
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +IH + +LR+D VL ++ MYA CG +++R
Sbjct: 103 GRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSA-------------------- 142
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFG 389
F + +N+ WNA+I+ Y++N E L +F +++ + + P ++TF
Sbjct: 143 -----------FDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFP 191
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++ ACA ++D+ +G H VVK GL D+FVGN+L+ Y G V D ++F
Sbjct: 192 CVIKACAGISDVGIGLAVHGLVVKTGLV------EDLFVGNALVSFYGTHGFVSDALKLF 245
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M ER+ VSWN+MI + NG G F PD T++ VL C+ +
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGDD----GAF--------MPDVATVVTVLPVCAREREIG 293
Query: 510 EGRKYFS-----SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
G+ S+ KE + ++D+ + GC+ +++ +I + + V W
Sbjct: 294 VGKGVHGWAVKLSLDKELVVN------NALMDMYSKWGCIIDSQ-MIFKLNNNKNVVSWN 346
Query: 565 SLLAACKVHRNI 576
+++ +I
Sbjct: 347 TMVGGFSAEGDI 358
>gi|449453105|ref|XP_004144299.1| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Cucumis sativus]
Length = 638
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 352/651 (54%), Gaps = 44/651 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S ++ L+ CL SV + + +H +++K S F+ NR + +YA G ++ KVFD
Sbjct: 17 SHYSSLIRRCLVLGSVHNAKTIHGQLLKLGLDSNTFLANRCLQLYALFGPVHDVLKVFDG 76
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +KN+ +WN + G+ ++G +D A LF MPERD SWN+M+SG+ + A+G
Sbjct: 77 IKDKNIISWNICLKGMFRFGDVDGARHLFDVMPERDIVSWNTMISGYVSSGFGNSAMGVS 136
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGK 198
++M + F SEY+F LS + + G QVH + +S S + +G++LIDMYGK
Sbjct: 137 LEMQNAGFRPSEYTFSILLSLVSSAFH---GKQVHGSMIRSGVDVSSMVLGNSLIDMYGK 193
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G V +F M + +++SWNSLI ++G AL F M + PD+ T++ V
Sbjct: 194 VGLVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMV 253
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+S C L + G QI A + N +VL +A +D+++KC
Sbjct: 254 ISICCCLQELELGKQIFAFCFKMGFTSNSIVL-SATIDLFSKC----------------- 295
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
S+K A +F + + V N +I+ + +G +++ LF R
Sbjct: 296 --------------DSLKVAVQLFEDTNQWDPVLCNVMISSFAWHGHWRDSMWLFVYTLR 341
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E++ P T ++L++ + ++LG Q H V+K G +SD+ V +SL+DMY K
Sbjct: 342 ENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLGF------QSDVIVTSSLVDMYAK 395
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
GS++D ++F M RD +SWN MI+G NG EAL F K+++ G PD +T+ GV
Sbjct: 396 VGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGV 455
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACS+AGLVEEG FS M+ EHG+ P +HY+C+V+LL RAG +EA +I+ QP
Sbjct: 456 LLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRAGKFEEAVNIIKTTLYQP 515
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+ W SLL C +H ++ + E VA+ ++++EP +S PY +L+ YA +W +VRV+K
Sbjct: 516 TSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKK 575
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKE-IYLVLKMLTREMK 668
K CSWI + F D+ L++E I VL+++ E++
Sbjct: 576 TWENIATQKVKACSWIVTKDYAYAFQ-DDQLQLLSRENIISVLELIIWEIE 625
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/528 (38%), Positives = 298/528 (56%), Gaps = 44/528 (8%)
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
S+ +G L+ Y CG R +FD + ++N+V +N +I Y N SDAL VF M
Sbjct: 1058 SNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNM 1117
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
GI+PD T V+ A + G+QIHA ++R L ++ +GN L+ MY KCG
Sbjct: 1118 AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRV-GLDLNVFVGNGLISMYGKCGC 1176
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA------------------------- 338
L EA V D MP R+VVS S+V+G A+ A
Sbjct: 1177 LVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA 1236
Query: 339 ------------RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
+ MF K+ +++VSWN +IA Y N EA+ +F ++ +V P
Sbjct: 1237 VTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAI 1296
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
+ ++L AC +L+ L LGR+ H +VV+ L + ++ + N+LIDMY KCG +E
Sbjct: 1297 SIASVLPACGDLSALLLGRRIHEYVVRKRL------QPNLLLENALIDMYAKCGCLEYAR 1350
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F+ M RD VSW +MI NG G +A+ LF +M G PD + + VL ACSHAG
Sbjct: 1351 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 1410
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
L++EGR YF M++E + P +H+ CMVDLLGRAG +DEA I+ MPM+P+ +WG+L
Sbjct: 1411 LLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGAL 1470
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L+AC+V+ N+++G A +L ++ P SG YVLLSN+YA+ GRW +V VR +M+ +G+
Sbjct: 1471 LSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 1530
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
K PG S E+ V+ F+ D+ HP +K+IY L +L +MK GYVP
Sbjct: 1531 KMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVP 1578
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 39/316 (12%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++HA +++ +F+ N LI +Y KCGCL A +V D+M ++V +WNS++ G + G
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNG 1206
Query: 100 FIDDA-------------------------------------SRLFASMPERDQCSWNSM 122
DDA +F + + SWN M
Sbjct: 1207 QFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVM 1266
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
++ + + +EA+ F++M S S L AC +G ++H + + R
Sbjct: 1267 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRL 1326
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++ + +ALIDMY KCG + AR VFD M+ R++VSW S+I+ Y NG DA+ +F R
Sbjct: 1327 QPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSR 1386
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKC 301
M G+ PD + SV+SAC+ EG + + +LM E K+ + +VD+ +
Sbjct: 1387 MQDLGLNPDSIAFVSVLSACSHAGLLDEG-RYYFKLMTEECKIVPRIEHFVCMVDLLGRA 1445
Query: 302 GKLNEARCVFDRMPIR 317
G+++EA +MP+
Sbjct: 1446 GQVDEAYGFIKQMPME 1461
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 223/511 (43%), Gaps = 93/511 (18%)
Query: 39 RRVHARI-IKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
+++H++I I S + +L+ YA CG + R +FD++ KNV +N
Sbjct: 1044 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNV------- 1096
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
M+ + + +S+AL F M Y++
Sbjct: 1097 ------------------------MIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCV 1132
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L A +GS D +G Q+HA + + +V++G+ LI MYGKCG + A RV D M R++
Sbjct: 1133 LKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDV 1192
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA----CASLAAFKEGLQ 273
VSWNSL+ +NG DALEV M G++PD T+AS++ A C +F
Sbjct: 1193 VSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSF----- 1247
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP------------------ 315
+ M + LV N ++ +Y EA +F +M
Sbjct: 1248 --VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305
Query: 316 ----------------IR-----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+R N++ E +++ YAK ++ AR +F +M R+VVSW
Sbjct: 1306 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWT 1365
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++I+ Y NG+ +A+ LF ++ + P F ++L+AC++ L GR + ++
Sbjct: 1366 SMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR-YYFKLMTE 1424
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYG 473
+ + E FV ++D+ + G V++ + M +E + W A++ C Y
Sbjct: 1425 ECKIVPRIEH--FV--CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSAC--RVYS 1478
Query: 474 TEALGLF---KKMLLCGEKPDHVTMIGVLCA 501
+GL + LC E+ + ++ + A
Sbjct: 1479 NMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 1509
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 82/310 (26%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A +L +C ++ RR+H +++ + + ++N LID+YAKCGCL AR+VF
Sbjct: 1294 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 1353
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M ++V +W SM+S + + + +A+
Sbjct: 1354 DQMKFRDVVSW-------------------------------TSMISAYGMNGKGRDAVS 1382
Query: 138 YFVKMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGS 190
F +M +F S LSAC AG +D FK+ T+ ++ + +
Sbjct: 1383 LFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPR------IEHFV 1436
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++D+ G+ G+V D F++ M +EP
Sbjct: 1437 CMVDLLGRAGQV--------------------------------DEAYGFIKQMP--MEP 1462
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMR-CEKLRNDLVLGNALVDMYAKCGKLNEARC 309
+E +++SAC + GL +L + C + VL L ++YAK G+ +
Sbjct: 1463 NERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVL---LSNIYAKAGRWEDVTT 1519
Query: 310 VFDRMPIRNV 319
V M + +
Sbjct: 1520 VRSIMKTKGI 1529
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/684 (31%), Positives = 351/684 (51%), Gaps = 85/684 (12%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ S+ + LL C+ + S+ R +H ++K+ ++++F+ L++ Y +C
Sbjct: 76 VQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRC--------- 126
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
G DA LF MPE++ +W ++++G+ + + EAL
Sbjct: 127 ----------------------GASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEAL 164
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV+M S Y+ G+ L+AC+ S + +G+QVH K R S +G++L MY
Sbjct: 165 EVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMY 224
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLIT-CYEQNGPASDALEVFVRMMASGIEPDEVTL 255
K G + A R F + ++N+++W ++I+ C E L +F+ M+ G+ P+E TL
Sbjct: 225 AKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTL 284
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKL--RNDLVLGNALVDMYAKCGKLNEARCVFDR 313
SV+S C + G Q+ A C K+ + ++ + N+ + +Y + G+ +EA F+
Sbjct: 285 TSVMSLCGTRLDLNLGKQVQAF---CFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEE 341
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE------ 367
M + ++++WNA+I+GY Q E
Sbjct: 342 MD-------------------------------DVSIITWNAMISGYAQIMETAKDDLHA 370
Query: 368 -----EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
+AL +FR LKR ++ P +TF ++L+ C+++ L+ G Q H +K G FLS
Sbjct: 371 RSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTG--FLS-- 426
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D+ V ++L++MY KCG +ED + F M R V+W +MI G +Q+G EA+ LF+
Sbjct: 427 --DVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFED 484
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
M G +P+ +T + VL ACS+AGL E+ YF M +E+ + P+ DHY CMVD+ R G
Sbjct: 485 MRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLG 544
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
LD+A I +P+ IW SL+A C+ H N+ L Y A +L+E+ P YVLL N
Sbjct: 545 RLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLN 604
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
MY RW +V RVRKLM++ G+ SWI I V F DK H L+ E+Y +L+
Sbjct: 605 MYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLEN 664
Query: 663 LTREMKRVGYVPNASDDEAYEEQN 686
L + K +GY P S + + E +
Sbjct: 665 LLEKAKTIGYEPYQSAELSDSEDD 688
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/675 (34%), Positives = 351/675 (52%), Gaps = 133/675 (19%)
Query: 13 DLAFL-DSS---PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
D FL DSS PFAK L HA ++ + IFI RL+++YA G
Sbjct: 21 DFNFLFDSSTKTPFAKCL---------------HALLVVAGKVQSIFISTRLVNLYANLG 65
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
+ +R FD++ P++D +WNSM+S +
Sbjct: 66 DVSLSRCTFDQI-------------------------------PQKDVYAWNSMISAYVH 94
Query: 129 HDRFSEALGYFVKMHSENFALSE-----YSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
+ F EA+G F ++ +SE Y+F L AC VD G ++H K +
Sbjct: 95 NGHFHEAIGCFYQL----LLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQ 147
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+V++ ++LI MY + G AR +FD M R++ SWN++I+ QNG A+ AL+V M
Sbjct: 148 WNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 207
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
GI+ + VT+ S++ VDMYAK G
Sbjct: 208 RLEGIKMNFVTVVSILP--------------------------------VFVDMYAKLGL 235
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
L+ A VF+ +P+++V+S ++++GYA QN
Sbjct: 236 LDSAHKVFEIIPVKDVISWNTLITGYA-------------------------------QN 264
Query: 364 GENEEALGLFRLLKR-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EA+ ++++++ + + P T+ ++L A A++ LQ G + H V+K L
Sbjct: 265 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL---- 320
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
D+FV LID+Y KCG + D +F + + V+WNA+I +G+ + L LF +
Sbjct: 321 --DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGE 378
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAG 542
ML G KPDHVT + +L ACSH+G VEEG+ F M +E+G+ P HY CMVDLLGRAG
Sbjct: 379 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAG 437
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSN 602
L+ A I+ MP+QPDA IWG+LL AC++H NI LG++ + +L E++ N G YVLLSN
Sbjct: 438 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 497
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
+YA +G+W V +VR L R+RG+ K PG S IE+ V+VF ++ HP KEIY L++
Sbjct: 498 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 557
Query: 663 LTREMKRVGYVPNAS 677
LT +MK +GY+P+ S
Sbjct: 558 LTAKMKSLGYIPDYS 572
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/588 (37%), Positives = 326/588 (55%), Gaps = 47/588 (7%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N+++ + G DA ++F M E D SW + A +D EA F + S N
Sbjct: 258 NALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIG--AAYDAI-EAFELFRLVLSGNME 314
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
++EY + LSA K G Q+ L K+ Y + +ALI MYGKCG + AR +
Sbjct: 315 VNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHI 374
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD M + VSWNSLI Y +NG AL+VF +M ++P++ TLAS++ A+
Sbjct: 375 FDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFP 434
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
++ +QIH+ +++ + +D +L + L+ Y KC + E++ V+ S+ S +
Sbjct: 435 EQAMQIHSYIVKLGFIVDDSML-SCLITAYGKCNMICESKRVY---------SDISQI-- 482
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL---LKRESVCPTH 385
NV+ NA+ A G + +AL LF+ L +E C
Sbjct: 483 --------------------NVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDC--- 519
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T +L AC L DL+ GR H+ +K SG D FV +++ID+Y KCG+V++
Sbjct: 520 ITLSIVLKACGALTDLEYGRNIHSMALK------SGMSQDNFVESAVIDVYCKCGTVDEA 573
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+ F + + + V+WNAM++G AQ+G E LF KML G +PD +T +GVL +C HA
Sbjct: 574 AKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHA 633
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLV E Y SSM + HG+ P +HY CM+DL GR G L++AK I+ MP+ PDA IW
Sbjct: 634 GLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQI 693
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL+ C +H N+ LGE AKKL+E++P N YVLLSN+YA GRW V ++R++M+K+ +
Sbjct: 694 LLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKII 753
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
K+PG SWI++ G V+ F D HP +KEIY+ L+ L EM Y+
Sbjct: 754 CKEPGSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEMFASPYL 801
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 233/511 (45%), Gaps = 62/511 (12%)
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A V KM N F + ++ G K G +D A + F D W +MV GF + F
Sbjct: 140 AHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEF 199
Query: 133 SEALGYFVKMHSENFAL--SEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVYM 188
+ FV+M L +E+S S L A + D + G QV L K +++
Sbjct: 200 EKGREVFVEMRGLGLGLELNEFSLTSVLGALS---DVREGEQVFGLSVKMGLLCGCSIHL 256
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF--VRMMAS 246
+AL++MY +CG S A ++FD M E ++VSW E+ G A DA+E F R++ S
Sbjct: 257 NNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWT------ERIGAAYDAIEAFELFRLVLS 310
Query: 247 G-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV--LGNALVDMYAKCGK 303
G +E +E L +V+SA K G QI C+K LV + NAL+ MY KCG+
Sbjct: 311 GNMEVNEYMLINVLSAMREPKLLKSGRQIQG---LCQKAGYLLVASVNNALIFMYGKCGE 367
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+ AR +FD M + VS S+++GYA +N
Sbjct: 368 MVAARHIFDEMLCGDSVSWNSLIAGYA-------------------------------EN 396
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G ++AL +F ++ + P YT ++L AN + Q H+++VK G
Sbjct: 397 GLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIV----- 451
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
D + + LI Y KC + + R++ + + + + NAM G +AL LF+
Sbjct: 452 -DDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTG 510
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
++ D +T+ VL AC +E GR SM+ + G++ + ++D+ + G
Sbjct: 511 WRLHQEVDCITLSIVLKACGALTDLEYGRN-IHSMALKSGMSQDNFVESAVIDVYCKCGT 569
Query: 544 LDE-AKTLIEAMPMQPDAVIWGSLLAACKVH 573
+DE AKT + + + V W +++ H
Sbjct: 570 VDEAAKTFMNV--SKNNLVAWNAMVMGYAQH 598
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 234/560 (41%), Gaps = 102/560 (18%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRL 60
+AT Q + L P A + L ++D + +A +KS FA + F+ + +
Sbjct: 4 LATHSDALQSIKTLVLKRLYPQALRASASLLHPPLTD--QSYALFLKSGFALDAFLSSFI 61
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
++ +A G AR R P D SWN
Sbjct: 62 VNRFAISGDFARAR-------------------------------RFLLDTPYPDTVSWN 90
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSAC--------AGSVDFKMGTQ 172
S++SG+A+ + F + + E+S S + C A V KMG
Sbjct: 91 SLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMG-- 148
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
LL+ ++ S L+D Y K G V A + F + V W +++ + NG
Sbjct: 149 ---LLNG-------FVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGE 198
Query: 233 ASDALEVFVRM--MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-DLV 289
EVFV M + G+E +E +L SV+ A L+ +EG Q+ ++ L +
Sbjct: 199 FEKGREVFVEMRGLGLGLELNEFSLTSVLGA---LSDVREGEQVFGLSVKMGLLCGCSIH 255
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
L NAL++MY++CG +K+ ++K MF +M E +
Sbjct: 256 LNNALMNMYSRCG---------------------------SKSDAIK----MFDEMTEPD 284
Query: 350 VVSWNALI-AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
VVSW I A Y + EA LFRL+ ++ Y N+L+A L+ GRQ
Sbjct: 285 VVSWTERIGAAY----DAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQ 340
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
K G ++ V N+LI MY KCG + IF+ M+ D VSWN++I G A
Sbjct: 341 GLCQKAGYLLVAS------VNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYA 394
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+NG +AL +F +M +P+ T+ +L +++ E+ + S + K G
Sbjct: 395 ENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVK-LGFIVDD 453
Query: 529 DHYTCMVDLLGRAGCLDEAK 548
+C++ G+ + E+K
Sbjct: 454 SMLSCLITAYGKCNMICESK 473
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 190/419 (45%), Gaps = 52/419 (12%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ AL A A + + Q +AL KS ++ D ++ S +++ + G + ARR
Sbjct: 23 YPQALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTP 82
Query: 214 ERNIVSWNSLITCY---EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
+ VSWNSLI+ Y Q GP D +F + SG+ PDE +L+S+V C L
Sbjct: 83 YPDTVSWNSLISGYARFRQPGPVFD---LFNGLRRSGLSPDEFSLSSLVKGCGVLE---- 135
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
+N++ G L +M + N + ++ GYA
Sbjct: 136 --------------QNEVAHGVCL------------------KMGLLNGFVVSGLLDGYA 163
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K V SA F + + V W A++ G+ NGE E+ +F ++ + F +
Sbjct: 164 KLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEF-S 222
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L + L+D++ G Q VK GL L G I + N+L++MY +CGS D ++F+
Sbjct: 223 LTSVLGALSDVREGEQVFGLSVKMGL--LCG--CSIHLNNALMNMYSRCGSKSDAIKMFD 278
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M E D VSW I G A + EA LF+ +L + + +I VL A L++
Sbjct: 279 EMTEPDVVSWTERI-GAAYD--AIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKS 335
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
GR+ + ++ G + ++ + G+ G + A+ + + M + D+V W SL+A
Sbjct: 336 GRQ-IQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEM-LCGDSVSWNSLIAG 392
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 35/365 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A +L+ S ++H+ I+K F + + + LI Y KC + +++V+ +S
Sbjct: 421 LASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDIS 480
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
NV N++ L+ G DA +LF Q W +
Sbjct: 481 QINVLHLNAMAATLVHAGCHADALKLF-------QTGW---------------------R 512
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+H E + + L AC D + G +H++ KS S D ++ SA+ID+Y KCG
Sbjct: 513 LHQE---VDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGT 569
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A + F + + N+V+WN+++ Y Q+G + E+F +M+ GI+PDE+T V+++
Sbjct: 570 VDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNS 629
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI-RNVV 320
C E + ++ + L ++D++ + G L +A+ D+MPI +
Sbjct: 630 CCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQ 689
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLK 377
++SG +V + K++E N ++ L Y G L R++K
Sbjct: 690 IWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMK 749
Query: 378 RESVC 382
++ +C
Sbjct: 750 KKIIC 754
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + +L +C + R +H+ +KS + + F+++ +IDVY KCG + A K
Sbjct: 517 VDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKT 576
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +S N+ WN +MV G+AQH + E
Sbjct: 577 FMNVSKNNLVAWN-------------------------------AMVMGYAQHGCYHEVF 605
Query: 137 GYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
F KM E ++ L++C AG V+ + T + ++L + + +ID
Sbjct: 606 ELFNKMLELGIQPDEITYLGVLNSCCHAGLVN-EAHTYLSSMLELHGVVPCLEHYACMID 664
Query: 195 MYGKCGRVSCARRVFDGM 212
++G+ G + A+R D M
Sbjct: 665 LFGRVGLLEDAKRTIDQM 682
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/720 (32%), Positives = 367/720 (50%), Gaps = 131/720 (18%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
L + P LL +C KS + +++H++IIK+ + F ++LI+ A
Sbjct: 29 LLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCA---------- 75
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+ +G + A LF S+ + +Q WN+M+ G + A
Sbjct: 76 -------------------ISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGA 116
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ ++V+M + Y+F L +CA + G Q+H + K SD ++ ++LI+M
Sbjct: 117 IDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINM 176
Query: 196 YGKCGRVSCA-------------------------------RRVFDGMRERNIVSWNSLI 224
Y + G + A RR+F+ + R+ VSWN++I
Sbjct: 177 YAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMI 236
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y Q+G +AL F M + + P+E T+ +V+SACA + + G + + + L
Sbjct: 237 AGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS-WIEDHGL 295
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
++L L NAL+DMY+KCG L++AR +F
Sbjct: 296 GSNLRLVNALIDMYSKCGDLDKARD-------------------------------LFEG 324
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
+ E++++SWN +I GY+ +EAL LFR +++ +V P TF ++L ACA L L LG
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ H ++ K +FL + ++ SLIDMY KCG++E ++F M + SWNAMI
Sbjct: 385 KWIHAYIDK---KFLGLTNTSLWT--SLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A +G+ AL LF++M G +PD +T +GVL ACSHAGLVE GR+ FSSM +++ +
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
+P HY CM+DLLGRAG DEA+ L++ M M+PD IWGSLL AC+VH N+ LGE+ AK
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
L E+EP N G YVLLSN+YA GRW +V R+R + +G+ K
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKX---------------- 603
Query: 645 VKDKRHPLNKEIYLVLKMLTREM-KRVGYVPNASD-----DEAYEEQNGSNSTSDCQIDF 698
++IY +L + + +R G VP+ S+ DE ++E + S+ + I F
Sbjct: 604 ---------QDIYKMLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAF 654
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 321/558 (57%), Gaps = 38/558 (6%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS+++GF + F E L F+ + L ++F L AC + K+G +H+L+
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K ++ DV ++L+ +Y GR++ A ++FD + +R++V+W +L + Y +G +A++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F +M+ G++PD + V+SAC + G I + E +N V
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV--------- 249
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
T++V+ YAK ++ AR +F M+E+++V+W+ +I
Sbjct: 250 -----------------------RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY N +E + LF + +E++ P ++ L++CA+L L LG + + +H F
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH--EF 344
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
L+ ++F+ N+LIDMY KCG++ G +F+ M E+D V NA I G A+NG+ +
Sbjct: 345 LT----NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F + G PD T +G+LC C HAGL+++G ++F+++S + L +HY CMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG LD+A LI MPM+P+A++WG+LL+ C++ ++ L E V K+L+ +EP N+G YV
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LSN+Y+ GRW E VR +M K+G+ K PG SWIE+ G V+ F+ DK HPL+ +IY
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYA 580
Query: 659 VLKMLTREMKRVGYVPNA 676
L+ L EM+ +G+VP
Sbjct: 581 KLEDLGNEMRLMGFVPTT 598
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 199/459 (43%), Gaps = 81/459 (17%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+L F +L +C R+ S +H+ ++K F ++ L+ +Y+ G L
Sbjct: 108 YLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL----- 162
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+DA +LF +P+R +W ++ SG+ R EA
Sbjct: 163 --------------------------NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F KM Y LSAC D G + + + + ++ + L+++
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG++ AR VFD M E++IV+W+++I Y N + +E+F++M+ ++PD+ ++
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S+CASL A G + + R E L N L + NAL+DMYAKCG + VF M
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++V + +SG AK NG + + +F
Sbjct: 376 EKDIVIMNAAISGLAK-------------------------------NGHVKLSFAVFGQ 404
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS---- 431
++ + P TF LL C H +++ GLRF + + +
Sbjct: 405 TEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 432 --LIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D++ + G ++D R+ M R + + W A++ GC
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 196/425 (46%), Gaps = 42/425 (9%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+H L D ++ + L+ + + +F + NI +NSLI + N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ L++F+ + G+ T V+ AC ++ K G+ +H+ +++C +D+
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC-GFNHDVAAM 149
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+L+ +Y+ G+LN+A +FD +P R+VV+ T++ SGY
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY---------------------- 187
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
T +G + EA+ LF+ + V P Y +L+AC ++ DL G +
Sbjct: 188 ---------TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW----I 234
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK+ + S FV +L+++Y KCG +E +F++MVE+D V+W+ MI G A N
Sbjct: 235 VKYMEEMEMQKNS--FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ E + LF +ML KPD +++G L +C+ G ++ G S + + L L
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MA 351
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA--ACKVHRNIMLGEYVAKKLLEI 589
++D+ + G + + + M + D VI + ++ A H + + + L I
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 590 EPSNS 594
P S
Sbjct: 411 SPDGS 415
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++L +C+ + + + + + F++ L+++YAKCG + AR V
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV- 269
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F SM E+D +W++M+ G+A + E +
Sbjct: 270 ------------------------------FDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M EN ++S LS+CA +G +L+ + + ++++M +ALIDMY
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG ++ VF M+E++IV N+ I+ +NG + VF + GI PD T
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C ++GL+ + L+ + +VD++ + G L++A + MP+R
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
N + +++SG + A + +++ + WNA Y Q
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIA--LEPWNA--GNYVQ 521
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 328/621 (52%), Gaps = 46/621 (7%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ +L +C + + +H R+ ++ + + N L+D+Y KCG L ARKVFD +
Sbjct: 108 YSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDIL 167
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +WN++I+G K G +++A LF MPE D SWNS+++GF + AL +
Sbjct: 168 CPSSTSWNTMISGYGKEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLG-ALRFVCM 226
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
MH + L ++F AL C M Q+H ++KS + S + SAL+D Y C
Sbjct: 227 MHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNE 286
Query: 202 VSCARRVFDGMR--ERNIVS----WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
+ A ++FD +I+ WNS+++ Y N S A+ + ++ + G D T
Sbjct: 287 LDEAIKMFDEYSCCSASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTF 346
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S + C +L F+ GLQ+ L D V+G+ L+D+YA GK
Sbjct: 347 GSALKVCINLQNFRLGLQVQG-LAVTSGYELDYVVGSILIDLYANDGK------------ 393
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+K A +F ++ E+++V W++LI+ T+ G N LFR
Sbjct: 394 -------------------IKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRD 434
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + + ++L AC++L L G+Q H+ VK SG ES+ SLID+
Sbjct: 435 MVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVK------SGYESERITVTSLIDL 488
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCG +EDG +F ERD V + +I+GC QNG EA+G F++M+ G KP+ +T
Sbjct: 489 YAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITF 548
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL AC HAGLVEE F M E+ + P +HY C+V+LL +AGC EA+ LI MP
Sbjct: 549 LGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMP 608
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PD IW SLL AC H+ L ++A++LL P + V LSN+YA L W + +
Sbjct: 609 FEPDQTIWNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLSNVYATLEMWDDSRK 668
Query: 616 VRKLMRKRGVVKQPGCSWIEI 636
+R++++K G +K+ G SWI+I
Sbjct: 669 MREVIKKVG-MKEAGKSWIQI 688
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 252/588 (42%), Gaps = 102/588 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D ++ C R ++ R +HA IIK +++F N L+ +Y
Sbjct: 1 MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVD---------- 50
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
LLK DA RLF ER+ +W +M+S ++ R AL
Sbjct: 51 ----------------ISLLK-----DARRLFDETLERNVATWTTMISAYSSSGRPDTAL 89
Query: 137 GYFVKM-HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
++V+M S++ + + + + L AC D + G +H + ++ D + + L+DM
Sbjct: 90 KFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVLMNTLLDM 149
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG +S AR+VFD + + SWN++I+ Y + G +A+ +F +M EPD V+
Sbjct: 150 YVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMP----EPDTVSW 205
Query: 256 ASVVSACA---SLAAFKEGLQIHARLMRCEKLRNDLVL---------------------- 290
S+++ SL A + +H + ++ + L
Sbjct: 206 NSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCYVNKS 265
Query: 291 --------GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+ALVD Y+ C +L+EA +FD S SA ++
Sbjct: 266 GFGSCCFTASALVDSYSNCNELDEAIKMFDEY-------------------SCCSASILD 306
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
L WN++++GY N +N A+ L + +TFG+ L C NL + +
Sbjct: 307 CLPL------WNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFR 360
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
LG Q GL SG E D VG+ LID+Y G ++D R+F + E+D V W++
Sbjct: 361 LGLQV------QGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSS 414
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
+I C + G + LF+ M+ + D + VL ACS + G++ S K
Sbjct: 415 LISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKS- 473
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G + T ++DL + G +++ L + D V + ++ C
Sbjct: 474 GYESERITVTSLIDLYAKCGEIEDGLALFYCTS-ERDTVCYTGIIMGC 520
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 135/311 (43%), Gaps = 31/311 (9%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
V QI A +DS F L C+ ++ +V + S + + + + LID+YA
Sbjct: 331 VSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYAN 390
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G + A ++F ++ K++ W+S+I+ K G NS+V
Sbjct: 391 DGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGL-------------------NSLV--- 428
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
F M + + + ++ S L AC+ V G QVH+ KS Y S+
Sbjct: 429 ---------FSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESER 479
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++LID+Y KCG + +F ER+ V + +I QNG A +A+ F M+
Sbjct: 480 ITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIEL 539
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++P+E+T V+SAC +E I + K+ + +V++ ++ G E
Sbjct: 540 GLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKE 599
Query: 307 ARCVFDRMPIR 317
A + MP
Sbjct: 600 AEELIAEMPFE 610
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/744 (31%), Positives = 364/744 (48%), Gaps = 116/744 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LDS + +L C+R + +H I+K ++F N L++ Y K G
Sbjct: 47 LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAG-------- 98
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDK DA LF MPER+ S+ ++ G+A D +
Sbjct: 99 FDK-----------------------DALNLFDEMPERNNVSYVTLTQGYACQD----PV 131
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
G + ++H E L+ + F S L ++ +H+ + K Y S+ ++G+ALI+ Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
CG V AR VF+G+ ++IV W +++CY +NG D+L++ RM G P+ T
Sbjct: 192 SVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFD 251
Query: 257 SVVSACASLAAFKEGLQIHARLMR-CEKL-----------------------------RN 286
+ + A L AF +H ++++ C +L +N
Sbjct: 252 TALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN 311
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMP----IRNVVSETSMVSG-------------- 328
D+V + ++ + + G N+A +F RM + N + +S+++G
Sbjct: 312 DVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 329 ---------------------YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
YAK + +A +F ++ +NVVSWN +I GY GE
Sbjct: 372 GLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGG 431
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
+AL +FR R V T TF + L ACA+LA ++LG Q H GL + +
Sbjct: 432 KALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVH------GLAIKTNNAKRVA 485
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V NSLIDMY KCG ++ +F M D SWNA+I G + +G G +AL +F M
Sbjct: 486 VSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSD 545
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
KP+ +T +GVL CS+AGL+++G+ F SM +HG+ P +HYTCMV L GR+G LD+A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKA 605
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
LIE +P +P +IW ++L+A N A+++L+I P + YVLLSNMYA
Sbjct: 606 MNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGA 665
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+W V +RK M+++GV K+PG SWIE G V+ F V HP K I +L+ L +
Sbjct: 666 KQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKA 725
Query: 668 KRVGYVPNAS------DDEAYEEQ 685
R GYVP+ + DDE +++
Sbjct: 726 TRAGYVPDRNAVLLDMDDEEKDKR 749
>gi|297744236|emb|CBI37206.3| unnamed protein product [Vitis vinifera]
Length = 664
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/634 (34%), Positives = 346/634 (54%), Gaps = 30/634 (4%)
Query: 29 CLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTW 88
CL + + + R + + + L+ ++K G + AR +F+ M +NV T+
Sbjct: 51 CLSQQRLREARHMLDEMPNRGVLDRVVCWTSLLSKFSKNGFIDEARALFEIMPERNVVTY 110
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N++++G ++ G + DA R F MPER+ SW S++ G A R EA F M N
Sbjct: 111 NAMLSGYVQCGRLSDACRFFEEMPERNVVSWTSLLCGLANAGRIGEARELFNVMPERNVV 170
Query: 149 LSEYSFGSALSACAGSVDFKMGTQV-HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
S+ S L S + +V + + KS+ S +V +I Y + R+ AR
Sbjct: 171 ----SWNSMLVGLIRSGQLEEARRVFNEMPVKSQVSWNV-----MIAGYAEHSRMEEARV 221
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+FDGM +RN+V+W S+I+ Y + G + +F +M E + V+ +++ A
Sbjct: 222 LFDGMGDRNVVTWTSMISGYCRAGNVQEGYCLFQKM----PERNVVSWTAMIGGFAWNGF 277
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+KE L + + N++++ Y + G+L +A+ +FD +P+R+ +S TSM++
Sbjct: 278 YKEALN---------SMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDKISWTSMIN 328
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
GY + A +F M +R+ V+W +++G+ QN EA LF ++ + V P + T
Sbjct: 329 GYFNVGQIAKACYLFNNMPDRDAVAWTVMVSGHVQNELFAEATYLFSEMRVKGVSPLNST 388
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F LL A +A L GRQ H ++K F D+ + NSLI MY KCG + D
Sbjct: 389 FSILLGAAGAMAYLDQGRQFHCLLMKTQFEF------DLILQNSLISMYAKCGEIGDAYS 442
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
IF M+ RD +SWN+MI+G + +G +EAL +F+ ML G P+ VT +G+L ACSHAGL
Sbjct: 443 IFSKMISRDLISWNSMIMGFSHHGLTSEALKVFEAMLTSGTHPNSVTFLGILSACSHAGL 502
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ +G + F +MS + P +HY CMV+LLGRAG ++EA+ I +P +PD IWG+LL
Sbjct: 503 LNQGWELFDAMSDVFAIQPQLEHYVCMVNLLGRAGKVEEAEEFISKLPFEPDLTIWGALL 562
Query: 568 AACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
C N + AK+LLE++P N+ +V+L N++A +G+ E ++RK M +GV
Sbjct: 563 GVCGFGMINTGVARRAAKRLLELDPLNAPAHVVLCNIHASIGQRAEEGQLRKEMGLKGVR 622
Query: 627 KQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
K PGCSWI + G VF+ D+ HP E+ +L
Sbjct: 623 KVPGCSWILLKGEPYVFLSGDRIHPQADEMLSLL 656
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+S F+ LL + + R+ H ++K+QF ++ +QN LI +YAKCG + A +F
Sbjct: 386 NSTFSILLGAAGAMAYLDQGRQFHCLLMKTQFEFDLILQNSLISMYAKCGEIGDAYSIFS 445
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
KM ++++ +WNS+I G G +A ++F +M
Sbjct: 446 KMISRDLISWNSMIMGFSHHGLTSEALKVFEAM 478
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 344/647 (53%), Gaps = 79/647 (12%)
Query: 31 RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
+ ++ ++HA+++K+ ++F+ +LI ++ C L A VF+ + + NV +NS
Sbjct: 30 KCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNS 89
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
II R A +N+ F +M
Sbjct: 90 II-------------RAHAHNTSHPSLPFNA-----------------FFQMQKNGLFPD 119
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--VSCARRV 208
+++ L AC G + +HA + K + D+++ ++LID Y +CG + A +
Sbjct: 120 NFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSL 179
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M+ER++V+WNS+I + G A ++F M P+
Sbjct: 180 FLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEM------PER---------------- 217
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
D+V N ++D YAK G+++ A +F+RMP RN+VS ++MV G
Sbjct: 218 ------------------DMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCG 259
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y+K + AR++F + +NVV W +IAGY + G EA L+ ++ + P
Sbjct: 260 YSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFL 319
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L ACA L LG++ H + + RF G + V N+ IDMY KCG ++ +
Sbjct: 320 ISILAACAESGMLGLGKRIHASMRR--WRFRCGTK----VLNAFIDMYAKCGCLDAAFDV 373
Query: 449 FETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
F M+ ++D VSWN+MI G A +G+G +AL LF +M+ G +PD T +G+LCAC+HAGL
Sbjct: 374 FSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGL 433
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V EGRKYF SM K +G+ P +HY CM+DLLGR G L EA TL+ +MPM+P+A+I G+LL
Sbjct: 434 VNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLL 493
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC++H ++ V ++L ++EP++ G Y LLSN+YA+ G W V VR M G K
Sbjct: 494 NACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQK 553
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
G S IE+ V+ F V D+ HP + +IY ++ L +++++VGYVP
Sbjct: 554 PSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLRQVGYVP 600
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 181/394 (45%), Gaps = 74/394 (18%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC--LYGA 73
F D+ + LL +C S+ R +HA + K F +IF+ N LID Y++CG L GA
Sbjct: 117 FPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGA 176
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+F M ++V TWNS+I GL++ G ++ A +LF MPERD SWN+M+ G+A+
Sbjct: 177 MSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMD 236
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A F +M N + S ++
Sbjct: 237 RAFELFERMPQRN---------------------------------------IVSWSTMV 257
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G + AR +FD +N+V W ++I Y + G +A E++ +M +G+ PD+
Sbjct: 258 CGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDG 317
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD- 312
L S+++ACA G +IHA MR + R + NA +DMYAKCG L+ A VF
Sbjct: 318 FLISILAACAESGMLGLGKRIHAS-MRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSG 376
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M ++VVS SM+ G+A +G E+AL L
Sbjct: 377 MMAKKDVVSWNSMIQGFA-------------------------------MHGHGEKALEL 405
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
F + E P YTF LL AC + + GR+
Sbjct: 406 FSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRK 439
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 323/570 (56%), Gaps = 41/570 (7%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN+ + A+ F EAL + +M + + + ++F A +CA G+Q+H +
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD-GMRERNI-VSWNSLITCYEQNGPASD 235
K+ + ++ ++LI MY KC ++ AR+VFD RN+ V +N+LI Y N SD
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
A+ +F +M G+ + VT+ ++ CA G +HA +R L DL +GN L+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRF-GLDGDLSVGNCLL 201
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
MY +CG SV AR +F M E+ +++WNA
Sbjct: 202 TMYVRCG-------------------------------SVDFARKLFDGMPEKGLITWNA 230
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
+I+GY QNG L L+R ++ + P T +L++CA+L GR+ + G
Sbjct: 231 MISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSG 290
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
F + F+ N+LI+MY +CG++ IF+ M E++ +SW A+I G +G G
Sbjct: 291 FGF------NPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGEL 344
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
A+ LF +M+ E PD + VL ACSHAGL E+G YF++M +++GL P +HY+C+V
Sbjct: 345 AVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVV 404
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
DLLGRAG L+EA+ LI +M ++PD +WG+LL ACK+HRN+ L E +K++E EP+N G
Sbjct: 405 DLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIG 464
Query: 596 PYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKE 655
YVLLSN+++E G ++RVR +MR+R + K+PGCS++E G +++F+ D+ HP +E
Sbjct: 465 YYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQE 524
Query: 656 IYLVLKMLTREMKRVGYVPNASDDEAYEEQ 685
IY +L L +KR G N +D E+ E+
Sbjct: 525 IYHMLDGLEDIIKRRG-GSNDNDQESRNEE 553
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 219/463 (47%), Gaps = 81/463 (17%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
GD + PFA SC ++H +IK+ E F+Q LI +Y KC +
Sbjct: 51 GDSPNAFTFPFA--FKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIA 108
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
ARKVFD+ + SR A +N++++G++ + R
Sbjct: 109 SARKVFDE----------------------NHHSRNLA-------VCYNALIAGYSLNSR 139
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
FS+A+ F +M E +++ + + CAG + GT +HA + D+ +G+
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+ MY +CG V AR++FDGM E+ +++WN++I+ Y QNG A L+++ +M +GI PD
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPD 259
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VTL V+S+CA L A G ++ R+ + L NAL++MYA+CG L +AR +F
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRI-ELSGFGFNPFLKNALINMYARCGNLVKARAIF 318
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D M +NV+S T+++ AGY +G+ E A+
Sbjct: 319 DGMTEKNVISWTAII-------------------------------AGYGMHGQGELAVQ 347
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG-- 429
LF + P F ++L+AC +H + + GL + + E D +
Sbjct: 348 LFDEMISSDELPDGAAFVSVLSAC-----------SHAGLTEKGLYYFTAMERDYGLQPG 396
Query: 430 ----NSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+ ++D+ + G +E+ ++ +M VE D W A++ C
Sbjct: 397 PEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 188/390 (48%), Gaps = 55/390 (14%)
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+ SWN+ + + +AL ++ +M+ASG P+ T +CASL+ G Q
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 274 IHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR-MPIRNV-VSETSMVSGY 329
+H +++ CE + + +L+ MY KC + AR VFD RN+ V ++++GY
Sbjct: 78 LHGHVIKTGCEP---EPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGY 134
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC--PTHYT 387
+ S A L+F +M + VS NA+ LGL VC P H
Sbjct: 135 SLNSRFSDAVLLFRQM-RKEGVSVNAVT-----------MLGLI------PVCAGPIHLG 176
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
FG L+AC+ +RF G + D+ VGN L+ MY++CGSV+ +
Sbjct: 177 FGTSLHACS-------------------VRF--GLDGDLSVGNCLLTMYVRCGSVDFARK 215
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M E+ ++WNAMI G AQNG L L++KM G PD VT++GVL +C+H G
Sbjct: 216 LFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGA 275
Query: 508 VEEGRKYFSSMS-KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
GR+ + G P + ++++ R G L +A+ + + M + + + W ++
Sbjct: 276 HAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIFDGM-TEKNVISWTAI 332
Query: 567 LAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
+A +H GE + E+ S+ P
Sbjct: 333 IAGYGMHGQ---GELAVQLFDEMISSDELP 359
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 146/335 (43%), Gaps = 61/335 (18%)
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
L+ SWNA + + +EAL L+ + P +TF +CA+L+ G
Sbjct: 17 LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGS 76
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDW-VSWNAM 463
Q H HV+K +G E + FV SLI MY KC ++ ++F E R+ V +NA+
Sbjct: 77 QLHGHVIK------TGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNAL 130
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG-RKYFSSMSKEH 522
I G + N ++A+ LF++M G + VTM+G++ C AG + G + S
Sbjct: 131 IAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRF 188
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP--------------------------- 555
GL C++ + R G +D A+ L + MP
Sbjct: 189 GLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLY 248
Query: 556 -------MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSG--PYV--LLSN 602
+ PD V +L++C LG + A + +E IE S G P++ L N
Sbjct: 249 RKMEFTGIVPDPVTLVGVLSSCA-----HLGAHAAGREVEQRIELSGFGFNPFLKNALIN 303
Query: 603 MYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
MYA R G +V+ R + G+ ++ SW I+
Sbjct: 304 MYA---RCGNLVKARAIF--DGMTEKNVISWTAII 333
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/524 (39%), Positives = 306/524 (58%), Gaps = 11/524 (2%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L CA + +HA + K + + L+++YGKCG S A +VFD M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHA 276
++W S++T Q + L VF + +S + PD+ +++V ACA+L + G Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ E ND V+ ++LVDMYAKCG LN A+ VFD + ++N +S T+MVSGYAK+ +
Sbjct: 130 HFIVSE-YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNLLNAC 395
A +F + +N+ SW ALI+G+ Q+G+ EA +F ++RE V +++ AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
ANLA GRQ H GL G +S +F+ N+LIDMY KC V IF M R
Sbjct: 249 ANLAASIAGRQVH------GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW ++IVG AQ+G +AL L+ M+ G KP+ VT +G++ ACSH G VE+GR+ F
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
SM+K++G+ P HYTC++DLLGR+G LDEA+ LI MP PD W +LL+ACK
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 576 IMLGEYVAKKLL-EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
+G +A L+ + + Y+LLSN+YA WG+V R+ + + V K PG S +
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNAS 677
E+ VF + HPL ++I+ +LK L EM+ R GYVP+ S
Sbjct: 483 EVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ L+ +C S+ R+VH I S++A++ +++ L+D+YAKCG L A+ VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + KN +W ++++G K G ++A LF +P ++ SW +++SGF Q + EA
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 138 YFVKMHSENF-ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E L S + ACA G QVH L+ + S V++ +ALIDMY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC V A+ +F MR R++VSW SLI Q+G A AL ++ M++ G++P+EVT
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++ AC+ + ++G ++ + + +R L L+D+ + G L+EA + MP
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 240/532 (45%), Gaps = 109/532 (20%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C R+++++ + +HA I+K + N L++VY KCG A +VFD+M +++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
W S++T L + + +SG S ++
Sbjct: 70 IAWASVLTALNQ-----------------------ANLSGKTLSVFSSVGSSSGLRP--- 103
Query: 146 NFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
++ F + + ACA GS+D G QVH S Y++D + S+L+DMY KCG ++
Sbjct: 104 ----DDFVFSALVKACANLGSIDH--GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF----VRMMAS------------- 246
A+ VFD +R +N +SW ++++ Y ++G +ALE+F V+ + S
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 247 GIEP---------------DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
G+E D + L+S+V ACA+LAA G Q+H L+ + + +
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG-LVIALGFDSCVFIS 276
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NAL+DMYAKC + A+ +F RM R+VVS TS++ G A
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA--------------------- 315
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
Q+G+ E+AL L+ + V P TF L+ AC+++ ++ GR+ +
Sbjct: 316 ----------QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 412 VK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQ 469
K +G+R + L+D+ + G +++ + TM D +W A++ C +
Sbjct: 366 TKDYGIR------PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMI---GVLCACSHAGLVEEGRKYFSSM 518
G G + + ++ + D T I + + S G V E R+ M
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
LD + ++ +C + R+VH +I F S +FI N LID+YAKC + A+
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+F +M +++V +W S+I G+ AQH + +A
Sbjct: 295 IFSRMRHRDVVSWTSLIVGM-------------------------------AQHGQAEKA 323
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSAL 192
L + M S +E +F + AC+ + G ++ ++K R S Y + L
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY--TCL 381
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D+ G+ G + D E + M PDE
Sbjct: 382 LDLLGRSGLL--------------------------------DEAENLIHTMP--FPPDE 407
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC---GKLNEARC 309
T A+++SAC + G++I L+ KL+ D L ++YA GK++EAR
Sbjct: 408 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLK-DPSTYILLSNIYASASLWGKVSEARR 466
Query: 310 VFDRMPIRNVVSETSM 325
M +R +S+
Sbjct: 467 KLGEMEVRKDPGHSSV 482
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 327/589 (55%), Gaps = 42/589 (7%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I + G +++A LF MP+RD +W +M++G+A + + A F +M + +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-RVSCARR 207
+E++ S L +C G VH ++ K +Y+ +A+++MY C + A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F ++ +N V+W +LIT + G L+++ +M+ E + V A AS+ +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G QIHA +++ +++L + N+++D+Y +CG L+EA+ F M
Sbjct: 229 VTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME------------ 275
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
++++++WN LI+ + ++ EAL +F+ + + P YT
Sbjct: 276 -------------------DKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYT 315
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +L+ ACAN+A L G+Q H + + G ++ + N+LIDMY KCG++ D R
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGF------NKNVELANALIDMYAKCGNIPDSQR 369
Query: 448 IFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F +V+R + VSW +M++G +GYG EA+ LF KM+ G +PD + + VL AC HAG
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAG 429
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVE+G KYF+ M E+G+ P +D Y C+VDLLGRAG + EA L+E MP +PD WG++
Sbjct: 430 LVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Query: 567 LAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
L ACK H+ N ++ A+K++E++P G YV+LS +YA G+W + RVRK+MR G
Sbjct: 490 LGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGN 549
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
K+ G SWI + V F V DK P +Y VL +L E + GYVP
Sbjct: 550 KKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVP 598
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 33/300 (11%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
SV+ +++HA +IK F S + + N ++D+Y +CG
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG------------------------- 262
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
++ +A F M ++D +WN+++S + D SEAL F + S+ F + Y+
Sbjct: 263 ------YLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYT 315
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F S ++ACA G Q+H + + ++ +V + +ALIDMY KCG + ++RVF +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 214 E-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ RN+VSW S++ Y +G ++A+E+F +M++SGI PD + +V+SAC ++GL
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+ + + D + N +VD+ + GK+ EA + +RMP + S + G KA
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 90/458 (19%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG-CLYGARKVFDKM 80
+ +L SC K ++ VH ++K +++ N ++++YA C + A +F +
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
KN TW ++ITG G G L +
Sbjct: 174 KVKNDVTWTTLITGFTHLG------------------------DGIG-------GLKMYK 202
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M EN ++ Y A+ A A G Q+HA + K + S++ + ++++D+Y +CG
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+S A+ F M ++++++WN+LI+ E++ +S+AL +F R + G P+ T S+V+
Sbjct: 263 YLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF----DRMPI 316
ACA++AA G Q+H R+ R ++ L NAL+DMYAKCG + +++ VF DR
Sbjct: 322 ACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR--- 377
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN+VS TSM+ GY +G EA+ LF +
Sbjct: 378 RNLVSWTSMMIGYG-------------------------------SHGYGAEAVELFDKM 406
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------N 430
+ P F +L+AC H +V+ GL++ + ES+ + N
Sbjct: 407 VSSGIRPDRIVFMAVLSAC-----------RHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G + + + E M + D +W A++ C
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 184/387 (47%), Gaps = 41/387 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ + LI Y + G V AR +FD M +R++V+W ++IT Y + + A E F M+ G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
P+E TL+SV+ +C ++ G +H +++ + L + NA+++MYA C EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL-GMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 308 RC-VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
C +F + ++N V+ T+ LI G+T G+
Sbjct: 166 ACLIFRDIKVKNDVTWTT-------------------------------LITGFTHLGDG 194
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L +++ + E+ T Y + A A++ + G+Q H V+K G +S++
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF------QSNL 248
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V NS++D+Y +CG + + F M ++D ++WN +I ++ +EAL +F++
Sbjct: 249 PVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQ 307
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G P+ T ++ AC++ + G++ + + G + ++D+ + G + +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPD 366
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + + + + V W S++ H
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ++ + T+++ Y + V+ AR +F +M +R+VV+W A+I GY + N A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ ++ P +T ++L +C N+ L G H VVK G+ E ++V N++++
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGM------EGSLYVDNAMMN 154
Query: 435 MYMKCG-SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY C ++E C IF + ++ V+W +I G G G L ++K+MLL +
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ + A + V G++ +S+ K G ++DL R G L EAK
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 554 MPMQPDAVIWGSLLA 568
M D + W +L++
Sbjct: 274 ME-DKDLITWNTLIS 287
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 316/522 (60%), Gaps = 15/522 (2%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F L C V+ K ++HA + K S ++ + ++D+ A +F +
Sbjct: 17 FVPILKNCPNIVELK---KIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVA 73
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMA-----SGIEPDEVTLASVVSACASLAAF 268
+ N +N++I Y+ N A+ V+ +M+ + I PD+ T VV +CA L +
Sbjct: 74 DPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCY 133
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
G Q+H + + + +++ V+ N+LV+MY KC L++A VF+ M R+ VS +++SG
Sbjct: 134 DLGKQVHGHVFKFGQ-KSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISG 192
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+ + ++ AR +F +M ++ + SW A+++GY + G +AL FR ++ + P +
Sbjct: 193 HVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISL 252
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L ACA L L+LG+ H + K G FL +I V N+LI+MY KCGS+++G R+
Sbjct: 253 VSVLPACAQLGALELGKWIHFYADKAG--FLR----NICVCNALIEMYAKCGSIDEGRRL 306
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ M ERD +SW+ MIVG A +G EA+ LF++M +P+ +T +G+L AC+HAGL+
Sbjct: 307 FDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLL 366
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG +YF SM +++ + P +HY C+V+LLG +G LD+A LI+ MPM+PD+ IWGSLL+
Sbjct: 367 NEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLS 426
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
+C+ H N+ + + LLE+EP+++G YVLLSN+YA+LG+W V R+RKLMR + + K
Sbjct: 427 SCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKT 486
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
PGCS IE+ V F D P +K IY VLK+L +R+
Sbjct: 487 PGCSSIEVDNMVQEFASGDDSKPFSKAIYRVLKLLVMHQRRM 528
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 171/315 (54%), Gaps = 5/315 (1%)
Query: 8 KQIVG-----DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLID 62
KQ++G + F D F ++ SC ++VH + K S ++N L++
Sbjct: 101 KQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVE 160
Query: 63 VYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSM 122
+Y KC L A KVF++M+ ++ +WN++I+G ++ G + A +F M ++ SW ++
Sbjct: 161 MYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAI 220
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
VSG+A+ +++AL +F +M E S S L ACA ++G +H K+ +
Sbjct: 221 VSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGF 280
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVR 242
++ + +ALI+MY KCG + RR+FD M ER+++SW+++I +G A +A+E+F
Sbjct: 281 LRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQE 340
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
M + IEP+ +T ++SACA EGL+ + R + + LV++ G
Sbjct: 341 MQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSG 400
Query: 303 KLNEARCVFDRMPIR 317
+L++A + +MP++
Sbjct: 401 RLDQALELIKKMPMK 415
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/625 (35%), Positives = 334/625 (53%), Gaps = 92/625 (14%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG--FIDDASRLF 108
A + N+ I A+ G + AR+VFD M++++V +WN+++T L + G + A RLF
Sbjct: 12 ARRLLRDNQRISALARAGDVAAARRVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLF 71
Query: 109 -ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDF 167
+MP RD SWNS+++G H A YF AG+ +
Sbjct: 72 DEAMPSRDVVSWNSIIAGCLAHGDLDAASAYF----------------------AGAPER 109
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
+ T +A++ + GRV A+R+FD M ERN+VS+ +++
Sbjct: 110 NVATW-----------------NAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWL 152
Query: 228 EQNGPASDALEVFVRMMASGIEPDE--VTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ G A EVF M PD V+ A+++S C
Sbjct: 153 ARRGEVERAREVFDSM------PDRNLVSWAAMISGCV---------------------- 184
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ G EAR +F+ MP +NVV+ T+M++G+ K V SAR +F +
Sbjct: 185 --------------ENGMFVEARELFEAMPEKNVVACTAMITGHCKQGDVDSARRLFDGI 230
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
++V+SWNA+IAGY NG EEA+ L L+ RE V P H T +L AC+ LA L+ G+
Sbjct: 231 RAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALALLRQGK 290
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
H +K L ES I N+L+ MY KCG+V + +F + +D VSWN +I
Sbjct: 291 STHAIAIKAML------ESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
AQ+G + + LF +M + G PD +T + VL AC H G+V+ K F MS ++ ++
Sbjct: 345 AYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKLFDLMSSKYAIS 404
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY C+VD+L RAG L++A + I+ MP++ + +WGSLL AC++H N+ LGE AK
Sbjct: 405 PRAEHYACIVDILSRAGQLEKASSYIKHMPLKAEKNVWGSLLGACQIHGNVQLGELAAKM 464
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
L++ + +SGPYV+LSN+YA G WG+V ++R M++RGV KQPG SW EI V++F+
Sbjct: 465 LVQSDSQSSGPYVILSNIYAAAGMWGQVNQIRGQMKERGVKKQPGYSWTEIGNEVHMFVG 524
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRV 670
D HP ++I L+ ++ M+ V
Sbjct: 525 GDASHPEMRKIISELRKISFHMRMV 549
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 194/400 (48%), Gaps = 64/400 (16%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG--CLYGARKVFDK-MSN 82
+ + R+ V+ RRV + ++ N L+ + G L AR++FD+ M +
Sbjct: 22 ISALARAGDVAAARRV----FDAMTHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPS 77
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V +WNSII G L G +D AS FA PER+ +WN+M++G + R +A F +M
Sbjct: 78 RDVVSWNSIIAGCLAHGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDEM 137
Query: 143 HSENF------------------------ALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
N ++ + + S + +G V+ M + L
Sbjct: 138 PERNVVSYTTMVDWLARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELF- 196
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
++ +V +A+I + K G V ARR+FDG+R ++++SWN++I Y NG +A+
Sbjct: 197 EAMPEKNVVACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMR 256
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+ M G++PD TL +V++AC++LA ++G HA ++ L + + NAL+ MY
Sbjct: 257 LHALMFREGVKPDHATLIAVLTACSALALLRQGKSTHAIAIKA-MLESGISFSNALMTMY 315
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+KCG + E+ VF + +++VS WN +IA
Sbjct: 316 SKCGNVGESELVFINLRTKDIVS-------------------------------WNTIIA 344
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
Y Q+G+ ++ + LF ++ + P TF ++L+AC ++
Sbjct: 345 AYAQHGKYQKVIALFHEMEVTGLIPDDITFLSVLSACGHV 384
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 39/219 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C + + HA IK+ S I N L+ +Y+KCG + + VF
Sbjct: 269 DHATLIAVLTACSALALLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVF 328
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K++ +WN+II + +AQH ++ + +
Sbjct: 329 INLRTKDIVSWNTII-------------------------------AAYAQHGKYQKVIA 357
Query: 138 YFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F +M + +F S LSAC G VD + + SK S + ++D+
Sbjct: 358 LFHEMEVTGLIPDDITFLSVLSACGHVGMVDASLKL-FDLMSSKYAISPRAEHYACIVDI 416
Query: 196 YGKCGRVSCARRVFDGM---RERNIVSWNSLITCYEQNG 231
+ G++ A M E+N+ W SL+ + +G
Sbjct: 417 LSRAGQLEKASSYIKHMPLKAEKNV--WGSLLGACQIHG 453
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/640 (36%), Positives = 333/640 (52%), Gaps = 72/640 (11%)
Query: 31 RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
R+KS+ ++HA I++ S + N L C L + K
Sbjct: 26 RTKSIPTLLQIHAFILRHSLHSNL---NLLTAFVTTCASLAASAK--------------- 67
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF--VKMHSENFA 148
I+ A R F + RD NSM++ +FS+ F ++ + F
Sbjct: 68 -----RPLAIINHARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFT 122
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
Y+F + + CA V GT +H ++ K+ D+Y+ +AL+DMY K G + AR+V
Sbjct: 123 PDGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKV 182
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
FD M R+ VSW ++I Y + G S+A +F DE+
Sbjct: 183 FDEMSVRSKVSWTAVIVGYARCGDMSEARRLF----------DEME-------------- 218
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
D+V NA++D Y K G + AR +F+ M RNVVS TSMVSG
Sbjct: 219 ----------------DRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSG 262
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
Y V++A+LMF M E+NV +WNA+I GY QN + +AL LFR ++ SV P T
Sbjct: 263 YCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTV 322
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+L A A+L L LGR H ++ L + +G +LIDMY KCG +
Sbjct: 323 VCVLPAVADLGALDLGRWIHRFALRKKL------DRSARIGTALIDMYAKCGEITKAKLA 376
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
FE M ER+ SWNA+I G A NG EAL +F +M+ G P+ VTMIGVL AC+H GLV
Sbjct: 377 FEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLV 436
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EEGR++F++M + G+AP +HY CMVDLLGRAGCLDEA+ LI+ MP + +I S L
Sbjct: 437 EEGRRWFNAMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLF 495
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC +++ E V K++++++ +G YV+L N+YA RW +V V+++M+KRG K+
Sbjct: 496 ACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKE 555
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
CS IEI G F D H + I L L L++ MK
Sbjct: 556 VACSVIEIGGSFIEFAAGDYLHSHLEVIQLTLGQLSKHMK 595
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 44/380 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F L+ C + + +H ++K+ ++++ L+D+Y K G L ARKVF
Sbjct: 124 DGYTFTALVKGCATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVF 183
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+MS ++ +W ++I G + G + +A RLF M +RD ++N+M+ G+ + A
Sbjct: 184 DEMSVRSKVSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARE 243
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N V ++++ Y
Sbjct: 244 LFNEMRERN---------------------------------------VVSWTSMVSGYC 264
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
G V A+ +FD M E+N+ +WN++I Y QN + DALE+F M + +EP+EVT+
Sbjct: 265 GNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVC 324
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ A A L A G IH +R +KL +G AL+DMYAKCG++ +A+ F+ M R
Sbjct: 325 VLPAVADLGALDLGRWIHRFALR-KKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTER 383
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLF 373
S ++++G+A K A +F +M+E N V+ +++ G EE F
Sbjct: 384 ETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWF 443
Query: 374 RLLKRESVCPTHYTFGNLLN 393
++R + P +G +++
Sbjct: 444 NAMERFGIAPQVEHYGCMVD 463
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 163/310 (52%), Gaps = 5/310 (1%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S +++ +++ + ++ R +S+ RR + +I N +ID Y
Sbjct: 178 SARKVFDEMSVRSKVSWTAVIVGYARCGDMSEARR----LFDEMEDRDIVAFNAMIDGYV 233
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
K GC+ AR++F++M +NV +W S+++G G +++A +F MPE++ +WN+M+ G
Sbjct: 234 KMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGG 293
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+ Q+ R +AL F +M + + +E + L A A +G +H + +
Sbjct: 294 YCQNRRSHDALELFREMQTASVEPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRS 353
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+G+ALIDMY KCG ++ A+ F+GM ER SWN+LI + NG A +ALEVF RM+
Sbjct: 354 ARIGTALIDMYAKCGEITKAKLAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIE 413
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G P+EVT+ V+SAC +EG + + R + + +VD+ + G L+
Sbjct: 414 EGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAMERF-GIAPQVEHYGCMVDLLGRAGCLD 472
Query: 306 EARCVFDRMP 315
EA + MP
Sbjct: 473 EAENLIQTMP 482
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 320/573 (55%), Gaps = 55/573 (9%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
+W+S++ + H + F M S + + + F S L A K+ +HA
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 178 SKSRYSSDVYMGSALIDMYGK---CGRV------------SCARRVFDGMRERNIVSWNS 222
+ SD+Y+ +ALI+ Y K G+V C ++VFD M R++VSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 223 LITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+I + QNG +AL++ M +G ++PD TL+S++ A +G +IH +R
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR- 255
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
D+ +G++L+DMYAKC +L + F +P
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-------------------------- 289
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
++ +SWN++IAG QNGE + LG FR + +E+V P +F +++ ACA+L L
Sbjct: 290 -----RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTAL 344
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
LGRQ H +V+ G + + F+ +SL+DMY KCG+++ +F+ + +RD V+W
Sbjct: 345 SLGRQLHGCIVRLGF------DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWT 398
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
A+I+GCA +G+ +A+ LF+ ML G +P +V + VL ACSHAGLV+EG +YF+SM ++
Sbjct: 399 AIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERD 458
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGE 580
G+AP +HY + DLLGRAG L+EA I M +QP +W LLAAC+ H+++ L E
Sbjct: 459 FGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAE 518
Query: 581 YVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHV 640
V KLL ++ N G YVL+SN+Y+ RW + R+R MRK+G+ K P CSWIE+ V
Sbjct: 519 KVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQV 578
Query: 641 NVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
+ FM DK HP +I L +L +M++ GYV
Sbjct: 579 HTFMAGDKSHPYYDKINKALDVLLEQMEKEGYV 611
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 201/393 (51%), Gaps = 37/393 (9%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + K +HA ++ S+++I N LI+ YAK + A KVFD
Sbjct: 113 FPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAK---FHNAGKVFDVFP 169
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ +G ID ++F MP RD SWN++++GFAQ+ + EAL +
Sbjct: 170 KRGE-------SG------IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVRE 216
Query: 142 MHSENFALSEYSF--GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M +N L SF S L A VD G ++H ++ + DV++GS+LIDMY KC
Sbjct: 217 M-GKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKC 275
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
R+ C+ R F + ++ +SWNS+I QNG L F RM+ ++P V+ +SV+
Sbjct: 276 NRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVI 335
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
ACA L A G Q+H ++R N+ + ++LVDMYAKCG + AR VFDR+ R++
Sbjct: 336 PACAHLTALSLGRQLHGCIVRLGFDDNEFI-ASSLVDMYAKCGNIKMARYVFDRIDKRDM 394
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRL 375
V+ T+++ G A A +F MLE V V++ A++ + G +E F
Sbjct: 395 VAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNS 454
Query: 376 LKRE-SVCP--THYTFGNLLNACANLADLQLGR 405
++R+ + P HY A +ADL LGR
Sbjct: 455 MERDFGIAPGLEHY---------AAVADL-LGR 477
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 31/290 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS + +L V+ + +H +++ F ++FI + LID+YAKC L
Sbjct: 226 DSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRL------- 278
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + R F +P +D SWNS+++G Q+ F LG
Sbjct: 279 ------------------------ECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLG 314
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F +M EN SF S + ACA +G Q+H + + + + ++ S+L+DMY
Sbjct: 315 FFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYA 374
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + AR VFD + +R++V+W ++I +G A DA+ +F M+ G+ P V +
Sbjct: 375 KCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMA 434
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
V++AC+ EG + + R + L A+ D+ + G+L EA
Sbjct: 435 VLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEA 484
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/645 (33%), Positives = 352/645 (54%), Gaps = 70/645 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C +++ ++H +IK F ++F+ LI +Y++CG L A KV+ ++ K+
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +C N M+S + + +A+G F+ +
Sbjct: 245 V------------------------------RC-LNFMISEYGKAGCGEKAIGVFLHLLG 273
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
++Y+F + +SAC G +D ++ +H + K ++ +G+A++ +Y K G +
Sbjct: 274 SGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEE 333
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A + F GM ERN+VSW +L++ Y +NG ALE F +++ G+ D A+++ C+
Sbjct: 334 AEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSE 393
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
GLQIH +++ + +D+ +G AL+D+YAKC K
Sbjct: 394 CKNLGLGLQIHGFVVKLGYV-HDVSVGTALIDLYAKCRK--------------------- 431
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
++SARL+F +L++N+VS+NA+++GY + E+A+ LF L+ + P
Sbjct: 432 ----------LRSARLVFHSLLDKNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPD 480
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
TF LL+ A+ A L G+ H +++K G E++ VGN++I MY KCGS+ D
Sbjct: 481 SVTFARLLSLSADQACLVKGKCLHAYIIKTGF------EANPSVGNAVITMYAKCGSIGD 534
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
C++F +M D +SWNA+I A +G G +AL LF++M PD +T++ VL ACS+
Sbjct: 535 ACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSY 594
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
+GL+EEG F+ M ++G+ P +H+ CMVDLLGRAG L EA + I P ++W
Sbjct: 595 SGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWR 654
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+L+ CK+H ++ G+ +K LL++ P +G Y+L+SN+YA G E RVR +M
Sbjct: 655 TLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLK 714
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
V K+ G SWIEI V+ F+ DK HP +KEIY L +L EMK+
Sbjct: 715 VSKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMKQ 759
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/560 (25%), Positives = 258/560 (46%), Gaps = 76/560 (13%)
Query: 18 DSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
D +P + +LL + S + + +HA + K + ++ F N L+++Y K
Sbjct: 73 DQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGK------- 125
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
F+K+ DA +F M R+ +W +++ G Q +
Sbjct: 126 ---FNKLG---------------------DAQSVFDEMLVRNTITWTTLIKGHLQVNDVE 161
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+M+ +E++ L AC + G Q+H + K + DV++G++LI
Sbjct: 162 SVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLI 221
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY +CG + A +V+ + +++ N +I+ Y + G A+ VF+ ++ SG+EP++
Sbjct: 222 SMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDY 281
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T +V+SAC + +H ++C +++ +GNA+V +Y K G L EA F
Sbjct: 282 TFTNVISACNGDIDVEVLRVLHGMCIKC-GCGDEISVGNAIVSVYVKHGMLEEAEKSFCG 340
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
M RN+VS T+++SGY K + K A F+++LE V G+
Sbjct: 341 MGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGV--------GF------------- 379
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+S C F LL+ C+ +L LG Q H VVK G D+ VG +LI
Sbjct: 380 -----DSCC-----FATLLDGCSECKNLGLGLQIHGFVVKLGYV------HDVSVGTALI 423
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
D+Y KC + +F ++++++ VS+NA++ G +A+ LF ++ L KPD V
Sbjct: 424 DLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPDSV 482
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T +L + + +G+ + + K G ++ + + G + +A L +
Sbjct: 483 TFARLLSLSADQACLVKGKCLHAYIIKT-GFEANPSVGNAVITMYAKCGSIGDACQLFYS 541
Query: 554 MPMQPDAVIWGSLLAACKVH 573
M D++ W ++++A +H
Sbjct: 542 MNYL-DSISWNAVISAYALH 560
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 219/500 (43%), Gaps = 87/500 (17%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L GS D +G +HA L+K Y +D + G+ L+++YGK ++ A+ VFD M RN
Sbjct: 85 LQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNT 144
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
++W +LI + Q + M G E +E T + ++ AC SL G QIH
Sbjct: 145 ITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGF 204
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
+++ D+ +G +L+ MY++CG L A V+ + ++V M+S Y KA
Sbjct: 205 VIK-RGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKA----- 258
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
G E+A+G+F L + P YTF N+++AC
Sbjct: 259 --------------------------GCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNG 292
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDW 457
D+++ R V HG+ G +I VGN+++ +Y+K G +E+ + F M ER+
Sbjct: 293 DIDVEVLR------VLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNL 346
Query: 458 VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS---HAGLVEEGRKY 514
VSW A++ G +NG G +AL F ++L G D +L CS + GL + +
Sbjct: 347 VSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGF 406
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM-------------------- 554
+ H ++ T ++DL + L A+ + ++
Sbjct: 407 VVKLGYVHDVSV----GTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADE 462
Query: 555 -------------PMQPDAVIWGSLLA-----ACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
++PD+V + LL+ AC V + L Y+ K E PS
Sbjct: 463 EDAMALFSQLRLADIKPDSVTFARLLSLSADQACLV-KGKCLHAYIIKTGFEANPSVGNA 521
Query: 597 YVLLSNMYAELGRWGEVVRV 616
+ MYA+ G G+ ++
Sbjct: 522 VI---TMYAKCGSIGDACQL 538
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 37/357 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F ++ +C V R +H IK EI + N ++ VY K G L A K F M
Sbjct: 283 FTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMG 342
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+N+ +W ++++G +K G +G + FS+ L V
Sbjct: 343 ERNLVSWTALLSGYVKNG------------------------NGKKALEGFSQILELGVG 378
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
S FA + L C+ + +G Q+H + K Y DV +G+ALID+Y KC +
Sbjct: 379 FDSCCFA-------TLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRK 431
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR VF + ++NIVS+N++++ Y DA+ +F ++ + I+PD VT A ++S
Sbjct: 432 LRSARLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSL 490
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A A +G +HA +++ N V GNA++ MYAKCG + +A +F M + +S
Sbjct: 491 SADQACLVKGKCLHAYIIKTGFEANPSV-GNAVITMYAKCGSIGDACQLFYSMNYLDSIS 549
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ----NGENEEALGLFR 374
+++S YA + A ++F +M + V I Q +G EE LF
Sbjct: 550 WNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFN 606
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 32/300 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS FA LLD C K++ ++H ++K + ++ + LID+YAKC L AR V
Sbjct: 379 FDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLV 438
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F + +KN+ ++N+I++G + E D A+
Sbjct: 439 FHSLLDKNIVSFNAILSG-------------YIGADEED-------------------AM 466
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F ++ + +F LS A G +HA + K+ + ++ +G+A+I MY
Sbjct: 467 ALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMY 526
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A ++F M + +SWN++I+ Y +G AL +F M PDE+T+
Sbjct: 527 AKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITIL 586
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ AC+ +EG + + ++ ++ +VD+ + G L+EA +R P
Sbjct: 587 SVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPF 646
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 329/586 (56%), Gaps = 12/586 (2%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS-ENF 147
N++I+ LK G + +A LF +M RD +WN+ ++G+ + + +AL F + S E
Sbjct: 291 NALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETL 350
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCAR 206
+ S L ACA + K+G Q+HA + + + D +G+AL+ Y KCG A
Sbjct: 351 LPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAY 410
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
F + ++++SWNS+ + + S L + M+ I PD VT+ +++ CASL
Sbjct: 411 HTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLL 470
Query: 267 AFKEGLQIHARLMRCEKLRNDL--VLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSET 323
++ +IH+ +R L ++ +GNA++D Y+KCG + A +F + RN+V+
Sbjct: 471 RVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCN 530
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S++SGY S A ++F+ M E ++ +WN ++ Y +N E+ALGL L+ + P
Sbjct: 531 SLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKP 590
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T +LL C +A + L Q ++++ + D+ + +L+D Y KCG +
Sbjct: 591 DTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFK-------DLHLEAALLDAYAKCGIIG 643
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+IF+ E+D V + AMI G A +G EAL +F ML G +PDH+ +L ACS
Sbjct: 644 RAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACS 703
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAG V+EG K F S+ K HG+ P + Y C+VDLL R G + EA +L+ ++P++ +A +W
Sbjct: 704 HAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLW 763
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
G+LL ACK H + LG VA +L +IE ++ G Y++LSN+YA RW V+ VR++MR +
Sbjct: 764 GTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRNK 823
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
+ K GCSWIE+ N+F+ D HP IY L+ L R++K
Sbjct: 824 DLKKPAGCSWIEVERTNNIFVAGDCSHPQRSIIYSTLQTLDRQVKE 869
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 262/562 (46%), Gaps = 80/562 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC + + R +H ++K S L+++YAKCG L K+F
Sbjct: 42 DHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLF 101
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF-SEAL 136
D++S+ D WN ++SGF+ ++ ++ +
Sbjct: 102 DQLSHC-------------------------------DPVVWNIVLSGFSGSNKCDADVM 130
Query: 137 GYFVKMHSENFAL-SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F MHS AL + + + L CA D G VH + KS + D G+AL+ M
Sbjct: 131 RVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSM 190
Query: 196 YGKCGRVSC-ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y KCG VS A VFD + +++VSWN++I +N DA +F M+ P+ T
Sbjct: 191 YAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYAT 250
Query: 255 LASVVSACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+A+++ CAS A+ G QIH+ +++ +L D+ + NAL+ +Y K G++ EA +F
Sbjct: 251 VANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALF 310
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
M R+ +V+WNA IAGYT NGE +AL
Sbjct: 311 WTMDARD-------------------------------LVTWNAFIAGYTSNGEWLKALH 339
Query: 372 LF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF L E++ P T ++L ACA L +L++G+Q H ++ +H F D VGN
Sbjct: 340 LFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFY-----DTAVGN 394
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
+L+ Y KCG E+ F + +D +SWN++ + + + L L ML +P
Sbjct: 395 ALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRP 454
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL----APLKDHYTCMVDLLGRAGCLDE 546
D VT++ ++ C+ VE+ ++ S + L AP + ++D + G ++
Sbjct: 455 DSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGN--AILDAYSKCGNMEY 512
Query: 547 AKTLIEAMPMQPDAVIWGSLLA 568
A + + + + + V SL++
Sbjct: 513 ANKMFQNLSEKRNLVTCNSLIS 534
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 184/674 (27%), Positives = 287/674 (42%), Gaps = 145/674 (21%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL-YGA 73
A +S A +L C R + + VH +IKS F + N L+ +YAKCG + + A
Sbjct: 142 ALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDA 201
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM---PERDQCSWNSMVSGFAQHD 130
VFD ++ K+V +WN++I GL + ++DA LF+SM P R
Sbjct: 202 YAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTR---------------- 245
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHA-LLSKSRYSSDV 186
N+A + + L CA SV + G Q+H+ +L S+DV
Sbjct: 246 --------------PNYA----TVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADV 287
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA- 245
+ +ALI +Y K G++ A +F M R++V+WN+ I Y NG AL +F + +
Sbjct: 288 SVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASL 347
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ PD VT+ S++ ACA L K G QIHA + R L D +GNALV YAKCG
Sbjct: 348 ETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTE 407
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
EA F SM+S ++++SWN++ + +
Sbjct: 408 EAYHTF------------SMIS-------------------MKDLISWNSIFDAFGEKRH 436
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
+ L L + + + P T ++ CA+L ++ ++ H++ ++ G LS
Sbjct: 437 HSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTG-SLLSNTAPT 495
Query: 426 IFVGNSLIDMYMKCGSVE--------------------------------DGCRIFETMV 453
VGN+++D Y KCG++E D IF M
Sbjct: 496 --VGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMS 553
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE---- 509
E D +WN M+ A+N +ALGL ++ G KPD VT++ +L C+ V
Sbjct: 554 ETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQ 613
Query: 510 -EGRKYFSSMSKEHGLAPLKDHY------------------------TCMVDLLGRAGCL 544
+G S H A L D Y T M+ G
Sbjct: 614 CQGYIIRSCFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMS 673
Query: 545 DEAKTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGE---YVAKKLLEIEPSNSGPYV 598
+EA + M +QPD +I+ S+L+AC + G Y +KL ++P+ Y
Sbjct: 674 EEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVE-QYA 732
Query: 599 LLSNMYAELGRWGE 612
+ ++ A GR E
Sbjct: 733 CVVDLLARGGRISE 746
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 217/470 (46%), Gaps = 51/470 (10%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYF---VKMHSENFALSEYSFGSALSACAGSVDF 167
M RD +W S++ + SEAL F +K H E F + L +C+ +
Sbjct: 1 MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGH-EAFKPDHTVLAAILKSCSALLAP 59
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
+G +H + K + S L++MY KCG + ++FD + + V WN +++ +
Sbjct: 60 NLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGF 119
Query: 228 E-QNGPASDALEVFVRMMASGIE--PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
N +D + VF RMM S E P+ VT+A+V+ CA L G +H +++
Sbjct: 120 SGSNKCDADVMRVF-RMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIK-SGF 177
Query: 285 RNDLVLGNALVDMYAKCGKL-NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
D + GNALV MYAKCG + ++A VFD + ++
Sbjct: 178 DQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKD------------------------- 212
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL---AD 400
VVSWNA+IAG +N E+A LF + + P + T N+L CA+
Sbjct: 213 ------VVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVA 266
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
GRQ H++V++ +D+ V N+LI +Y+K G + + +F TM RD V+W
Sbjct: 267 YYCGRQIHSYVLQ-----WPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTW 321
Query: 461 NAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
NA I G NG +AL LF + L PD VTM+ +L AC+ ++ G++ + +
Sbjct: 322 NAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIF 381
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ L +V + G +EA + M+ D + W S+ A
Sbjct: 382 RHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMK-DLISWNSIFDA 430
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFA---SEIFIQNRLIDVYAKCGCLYGAR 74
DS ++ C V + +H+ I++ + + N ++D Y+KCG + A
Sbjct: 455 DSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYAN 514
Query: 75 KVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
K+F +S K N+ T NS+I+G + G DA+ +F+ M E D +WN MV +A++D
Sbjct: 515 KMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPE 574
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ALG ++ + + S L C + +Q + +S + D+++ +AL+
Sbjct: 575 QALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCF-KDLHLEAALL 633
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCG + A ++F E+++V + ++I Y +G + +AL +F M+ GI+PD +
Sbjct: 634 DAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHI 693
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
S++SAC+ EGL+I + + ++ + +VD+ A+ G+++EA +
Sbjct: 694 IFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTS 753
Query: 314 MPIR 317
+PI
Sbjct: 754 LPIE 757
>gi|302781640|ref|XP_002972594.1| hypothetical protein SELMODRAFT_97233 [Selaginella moellendorffii]
gi|300160061|gb|EFJ26680.1| hypothetical protein SELMODRAFT_97233 [Selaginella moellendorffii]
Length = 620
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/573 (34%), Positives = 338/573 (58%), Gaps = 15/573 (2%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R +H I+ + S F+ N L ++Y + G L A VF+ +++K+V +WN++IT L +
Sbjct: 33 RTIHGLILAAGLQSVTFLGNALANLYGRAGRLDEAELVFESIAHKDVVSWNTMITVLARA 92
Query: 99 GFIDDASRLFASM--PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE-NFALSEYSFG 155
G + A LF M RD SWN+++ ++QH AL F +M E + A +E +F
Sbjct: 93 GNGERALELFQRMIHERRDVVSWNAIIRAYSQHGHRKSALEMFRRMQHECSVAPNEVTFV 152
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
S L A + + +M +H +++ + SS+V++G++L+ M+GKCG V A+++FD M
Sbjct: 153 SVLGAAEEASELRM---IHDRAAENGFHSSNVFVGNSLVHMHGKCGSVHDAKQLFDAMAL 209
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+++ SWNS++ Y NG +A ++F M G+ PD+VT +V+ C SL +++
Sbjct: 210 QSVSSWNSIVDAYAHNGLEREAFKLFRTMQHEGVRPDKVTFLTVLEVCTSL----RQVRL 265
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
L+ LR+D++L AL+ ++A+ +++A+ FD + +++ + ++++ YA+ S
Sbjct: 266 LQELVTSAGLRSDVLLQTALLQVFARNSSISDAKRTFDGVRDKDLFAWNTLLTAYAQCSR 325
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
++ A+ F +M E+N+VSWNAL + Y QN + + AL L ++ E P TF L+A
Sbjct: 326 LEQAKAAFDRMEEKNLVSWNALASAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLDA 385
Query: 395 CANLADLQLGRQAHTHVVKHGLRFL--SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
C D+ R H + + R + SG SD+ + N+LI+MY KCGS + R+F++M
Sbjct: 386 C--FTDISQVRMLHAQISRIIHRSIAESGFLSDVIIDNTLINMYGKCGSPREARRVFDSM 443
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
ER VSWN+++ AQ+G EA LF+ + G KPD+V ++ V C H GL+EE
Sbjct: 444 RERALVSWNSIVTVAAQHGEVAEARKLFRGLQQEGLKPDNVALMSVASVCQHVGLLEEAF 503
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
Y + E+ + ++ Y+C+V LLGR G L+EA+ +I MP +P+ +W +LL +CK+
Sbjct: 504 YYLFQLGTEYRVTAKRERYSCIVGLLGRIGWLEEAEAVIRKMPFKPNEAVWKNLLMSCKI 563
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
H ++ G VAK+LLE++ ++S YV L NMYA
Sbjct: 564 HNDVARGARVAKELLELDSADSATYVTLYNMYA 596
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 175/333 (52%), Gaps = 20/333 (6%)
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGL---QIHARLMRCEKLRNDLVLGNALVDMYA 299
M+ G +PD+V + + +C+S ++ IH L+ L++ LGNAL ++Y
Sbjct: 1 MLLEGAKPDKVGFLTALESCSSSSSSPSARSVRTIHG-LILAAGLQSVTFLGNALANLYG 59
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE--RNVVSWNALI 357
+ G+L+EA VF+ + ++VVS +M++ A+A + + A +F +M+ R+VVSWNA+I
Sbjct: 60 RAGRLDEAELVFESIAHKDVVSWNTMITVLARAGNGERALELFQRMIHERRDVVSWNAII 119
Query: 358 AGYTQNGENEEALGLFRLLKRE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
Y+Q+G + AL +FR ++ E SV P TF ++L A ++L R H ++G
Sbjct: 120 RAYSQHGHRKSALEMFRRMQHECSVAPNEVTFVSVLGAAEEASEL---RMIHDRAAENGF 176
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
S++FVGNSL+ M+ KCGSV D ++F+ M + SWN+++ A NG EA
Sbjct: 177 -----HSSNVFVGNSLVHMHGKCGSVHDAKQLFDAMALQSVSSWNSIVDAYAHNGLEREA 231
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
LF+ M G +PD VT + VL C+ V + + GL T ++
Sbjct: 232 FKLFRTMQHEGVRPDKVTFLTVLEVCTSLRQV----RLLQELVTSAGLRSDVLLQTALLQ 287
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ R + +AK + + D W +LL A
Sbjct: 288 VFARNSSISDAKRTFDGVR-DKDLFAWNTLLTA 319
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 316/545 (57%), Gaps = 49/545 (8%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGR-----VSCARRVFDGMRERNIVSWNSLI-T 225
Q HAL+ ++ + D Y+ +L+ Y + RVFD +R+ N+ WN +I
Sbjct: 53 QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKV 112
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA--------- 276
C E N P A+ ++ M+ + P++ T +V+ AC+ EG+Q+HA
Sbjct: 113 CIENNEPFK-AILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171
Query: 277 ----------------RLMRCEKLRND------LVLGNALVDMYAKCGKLNEARCVFDRM 314
RL+ ++ +D V NA++D Y + G++ AR +F+ M
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231
Query: 315 PIRNVVSE-TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
P R+++S +M+SG+++ V+ AR F +M ER+ +SW+A+I GY Q G EAL +F
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 291
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+++E + P + ++L+ACANL L GR HT+ ++ ++ D +G SL+
Sbjct: 292 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQL------DGVLGTSLV 345
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY KCG ++ +FE M ++ SWNAMI G A +G +A+ LF KM + P+ +
Sbjct: 346 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI---YPNEI 402
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T +GVL AC+H GLV++G F+SM KE+G+ P +HY C+VDLLGRAG L EA+ ++ +
Sbjct: 403 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 462
Query: 554 MPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
+P +P +WG+LL AC+ H N+ LGE V K LLE+EP NSG Y LLSN+YA+ GRW EV
Sbjct: 463 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 522
Query: 614 VRVRKLMRKRGVVKQPGCSWIEI-LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
VRKLM++RG+ PG S I++ G V+ F++ D HP K+IY +L + ++ GY
Sbjct: 523 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGY 582
Query: 673 VPNAS 677
P+ S
Sbjct: 583 EPDPS 587
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 182/367 (49%), Gaps = 11/367 (2%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEI--FIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+L S +R + S R V AR I E+ N +ID Y + G + AR++F+ M +
Sbjct: 175 ILSSAIRMYA-SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPD 233
Query: 83 KNVF-TWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++ TWN++I+G + G ++ A F M ERD+ SW++M+ G+ Q F EAL F +
Sbjct: 234 RSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQ 293
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E ++ S LSACA G +H ++ D +G++L+DMY KCGR
Sbjct: 294 MQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGR 353
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF+ M + + SWN++I +G A DA+++F +M I P+E+T V++A
Sbjct: 354 IDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNA 410
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA ++GL I + + + + +VD+ + G L EA V +P +
Sbjct: 411 CAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPA 470
Query: 322 E-TSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+++ K +V+ + +LE +N + L Y + G EE + +L+K
Sbjct: 471 VWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMK 530
Query: 378 RESVCPT 384
+ T
Sbjct: 531 ERGIKTT 537
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 203/512 (39%), Gaps = 145/512 (28%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-----LYGARKVFDKMSNKNVF 86
+ S+ ++ HA I+++ + +I L+ YA + +VFD + NVF
Sbjct: 45 TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVF 104
Query: 87 TWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF--VKMHS 144
WN +I ++ ++ F L Y+ V HS
Sbjct: 105 LWNCMIKVCIE------------------------------NNEPFKAILLYYEMVVAHS 134
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--- 201
++Y++ + L AC+ S G QVHA L K D ++ S+ I MY GR
Sbjct: 135 RP---NKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191
Query: 202 -----------------------------VSCARRVFDGMRERNIV-------------- 218
V AR +F+GM +R+++
Sbjct: 192 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCG 251
Query: 219 ------------------SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
SW+++I Y Q G +ALE+F +M I P + L SV+S
Sbjct: 252 MVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLS 311
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
ACA+L A +G IH R ++ D VLG +LVDMYAKCG+++ A VF++M + V
Sbjct: 312 ACANLGALDQGRWIHTYAKR-NSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVS 370
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S +M+ G A +G E+A+ LF +
Sbjct: 371 SWNAMIGGLA-------------------------------MHGRAEDAIDLF---SKMD 396
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P TF +LNACA+ +Q G + + +R G E I ++D+ + G
Sbjct: 397 IYPNEITFVGVLNACAHGGLVQKGL-----TIFNSMRKEYGVEPQIEHYGCIVDLLGRAG 451
Query: 441 SVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ + ++ ++ E W A++ C ++G
Sbjct: 452 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 483
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG-----SVEDGCRI 448
A +L + Q H H L +G D ++ SL+ Y S E R+
Sbjct: 35 AILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRV 94
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ + + + WN MI C +N +A+ L+ +M++ +P+ T VL ACS +G+V
Sbjct: 95 FDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVV 154
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
EG + + + K HGL + + + G L EA+ +++ + DAV W +++
Sbjct: 155 AEGVQVHAHLVK-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 213
Query: 569 ACKVHRNIMLGEY-VAKKLLEIEPSNS 594
+ GE A++L E P S
Sbjct: 214 G-----YLRFGEVEAARELFEGMPDRS 235
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 345/652 (52%), Gaps = 82/652 (12%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C SV+ ++HA+++K+ ++F+ +LI ++ C L A VF+ + + NV
Sbjct: 28 LHKCTNLDSVN---QIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNV 84
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+NSII R A +N+ F +M
Sbjct: 85 HLYNSII-------------RAHAHNSSHRSLPFNA-----------------FFQMQKN 114
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC- 204
+++ L AC+G + +HA + K + D+++ ++LID Y +CG
Sbjct: 115 GLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLD 174
Query: 205 -ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A +F M ER++V+WNS+I + G A ++F M PD
Sbjct: 175 GAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEM------PDR----------- 217
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
D+V N ++D YAK G+++ A +F+RMP RN+VS +
Sbjct: 218 -----------------------DMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWS 254
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
+MV GY+K + AR++F + +NVV W +IAGY + G EA L+ ++ + P
Sbjct: 255 TMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRP 314
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
++L ACA L LG++ H + + RF G + V N+ IDMY KCG ++
Sbjct: 315 DDGFLLSILAACAESGMLGLGKRIHASMRR--WRFRCGAK----VLNAFIDMYAKCGCLD 368
Query: 444 DGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+F M+ ++D VSWN+MI G A +G+G +AL LF M+ G +PD T +G+LCAC
Sbjct: 369 AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCAC 428
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+HAGLV EGRKYF SM K +G+ P +HY CM+DLLGR G L EA L+ +MPM+P+A+I
Sbjct: 429 THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAII 488
Query: 563 WGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
G+LL AC++H ++ L V ++L ++EPS+ G Y LLSN+YA+ G W V VR M+
Sbjct: 489 LGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKN 548
Query: 623 RGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
G K G S IE+ V+ F V D+ HP + +IY ++ L +++++VGYVP
Sbjct: 549 TGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVGYVP 600
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 182/394 (46%), Gaps = 74/394 (18%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG--CLYGA 73
F D+ + LL +C S+ R +HA + K F +IF+ N LID Y++CG L GA
Sbjct: 117 FPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGA 176
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+F M ++V TWNS+I GL++ G + A +LF MP+RD SWN+M+ G+A+
Sbjct: 177 MSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMD 236
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A F +M N + S ++
Sbjct: 237 TAFELFERMPWRN---------------------------------------IVSWSTMV 257
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G + AR +FD +N+V W ++I Y + G A +A E++ +M +G+ PD+
Sbjct: 258 CGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDG 317
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD- 312
L S+++ACA G +IHA MR + R + NA +DMYAKCG L+ A VF
Sbjct: 318 FLLSILAACAESGMLGLGKRIHAS-MRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSG 376
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M ++VVS SM+ G+A +G E+AL L
Sbjct: 377 MMAKKDVVSWNSMIQGFA-------------------------------MHGHGEKALEL 405
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
F + +E P YTF LL AC + + GR+
Sbjct: 406 FSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRK 439
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/586 (36%), Positives = 317/586 (54%), Gaps = 55/586 (9%)
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
S +L +F++ S F + +A +C + +HA+ S + D ++ S+L
Sbjct: 4 SSSLHHFLRHVS--FPPDPHLLPTAFKSCP---TLPLARALHAVAEVSGLARDPFVASSL 58
Query: 193 IDMYGKCGRVSCARRVFDGMR--------------------------------------E 214
+ Y + G AR +FDGM E
Sbjct: 59 LHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVE 118
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVSACASLAAFKEGLQ 273
N+++WN L++ ++G A DA+ M G+ PD ++ +SA + G Q
Sbjct: 119 PNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQ 178
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H ++ R D + AL+DMY KCG+ E VFD +V S ++++G ++ +
Sbjct: 179 LHGYAVKA-GCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNA 237
Query: 334 SVKSARLMFTKMLER----NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
V A +F + ++R NVVSW +++A QNG++ EA+ FR ++ + P T
Sbjct: 238 QVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIP 297
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+L A AN+A L GR AH ++ G FL D++V ++L+DMY KCG V+D IF
Sbjct: 298 CVLPAFANVAALMHGRSAHCFALRKG--FLH----DVYVSSALVDMYAKCGRVKDARIIF 351
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+TMV R+ VSWNAMI G A G A+ +F ML C +KPD VT +L AC+ AGL E
Sbjct: 352 DTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTE 411
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
EGR YF M E+G++P +HY CMV LLGRAG LDEA LI MP +PDA IWGSLL +
Sbjct: 412 EGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGS 471
Query: 570 CKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQP 629
C+VH N+ L E A+KL +EP N+G YVLLSN+YA W V RVR++M+ G+ K+
Sbjct: 472 CRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEK 531
Query: 630 GCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
GCSWIEI V++ + D HP+ I + L +M+++G+VP+
Sbjct: 532 GCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPS 577
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 198/418 (47%), Gaps = 52/418 (12%)
Query: 21 PFAKLLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
P LL + +S ++ R +HA S A + F+ + L+ Y + G AR +FD
Sbjct: 18 PDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDG 77
Query: 80 MS--NKNVFTWNSIITGLLKWGFIDDASRLFASMP-----ERDQCSWNSMVSGFAQHDRF 132
M + V W++++ G + A RL M E + +WN +VSG + R
Sbjct: 78 MPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRA 137
Query: 133 SEALGYFVKMHSENFALSEYSFGS-ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+A+ MH E + + S ALSA +G Q+H K+ +D + +A
Sbjct: 138 RDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTA 197
Query: 192 LIDMYGKCGRVSCARRVFD-------------------------GMR----------ERN 216
LIDMYGKCG+ + RVFD +R E N
Sbjct: 198 LIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELN 257
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
+VSW S++ C QNG +A+E F M A G EP+ VT+ V+ A A++AA G H
Sbjct: 258 VVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHC 317
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+R + +D+ + +ALVDMYAKCG++ +AR +FD M RNVVS +M+ GYA
Sbjct: 318 FALR-KGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAV 376
Query: 337 SARLMFTKML----ERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCP--THYT 387
+A MF ML + ++V++ L+A TQ G EE F+ + E V P HY
Sbjct: 377 NAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYA 434
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 4/286 (1%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
VS +++H +K+ ++ + LID+Y KCG +VFD+ S+ +V + N++I G
Sbjct: 173 VSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAG 232
Query: 95 LLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALS 150
L + + +A RLF +R + SW S+V+ Q+ + EA+ +F +M ++ +
Sbjct: 233 LSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPN 292
Query: 151 EYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFD 210
+ L A A G H + + DVY+ SAL+DMY KCGRV AR +FD
Sbjct: 293 SVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352
Query: 211 GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
M RN+VSWN++I Y G A +A+ +F M+ +PD VT +++AC +E
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEE 412
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
G + + + +V + + GKL+EA + MP
Sbjct: 413 GRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPF 458
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/691 (33%), Positives = 357/691 (51%), Gaps = 80/691 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ +L +C K V + VHA ++K+ E +++ L+D+Y KCG + A KV
Sbjct: 153 DNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKV 212
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+MS +N TWNS MV +AQ+ EA+
Sbjct: 213 FDEMSERNDVTWNS-------------------------------MVVTYAQNGMNQEAI 241
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M + ++ + +ACA S G Q H L D +GS++++ Y
Sbjct: 242 RVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFY 301
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K G + A VF M +++V+WN ++ Y Q G ALE+ M G+ D VTL+
Sbjct: 302 FKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLS 361
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF----- 311
++++ A G++ HA ++ D+V+ + ++DMYAKCG+++ AR VF
Sbjct: 362 ALLAVAADTRDLVLGMKAHAYCVK-NDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRK 420
Query: 312 -------------------------------DRMPIRNVVSETSMVSGYAKASSVKSARL 340
+ +P NVVS S++ G+ K V AR
Sbjct: 421 KDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVP-PNVVSWNSLIFGFFKNGQVAEARN 479
Query: 341 MFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
MF +M + N+++W +++G QNG A+ +FR ++ + P + + L+ C
Sbjct: 480 MFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCT 539
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
++A L+ GR H +V++ L I + S++DMY KCGS++ +F+ ++
Sbjct: 540 SMALLKHGRAIHGYVMRRDL------SQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKE 593
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+NAMI A +G EAL LFK+M G PDH+T+ VL ACSH GL++EG K F
Sbjct: 594 LYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFK 653
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
M E + P ++HY C+V LL G LDEA I MP PDA I GSLL AC + +I
Sbjct: 654 YMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDI 713
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
L +Y+AK LL+++P NSG YV LSN+YA +G+W +V +R LM+++G+ K PGCSWIE+
Sbjct: 714 ELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEV 773
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
++VF+ D+ HP +EIY+ L +L EM
Sbjct: 774 GQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 171/594 (28%), Positives = 273/594 (45%), Gaps = 77/594 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIK--SQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ LL C+ +++ ++HA +IK FA F+ ++L+ +YAKCG
Sbjct: 54 YGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGA---------- 103
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ A+RLF P + SW +++ + EAL +
Sbjct: 104 ---------------------SEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGY 142
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDMYGK 198
+KM + + + L AC + G VHA + K+ + VY+ ++L+DMYGK
Sbjct: 143 IKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGK 202
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
CG V A +VFD M ERN V+WNS++ Y QNG +A+ VF M G+E V L+
Sbjct: 203 CGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGF 262
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ACA+ A EG Q H L L D VLG+++++ Y K G + EA VF M +++
Sbjct: 263 FTACANSEAVGEGRQGHG-LAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKD 321
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
VV+ +V+GYA Q G E+AL + +++
Sbjct: 322 VVTWNLVVAGYA-------------------------------QFGMVEKALEMCCVMRE 350
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
E + T LL A+ DL LG +AH + VK+ E D+ V + +IDMY K
Sbjct: 351 EGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDF------EGDVVVSSGIIDMYAK 404
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CG ++ R+F + ++D V WN M+ CA+ G EAL LF +M L P+ V+ +
Sbjct: 405 CGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSL 464
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP--- 555
+ G V E R F+ M G+ P +T M+ L + G A + M
Sbjct: 465 IFGFFKNGQVAEARNMFAEMCSS-GVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVG 523
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL-LSNMYAELG 608
++P+++ S L+ C + G + ++ + S S + + +MYA+ G
Sbjct: 524 IRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCG 577
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 210/455 (46%), Gaps = 53/455 (11%)
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SR 181
S +H R EA+ +MHS N + +G+ L C + Q+HA + K
Sbjct: 24 SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPT 83
Query: 182 YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV 241
++ + ++ S L+ +Y KCG A R+F N+ SW ++I + + G +AL ++
Sbjct: 84 FALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYI 143
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
+M G+ PD L +V+ AC L + G +HA +++ L+ + + +LVDMY KC
Sbjct: 144 KMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKC 203
Query: 302 GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYT 361
G + +A VFD M RN V+ SMV YA
Sbjct: 204 GAVEDAGKVFDEMSERNDVTWNSMVVTYA------------------------------- 232
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
QNG N+EA+ +FR ++ + V T ACAN + GRQ HGL + G
Sbjct: 233 QNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQG------HGLAVVGG 286
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
E D +G+S+++ Y K G +E+ +F M +D V+WN ++ G AQ G +AL +
Sbjct: 287 LELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCC 346
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH------YTCMV 535
M G + D VT+ +L + + R M K H D + ++
Sbjct: 347 VMREEGLRFDCVTLSALLAVAA------DTRDLVLGM-KAHAYCVKNDFEGDVVVSSGII 399
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
D+ + G +D A+ + + + D V+W ++LAAC
Sbjct: 400 DMYAKCGRMDCARRVFSCV-RKKDIVLWNTMLAAC 433
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/638 (34%), Positives = 343/638 (53%), Gaps = 76/638 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++HA++IK + +I +LI Y+ L A VF+++ + NV +N +I
Sbjct: 39 KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAY--- 95
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
S+ + NS+ A G +KMH + +++ L
Sbjct: 96 -----------SLSGNES---NSLC-----------AFGVLLKMHVDGVLADNFTYPFLL 130
Query: 159 SACAGSVDF-KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
C GS + + VHA + K + D+++ ++LID Y +CG V A +VF GM ER++
Sbjct: 131 KGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDV 190
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWNS++ +NG AL+VF M P+
Sbjct: 191 VSWNSMVGGLVKNGDLDGALKVFDEM------PER------------------------- 219
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
D V N ++D + K G++++A +F+RM R++VS ++MV GY+K +
Sbjct: 220 ---------DRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDM 270
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
AR++F + +N+V W +I+GY + G+ +EA+ L +++ + F ++L ACA
Sbjct: 271 ARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAE 330
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERD 456
L LG++ H ++ R V NS IDMY KCG V+D R+F M E+D
Sbjct: 331 SGMLGLGKKMHDSFLRSRFR------CSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKD 384
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSWN+MI G +G+G +++ LF M+ G KPD T IG+LCAC+HAGLV EGR YF
Sbjct: 385 LVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFY 444
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
SM + +G+ P +HY CMVDLLGR G L EA L+ +MP +P+A+I G+LL AC++H ++
Sbjct: 445 SMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDV 504
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
L V+K L ++ PS+ G + LLSN+YA+ G W V +VRK M G K G S IE+
Sbjct: 505 KLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEV 564
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
V+ F V+D HP + +IY ++ L ++++VGYVP
Sbjct: 565 EEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQVGYVP 602
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 182/394 (46%), Gaps = 71/394 (18%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKS-VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
D D+ + LL C S S +S + VHA + K F +IF+ N LID Y +CG +
Sbjct: 117 DGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVE 176
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
A KVF M ++V +WNS++ GL+K G +D A ++F MPERD+ SWN+M+ GF +
Sbjct: 177 MAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGE 236
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+A F +M D+ S
Sbjct: 237 MDKAFKLFERMAER---------------------------------------DIVSWST 257
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
++ Y K G + AR +FD +N+V W ++I+ Y + G +A+ + M SG+ D
Sbjct: 258 MVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLD 317
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
+ S+++ACA G ++H +R + R + N+ +DMYAKCG +++A VF
Sbjct: 318 DGFFISILAACAESGMLGLGKKMHDSFLR-SRFRCSTKVLNSFIDMYAKCGCVDDAFRVF 376
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ M E+++VSWN++I G+ +G E+++
Sbjct: 377 NGMKT------------------------------EKDLVSWNSMIHGFGIHGHGEKSIE 406
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
LF + RE P YTF LL AC + + GR
Sbjct: 407 LFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGR 440
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 306/546 (56%), Gaps = 44/546 (8%)
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
D K VH+ + + + +G L+ Y G AR VFD + ERN++ +N +I
Sbjct: 47 DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIR 106
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y N DAL VF M++ G PD T V+ AC+ + GLQ+H + + L
Sbjct: 107 SYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKV-GLD 165
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK-------------- 331
+L +GN L+ +Y KCG L EARCV D M ++VVS SMV+GYA+
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225
Query: 332 -----------------------ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+ +V MF + ++++VSWN +I+ Y +N +
Sbjct: 226 DGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGK 285
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
++ L+ + + V P T ++L AC +L+ L LGR+ H +V + L ++ +
Sbjct: 286 SVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLC------PNMLL 339
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
NSLIDMY +CG +ED R+F+ M RD SW ++I G G A+ LF +M G+
Sbjct: 340 ENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQ 399
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
PD + + +L ACSH+GL+ EG+ YF M+ ++ + P+ +H+ C+VDLLGR+G +DEA
Sbjct: 400 SPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAY 459
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELG 608
+I+ MPM+P+ +WG+LL++C+V+ N+ +G A KLL++ P SG YVLLSN+YA+ G
Sbjct: 460 NIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAG 519
Query: 609 RWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
RW EV +R LM++R + K PG S +E+ V+ F+ D HP +KEIY L +L +MK
Sbjct: 520 RWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMK 579
Query: 669 RVGYVP 674
+GYVP
Sbjct: 580 ELGYVP 585
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 41/339 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRV----HARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
SP L++ S SD R+ H + K +F+ N LI +Y KCGCL AR
Sbjct: 130 SPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARC 189
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDA------------------------------- 104
V D+M +K+V +WNS++ G + DDA
Sbjct: 190 VLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS 249
Query: 105 ------SRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+F ++ ++ SWN M+S + ++ +++ +++M + S L
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
AC +G ++H + + + ++ + ++LIDMY +CG + A+RVFD M+ R++
Sbjct: 310 RACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVA 369
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW SLI+ Y G +A+ +F M SG PD + +++SAC+ EG ++
Sbjct: 370 SWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQM 429
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
K+ + LVD+ + G+++EA + +MP++
Sbjct: 430 TDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 188/410 (45%), Gaps = 60/410 (14%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F +PER+ +N M+ + + + +AL F M S F+ Y++ L AC+
Sbjct: 86 ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
S + ++G Q+H + K ++++G+ LI +YGKCG + AR V D M+ +++VSWNS+
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSM 205
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
+ Y QN DAL++ M +PD T+AS++ A + ++ + L + M EK
Sbjct: 206 VAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS-ENVLYVEEMFMNLEK 264
Query: 284 LRNDLVLGNALVDMYAK--------------------------------CGKLNE---AR 308
LV N ++ +Y K CG L+ R
Sbjct: 265 --KSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGR 322
Query: 309 CVFDRMPIR----NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNG 364
+ + + + N++ E S++ YA+ ++ A+ +F +M R+V SW +LI+ Y G
Sbjct: 323 RIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTG 382
Query: 365 ENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEES 424
+ A+ LF ++ P F +L+AC +H+ ++ G +
Sbjct: 383 QGYNAVALFTEMQNSGQSPDSIAFVAILSAC-----------SHSGLLNEGKFYFKQMTD 431
Query: 425 DIFVGN------SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
D + L+D+ + G V++ I + M ++ + W A++ C
Sbjct: 432 DYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSC 481
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 33/210 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A +L +C ++ RR+H + + + + ++N LID+YA+CGCL A++VF
Sbjct: 301 DAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVF 360
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M ++V +W S+I S + + A+
Sbjct: 361 DRMKFRDVASWTSLI-------------------------------SAYGMTGQGYNAVA 389
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGT-QVHALLSKSRYSSDVYMGSALIDMY 196
F +M + + +F + LSAC+ S G + + + + + L+D+
Sbjct: 390 LFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLL 449
Query: 197 GKCGRVSCARRVFDGMRER-NIVSWNSLIT 225
G+ GRV A + M + N W +L++
Sbjct: 450 GRSGRVDEAYNIIKQMPMKPNERVWGALLS 479
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 335/626 (53%), Gaps = 68/626 (10%)
Query: 46 IKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDAS 105
+KS +F + L+DVYAKCG L DA
Sbjct: 122 VKSGLVDNVFSASALLDVYAKCGRL-------------------------------SDAR 150
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
R+F MP R+ SWN++++G+A+ + ++A+ F++M + +F + L+ G
Sbjct: 151 RVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPS 210
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ + Q+H ++K + + + +A I Y +CG + +RR+FDG++ R+++SWNS++
Sbjct: 211 WYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLG 270
Query: 226 CYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAF-KEGLQIHARLMRCEK 283
Y +G +A+ FVRMM SG++PD + SVVS C+ ++G IH+ +++
Sbjct: 271 AYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKI-G 329
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
L + NA++ MY + +E M+ K F
Sbjct: 330 LEGVTHVCNAMIAMYTR-------------------FTENCMMEDAYKC---------FD 361
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++ ++ VSWN+++ GY+ +G + +AL FR ++ E+V + L +C++LA L+L
Sbjct: 362 SLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRL 421
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
GRQ H+ V++ SG S+ FV +SLI MY KCG V D + FE + V WN+M
Sbjct: 422 GRQVHSLVIQ------SGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSM 475
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHG 523
+ G AQ+G LF +ML DHVT + +L A SH GLV+EG + +SM +
Sbjct: 476 MFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYK 535
Query: 524 LAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+ +HY C VDL GRAG LD+AK LIE+MP QPDA++W +LL AC++H N+ L VA
Sbjct: 536 IPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVA 595
Query: 584 KKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVF 643
L EP YVLLS+MY+ G W + V+K+M+ RG+ K PG SWIE+ V+ F
Sbjct: 596 SHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNEVHSF 655
Query: 644 MVKDKRHPLNKEIYLVLKMLTREMKR 669
D+ HP EI+ +L+ML + +R
Sbjct: 656 NADDRSHPRMDEIFDMLRMLLQVAQR 681
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R+VH+ +I+S F+S F+ + LI +Y+KCG + ARK F++ + WNS++ G +
Sbjct: 423 RQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQH 482
Query: 99 GFIDDASRLFASMPER----DQCSWNSMVSGFAQH---DRFSEALGYFVKMHSENFALSE 151
G + LF+ M + D ++ ++++ ++ D SE L + +
Sbjct: 483 GQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEH 542
Query: 152 YSFGSALSACAGSVD 166
Y+ G L AG +D
Sbjct: 543 YACGVDLYGRAGQLD 557
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 312/544 (57%), Gaps = 31/544 (5%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR-VSCARRVFDGM 212
++C D K Q+HA+ K+ D + +I R + AR VF M
Sbjct: 22 LSKPFTSCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQM 78
Query: 213 RERNIVSWNSLITCYEQNGP---ASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAF 268
E N WN+++ + S+AL +F M+ G ++P+ T SV+ ACA +
Sbjct: 79 PEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRL 138
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF----------------D 312
+EG QIH +++ ++ V+ N LV MY C + +A +F
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDK 197
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R NVV M+ G + +KSA+ +F +M +R+VVSWN +I+GY QNG EA+ L
Sbjct: 198 RKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINL 257
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ ++ ++ P + T ++L A A + L+LG+ H + K+ + E D +G++L
Sbjct: 258 FQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKI------EIDDVLGSAL 311
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCGS+++ ++FET+ +R+ ++W+A+I A +G +A+ F M G P+
Sbjct: 312 VDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPND 371
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
V IG+L ACSHAGLVEEGR +FS M K GL P +HY CMVDLLGRAG L+EA+ LI
Sbjct: 372 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIR 431
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++PD VIW +LL ACK+H+N+ +GE VA+ L+E+ P +SG YV LSN+YA LG W
Sbjct: 432 NMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEA 491
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V RVR M+ + K PGCSWIEI G ++ F+V+D H KEI +L ++ +++ GY
Sbjct: 492 VARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGY 551
Query: 673 VPNA 676
PN
Sbjct: 552 RPNT 555
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 16/311 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF---- 77
F +L +C R+ + + +++H I+K F + F+ + L+ +Y C + A +F
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 78 ------------DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ + NV WN +I G ++ G I A LF MP+R SWN M+SG
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISG 244
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+ F EA+ F +M S N + + S L A A ++G +H K++ D
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEID 304
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+GSAL+DMY KCG + A +VF+ + +RN ++W+++I + +G A DA+ F M
Sbjct: 305 DVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G+ P++V ++SAC+ +EG + +++ L+ + +VD+ + G L
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 306 EARCVFDRMPI 316
EA + MPI
Sbjct: 425 EAEELIRNMPI 435
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/478 (28%), Positives = 222/478 (46%), Gaps = 80/478 (16%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG------ 72
S PF SC K+ D +++HA IK+ IQ+ L C +
Sbjct: 23 SKPFT----SC---KTPRDLKQLHAIFIKTGQ-----IQDPLTAAEVIKFCAFSSRDIDY 70
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWG---FIDDASRLFASM-----PERDQCSWNSMVS 124
AR VF +M N F WN+I+ L + +A LF++M + ++ ++ S++
Sbjct: 71 ARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLK 130
Query: 125 GFAQHDRFSEAL---GYFVK--MHSENFALSEYSFGSALSA---------CAGSVDFKMG 170
A+ R E G VK H + F +S + A C VDF
Sbjct: 131 ACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGS 190
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
Q+ L K + +V + + +ID + G + A+ +FD M +R++VSWN +I+ Y QN
Sbjct: 191 CQME--LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQN 248
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G +A+ +F M +S I+P+ VTL SV+ A A + A + G IH + K+ D VL
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGK-NKIEIDDVL 307
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
G+ALVDMY+KCG ++EA VF+ +P RN
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRN-------------------------------A 336
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
++W+A+I + +G E+A+ F L+ + V P + +L+AC++ ++ GR +H
Sbjct: 337 ITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSH 396
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+VK + G + I ++D+ + G +E+ + M +E D V W A++ C
Sbjct: 397 MVK-----VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGAC 449
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 345/630 (54%), Gaps = 40/630 (6%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
SP KLL SC K+ D ++HAR++ + F + R++ +A +R+ +
Sbjct: 15 SPTIKLLGSC---KNSEDVNKIHARLVTNGFIKNPNLTTRIVLAFA------ASRRPYXV 65
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFAS--MPERDQCSWNSMVSGFAQHDRFSEALG 137
+ VF I R F+ D WN+++ + AL
Sbjct: 66 EFARFVFHEYXI--------------RSFSPGGGDXEDXYLWNAVIKSHSHGTDPRRALL 111
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M ++ ++S L AC+ K G Q+H L K+ SD+++ + LI +Y
Sbjct: 112 LFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYL 171
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV-TLA 256
KCG + AR++FD M +R+ VS+NS+I Y + G A E+F M P+E+ L
Sbjct: 172 KCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLM------PEEMKNLI 225
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S S + A +G+ I ++L E DL+ N+++D Y K G++ +A+ +FD MP
Sbjct: 226 SWNSMISGYAQTSDGVDIASKLF-SEMPDKDLISWNSMIDGYVKHGRIEDAKYLFDVMPR 284
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R+VV+ ++M+ GYAK V A+ +F +M R+VVS+N++IAGY QN N EAL +F +
Sbjct: 285 RDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDM 344
Query: 377 KRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ES + P T +L+A A L L H ++V+ FL G+ +G +LIDM
Sbjct: 345 EKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQF-FLGGK-----LGVALIDM 398
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS++ +F+ + + WNAMI G A +G G A + ++ KPD +T
Sbjct: 399 YSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITF 458
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+G+L ACSH+GLV+EG F M ++H + P HY CMVD+L R+G ++ AK LIE MP
Sbjct: 459 VGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 518
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++P+ VIW + LAAC H+ GE VAK L+ N YVLLSN+YA G+W +V R
Sbjct: 519 IEPNDVIWRTFLAACNHHKEFETGELVAKHLIWEAGYNPSSYVLLSNLYASFGKWKDVRR 578
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
+R +M++R + K PGCSWIE+ G V+ F V
Sbjct: 579 IRTIMKERKIEKVPGCSWIELDGRVHEFFV 608
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 219/470 (46%), Gaps = 72/470 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + +L +C R V + ++H + K+ S++F+QN LI +Y KCG L AR++
Sbjct: 123 VDKFSLSLVLKACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQI 182
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE--RDQCSWNSMVSGFAQHDRFSE 134
FD+M ++ ++NS+I G +K G + A LF MPE ++ SWNSM+SG+AQ S+
Sbjct: 183 FDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQT---SD 239
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY------SSDVYM 188
+ K+ SE S+ S + G H + ++Y DV
Sbjct: 240 GVDIASKLFSEMPDKDLISWNSMID----------GYVKHGRIEDAKYLFDVMPRRDVVT 289
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASG 247
S +ID Y K G V A+ +FD M R++VS+NS+I Y QN +ALE+F M S
Sbjct: 290 WSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESH 349
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ PDE TL V+SA A L + + +H ++ + LG AL+DMY+KCG + A
Sbjct: 350 LSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG-KLGVALIDMYSKCGSIQHA 408
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VF + +++ WNA+I G +G E
Sbjct: 409 MLVFKGIE-------------------------------NKSIDHWNAMIGGLAIHGLGE 437
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL------RFLSG 421
A + ++R S+ P TF LLNAC +H+ +VK GL R
Sbjct: 438 SAFDMLLQIERRSIKPDDITFVGLLNAC-----------SHSGLVKEGLLCFELMRRKHK 486
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQN 470
E + ++D+ + GS+E + E M +E + V W + C +
Sbjct: 487 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHH 536
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/641 (34%), Positives = 350/641 (54%), Gaps = 78/641 (12%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
R Q+ S++F+ + I +++ GC+ AR VFD+ NKN WN
Sbjct: 248 RKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWN-------------- 293
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK-MHSENFALSEYSFGSALSACA 162
+M+ + Q++ EA+ F++ + SE + + S L+A +
Sbjct: 294 -----------------TMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVS 336
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
K+ Q HA + KS S + + +A++ MY +C V + +VFD M ER+ VSWN+
Sbjct: 337 QLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNT 396
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I+ + QNG +AL + M D VT +++SA ++L G Q HA L+R
Sbjct: 397 IISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIR-- 454
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCV-FDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
R + F+ M E+ ++ YAK+ S+++A L+
Sbjct: 455 -------------------------RGIQFEGM-------ESYLIDMYAKSGSIRTAELL 482
Query: 342 FTKML--ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
F + +R+ +WNA+IAGYTQNG NE+A+ L + + ++V P T ++L AC+++
Sbjct: 483 FEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ L RQ H ++ RFL E +++VG SL D Y KCG++ +F E++ V+
Sbjct: 543 SMGLARQLHGFSIR---RFL---EKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVT 596
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
+ M++ Q+G G AL L+ ML G +PD VT + +L AC+++GLV+EG + F SM
Sbjct: 597 YTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESME 656
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV-IWGSLLAACKVHRNIML 578
K H + P +HY C+ D+LGR G + EA ++ + + + IWGSLL +C+ H + L
Sbjct: 657 KVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFEL 716
Query: 579 GEYVAKKLLE--IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
G+ VAKKLL ++ +G +VLLSN+YAE G W +V RVRK M+++G+ K+ GCSW+EI
Sbjct: 717 GKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEI 776
Query: 637 LGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
G VN F+ +D++HP + EIY +L MLT +MK GY P S
Sbjct: 777 AGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYS 817
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 183/670 (27%), Positives = 310/670 (46%), Gaps = 126/670 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEI----FIQNRLIDVYAKCGCLYG 72
D F+ L +C +K + + +H+ ++S + + N L+++YA C Y
Sbjct: 115 FDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHEY- 173
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
A VFD M +NV WN++I F + +R+
Sbjct: 174 ALNVFDVMRRRNVVAWNTLIL-------------------------------SFVKMNRY 202
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGS 190
+A+ F M +++ S +F + A + D + + + K +Y SDV++ S
Sbjct: 203 PQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVS 262
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS--GI 248
+ I M+ G + AR VFD +N WN++I Y QN +A++VF++ + S G+
Sbjct: 263 SAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGV 322
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG-NALVDMYAKCGKLNEA 307
D+VTL SV++A + L K Q HA +++ L L++ NA++ MY++C ++ +
Sbjct: 323 -CDDVTLLSVLTAVSQLQQIKLAEQFHAFVIK--SLPGSLIIILNAVMVMYSRCNHVDTS 379
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VFD+M LER+ VSWN +I+ + QNG +E
Sbjct: 380 LKVFDKM-------------------------------LERDAVSWNTIISAFVQNGFDE 408
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EAL L ++++ T LL+A +NL +L +G+Q H ++++ G++F G ES
Sbjct: 409 EALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQF-EGMES--- 464
Query: 428 VGNSLIDMYMKCGSVEDGCRIFET--MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
LIDMY K GS+ +FE +RD +WNA+I G QNG +A+ L K+ML+
Sbjct: 465 ---YLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLV 521
Query: 486 CGEKPDHVTMIGVLCACSHAG---------------LVEEGRKYFSSMSKEHG------- 523
P+ VT+ +L ACS G +E+ +S++ +
Sbjct: 522 QNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISY 581
Query: 524 ------LAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAACK- 571
P K+ YT M+ G+ G A TL ++M ++PDAV + ++L+AC
Sbjct: 582 AENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNY 641
Query: 572 ---VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
V + + E + +K+ +I+PS Y +++M LGR G VV + ++ G
Sbjct: 642 SGLVDEGLQIFESM-EKVHKIKPSIEH-YCCVADM---LGRVGRVVEAYEFVKGLGEDAN 696
Query: 629 PGCSWIEILG 638
W +LG
Sbjct: 697 TMEIWGSLLG 706
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 221/476 (46%), Gaps = 53/476 (11%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF--ALSEYSFGSALSAC 161
A L S+P WNS++ GF ++ +AL + KM S + Y+F S L AC
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDV----YMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
A + D G +H+ +S +++ + ++L++MY C A VFD MR RN+
Sbjct: 128 ALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNV 186
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
V+WN+LI + + A+E F M+ + P VT ++ A + L + +++
Sbjct: 187 VAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRT-VKMFYG 245
Query: 278 LMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
MR ++ +D+ + ++ + M++ G ++ AR VFDR
Sbjct: 246 FMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDR---------------------- 283
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF--RLLKRESVCPTHYTFGNLLN 393
L +N WN +I Y QN EA+ +F L E VC T ++L
Sbjct: 284 ---------CLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVC-DDVTLLSVLT 333
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
A + L ++L Q H V+K L G S I + N+++ MY +C V+ ++F+ M+
Sbjct: 334 AVSQLQQIKLAEQFHAFVIKS----LPG--SLIIILNAVMVMYSRCNHVDTSLKVFDKML 387
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
ERD VSWN +I QNG+ EAL L +M D VT +L A S+ + G++
Sbjct: 388 ERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQ 447
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA-MPMQPDAVIWGSLLA 568
+ + + G+ + + ++D+ ++G + A+ L E D W +++A
Sbjct: 448 THAYLIRR-GIQ-FEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIA 501
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 166/376 (44%), Gaps = 44/376 (11%)
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA--SGIEPDEVTLAS 257
G+ A + D + + V WNS+I + N AL ++ +M + S D T +S
Sbjct: 63 GQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSS 122
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRN---DLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ ACA G IH+ +R N ++ N+L++MYA C + A VFD M
Sbjct: 123 TLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-QHEYALNVFDVM 181
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
RNVV+WN LI + + +A+ F
Sbjct: 182 R-------------------------------RRNVVAWNTLILSFVKMNRYPQAVEAFA 210
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ +SV P+ TF NL A + L D + + + + K G +++ SD+FV +S I
Sbjct: 211 NMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYV----SDVFVVSSAIL 266
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP-DHV 493
M+ G ++ +F+ + ++ WN MIV QN EA+ +F + L E D V
Sbjct: 267 MFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDV 326
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T++ VL A S ++ ++ + + K + + MV + R +D + + +
Sbjct: 327 TLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMV-MYSRCNHVDTSLKVFDK 385
Query: 554 MPMQPDAVIWGSLLAA 569
M ++ DAV W ++++A
Sbjct: 386 M-LERDAVSWNTIISA 400
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 85/228 (37%), Gaps = 34/228 (14%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
+KQ++ ++ A +L +C S+ R++H I+ +++ L D Y+K
Sbjct: 516 LKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSK 575
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
CG + A VF + PE++ ++ +M+ +
Sbjct: 576 CGAISYAENVFLR-------------------------------TPEKNSVTYTTMMMCY 604
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK-SRYSSD 185
QH AL + M +F + LSAC S G Q+ + K +
Sbjct: 605 GQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPS 664
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRE--RNIVSWNSLITCYEQNG 231
+ + DM G+ GRV A G+ E + W SL+ +G
Sbjct: 665 IEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHG 712
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/658 (33%), Positives = 352/658 (53%), Gaps = 75/658 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L V + VHA+ IK S +F+ N L+++YAKC
Sbjct: 160 FSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKC-------------- 205
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
G +++A +F M RD SWN++++G + R EAL F
Sbjct: 206 -----------------GLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHD 248
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
S L+E ++ + ++ CA + Q+H+ + K + S + +AL+D Y K G+
Sbjct: 249 SRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQ 308
Query: 202 VSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A VF M +N+VSW ++I QNG A +F RM G+ P+++T +++++
Sbjct: 309 LDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
S A+F QIHA++++ ++ P
Sbjct: 369 V--SEASFPP--QIHAQVIKTN----------------------------YECTPTVG-- 394
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
T+++ Y+K S + A +F + +++VVSW+A++ Y Q G+ A F +
Sbjct: 395 --TALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHG 452
Query: 381 VCPTHYTFGNLLNACAN-LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P +T + ++ACA+ A + LGRQ H +KH + V ++L+ MY +
Sbjct: 453 LKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRC------HDALCVSSALVSMYARK 506
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+E+ +FE +RD +SWN+M+ G AQ+GY +AL +F++M + G D +T + V+
Sbjct: 507 GSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVI 566
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
C+HAGLVEEG++YF M +++G+ P DHY CMVDL RAG LDE +LIE MP
Sbjct: 567 MGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAG 626
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
IW +LL AC+VH+N+ LG+ A+KLL +EP +S YVLLSN+Y+ G+W E VRKL
Sbjct: 627 PTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKL 686
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M + V K+ GCSWI+I V+ F+ DK HPL+++IY L+ +T ++K+ GY P+ S
Sbjct: 687 MDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTS 744
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 183/372 (49%), Gaps = 47/372 (12%)
Query: 134 EALGYFVKMHS-ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSA 191
+AL +F+ H + + + + C D +G Q+HAL + + D+ +G++
Sbjct: 37 QALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTS 96
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+DMY V R+VF+GM +RN+V+W SL+T Y Q G D + +F RM A G+ P+
Sbjct: 97 LVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPN 156
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMR---CEKLRNDLVLGNALVDMYAKCGKLNEAR 308
T +SV+S AS G +HA+ ++ C + + + N+L++MYAKCG + EAR
Sbjct: 157 PFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCC----STVFVCNSLMNMYAKCGLVEEAR 212
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF RM R ++VSWN L+AG NG + E
Sbjct: 213 VVFCRMETR-------------------------------DMVSWNTLMAGLVLNGRDLE 241
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
AL LF + T T+ ++N CANL L L RQ H+ V+KHG V
Sbjct: 242 ALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGN------V 295
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMV-ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+L+D Y K G ++ +F M ++ VSW AMI GC QNG A LF +M G
Sbjct: 296 MTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDG 355
Query: 488 EKPDHVTMIGVL 499
P+ +T +L
Sbjct: 356 VAPNDLTYSTIL 367
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 196/382 (51%), Gaps = 45/382 (11%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ L S ++ +++ C K + R++H+ ++K F S + L+D Y K G L A
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312
Query: 74 RKVFDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
VF MS ++NV +W ++I G ++ G I A+ LF+ M E G A +D
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRE----------DGVAPND-- 360
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
L Y S +SE SF Q+HA + K+ Y +G+AL
Sbjct: 361 ---LTY-----STILTVSEASFPP---------------QIHAQVIKTNYECTPTVGTAL 397
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ Y K A +F + ++++VSW++++TCY Q G + A F++M G++P+E
Sbjct: 398 MVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNE 457
Query: 253 VTLASVVSACASLAAFKE-GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
T++S + ACAS AA + G Q HA ++ + + L + +ALV MYA+ G + A+CVF
Sbjct: 458 FTISSAIDACASPAAGVDLGRQFHAISIK-HRCHDALCVSSALVSMYARKGSIENAQCVF 516
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENE 367
+R R+++S SM+SGYA+ + A +F +M ++ + +++ ++I G G E
Sbjct: 517 ERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVE 576
Query: 368 EALGLFRLLKRE-SVCPT--HY 386
E F L+ R+ + PT HY
Sbjct: 577 EGQQYFDLMVRDYGITPTMDHY 598
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 155/337 (45%), Gaps = 44/337 (13%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L ++ C S+ G Q+HA +RC D+ +G +LVDM
Sbjct: 58 LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDM----------------- 100
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
Y SV R +F ML+RNVV+W +L+ GY Q G + + LF
Sbjct: 101 --------------YMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFF 146
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++ E V P +TF ++L+ A+ + LG+ H +K G S +FV NSL++
Sbjct: 147 RMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCC------STVFVCNSLMN 200
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF---KKMLLCGEKPD 491
MY KCG VE+ +F M RD VSWN ++ G NG EAL LF + + +
Sbjct: 201 MYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTEST 260
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
+ T+I + H GL R+ SS+ K HG + T ++D +AG LD+A +
Sbjct: 261 YSTVINLCANLKHLGL---ARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQLDKALDVF 316
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
M + V W +++ C + +I L + ++ E
Sbjct: 317 LLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRE 353
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 306/514 (59%), Gaps = 23/514 (4%)
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+A++ Y K + ARR+FD M +++VSWNS++T Y +NG L+ F
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFF--------- 81
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-DLVLGNALVDMYAKCGKLNEAR 308
+E+ VVS + F E +++ EK+ N + V ++ +A+ GK+ EAR
Sbjct: 82 -EEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEAR 140
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD+MPIRNVV+ +M++ Y + V A +F +M E+N +SW +I GY + G+ +E
Sbjct: 141 RLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDE 200
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
A L + + P TF L++CA+LA LQ+G+Q H V+K SG +D+FV
Sbjct: 201 ARQLLNQMPYRNK-PDQSTFACGLSSCAHLAALQVGKQLHQLVMK------SGYATDLFV 253
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
N+LI MY KCGS+ +F+ + D VSWN++I A NG G EAL LF KM + G
Sbjct: 254 SNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGV 313
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
PD VT +G+L ACSH GL+++G K F M + + + PL +HY CMVDLLGRAG L+EA
Sbjct: 314 APDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAF 373
Query: 549 TLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELG 608
L+ M + +A IWG+LL AC++H N+ L ++ A+KLLE EP + YVLLSNM AE G
Sbjct: 374 QLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAG 433
Query: 609 RWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
RW EV RVR+LM+++G KQPG SWIE+ V+ F+ +D HP E+ +L+ LT M+
Sbjct: 434 RWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMR 493
Query: 669 RVGYVPNASDDEAYEEQNGSNSTSDCQIDFQVET 702
G +P D +E G TS + FQ+ +
Sbjct: 494 NTGDMPLELD--VTKEVAG---TSHYNMQFQIPS 522
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 142/244 (58%), Gaps = 1/244 (0%)
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
+A+ G + AR++FD+M +NV WN++I ++ +D+A LF MPE++ SW +++
Sbjct: 130 FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVI 189
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
+G+ + + EA +M N + +F LS+CA ++G Q+H L+ KS Y+
Sbjct: 190 NGYVRMGKLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYA 248
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
+D+++ +ALI MY KCG +S A +F + ++VSWNSLI Y NG +AL++F +M
Sbjct: 249 TDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKM 308
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
G+ PDEVT ++SAC+ + +GL++ +++ + +VD+ + G+
Sbjct: 309 EVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGR 368
Query: 304 LNEA 307
L EA
Sbjct: 369 LEEA 372
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 193/416 (46%), Gaps = 49/416 (11%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ YAK AR++FD M K++ +WNS++TG + G + + F M ERD
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SWN MV GF + + + +F K+ + N S ++ G F + L
Sbjct: 91 SWNLMVDGFVEVGDLNSSWEFFEKIPNPNTV-------SWVTMLCGFARFGKIAEARRLF 143
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ +V +A+I Y + V A +F M E+N +SW ++I Y + G +A
Sbjct: 144 DQMPI-RNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEAR 202
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++ +M +PD+ T A +S+CA LAA + G Q+H +M+ DL + NAL+ M
Sbjct: 203 QLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMK-SGYATDLFVSNALITM 260
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
YAKCG ++ A +F + +VVS S+++ YA
Sbjct: 261 YAKCGSISSAELLFKDIDHFDVVSWNSLIAAYA--------------------------- 293
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGL 416
NG EAL LF ++ E V P TF +L+AC+++ + G + +V+ + +
Sbjct: 294 ----LNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNI 349
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
L+ + ++D+ + G +E+ ++ M + + W A++ C +G
Sbjct: 350 EPLAEHYA------CMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHG 399
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 47/313 (15%)
Query: 294 LVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++ Y + G+L +AR +F+ +P + N V +MV+GYAK AR +F M +++VS
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 60
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
WN+++ GYT+NGE L F + V ++ +++ + DL + +
Sbjct: 61 WNSMLTGYTRNGEMRLGLQFFEEMAERDVV----SWNLMVDGFVEVGDLNSSWEFFEKI- 115
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ +++ + + G + + R+F+ M R+ V+WNAMI QN +
Sbjct: 116 ---------PNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCH 166
Query: 473 GTEALGLFKKM------------------------------LLCGEKPDHVTMIGVLCAC 502
EA+ LF +M + KPD T L +C
Sbjct: 167 VDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSC 226
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+H ++ G++ + K G A ++ + + G + A+ L + + D V
Sbjct: 227 AHLAALQVGKQLHQLVMKS-GYATDLFVSNALITMYAKCGSISSAELLFKDID-HFDVVS 284
Query: 563 WGSLLAACKVHRN 575
W SL+AA ++ N
Sbjct: 285 WNSLIAAYALNGN 297
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/679 (32%), Positives = 349/679 (51%), Gaps = 68/679 (10%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
+ L+ + LL C R ++++ +HARIIK + +
Sbjct: 30 SLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFD--------------------- 68
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
FD +F WNS+++ K G +A +F MP RD SWN+M+SGF ++ F
Sbjct: 69 --FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDT 126
Query: 135 ALGYFVKMHSENFALSEY---SFGSALSACAG---SVDFKMGTQVHALLSKSRYSSDVYM 188
+ +F +M N + + + LS C G + + +H L+ + ++ +
Sbjct: 127 SFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITV 186
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG- 247
G+ALI Y KC S R+VFD M ERN+V+W ++I+ QN D+L +F +M G
Sbjct: 187 GNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGS 246
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+ P+ +T S + AC+ L ++G +IH L + +++DL + +AL+D+Y+KCG L+
Sbjct: 247 VSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKL-GMQSDLCIESALMDLYSKCGSLD-- 303
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
+A +F E + VS ++ + QNG E
Sbjct: 304 -----------------------------AAWQIFESAEELDGVSLTVILVAFAQNGFEE 334
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ +F + + +L L LG+Q H+ ++K + F
Sbjct: 335 EAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFC------ENPF 388
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
VGN L++MY KCG + D +F M +++ VSWN++I A++G G +AL +++M + G
Sbjct: 389 VGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEG 448
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
P VT + +L ACSHAGLVE+G + SM+ +HG++P +HY C+VD+LGRAG L+EA
Sbjct: 449 VAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEA 508
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
K IE +P ++W +LL AC +H + +G+Y A +L P++ PYVL++N+Y+
Sbjct: 509 KKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSE 568
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W E K M++ GV K+ G SWIEI VN F+V DK HP I+ VL L + +
Sbjct: 569 GNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHL 628
Query: 668 KRVGYVPNASDDEAYEEQN 686
K GYVP+ Y EQ+
Sbjct: 629 KDEGYVPDKKFILFYLEQD 647
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/502 (39%), Positives = 315/502 (62%), Gaps = 8/502 (1%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+HA L ++ +S D +M L+ KC + A R+F N+ + +LI + +G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
DA++++ RM+ I PD +AS++ AC S A +EG ++H+R ++ N LV
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 187
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++++Y KCG+L +AR VF+ MP +VV+ T M+S Y+ V+ A +F+++ ++ V
Sbjct: 188 -IMELYGKCGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I G+ +N E AL FR ++ E+V P +T +L+AC+ L L++GR H+++
Sbjct: 246 WTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + E ++FVGN+LI+MY +CGS+++ +F+ M +RD +++N MI G + NG
Sbjct: 306 KFEI------ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGK 359
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
+A+ LF+ M+ +P +VT +GVL ACSH GLV+ G K F SM++++G+ P +HY
Sbjct: 360 SRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYG 419
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR G L+EA LI M M PD ++ G+LL+ACK+H+N+ LGE VAK L + +
Sbjct: 420 CMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQA 479
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
+SG YVLLS++YA G+W E +VR M++ G+ K+PGCS IE+ ++ F++ D RHP
Sbjct: 480 DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPR 539
Query: 653 NKEIYLVLKMLTREMKRVGYVP 674
+ IY L+ L R ++ GY P
Sbjct: 540 KERIYEKLEELNRLLRLEGYHP 561
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG 68
+++ D D+ A +L +C ++ + R VH+R +K +S ++ R++++Y KCG
Sbjct: 137 RMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG 196
Query: 69 CLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQ 128
L AR+VF++M ++V +I+ G +++A +F+ + +D W +M+ GF +
Sbjct: 197 ELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVR 255
Query: 129 HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
++ + AL F M EN +E++ LSAC+ ++G VH+ + K ++++
Sbjct: 256 NEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFV 315
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
G+ALI+MY +CG + A+ VFD M++R+++++N++I+ NG + A+E+F M+ +
Sbjct: 316 GNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRL 375
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
P VT V++AC+ G +I + R + + +VD+ + G+L EA
Sbjct: 376 RPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEA 434
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 214/485 (44%), Gaps = 102/485 (21%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L LD LL RSK ++ +HA++I++ + + F+ L+ +KC + A
Sbjct: 44 LKSLDQKQIISLLQ---RSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYA 100
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
++F N NV+ + ++I G + G DA +L++ M HD
Sbjct: 101 SRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRM----------------LHD--- 141
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+ Y S L AC + + G +VH+ K SS+ + ++
Sbjct: 142 ------------SILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIM 189
Query: 194 DMYGKCGRVSCARRVFDGM------------------------------RERNIVSWNSL 223
++YGKCG + ARRVF+ M R ++ V W ++
Sbjct: 190 ELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I + +N + ALE F M + P+E T+ V+SAC+ L A + G +H+ MR +
Sbjct: 250 IDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS-YMRKFE 308
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ +L +GNAL++MY++CG ++EA+ VFD M R+V++ +M+S
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS---------------- 352
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
G + NG++ +A+ LFR++ + PT+ TF +LNAC++ +
Sbjct: 353 ---------------GLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDF 397
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
G + + H + G E I ++D+ + G +E+ + TM + D +
Sbjct: 398 GFK-----IFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 452
Query: 463 MIVGC 467
++ C
Sbjct: 453 LLSAC 457
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
LQ + + + H +G D F+ L+ KC +++ RIF+ + +
Sbjct: 56 LQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLY 115
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+I G +G +A+ L+ +ML PD+ M +L AC + EGR+ S K
Sbjct: 116 TALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALK 175
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
GL+ + +++L G+ G L +A+ + E MP
Sbjct: 176 L-GLSSNRLVRLRIMELYGKCGELGDARRVFEEMP 209
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/635 (33%), Positives = 343/635 (54%), Gaps = 40/635 (6%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
+S +++H + KS S FIQN LI++Y KCG L A+ +FD + ++N +I+G
Sbjct: 82 LSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISG 141
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
+K G +D A LF MP + S+ +M+ GF+Q++ +++A+ F +M + +E +
Sbjct: 142 YVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTI 201
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
+ +SA + +H L+ K + V + + L+ MY C + AR +FD M E
Sbjct: 202 ATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPE 261
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVR-------------------------------M 243
+NIVSWN ++ Y + G A VF R M
Sbjct: 262 KNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSM 321
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
+++G EP++V + ++S C A EG Q+ + +++ D + + ++ +YA CG+
Sbjct: 322 ISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFI-QSTIIHLYAACGR 380
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
+NEA F NV S ++++GY + + A +F +M ER+V SW+ +I+GYTQN
Sbjct: 381 INEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQN 440
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
+ AL LF + + P T ++L+A A L+ GR AH +V + +
Sbjct: 441 EQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDN-- 498
Query: 424 SDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV--SWNAMIVGCAQNGYGTEALGLFK 481
+ ++IDMY KCGS+ + +F + E+ WNA+I G A +G+ +L +F
Sbjct: 499 ----LSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFS 554
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
+ K + +T IGVL AC H GLVE G+++F SM EH + P HY CMVDLLGRA
Sbjct: 555 DLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRA 614
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G L+EA+ +I +MPM+ D VIWG+LLAAC+ H N+ +GE A+ L +EPS+ VLLS
Sbjct: 615 GRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLS 674
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEI 636
NMYA+ G+W + VR+ M+ + + PG S + +
Sbjct: 675 NMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGVAL 709
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 227/476 (47%), Gaps = 61/476 (12%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
SAL C+ + G Q+H L+SKS S+ ++ ++LI+MYGKCG + A+ +FD
Sbjct: 71 SALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRS 130
Query: 216 NIVSWNSLITCY-------------------------------EQNGPASDALEVFVRMM 244
+ VS+N +I+ Y QN + A+E+F +M
Sbjct: 131 DPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMR 190
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL-GNALVDMYAKCGK 303
G+ P+EVT+A++VSA + +H +++ L + VL L+ MY C
Sbjct: 191 NVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIK--MLFEEFVLVSTNLLRMYCVCSS 248
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
L EAR +FD MP +N+VS M++GY+KA V SAR++F ++ +++V+W +I GY +
Sbjct: 249 LVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRV 308
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG-------- 415
EAL ++R + P +L++ C + G+Q + VVK G
Sbjct: 309 ERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQ 368
Query: 416 -----------------LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L+F G + ++ N+LI Y++ ++ +F M ERD
Sbjct: 369 STIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVF 428
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW+ MI G QN AL LF KM+ G KP+ VTM+ VL A + +G ++EGR +
Sbjct: 429 SWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGR-WAHEY 487
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV-IWGSLLAACKVH 573
+ + + ++D+ + G ++ A + + + V W +++ VH
Sbjct: 488 VHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVH 543
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 161/296 (54%), Gaps = 4/296 (1%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ C R+ ++++ +++ + ++K F FIQ+ +I +YA CG + A F S +N
Sbjct: 336 LISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKEN 395
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +WN++I G ++ ID A LF MPERD SW++M+SG+ Q+++ + AL F KM +
Sbjct: 396 VASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVA 455
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+E + S LSA A S K G H + + + + +A+IDMY KCG ++
Sbjct: 456 SGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINN 515
Query: 205 ARRVFDGMRER--NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A VF +RE+ + WN++I +G A+ +L++F + I+ + +T V++AC
Sbjct: 516 ALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTAC 575
Query: 263 ASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ + G + H M+ E + D+ +VD+ + G+L EA + MP++
Sbjct: 576 CHVGLVESGKR-HFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMK 630
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 38/300 (12%)
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
E+ L S + C+ +G QIH L+ L ++ + N+L++MY KCG L +A+ +F
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHC-LVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIF 124
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D P + VS M+SGY K+ + A +F +M + VS+ +I G++QN +A+
Sbjct: 125 DVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVE 184
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF+ ++ V P T L++A ++ + R H V+K + F E + V +
Sbjct: 185 LFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIK--MLF----EEFVLVSTN 238
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY------------------- 472
L+ MY C S+ + +F+ M E++ VSWN M+ G ++ G+
Sbjct: 239 LLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTW 298
Query: 473 GT------------EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
GT EAL +++ M+ G +P+ V M+ ++ C + EG++ S++ K
Sbjct: 299 GTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVK 358
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/510 (39%), Positives = 294/510 (57%), Gaps = 8/510 (1%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRV---SCARRVFDGMRERNIVSWNSLITCYE 228
+VHA + Y+ + L+ + V S R +F + N +W +LI Y
Sbjct: 26 EVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTALIRAYA 85
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
GP S AL + M + P T +++ SACA++ G Q+HA+ + +DL
Sbjct: 86 LRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDL 145
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ NA++DMY KCG L AR VFD MP R+V+S T ++ Y + +++AR +F + +
Sbjct: 146 YVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVK 205
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
++V+W A++ GY QN +AL +FR L+ E V T +++ACA L +
Sbjct: 206 DMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIR 265
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
G G ++ VG++LIDMY KCG+VE+ +F+ M ER+ S+++MIVG A
Sbjct: 266 DIAESSGF----GVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFA 321
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G A+ LF ML G KP+HVT +GVL ACSHAGLV++G++ F+SM K +G+AP
Sbjct: 322 IHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTA 381
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+ Y CM DLL RAG L++A L+E MPM+ D +WG+LL A VH N + E +K+L E
Sbjct: 382 ELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFE 441
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL-GHVNVFMVKD 647
+EP N G Y+LLSN YA GRW +V +VRKL+R++ + K PG SW+E G ++ F+ D
Sbjct: 442 LEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGD 501
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP EI L L +K +GY PN S
Sbjct: 502 VSHPKINEIKKELNDLLERLKGIGYQPNLS 531
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 196/372 (52%), Gaps = 11/372 (2%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
S F+ L +C + + ++HA+ ++ F+S++++ N +ID+Y KCG L AR VF
Sbjct: 109 SFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVF 168
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M ++V +W +I + G + A LF +P +D +W +MV+G+AQ+ +AL
Sbjct: 169 DEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALE 228
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVYMGSALIDM 195
F ++ E + E + +SACA K + + S + +V +GSALIDM
Sbjct: 229 VFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDM 288
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG V A VF GMRERN+ S++S+I + +G A A+++F M+ +G++P+ VT
Sbjct: 289 YSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTF 348
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V++AC+ +G Q+ A + +C + L + D+ ++ G L +A + + MP
Sbjct: 349 VGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMP 408
Query: 316 IRN------VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+ + + S V G + + S RL ++ N+ ++ L Y G ++
Sbjct: 409 MESDGAVWGALLGASHVHGNPDVAEIASKRLF--ELEPDNIGNYLLLSNTYASAGRWDDV 466
Query: 370 LGLFRLLKRESV 381
+ +LL+ +++
Sbjct: 467 SKVRKLLREKNL 478
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 222/481 (46%), Gaps = 91/481 (18%)
Query: 60 LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW-------GFIDDASRLFASMP 112
++ + +C L A++V ++ KN+ + ++T LL+ LF+ +
Sbjct: 11 VVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLH 70
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+ +W +++ +A S+AL ++ M + ++F + SACA +G Q
Sbjct: 71 TPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQ 130
Query: 173 VHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI------- 224
+HA L +SSD+Y+ +A+IDMY KCG + CAR VFD M ER+++SW LI
Sbjct: 131 LHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIG 190
Query: 225 ------------------------TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
T Y QN DALEVF R+ G+E DEVTL V+S
Sbjct: 191 DMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVIS 250
Query: 261 ACASLAAFKEGLQIHARLMR--CEK----LRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
ACA L A K +A +R E + +++++G+AL+DMY+KCG + EA VF M
Sbjct: 251 ACAQLGASK-----YANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGM 305
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
RNV S +SM+ G+A ++A +F MLE
Sbjct: 306 RERNVFSYSSMIVGFAIHGRARAAIKLFYDMLE--------------------------- 338
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK-HGLRFLSGEESDIFVGNSLI 433
V P H TF +L AC++ + G+Q + K +G+ ++++ +
Sbjct: 339 ----TGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGV----APTAELYA--CMT 388
Query: 434 DMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
D+ + G +E ++ ETM +E D W A++ A + +G + L +PD+
Sbjct: 389 DLLSRAGYLEKALQLVETMPMESDGAVWGALL--GASHVHGNPDVAEIASKRLFELEPDN 446
Query: 493 V 493
+
Sbjct: 447 I 447
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 49/326 (15%)
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET-------SMVSGYAKASSVKSARLM 341
VL +V + +C LN+A+ V ++ I+N+ + +V+ RL+
Sbjct: 6 VLEWEVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLL 65
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
F+++ N +W ALI Y G +AL + +++ V P +TF L +ACA +
Sbjct: 66 FSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHS 125
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD---W- 457
LG Q H + L G SD++V N++IDMY+KCGS+ +F+ M ERD W
Sbjct: 126 ALGAQLHAQTL-----LLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWT 180
Query: 458 ---------------------------VSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
V+W AM+ G AQN +AL +F+++ G +
Sbjct: 181 GLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEI 240
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEA 547
D VT++GV+ AC+ G + + +++ G + D+ + ++D+ + G ++EA
Sbjct: 241 DEVTLVGVISACAQLG-ASKYANWIRDIAESSGFG-VGDNVLVGSALIDMYSKCGNVEEA 298
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + M + + + S++ +H
Sbjct: 299 YDVFKGM-RERNVFSYSSMIVGFAIH 323
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/660 (35%), Positives = 342/660 (51%), Gaps = 80/660 (12%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V+T N+I+ G K + A LF MP RD SWN+M++G + M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
S F L Y+FGS L A + F +G QVH+++ K Y+ +VY GSAL+DMY KC ++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A F + + N VSWN++I Y Q G A + M G + D+ T A ++
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSE 322
Q+H ++++ L + NAL+ Y+KCG L++A+ +FD IR++V+
Sbjct: 212 DADFCNLTSQLHGKIIK-HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTW 270
Query: 323 TSMVSGYAKAS-------------------------SVKSA--------------RLMFT 343
S+++ Y S S+ SA L+
Sbjct: 271 NSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIK 330
Query: 344 KMLERNVVSWNALIAGYTQN--GENEEALGLFRLL------------------------- 376
+ E++V NALI+ Y ++ G +EAL +F L
Sbjct: 331 RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAV 390
Query: 377 ------KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+ ++ HY+F +L +C++LA QLG+Q H +K+GL ES+ FV +
Sbjct: 391 KSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGL------ESNEFVSS 444
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY KCG +ED R FE + ++WNA++ G AQ+G AL LF M K
Sbjct: 445 SLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKM 504
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
DH+T + VL ACSH GLVE+G K+ M ++G+ P +HY C VDL GR+G L+EAK L
Sbjct: 505 DHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKAL 564
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MP +PD +W + L AC+ NI L VA LLE+EP YVLLSNMY L RW
Sbjct: 565 IEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRW 624
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E +V++LM++RGV K PG SWIE+ +V+ F+ +D HP ++IY +L++L E+ R+
Sbjct: 625 DEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITRM 684
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 208/465 (44%), Gaps = 84/465 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D +A LL + + T ++H +IIK + N LI Y+KCG L A+++
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257
Query: 77 FDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FD + +++ TWNS++ L D A +L M E
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH--------------------- 296
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F YS+ S +SAC G +H L+ K + V + +ALI M
Sbjct: 297 ----------GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISM 346
Query: 196 YGKC--GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G + A +F+ + ++ VSWNS++T Q G + DA++ F+ M ++ ++ D
Sbjct: 347 YLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHY 406
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+ ++V+ +C+ LA F+ G QIH ++ N+ V ++L+ MY+KCG + +AR F+
Sbjct: 407 SFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFV-SSSLIFMYSKCGIIEDARRSFEE 465
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+K SS ++WNAL+ GY Q+G+ AL LF
Sbjct: 466 A---------------SKNSS----------------ITWNALMFGYAQHGQCNVALDLF 494
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL- 432
L++ + V H TF +L AC +H +V+ G +FL ESD V +
Sbjct: 495 FLMEXKKVKMDHITFVAVLTAC-----------SHIGLVEQGCKFLRCMESDYGVPPRME 543
Query: 433 -----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+D+Y + G +E+ + E M + D W + C G
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 206/473 (43%), Gaps = 82/473 (17%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H+L K +DVY + +++ Y KC + A +FD M R+ VSWN++I + G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+ +V M + G E D T S++ A F G Q+H+ +++ N + G+A
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAEN-VYAGSA 139
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM------------ 341
L+DMYAKC KL +A F + N VS +M++GYA+A ++A +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 342 ------------------FTKMLERNVVSW---------NALIAGYTQNGENEEA----- 369
T L ++ NALI Y++ G ++A
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 370 --------------LGLFRLLKRESVC-------------PTHYTFGNLLNACANLADLQ 402
L + L +E + P Y++ ++++AC N
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC--GSVEDGCRIFETMVERDWVSW 460
GR H V+K G E + + N+LI MY+K GS+++ IFE++ +D VSW
Sbjct: 320 NGRSLHGLVIKRGF------EQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSW 373
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+++ G +Q G +A+ F M DH + VL +CS + G++ ++
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQ-IHVLAL 432
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++GL + + ++ + + G +++A+ E + ++ W +L+ H
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KNSSITWNALMFGYAQH 484
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 37/239 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L SC + +++H +K S F+ + LI +Y+KCG + AR+
Sbjct: 403 IDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRS 462
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ S + TWN+++ G+AQH + + AL
Sbjct: 463 FEEASKNSSITWNALMF-------------------------------GYAQHGQCNVAL 491
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALID 194
F M + + +F + L+AC+ + G + + +S Y M + +D
Sbjct: 492 DLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCM-ESDYGVPPRMEHYACAVD 550
Query: 195 MYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+YG+ GR+ A+ + + M + + W + + G A +V ++ +EP+E
Sbjct: 551 LYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLE--MEPEE 607
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++ H L G +D++ N++++ Y KC + +F+ M RD VSWN MI G
Sbjct: 18 LLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINC 77
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
G + + + M CG + D T +L + AG+ G++ S + K
Sbjct: 78 GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIK 127
>gi|242055533|ref|XP_002456912.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
gi|241928887|gb|EES02032.1| hypothetical protein SORBIDRAFT_03g045330 [Sorghum bicolor]
Length = 648
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/569 (36%), Positives = 309/569 (54%), Gaps = 43/569 (7%)
Query: 112 PERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVD---FK 168
P S+ + +SG AQH R +AL F M ++++F SA A A +
Sbjct: 76 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRCAAA 135
Query: 169 MGTQVHALLSKSRY-SSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
+G QVHAL + Y D ++ A +DMY K GR++ ARR+FD M RN+V+WN+++T
Sbjct: 136 VGPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMTNA 195
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+G + +E + + +G P+ V++ + +ACA + G Q H
Sbjct: 196 VLDGRPIETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTCLSLGEQFHG----------- 244
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
AKCG FD+ +V SMV Y K + ARL+F M
Sbjct: 245 ---------FVAKCG--------FDK----DVSVSNSMVDFYGKCRCMGKARLVFDGMGV 283
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
RN VSW +++ Y QNG EEA ++ +R PT + +LL CA L L LGR
Sbjct: 284 RNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRAL 343
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H + + +++IFV ++L+DMY KCG ++D ++F M +R+ V+WNAMI G
Sbjct: 344 HAVAARSCI------DANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGY 397
Query: 468 AQNGYGTEALGLFKKMLLCGEK-PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A G AL +F +M++ E P+++T++ VL ACS GL +EG + F +M + G+ P
Sbjct: 398 AHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTACSRGGLTKEGYELFQTMKQRFGIEP 457
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+HY C+VDLLGRAG ++A +I+ MPM+P +WG+LL CK+H LG A+KL
Sbjct: 458 RIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSISVWGALLGGCKMHGKTELGRVAAEKL 517
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
E++P +SG +VLLSNM A GRW E VRK M+ G+ K PG SWI V+VF K
Sbjct: 518 FELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNIVHVFQAK 577
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
D H +N EI +L L +M+ GY+P+
Sbjct: 578 DTTHEMNSEIQALLAKLKGQMQGAGYMPD 606
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 199/434 (45%), Gaps = 69/434 (15%)
Query: 40 RVHARIIKSQF-ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+VHA ++ + + F+ +D+Y K G L AR++FD+M N+NV WN+++T
Sbjct: 139 QVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMPNRNVVAWNAVMT----- 193
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
N+++ G R E + + + + S +
Sbjct: 194 ---------------------NAVLDG-----RPIETVEAYFGLRGAGGMPNVVSVCAFF 227
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
+ACAG +G Q H ++K + DV + ++++D YGKC + AR VFDGM RN V
Sbjct: 228 NACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRNSV 287
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S++ Y QNG +A V++ +G EP + ++S+++ CA L G +HA
Sbjct: 288 SWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLDLGRALHAVA 347
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
R + ++ + +ALVDMY KCG + +A VF MP RN+V+ +M+ GYA +A
Sbjct: 348 AR-SCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAWNA 406
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+F +M ++ RE+ P + T N+L AC+
Sbjct: 407 LAVFDEM-----------------------------IMGRETA-PNYITIVNVLTACSRG 436
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
L ++ + RF G E I ++D+ + G E I + M R +
Sbjct: 437 G---LTKEGYELFQTMKQRF--GIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSI 491
Query: 459 S-WNAMIVGCAQNG 471
S W A++ GC +G
Sbjct: 492 SVWGALLGGCKMHG 505
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 32/298 (10%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
++C +S + H + K F ++ + N ++D Y KC C+ AR VFD M +N
Sbjct: 226 FFNACAGMTCLSLGEQFHGFVAKCGFDKDVSVSNSMVDFYGKCRCMGKARLVFDGMGVRN 285
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
SW SMV +AQ+ EA ++
Sbjct: 286 -------------------------------SVSWCSMVVAYAQNGAEEEAFLVYLGARR 314
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+++ S L+ CAG + +G +HA+ ++S +++++ SAL+DMYGKCG +
Sbjct: 315 AGEEPTDFMVSSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQD 374
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSACA 263
A +VF M +RN+V+WN++I Y G A +AL VF M M P+ +T+ +V++AC+
Sbjct: 375 AEQVFFEMPQRNLVTWNAMIGGYAHIGDAWNALAVFDEMIMGRETAPNYITIVNVLTACS 434
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
KEG ++ + + + + +VD+ + G +A + MP+R +S
Sbjct: 435 RGGLTKEGYELFQTMKQRFGIEPRIEHYACVVDLLGRAGMEEQAYEIIQGMPMRPSIS 492
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 179/418 (42%), Gaps = 43/418 (10%)
Query: 154 FGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
A+ A S ++G HA L + ++ + L+++Y K A
Sbjct: 16 LAGAVEAAIASRSPRLGRAAHARALRLLAPALPPFICAHLVNLYSKLDLPGAAAAALAAD 75
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA---AFK 269
+VS+ + I+ Q+ AL F M+ G+ P++ T S A AS A
Sbjct: 76 PSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRCAAA 135
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G Q+HA +R L +D + A +DMY K G+L AR +FD MP
Sbjct: 136 VGPQVHALALRFGYLPDDAFVSCAALDMYFKTGRLALARRLFDEMP-------------- 181
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
RNVV+WNA++ +G E + + L+ P +
Sbjct: 182 -----------------NRNVVAWNAVMTNAVLDGRPIETVEAYFGLRGAGGMPNVVSVC 224
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
NACA + L LG Q H V K G + D+ V NS++D Y KC + +F
Sbjct: 225 AFFNACAGMTCLSLGEQFHGFVAKCGF------DKDVSVSNSMVDFYGKCRCMGKARLVF 278
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ M R+ VSW +M+V AQNG EA ++ GE+P + +L C+ ++
Sbjct: 279 DGMGVRNSVSWCSMVVAYAQNGAEEEAFLVYLGARRAGEEPTDFMVSSLLTTCAGLLGLD 338
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
GR + ++ A + + +VD+ G+ G + +A+ + MP Q + V W +++
Sbjct: 339 LGRALHAVAARSCIDANIFVA-SALVDMYGKCGGIQDAEQVFFEMP-QRNLVTWNAMI 394
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ LL +C + R +HA +S + IF+ + L+D+Y KCG + A +VF +M
Sbjct: 325 SSLLTTCAGLLGLDLGRALHAVAARSCIDANIFVASALVDMYGKCGGIQDAEQVFFEMPQ 384
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
+N+ TWN++I G + I DA WN AL F +M
Sbjct: 385 RNLVTWNAMIGG---YAHIGDA--------------WN--------------ALAVFDEM 413
Query: 143 -HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD--VYMGSALIDMYGKC 199
A + + + L+AC+ K G ++ + K R+ + + + ++D+ G+
Sbjct: 414 IMGRETAPNYITIVNVLTACSRGGLTKEGYELFQTM-KQRFGIEPRIEHYACVVDLLGRA 472
Query: 200 GRVSCARRVFDGMRERNIVS-WNSLITCYEQNG 231
G A + GM R +S W +L+ + +G
Sbjct: 473 GMEEQAYEIIQGMPMRPSISVWGALLGGCKMHG 505
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 326/621 (52%), Gaps = 67/621 (10%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASM-----PERDQCSWNSMVSGFAQHDRFSEALGYFV 140
F +N++++ + G +DDA LF S+ P +WN+MVS Q R EA+
Sbjct: 199 FAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLY 258
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKC 199
M + +F SAL AC+ +G ++HA +L + +++ ++ SAL+DMY
Sbjct: 259 DMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASH 318
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLA 256
RV AR VFD + ER + WN++I Y Q G DALE+F RM +G+ P E T+A
Sbjct: 319 ERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIA 378
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V+ +CA F +H +++ N V NAL+D+YA+ G ++
Sbjct: 379 GVLPSCARSETFAGKEAVHGYVVKRGMADNPFV-QNALMDLYARLGDMD----------- 426
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+AR +F + R+VVSWN LI G G +A L R +
Sbjct: 427 --------------------AARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREM 466
Query: 377 KR------------------ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
++ E V P + T LL CA LA G++ H + V+H L
Sbjct: 467 QQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHAL-- 524
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+SD+ VG++L+DMY KCG + +F+ + R+ ++WN +I+ +G G EA+
Sbjct: 525 ----DSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIA 580
Query: 479 LFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF +M+ E KP+ VT I L ACSH+G+V+ G + F SM + HG+ P D + C VD+
Sbjct: 581 LFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDI 640
Query: 538 LGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
LGRAG LDEA +I +M P + W S L AC++HRN+ LGE A++L E+EP +
Sbjct: 641 LGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASH 700
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
YVLL N+Y+ G W + VR MR+RGV K+PGCSWIE+ G ++ FM + HP + +
Sbjct: 701 YVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLV 760
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
+ + L M+ GY P+ +
Sbjct: 761 HAHMDALWERMRDQGYTPDTT 781
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 248/533 (46%), Gaps = 68/533 (12%)
Query: 70 LYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
++GA D + N+++T + G + A LF +MP RD ++NS+++
Sbjct: 79 IHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLF 138
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAG-SVDFKMGTQVHALLSKSRY--SSDV 186
R+ AL M E L+ ++ S L AC+ + D ++G + HA K+ + +
Sbjct: 139 RRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDER 198
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERN-----IVSWNSLITCYEQNGPASDALEVFV 241
+ +AL+ MY + G V A+ +F + + +V+WN++++ Q+G +A+EV
Sbjct: 199 FAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLY 258
Query: 242 RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC 301
M+A G+ PD VT AS + AC+ L G ++HA +++ L + + +ALVDMYA
Sbjct: 259 DMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASH 318
Query: 302 GKLNEARCVFDRMPI--RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
++ AR VFD +P R + +M+ GYA+A
Sbjct: 319 ERVGAARLVFDMVPAGERQLGLWNAMICGYAQA--------------------------- 351
Query: 360 YTQNGENEEALGLFRLLKRES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G +E+AL LF ++ E+ V P+ T +L +CA H +VVK G+
Sbjct: 352 ----GLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGM-- 405
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ FV N+L+D+Y + G ++ IF T+ RD VSWN +I GC G+ +A
Sbjct: 406 ----ADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ 461
Query: 479 LFKKMLLCGE------------------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
L ++M G P+++T++ +L C+ G K +
Sbjct: 462 LVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARG-KEIHGYAV 520
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H L + +VD+ + GCL ++ + + +P + + + W L+ A +H
Sbjct: 521 RHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRR-NVITWNVLIMAYGMH 572
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 150/542 (27%), Positives = 235/542 (43%), Gaps = 111/542 (20%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIK-SQFASEIFIQNRLIDVYAKCGCLYGARKV 76
D FA L +C + + +S R +HA ++K + A+ F+ + L+D+YA + AR V
Sbjct: 268 DGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLV 327
Query: 77 FDKMS--NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
FD + + + WN++I G + G +DA LFA M +E
Sbjct: 328 FDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARME--------------------TE 367
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
A SE + L +CA S F VH + K + + ++ +AL+D
Sbjct: 368 A----------GVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMD 417
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG------- 247
+Y + G + AR +F + R++VSWN+LIT G DA ++ M G
Sbjct: 418 LYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAAT 477
Query: 248 -----------IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+ P+ +TL +++ CA LAA G +IH +R L +D+ +G+ALVD
Sbjct: 478 EDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVR-HALDSDVAVGSALVD 536
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MYAKCG L +R VFDR+P RN V++WN L
Sbjct: 537 MYAKCGCLALSRAVFDRLPRRN-------------------------------VITWNVL 565
Query: 357 IAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
I Y +G +EA+ LF R++ + P TF L AC +H+ +V G
Sbjct: 566 IMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAAC-----------SHSGMVDRG 614
Query: 416 LRFL------SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGC 467
L G E + +D+ + G +++ RI +M E+ +W++ + C
Sbjct: 615 LEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGAC 674
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC-SHAGLVEEGRKYFSSM-----SKE 521
+ ALG L +PD + +LC S AGL E+ + S M SKE
Sbjct: 675 --RLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKE 732
Query: 522 HG 523
G
Sbjct: 733 PG 734
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 51/294 (17%)
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ A L L R H ++H L L G V N+L+ Y +CG + +F+ M
Sbjct: 65 KSAAALRSLTAVRSIHGAALRHDL--LDGPTP--AVSNALLTAYARCGDLTAALALFDAM 120
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
RD V++N++I AL + MLL G T++ VL ACSH L E+ R
Sbjct: 121 PSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSH--LAEDLR 178
Query: 513 --KYFSSMSKEHGLAPLKDHYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ + + ++G + + ++ + R G +D+A+TL +GS+ A
Sbjct: 179 LGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTL------------FGSVGA 226
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
++ G V + + ++ + GR GE + V M RGV
Sbjct: 227 T-----DVPGGGVVT-------------WNTMVSLLVQSGRCGEAIEVLYDMVARGVRPD 268
Query: 629 --------PGCSWIEILG---HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG 671
P CS +E+L ++ +++KD N + L + +RVG
Sbjct: 269 GVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVG 322
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/661 (35%), Positives = 357/661 (54%), Gaps = 41/661 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA---KCGCLYGARKVF 77
P LL C K +SD ++HAR++ + F F+ ++I ++ + AR +F
Sbjct: 17 PTLVLLKKC---KRLSDINQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIF 73
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + F ++ K F+ WN+++ ++ EA+
Sbjct: 74 FR---HHAFEFDEKEEEEEKDPFL-----------------WNAIIKTYSHGHDPKEAM- 112
Query: 138 YFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ V + EN A ++ ++ L AC+ K G Q+H LL K + SD+++ + LI Y
Sbjct: 113 WLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFY 172
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A +VFD M +R+ VS+NS+I Y + G A VF I +E L
Sbjct: 173 VKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVF-----DCIPLEERNLI 227
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S S A ++G+ + +L + DL+ N+++D KCG++ +A+ +FDRMP
Sbjct: 228 SWNSLIRGYAQSEDGILVAWQLF-AKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMPN 286
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
R++VS +M+ GYAK V AR +F +M ER+VV++NA++ GY QNG EALG+F +
Sbjct: 287 RDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGM 346
Query: 377 KRE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + + + T L+A A L + G H + + G D +G +LIDM
Sbjct: 347 QSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSL------DGRLGVALIDM 400
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+E+ +FE + E+ WNA+I G A +G G A +M +PD +T
Sbjct: 401 YSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITF 460
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IG+L AC HAGLV+EG F M + H + P HY CMVD+LGRAG ++EAK +E MP
Sbjct: 461 IGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMP 520
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+P+ VIW SLL+ACK H + +G+ VA+ L+ ++ + YVL SNMYA LG+W +V +
Sbjct: 521 FEPNDVIWRSLLSACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRK 580
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
VR +M+++ + K PGCSWIE+ GHV F V+DK HP IY +L L+ Y N
Sbjct: 581 VRAMMKQKNLKKIPGCSWIELEGHVYAFFVQDKSHPQFSGIYSILDSLSMTDSEHSYCKN 640
Query: 676 A 676
Sbjct: 641 V 641
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 218/466 (46%), Gaps = 66/466 (14%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
AF D + +L +C R V + ++H + K +F S++F+QN LI Y KCGCL A
Sbjct: 123 AFADKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRAS 182
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQ-HDR 131
+VFD+M ++ ++NS+I G +K G ID A +F +P ER+ SWNS++ G+AQ D
Sbjct: 183 QVFDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDG 242
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMG 189
A F KM + S+ S + C G ++ G L + D+
Sbjct: 243 ILVAWQLFAKMPERDLI----SWNSMIDGCVKCGRMEDAQG------LFDRMPNRDIVSW 292
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-I 248
+ +ID Y K GRV AR +FD M ER++V++N+++ Y QNG +AL +F M + G
Sbjct: 293 ANMIDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNF 352
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
D TL +SA A L +G+ IH R + D LG AL+DMY+KCG + A
Sbjct: 353 LLDNATLLIALSAIAQLGHIDKGVAIH-RFIEEIGFSLDGRLGVALIDMYSKCGSIENAM 411
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
VF+ + E++V WNA+I G +G E
Sbjct: 412 MVFENIK-------------------------------EKSVDHWNAIIGGLAIHGLGEL 440
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG------LRFLSGE 422
A ++R V P TF LLNAC H +VK G +R +
Sbjct: 441 AFDFLMEMERMRVEPDDITFIGLLNAC-----------GHAGLVKEGMMCFELMRRVHKV 489
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
E + ++D+ + G +E+ E M E + V W +++ C
Sbjct: 490 EPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLSAC 535
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 327/618 (52%), Gaps = 69/618 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+K L +C + + + +++H +++K + + L+D+YAKCG
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCG--------- 190
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I A ++F + R+ W SM++G+ ++D E L
Sbjct: 191 ----------------------EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N +EY++G+ + AC G H L KS + ++L+DMY
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S ARRVF+ ++V W ++I Y NG ++AL +F +M I+P+ VT+AS
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C + + G +H ++ D + NALV MYAKC + +A+ V
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIW--DTNVANALVHMYAKCYQNRDAKYV------- 399
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
F E+++V+WN++I+G++QNG EAL LF +
Sbjct: 400 ------------------------FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
ESV P T +L +ACA+L L +G H + VK G FL+ S + VG +L+D Y
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG--FLA--SSSVHVGTALLDFYA 491
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + IF+T+ E++ ++W+AMI G + G +L LF++ML +KP+ T
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC H G+V EG+KYFSSM K++ P HYTCMVD+L RAG L++A +IE MP+Q
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD +G+ L C +H LGE V KK+L++ P ++ YVL+SN+YA GRW + VR
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 618 KLMRKRGVVKQPGCSWIE 635
LM++RG+ K G S +E
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 204/435 (46%), Gaps = 61/435 (14%)
Query: 149 LSEYSFGSALSACAGSVDFKMGT---------QVHALLSKSRYSSDVYMGSALIDMYGKC 199
L+E + GS+L A S F + + Q H +L+ + D+ + + L+ +YG
Sbjct: 30 LTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFF 89
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G AR VFD + E + W ++ CY N + + ++++ +M G D++ + +
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC L G +IH +L++ N ++ G L+DMYAKCG++ A VF+ + +RNV
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V TSM++GY K + ++F +M E NV+ NE
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-------------NE------------ 242
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
YT+G L+ AC L+ L G+ H +VK G+ E S V SL+DMY+KC
Sbjct: 243 ------YTYGTLIMACTKLSALHQGKWFHGCLVKSGI-----ELSSCLV-TSLLDMYVKC 290
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + + R+F D V W AMIVG NG EAL LF+KM KP+ VT+ VL
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPL-----KDHYTCMVDLLGRAGCLDEAKTLIEAM 554
C +E GR HGL+ + +V + + +AK + E M
Sbjct: 351 SGCGLIENLELGRSV-------HGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-M 402
Query: 555 PMQPDAVIWGSLLAA 569
+ D V W S+++
Sbjct: 403 ESEKDIVAWNSIISG 417
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/686 (31%), Positives = 358/686 (52%), Gaps = 43/686 (6%)
Query: 4 QRSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDV 63
QR+++ ++ A +D + L+ R + ++HARI+ + F+ ++LI
Sbjct: 8 QRALQGLLNKAA-VDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISF 66
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSW---N 120
Y + A VFD+++ +N F++N+++ DA LF SW +
Sbjct: 67 YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--------LSWIGSS 118
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGT---QVHALL 177
S A+ D S L A +G DF +G+ QVH +
Sbjct: 119 CYSSDAARPDSIS--------------------ISCVLKALSGCDDFWLGSLARQVHGFV 158
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ + SDV++G+ +I Y KC + AR+VFD M ER++VSWNS+I+ Y Q+G D
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 238 EVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
+++ M+A S +P+ VT+ SV AC + GL++H +++ ++ DL L NA++
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAVIG 277
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
YAKCG L+ AR +FD M ++ V+ +++SGY VK A +F++M + +WNA+
Sbjct: 278 FYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+G QN +EE + FR + R P T +LL + ++L+ G++ H +++G
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG- 396
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEA 476
+++I+V S+ID Y K G + R+F+ +R ++W A+I A +G A
Sbjct: 397 -----ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Query: 477 LGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVD 536
LF +M G KPD VT+ VL A +H+G + + F SM ++ + P +HY CMV
Sbjct: 452 CSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 537 LLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
+L RAG L +A I MP+ P A +WG+LL V ++ + + +L E+EP N+G
Sbjct: 512 VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGN 571
Query: 597 YVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEI 656
Y +++N+Y + GRW E VR M++ G+ K PG SWIE + F+ KD +KE+
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEM 631
Query: 657 YLVLKMLTREMKRVGYVPNASDDEAY 682
Y +++ L M Y+ DEAY
Sbjct: 632 YEIIEGLVESMSDKEYIRKQELDEAY 657
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 329/596 (55%), Gaps = 46/596 (7%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARII-KSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F ++ +C ++ ++ A + + S++ + N L+++Y+KCG L A V
Sbjct: 107 DSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMV 166
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ M RD SWN+++S A+HDR A+
Sbjct: 167 FER-------------------------------MKIRDVVSWNAIISALARHDRKDIAM 195
Query: 137 GYFVKMHSENFALSE-------YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
F +M E + E ++ SAL+AC G + G ++HAL+ + S++ +G
Sbjct: 196 QRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVG 255
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+AL+ MY CG + A F M +RN+VSWN++I Y + +A +F +M G++
Sbjct: 256 NALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQ 315
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P+ VT + +SAC++ AAF++GLQ+H+ ++R L D +GNA+V M+AKC L++A
Sbjct: 316 PNSVTFVTFLSACSTPAAFEDGLQLHS-IVRESGLEADASVGNAVVHMFAKCWSLDDALA 374
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
F R+P +N+ S ++ Y + AR +F M ER+V++WN ++ Y + +EA
Sbjct: 375 AFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEA 434
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+ LFR + E T+ +L ACA A L GR+ H + G R G +S++FVG
Sbjct: 435 VRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELI---GER---GADSELFVG 488
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+DM+ KC S+ + FE + +D SWN ++ AQNG EAL F +M G K
Sbjct: 489 NALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIK 548
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P VT I V ACSHAG +E+ + F+S+ ++G+APL HY+ M DLLGRAG LDEA+
Sbjct: 549 PTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEE 608
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+I+ +P D + W +LL+ACKVH ++ G VA ++L P +S V LSN++A
Sbjct: 609 VIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAARVALSNIFA 664
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 252/496 (50%), Gaps = 55/496 (11%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
SF +AL +C G +H L+ +S + + +G+AL++MYGKCG ++ AR VFDGM
Sbjct: 8 SFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGM 67
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEG 271
R+++SWN++IT Y Q G +A+E+F M G IEPD VT +VVSAC +A + G
Sbjct: 68 DHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAG 127
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
+I A + L +D+VLGNALV+MY+KCG L A VF+RM IR+V
Sbjct: 128 DKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDV------------ 175
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL-------KRESVCPT 384
VSWNA+I+ ++ + A+ FR + K E++ P
Sbjct: 176 -------------------VSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPD 216
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+T + L AC L+ GR+ H V++ G ES++ VGN+L+ MY CG+++D
Sbjct: 217 GFTLASALAACTGPEMLEEGREIHALVIERGC------ESELVVGNALVSMYANCGTLQD 270
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
F+ M +R+ VSWNAMI + EA +F +M L G +P+ VT + L ACS
Sbjct: 271 ALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACST 330
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
E+G + S+ +E GL +V + + LD+A + +P Q + W
Sbjct: 331 PAAFEDGLQ-LHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIP-QKNLGSWN 388
Query: 565 SLLAACKVHRNIMLGEYV-AKKLLEI-EPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
LL A I +G A+KL E+ E + + ++ Y E E VR+ + M
Sbjct: 389 GLLGA-----YIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIA 443
Query: 623 RGVVKQPGCSWIEILG 638
G K +W +LG
Sbjct: 444 EG-TKSNSITWTTMLG 458
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 291/620 (46%), Gaps = 116/620 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F L SC+R +S++ + +H +I+S ++I + N L+++Y KCG L AR+VF
Sbjct: 5 DNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVF 64
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M +++V +WN++IT + G +A LF +M E + +S+
Sbjct: 65 DGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSV--------------- 109
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL-SKSRYSSDVYMGSALIDMY 196
+F + +SAC + G ++ AL+ + SDV +G+AL++MY
Sbjct: 110 ---------------TFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMY 154
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE---- 252
KCG + A VF+ M+ R++VSWN++I+ ++ A++ F M G+ P E
Sbjct: 155 SKCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALL 214
Query: 253 ---VTLASVVSACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEA 307
TLAS ++AC +EG +IHA ++ CE ++LV+GNALV MYA CG L +A
Sbjct: 215 PDGFTLASALAACTGPEMLEEGREIHALVIERGCE---SELVVGNALVSMYANCGTLQDA 271
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
F +M RNVVS +M IA Y + ++
Sbjct: 272 LECFQKMAQRNVVSWNAM-------------------------------IAAYVHHNCDK 300
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA +F ++ E V P TF L+AC+ A + G Q H+ V + GL E+D
Sbjct: 301 EAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGL------EADAS 354
Query: 428 VGNSLIDMYMKCGSVEDGC-------------------------------RIFETMVERD 456
VGN+++ M+ KC S++D ++FE M ERD
Sbjct: 355 VGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERD 414
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
++WN ++ + EA+ LF++M+ G K + +T +L AC+ L+ EGR+
Sbjct: 415 VITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRR-IH 473
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
+ E G +VD+ G+ L A+ E + + DA W L+AA + +
Sbjct: 474 ELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGK-DASSWNVLVAALAQNGD- 531
Query: 577 MLGEYVAKKLLEIEPSNSGP 596
E K+ L+++ P
Sbjct: 532 --AEEALKQFLQMQREGIKP 549
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 60/107 (56%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R ++++ + +S + +L +C +++ RR+H I + SE+F+ N L+D++
Sbjct: 436 RLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMF 495
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
KC L GAR+ F+++ K+ +WN ++ L + G ++A + F M
Sbjct: 496 GKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQM 542
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/709 (31%), Positives = 356/709 (50%), Gaps = 107/709 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C +S +VH R+IK F S+ ++ L+ +Y + CL
Sbjct: 103 FPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCL----------- 151
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DDA + F +MP RD +W+S+V F Q+ + SE L F +
Sbjct: 152 --------------------DDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQ 191
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE + S AC+ ++G VH + + S+ + ++LI MYGK G
Sbjct: 192 MISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A R+F+ + R W +I+CY Q+G +AL VF +M +EP++VT+ V+ A
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCA 311
Query: 262 CASLAAFKEGLQIHARLMR--------------------------CEK----LRNDLVLG 291
CA L KEG +H ++R C K ++ +L
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 292 -NALVDMYAKCGKLNEARCVFDRMPIRNVVS----------------------------- 321
N L+ ++ + G+ EA +F +M + ++
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 322 ---------ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ +++ YAK V SA MF K+ E+++V+WN++I G++QNG + EA+ L
Sbjct: 432 KTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITL 491
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + V TF +++ AC++L L+ G+ H ++ +GLR D ++ +L
Sbjct: 492 FDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR------KDSYLDTAL 545
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
DMY KCG ++ +F+ M ER VSW+ MI G +G + LF +ML G KP+
Sbjct: 546 TDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPND 605
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
+T + +L ACSHAG VEEG+ YF+SMS E G+ P DH+ CMVDLL RAG L+ A +I
Sbjct: 606 ITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIIT 664
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
++P ++ IWG+LL C++H+ I + + + K LL+++ +++G Y LLSN+YAE G W +
Sbjct: 665 SLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDK 724
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLK 661
+VR +M+ +G+ K PG S IEI + F D H K+IY L+
Sbjct: 725 FGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLE 773
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 251/546 (45%), Gaps = 73/546 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L C S +++ ++HA + + +LI+ YA+ G +++VFD
Sbjct: 4 YMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+ F W +I + GF ++A L+ M +DQ
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQ----------------------- 97
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+S + F S L AC+G D +G +VH + K + SD + ++L+ MYG+
Sbjct: 98 -------ISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSC 150
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A + FD M R++V+W+S++ + QNG AS+ L++F +M++ +EPD VT+ SV A
Sbjct: 151 LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEA 210
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C+ L + + G +H ++R E + ++ L N+L+ MY K G L A +F+ +P R
Sbjct: 211 CSELGSLRLGRSVHGYVVRRE-IESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAP 269
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
T M+S Y Q+G +EAL +F ++ +
Sbjct: 270 WTPMISCY-------------------------------NQSGCFQEALNVFAKMQEFKM 298
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +L ACA L ++ GR H V++ + E D F+G +L+++Y G+
Sbjct: 299 EPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAM----DPELD-FLGPALMELYADTGN 353
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ D ++FET+ E+ +SWN +I +NG EAL LF +M G PD ++ L A
Sbjct: 354 LRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSA 413
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C + G + + K + ++D+ + G + A + E + + V
Sbjct: 414 CGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIK-EKSLV 470
Query: 562 IWGSLL 567
W S++
Sbjct: 471 TWNSMI 476
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F ++ +C + + VH ++I + ++ L D+Y+KCG L A V
Sbjct: 502 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGV 561
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
FD+MS +++ +W+ +I G G I+ LF M
Sbjct: 562 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM 596
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/663 (32%), Positives = 352/663 (53%), Gaps = 74/663 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQ-NRLIDVYAKCGCLYGARK 75
++S +L C ++ R +HA ++K +E IQ N L+ +YA+CG
Sbjct: 263 MNSYTTVGVLQVCAELAQLNHGRELHAALLKC--GTEFNIQCNALLVMYARCG------- 313
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++D A R+F + ++D SWNSM+S + Q+ ++EA
Sbjct: 314 ------------------------WVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEA 349
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ +F +M F S LSA G +VHA K R SD+ + + L+DM
Sbjct: 350 IDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDM 409
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KC V C+ RVFD MR ++ VSW ++I CY Q+ S+A+ F GI+ D + +
Sbjct: 410 YIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMM 469
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++ AC+ L + Q+H+ +R L DL+L N ++D+Y +CG++ A +F+ +
Sbjct: 470 GSILEACSGLKSISLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGEVCYALNIFEMLD 527
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++++V+W +++ + +NG EA+ LF
Sbjct: 528 -------------------------------KKDIVTWTSMVNCFAENGLLHEAVALFGK 556
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + P +L A A L+ L G++ H +++ G + G V +SL+DM
Sbjct: 557 MLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR-GKFPVEGA-----VVSSLVDM 610
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y CGS+ ++F+ +D V W AMI +G+G +A+ +FK+ML G PDHV+
Sbjct: 611 YSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSF 670
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ +L ACSH+ LV+EG+ Y M ++ L P ++HY C+VDLLGR+G +EA I++MP
Sbjct: 671 LALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMP 730
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++P +V+W +LL AC++H+N L KLLE+EP N G YVL+SN++AE+G+W V
Sbjct: 731 LEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKE 790
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVG-YVP 674
+R M ++G+ K P CSWIEI V+ F +D H ++ I+L L +T +++R G YV
Sbjct: 791 IRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVE 850
Query: 675 NAS 677
+ S
Sbjct: 851 DTS 853
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/587 (28%), Positives = 286/587 (48%), Gaps = 78/587 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C VH +KS + N L+ +YAKCG L A +VF
Sbjct: 162 DGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVF 221
Query: 78 DKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+ M + ++V +WNS I+G C N M F EAL
Sbjct: 222 EWMRDGRDVASWNSAISG----------------------CVQNGM---------FLEAL 250
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M S+ F+++ Y+ L CA G ++HA L K ++ +AL+ MY
Sbjct: 251 DLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMY 309
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG V A RVF + +++ +SWNS+++CY QN ++A++ F M+ +G PD +
Sbjct: 310 ARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIV 369
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
S++SA L G ++HA ++ ++L +DL + N L+DMY KC + + VFDRM I
Sbjct: 370 SLLSAVGHLGRLINGREVHAYAVK-QRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRI 428
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
++ VS T+ +IA Y Q+ EA+G FR
Sbjct: 429 KDHVSWTT-------------------------------IIACYAQSSRYSEAIGKFRTA 457
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
++E + G++L AC+ L + L +Q H++ +++GL D+ + N +ID+Y
Sbjct: 458 QKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-------DLILKNRIIDIY 510
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
+CG V IFE + ++D V+W +M+ A+NG EA+ LF KML G +PD V ++
Sbjct: 511 GECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALV 570
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH-YTCMVDLLGRAGCLDEAKTLIEAMP 555
G+L A + + +G++ + + G P++ + +VD+ G ++ A + +
Sbjct: 571 GILGAIAGLSSLTKGKEIHGFLIR--GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAK 628
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE--IEPSNSGPYVLL 600
+ D V+W +++ A +H + Y+ K++LE + P + LL
Sbjct: 629 CK-DVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 256/562 (45%), Gaps = 97/562 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEI---FIQNRLIDVYAKCGCLYGARKVFD 78
+ +LD ++VS+ R++HA + + + F+ +L+ +Y KCG L
Sbjct: 58 YGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRL-------- 109
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
DA RLF MP R SWN+++ EA+G
Sbjct: 110 -----------------------PDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 139 FVKMHSE----NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+ M + A + S L AC D + G++VH L KS + +AL+
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVG 206
Query: 195 MYGKCGRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
MY KCG + A RVF+ MR+ R++ SWNS I+ QNG +AL++F RM + G +
Sbjct: 207 MYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSY 266
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
T V+ CA LA G ++HA L++C N + NAL+ MYA+CG ++ A VF
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGTEFN--IQCNALLVMYARCGWVDSALRVFRE 324
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+ ++ +S WN++++ Y QN EA+ F
Sbjct: 325 IGDKDYIS-------------------------------WNSMLSCYVQNRLYAEAIDFF 353
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
+ + P H +LL+A +L L GR+ H + VK L +SD+ + N+L+
Sbjct: 354 GEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRL------DSDLQIANTLM 407
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
DMY+KC SVE R+F+ M +D VSW +I AQ+ +EA+G F+ G K D +
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA--------PLKDHYTCMVDLLGRAGCLD 545
M +L ACS G K S + + H A LK+ ++D+ G G +
Sbjct: 468 MMGSILEACS-------GLKSISLLKQVHSYAIRNGLLDLILKNR---IIDIYGECGEVC 517
Query: 546 EAKTLIEAMPMQPDAVIWGSLL 567
A + E M + D V W S++
Sbjct: 518 YALNIFE-MLDKKDIVTWTSMV 538
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 202/403 (50%), Gaps = 47/403 (11%)
Query: 172 QVHALLSKSRYSSDV-YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
HA+ + + D ++ + L+ MYGKCGR+ A R+FDGM R + SWN+LI +
Sbjct: 78 HAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSS 137
Query: 231 GPASDALEVFVRMMAS----GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
G A +A+ V+ M AS G PD TLASV+ AC + + G ++H ++ R+
Sbjct: 138 GGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRS 197
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
LV NALV MYAKCG L+ SA +F M
Sbjct: 198 TLV-ANALVGMYAKCGLLD-------------------------------SALRVFEWMR 225
Query: 347 E-RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+ R+V SWN+ I+G QNG EAL LFR ++ + YT +L CA LA L GR
Sbjct: 226 DGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGR 285
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
+ H ++K G F N+L+ MY +CG V+ R+F + ++D++SWN+M+
Sbjct: 286 ELHAALLKCGTEF-------NIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLS 338
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
QN EA+ F +M+ G PDH ++ +L A H G + GR+ + K+ +
Sbjct: 339 CYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDS 398
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
L+ T M D+ + ++ + + + M ++ D V W +++A
Sbjct: 399 DLQIANTLM-DMYIKCYSVECSARVFDRMRIK-DHVSWTTIIA 439
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 362 QNGENEEALGLF--RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
++G+ EAL R + + PT + +G +L+ A + GRQ H H V G
Sbjct: 31 KDGDLREALRQLAARSARGRAPPPTDH-YGWVLDLVAVRRAVSEGRQLHAHAVATGAL-- 87
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
G++ F+ L+ MY KCG + D R+F+ M R SWNA+I C +G EA+G+
Sbjct: 88 -GDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 480 FKKM----LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK--DHYT- 532
++ M + G PD T+ VL AC G +GR S+ HGLA D T
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEG---DGR----CGSEVHGLAVKSGLDRSTL 199
Query: 533 ---CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+V + + G LD A + E M D W S ++ C
Sbjct: 200 VANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 343/657 (52%), Gaps = 69/657 (10%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S ++V D+S + +L +C +S +++ +HA +K+ S +++ + L+D+Y
Sbjct: 95 SAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK 154
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ G ID + R+F+ MP R+ +W ++++G
Sbjct: 155 RVG-------------------------------KIDKSCRVFSEMPFRNAVTWTAIITG 183
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
R+ E L YF +M Y+F AL ACAG K G +H + + +
Sbjct: 184 LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTT 243
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+ + ++L MY +CG + +F+ M ER++VSW SLI Y++ G A+E F++M
Sbjct: 244 LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN 303
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
S + P+E T AS+ SACASL+ G Q+H ++ L + L + N+++ MY+ CG L
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL-GLNDSLSVSNSMMKMYSTCGNLV 362
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
A +F M R+++S W+ +I GY Q G
Sbjct: 363 SASVLFQGMRCRDIIS-------------------------------WSTIIGGYCQAGF 391
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
EE F +++ PT + +LL+ N+A ++ GRQ H + GL E +
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGL------EQN 445
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
V +SLI+MY KCGS+++ IF D VS AMI G A++G EA+ LF+K L
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G +PD VT I VL AC+H+G ++ G YF+ M + + + P K+HY CMVDLL RAG L
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A+ +I M + D V+W +LL ACK +I G A+++LE++P+ + V L+N+Y+
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKM 662
G E VRK M+ +GV+K+PG S I+I V+ F+ D+ HP +++IY +L++
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 213/467 (45%), Gaps = 41/467 (8%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
F NS + L+ G + A ++F MP D SW S++ + + EAL F M
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 146 NFALSEYS--FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ A+S + L AC S + G +HA K+ S VY+GS+L+DMY + G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
+ RVF M RN V+W ++IT G + L F M S D T A + ACA
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L K G IH ++ L + N+L MY +CG++ + C+F+ M R+VVS T
Sbjct: 221 GLRQVKYGKAIHTHVI-VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
S LI Y + G+ +A+ F ++ V P
Sbjct: 280 S-------------------------------LIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
TF ++ +ACA+L+ L G Q H +V+ GL + V NS++ MY CG++
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGL------NDSLSVSNSMMKMYSTCGNLV 362
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
+F+ M RD +SW+ +I G Q G+G E F M G KP + +L
Sbjct: 363 SASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSG 422
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+ ++E GR+ +++ GL + ++++ + G + EA +
Sbjct: 423 NMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 320/575 (55%), Gaps = 48/575 (8%)
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V H+ +F+ + F S +S C + K G +H+ L K+ + ++ + LID+Y KC
Sbjct: 67 VMFHTNDFSSTIEKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKC 126
Query: 200 G-------------------------------RVSCARRVFDGMRERNIVSWNSLITCYE 228
G + A ++FD M +RN+VS+NSLI+
Sbjct: 127 GCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLT 186
Query: 229 QNGPASDALEVFVRMM--ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
++ +A++ F M G+ DE TL S+VS C+ L K Q+H + R
Sbjct: 187 RHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHG-VATIVGFRT 245
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
+L+L NAL+D Y KCG+ N + C+F M ++ VS TSMV Y +AS + A +F +M
Sbjct: 246 NLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMP 305
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
+ VSW ALI+G+ +NG EAL +F + +E V P TF ++L+ACA+ A + G+Q
Sbjct: 306 VKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQ 365
Query: 407 AHTHVVKHGLRFLSGEESD----IFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWN 461
H +++ G SD ++V N+L+DMY KCG ++ +FE M+ +D VSWN
Sbjct: 366 VHCQIIR-------GRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWN 418
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
+I G AQNG G ++L +F +M+ +P+HVT +GVL AC+HAGLV G + SM +
Sbjct: 419 TLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERR 478
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP--MQPDAVIWGSLLAACKVHRNIMLG 579
+G+ P +HY ++DLLGR L+EA LIE +P + +WG++L C+VH N+ L
Sbjct: 479 YGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELA 538
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGH 639
A+ L +EP N+G YV+LSN+YA GRW + R+R +M++RG+ K+P S IE+
Sbjct: 539 RKAAEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKES 598
Query: 640 VNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+ F+ KDK HP EI L + M VGY P
Sbjct: 599 RHEFVAKDKFHPQIGEIREANSKLVQHMMDVGYQP 633
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 87/495 (17%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ L+ +C+ +KS+ + +H+++IK+ E F+ N LID+Y+KCGC K FD +
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
NK TWN++++ K G + A +LF MP+R+ S+NS++SG +H+ EA+ +F +
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 142 MHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + L E++ S +S C+ K QVH + + + +++ + +ALID YGKC
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 260
Query: 200 G-------------------------------RVSCARRVFDGMRERNIVSWNSLITCYE 228
G R+ A +VF+ M + VSW +LI+ +
Sbjct: 261 GEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFV 320
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN-- 286
+NG +ALEVF +M+ G+ P T SV+ ACAS A G Q+H +++R N
Sbjct: 321 KNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLF 380
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRM-PIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
++ + NAL+DMYAKCG + A +F+ M +++VVS ++++G+A
Sbjct: 381 NVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFA--------------- 425
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
QNG E++L +F + ++ P H TF +L+AC
Sbjct: 426 ----------------QNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSAC---------- 459
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM---VERD 456
H +V GL L E V LID+ + +E+ + E + +
Sbjct: 460 -NHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNH 518
Query: 457 WVSWNAMIVGCAQNG 471
W A++ GC +G
Sbjct: 519 IAMWGAVLGGCRVHG 533
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 163/315 (51%), Gaps = 5/315 (1%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R ++ VG L LD L+ +C +V R+VH F + + + N LID Y
Sbjct: 199 REMQNGVGGL-MLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAY 257
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
KCG + +F M K+ +W S++ + IDDA ++F MP + SW +++S
Sbjct: 258 GKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALIS 317
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
GF ++ R EAL F +M E +F S L ACA G QVH + + R S
Sbjct: 318 GFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSD 377
Query: 185 ---DVYMGSALIDMYGKCGRVSCARRVFDGM-RERNIVSWNSLITCYEQNGPASDALEVF 240
+VY+ +AL+DMY KCG + A +F+ M +++VSWN+LIT + QNG D+L VF
Sbjct: 378 NLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVF 437
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
RM+ S IEP+ VT V+SAC GL++ + R ++ L+D+ +
Sbjct: 438 DRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGR 497
Query: 301 CGKLNEARCVFDRMP 315
+L EA C+ +++P
Sbjct: 498 KNRLEEAMCLIEKVP 512
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/615 (34%), Positives = 338/615 (54%), Gaps = 53/615 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N ++T +K +D A +LF +P+R+ +W ++SGF++ F +M ++
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGAC 387
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
++Y+ S C+ ++ ++G VHA + ++ +DV +G++++D+Y KC A RV
Sbjct: 388 PNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERV 447
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVR-------------------------- 242
F+ M E ++VSWN +I+ Y + G +L++F R
Sbjct: 448 FELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQAL 507
Query: 243 -----MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
M+ G E VT + + +SL+ + G Q+H +++ R+ + ++LV+M
Sbjct: 508 EQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIR-SSLVEM 566
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KCG+++ A V +P+ + + + V+ K L+ +VSW ++
Sbjct: 567 YCKCGRMDNASIVLKDVPLDFLKNGNAGVT---------------CKELKAGIVSWGLMV 611
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+GY NG+ E+ L FRL+ RE V T +++ACAN L+ GR H H H +
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGR--HVHAYNHKI- 668
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
G D +VG+SLIDMY K GS++D IF E + V W +MI GCA +G G +A+
Sbjct: 669 ---GHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAI 725
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
LF++ML G P+ VT +GVL AC HAGL+EEG +YF M + + P +H T MVDL
Sbjct: 726 CLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDL 785
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
GRAG L E K I + +W S L++C++H+N+ +G++V++ LL++ PS+ G Y
Sbjct: 786 YGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAY 845
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSNM A RW E RVR LM +RG+ KQPG SWI++ ++ F++ D+ HP ++EIY
Sbjct: 846 VLLSNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIY 905
Query: 658 LVLKMLTREMKRVGY 672
L +L +K +GY
Sbjct: 906 SYLDILIGRLKEIGY 920
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/578 (33%), Positives = 325/578 (56%), Gaps = 44/578 (7%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+N++++GF + F E L F+ + L ++F L AC + + K+G +H+L+
Sbjct: 79 YNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVV 138
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K ++ DV ++L+ +Y GR++ A +VF+ + ER++V+W +L + Y G +A++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAID 198
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F +M+ G+ PD + V+SAC + G I + E +N V
Sbjct: 199 LFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFV--------- 249
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
T++V+ YAK ++ AR +F M E+++V+W+ +I
Sbjct: 250 -----------------------RTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQ 286
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY N +E + F + +E++ P ++ L++CA+L L LG + + +H F
Sbjct: 287 GYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH--EF 344
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
L+ ++F+ N+LIDMY KCG++ G +F+ M E+D V NA I G A+NG+ +
Sbjct: 345 LT----NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F + G PD T +G+LC C HAGL+++G ++F+++S + L +HY CMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG LD+A LI MPM+P+A++WG+LL+ C++ ++ L E V K+L+ +EP N+G YV
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LSN+Y+ GRW E VR +M ++G+ K PG SWIE+ G V+ F+ DK HPL+ +IY
Sbjct: 521 QLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYA 580
Query: 659 VLKMLTREMKRVGYVPNAS------DDEAYEEQNGSNS 690
L+ L EM+ +G+VP +DE E G +S
Sbjct: 581 KLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHS 618
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 198/458 (43%), Gaps = 81/458 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L F +L +C R+ + +H+ ++K F ++ L+ +Y+ G L
Sbjct: 109 LHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL------ 162
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
+DA ++F +PER +W ++ SG+ + EA+
Sbjct: 163 -------------------------NDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F KM Y LSAC D G + + + + ++ + L+++Y
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLY 257
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG++ AR VFD M E++IV+W+++I Y N + +E F++M+ ++PD+ ++
Sbjct: 258 AKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIV 317
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+S+CASL A G + + R E L N L + NAL+DMYAKCG + VF M
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+++V + +SG AK VK + +F + E LG
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQ----------------------TEKLG----- 409
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS----- 431
+ P TF LL C H +++ GLRF + + +
Sbjct: 410 ----ISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYG 454
Query: 432 -LIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D++ + G ++D R+ M R + + W A++ GC
Sbjct: 455 CMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 194/430 (45%), Gaps = 42/430 (9%)
Query: 167 FKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
F QVH L D ++ + L+ + + +F + NI +N+LI
Sbjct: 26 FNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLING 85
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+ N + L++F+ + G+ T V+ AC + K G+ +H+ +++C +
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKC-GFNH 144
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ +L+ +Y+ G+LN+A VF+ +P R+VV+ T++ SGY A
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTA-------------- 190
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
G++ EA+ LF+ + V P Y +L+AC ++ DL G
Sbjct: 191 -----------------GKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 407 AHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVG 466
+VKH + S FV +L+++Y KCG +E +F++M E+D V+W+ MI G
Sbjct: 234 ----IVKHMEEMEMQKNS--FVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQG 287
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A N + E + F +ML KPD +++G L +C+ G ++ G S + + L
Sbjct: 288 YASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA--ACKVHRNIMLGEYVAK 584
L ++D+ + G + + + M + D VI + ++ A H + +
Sbjct: 348 LF-MANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 585 KLLEIEPSNS 594
+ L I P S
Sbjct: 406 EKLGISPDGS 415
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 170/370 (45%), Gaps = 39/370 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++L +C+ + + + + + F++ L+++YAKCG + AR V
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV- 269
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F SM E+D +W++M+ G+A + E +
Sbjct: 270 ------------------------------FDSMGEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+F++M EN ++S LS+CA +G +L+ + + ++++M +ALIDMY
Sbjct: 300 FFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG ++ VF M+E++IV N+ I+ +NG + VF + GI PD T
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C ++GL+ + L+ + +VD++ + G L++A + MP+R
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA-----LIAGYTQNGENEEALG 371
N + +++SG + A + +++ + WNA L Y+ +G +EA
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIA--LEPWNAGNYVQLSNIYSVSGRWDEAAE 537
Query: 372 LFRLLKRESV 381
+ ++ R+ +
Sbjct: 538 VRDMMNRKGM 547
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 18/280 (6%)
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
L+F+ N+ +N LI G+ N E L LF +++ + +TF +L AC +
Sbjct: 66 LLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRAS 125
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
+ +LG H+ VVK G D+ SL+ +Y G + D ++FE + ER V+
Sbjct: 126 NRKLGIDLHSLVVKCGF------NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVT 179
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
W A+ G G EA+ LFKKM+ G +PD ++ VL AC H G ++ G M
Sbjct: 180 WTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHME 239
Query: 520 KEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIM 577
+ + K+ + T +V+L + G +++A+++ ++M + D V W +++ +
Sbjct: 240 E---MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMG-EKDIVTWSTMIQGYASNSFPK 295
Query: 578 LG-EYVAKKLLE-IEPSNSGPYVLLSNMYA----ELGRWG 611
G E+ + L E ++P LS+ + +LG WG
Sbjct: 296 EGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 336/640 (52%), Gaps = 73/640 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ C ++K++ +HA IK+ S++ + N ++++YAKC L AR+VFD+MS
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS--- 65
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
ER+ SW++M+SG+ Q ALG F K+
Sbjct: 66 ----------------------------ERNLVSWSAMISGYEQIGEPISALGLFSKL-- 95
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N +EY + S +SACA G Q+H K S ++ +ALI MY KCG+ S
Sbjct: 96 -NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSD 154
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A ++ E N V++N+LIT + +N EV M G PD T ++ C S
Sbjct: 155 ALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNS 214
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
K G +H + ++ KL + +GN ++ MY+K L EA F +
Sbjct: 215 RDDLKRGELLHCQTIKL-KLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIE--------- 264
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCP 383
E++++SWN I+ + ++E+AL F+ +L V P
Sbjct: 265 ----------------------EKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRP 302
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
+TF + L AC+ LA + G+Q H H+++ L D+ GN+LI+MY KCG +
Sbjct: 303 DEFTFASALAACSGLASMCNGKQIHGHLIRTRLY------QDVGAGNALINMYAKCGCIA 356
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
IF M ++ VSWN MI G +G+G +A LF KM G KPD VT +G+L A +
Sbjct: 357 KAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASN 416
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
HAGLV+EG YF+SM + +G++P +H++C++DLLGRAG L+EAK ++ P D V+
Sbjct: 417 HAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVL 476
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKR 623
GSLL+AC++H ++ G+ A++LL+++P+ + PYVLLSN+YA W V KL++
Sbjct: 477 GSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGS 536
Query: 624 GVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKML 663
G+ K+PG S IE+ G F V D H +EI +LK+L
Sbjct: 537 GLKKEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKIL 576
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 209/420 (49%), Gaps = 44/420 (10%)
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
GS + C+ + + G +HA+ K+ SDV + + ++++Y KC ++ AR+VFD M E
Sbjct: 7 GSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSE 66
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
RN+VSW+++I+ YEQ G AL +F ++ I P+E ASV+SACASL +G QI
Sbjct: 67 RNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQI 123
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H + ++ L + + NAL+ MY KCGK ++
Sbjct: 124 HGQALKF-GLDSVSFVSNALITMYMKCGKCSD---------------------------- 154
Query: 335 VKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNA 394
A L + + LE N V++NALI G+ +N + ++ + R++ ++ P +TF LL
Sbjct: 155 ---ALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGT 211
Query: 395 CANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE 454
C + DL+ G H +K L S F+GN +I MY K +E+ + F ++ E
Sbjct: 212 CNSRDDLKRGELLHCQTIKLKLN------STAFIGNLIITMYSKLNLLEEAEKAFRSIEE 265
Query: 455 RDWVSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+D +SWN I C+ +AL FK+ML C +PD T L ACS + G++
Sbjct: 266 KDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQ 325
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
+ + L ++++ + GC+ +A + M Q + V W +++A H
Sbjct: 326 IHGHLIRTR-LYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQ-NLVSWNTMIAGFGNH 383
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A ++ +C K + +++H + +K S F+ N LI +Y KCG A +++
Sbjct: 104 YASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEAL 163
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N +N++IT GF+++ Q D+ E L
Sbjct: 164 ELNPVAYNALIT-----GFVEN-----------------------QQPDKGFEVLRM--- 192
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M+ + F ++F L C D K G +H K + +S ++G+ +I MY K
Sbjct: 193 MYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNL 252
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GIEPDEVTLASVVS 260
+ A + F + E++++SWN+ I+ ALE F M+ + PDE T AS ++
Sbjct: 253 LEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALA 312
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+ LA+ G QIH L+R +L D+ GNAL++MYAKCG + +A +F +M +N+V
Sbjct: 313 ACSGLASMCNGKQIHGHLIRT-RLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLV 371
Query: 321 SETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLF 373
S +M++G+ A +F KM ++ + V++ L+ G +E L F
Sbjct: 372 SWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYF 428
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 32/311 (10%)
Query: 7 VKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK 66
++ + D F D F LL +C + +H + IK + S FI N +I +Y+K
Sbjct: 190 LRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSK 249
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
L A K F + K++ +WN+ I+ CS +
Sbjct: 250 LNLLEEAEKAFRSIEEKDLISWNTFIS----------------------SCSHCN----- 282
Query: 127 AQHDRFSEALGYFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
H++ EA F +M +E E++F SAL+AC+G G Q+H L ++R D
Sbjct: 283 -DHEKALEA---FKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQD 338
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
V G+ALI+MY KCG ++ A +F M +N+VSWN++I + +G A E+F +M
Sbjct: 339 VGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKT 398
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
G++PD VT +++A EGL + + ++ + L+D+ + G+LN
Sbjct: 399 MGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLN 458
Query: 306 EARCVFDRMPI 316
EA+ + P
Sbjct: 459 EAKEYMKKFPF 469
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 176/408 (43%), Gaps = 78/408 (19%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+ S++ C+ A ++GL +HA ++ R+D+++ N ++++YAKC KL EAR VFD M
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTAT-RSDVIVSNHILNLYAKCRKLREARQVFDEM 64
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
RN+VS ++M+SG Y Q GE ALGLF
Sbjct: 65 SERNLVSWSAMISG-------------------------------YEQIGEPISALGLFS 93
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
L ++ P Y + ++++ACA+L L G+Q H +K GL +S FV N+LI
Sbjct: 94 KL---NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVS------FVSNALIT 144
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MYMKCG D + +E + V++NA+I G +N + + + M G PD T
Sbjct: 145 MYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFT 204
Query: 495 MIGVLCAC-----------------------------------SHAGLVEEGRKYFSSMS 519
+G+L C S L+EE K F S+
Sbjct: 205 FVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSI- 263
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
+E L + L+ K ++ ++PD + S LAAC ++ G
Sbjct: 264 EEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNG 323
Query: 580 EYVAKKLLEIE-PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ + L+ + G L NMYA+ G + + M + +V
Sbjct: 324 KQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLV 371
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/660 (35%), Positives = 342/660 (51%), Gaps = 80/660 (12%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+V+T N+I+ G K + A LF MP RD SWN+M++G + M
Sbjct: 32 DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
S F L Y+FGS L A + F +G QVH+++ K Y+ +VY GSAL+DMY KC ++
Sbjct: 92 SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A F + + N VSWN++I Y Q G A + M G + D+ T A ++
Sbjct: 152 DAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLD 211
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSE 322
Q+H ++++ L + NAL+ Y+KCG L++A+ +FD IR++V+
Sbjct: 212 DADFCNLTSQLHGKIIK-HGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTW 270
Query: 323 TSMVSGYAKAS-------------------------SVKSA--------------RLMFT 343
S+++ Y S S+ SA L+
Sbjct: 271 NSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIK 330
Query: 344 KMLERNVVSWNALIAGYTQN--GENEEALGLFRLL------------------------- 376
+ E++V NALI+ Y ++ G +EAL +F L
Sbjct: 331 RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAV 390
Query: 377 ------KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
+ ++ HY+F +L +C++LA QLG+Q H +K+GL ES+ FV +
Sbjct: 391 KSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGL------ESNEFVSS 444
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
SLI MY KCG +ED R FE + ++WNA++ G AQ+G AL LF M K
Sbjct: 445 SLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKM 504
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
DH+T + VL ACSH GLVE+G K+ M ++G+ P +HY C VDL GR+G L+EAK L
Sbjct: 505 DHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKAL 564
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
IE MP +PD +W + L AC+ NI L VA LLE+EP YVLLSNMY L RW
Sbjct: 565 IEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRW 624
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E +V++LM++RGV K PG SWIE+ +V+ F+ +D HP ++IY +L++L E+ R+
Sbjct: 625 DEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITRM 684
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 205/465 (44%), Gaps = 84/465 (18%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D +A LL + + T ++H +IIK + N LI Y+KCG L A+++
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257
Query: 77 FDKMSN-KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FD + +++ TWNS++ L D A +L M E
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH--------------------- 296
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F YS+ S +SAC G +H L+ K + V + +ALI M
Sbjct: 297 ----------GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISM 346
Query: 196 YGKC--GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
Y K G + A +F+ + ++ VSWNS++T Q G + DA++ F+ M ++ ++ D
Sbjct: 347 YLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHY 406
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+ ++V+ +C+ LA F+ G QIH ++ N+ V ++L+ MY+KCG + +AR F+
Sbjct: 407 SFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFV-SSSLIFMYSKCGIIEDARRSFEE 465
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+K SS+ LMF GY Q+G+ AL LF
Sbjct: 466 A---------------SKNSSITWNALMF----------------GYAQHGQCNVALDLF 494
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL- 432
L++ + V H TF +L AC +H +V+ G +FL ESD V +
Sbjct: 495 FLMEEKKVKMDHITFVAVLTAC-----------SHIGLVEQGCKFLRCMESDYGVPPRME 543
Query: 433 -----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+D+Y + G +E+ + E M + D W + C G
Sbjct: 544 HYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 206/473 (43%), Gaps = 82/473 (17%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H+L K +DVY + +++ Y KC + A +FD M R+ VSWN++I + G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+ +V M + G E D T S++ A F G Q+H+ +++ N + G+A
Sbjct: 81 EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAEN-VYAGSA 139
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM------------ 341
L+DMYAKC KL +A F + N VS +M++GYA+A ++A +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 342 ------------------FTKMLERNVVSW---------NALIAGYTQNGENEEA----- 369
T L ++ NALI Y++ G ++A
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 370 --------------LGLFRLLKRESVC-------------PTHYTFGNLLNACANLADLQ 402
L + L +E + P Y++ ++++AC N
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC--GSVEDGCRIFETMVERDWVSW 460
GR H V+K G E + + N+LI MY+K GS+++ IFE++ +D VSW
Sbjct: 320 NGRSLHGLVIKRGF------EQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSW 373
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N+++ G +Q G +A+ F M DH + VL +CS + G++ ++
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQ-IHVLAL 432
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++GL + + ++ + + G +++A+ E + ++ W +L+ H
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KNSSITWNALMFGYAQH 484
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 37/239 (15%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F+ +L SC + +++H +K S F+ + LI +Y+KCG + AR+
Sbjct: 403 IDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRS 462
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++ S + TWN+++ G+AQH + + AL
Sbjct: 463 FEEASKNSSITWNALMF-------------------------------GYAQHGQCNVAL 491
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALID 194
F M + + +F + L+AC+ + G + + +S Y M + +D
Sbjct: 492 DLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCM-ESDYGVPPRMEHYACAVD 550
Query: 195 MYGKCGRVSCARRVFDGMRER-NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+YG+ GR+ A+ + + M + + W + + G A +V ++ +EP+E
Sbjct: 551 LYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLE--MEPEE 607
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++ H L G +D++ N++++ Y KC + +F+ M RD VSWN MI G
Sbjct: 18 LLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINC 77
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
G + + + M CG + D T +L + AG+ G++ S + K
Sbjct: 78 GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIK 127
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 311/543 (57%), Gaps = 50/543 (9%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S+ SF L +CA S + ++G H + K + D+ + + L+D Y K G + CA+RVF
Sbjct: 9 SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF 68
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
GM R++V+ N++I+ ++G +A +F M ++C+
Sbjct: 69 MGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER-------------NSCS------ 109
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
N+++ Y K G +N AR +FD P+++VVS +++ GY
Sbjct: 110 ---------------------WNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGY 148
Query: 330 AKASSVKSARLMFTKM-LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
K+ + +A+ +F M RN V+WN +I+ Y Q GE A+ +F+ ++ E+V PT T
Sbjct: 149 CKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTM 208
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
+LL+ACA+L L +G H ++ L+ D+ +GN+LIDMY KCG++E +
Sbjct: 209 VSLLSACAHLGALDMGEWIHGYIRTKRLKI------DVVLGNALIDMYCKCGALEAAIDV 262
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F + ++ WN++IVG NG G EA+ F M G KPD VT +G+L CSH+GL+
Sbjct: 263 FHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLL 322
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G++YFS M +GL P +HY CMVDLLGRAG L EA LI AMPM+P++++ GSLL
Sbjct: 323 SAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLR 382
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
AC++H++ LGE V ++LLE++P + G YV LSN+YA L RW +V RKLM KRGV K
Sbjct: 383 ACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKT 442
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD---DEAYEEQ 685
PGCS IE+ V+ F+ D HP +I L + +E+K G+VPN ++ D EE+
Sbjct: 443 PGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEK 502
Query: 686 NGS 688
G+
Sbjct: 503 EGA 505
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 159/372 (42%), Gaps = 67/372 (18%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF-- 77
+ F+ +L SC S H +I+K F ++ +Q L+D YAK G L A++VF
Sbjct: 11 TSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMG 70
Query: 78 -----------------------------DKMSNKNVFTWNSIITGLLKWGFIDDASRLF 108
D M+ +N +WNS+IT K G I+ A +F
Sbjct: 71 MPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMF 130
Query: 109 ASMPERDQCSWN--------------------------------SMVSGFAQHDRFSEAL 136
P +D SWN +M+S + Q F A+
Sbjct: 131 DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAI 190
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M SEN +E + S LSACA MG +H + R DV +G+ALIDMY
Sbjct: 191 SMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMY 250
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A VF G+ +NI WNS+I NG +A+ F+ M GI+PD VT
Sbjct: 251 CKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFV 310
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++S C+ G + + ++ L + +VD+ + G L EA + MP+
Sbjct: 311 GILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPM 370
Query: 317 RNVVSETSMVSG 328
+ SMV G
Sbjct: 371 K----PNSMVLG 378
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R V P+ +F +L +CA + QLG H ++K G E D+ + L+D Y
Sbjct: 3 RNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGF------EYDMILQTGLLDFYA 56
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K G ++ R+F M RD V+ NAMI +++GY EA LF M E+
Sbjct: 57 KVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMT---ERNSCSWNSM 113
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ C C G + R F P+KD + ++D ++ L A+ L M
Sbjct: 114 ITCYCK-LGDINSARLMFDC-------NPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMG 165
Query: 556 MQPDAVIWGSLLAA 569
++V W ++++A
Sbjct: 166 SARNSVTWNTMISA 179
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/592 (36%), Positives = 330/592 (55%), Gaps = 48/592 (8%)
Query: 96 LKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSEN-FALSEYSF 154
+K G +D A +F M +R+ SW +++ GF +H + L +M + + A +EY+
Sbjct: 3 VKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTL 62
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR- 213
++L AC D G +H L ++ Y + S+L+ +Y K GR+ ARRVFDG
Sbjct: 63 SASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGL 122
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVF--VRMMASGIEPDEVTLASVVSACASLAAFKEG 271
I +WN++++ Y G DAL VF +R +PDE T AS++ AC+ L A +EG
Sbjct: 123 GSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREG 182
Query: 272 LQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
Q+HA + ++ +L ALVDMY KC R+P+
Sbjct: 183 AQVHAAMTASGFSTASNAILAGALVDMYVKC----------RRLPV-------------- 218
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
A +F ++ +NV+ W A++ G+ Q G+ EAL LFR R P + +
Sbjct: 219 -------AMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSS 271
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
++ A+ A ++ GRQ H + G++ +G +D+ GNS++DMY+KCG ++ R+F
Sbjct: 272 VVGVLADFALVEQGRQVHCY----GIKDPTG--TDVSAGNSIVDMYLKCGLPDEAERMFR 325
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M + VSW M+ G ++G G EA+ LF++M G +PD VT + +L ACSHAGLV+E
Sbjct: 326 EMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDE 385
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
R+YFS + ++ + P +HY CMVDLLGRAG L EA+ LI MPM+P +W +LL+AC
Sbjct: 386 CRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSAC 445
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+VH+++ +G LL ++ N YV LSN+ AE G W E +VR MR+RG+ KQ G
Sbjct: 446 RVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGG 505
Query: 631 CSWIEILGHVNVFM---VKDKRHPLNKEIYLVLK-MLTREMKRVGYVPNASD 678
CSW+E+ V+ F +++ HP +I VL+ M TR +++GY NA D
Sbjct: 506 CSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGY--NADD 555
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 184/373 (49%), Gaps = 38/373 (10%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS-NKNVFTWNSIITGLLKWG 99
+H +++ + + + L+ VY+K G + AR+VFD + TWN++++G G
Sbjct: 81 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
DA +F M + H E++F S L
Sbjct: 141 HGRDALLVFREM-----------------------------RRHEGQHQPDEFTFASLLK 171
Query: 160 ACAGSVDFKMGTQVHALLSKSRYS--SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
AC+G + G QVHA ++ S +S S+ + AL+DMY KC R+ A +VF+ + +N+
Sbjct: 172 ACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNV 231
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+ W +++ + Q G ++ALE+F R SG PD L+SVV A A ++G Q+H
Sbjct: 232 IQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCY 291
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ + D+ GN++VDMY KCG +EA +F M NVVS T+MV+G K +
Sbjct: 292 GIK-DPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGRE 350
Query: 338 ARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHYTFGNLL 392
A +F +M +E + V++ AL++ + G +E F ++R+ +V P + ++
Sbjct: 351 AVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMV 410
Query: 393 NACANLADLQLGR 405
+ +L+ R
Sbjct: 411 DLLGRAGELREAR 423
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 195/411 (47%), Gaps = 69/411 (16%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEV 253
MY KCG + A VF GMR+RN+VSW +L+ + ++G A+ L + M AS P+E
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL++ + AC + G+ IH +R +D V+ ++LV +Y+K G++ +AR VFD
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHD-VVASSLVLVYSKGGRIGDARRVFDG 119
Query: 314 MPI-RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
+ + + +MVSGYA A + A L+F +M G+++
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRR--------------HEGQHQ----- 160
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
P +TF +LL AC+ L + G Q H + G S+ + +L
Sbjct: 161 ----------PDEFTFASLLKACSGLGATREGAQVHAAMTASGF----STASNAILAGAL 206
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY+KC + ++FE + ++ + W A++VG AQ G TEAL LF++ G +PD
Sbjct: 207 VDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDS 266
Query: 493 VTMIGVLCACSHAGLVEEGRKY------------------FSSMSKEHGL---------- 524
+ V+ + LVE+GR+ M + GL
Sbjct: 267 HVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFRE 326
Query: 525 --APLKDHYTCMVDLLGRAGCLDEAKTLIEAM---PMQPDAVIWGSLLAAC 570
AP +T MV+ LG+ G EA L E M ++PD V + +LL+AC
Sbjct: 327 MRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 377
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 145/306 (47%), Gaps = 33/306 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF--ASEIFIQNRLIDVYAKCGCLYGARK 75
D FA LL +C + + +VHA + S F AS + L+D+Y KC L A +
Sbjct: 162 DEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQ 221
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF+++ KNV W +++ G + G + +A LF W S A+ D S
Sbjct: 222 VFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRF-------WRSG----ARPD--SHV 268
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L V + + +FAL E G QVH K +DV G++++DM
Sbjct: 269 LSSVVGVLA-DFALVE-----------------QGRQVHCYGIKDPTGTDVSAGNSIVDM 310
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG A R+F MR N+VSW +++ ++G +A+ +F M A G+EPDEVT
Sbjct: 311 YLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTY 370
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++SAC+ E + + + R +R +VD+ + G+L EAR + MP
Sbjct: 371 LALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMP 430
Query: 316 IRNVVS 321
+ V
Sbjct: 431 MEPTVG 436
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ +V NSI+ LK G D+A R+F M + SW +MV+G +H EA+ F
Sbjct: 297 TGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFE 356
Query: 141 KMHSENFALSEYSFGSALSAC--AGSVD-----FKMGTQVHALLSKSRYSSDVYMGSALI 193
+M + E ++ + LSAC AG VD F + + K+ + + ++
Sbjct: 357 EMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHY------ACMV 410
Query: 194 DMYGKCGRVSCARRVFDGMR-ERNIVSWNSLITC---YEQNGPASDALEVFVRMMASGIE 249
D+ G+ G + AR + M E + W +L++ ++ +A +V + M G
Sbjct: 411 DLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM--DGDN 468
Query: 250 P-DEVTLASVVS 260
P + VTL++V++
Sbjct: 469 PVNYVTLSNVLA 480
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 335/615 (54%), Gaps = 53/615 (8%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N ++T K + A +LF +P+R+ +W ++SGFA+ F +M ++
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
++Y+ S L C+ + ++G VHA + ++ DV +G++++D+Y KC A R+
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVR-------------------------- 242
F+ M E ++VSWN +I Y + G +L++F R
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507
Query: 243 -----MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
M+ G E VT + + +SL+ + G Q+H +++ +D + ++LV+M
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKF-GFDSDGFIRSSLVEM 566
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KCG++++A + +P+ + G A+ S K + +VSW +++
Sbjct: 567 YCKCGRMDKASIILRDVPL------DVLRKGNARVS---------YKEPKAGIVSWGSMV 611
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
+GY NG+ E+ L FRL+ RE V T +++ACAN L+ GR H +V K G R
Sbjct: 612 SGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHR 671
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
D +VG+SLIDMY K GS++D +F E + V W +MI G A +G G A+
Sbjct: 672 I------DAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAI 725
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
GLF++ML G P+ VT +GVL ACSHAGL+EEG +YF M + + P +H T MVDL
Sbjct: 726 GLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDL 785
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
GRAG L + K I + +W S L++C++H+N+ +G++V++ LL++ PS+ G Y
Sbjct: 786 YGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAY 845
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIY 657
VLLSNM A RW E RVR LM +RGV KQPG SWI++ ++ F++ D+ HP + EIY
Sbjct: 846 VLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIY 905
Query: 658 LVLKMLTREMKRVGY 672
L +L +K +GY
Sbjct: 906 SYLDILIGRLKEIGY 920
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 220/427 (51%), Gaps = 38/427 (8%)
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
+GT +HAL K+ + + L+ +Y K ++ A+++FD + +RN +W LI+ +
Sbjct: 308 LGT-LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFA 366
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
+ G + +F M A G P++ TL+SV+ C+ + G +HA ++R + D+
Sbjct: 367 RAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLR-NGIDVDV 425
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
VLGN+++D+Y KC A +F+ M +VVS M+ Y +A V+ + MF ++ +
Sbjct: 426 VLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK 485
Query: 349 NVVSWNALIAGYTQNGENEEAL-GLFRLLKRESVCPTHY---TFGNLLNACANLADLQLG 404
+VVSWN ++ G Q G AL L+ +++ C T + TF L ++L+ ++LG
Sbjct: 486 DVVSWNTIVDGLLQCGYERHALEQLYCMVE----CGTEFSAVTFSIALILASSLSHVELG 541
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM------------ 452
RQ H V+K G +SD F+ +SL++MY KCG ++ I +
Sbjct: 542 RQLHGMVLKFGF------DSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARV 595
Query: 453 ----VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
+ VSW +M+ G NG + L F+ M+ D T+ ++ AC++AG++
Sbjct: 596 SYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGIL 655
Query: 509 EEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
E GR + + K + D Y + ++D+ ++G LD+A ++ +P+ V+W S+
Sbjct: 656 EFGRHVHAYVQK---IGHRIDAYVGSSLIDMYSKSGSLDDA-WMVFRQSNEPNIVMWTSM 711
Query: 567 LAACKVH 573
++ +H
Sbjct: 712 ISGYALH 718
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 229/508 (45%), Gaps = 69/508 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ +L C ++ + VHA ++++ ++ + N ++D+Y KC A ++F+ M+
Sbjct: 393 LSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMN 452
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WN +I L+ G ++ + +F +P +D SWN++V G Q AL
Sbjct: 453 EGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYC 512
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M S +F AL + ++G Q+H ++ K + SD ++ S+L++MY KCGR
Sbjct: 513 MVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGR 572
Query: 202 VSCARRV-----FDGMRERN-----------IVSWNSLITCYEQNGPASDALEVFVRMMA 245
+ A + D +R+ N IVSW S+++ Y NG D L+ F M+
Sbjct: 573 MDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVR 632
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ D T+ +++SACA+ + G +HA + + R D +G++L+DMY+K G L+
Sbjct: 633 ELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH-RIDAYVGSSLIDMYSKSGSLD 691
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A VF + N+V TSM+SGYA +G+
Sbjct: 692 DAWMVFRQSNEPNIVMWTSMISGYA-------------------------------LHGQ 720
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
A+GLF + + + P TF +LNAC +H +++ G R+ +
Sbjct: 721 GMHAIGLFEEMLNQGIIPNEVTFLGVLNAC-----------SHAGLIEEGCRYFRMMKDA 769
Query: 426 IFVG------NSLIDMYMKCGSVEDGCR-IFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
+ S++D+Y + G + IF+ + W + + C + E
Sbjct: 770 YCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHK-NVEMGK 828
Query: 479 LFKKMLL--CGEKPDHVTMIGVLCACSH 504
+MLL P ++ +CA +H
Sbjct: 829 WVSEMLLQVAPSDPGAYVLLSNMCASNH 856
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++ + +V +L +D ++ +C + + R VHA + K + ++ + LID+Y
Sbjct: 625 KTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMY 684
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
+K G L A VF + + N+ W SM+S
Sbjct: 685 SKSGSLDDAWMVFRQSNEPNIVMW-------------------------------TSMIS 713
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR-YS 183
G+A H + A+G F +M ++ +E +F L+AC+ + + G + ++ + +
Sbjct: 714 GYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCIN 773
Query: 184 SDVYMGSALIDMYGKCGRVS 203
V ++++D+YG+ G ++
Sbjct: 774 PGVEHCTSMVDLYGRAGHLT 793
>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 873
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 335/585 (57%), Gaps = 11/585 (1%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
N+++ L+ G +++A LF+ + +RD SWN+++SG++ +D++ EA+ +F K+
Sbjct: 291 NALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSD 350
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ S L ACA S + ++G +H +L S D +G+AL+ Y KC V A
Sbjct: 351 PDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFH 410
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
F + ++++SWNS++ + + G + + M+ +PD T+ S+++ C ++
Sbjct: 411 SFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLG 470
Query: 268 FKEGLQIHARLMRCEKLRNDL--VLGNALVDMYAKCGKLNEARCVFDRMP-IRNVVSETS 324
+ ++H +R D + NAL+D Y+KCG ++ A +F+ RN+V+ S
Sbjct: 471 GCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNS 530
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+S Y S A +F+ M E ++ +WN +I Y +N +ALGLFR L+ + + P
Sbjct: 531 MISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPD 590
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ +LL C LA +L ++ H G F S E D+++ +L+D Y KCG+V+
Sbjct: 591 AVSIMSLLPVCNELASFRLLKECH------GYSFRSRFE-DVYLDGALLDAYAKCGAVDC 643
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
++FE+ ++D V + +MI G A +G G EAL +F ML G KPDHV + +L ACSH
Sbjct: 644 AYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSH 703
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV++G F SM + + P +HY C+VDLL R G + +A + + MP+QPDA IWG
Sbjct: 704 TGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANIWG 763
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL ACK H + LG VA++L E + + G YV++SN+YA +W V+ VRKLM+++
Sbjct: 764 TLLGACKTHHEVELGLVVAEQLFETKADDIGNYVVMSNLYAADAKWDGVLEVRKLMKEKE 823
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
+ K PGCSWIE+ G N F+ D HP IY +L L +++KR
Sbjct: 824 LKKPPGCSWIEVEGEKNFFLAGDSLHPQRNMIYNLLNTLHQQIKR 868
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 156/631 (24%), Positives = 280/631 (44%), Gaps = 113/631 (17%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG-CLYGARKVFDKMS 81
A +L C R + +H+ ++KS + + N LI +YAK G Y A F+ +
Sbjct: 150 ASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAAFNSII 209
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K+V TWN+II+ L + + DA +LF+ M E
Sbjct: 210 HKDVVTWNTIISALAEKNLMFDALQLFSLMLE---------------------------- 241
Query: 142 MHSENFALSEYSFGSALSACA---GSVDFKMGTQVHALLS-KSRYSSDVYMGSALIDMYG 197
E + + L CA +V + G ++H + ++ D+ + +AL+++Y
Sbjct: 242 ---EPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYL 298
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ G++ A +F +++R++VSWN+LI+ Y N +A++ F +++ G +PD VTL S
Sbjct: 299 RVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLIS 358
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+ ACA + G IH ++R L D +GNALV Y KC
Sbjct: 359 VLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKC---------------- 402
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+ VKSA F+ + ++++SWN+++ + + G + L L+
Sbjct: 403 ---------------NDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLML 447
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTH--------------------------- 410
RE P H+T +++N C + ++ H +
Sbjct: 448 RERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCG 507
Query: 411 VVKHGLRFL--SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
++ + L+ S + ++ NS+I Y+ C S D IF M E D +WN MI A
Sbjct: 508 IIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYA 567
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL---A 525
+N +ALGLF+++ + G KPD V+++ +L C+ F + + HG +
Sbjct: 568 ENNCPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELA-------SFRLLKECHGYSFRS 620
Query: 526 PLKDHYT--CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVA 583
+D Y ++D + G +D A L E+ Q D V++ S+++ +H +GE
Sbjct: 621 RFEDVYLDGALLDAYAKCGAVDCAYKLFES-SSQKDLVMFTSMISGYAIHG---MGEEAL 676
Query: 584 KKLLEIEPSNSGP-YVLLSNMYAELGRWGEV 613
K + S P +V+++++ + G V
Sbjct: 677 KVFTNMLESGVKPDHVVVTSILSACSHTGLV 707
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 197/411 (47%), Gaps = 47/411 (11%)
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH--SENFALSEYSFGSALSACAGSVDFK 168
M D SW+S + + + E L FV S F + F + +CA
Sbjct: 1 MLPLDFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAIN 60
Query: 169 MGT--QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITC 226
+G Q +A+ VY G L+++Y +CG ++F+ + R++V+WN +++
Sbjct: 61 IGKALQGYAVKQGEIACQSVYKG--LLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSG 118
Query: 227 Y-EQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y + A+ +FV+M A G ++P +T+AS++ C+ + G IH+ +M+ L
Sbjct: 119 YCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMK-SGL 177
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTK 344
D ++GNAL+ MYAK G+ YA F
Sbjct: 178 DRDTLVGNALISMYAKSGQ--------------------PWYDAYAA----------FNS 207
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD---L 401
++ ++VV+WN +I+ + +AL LF L+ E + P + T +L CA+ +
Sbjct: 208 IIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSC 267
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+ G++ H ++ + + DI V N+L+++Y++ G +E+ +F + +RD VSWN
Sbjct: 268 RFGKEIHGYIHRR-----TELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWN 322
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
+I G + N EA+ F K+L G PD VT+I VL AC+++ + G+
Sbjct: 323 TLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGK 373
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 201/471 (42%), Gaps = 74/471 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
DS +L +C S+++ + +H I++ SE + N L+ Y KC + A
Sbjct: 352 DSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHS 411
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM-PERDQCSWNSMVSGFAQHDRFSEA 135
F +S+K++ +WNS++ ++G RL M ER + +++S +
Sbjct: 412 FSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSII---NFCITV 468
Query: 136 LG----YFVKMHSENFALSEYSFGS--------ALSACAGSVDFKMGTQVHALLSKSRYS 183
LG V +S L E +G A S C G +D+ + + S
Sbjct: 469 LGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKC-GIIDYAL-----KIFESSSGK 522
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
++ +++I Y C + A +F GM E ++ +WN +I Y +N DAL +F R+
Sbjct: 523 RNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRL 582
Query: 244 MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGK 303
G++PD V++ S++ C LA+F+ + H R D+ L AL+D YAKCG
Sbjct: 583 QIKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSR--FEDVYLDGALLDAYAKCGA 640
Query: 304 LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQN 363
++ A +F+ +++V TSM+SGYA +
Sbjct: 641 VDCAYKLFESSSQKDLVMFTSMISGYAI-------------------------------H 669
Query: 364 GENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEE 423
G EEAL +F + V P H ++L+AC +HT +V GL E
Sbjct: 670 GMGEEALKVFTNMLESGVKPDHVVVTSILSAC-----------SHTGLVDQGLNIFHSME 718
Query: 424 SDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
I + ++ +D+ + G ++D M ++ D W ++ C
Sbjct: 719 EVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANIWGTLLGAC 769
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 15/278 (5%)
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLF--RLLKRESVCPTHYTFGNLLNACANLADLQ 402
ML + SW++ I N +++E L +F + P ++ F + +CA L +
Sbjct: 1 MLPLDFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAIN 60
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
+G+ + VK G E + V L+++Y +CG+ ++ ++FE + RD V+WN
Sbjct: 61 IGKALQGYAVKQG------EIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNI 114
Query: 463 MIVG-CAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
++ G C + T+A+ LF KM GE KP +T+ +L CS G G+ S + K
Sbjct: 115 ILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMK 174
Query: 521 EHGLAPLKDHYTCMVDLLGRAG-CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLG 579
GL ++ + ++G +A ++ + D V W ++++A +N+M
Sbjct: 175 S-GLDRDTLVGNALISMYAKSGQPWYDAYAAFNSI-IHKDVVTWNTIISAL-AEKNLMFD 231
Query: 580 EYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
L+ EP Y+ ++ + +G V R
Sbjct: 232 ALQLFSLMLEEPIEPN-YITIACILPVCASFGNNVSCR 268
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/656 (33%), Positives = 351/656 (53%), Gaps = 73/656 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ L+ C+ KS++D ++ + +K F + N+LID Y KCG + ARKVFD++
Sbjct: 80 YSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVP 137
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++++ WN SM++ + ++ R EA+ + +
Sbjct: 138 HRHIVAWN-------------------------------SMIASYIRNGRSKEAIDIYQR 166
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCG 200
M + E++F S A + G + H + S+V++GSAL+DMY K G
Sbjct: 167 MVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 226
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR V D + +++V + +LI Y +G ++L+VF M GIE +E TL+SV+
Sbjct: 227 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 286
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
C +L G IH +++ L + + +L+ MY +CG ++++ VF + N V
Sbjct: 287 CCGNLEDLTSGRLIHGLIVKA-GLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQV 345
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
+ TS+ I G QNG E AL FR + R S
Sbjct: 346 TWTSV-------------------------------IVGLVQNGREEIALLKFRQMLRSS 374
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T ++L AC++LA L+ G+Q H V+K GL + D +VG +LID Y KCG
Sbjct: 375 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGL------DIDKYVGAALIDFYGKCG 428
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
S E +F ++E D VS N+MI AQNG+G EAL LF M G +P++VT +GVL
Sbjct: 429 STEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLS 488
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC++AGL+EEG FSS + KDHY CMVDLLGRAG L EA+ LI + + D
Sbjct: 489 ACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDV 547
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
VIW +LL+AC++H ++ + + V +++++ P + G +VLLSN+YA G W +V+ ++ M
Sbjct: 548 VIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAM 607
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R+ + K P SW+++ ++ FM D HP ++I L+ L ++K +GYVP+
Sbjct: 608 REMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDT 663
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 203/465 (43%), Gaps = 69/465 (14%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHAR-IIKSQFASEIFIQNRLIDVYAK 66
+++V D D F+ + + V + +R H + ++ S +F+ + L+D+YAK
Sbjct: 165 QRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAK 224
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGF 126
G + AR V D++ K+V + ++I G +
Sbjct: 225 FGKMRDARLVSDQVVGKDVVLFTALIVG-------------------------------Y 253
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+ H E+L F M + +EY+ S L C D G +H L+ K+ S V
Sbjct: 254 SHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAV 313
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++L+ MY +CG V + +VF N V+W S+I QNG AL F +M+ S
Sbjct: 314 ASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRS 373
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
I P+ TL+SV+ AC+SLA ++G QIHA +M+ L D +G AL+D Y KCG
Sbjct: 374 SITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF-GLDIDKYVGAALIDFYGKCGSTEI 432
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR VF+ + +VVS SM+ YA QNG
Sbjct: 433 ARSVFNGLLEVDVVSVNSMIYSYA-------------------------------QNGFG 461
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EAL LF +K + P + T+ +L+AC N L+ G + G L+ +
Sbjct: 462 HEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHY-- 519
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
++D+ + G +++ + + D V W ++ C +G
Sbjct: 520 ---ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG 561
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 46/235 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S + +L +C + +++HA ++K + ++ LID Y KCG AR VF
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVF 437
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
+ + +V + NS+I + GF +A +LF+ M E + +W
Sbjct: 438 NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTW-------------- 483
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG---- 189
LG LSAC + + G + S +R S ++ +
Sbjct: 484 --LG-------------------VLSACNNAGLLEEGCHI---FSSARNSGNIELTKDHY 519
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
+ ++D+ G+ GR+ A + + + ++V W +L++ +G A V R++
Sbjct: 520 ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 574
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 344/628 (54%), Gaps = 48/628 (7%)
Query: 52 SEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASM 111
S IF+ L+ + +C +++ + + ++ N +++ + ++ +F+ +
Sbjct: 19 SPIFL---LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHI 75
Query: 112 -PERDQCSWNSMVSGFAQ--HDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFK 168
P + ++N M+ HD + L + +M + N + + ++F ACA + +
Sbjct: 76 TPHPNDYAFNIMLRATTTTWHD-YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIR 134
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
M H + K +D + ++++ MY +CG AR+VFD + E+++VSWNSL++ Y
Sbjct: 135 MARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYA 194
Query: 229 QNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+ G A +A+EVF R+ SG EPDE++L SV+ AC L + G + ++ ++ +
Sbjct: 195 KLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE-RGMKVN 253
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+G+AL+ MY+KCG+L S+R +F M
Sbjct: 254 SYIGSALISMYSKCGEL-------------------------------VSSRRIFDGMPS 282
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
R+ ++WNA I+ Y QNG +EA+ LF +K V P T +L+ACA++ L LG+Q
Sbjct: 283 RDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQM 342
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ GL + DIFV +LIDMY KCGS+E R+F M ++ SWNAMI
Sbjct: 343 DEYATHRGL------QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISAL 396
Query: 468 AQNGYGTEALGLFKKMLLCG--EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
A +G EAL LF++M G +P+ +T + +L AC HAGLV+EG + F MS GL
Sbjct: 397 ASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLV 456
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
P +HY+CMVDLL RAG L EA +IE MP +PD V G+L +AC+ +N+ +GE V +
Sbjct: 457 PKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQM 516
Query: 586 LLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMV 645
LLE++PSNSG Y++ S +Y L W + R+R LMR+ GV K PGCSWIE+ + F+
Sbjct: 517 LLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLS 576
Query: 646 KDKRHPLNKEIYLVLKMLTREMKRVGYV 673
D + ++ ++ +L E+K+ GY+
Sbjct: 577 GDGLTLDSIDVRNIIDLLYEELKKEGYL 604
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 33/300 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + R V +++ +I + LI +Y+KCG L +R++F
Sbjct: 218 DEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF 277
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M +++ TWN+ I+ + G D+A LF SM E
Sbjct: 278 DGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN----------------------- 314
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ + + LSACA +G Q+ + D+++ +ALIDMY
Sbjct: 315 --------GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYA 366
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDEVTL 255
KCG + A+RVF+ M +N SWN++I+ +G A +AL +F RM G P+++T
Sbjct: 367 KCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITF 426
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++SAC EG ++ + L + + +VD+ ++ G L EA V ++MP
Sbjct: 427 VSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMP 486
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/603 (34%), Positives = 332/603 (55%), Gaps = 40/603 (6%)
Query: 51 ASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFAS 110
A+ F + ++ + K G + AR++FD M K+V ++ +++ L+K G + DA +L+
Sbjct: 151 AASSFTYDFMVSEHVKAGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYER 210
Query: 111 MPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG 170
P + +M++GF +++ +A F KM + + + + AC G+ +F +
Sbjct: 211 CPLYSVAFFTAMIAGFVRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLA 270
Query: 171 TQVHALLSK--------------------------------SRYSSDVYMGSALIDMYGK 198
V L K DV +AL+D+Y +
Sbjct: 271 MGVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAE 330
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
G + ARRV D M ERN VSW++LI +EQ G +++AL+++ +M+A G P+ +SV
Sbjct: 331 LGDLEGARRVLDAMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSV 390
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+SACA+L + G +IHA ++ + L + ++L+DMY KC + +A+ +F+ +P +N
Sbjct: 391 LSACATLHDLRGGTRIHANALKM-GFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKN 449
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
V S++SGY+ + A +F KM RN SWN +I+GY +N +AL F +
Sbjct: 450 TVCWNSLISGYSWNGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLA 509
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P T ++L ACANL L++G+ H +VK G+ E +IF+G +L DMY K
Sbjct: 510 SGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGI------EDNIFMGTALSDMYAK 563
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
G ++ R+F M E++ ++W AM+ G A+NG+ E++ LF+ M+ P+ T + +
Sbjct: 564 SGDLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAI 623
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L ACSH GLVE+ YF +M + HG+ P HYTCMVD+L RAG L EA+ L+ +P +
Sbjct: 624 LFACSHCGLVEQAIHYFETM-QAHGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKL 682
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
D W SLL+AC +RN +GE AKKL E+E N+ YVLLSNMYA G+W + R
Sbjct: 683 DTSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRI 742
Query: 619 LMR 621
LM+
Sbjct: 743 LMQ 745
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 232/464 (50%), Gaps = 77/464 (16%)
Query: 50 FASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFA 109
F I + N LI +Y + G A +VFD M ++V +W +++ + G ++ A R+
Sbjct: 283 FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLD 342
Query: 110 SMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKM 169
+MPER++ SW+++++ Q +EAL + +M +E + F S LSACA D +
Sbjct: 343 AMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRG 402
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
GT++HA K +SS +++ S+LIDMY KC + + A+R+F+ + E+N V WNSLI+ Y
Sbjct: 403 GTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSW 462
Query: 230 NG------------PA-------------------SDALEVFVRMMASGIEPDEVTLASV 258
NG PA DAL F M+ASG P E+TL+SV
Sbjct: 463 NGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSV 522
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ ACA+L + + G +HA +++ + +++ +G AL DMYAK G L+ +R +F +MP +N
Sbjct: 523 LLACANLCSLEMGKMVHAEIVKL-GIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKN 581
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVV----SWNALIAGYTQNGENEEALGLFR 374
++ T+MV G A+ + + L+F M+ + ++ A++ + G E+A+ F
Sbjct: 582 NITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAILFACSHCGLVEQAIHYFE 641
Query: 375 LLKRESVCP--THYT------------------------------FGNLLNACANLADLQ 402
++ + P HYT + +LL+AC + +
Sbjct: 642 TMQAHGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKLDTSSWSSLLSACNTYRNKE 701
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLI-DMYMKCGSVEDG 445
+G +A + H L E D G L+ +MY CG +D
Sbjct: 702 IGERAAKKL--HEL------EKDNTAGYVLLSNMYASCGKWKDA 737
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 172/308 (55%), Gaps = 2/308 (0%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L +C + R+HA +K F+S +F+ + LID+Y KC A+++F+ +
Sbjct: 387 FSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLP 446
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
KN WNS+I+G G + +A LF MP R+ SWN+M+SG+A++ RF +AL YF
Sbjct: 447 EKNTVCWNSLISGYSWNGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCA 506
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + E + S L ACA +MG VHA + K +++MG+AL DMY K G
Sbjct: 507 MLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGD 566
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RR+F M E+N ++W +++ +NG A +++ +F M+A+ I P+E T +++ A
Sbjct: 567 LDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAILFA 626
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVV 320
C+ ++ + + M+ + +VD+ A+ G+L EA + ++P + +
Sbjct: 627 CSHCGLVEQAIH-YFETMQAHGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKLDTS 685
Query: 321 SETSMVSG 328
S +S++S
Sbjct: 686 SWSSLLSA 693
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/481 (38%), Positives = 294/481 (61%), Gaps = 11/481 (2%)
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y GR+ + +F + ++ W ++I + G AL + +M+ G+EP+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S++ C + G +H++ ++ +DL + L+D+YA+ G + A+ +FD MP
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKL-GFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++VS T+M++ YAK + +AR++F M ER+ V WN +I GYTQNG EAL LFR
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + P T ++L+AC L L+ GR H+++ +G++F ++ VG +L+DM
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF------NVHVGTALVDM 247
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+ED +F+ + ++D V+WN+MIVG A G+ EAL LFK M G P ++T
Sbjct: 248 YSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITF 307
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
IG+L AC H+G V EG F+ M E+G+ P +HY CMV+LLGRAG +++A L++ M
Sbjct: 308 IGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN 367
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PD V+WG+LL AC++H I LGE + + L++ +NSG Y+LLSN+YA +G W V R
Sbjct: 368 IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVAR 427
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R +M+ GV K+PGCS IE+ V+ F+ HP KEIY++L+ + +K GY P
Sbjct: 428 LRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQ 487
Query: 676 A 676
Sbjct: 488 T 488
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 157/297 (52%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
P A S L+ + + +H++ +K F S+++++ L+DVYA+ G + A+++FD M
Sbjct: 73 PNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM 132
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K++ + +++T K G +D A LF M ERD WN M+ G+ Q+ +EAL F
Sbjct: 133 PEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFR 192
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M +E + S LSAC + G VH+ + + +V++G+AL+DMY KCG
Sbjct: 193 RMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR VFD + ++++V+WNS+I Y G + +AL++F M G+ P +T ++S
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
AC EG I ++ + + +V++ + G + +A + M I
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 199/446 (44%), Gaps = 104/446 (23%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
++L YA G L + +F + N +VF W +II
Sbjct: 13 DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII------------------------- 47
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
G A +AL ++ +M ++ + ++F S L C + G +H+
Sbjct: 48 ------HGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQA 97
Query: 178 SKSRYSSDVYMGSALIDM-------------------------------YGKCGRVSCAR 206
K + SD+Y+ + L+D+ Y K G + AR
Sbjct: 98 VKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAAR 157
Query: 207 RVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLA 266
+FDGM ER+ V WN +I Y QNG ++AL +F RM+ + +P+EVT+ SV+SAC L
Sbjct: 158 VLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 217
Query: 267 AFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
A + G +H+ + ++ ++ +G ALVDMY+KCG L +AR VFD++ ++VV+ SM+
Sbjct: 218 ALESGRWVHSYI-ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMI 276
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
GYA + G++Q EAL LF+ + R + PT+
Sbjct: 277 VGYA--------------------------MXGFSQ-----EALQLFKSMCRMGLHPTNI 305
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGC 446
TF +L+AC + + G + + ++ G E I ++++ + G VE
Sbjct: 306 TFIGILSACGHSGWVTEGWD-----IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 360
Query: 447 RIFETM-VERDWVSWNAMIVGCAQNG 471
+ + M +E D V W ++ C +G
Sbjct: 361 ELVKNMNIEPDPVLWGTLLGACRLHG 386
>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 849
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 331/590 (56%), Gaps = 12/590 (2%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM- 142
+VF NS+++ L+ G I++A+ LF M +D SWN +++G+A + + +AL F +
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLV 321
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCGR 201
+ +L + S L CA D G ++H+ + + Y D +G+ALI Y + G
Sbjct: 322 QKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
S A F M ++I+SWN+++ + + L + + I D VT+ S++
Sbjct: 382 TSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKF 441
Query: 262 CASLAAFKEGLQIHARLMRCEKLRND--LVLGNALVDMYAKCGKLNEARCVFDRMP-IRN 318
C ++ + ++H ++ L N+ LGNAL+D YAKCG + A +F + R
Sbjct: 442 CTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRT 501
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
+V+ S++SGY + S A+++F++M ++ +W+ ++ Y ++ EA+G+FR ++
Sbjct: 502 LVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQA 561
Query: 379 ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
+ P T NLL CA LA L L RQ H ++++ G DI + +L+D+Y K
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-------GRLGDIRLKGTLLDVYAK 614
Query: 439 CGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
CGS++ +F++ RD V + AM+ G A +G G EAL +F M+ KPDHV + +
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTL 674
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L AC HAGL+++G + + S+ HG+ P + Y C VDLL R G LD+A + I MP++P
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEP 734
Query: 559 DAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRK 618
+A IWG+LL AC + + LG VA LL+ E ++G +VL+SNMYA +W V+ +R
Sbjct: 735 NANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRN 794
Query: 619 LMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
LM+K+ + K GCSW+E+ G +VF+ D HP I+ ++ L +MK
Sbjct: 795 LMKKKEMKKPAGCSWLEVDGKRDVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 277/635 (43%), Gaps = 90/635 (14%)
Query: 7 VKQIVGDLAFL-----DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLI 61
++Q V + L D F ++ +C ++ R +H + K + + ++
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVL 63
Query: 62 DVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
++YAKC R+ +DD ++F M D WN
Sbjct: 64 NMYAKC------RR-------------------------MDDCQKMFRQMDSVDPVVWNI 92
Query: 122 MVSGFAQHDRFSEALGYFVKMH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
+++G + E + +F MH ++ S +F L C D G +H+ + K+
Sbjct: 93 VLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKT 151
Query: 181 RYSSDVYMGSALIDMYGKCGRV-SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEV 239
D +G+AL+ MY K G + A FD + ++++VSWN++I + +N +DA
Sbjct: 152 GLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRS 211
Query: 240 FVRMMASGIEPDEVTLASVVSACASLA---AFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
F M+ EP+ T+A+V+ CAS+ A++ G QIH+ +++ L+ + + N+LV
Sbjct: 212 FCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVS 271
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + G++ EA +F RM +++VS WN +
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVS-------------------------------WNVV 300
Query: 357 IAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
IAGY N E +AL LF L+++ V T ++L CA L DL G++ H+++++H
Sbjct: 301 IAGYASNHEWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHS 360
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
D VGN+LI Y + G F M +D +SWNA++ A + +
Sbjct: 361 YLL-----EDTSVGNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQFQ 415
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHA---GLVEEGRKYFSSMSKEHGLAPLKDHYT 532
L L + D VT++ +L C++ G V+E Y H K
Sbjct: 416 FLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLG-N 474
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL--EIE 590
++D + G ++ A + + + + V + SLL+ + G + ++L E+
Sbjct: 475 ALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSG-----YVNSGSHDDAQMLFSEMS 529
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
++ + L+ +YAE E + V + ++ RG+
Sbjct: 530 TTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGM 564
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 5/304 (1%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQF---ASEIFIQNRLIDVYAKCGCLYGA 73
LDS LL C + + + VH +K+ E + N L+D YAKCG + A
Sbjct: 430 LDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYA 489
Query: 74 RKVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
K+F +S + + T+NS+++G + G DDA LF+ M D +W+ MV +A+
Sbjct: 490 HKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFP 549
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
+EA+G F ++ + + + + L CA + Q H + + R D+ + L
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGRL-GDIRLKGTL 608
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D+Y KCG + A VF R++V + +++ Y +G +AL +F M+ S I+PD
Sbjct: 609 LDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDH 668
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
V + ++++AC ++GLQI+ + ++ + VD+ A+ G+L++A
Sbjct: 669 VFITTLLTACCHAGLIQDGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFIT 728
Query: 313 RMPI 316
+MP+
Sbjct: 729 QMPV 732
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 200/494 (40%), Gaps = 107/494 (21%)
Query: 12 GDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCL 70
GD++ LDS +L C + ++ + +H+ I++ + E + N LI YA+ G
Sbjct: 324 GDVS-LDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A F MS K++ +WN+I+ FA P++ Q N + H
Sbjct: 383 SAAYWAFSLMSMKDIISWNAILDA-------------FADSPKQFQF-LNLL------HH 422
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVY 187
F+EA+ L + S L C +VH K+ +
Sbjct: 423 LFNEAI-----------TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPK 471
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASD----------- 235
+G+AL+D Y KCG V A ++F G+ E R +V++NSL++ Y +G D
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTT 531
Query: 236 --------------------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
A+ VF + A G+ P+ VT+ +++ CA LA+ Q H
Sbjct: 532 DLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCH 591
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
++R D+ L L+D+YAKCG L A VF R++V T+MV+GYA
Sbjct: 592 GYIIRGR--LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG 649
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K A ++F+ M++ N+ P H LL AC
Sbjct: 650 KEALMIFSHMIDSNIK-------------------------------PDHVFITTLLTAC 678
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VE 454
+ +Q G Q + +R + G + + +D+ + G ++D M VE
Sbjct: 679 CHAGLIQDGLQ-----IYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVE 733
Query: 455 RDWVSWNAMIVGCA 468
+ W ++ C
Sbjct: 734 PNANIWGTLLRACT 747
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/623 (33%), Positives = 334/623 (53%), Gaps = 71/623 (11%)
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
F+ N LID+Y KC A VF + +KNVF
Sbjct: 11 FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVF---------------------------- 42
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
SW M++ FA++ F +F M + E LSAC + + +G +
Sbjct: 43 ---SWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQ 99
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ + + + +AL+ +YGK G + A VF M R++V+W++++ Y +NG
Sbjct: 100 LAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPR 159
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+AL +F +M G+ P++VTL S + ACASL + G +H R+ + +++ +V+G AL
Sbjct: 160 EALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRV-EAQGIQSGVVVGTAL 218
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V++Y KCG++ A F ++ +NV V+W+
Sbjct: 219 VNLYGKCGRIEAAAEAFGQIVEKNV-------------------------------VAWS 247
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH--THVV 412
A+ A Y +N N +A+ + + E + P TF ++L+ACA +A L+ GR+ H HV+
Sbjct: 248 AISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVL 307
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
GL ESD++V +L++MY KCG++ +F+ + D V WN++I AQ+G
Sbjct: 308 GGGL------ESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQ 361
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
+AL LF++M L G +P +T VL ACSHAG++++GRK+F S +HG+ P +H+
Sbjct: 362 TEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFG 421
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGRAG + +++ L+ MP +P V W + L AC+ +RN+ + A+ L +++P
Sbjct: 422 CMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPR 481
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
PYVLLSNMYA+ GRW +V R+R+ M+ VK+ G SWIE+ V+ F+ D HP
Sbjct: 482 KRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPR 541
Query: 653 NKEIYLVLKMLTREMKRVGYVPN 675
EI+ L+ LT+ MK GYVP+
Sbjct: 542 IGEIHAELQRLTKLMKAAGYVPD 564
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 211/446 (47%), Gaps = 71/446 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L +C ++ ++ R + I+ + E +Q L+ +Y K G
Sbjct: 82 FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLG---------------- 125
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
DA+ +F M RD +W++MV+ +A++ EALG F +M
Sbjct: 126 ---------------HCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL 170
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ A ++ + S L ACA D + G +H + S V +G+AL+++YGKCGR+
Sbjct: 171 DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEA 230
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A F + E+N+V+W+++ Y +N DA+ V RM G+ P+ T SV+ ACA+
Sbjct: 231 AAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAA 290
Query: 265 LAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+AA K+G +IH R+ + L +D+ + ALV+MY+KCG L A +FD
Sbjct: 291 IAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFD----------- 339
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
K+ ++V WN+LIA Q+G+ E+AL LF ++ E + P
Sbjct: 340 --------------------KIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQP 379
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVV-KHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T TF ++L AC++ L GR+ + HG+ E++ F ++D+ + G +
Sbjct: 380 TIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIF----PEAEHF--GCMVDLLGRAGWI 433
Query: 443 EDGCRIFETM-VERDWVSWNAMIVGC 467
D + M E V+W A + C
Sbjct: 434 VDSEDLLLHMPFEPHPVAWMAFLGAC 459
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
IRN ++ Y K A +F + +NV SW ++A + +N + + FR
Sbjct: 7 IRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRG 66
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ + + P L+AC + ++ +GR ++ G+ E + V +L+ +
Sbjct: 67 MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGI------EEESIVQTALVSL 120
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y K G D +F M RD V+W+AM+ A+NG+ EALGLF++M L G P+ VT+
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ L AC+ G + G + + G+ T +V+L G+ G ++ A +
Sbjct: 181 VSGLDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI- 238
Query: 556 MQPDAVIWGSLLAA 569
++ + V W ++ AA
Sbjct: 239 VEKNVVAWSAISAA 252
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 37/212 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARI--IKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+S+ F +LD+C ++ RR+H RI + S++++ L+++Y+KCG L A
Sbjct: 277 NSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGN 336
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FDK+++ ++ WNS+I + AQH + +A
Sbjct: 337 MFDKIAHLDLVLWNSLI-------------------------------ATNAQHGQTEKA 365
Query: 136 LGYFVKMHSENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
L F +M E + +F S L AC AG +D V + + + G ++
Sbjct: 366 LELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFG-CMV 424
Query: 194 DMYGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
D+ G+ G + + + M E + V+W + +
Sbjct: 425 DLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFL 456
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 338/649 (52%), Gaps = 86/649 (13%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C ++ +VH+ +++ FA + +I + LI++Y++CG L A++VFD+M + +V
Sbjct: 48 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 107
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+ S+I S F ++ F A ++M +
Sbjct: 108 VGYTSLI-------------------------------SAFCRNGEFELAAEALIQMLKQ 136
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSK--SRYSSDVYMGSALIDMYGKCGRVS 203
+E++ + L+AC +G Q+H L K S VY +ALID Y + G
Sbjct: 137 GLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFK 192
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A+ VFD + +N+VSW S++ Y ++G +AL+VF M++ G++P+E L+ V+ AC
Sbjct: 193 LAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG 252
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLV----LGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
S+ G Q+H C +++DL+ + NAL+ MY + G + E
Sbjct: 253 SIGL---GRQLH-----CSAIKHDLITDIRVSNALLSMYGRTGLVEELEA---------- 294
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
M K+ ++VSW I+ QNG E+A+ L + E
Sbjct: 295 ---------------------MLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 333
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P Y F ++L++CA++A L G Q H +K G +S+I GN+LI+MY KC
Sbjct: 334 GFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC------DSEICTGNALINMYSKC 387
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + F+ M D SWN++I G AQ+G +AL +F KM G KPD T +GVL
Sbjct: 388 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 447
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
C+H+G+VEEG +F M ++ P HY CM+D+LGR G DEA +I MP +PD
Sbjct: 448 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 507
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A+IW +LLA+CK+HRN+ +G+ A +L+E+ +S YVL+SN+YA G W + +VR+
Sbjct: 508 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 567
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
M + GV K GCSWIEI V+ F +D HP + IY +L L M+
Sbjct: 568 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 616
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 33/205 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ +L SC S+ + H +K SEI N LI++Y+KCG + AR FD M
Sbjct: 342 FSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH 401
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+V +WNS+I G AQH ++AL F K
Sbjct: 402 THDVTSWNSLI-------------------------------HGHAQHGDANKALEVFSK 430
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL-SKSRYSSDVYMGSALIDMYGKCG 200
M S + +F L C S + G L+ + ++ + +IDM G+ G
Sbjct: 431 MRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNG 490
Query: 201 RVSCARRVFDGMR-ERNIVSWNSLI 224
R A R+ + M E + + W +L+
Sbjct: 491 RFDEALRMINDMPFEPDALIWKTLL 515
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 346/640 (54%), Gaps = 84/640 (13%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQF--ASEIFIQ---------NRLIDVYAKCGCLY- 71
+L DS +++ R + A + + + A ++F + N ++ Y CG +
Sbjct: 78 ELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFV 137
Query: 72 -GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
AR +FD+M + +WN++++G K G +D A LF MPER+ SWN+MVSG+ +
Sbjct: 138 ERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNG 197
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG- 189
+A+ +F M + A S + +G + + +L + Y +V G
Sbjct: 198 HVEKAIEFFKLMPKRDSA-------SLRALISGLIQNDKLVEAERILLQ--YGGNVGKGD 248
Query: 190 -----SALIDMYGKCGRVSCARRVFD--------GMRERNIVSWNSLITCYEQNGPASDA 236
+ LI YG+ G AR++FD G RN++SWNS+I CY + G A
Sbjct: 249 LVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSA 308
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
E+F +M +E D + +++S
Sbjct: 309 RELFDKM----VERDTFSWNTMISG----------------------------------- 329
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + + EA +F RMP + +S M+SG+++ S+K A +F ++ E+++VSWN++
Sbjct: 330 -YVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSM 388
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+GY +N + + A+ +F ++ E P +T ++L+ACA L DL LG Q H V K +
Sbjct: 389 ISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFI 448
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTE 475
+D+ + NSL+ MY +CG++ + +F+ M ++RD +SWNAMI G A +G+ TE
Sbjct: 449 -------ADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATE 501
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
AL LF M C +P ++T I VL AC+HAGL+EEGR+ F+SM HG+ P +HY +V
Sbjct: 502 ALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALV 561
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D++GR G L+EA +LI +MP +PD +WG+LL ACKVH N+ + A+ L++++P +S
Sbjct: 562 DIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSA 621
Query: 596 PYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
PYVLL NMYA++GRW + +R +M K V K G S ++
Sbjct: 622 PYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C + ++H + K+ F +++ I N L+ +Y++CG + AR VF
Sbjct: 416 DRHTLSSILSACAGLVDLVLGTQIHQLVTKA-FIADLPINNSLVTMYSRCGAIVEARMVF 474
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D+M+ ++V +WN++I G GF +A +LF M QC
Sbjct: 475 DEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLM---KQC------------------- 512
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMG-TQVHALLSKSRYSSDVYMGSALIDM 195
N S +F S L+ACA + + G + +++++ V +AL+D+
Sbjct: 513 ---------NVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDI 563
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
G+ G++ A + + M E + W +L+
Sbjct: 564 IGRHGQLEEAMSLINSMPCEPDKAVWGALL 593
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/602 (34%), Positives = 333/602 (55%), Gaps = 32/602 (5%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
F+ N+++ K G +DDA L +RD +WNSM+S F+Q++RF EAL + M
Sbjct: 150 TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVL 209
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCGRVS 203
E +F S L AC+ + G ++HA L + ++GSAL+DMY CG+V
Sbjct: 210 EGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVE 269
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVVSAC 262
R VFD + +R I WN++I Y Q+ AL +F+ M A+G+ + T++S+V A
Sbjct: 270 SGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY 329
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
IH +++ L + L NAL+DMY++ G + ++ +FD M R++VS
Sbjct: 330 VRCEGISRKEGIHGYVIK-RGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSW 388
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGLFRLLKRESV 381
++++ Y A L+ +M S T +G+ N+E F+
Sbjct: 389 NTIITSYVICGRSSDALLLLHEMQRIEEKS--------TYDGDYNDEKQVPFK------- 433
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +L CA+L+ L G++ H + +++ L S + VG++L+DMY KCG
Sbjct: 434 -PNSITLMTVLPGCASLSALAKGKEIHAYAIRNLL------ASQVTVGSALVDMYAKCGC 486
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-----KPDHVTMI 496
+ R+F+ M R+ ++WN +I+ +G G E+L LF+ M+ G KP VT I
Sbjct: 487 LNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFI 546
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+ +CSH+G+V+EG F M EHG+ P DHY C+VDL+GRAG ++EA L+ MP
Sbjct: 547 ALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPS 606
Query: 557 QPDAV-IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
D V W SLL AC+++ NI +GE A+ LL+++P + YVLLSN+Y+ G W + +
Sbjct: 607 GFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMN 666
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+R+ M+ GV K+PGCSWIE V+ F+ D HP +++++ L+ L+ +K+ GYVP+
Sbjct: 667 LRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPD 726
Query: 676 AS 677
+
Sbjct: 727 TA 728
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/618 (26%), Positives = 284/618 (45%), Gaps = 110/618 (17%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS--EIFIQNRLIDVYAKCGCLYGARK 75
D+ F +L + + + +++HA + K + S + I N L+++Y KCG L
Sbjct: 9 DNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL----- 63
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
DA ++F + ERDQ SWNS++S + + + A
Sbjct: 64 --------------------------GDAYKVFDRITERDQVSWNSIISALCRFEEWEVA 97
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSA 191
+ F M E F S ++ S AC+ +G Q+H K + + + +A
Sbjct: 98 IKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT--FSNNA 155
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+ MY K GR+ A+ + +R++V+WNS+I+ + QN +AL M+ G++PD
Sbjct: 156 LMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPD 215
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
VT ASV+ AC+ L + G +IHA +R + + + +G+ALVDMY CG++ R VF
Sbjct: 216 GVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVF 275
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
D + R + +M++GYA++ + A ++F +M E A G
Sbjct: 276 DSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEM---------------------EAAAG 314
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
L+ T +++ A + H +V+K GL E++ ++ N+
Sbjct: 315 LY---------SNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGL------ETNRYLQNA 359
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE--- 488
LIDMY + G ++ RIF++M +RD VSWN +I G ++AL L +M E
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419
Query: 489 -------------KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
KP+ +T++ VL C+ + +G++ + + + LA + +V
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGSALV 478
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D+ + GCL+ A+ + + MP++ + + W ++ A +H K+ LE
Sbjct: 479 DMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK-------GKESLE------- 523
Query: 596 PYVLLSNMYAELGRWGEV 613
L +M AE + GEV
Sbjct: 524 ---LFEDMVAEGAKGGEV 538
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 196/405 (48%), Gaps = 74/405 (18%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D FA +L +C + + +HA +++ E F+ + L+D+Y CG + R V
Sbjct: 215 DGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLV 274
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD + ++ + W N+M++G+AQ + +AL
Sbjct: 275 FDSVLDRKIGLW-------------------------------NAMIAGYAQSEHDEKAL 303
Query: 137 GYFVKMHSENFALSEYSFGSALSA-------CAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
F++M + A YS + +S+ C G + K G +H + K ++ Y+
Sbjct: 304 MLFIEMEA---AAGLYSNATTMSSIVPAYVRCEG-ISRKEG--IHGYVIKRGLETNRYLQ 357
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM----- 244
+ALIDMY + G + ++R+FD M +R+IVSWN++IT Y G +SDAL + M
Sbjct: 358 NALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEK 417
Query: 245 -----------ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+P+ +TL +V+ CASL+A +G +IHA +R L + + +G+A
Sbjct: 418 STYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIR-NLLASQVTVGSA 476
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV--- 350
LVDMYAKCG LN AR VFD+MPIRNV++ ++ Y K + +F M+
Sbjct: 477 LVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGG 536
Query: 351 ------VSWNALIAGYTQNGENEEALGLFRLLKRE---SVCPTHY 386
V++ AL A + +G +E L LF +K E P HY
Sbjct: 537 EVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHY 581
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 211/435 (48%), Gaps = 48/435 (11%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS--DVYMGSALIDMYGKC 199
M F+ ++F + L A AG + +G Q+HA + K Y S V + + L++MYGKC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + A +VFD + ER+ VSWNS+I+ + A++ F M+ G EP TL S+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 260 SACASLAAFKEGL----QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
AC++L ++GL QIH R R NAL+ MYAK G+L++A+ +
Sbjct: 121 LACSNLRK-RDGLWLGKQIHGCCFRKGHWRT--FSNNALMAMYAKLGRLDDAKSLLVLFE 177
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
R++V+ SM+S ++QN EAL RL
Sbjct: 178 DRDLVTWNSMIS-------------------------------SFSQNERFMEALMFLRL 206
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ E V P TF ++L AC++L L+ G++ H + ++ + FVG++L+DM
Sbjct: 207 MVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALR-----TDDVIENSFVGSALVDM 261
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKM-LLCGEKPDHVT 494
Y CG VE G +F+++++R WNAMI G AQ+ + +AL LF +M G + T
Sbjct: 262 YCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATT 321
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
M ++ A + + K GL + ++D+ R G + +K + ++M
Sbjct: 322 MSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNRYLQNALIDMYSRMGDIKTSKRIFDSM 380
Query: 555 PMQPDAVIWGSLLAA 569
D V W +++ +
Sbjct: 381 E-DRDIVSWNTIITS 394
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 154/308 (50%), Gaps = 26/308 (8%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+ +++ + ++ + +R + +S +H +IK + ++QN LID+Y++ G + +++
Sbjct: 316 YSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKR 375
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+FD M ++++ +WN+IIT + G DA L M R E
Sbjct: 376 IFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEM------------------QRIEEK 417
Query: 136 LGYFVKMHSEN---FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
Y + E F + + + L CA G ++HA ++ +S V +GSAL
Sbjct: 418 STYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSAL 477
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG----- 247
+DMY KCG ++ ARRVFD M RN+++WN +I Y +G ++LE+F M+A G
Sbjct: 478 VDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGE 537
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
++P EVT ++ ++C+ EGL + ++ + +VD+ + GK+ EA
Sbjct: 538 VKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEA 597
Query: 308 RCVFDRMP 315
+ + MP
Sbjct: 598 YGLVNTMP 605
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P ++ F +L A A + +L LG+Q H HV K G G S + + N+L++MY KCG +
Sbjct: 8 PDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGY----GSFSSVTIDNTLVNMYGKCGGL 63
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
D ++F+ + ERD VSWN++I + A+ F+ ML+ G +P T++ + AC
Sbjct: 64 GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHY-----TCMVDLLGRAGCLDEAKTLIEAMPMQ 557
S+ R + HG K H+ ++ + + G LD+AK+L+ +
Sbjct: 124 SNL----RKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLL-VLFED 178
Query: 558 PDAVIWGSLLAACKVHRNIM 577
D V W S++++ + M
Sbjct: 179 RDLVTWNSMISSFSQNERFM 198
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 310/544 (56%), Gaps = 31/544 (5%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR-VSCARRVFDGM 212
++C D K Q+HA+ K+ D + +I R + AR VF M
Sbjct: 22 LSKPFTSCKTPRDLK---QLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQM 78
Query: 213 RERNIVSWNSLITCYEQNGP---ASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAF 268
E N WN+++ + S+AL +F M+ G ++P+ T SV+ ACA +
Sbjct: 79 PEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRL 138
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF----------------D 312
+EG QIH +++ ++ V+ N LV MY C + +A +F
Sbjct: 139 REGKQIHGLIVKFGFHEDEFVISN-LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDK 197
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R NVV M+ G + +KSA+ +F +M R+VVSWN +I+GY QNG EA+ L
Sbjct: 198 RKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINL 257
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F+ ++ ++ P + T ++L A A + L+LG+ H + K+ + E D +G++L
Sbjct: 258 FQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKV------EIDDVLGSAL 311
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH 492
+DMY KCGS++ ++FET+ +R+ ++W+A+I A +G +A+ F M G P+
Sbjct: 312 VDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPND 371
Query: 493 VTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIE 552
V IG+L ACSHAGLVEEGR +FS M K GL P +HY CMVDLLGRAG L+EA+ LI
Sbjct: 372 VAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIR 431
Query: 553 AMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGE 612
MP++PD VIW +LL ACK+H+N+ +GE VA+ L+E+ P +SG YV LSN+YA LG W
Sbjct: 432 NMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEA 491
Query: 613 VVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGY 672
V RVR M+ + K PGCSWIEI G ++ F+V+D H KEI +L ++ +++ GY
Sbjct: 492 VARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGY 551
Query: 673 VPNA 676
PN
Sbjct: 552 RPNT 555
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 16/311 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF---- 77
F +L +C R+ + + +++H I+K F + F+ + L+ +Y C + A +F
Sbjct: 125 FPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNV 184
Query: 78 ------------DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
+ + NV WN +I G ++ G I A LF MP R SWN M+SG
Sbjct: 185 VDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISG 244
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
+AQ+ F EA+ F +M S N + + S L A A ++G +H K++ D
Sbjct: 245 YAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEID 304
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+GSAL+DMY KCG + A +VF+ + +RN ++W+++I + +G A DA+ F M
Sbjct: 305 DVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+G+ P++V ++SAC+ +EG + +++ L+ + +VD+ + G L
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 306 EARCVFDRMPI 316
EA + MPI
Sbjct: 425 EAEELIRNMPI 435
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 223/485 (45%), Gaps = 78/485 (16%)
Query: 14 LAFLDSSPF--AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY 71
L F P +K SC K+ D +++HA IK+ IQ+ L C +
Sbjct: 12 LNFSPQPPLILSKPFTSC---KTPRDLKQLHAIFIKTGQ-----IQDPLTAAEVIKFCAF 63
Query: 72 G------ARKVFDKMSNKNVFTWNSIITGLLKWG---FIDDASRLFASM-----PERDQC 117
AR VF +M N F WN+I+ L + +A LF++M + ++
Sbjct: 64 SSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123
Query: 118 SWNSMVSGFAQHDRFSEAL---GYFVK--MHSENFALSEYSFGSALSA---------CAG 163
++ S++ A+ R E G VK H + F +S + A C
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
VDF Q+ L K + +V + + +ID + G + A+ +FD M R++VSWN +
Sbjct: 184 VVDFDGSCQME--LDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVM 241
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I+ Y QNG +A+ +F M +S I+P+ VTL SV+ A A + A + G IH + K
Sbjct: 242 ISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGK-NK 300
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ D VLG+ALVDMY+KCG +++A VF+ +P RN
Sbjct: 301 VEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRN------------------------- 335
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++W+A+I + +G E+A+ F L+ + V P + +L+AC++ ++
Sbjct: 336 ------AITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEE 389
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
GR +H+VK + G + I ++D+ + G +E+ + M +E D V W A
Sbjct: 390 GRSFFSHMVK-----VVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKA 444
Query: 463 MIVGC 467
++ C
Sbjct: 445 LLGAC 449
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 342/656 (52%), Gaps = 72/656 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ KS++ + +H I+KS F ++LID Y KC + ARK+FD+M
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMP 62
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N+++ TWN SM+S + EA+ +
Sbjct: 63 NRHIVTWN-------------------------------SMISSHVSRGKTKEAIELYDN 91
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS-SDVYMGSALIDMYGKCG 200
M E Y+F + A + + G + H L + SD ++ + ++DMY K G
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG 151
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ AR VFD + ++++V + +LI Y Q G +ALEVF M+ S I+P+E TLASV+
Sbjct: 152 KMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLV 211
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+C +L G IH +++ L + + +L+ MY+KC + ++ VF+ +
Sbjct: 212 SCGNLGDLVNGKLIHGLVVK-SGLESVVASQTSLLTMYSKCNMVEDSIKVFNSL------ 264
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
A AS V +W + I G QNG E AL +FR + R S
Sbjct: 265 ---------AYASHV----------------TWTSFIVGLVQNGREEIALSMFREMIRCS 299
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P H+TF ++L+AC++LA L+ G Q H VK G+ + + +V +LI +Y KCG
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGV------DGNKYVDAALIHLYGKCG 353
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+VE +FE++ E D VS N MI AQNG+G EAL LF++M G KP+ VT I +L
Sbjct: 354 NVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILL 413
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC++AGLVEEG + FS + H + +DHYTCM+DLLGRA +EA LIE PD
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDV 472
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
+ W +LL ACK+H + + E KK+L+ P + G ++LL+N+YA G+W V+ ++
Sbjct: 473 IQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAG 532
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R + K P SW++I V+ FM D HP EI +L L ++ +GY P+
Sbjct: 533 RDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDT 588
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 31/341 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ +VG + A +L SC + + + +H ++KS S + Q L+ +Y+KC
Sbjct: 192 EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKC 251
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
++D+ ++F S+ +W S + G
Sbjct: 252 N-------------------------------MVEDSIKVFNSLAYASHVTWTSFIVGLV 280
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
Q+ R AL F +M + + + ++F S L AC+ + G Q+HA+ K + Y
Sbjct: 281 QNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKY 340
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +ALI +YGKCG V AR VF+ + E ++VS N++I Y QNG +ALE+F RM G
Sbjct: 341 VDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLG 400
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+P+ VT S++ AC + +EG QI + + + ++D+ + + EA
Sbjct: 401 HKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA 460
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ + +V+ ++++ V+ A KML++
Sbjct: 461 AMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQ 501
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/640 (33%), Positives = 346/640 (54%), Gaps = 84/640 (13%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQF--ASEIFIQ---------NRLIDVYAKCGCLY- 71
+L DS +++ R + A + + + A ++F + N ++ Y CG +
Sbjct: 78 ELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFV 137
Query: 72 -GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
AR +FD+M + +WN++++G K G +D A LF MPER+ SWN+MVSG+ +
Sbjct: 138 ERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNG 197
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG- 189
+A+ +F M + A S + +G + + +L + Y +V G
Sbjct: 198 HVEKAIEFFKLMPKRDSA-------SLRALVSGLIQNDKLVEAERILLQ--YGGNVGKGD 248
Query: 190 -----SALIDMYGKCGRVSCARRVFD--------GMRERNIVSWNSLITCYEQNGPASDA 236
+ LI YG+ G AR++FD G RN++SWNS+I CY + G A
Sbjct: 249 LVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSA 308
Query: 237 LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
E+F +M +E D + +++S
Sbjct: 309 RELFDKM----VERDTFSWNTMISG----------------------------------- 329
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
Y + + EA +F RMP + +S M+SG+++ S+K A +F ++ E+++VSWN++
Sbjct: 330 -YVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSM 388
Query: 357 IAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL 416
I+GY +N + + A+ +F ++ E P +T ++L+ACA L DL LG Q H V K +
Sbjct: 389 ISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFI 448
Query: 417 RFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTE 475
+D+ + NSL+ MY +CG++ + +F+ M ++RD +SWNAMI G A +G+ TE
Sbjct: 449 -------ADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATE 501
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
AL LF M C +P ++T I VL AC+HAGL+EEGR+ F+SM HG+ P +HY +V
Sbjct: 502 ALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALV 561
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D++GR G L+EA +LI +MP +PD +WG+LL ACKVH N+ + A+ L++++P +S
Sbjct: 562 DIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESSA 621
Query: 596 PYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
PYVLL NMYA++GRW + +R +M K V K G S ++
Sbjct: 622 PYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRVD 661
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + +L +C + ++H + K+ F +++ I N L+ +Y++CG + AR VF
Sbjct: 416 DRHTLSSILSACAGLVDLVLGTQIHQLVTKA-FIADLPINNSLVTMYSRCGAIVEARMVF 474
Query: 78 DKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
D+M+ ++V +WN++I G GF +A +LF M QC
Sbjct: 475 DEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLM---KQC------------------- 512
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMG-TQVHALLSKSRYSSDVYMGSALIDM 195
N S +F S L+ACA + + G + +++++ V +AL+D+
Sbjct: 513 ---------NVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDI 563
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLI 224
G+ G++ A + + M E + W +L+
Sbjct: 564 IGRHGQLEEAMSLINSMPCEPDKAVWGALL 593
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 342/645 (53%), Gaps = 85/645 (13%)
Query: 31 RSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNS 90
R S++ +++HA+++K+ E F+ +LI ++ C + A VF+++ + +V +N+
Sbjct: 26 RCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNT 85
Query: 91 IITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE---ALGYFVKMHSENF 147
+I H R SE A F +M
Sbjct: 86 LIRA----------------------------------HVRNSEPLLAFSVFFEMQDSGV 111
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR--VSCA 205
+++ L AC+G V ++ +HA + K + D+++ ++LID Y KCG V+ A
Sbjct: 112 CADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAA 171
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+VF+ M ER+ VSWNS+I + G +A +F M P+
Sbjct: 172 RKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEM------PER------------- 212
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
D V N ++D Y K G++N A +F++MP RNVVS ++M
Sbjct: 213 ---------------------DTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTM 251
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
V GY+KA + AR++F KM +N+V W +I+GY + G ++A+ L+ ++ +
Sbjct: 252 VLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDD 311
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T ++L+ACA L LG++ H + + RF + V N+LIDMY KCGS+E+
Sbjct: 312 GTVISILSACAVSGLLGLGKRVHASIER--TRF----KCSTPVSNALIDMYAKCGSLENA 365
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
IF MV +D VSWNA+I G A +G+G +AL LF +M G PD VT +GVLCAC+HA
Sbjct: 366 LSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHA 425
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
G V+EG YF +M +++G+ P +HY CMVDLLGR G L EA L+ +MP++P+A+IWG+
Sbjct: 426 GFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGT 485
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL AC++H L E V +L++ E S+SG +LSN+YA G W +R M+ +
Sbjct: 486 LLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSI 545
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
K G S IE+ V+ F V D+ HP + IY + L + + ++
Sbjct: 546 QKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHINKL 590
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 215/476 (45%), Gaps = 91/476 (19%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC--LYGARK 75
D+ + LL +C V +HA++ K F +IF+ N LID Y KCG + ARK
Sbjct: 114 DNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARK 173
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
VF+ M+ ++ +WNS+I GL+K G + +A RLF MPERD SWN+++ G+ + + A
Sbjct: 174 VFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAA 233
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
F KM + N V S ++
Sbjct: 234 FELFEKMPARN---------------------------------------VVSWSTMVLG 254
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G + AR +FD M +N+V W +I+ Y + G A DA+ ++ +M +G++ D+ T+
Sbjct: 255 YSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTV 314
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S++SACA G ++HA + R + + + NAL+DMYAKCG L A +F M
Sbjct: 315 ISILSACAVSGLLGLGKRVHASIERT-RFKCSTPVSNALIDMYAKCGSLENALSIFHGMV 373
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
++VVS WNA+I G +G E+AL LF
Sbjct: 374 RKDVVS-------------------------------WNAIIQGLAMHGHGEKALQLFSR 402
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS---- 431
+K E P TF +L AC H V GL + E D V
Sbjct: 403 MKGEGFVPDKVTFVGVLCAC-----------THAGFVDEGLHYFHAMERDYGVPPEVEHY 451
Query: 432 --LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKML 484
++D+ + G +++ R+ +M +E + + W ++ C + A +F +++
Sbjct: 452 GCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLV 507
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 346/635 (54%), Gaps = 70/635 (11%)
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
I + + G L A +F +M +KN +W +++T + G I A ++F MP+R S+N
Sbjct: 38 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYN 97
Query: 121 SMVSGFAQHDR--FSEALGYFVKMHSENFALSEYSFGSALSACAGSVD----FKMGTQV- 173
+M++ + + + EA F +M N ++S + + L A AG VD + T V
Sbjct: 98 AMITAYTRSNPMMIGEASKLFAEMRERN-SISYAAMITGL-ARAGMVDNAEELYLETPVE 155
Query: 174 -------HALLS---------------KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+AL+S + DV S+++D Y K G++ AR +F+
Sbjct: 156 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 215
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKE 270
M ERN+V+W ++I + + G +F+RM G ++ + TL + AC+ +KE
Sbjct: 216 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 275
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G+Q+H + R D+ LGNA++ MY + + EAR +FD M ++VVS ++++GY
Sbjct: 276 GIQMHGLVSRM-GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 334
Query: 331 KASSVKSARLMFTKMLERNVVSWN-------------------------------ALIAG 359
+ V+ ++F K +++V+SW A+I+G
Sbjct: 335 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 394
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ NGE EEA+ F + R+ V P T ++L+A A LA L G Q HT VVK G+ F
Sbjct: 395 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEF- 453
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
D+ + NSL+ MY KCG+V DG +IF ++ + VS+N+MI G AQNG+G EAL L
Sbjct: 454 -----DLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALEL 508
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F KML G+KP+ +T +GVL AC+H GL+E+G YF SM + + P HY C+VDLLG
Sbjct: 509 FHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLG 568
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
RAG LD+A LI +MP +P + +WG+LL A ++H + + + A+++ ++EP N+ PY +
Sbjct: 569 RAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAV 628
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
LS +Y+ GR + +VR +GV K G SWI
Sbjct: 629 LSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 663
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 163/330 (49%), Gaps = 31/330 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + + ++C + ++H + + F ++F+ N +I +Y + + ARK+
Sbjct: 255 VNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKI 314
Query: 77 FDKMSNKNVFTWNSIITG---------------------LLKW----------GFIDDAS 105
FD M+ K+V +WN++I G ++ W G + +
Sbjct: 315 FDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSI 374
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
LF MP++D +W +++SGF + + EA+ +F++M + + + S LSA AG
Sbjct: 375 ELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLA 434
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
G Q+H L+ K D+ + ++L+ MY KCG V+ ++F + NIVS+NS+IT
Sbjct: 435 TLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMIT 494
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ QNG +ALE+F +M+ G +P+E+T V+SAC + ++G + ++
Sbjct: 495 GFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIE 554
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+VD+ + G L++A + MP
Sbjct: 555 PGPHHYACIVDLLGRAGFLDDAIDLIRSMP 584
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 134/429 (31%)
Query: 43 ARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFID 102
RI + ++ + ++D Y K G + AR++F++M +NV TW ++I G +K G
Sbjct: 179 TRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMG--- 235
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA-LSEYSFGSALSAC 161
C + G F++M E F ++ + AC
Sbjct: 236 --------------C--------------YEVGFGLFLRMRKEGFVKVNPTTLTVMFEAC 267
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
+ ++K G Q+H L+S+ + DV++G+A+I MY + V AR++FD M +++VSWN
Sbjct: 268 SEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWN 327
Query: 222 SLITCYEQN-------------------------------GPASDALEVFVRMMASGIEP 250
+LI Y QN G ++E+F RMM +
Sbjct: 328 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELF-RMMP---KQ 383
Query: 251 DEVTLASVVS-----------------------------------ACASLAAFKEGLQIH 275
D++ +V+S A A LA +GLQIH
Sbjct: 384 DDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIH 443
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + DL + N+LV MY KCG + + +F + N+VS SM++G+A
Sbjct: 444 TLVVKM-GMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFA----- 497
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
QNG EEAL LF + E P TF +L+AC
Sbjct: 498 --------------------------QNGFGEEALELFHKMLNEGQKPNEITFLGVLSAC 531
Query: 396 ANLADLQLG 404
++ L+ G
Sbjct: 532 THVGLLEQG 540
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
LV ++ + + + G L EA +F RMP +N +S T+M++ Y + + AR MF KM +
Sbjct: 31 LVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQ 90
Query: 348 RNVVSWNALIAGYTQNGEN--EEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLG 404
R S+NA+I YT++ EA LF + +R S+ ++ ++ A +
Sbjct: 91 RTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSI-----SYAAMITGLARAGMVDNA 145
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ + E D N+LI Y+K G +E+ RIFE M ERD +SW++M+
Sbjct: 146 EELYLET--------PVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV 197
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
G + G A LF++M + + VT ++ G E G F M KE
Sbjct: 198 DGYCKKGKIGHARELFERM----PERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKE 250
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/635 (34%), Positives = 346/635 (54%), Gaps = 70/635 (11%)
Query: 61 IDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWN 120
I + + G L A +F +M +KN +W +++T + G I A ++F MP+R S+N
Sbjct: 117 ITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTASYN 176
Query: 121 SMVSGFAQHDR--FSEALGYFVKMHSENFALSEYSFGSALSACAGSVD----FKMGTQV- 173
+M++ + + + EA F +M N ++S + + L A AG VD + T V
Sbjct: 177 AMITAYTRSNPMMIGEASKLFAEMRERN-SISYAAMITGL-ARAGMVDNAEELYLETPVE 234
Query: 174 -------HALLS---------------KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
+AL+S + DV S+++D Y K G++ AR +F+
Sbjct: 235 WRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFER 294
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKE 270
M ERN+V+W ++I + + G +F+RM G ++ + TL + AC+ +KE
Sbjct: 295 MPERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSEFGEYKE 354
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G+Q+H + R D+ LGNA++ MY + + EAR +FD M ++VVS ++++GY
Sbjct: 355 GIQMHGLVSRM-GFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNALIAGYV 413
Query: 331 KASSVKSARLMFTKMLERNVVSWN-------------------------------ALIAG 359
+ V+ ++F K +++V+SW A+I+G
Sbjct: 414 QNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWTAVISG 473
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
+ NGE EEA+ F + R+ V P T ++L+A A LA L G Q HT VVK G+ F
Sbjct: 474 FVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEF- 532
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
D+ + NSL+ MY KCG+V DG +IF ++ + VS+N+MI G AQNG+G EAL L
Sbjct: 533 -----DLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALEL 587
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F KML G+KP+ +T +GVL AC+H GL+E+G YF SM + + P HY C+VDLLG
Sbjct: 588 FHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLG 647
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
RAG LD+A LI +MP +P + +WG+LL A ++H + + + A+++ ++EP N+ PY +
Sbjct: 648 RAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAV 707
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
LS +Y+ GR + +VR +GV K G SWI
Sbjct: 708 LSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWI 742
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 163/330 (49%), Gaps = 31/330 (9%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
++ + + ++C + ++H + + F ++F+ N +I +Y + + ARK+
Sbjct: 334 VNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKI 393
Query: 77 FDKMSNKNVFTWNSIITG---------------------LLKW----------GFIDDAS 105
FD M+ K+V +WN++I G ++ W G + +
Sbjct: 394 FDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSI 453
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
LF MP++D +W +++SGF + + EA+ +F++M + + + S LSA AG
Sbjct: 454 ELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLA 513
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
G Q+H L+ K D+ + ++L+ MY KCG V+ ++F + NIVS+NS+IT
Sbjct: 514 TLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMIT 573
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+ QNG +ALE+F +M+ G +P+E+T V+SAC + ++G + ++
Sbjct: 574 GFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIE 633
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+VD+ + G L++A + MP
Sbjct: 634 PGPHHYACIVDLLGRAGFLDDAIDLIRSMP 663
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 134/429 (31%)
Query: 43 ARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFID 102
RI + ++ + ++D Y K G + AR++F++M +NV TW ++I G +K G
Sbjct: 258 TRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMG--- 314
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA-LSEYSFGSALSAC 161
C + G F++M E F ++ + AC
Sbjct: 315 --------------C--------------YEVGFGLFLRMRKEGFVKVNPTTLTVMFEAC 346
Query: 162 AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN 221
+ ++K G Q+H L+S+ + DV++G+A+I MY + V AR++FD M +++VSWN
Sbjct: 347 SEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWN 406
Query: 222 SLITCYEQN-------------------------------GPASDALEVFVRMMASGIEP 250
+LI Y QN G ++E+F RMM +
Sbjct: 407 ALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELF-RMMP---KQ 462
Query: 251 DEVTLASVVS-----------------------------------ACASLAAFKEGLQIH 275
D++ +V+S A A LA +GLQIH
Sbjct: 463 DDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIH 522
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + DL + N+LV MY KCG + + +F + N+VS SM++G+A
Sbjct: 523 TLVVKM-GMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFA----- 576
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
QNG EEAL LF + E P TF +L+AC
Sbjct: 577 --------------------------QNGFGEEALELFHKMLNEGQKPNEITFLGVLSAC 610
Query: 396 ANLADLQLG 404
++ L+ G
Sbjct: 611 THVGLLEQG 619
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 113/237 (47%), Gaps = 20/237 (8%)
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
LV ++ + + + G L EA +F RMP +N +S T+M++ Y + + AR MF KM +
Sbjct: 110 LVHCHSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQ 169
Query: 348 RNVVSWNALIAGYTQNGEN--EEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLG 404
R S+NA+I YT++ EA LF + +R S+ ++ ++ A +
Sbjct: 170 RTTASYNAMITAYTRSNPMMIGEASKLFAEMRERNSI-----SYAAMITGLARAGMVDNA 224
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
+ + E D N+LI Y+K G +E+ RIFE M ERD +SW++M+
Sbjct: 225 EELYLET--------PVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMV 276
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
G + G A LF++M + + VT ++ G E G F M KE
Sbjct: 277 DGYCKKGKIGHARELFERM----PERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKE 329
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/503 (37%), Positives = 305/503 (60%), Gaps = 10/503 (1%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDM-YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
++HA L K+ + D S ++ G ++ A VF +R N+ WN++I + Q+
Sbjct: 14 KIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQS 73
Query: 231 GPASDALEVFVRMM--ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
+A+ +F+ MM + +P +T SV A A L EG Q+H R+++ L ND
Sbjct: 74 STPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKL-GLENDQ 132
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+ N +++MY CG L EA+ +FD +VV+ +M+ G AK + +R +F KML R
Sbjct: 133 FIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLR 192
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
N VSWN++I+GY + G EA+ LF ++ E + P+ +T +LLNACA L L+ G H
Sbjct: 193 NTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIH 252
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
++VK+ S V ++IDMY KCGS++ ++F++ ++ WN++I+G A
Sbjct: 253 DYIVKNNFALNS------IVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLA 306
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G G EA+ LF K+ KPDHV+ IGVL AC+HAG+V+ + YF MS+ + + P
Sbjct: 307 MSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSI 366
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
HY+CMVD+LGRAG L+EA+ LI++MP+ PDA+IWGSLL++C+ + NI + + AK++ E
Sbjct: 367 KHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNE 426
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++P+ S ++LLSN+YA + E + R ++++ + K+PGCS IE+ G V+ F+ +
Sbjct: 427 LDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGGR 486
Query: 649 RHPLNKEIYLVLKMLTREMKRVG 671
HP +K+IY L L +K +G
Sbjct: 487 LHPRSKDIYHALDDLGLTLKEMG 509
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 153/277 (55%)
Query: 40 RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWG 99
++H R+IK ++ FIQN ++++Y CG L A+++FD + +V TWN++I GL K G
Sbjct: 118 QLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCG 177
Query: 100 FIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALS 159
ID + RLF M R+ SWNSM+SG+ + RF EA+ F +M E SE++ S L+
Sbjct: 178 EIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLN 237
Query: 160 ACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
ACA + G +H + K+ ++ + + +A+IDMY KCG + A +VF ++ +
Sbjct: 238 ACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSC 297
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WNSLI +G ++A+ +F ++ +S ++PD V+ V++AC +
Sbjct: 298 WNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMS 357
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
K+ + + +VD+ + G L EA + MP+
Sbjct: 358 ETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPV 394
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 212/456 (46%), Gaps = 69/456 (15%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDV-YAKCGCLYGARKVFDKMSNKNVFTWNSII 92
S+ D +++HA++IK+ A + +R++ + G + A VF ++ N N+F WN+II
Sbjct: 8 SMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTII 67
Query: 93 TGLLKWGFIDDASRLFASM--------PERDQCSWNSMVSGFAQHDRFSEAL---GYFVK 141
G + +A LF M P+R ++ S+ +AQ E G +K
Sbjct: 68 RGFSQSSTPHNAISLFIDMMFTSPTTQPQR--LTYPSVFKAYAQLGLAHEGAQLHGRVIK 125
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ EN + + + C +G + + DV + +I KCG
Sbjct: 126 LGLENDQFIQNTILNMYVNCGF-----LGEAQRIFDGATGF--DVVTWNTMIIGLAKCGE 178
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ +RR+FD M RN VSWNS+I+ Y + G +A+E+F RM GI+P E T+ S+++A
Sbjct: 179 IDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNA 238
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L A ++G IH +++ N +V+ A++DMY+KCG +++A VF P
Sbjct: 239 CACLGALRQGEWIHDYIVKNNFALNSIVI-TAIIDMYSKCGSIDKALQVFKSAP------ 291
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
++ + WN+LI G +G EA+ LF L+ ++
Sbjct: 292 -------------------------KKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNL 326
Query: 382 CPTHYTFGNLLNACANLADLQLGRQ-----AHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
P H +F +L AC + + + + T+ ++ ++ S ++D+
Sbjct: 327 KPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYS----------CMVDVL 376
Query: 437 MKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ G +E+ + ++M V D + W +++ C + G
Sbjct: 377 GRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYG 412
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
LL++C ++ +H I+K+ FA + +ID+Y+KCG + A +VF K
Sbjct: 235 LLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKG 294
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ WNS+I GL G ++A RLF+ K+ S
Sbjct: 295 LSCWNSLILGLAMSGRGNEAVRLFS-------------------------------KLES 323
Query: 145 ENFALSEYSFGSALSAC--AGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGR 201
N SF L+AC AG VD L+S++ + + S ++D+ G+ G
Sbjct: 324 SNLKPDHVSFIGVLTACNHAGMVD--RAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGL 381
Query: 202 VSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE----VTLA 256
+ A + M + + W SL++ + G A + R+ + ++P+E + L+
Sbjct: 382 LEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRV--NELDPNESSSFILLS 439
Query: 257 SVVSA 261
+V +A
Sbjct: 440 NVYAA 444
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 317/556 (57%), Gaps = 38/556 (6%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS-EALGYFV 140
N + WN +++ LK+G I A +LF +MP RD S+N+M+S +++ + + +G +
Sbjct: 91 NGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYS 150
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM E+ + +F + AC G + ++ HA + SS+ ++GS+L+D Y K
Sbjct: 151 KMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQM 210
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A + F+ + E ++VSWN +I +N A+ +F +M+ + D TL S++
Sbjct: 211 KLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIK 270
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
C+ K G+Q H ++ L ++ + NAL+ MY+KC K
Sbjct: 271 TCSKPGDLKHGMQFHGSAIKL-GLAHETPIYNALITMYSKCEK----------------- 312
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
AS VK +F + E N++SW A+I+G+ QN +NEEA+GLF+ + R
Sbjct: 313 ---------GVASPVK----IFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLG 359
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V ++F ++L NLA+L+ G+Q H ++K D+ V N+LIDMY KCG
Sbjct: 360 VRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGL------DLSVNNALIDMYSKCG 413
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
S+ED +F M + D VS MI+ Q+G G EAL + +M G PD VT +G L
Sbjct: 414 SLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLY 473
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
ACSH GLVEEG + F M ++H L P ++H+ C+VD+LGRAG L+EA+ I+ M ++ D
Sbjct: 474 ACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDV 533
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
++W +LL AC+VH ++LGE A+K++E++P GPYVLL+N+YAE G W + V VR+ +
Sbjct: 534 LVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKL 593
Query: 621 RKRGVVKQPGCSWIEI 636
G+ KQ GCSW+ +
Sbjct: 594 VSHGLKKQVGCSWVAL 609
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 200/412 (48%), Gaps = 41/412 (9%)
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
++ + + F L C + D + G VH L K + + + + L+ +Y K G +
Sbjct: 53 DDHSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHH 112
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNG-PASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++FD M R++VS+N++I+ +N A D + ++ +M ++P+ +T A ++ AC
Sbjct: 113 AHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACD 172
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
L A + HA +RC N+ V G++LVD YAK KL +A F+ + ++VS
Sbjct: 173 GLIALRLRGIFHAHTVRCGLSSNEFV-GSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWN 231
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
M+ G A+ +S + A MF++ML+ NV + G
Sbjct: 232 IMIDGCARNNSKEHAVRMFSQMLKGNV-----RVDG------------------------ 262
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC-GSV 442
+T +++ C+ DL+ G Q H +K GL E+ I+ N+LI MY KC V
Sbjct: 263 --FTLTSIIKTCSKPGDLKHGMQFHGSAIKLGL----AHETPIY--NALITMYSKCEKGV 314
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+IF ++ E + +SW AMI G QN EA+GLFK+ML G + + + +L
Sbjct: 315 ASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVY 374
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +E+G++ + + K L + ++D+ + G L++A + M
Sbjct: 375 GNLANLEQGKQIHARIIKSWFGLDLSVN-NALIDMYSKCGSLEDAHLVFMKM 425
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 205/453 (45%), Gaps = 72/453 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA L+ +C ++ HA ++ +S F+ + L+D YAK L A K F+++
Sbjct: 164 FAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIM 223
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ +WN +I G + + A R+F+ M + N V GF
Sbjct: 224 ELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKG-----NVRVDGF--------------- 263
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ S + C+ D K G Q H K + + + +ALI MY KC +
Sbjct: 264 -----------TLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEK 312
Query: 202 -VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
V+ ++F + E NI+SW ++I+ + QN +A+ +F M+ G+ ++ + +S++
Sbjct: 313 GVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILP 372
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+LA ++G QIHAR+++ DL + NAL+DMY+KCG L +A VF +M +VV
Sbjct: 373 VYGNLANLEQGKQIHARIIK-SWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVV 431
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S T+M I Y Q+G+ +EAL + +K E
Sbjct: 432 SCTTM-------------------------------IMSYGQHGKGKEALEILAEMKSEG 460
Query: 381 VCPTHYTFGNLLNACANLADLQLG-RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P TF L AC++ ++ G R + H L+ + + F ++DM +
Sbjct: 461 LVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLK----PKREHFA--CVVDMLGRA 514
Query: 440 GSVEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
G + + + M +E D + W ++ C +G
Sbjct: 515 GRLNEAENFIDEMGIESDVLVWETLLGACRVHG 547
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
+ F +L C + DL+ G HT++VK + I + N L+ +Y+K G +
Sbjct: 60 HQFSQILQECTDAGDLRTGMSVHTYLVKLNINGF------ILIWNKLLSLYLKFGHIHHA 113
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGY-GTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
++F+TM RD VS+N MI +N Y + +GL+ KM KP+H+T G++ AC
Sbjct: 114 HQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACD- 172
Query: 505 AGLVE-EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
GL+ R F + + GL+ + + +VD + L++A + M+ D V W
Sbjct: 173 -GLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEI-MELDLVSW 230
Query: 564 GSLLAAC 570
++ C
Sbjct: 231 NIMIDGC 237
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 320/601 (53%), Gaps = 78/601 (12%)
Query: 123 VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
V Q R EA+ +H + S + + ++AC ++G +VHA S +
Sbjct: 62 VDVLCQQKRVKEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNF 118
Query: 183 SSDVYMGSALIDMYGKCG-------------------------------RVSCARRVFDG 211
V++ + L+DMY KCG R+ AR++FD
Sbjct: 119 VPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDE 178
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVF-VRMMASGIEPDEVTLASVVSACASLAAFKE 270
M +R+ SWN+ I+ Y + +ALE+F V ++ TL+S ++A A++ +
Sbjct: 179 MPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G +IH L+R E L D V+ +AL+D+Y KCG L+EA
Sbjct: 239 GKEIHGYLIRTE-LNLDEVVWSALLDLYGKCGSLDEA----------------------- 274
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
R +F +M +R+VVSW +I ++G EE LFR L + V P YTF
Sbjct: 275 --------RGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAG 326
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+LNACA+ A LG++ H G +G + F ++L+ MY KCG+ R+F
Sbjct: 327 VLNACADHAAEHLGKEVH------GYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFN 380
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M + D VSW ++IVG AQNG EAL F+ +L G KPD VT +GVL AC+HAGLV++
Sbjct: 381 EMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDK 440
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G +YF S+ ++HGL DHY C++DLL R+G EA+ +I+ MP++PD +W SLL C
Sbjct: 441 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGC 500
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
++H N+ L + AK L EIEP N Y+ L+N+YA G W EV VRK M G+VK+PG
Sbjct: 501 RIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPG 560
Query: 631 CSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-----DDEAYEEQ 685
SWIEI V+VF+V D HP +I+ L L++++K GYVP+ + +E +EQ
Sbjct: 561 KSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQ 620
Query: 686 N 686
N
Sbjct: 621 N 621
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 271/518 (52%), Gaps = 48/518 (9%)
Query: 1 MATQRSVKQIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFI 56
+ Q+ VK+ V L D P ++ L+ +C+R +++ RRVHA S F +FI
Sbjct: 65 LCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFI 124
Query: 57 QNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQ 116
NRL+D+YAKCG L A+ +FD+M ++++ +WN++I G K G ++ A +LF MP+RD
Sbjct: 125 SNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDN 184
Query: 117 CSWNSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
SWN+ +SG+ H++ EAL F V E + ++++ SAL+A A ++G ++H
Sbjct: 185 FSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHG 244
Query: 176 LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI-TCYEQNGPAS 234
L ++ + D + SAL+D+YGKCG + AR +FD M++R++VSW ++I C+E +G
Sbjct: 245 YLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE-DGRRE 303
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
+ +F +M SG+ P+E T A V++ACA AA G ++H +M + +AL
Sbjct: 304 EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAI-SAL 362
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
V MY+KCG AR VF+ M ++VS TS++ GYA
Sbjct: 363 VHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYA------------------------ 398
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVK 413
QNG+ +EAL F LL + P T+ +L+AC + + G + H+ K
Sbjct: 399 -------QNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGY 472
HGL + + +ID+ + G ++ I + M V+ D W +++ GC +G
Sbjct: 452 HGLMHTADHYA------CVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG- 504
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
E K L E + T I + ++AGL E
Sbjct: 505 NLELAKRAAKALYEIEPENPATYITLANIYANAGLWSE 542
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 305/526 (57%), Gaps = 14/526 (2%)
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI----DMYGKCGRVSCARRVFDGM 212
+L C+ K+ +HA + ++ DV+ S LI D + A R+F +
Sbjct: 23 SLETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ N+ +N++I + + A +V+ G+ PD +T +V +C L G
Sbjct: 80 QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q H +++ D+ + N+LV MYA G A +F RM +VVS TSM+ G+ K
Sbjct: 140 QAHGHIIK-HGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
V+SAR +F +M E+N+V+W+ +I+GY QN ++A+ LF++L+ + V +++
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
++CA+L L+LG +AH +VVK+G+ ++ +G +L+DMY +CGS++ +FE +
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTL------NLILGTALVDMYARCGSIDKAVWVFEDL 312
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
ERD +SW A+I G A +GY +L F M+ G P +T VL ACSH GLVE G
Sbjct: 313 PERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGF 372
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ F SM ++H + P +HY CMVDLLGRAG L+EA+ + MP++P+A +WG+LL AC++
Sbjct: 373 QIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRI 432
Query: 573 HRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
H+N +GE V K L+++ P +SG YVLLSN+YA W +V +R++M+ +G+ K PG S
Sbjct: 433 HKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHS 492
Query: 633 WIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
IE+ G V+ F + D HP +I + + + ++ GY N +D
Sbjct: 493 LIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTAD 538
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 168/300 (56%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F L+ SC + +S + H IIK F ++++QN L+ +YA G A +F
Sbjct: 118 DNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+M +V +W S+I G K G ++ A +LF MPE++ +W++M+SG+AQ++ F +A+
Sbjct: 178 QRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVE 237
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F + S+ +E S +S+CA ++G + H + K+ + ++ +G+AL+DMY
Sbjct: 238 LFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYA 297
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A VF+ + ER+ +SW +LI +G + +L+ F M+ +G+ P ++T +
Sbjct: 298 RCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTA 357
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ + G QI + R ++ L +VD+ + GKL EA +MP++
Sbjct: 358 VLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK 417
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 235/559 (42%), Gaps = 127/559 (22%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLI----DVYAKCGCLYGARKVFDKMS 81
L++C ++ + +HA +I++ ++F +RLI D + + A ++F ++
Sbjct: 24 LETC---SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
N N+F +N++I G SG D +A ++V+
Sbjct: 81 NPNLFIFNAMIRGH----------------------------SGSKNPD---QAFHFYVQ 109
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG---- 197
+ +F + +C MG+Q H + K + DVY+ ++L+ MY
Sbjct: 110 SQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGD 169
Query: 198 ---------------------------KCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
KCG V AR++FD M E+N+V+W+++I+ Y QN
Sbjct: 170 TEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQN 229
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
A+E+F + + G+ +E + SV+S+CA L A + G + H +++ + +L+L
Sbjct: 230 NHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVK-NGMTLNLIL 288
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
G ALVDMYA+CG +++A VF+ +P R+ +S
Sbjct: 289 GTALVDMYARCGSIDKAVWVFEDLPERDTLS----------------------------- 319
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
W ALIAG +G +E +L F + + P TF +L+AC +H
Sbjct: 320 --WTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSAC-----------SHGG 366
Query: 411 VVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCR-IFETMVERDWVSWNAM 463
+V+ G + + D V L +D+ + G +E+ R + + V+ + W A+
Sbjct: 367 LVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGAL 426
Query: 464 IVGC--AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE 521
+ C +N E +G LL +V + + V E R+ M K
Sbjct: 427 LGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQ----MMKA 482
Query: 522 HGLAPLKDHYTCMVDLLGR 540
GL H +++L GR
Sbjct: 483 KGLKKPPGH--SLIELDGR 499
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 302/528 (57%), Gaps = 39/528 (7%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
S + + S L +C S G Q+H L S D + + L+D+Y CG V ARR+F
Sbjct: 61 SYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF 120
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
DGM +RN+ WN LI Y ++GP A++++ M+ G+EPD T + ACA+L +
Sbjct: 121 DGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLE 180
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
G ++H R++ D+ + LVDMYAKCG CV D
Sbjct: 181 TGREVHERVLGTH-WGEDMFVCAGLVDMYAKCG------CVDD----------------- 216
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
AR +F ++ R+ V WN++IA Y QNG EAL L R + V PT T
Sbjct: 217 --------ARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLV 268
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
+ ++A A+ A L GR+ H G + G + + SL+DMY K G V+ +F
Sbjct: 269 STISAAADAAALPRGRELH------GFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLF 322
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLV 508
E +++R+ VSWNAMI G +G+ EAL LF KM + + PD++T +GVL AC+H G+V
Sbjct: 323 EQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMV 382
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+E +++F M + + P H+TC+VD+LG AG +EA LI+ MPMQPD+ IWG+LL
Sbjct: 383 KEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLN 442
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
CK+H+N+ LGE +KL+E+EP ++G YVLLSN+YA+ G+W + RVRKLM RG+ K
Sbjct: 443 GCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKI 502
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
GCSWIE+ G + F+V D HP + EIY L+ L M GY+P+
Sbjct: 503 IGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDT 550
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 219/493 (44%), Gaps = 86/493 (17%)
Query: 19 SSP-----FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
SSP + +L SC+ S+S+ R++H R++ S + + +L+D+YA CG
Sbjct: 57 SSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACG----- 111
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
+ A RLF MP+R+ WN ++ +A+
Sbjct: 112 --------------------------LVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHE 145
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
A+ + M +++ AL ACA +D + G +VH + + + D+++ + L+
Sbjct: 146 VAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLV 205
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
DMY KCG V AR VFD +R R+ V WNS+I Y QNG +AL + M A+G+ P
Sbjct: 206 DMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIA 265
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
TL S +SA A AA G ++H R R D L +LVDMYAK G + AR +F++
Sbjct: 266 TLVSTISAAADAAALPRGRELHGFGWRRGFDRQD-KLKTSLVDMYAKSGWVQVARVLFEQ 324
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKM-LERNVVSWNALIAGY----TQNGENEE 368
+ R +VS +M+ GY A +F KM +E V N G G +E
Sbjct: 325 LMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKE 384
Query: 369 ALGLFRLL-KRESVCPT--HYT------------------------------FGNLLNAC 395
A F L+ S+ PT H+T +G LLN C
Sbjct: 385 AKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGC 444
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
+++LG A +++ L E++ +V L ++Y + G E R+ + M R
Sbjct: 445 KIHKNVELGELALQKLIE-----LEPEDAGNYV--LLSNIYAQSGKWEKAARVRKLMTNR 497
Query: 456 DWVSWNAMIVGCA 468
I+GC+
Sbjct: 498 GL----KKIIGCS 506
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/550 (35%), Positives = 316/550 (57%), Gaps = 15/550 (2%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L +C K+ +HA L ++ DV+ S LI + + A +VF ++
Sbjct: 20 SFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNP 76
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+ +NS I + + + +V+ +G+ PD +T +V AC + G+Q H
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++R +D+ + N+LV MY+ G + A VF R+ +VVS TSMV+GY K+ V
Sbjct: 137 GQIIR-HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDV 195
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
SAR +F KM E+N+V+W+ +I+GY +N ++A+ L+ LL+ E V +++ +C
Sbjct: 196 TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASC 255
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+L L+LG +AH +++++ + ++ +G +L+DMY +CGS++ +F+ + R
Sbjct: 256 AHLGALELGERAHDYILRNKMTV------NLILGTALVDMYARCGSIDKAIWVFDQLPGR 309
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +SW +I G A +GY +AL F +M G P +T VL ACSH GLVE G + F
Sbjct: 310 DALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELF 369
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
SM +++ + P +HY CMVDLLGRAG L EA+ + MPM+P+A IWG+LL AC++H+N
Sbjct: 370 ESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKN 429
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E K L+E++P +SG YVLLSN+YA +W V +R++M++RGVVK PG + E
Sbjct: 430 SEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFE 489
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD-----DEAYEEQNGSNS 690
+ G V+ F + DK HP ++I + + + +++ GY N D DE +E N
Sbjct: 490 MDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRH 549
Query: 691 TSDCQIDFQV 700
+ I + +
Sbjct: 550 SEKLAIAYAI 559
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 172/300 (57%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + L+ +C + S+ + H +II+ F S++++QN L+ +Y+ G + A VF
Sbjct: 112 DNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVF 171
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++S +V +W S++ G +K G + A +LF MPE++ +W+ M+SG+A++ F +A+
Sbjct: 172 RRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIE 231
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + SE +E S +++CA ++G + H + +++ + ++ +G+AL+DMY
Sbjct: 232 LYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYA 291
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A VFD + R+ +SW +LI + +G A ALE F RM +G+ P E+T +
Sbjct: 292 RCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTA 351
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+SAC+ + GL++ + R ++ L +VD+ + GKL EA + MP++
Sbjct: 352 VLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMK 411
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 200/422 (47%), Gaps = 74/422 (17%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+P L+SC ++S + +HA +I++ ++F + LI + L A +VF +
Sbjct: 16 NPKLSFLESC---TTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQ 72
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ N N+F +NS I G SG D+ + ++
Sbjct: 73 IQNPNLFIYNSFIRGF----------------------------SGSKDPDK---SFHFY 101
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V+ ++ + AC MG Q H + + + SDVY+ ++L+ MY
Sbjct: 102 VQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTL 161
Query: 200 G----------RVSC---------------------ARRVFDGMRERNIVSWNSLITCYE 228
G R+SC AR++FD M E+N+V+W+ +I+ Y
Sbjct: 162 GDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYA 221
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
+N A+E++ + + G+ +E + SV+++CA L A + G + H ++R K+ +L
Sbjct: 222 KNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILR-NKMTVNL 280
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM--- 345
+LG ALVDMYA+CG +++A VFD++P R+ +S T++++G+A + A F++M
Sbjct: 281 ILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKA 340
Query: 346 -LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPTHYTFG---NLLNACANLAD 400
L +++ A+++ + G E L LF +KR+ + P +G +LL LA+
Sbjct: 341 GLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAE 400
Query: 401 LQ 402
+
Sbjct: 401 AE 402
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 301/547 (55%), Gaps = 46/547 (8%)
Query: 166 DFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLI 224
D K ++H+ +L + +G L+ Y CG R +FD + ++N+V +N +I
Sbjct: 50 DAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 225 TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKL 284
Y NG DAL VF M G PD T V+ AC+ GLQIH +++ L
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKL-GL 168
Query: 285 RNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA------ 338
+L +GN LV MY KC L+ AR V D MP R++VS SMV+GYA+ A
Sbjct: 169 DMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCRE 228
Query: 339 -------------------------------RLMFTKMLERNVVSWNALIAGYTQNGENE 367
+ MF K+ E++++SWN +IA Y N
Sbjct: 229 MEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPN 288
Query: 368 EALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
EA+ L+ ++ V P + ++L AC +L+ LGR+ H +V + LR ++
Sbjct: 289 EAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLR------PNLL 342
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+ N+LIDMY KCG +++ +F+ M+ RD VSW +MI +G G +A+ LFKKM G
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
PD + + VL ACSHAGLV+EGR F+ M+ E+G+ P +HY CMVDLLGRAG +DEA
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEA 461
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L MPM+P+ +WGSLL+AC+V+ ++ + A L ++ P SG YVLLSN+YA+
Sbjct: 462 YHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKA 521
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
GRW +V VR +M +G+ K PG S +EI HV F+ D+ H +KEIY L +L M
Sbjct: 522 GRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRM 581
Query: 668 KRVGYVP 674
K +GY+P
Sbjct: 582 KELGYMP 588
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 221/492 (44%), Gaps = 91/492 (18%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDVYAKCGCLYGAR 74
LD +P AK L +++H++I+ Q + +L+ YA CG R
Sbjct: 44 ILDVNPDAKTL------------KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTR 91
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD++++KNV +N M+ + + + +
Sbjct: 92 HIFDEITDKNVVFFNV-------------------------------MIRSYVNNGLYQD 120
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F M ++ F Y++ L AC+ S + +G Q+H + K ++Y+G+ L+
Sbjct: 121 ALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVS 180
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKC + ARRV D M R++VSWNS++ Y QNG +DAL++ M ++PD T
Sbjct: 181 MYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGT 240
Query: 255 LASVVSACAS------------LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK-- 300
+ S++ A + KE I +M + N + N VD+Y +
Sbjct: 241 MGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNN--AMPNEAVDLYLQMQ 298
Query: 301 -----------------CGKLNEARC------VFDRMPIR-NVVSETSMVSGYAKASSVK 336
CG L+ A +R +R N++ E +++ YAK +K
Sbjct: 299 VHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLK 358
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
AR +F +M+ R+VVSW ++I+ Y +G+ ++A+ LF+ ++ P F ++L AC+
Sbjct: 359 EARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACS 418
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VER 455
+ + GR + ++G+ I N ++D+ + G +++ + M +E
Sbjct: 419 HAGLVDEGRYCFNLMAEYGI------TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEP 472
Query: 456 DWVSWNAMIVGC 467
+ W +++ C
Sbjct: 473 NERVWGSLLSAC 484
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/663 (34%), Positives = 347/663 (52%), Gaps = 82/663 (12%)
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +++ N I+ +K+GF+ A+ LF MP+RD SWN+M+SG+ + +A F
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M + YSF L A F +G QVH L+ K Y +VY+GS+L+DMY KC
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-MASGIEPDEVTLASVV 259
RV A F + E N VSWN+LI + Q A + M M + + D T A ++
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM-PIRN 318
+ Q+HA++++ L++++ + NA++ YA CG +++A+ VFD + ++
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKL-GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKM--------------------------------- 345
++S SM++G++K +SA +F +M
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 346 ------LERNVVSWNALIAGYTQ--NGENEEALGLFRLLKRESVCPTH------------ 385
LE+ + NALI+ Y Q G E+AL LF LK + + +
Sbjct: 330 MVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLS 389
Query: 386 -------------------YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
Y F LL +C++LA LQLG+Q H K G F+S E
Sbjct: 390 EDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG--FVSNE---- 443
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
FV +SLI MY KCG +E + F+ + + V+WNAMI+G AQ+G G +L LF +M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
K DHVT +L ACSH GL++EG + + M + + P +HY VDLLGRAG ++
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVN 563
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+AK LIE+MP+ PD ++ + L C+ I + VA LLEIEP + YV LS+MY+
Sbjct: 564 KAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 623
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+L +W E V+K+M++RGV K PG SWIEI V F +D+ +PL ++IY+++K LT+
Sbjct: 624 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQ 683
Query: 666 EMK 668
EM+
Sbjct: 684 EMQ 686
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
G SDI+V N ++D Y+K G + +F+ M +RD VSWN MI G G +A LF
Sbjct: 30 GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLF 89
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC------- 533
M G D + +L + K F + HGL +K Y C
Sbjct: 90 TCMKRSGSDVDGYSFSRLLKGIASV-------KRFDLGEQVHGLV-IKGGYECNVYVGSS 141
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI-----MLGEYVAKKLLE 588
+VD+ + +++A + + +P++V W +L+A R+I +LG K +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 589 IEPSNSGPYVLL 600
++ P + L
Sbjct: 201 MDAGTFAPLLTL 212
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 323/586 (55%), Gaps = 42/586 (7%)
Query: 113 ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+R C S +S A S+A+ + + L S L C + K G
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 173 VHALLSKSRYS-SDVYMGSALIDMYGKCGRV--SC------------------------- 204
+H L + + + + + LI MY KCG+ +C
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 205 ----ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
AR VFD M ER++VSWN+++ Y Q+G +AL + SGI+ +E + A +++
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC + Q H +++ L N +VL +++D YAKCG++ A+ FD M ++++
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSN-VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH 246
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
T+++SGYAK +++A +F +M E+N VSW ALIAGY + G AL LFR +
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
V P +TF + L A A++A L+ G++ H ++++ +R + V +SLIDMY K G
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVR------PNAIVISSLIDMYSKSG 360
Query: 441 SVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
S+E R+F ++ D V WN MI AQ+G G +AL + M+ +P+ T++ +L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLVEEG ++F SM+ +HG+ P ++HY C++DLLGRAGC E IE MP +PD
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
IW ++L C++H N LG+ A +L++++P +S PY+LLS++YA+ G+W V ++R +
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGV 540
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKD--KRHPLNKEIYLVLKML 663
M+KR V K+ SWIEI V F V D H +EIY +L L
Sbjct: 541 MKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 248/518 (47%), Gaps = 80/518 (15%)
Query: 2 ATQRSVKQIVGDLAFLDSS----PF---AKLLDSCLRSKSVSDTRRVHARIIKSQFA-SE 53
AT+ + Q V L L PF A LL C +KS+ + +H + + F
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 54 IFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPE 113
+ N LI +Y KCG A KVFD+M +N+++WN++++G +K G + A +F SMPE
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 114 RDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQV 173
RD SWN+MV G+AQ EAL ++ + +E+SF L+AC S ++ Q
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA 201
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR-------------------- 213
H + + + S+V + ++ID Y KCG++ A+R FD M
Sbjct: 202 HGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM 261
Query: 214 -----------ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
E+N VSW +LI Y + G + AL++F +M+A G++P++ T +S + A
Sbjct: 262 EAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
AS+A+ + G +IH ++R N +V+ ++L+DMY+K G L + VF
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVI-SSLIDMYSKSGSLEASERVF----------- 369
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
R+ K + V WN +I+ Q+G +AL + + + V
Sbjct: 370 ----------------RICDDK---HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 383 PTHYTFGNLLNACANLADLQLG-RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P T +LNAC++ ++ G R + V+HG+ + +E LID+ + G
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGI--VPDQEH----YACLIDLLGRAGC 464
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALG 478
++ R E M E D WNA++ C +G E LG
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVC--RIHGNEELG 500
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 221/474 (46%), Gaps = 58/474 (12%)
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
R+R I S ++ + S A+ + GI LAS++ C + K+G
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
IH L R + +L N L+ MY KCGK +A VFD+M +RN+ S +MVSGY K+
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
+ AR++F M ER+VVSWN ++ GY Q+G EAL ++ +R + ++F LL
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
AC LQL RQAH V+ ++G S++ + S+ID Y KCG +E R F+ M
Sbjct: 187 TACVKSRQLQLNRQAHGQVL------VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 453 VERD---W----------------------------VSWNAMIVGCAQNGYGTEALGLFK 481
+D W VSW A+I G + G G AL LF+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KM+ G KP+ T LCA + + G++ M + + + P + ++D+ ++
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKS 359
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL-----LEIEPSNSGP 596
G L+ ++ + + D V W ++++A H LG + L ++P+ +
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTL 416
Query: 597 YVLL-----SNMYAELGRWGEVVRVRKLMRKRGVV--KQPGCSWIEILGHVNVF 643
V+L S + E RW E + V + G+V ++ I++LG F
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTV-----QHGIVPDQEHYACLIDLLGRAGCF 465
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 286/479 (59%), Gaps = 7/479 (1%)
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G ++ A VFD + + +N++ Y + A + + ++ RM+ + P++ T
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ AC A +EG QIHA +++ + L N L+ MY L +AR VFD MP R
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNN-LIHMYVNFQSLEQARRVFDNMPQR 184
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VVS TS+++GY++ V AR +F M ERN VSWNA+IA Y Q+ EA LF ++
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMR 244
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E+V + ++L+AC L L+ G+ H ++ K SG E D + ++IDMY
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK------SGIELDSKLATTVIDMYC 298
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG +E +F + ++ SWN MI G A +G G A+ LFK+M PD +T +
Sbjct: 299 KCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVN 358
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL AC+H+GLVEEG+ YF M++ GL P +H+ CMVDLLGRAG L+EA+ LI MP+
Sbjct: 359 VLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVN 418
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA + G+L+ AC++H N LGE + KK++E+EP NSG YVLL+N+YA GRW +V +VR
Sbjct: 419 PDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVR 478
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
KLM RGV K PG S IE V+ F+ + HP KEIY L + ++ +GYVP+
Sbjct: 479 KLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDT 537
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 158/295 (53%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ +C ++ + +++HA ++K F ++ F N LI +Y L AR+VFD M
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V +W S+ITG +WGF+D A +F MPER+ SWN+M++ + Q +R EA F +
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M EN L ++ S LSAC G + G +H + KS D + + +IDMY KCG
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 302
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ A VF+ + ++ I SWN +I +G A+E+F M + PD +T +V+SA
Sbjct: 303 LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSA 362
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
CA +EG + L+ + +VD+ + G L EAR + + MP+
Sbjct: 363 CAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPV 417
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 204/483 (42%), Gaps = 111/483 (22%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDKMSNK 83
LDSC ++++ ++ H++II+ +++ R+I A K G L A +VFDK+
Sbjct: 27 LDSC---STMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKI--- 80
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
P D +N++ G+ + + + +M
Sbjct: 81 ----------------------------PHPDAYIYNTIFRGYLRWQLARNCIFMYSRML 112
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
++ + +++++ + AC + G Q+HA + K + +D + + LI MY +
Sbjct: 113 HKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLE 172
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFV---------------------- 241
ARRVFD M +R++VSW SLIT Y Q G A EVF
Sbjct: 173 QARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNR 232
Query: 242 ---------RMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
RM + D+ AS++SAC L A ++G IH + + + D L
Sbjct: 233 LHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK-SGIELDSKLAT 291
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++DMY KCG L +A VF+ +P + + S M+ G A
Sbjct: 292 TVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA---------------------- 329
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
+G+ E A+ LF+ ++RE V P TF N+L+ACA+ ++ G
Sbjct: 330 ---------MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEG-------- 372
Query: 413 KHGLRFLS---GEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCA 468
KH ++++ G + + ++D+ + G +E+ ++ M V D A++ C
Sbjct: 373 KHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACR 432
Query: 469 QNG 471
+G
Sbjct: 433 IHG 435
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 114/310 (36%), Gaps = 80/310 (25%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD A +L +C ++ + +H I KS + + +ID+Y KCGCL A +V
Sbjct: 250 LDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEV 309
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+++ K + +WN +I GL A H + A+
Sbjct: 310 FNELPQKGISSWNCMIGGL-------------------------------AMHGKGEAAI 338
Query: 137 GYFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMG 189
F +M E A +F + LSACA G F+ T+V L +
Sbjct: 339 ELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF------ 392
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
++D+ G+ G + AR++ + M +
Sbjct: 393 GCMVDLLGRAGLLEEARKLINEMP----------------------------------VN 418
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD L ++V AC + G QI +++ E + + L ++YA G+ +
Sbjct: 419 PDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV--LLANLYASAGRWEDVAK 476
Query: 310 VFDRMPIRNV 319
V M R V
Sbjct: 477 VRKLMNDRGV 486
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 311/538 (57%), Gaps = 38/538 (7%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGK--CGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
QVHA+ ++ + D Y+ L+ Y ++ A +VF+ + N+ +N +I Q
Sbjct: 48 QVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA------------- 276
N A+ + +MM + P++ T ++ AC + A +EG+Q+HA
Sbjct: 108 NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHI 167
Query: 277 -----------------RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
R M E +D++ NA++D Y KCG++ A+ +F M +NV
Sbjct: 168 RSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNV 227
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S MVSG AK ++ AR +F +M E+N +SW+A+I GY + G +EAL +F +++RE
Sbjct: 228 GSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQRE 287
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P + ++L ACANL L GR H +V + F D +G +L+DMY KC
Sbjct: 288 EIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSF------DAVLGTALVDMYAKC 341
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G ++ +FE M +++ +WNAMI G +G +A+ LF KM +P+ +T++GVL
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVL 401
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H+G+V+EG + F+SM + +G+ P +HY C+VDLLGRAG L EA+ ++ +MPM+P
Sbjct: 402 SACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPS 461
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
A +WG+LL AC+ H ++ LGE V K LLE+EP NSG Y LLSN+YA GRW +V VRKL
Sbjct: 462 AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKL 521
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M++RGV G S I+ G V+ F + D HP K IYL+LK + + +K G+ PN S
Sbjct: 522 MKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTS 579
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 150/273 (54%)
Query: 44 RIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD 103
R++ S++ N +ID Y KCG + A+++F M +KNV +WN +++G+ K G I++
Sbjct: 186 RMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEE 245
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A LF M E+++ SW++M+ G+ + + EAL F M E ++ S L+ACA
Sbjct: 246 ARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACAN 305
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
G +HA ++ + S D +G+AL+DMY KCGR+ A VF+ M ++ + +WN++
Sbjct: 306 LGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAM 365
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I +G A DA+E+F +M P+ +TL V+SACA EGL+I +
Sbjct: 366 ICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYG 425
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + +VD+ + G L EA V MP+
Sbjct: 426 IEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPM 458
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 208/511 (40%), Gaps = 145/511 (28%)
Query: 32 SKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAK--CGCLYGARKVFDKMSNKNVFTWN 89
S S+ ++VHA +++ + ++ L+ YA L A KVF+ + N NVF +N
Sbjct: 40 STSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFN 99
Query: 90 SIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFAL 149
II G L+ + P + C + M+ A+ ++F
Sbjct: 100 IIIKGCLQ-----------NNEPCKAICCYYKMMIAHARPNKF----------------- 131
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG------------ 197
++ + AC + + G QVHA + K S DV++ SA I MYG
Sbjct: 132 ---TYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRML 188
Query: 198 -------------------KCGRVSCARRVFDGMRERNI--------------------- 217
KCG V A+ +F M ++N+
Sbjct: 189 GEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARE 248
Query: 218 ----------VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+SW+++I Y + G +ALEVF M I P + L+SV++ACA+L A
Sbjct: 249 LFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGA 308
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
+G IHA + D VLG ALVDMYAKCG+L+ A VF++M + V
Sbjct: 309 LDQGRWIHAYVNNNSN-SFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEV-------- 359
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
+WNA+I G +G E+A+ LF ++++ P T
Sbjct: 360 -----------------------FTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT 396
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLS------GEESDIFVGNSLIDMYMKCGS 441
+L+AC AH+ +V GLR + G E + ++D+ + G
Sbjct: 397 LLGVLSAC-----------AHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGL 445
Query: 442 VEDGCRIFETM-VERDWVSWNAMIVGCAQNG 471
+ + + +M +E W A++ C ++G
Sbjct: 446 LGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/647 (33%), Positives = 345/647 (53%), Gaps = 73/647 (11%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ + LL C ++K++ +HA ++K+ S++F+ N ++++YAKCG AR+V
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV-- 60
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
F M E++ SW++M+SG+ Q A+
Sbjct: 61 -----------------------------FDEMFEKNLVSWSAMISGYDQAGEPQMAIDL 91
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M +EY F S +SACA +G ++H+ K Y S ++ ++LI MY K
Sbjct: 92 YSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMK 148
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C + S A VF E N VS+N+LIT + +N LE F M G+ PD V
Sbjct: 149 CNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ C + K G ++H + ++ L + +GN ++ MY++ + EA
Sbjct: 209 LGICTTTENLKRGAELHCQTVKL-NLDSTPFIGNVIITMYSELNLIQEAE---------- 257
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
K+ RL+ E++V+SWN LIA + ++ + L +F+ +
Sbjct: 258 -----------------KAFRLI----EEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE 296
Query: 379 ES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E+ V P +TF + L ACA LA + G+Q H H+++ L D+ VGN+L++MY
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLY------QDLGVGNALVNMYA 350
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + IF MV + VSWN +I G +G G A+ LF++M G +PD VT IG
Sbjct: 351 KCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIG 410
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+HAGLV++G+ YF+SM + +G+AP +H++C++D+LGRAG L+EA+ + P
Sbjct: 411 LLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFW 470
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
D V+ SLL+A ++H ++++GE +AK LL+++P + PYVLLSN+YA G W V R
Sbjct: 471 NDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEAR 530
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
K ++ G+ K+PG S IE+ G V F + D H KEI +LK L+
Sbjct: 531 KRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 32/302 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L C ++++ +H + +K S FI N +I +Y++ + A K F
Sbjct: 201 DRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAF 260
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K+V +WN++I CS D ++ L
Sbjct: 261 RLIEEKDVISWNTLIAA----------------------CS---------HCDDHAKGLR 289
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M E N +++F SAL+ACAG G Q+HA L ++R D+ +G+AL++MY
Sbjct: 290 VFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMY 349
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A +F M N+VSWN++I + +G A+E+F +M ASGI PD VT
Sbjct: 350 AKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFI 409
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++AC +G + + D+ + L+DM + G+LNEA + P
Sbjct: 410 GLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPF 469
Query: 317 RN 318
N
Sbjct: 470 WN 471
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 323/606 (53%), Gaps = 81/606 (13%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+ ++ F Q +R EA+ Y ++ + L + + ++AC ++G +VHA
Sbjct: 35 FEEIIELFCQQNRLKEAVDYLHRIPQPSPRL----YSTLIAACLRHRKLELGKRVHAHTK 90
Query: 179 KSRYSSDVYMGSALIDMYGKCG-------------------------------RVSCARR 207
S + + + + LI MY KCG R+ AR+
Sbjct: 91 ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD--EVTLASVVSACASL 265
+FD M R+ SWN++I+ Y G +AL++F RMM + TL+S ++A A++
Sbjct: 151 LFDEMPHRDNFSWNAVISGYVSQGWYMEALDLF-RMMQENESSNCNMFTLSSALAAAAAI 209
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
++ + G +IH L+R L D V+ AL+D+Y KCG LNE
Sbjct: 210 SSLRRGKEIHGYLIR-SGLELDEVVWTALLDLYGKCGSLNE------------------- 249
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
AR +F +M ++++VSW +I ++G +E LFR L V P
Sbjct: 250 ------------ARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNE 297
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
YTF +LNACA+LA Q+G++ H ++ + G S F ++L+ +Y KCG+ E
Sbjct: 298 YTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS------FAASALVHVYSKCGNTETA 351
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
R+F M D VSW ++IVG AQNG AL F+ +L G KPD +T +GVL AC+HA
Sbjct: 352 RRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHA 411
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLV+ G +YF S+ ++HGL DHY C++DLL R+G EA+ +I+ MPM+PD +W S
Sbjct: 412 GLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWAS 471
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL C++H NI L E AK L E+EP N Y+ LSN+YA G W E +VR M RG+
Sbjct: 472 LLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGI 531
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-----DDE 680
VK+PG SWIEI V+VF+V D HP +I+ L L+++MK GYV + + +E
Sbjct: 532 VKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEE 591
Query: 681 AYEEQN 686
+EQN
Sbjct: 592 EQKEQN 597
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 258/501 (51%), Gaps = 44/501 (8%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ L+ +CLR + + +RVHA S F I I NRLI +YAKCG L A+ +FD++
Sbjct: 66 YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K++ +WN++I+G G I+ A +LF MP RD SWN+++SG+ + EAL F
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRM 185
Query: 142 MH-SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M +E+ + ++ SAL+A A + G ++H L +S D + +AL+D+YGKCG
Sbjct: 186 MQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCG 245
Query: 201 RVSCARRVFDGMRERNIVSWNSLI-TCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
++ AR +FD M +++IVSW ++I C+E +G + +F +M SG+ P+E T A V+
Sbjct: 246 SLNEARGIFDQMADKDIVSWTTMIHRCFE-DGRKKEGFSLFRDLMGSGVRPNEYTFAGVL 304
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
+ACA LAA + G ++H + R +ALV +Y+KCG AR VF++MP ++
Sbjct: 305 NACADLAAEQMGKEVHGYMTRVGYDPFSFA-ASALVHVYSKCGNTETARRVFNQMPRPDL 363
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS TS++ GYA QNG+ + AL F L R
Sbjct: 364 VSWTSLIVGYA-------------------------------QNGQPDMALQFFESLLRS 392
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQA-HTHVVKHGLRFLSGEESDIFVGNSLIDMYMK 438
P TF +L+AC + + +G + H+ KHGL + + +ID+ +
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYA------CVIDLLAR 446
Query: 439 CGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
G ++ I + M ++ D W +++ GC +G E K L E + T I
Sbjct: 447 SGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG-NIELAERAAKALFELEPENPATYIT 505
Query: 498 VLCACSHAGLVEEGRKYFSSM 518
+ ++AGL E K + M
Sbjct: 506 LSNIYANAGLWTEETKVRNDM 526
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/615 (35%), Positives = 335/615 (54%), Gaps = 46/615 (7%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM--HSENFALSEYSFGS 156
G ++DA +F SMP R++ SW ++S + + EAL + + S + F S
Sbjct: 6 GRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSS 65
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L+ACA + G ++H + K DV + +AL+ MY KCGR+ A++VFD + R+
Sbjct: 66 VLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRD 125
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMAS------------------------------ 246
+VSWN++++ + G AL+++ M+++
Sbjct: 126 VVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL 185
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
+ P+ TLA+V++AC L G + ++ L D V+G LV++YA+ G +
Sbjct: 186 SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQ-SGLDRDAVVGTTLVNLYARFGDVIA 244
Query: 307 ARCV-FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
AR V FD M R VVS +MV+ +A+ + V A +F +M +++V+SWNA+IAG+ QNG
Sbjct: 245 AREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGR 304
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
++AL LFR + E + P+ T+ ++L+ACANL LGR + G+ D
Sbjct: 305 PKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGR-----FICDGMD--EALAKD 357
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
I V NS+ +MY KCG E + F M RD VSW A+I +QNGY +EAL +F+ M+
Sbjct: 358 ISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQ 417
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM--SKEHGLAPLKDHYTCMVDLLGRAGC 543
G +P+ +T+I L ACSH L +EG FSS+ +G+ + H+ C +DLLGRAG
Sbjct: 418 AGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGY 477
Query: 544 LDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS---NSGPYVLL 600
L +A+TLI MP + AV W SLL+AC+ R++ VA L E++ S + PYV+L
Sbjct: 478 LKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVML 537
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SN+YA G +++R +R + K PG S I I G N F D+ HP + Y L
Sbjct: 538 SNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNEFYSLDETHPRRDDAYNEL 597
Query: 661 KMLTREMKRVGYVPN 675
+ L ++MK GYVP+
Sbjct: 598 RRLFQKMKEAGYVPD 612
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 207/409 (50%), Gaps = 45/409 (11%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG--IEPDE 252
MY CGR+ AR VFD M RN SW +I+ Y G +AL ++ ++ S I+ D
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+SV++ACA L ++GL+IH R+++ ++ D+ L NALV MYAKCG+++ A+ VFD
Sbjct: 61 FIFSSVLAACARLKCLEQGLEIHERIVK-RGVKQDVGLQNALVTMYAKCGRIDRAKQVFD 119
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R+ R+VVS +MVS A+A ++ A ++ +M+ +V+ W+ +I+ G + EAL L
Sbjct: 120 RITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALEL 179
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+R + SV P T +L AC L DL G ++ GL + D VG +L
Sbjct: 180 YREMIL-SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGL------DRDAVVGTTL 232
Query: 433 IDMYMKCGS--------------------------------VEDGCRIFETMVERDWVSW 460
+++Y + G V++ ++F M ++ +SW
Sbjct: 233 VNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISW 292
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
NAMI G QNG +AL LF++M L G +P +T VL AC++ GR M
Sbjct: 293 NAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGM-- 350
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ LA + ++ G+ G + A+ M + D V W +++AA
Sbjct: 351 DEALAKDISVANSICNMYGKCGLPELARQTFLEMTYR-DVVSWTAIIAA 398
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 235/498 (47%), Gaps = 79/498 (15%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
RS +I D AF+ F+ +L +C R K + +H RI+K ++ +QN L+ +Y
Sbjct: 51 RSSTEIQAD-AFI----FSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMY 105
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AKCG + A++VFD++++++V +WN++++ + G ++ A +++ M D W++M+S
Sbjct: 106 AKCGRIDRAKQVFDRITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMIS 165
Query: 125 --GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY 182
A HDR EAL + +M + + + + L+AC D G V +S
Sbjct: 166 AEAMAGHDR--EALELYREM-ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGL 222
Query: 183 SSDVYMGSALIDMYGKCGRVSCARRV-FDGMRERNIVSWNSLITCYE------------- 228
D +G+ L+++Y + G V AR V FD M++R +VSWN+++T +
Sbjct: 223 DRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFR 282
Query: 229 ------------------QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKE 270
QNG ALE+F RM G++P +T SV+ ACA+L A
Sbjct: 283 EMPDKSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSL 342
Query: 271 GLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
G I + E L D+ + N++ +MY KCG AR F M R+VVS
Sbjct: 343 GRFICDGMD--EALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVS--------- 391
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
W A+IA Y+QNG + EAL +FR++ + V P T N
Sbjct: 392 ----------------------WTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLIN 429
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L+AC++ A G + +V ++ ES ID+ + G ++D +
Sbjct: 430 TLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCA---IDLLGRAGYLKDAETLIT 486
Query: 451 TM-VERDWVSWNAMIVGC 467
M + V+W +++ C
Sbjct: 487 KMPFKAGAVAWTSLLSAC 504
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 182/334 (54%), Gaps = 5/334 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV- 76
++S A +L +C R +S V I+S + + L+++YA+ G + AR+V
Sbjct: 190 NASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVL 249
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD M ++ V +WN+++T + +D+A +LF MP++ SWN+M++GF Q+ R +AL
Sbjct: 250 FDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQAL 309
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E S ++ S L ACA +G + + ++ + D+ + +++ +MY
Sbjct: 310 ELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEA-LAKDISVANSICNMY 368
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG AR+ F M R++VSW ++I Y QNG +S+AL++F M+ +G+EP+ +TL
Sbjct: 369 GKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEPNGITLI 428
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL--VDMYAKCGKLNEARCVFDRM 314
+ +SAC+ A F EG I + L+ + + L +D+ + G L +A + +M
Sbjct: 429 NTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKM 488
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKMLE 347
P + V+ TS++S +K A + + E
Sbjct: 489 PFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFE 522
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 155/359 (43%), Gaps = 78/359 (21%)
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNAL 356
MY CG+L +AR VFD MP+R N SW +
Sbjct: 1 MYRDCGRLEDARAVFDSMPLR-------------------------------NEFSWAII 29
Query: 357 IAGYTQNGENEEALGLFRLLKRES--VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
I+ Y G+ +EAL L+R L R S + + F ++L ACA L L+ G + H +VK
Sbjct: 30 ISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSSVLAACARLKCLEQGLEIHERIVKR 89
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ----- 469
G++ D+ + N+L+ MY KCG ++ ++F+ + RD VSWNAM+ A+
Sbjct: 90 GVK------QDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANAEAGHLE 143
Query: 470 --------------------------NGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
G+ EAL L+++M+L +P+ T+ VL AC+
Sbjct: 144 VALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL-SVRPNASTLATVLAACT 202
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
G + G + + GL T +V+L R G + A+ ++ V W
Sbjct: 203 RLGDLSSG-ALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSW 261
Query: 564 GSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRK 622
+++ A +N + E A+KL P S + + M A G+ G + +L R+
Sbjct: 262 NAMVTA--FAQNARVDE--AEKLFREMPDKS--VISWNAMIAGFGQNGRPKQALELFRR 314
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 317/573 (55%), Gaps = 41/573 (7%)
Query: 139 FVKMHSENFALSEYSFGSALSACA-GSVDFKMGTQVHALLSKSRYSSDVYMGS-ALIDMY 196
+ +M ++F CA G + +HA ++ S V + S +I MY
Sbjct: 91 YRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMY 150
Query: 197 GKCGRVSCARRVFDGMR-------------------------------ERNIVSWNSLIT 225
+ G ARR FD + RN++SW LI+
Sbjct: 151 VELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLIS 210
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y + G A++A++ F M++ GIEPDEVT+ ++SACA L G +H +L+ + +
Sbjct: 211 GYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLH-KLVGEKGML 269
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPI-RNVVSETSMVSGYAKASSVKSARLMFTK 344
L AL+DMYAKCG + A VFD + R S +M+ GY K V AR +F +
Sbjct: 270 MSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQ 329
Query: 345 MLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLG 404
M +R++V++N+LI GY G EAL LF ++R + ++T +LL ACA+L L G
Sbjct: 330 MEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQG 389
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
R H + + + E DI++G +L+DMY+KCG VE+ +F+ M RD +W+AMI
Sbjct: 390 RALHACIEQRLV------EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMI 443
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A NG G AL F M + G +P+ VT I +L ACSH+ L++EGR YF M H +
Sbjct: 444 AGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNI 503
Query: 525 APLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAK 584
PL +HY CM+DLLGR+G LDEA L+ MPMQP+AVIW S+L+AC+VH++ L A+
Sbjct: 504 RPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAE 563
Query: 585 KLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM 644
LL++EP YV L N+Y + +W + ++R+LM +RGV K G S I + G V+ F+
Sbjct: 564 HLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFI 623
Query: 645 VKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V D+ HP EI +++ +TR +K VGY P S
Sbjct: 624 VCDRTHPQIMEITAMMEEITRRLKSVGYSPITS 656
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 222/485 (45%), Gaps = 72/485 (14%)
Query: 18 DSSPFAKLLDSCLRSKS-VSDTRRVHARIIKSQFASEI-FIQNRLIDVYAKCGCLYGARK 75
D+ F L C R ++ V + +HA ++ S + + N +I +Y + G AR+
Sbjct: 102 DAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARR 161
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
FD + K+ W ++I+GL K G +DDA L P R+ SW ++SG+++ R +EA
Sbjct: 162 AFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEA 221
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M S+ E + LSACA D G +H L+ + + ALIDM
Sbjct: 222 VDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDM 281
Query: 196 YGKC--------------------------------GRVSCARRVFDGMRERNIVSWNSL 223
Y KC G V AR +FD M +R++V++NSL
Sbjct: 282 YAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSL 341
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
IT Y G +AL +F++M + D T+ S+++ACASL A +G +HA + +
Sbjct: 342 ITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQ-RL 400
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ D+ LG AL+DMY KCG++ EA VF M +R+
Sbjct: 401 VEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRD------------------------- 435
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
V +W+A+IAG NG + AL F +K + P T+ +L AC++ L
Sbjct: 436 ------VHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDE 489
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
GR + +R L I +ID+ + G +++ + TM ++ + V W +
Sbjct: 490 GR-----LYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWAS 544
Query: 463 MIVGC 467
++ C
Sbjct: 545 ILSAC 549
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 179/362 (49%), Gaps = 5/362 (1%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN-K 83
LL +C + K + R +H + + + LID+YAKCG + A +VFD + +
Sbjct: 243 LLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGR 302
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
+WN++I G K G +D A LF M +RD ++NS+++G+ R EAL F++M
Sbjct: 303 RPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMR 362
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ ++ S L+ACA G +HA + + D+Y+G+AL+DMY KCGRV
Sbjct: 363 RHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVE 422
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A VF M R++ +W+++I NG ALE F M G +P+ VT ++++AC+
Sbjct: 423 EASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACS 482
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSE 322
EG + +R + ++D+ + G L+EA + MP++ N V
Sbjct: 483 HSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIW 542
Query: 323 TSMVSG---YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
S++S + A+ ++A K+ + L Y + + E+A + RL++
Sbjct: 543 ASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEER 602
Query: 380 SV 381
V
Sbjct: 603 GV 604
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 187/395 (47%), Gaps = 43/395 (10%)
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+FD M + +L C+ + L ++ RM +G+ D T + CA A
Sbjct: 59 LFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRA 118
Query: 268 FKEGLQ-IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMV 326
Q +HA R ++ N ++ MY + G +AR FD +P+++ V+ T+++
Sbjct: 119 HVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVI 178
Query: 327 SGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHY 386
SG AK + A + RNV+SW LI+GY++ G EA+ F + + + P
Sbjct: 179 SGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEV 238
Query: 387 TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE--- 443
T LL+ACA L DL GR H V + G+ +SG+ + +LIDMY KCG +
Sbjct: 239 TVIGLLSACAQLKDLVFGRSLHKLVGEKGM-LMSGK-----LVVALIDMYAKCGDIGRAW 292
Query: 444 -------------------DG-CR---------IFETMVERDWVSWNAMIVGCAQNGYGT 474
DG C+ +F+ M +RD V++N++I G G
Sbjct: 293 EVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLR 352
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-TC 533
EAL LF +M + D+ TM+ +L AC+ G + +GR + + E L + + T
Sbjct: 353 EALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACI--EQRLVEVDIYLGTA 410
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++D+ + G ++EA + +AM ++ D W +++A
Sbjct: 411 LLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIA 444
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 129/327 (39%), Gaps = 78/327 (23%)
Query: 267 AFKEGLQIHARLMRCEKLRNDLV---LGNALVDMYAKCGKLN--EARCVFDRMPIRNVVS 321
+ ++ ++HA L+ +L + L N+LV+ + L+ A C+FDRMP +
Sbjct: 11 SVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLF 70
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
+T AL A + + E L L+R ++R V
Sbjct: 71 DT-------------------------------ALRACFRASSGPESPLILYRRMRRTGV 99
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVK--HGLRFLSGEESDI-FVGNSLIDMYMK 438
C +TF L CA GR AH + + H F + S + V N +I MY++
Sbjct: 100 CTDAFTFHFLFKCCAR------GR-AHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVE 152
Query: 439 CGSVEDGCRIFETMVERD---W----------------------------VSWNAMIVGC 467
G D R F+ + +D W +SW +I G
Sbjct: 153 LGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGY 212
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
++ G EA+ F ML G +PD VT+IG+L AC+ + GR + E G+
Sbjct: 213 SRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRS-LHKLVGEKGMLMS 271
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAM 554
++D+ + G + A + +A+
Sbjct: 272 GKLVVALIDMYAKCGDIGRAWEVFDAL 298
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 338/661 (51%), Gaps = 90/661 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F +L V ++VH+ I+K + +F + L+D+YAKC
Sbjct: 98 VDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCE-------- 149
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
++DA +F S+ R+ +WN+++SG+A A
Sbjct: 150 -----------------------RVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAF 186
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
M E + + +F L+ K+ TQVHA + K +SD + +A+I Y
Sbjct: 187 WLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246
Query: 197 GKCGRVSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
+CG + A RVFDG E R++V+WNS++ Y N +A E+F+ M G EPD T
Sbjct: 247 SECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTY 306
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
SV+SA A +G +H +++ L + + N+L+ MY K
Sbjct: 307 TSVISAAFEXAHQGQGKSLHGLVIK-RGLEFLVPISNSLIAMYLK--------------- 350
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+ + S+ A +F + ++ VSWN+++ G++Q+G +E+AL F
Sbjct: 351 --------------SHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFEN 396
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
++ + V HY F +L +C++LA LQLG+Q H
Sbjct: 397 MRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH--------------------------- 429
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
+ CG +ED + F+ + ++WN++I G AQ+G G AL LF M K DH+T
Sbjct: 430 -VLCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 488
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+ VL ACSH GLVEEG + SM ++G+ P +HY CM+DLLGRAG LDEAK LIEAMP
Sbjct: 489 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 548
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+PDA++W +LL AC+ +I L VA LLE+EP YVLLS+M+ L RW E
Sbjct: 549 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 608
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+++LM++RGV K PG SWIE+ V+ F +D+ HP +EIYL L L E++R+ YV N
Sbjct: 609 IKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHPNCEEIYLRLGDLMEEIRRLDYVAN 668
Query: 676 A 676
+
Sbjct: 669 S 669
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 180/399 (45%), Gaps = 43/399 (10%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H L KS ++ +Y + +I Y KCG + A ++FD +R+ VSWN++I G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
ALE M G D + S++ A + + G Q+H+ +++ ++ G+A
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKI-GYEGNVFAGSA 140
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+DMYAKC ++ +A VF + IRN V+ +++SGYA
Sbjct: 141 LLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHV--------------------- 179
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
G+ A L ++ E V TF LL + +L Q H +VK
Sbjct: 180 ----------GDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK 229
Query: 414 HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVE-RDWVSWNAMIVGCAQNGY 472
HGL SD V N++I Y +CGS+ED R+F+ +E RD V+WN+M+ N
Sbjct: 230 HGL------ASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQ 283
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKE--HGLAPLKDH 530
EA LF +M + G +PD T V+ A +G+ + K L P+ +
Sbjct: 284 EEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNS 343
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
M L + +DEA + E++ D V W S+L
Sbjct: 344 LIAMY-LKSHSKSMDEALNIFESLE-NKDHVSWNSILTG 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%)
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
V H L SG + I+ N++I Y KCG + ++F+ +RD VSWN MI G G
Sbjct: 20 VNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFG 79
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
AL K M G D + +L + G VE G++ S + K
Sbjct: 80 NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVK 128
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/658 (34%), Positives = 350/658 (53%), Gaps = 74/658 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F++LL C+ +S+S + + A ++KS F +EI ++L+D KCG
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCG------------- 113
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
ID A ++F M ER +WNS+++ +H R EA+ +
Sbjct: 114 ------------------DIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRL 155
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCG 200
M + N EY+ S A + K + H L + S+V++GSAL+DMY K G
Sbjct: 156 MITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFG 215
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+ V D + E+++V +LI Y Q G ++A++ F M+ ++P+E T ASV+
Sbjct: 216 KTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLI 275
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
+C +L G IH + K G F+ +
Sbjct: 276 SCGNLKDIGNGKLIHG--------------------LMVKSG--------FESA----LA 303
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S+TS+++ Y + S V + +F + N VSW +LI+G QNG E AL FR + R+S
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T + L C+NLA + GRQ H V K+G + D + G+ LID+Y KCG
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF------DRDKYAGSGLIDLYGKCG 417
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+ +F+T+ E D +S N MI AQNG+G EAL LF++M+ G +P+ VT++ VL
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC+++ LVEEG + F S K+ + DHY CMVDLLGRAG L+EA+ L + + PD
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDK-IMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDL 535
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
V+W +LL+ACKVHR + + E + +K+LEIEP + G +L+SN+YA G+W V+ ++ M
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDK-RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ + K P SW+EI + FM D HP +++I L+ L ++ K +GYV + S
Sbjct: 596 KDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKS 653
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 212/405 (52%), Gaps = 39/405 (9%)
Query: 150 SEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVF 209
+ ++F L C + A + KS + +++ GS L+D KCG + AR+VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVF 122
Query: 210 DGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFK 269
DGM ER+IV+WNSLI ++ + +A+E++ M+ + + PDE TL+SV A + L+ K
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 270 EGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGY 329
E + H + +++ +G+ALVDMY K GK EA+ V DR+ ++VV T+++
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALI--- 239
Query: 330 AKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFG 389
GY+Q GE+ EA+ F+ + E V P YT+
Sbjct: 240 ----------------------------VGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYA 271
Query: 390 NLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF 449
++L +C NL D+ G+ + HGL SG ES + SL+ MY++C V+D R+F
Sbjct: 272 SVLISCGNLKDIGNGK------LIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVF 325
Query: 450 ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVE 509
+ + + VSW ++I G QNG AL F+KM+ KP+ T+ L CS+ + E
Sbjct: 326 KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
Query: 510 EGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
EGR+ ++K +G K + ++DL G+ GC D A+ + + +
Sbjct: 386 EGRQIHGIVTK-YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 42/265 (15%)
Query: 21 PFAKLLDSCLRSKS----VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
P + L S LR S + R++H + K F + + + LID+Y KCGC AR V
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD +S +V + N +M+ +AQ+ EAL
Sbjct: 426 FDTLSEVDVISLN-------------------------------TMIYSYAQNGFGREAL 454
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSR--YSSDVYMGSALID 194
F +M + ++ + S L AC S + G ++ K + ++D Y + ++D
Sbjct: 455 DLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY--ACMVD 512
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP-DEV 253
+ G+ GR+ A + + ++V W +L++ + + A + +++ IEP DE
Sbjct: 513 LLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEPGDEG 570
Query: 254 TLASVVSACASLAAFKEGLQIHARL 278
TL + + AS + +++ +++
Sbjct: 571 TLILMSNLYASTGKWNRVIEMKSKM 595
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 329/599 (54%), Gaps = 76/599 (12%)
Query: 58 NRLIDVYAKCGCLY--GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
N +I Y C + R +FD+M ++ +WN++I+G + G +D+A +LF SM ER+
Sbjct: 133 NLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDSMQERN 192
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA-CAGSVDFKMGTQVH 174
SWN+MV+GF Q+ A+ +F++M + A +LSA AG + +
Sbjct: 193 VVSWNAMVTGFLQNGDVERAIEFFMRMPERDSA--------SLSALVAGLIQNGELDEAK 244
Query: 175 ALLSKSRYSSD-----VYMGSALIDMYGKCGRVSCARRVFD------------GMRERNI 217
+L SR D V+ + L+ YG+ GRV AR++FD G ERN+
Sbjct: 245 RILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNV 304
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
VSWNS+I CY + A ++F AR
Sbjct: 305 VSWNSMIMCYVK------ARDIF----------------------------------SAR 324
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
++ + D + N ++ Y + + EA +F MP + ++ SM+SG+A+ +++
Sbjct: 325 VLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMISGFAQKGNLEL 384
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACAN 397
AR +F + ++N+VSWN++IAGY NG+ + A L+R + + P +T ++L+ C+
Sbjct: 385 ARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSG 444
Query: 398 LADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERD 456
A L LG Q H + K + DI + NSLI MY +CG++ + IF E ++++
Sbjct: 445 FAALHLGMQIHQQITKTVI-------PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKE 497
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
+SWNAMI G A +G+ +AL LF+ M +P ++T I VL AC+HAG V+EGR +F
Sbjct: 498 VISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFK 557
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNI 576
SM+ E G+ P +H+ +VD++GR G L+EA LI +MP +PD +WG+LL AC+VH N+
Sbjct: 558 SMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNV 617
Query: 577 MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
L A+ L+++EP +S PYVLL NMYA++G+W +R +M + + KQPG SW++
Sbjct: 618 ELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSWVD 676
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 151/301 (50%), Gaps = 35/301 (11%)
Query: 49 QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLF 108
+F + N +I Y K ++ AR +FD+M ++ +WN++I+G ++ +++A LF
Sbjct: 299 RFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLF 358
Query: 109 ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA-------------------- 148
MP D +WNSM+SGFAQ A F + +N
Sbjct: 359 QEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATE 418
Query: 149 -----------LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
++ S LS C+G +G Q+H ++K+ D+ + ++LI MY
Sbjct: 419 LYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT-VIPDIPINNSLITMYS 477
Query: 198 KCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG + AR +FD ++ ++ ++SWN++I Y +G A+DALE+F M + P +T
Sbjct: 478 RCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFI 537
Query: 257 SVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
SV++ACA KEG ++H + M CE + + +LVD+ + G+L EA + + MP
Sbjct: 538 SVLNACAHAGFVKEG-RMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMP 596
Query: 316 I 316
Sbjct: 597 F 597
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 198/461 (42%), Gaps = 75/461 (16%)
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K+ S D+Y + I + GR++ AR +FD M +RNIV+WNS+IT Y + + A +
Sbjct: 60 KNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARK 119
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F M + + ++ VS +EG R + E D V N ++ Y
Sbjct: 120 LFDEMPDRDVVSWNLMISGYVSCQGRWV--EEG-----RHLFDEMPERDCVSWNTMISGY 172
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+ G+++EA +FD M RNVVS +MV+G+ + V+ A F +M ER+ S +AL+A
Sbjct: 173 TRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVA 232
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTH--YTFGNLLNACANLADLQLGRQAHTHVV---- 412
G QNGE +EA + +R+ + + LL + RQ +
Sbjct: 233 GLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDG 292
Query: 413 --KHGLRFLSG---------------------------EESDIFVGNSLIDMYMKCGSVE 443
K G RF +E D N++I Y++ +E
Sbjct: 293 GQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDME 352
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQ-------------------------------NGY 472
+ +F+ M D ++WN+MI G AQ NG
Sbjct: 353 EAWMLFQEMPNPDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGD 412
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
A L+++MLL GEKPD T+ VL CS + G + ++K + P
Sbjct: 413 YKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIPINN 470
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + R G + EA+T+ + + +Q + + W +++ H
Sbjct: 471 SLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFH 511
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/629 (33%), Positives = 343/629 (54%), Gaps = 71/629 (11%)
Query: 49 QFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLF 108
+ S++F+ + L+++Y+KCG + A KVF++
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP------------------------- 168
Query: 109 ASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEYSFGSALSACAGSVDF 167
D W SMV+G+ Q++ EAL F +M + L + S +SACA ++
Sbjct: 169 ------DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNV 222
Query: 168 KMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCY 227
K G+ VH L+ + + D+ + ++L+++Y K G A +F M E++++SW+++I CY
Sbjct: 223 KAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACY 282
Query: 228 EQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
N A++AL +F M+ EP+ VT+ S + ACA +EG +IH ++ + D
Sbjct: 283 ANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH-KIAVWKGFELD 341
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE 347
+ AL+DMY KC +EA +F R+P ++VVS +++SGYA
Sbjct: 342 FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYA----------------- 384
Query: 348 RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
QNG +++G+FR + + + P +L A + L Q
Sbjct: 385 --------------QNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL 430
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H +VV+ SG S++FVG SLI++Y KCGS+ D ++F+ M+ RD V W++MI
Sbjct: 431 HGYVVR------SGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAY 484
Query: 468 AQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
+G G EAL +F +M+ +P++VT + +L ACSHAGLVEEG K F M ++ L P
Sbjct: 485 GIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRP 544
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+H+ MVDLLGR G L +A +I MP+ +WG+LL AC++H NI +GE AK L
Sbjct: 545 DSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNL 604
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVK 646
++PS++G Y+LLSN+YA G+W V +R +++RG+ K G S +E+ G V+ F+
Sbjct: 605 FWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLAS 664
Query: 647 DKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
D+ HP +++IY +L+ L +M + Y+P+
Sbjct: 665 DRFHPDSQKIYELLRKLEAQMGKEVYIPD 693
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 280/494 (56%), Gaps = 40/494 (8%)
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+Y S + A+ MY R+ A VF+ + WN +I + +G +LE++
Sbjct: 749 QYDSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806
Query: 241 VRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAK 300
+MM G++PD+ + +CA L+ + G IH L+ C NDL + ALVDMYAK
Sbjct: 807 SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCC-GCSNDLFVDAALVDMYAK 865
Query: 301 CGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
CG +++ARL+F KM R++VSW ++I+GY
Sbjct: 866 CG-------------------------------DIEAARLVFDKMAVRDLVSWTSMISGY 894
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
NG N E LG F L++ V P + ++L AC NL L+ G H++V++ G F
Sbjct: 895 AHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEF-- 952
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
DI V +++DMY KCGS++ +F+ +D V W+AMI +G+G +A+ LF
Sbjct: 953 ----DILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLF 1008
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGR 540
+M+ G +P HVT VL ACSH+GL+EEG+ YF M++E +A +Y CMVDLLGR
Sbjct: 1009 DQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGR 1068
Query: 541 AGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLL 600
AG L EA LIE MP++PDA IWGSLL AC++H N+ L E +A L ++P ++G +VLL
Sbjct: 1069 AGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLL 1128
Query: 601 SNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVL 660
SN+YA RW EV +VRK+M +RG K G S +E V+ F V D+ HP +++Y L
Sbjct: 1129 SNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKL 1188
Query: 661 KMLTREMKRVGYVP 674
+ L MK +GYVP
Sbjct: 1189 EELAAPMKHLGYVP 1202
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 186/374 (49%), Gaps = 50/374 (13%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
ID AS +F +P WN M+ GFA RF +L + KM + +++F AL +
Sbjct: 768 IDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKS 827
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
CAG D + G +H L S+D+++ +AL+DMY KCG + AR VFD M R++VSW
Sbjct: 828 CAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR 280
S+I+ Y NG S+ L F M +SG+ P+ V++ SV+ AC +L A ++G H+ +++
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQ 947
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
D+++ A++DMY+KCG L+ ARC+FD +++V ++M
Sbjct: 948 -TGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAM--------------- 991
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
IA Y +G +A+ LF + + V P+H TF +L+AC
Sbjct: 992 ----------------IASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC----- 1030
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-V 453
+H+ +++ G + + + L +D+ + G + + + E M V
Sbjct: 1031 ------SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 1084
Query: 454 ERDWVSWNAMIVGC 467
E D W +++ C
Sbjct: 1085 EPDASIWGSLLGAC 1098
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 198/401 (49%), Gaps = 41/401 (10%)
Query: 171 TQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQN 230
+Q+H+ + K+ D + + L +Y KC + AR+VFD N+ WNS + Y +
Sbjct: 21 SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCRE 80
Query: 231 GPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
+ L +F M+ +G PD T+ + ACA L + G IH + +++ +D+
Sbjct: 81 KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+G+ALV++Y+KCG++ EA VF+ + V TSMV+GY
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY-------------------- 180
Query: 350 VVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
QN + EEAL LF +++ + V T ++++ACA L +++ G H
Sbjct: 181 -----------QQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVH 229
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
V++ + D+ + NSL+++Y K G + +F M E+D +SW+ MI A
Sbjct: 230 GLVIRREF------DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA 283
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
N EAL LF +M+ +P+ VT++ L AC+ + +EEG+K ++ G
Sbjct: 284 NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK-IHKIAVWKGFELDF 342
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
T ++D+ + C DEA L + +P + D V W +LL+
Sbjct: 343 SVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSG 382
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 207/404 (51%), Gaps = 40/404 (9%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
+ ++ D LD ++ +C + +V VH +I+ +F ++ + N L+++YAK
Sbjct: 195 QMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKT 254
Query: 68 GCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA 127
GC A +F KM K+V +W ++M++ +A
Sbjct: 255 GCEKIAANLFSKMPEKDVISW-------------------------------STMIACYA 283
Query: 128 QHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVY 187
++ +EAL F +M + F + + SAL ACA S + + G ++H + + D
Sbjct: 284 NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFS 343
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ +ALIDMY KC A +F + ++++VSW +L++ Y QNG A ++ VF M++ G
Sbjct: 344 VSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDG 403
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
I+PD V + +++A + L F++ L +H ++R +++ +G +L+++Y+KCG L +A
Sbjct: 404 IQPDAVAVVKILAASSELGIFQQALCLHGYVVR-SGFNSNVFVGASLIELYSKCGSLGDA 462
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER-----NVVSWNALIAGYTQ 362
+F M +R+VV +SM++ Y A +F +M++ N V++ ++++ +
Sbjct: 463 VKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSH 522
Query: 363 NGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
G EE L +F R++ + P FG +++ + QLG+
Sbjct: 523 AGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIG--QLGK 564
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA L SC + + +H ++ ++++F+ L+D+YAKCG + AR VFDKM
Sbjct: 822 PFA--LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKM 879
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
+ +++ +W SM+SG+A + SE LG+F
Sbjct: 880 AVRDLVSW-------------------------------TSMISGYAHNGYNSETLGFFD 908
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
M S + S S L AC + G H+ + ++ + D+ + +A++DMY KCG
Sbjct: 909 LMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 968
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ AR +FD +++V W+++I Y +G A+++F +M+ +G+ P VT V+S
Sbjct: 969 SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 1028
Query: 261 ACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ +EG +++ +LM E + L +VD+ + G+L+EA + + MP+
Sbjct: 1029 ACSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPV 1084
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 177/402 (44%), Gaps = 86/402 (21%)
Query: 294 LVDMYAKCGKLNEARCV-------FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
LVD++ C N R V F + + T + S YAK +S+++AR +F +
Sbjct: 7 LVDLFQAC---NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC-----PTHYTFGNLLNACANLADL 401
NV WN+ + Y + + EE L LF L+ +C P ++T L ACA L L
Sbjct: 64 HPNVHLWNSTLRSYCREKQWEETLRLFHLM----ICTAGEAPDNFTIPIALKACAGLRML 119
Query: 402 QLGRQAHTHVVKHGLRFLSGE-ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
+LG+ V HG + E SD+FVG++L+++Y KCG + + ++FE D V W
Sbjct: 120 ELGK------VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLW 173
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCG-EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
+M+ G QN EAL LF +M++ D VT++ V+ AC+ V+ G S
Sbjct: 174 TSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAG-------S 226
Query: 520 KEHGLAPLKDH------YTCMVDLLGRAGCLDEAKTLIEAMP------------------ 555
HGL ++ +++L + GC A L MP
Sbjct: 227 CVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 286
Query: 556 ----------------MQPDAVIWGSLLAACKVHRNIMLGEYVAK----KLLEIEPSNSG 595
+P++V S L AC V RN+ G+ + K K E++ S S
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVS- 345
Query: 596 PYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
L +MY + E V + + + K+ VV SW+ +L
Sbjct: 346 --TALIDMYMKCSCPDEAVDLFQRLPKKDVV-----SWVALL 380
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
++ H + +GL++ +S I ++ MY+ ++ +FE + WN MI
Sbjct: 737 KKTHAKIFAYGLQY----DSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMI 790
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
G A +G +L L+ KM+ G KPD L +C+ ++ G+
Sbjct: 791 RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGK------------ 838
Query: 525 APLKDHYTC------------MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ H C +VD+ + G ++ A+ + + M ++ D V W S+++
Sbjct: 839 -VIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISG 893
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 283/483 (58%), Gaps = 39/483 (8%)
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG VS AR VFD M R++VSW LI Y QN ++A+ + M+ + P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++ A + G Q+HA ++ D+ +G+AL+DMYA+C +++ A VFD
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVK-YNWDEDVYVGSALLDMYARCEQMDMAIMVFD-- 117
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+++ +N VSWNALIAG+ + + E L F
Sbjct: 118 -----------------------------RLVSKNEVSWNALIAGFARKADGETTLMKFA 148
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
++R TH+T+ ++ +A A + L+ GR H H++K SG++ FVGN+++
Sbjct: 149 EMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIK------SGQKLTAFVGNTMLG 202
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY K GS+ D ++F+ M +RD V+WN M+ AQ G G EA+ F+++ CG + + +T
Sbjct: 203 MYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQIT 262
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ VL ACSH GLV+EG+ YF M K++ + P DHY VDLLGRAG L EA + M
Sbjct: 263 FLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKM 321
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
PM+P A +WG+LL AC++H+N +G+Y A + E++P ++GP VLL N+YA G+W +
Sbjct: 322 PMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAA 381
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
RVRK+M+ GV K+P CSW++I V++F+ D HP + +IY + + + +K+ GYVP
Sbjct: 382 RVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVP 441
Query: 675 NAS 677
N +
Sbjct: 442 NTA 444
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 39/372 (10%)
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGS 156
K G + DA +F MP RD SW +++G+AQ+ +EA+G M F + ++F S
Sbjct: 4 KCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTS 63
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L A +G Q+HAL K + DVY+GSAL+DMY +C ++ A VFD + +N
Sbjct: 64 LLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKN 123
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
VSWN+LI + + L F M +G T +S+ SA A + A ++G +HA
Sbjct: 124 EVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHA 183
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
L++ + V GN ++ MYAK G + +AR VFDRM R
Sbjct: 184 HLIKSGQKLTAFV-GNTMLGMYAKSGSMVDARKVFDRMDKR------------------- 223
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
++V+WN ++ Q G +EA+ F +++ + TF ++L AC+
Sbjct: 224 ------------DLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACS 271
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG-CRIFETMVER 455
+ ++ G+ + + ++ E D +V S +D+ + G +++ +F+ +E
Sbjct: 272 HGGLVKEGKHYFDMMKDYNVQ----PEIDHYV--SFVDLLGRAGLLKEALIFVFKMPMEP 325
Query: 456 DWVSWNAMIVGC 467
W A++ C
Sbjct: 326 TAAVWGALLGAC 337
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 144/295 (48%), Gaps = 32/295 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + S ++HA +K + ++++ + L+D+YA+C + A VFD++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+KN + SWN++++GFA+ L F +
Sbjct: 121 SKN-------------------------------EVSWNALIAGFARKADGETTLMKFAE 149
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + +++ S SA A + G VHA L KS ++G+ ++ MY K G
Sbjct: 150 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGS 209
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR+VFD M +R++V+WN+++T Q G +A+ F + GI+ +++T SV++A
Sbjct: 210 MVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTA 269
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
C+ KEG + + +M+ ++ ++ + VD+ + G L EA +MP+
Sbjct: 270 CSHGGLVKEG-KHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPM 323
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 341/666 (51%), Gaps = 93/666 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA + +C K V+ RR H ++K F S I++ N L+ +Y KC
Sbjct: 141 FATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKC-------------- 186
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
G +DA R+F + E ++ ++ +M+ G +Q ++ E L F
Sbjct: 187 -----------------GLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRL 229
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKM------------GTQVHALLSKSRYSSDVYMG 189
M + + S + L CA V F + G Q+H L K + D+++
Sbjct: 230 MLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLC 289
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
++L+DMY K G + A VF+ + + ++VSWN +I+ Y + ALE F RM G E
Sbjct: 290 NSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYE 349
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
PD+VT ++++AC K G QI C L+ NA++ Y + EA
Sbjct: 350 PDDVTYINMLTACVKSGDVKVGRQI----FDCMS-SPSLISWNAILSGYNQSADHGEAVE 404
Query: 310 VFDRMPIR---------------------------------------NVVSETSMVSGYA 330
+F +M + +V +S+++ Y+
Sbjct: 405 LFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYS 464
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
K ++ ++ +F+K+ E +VV WN++IAG++ N ++AL F+ +++ P+ ++F
Sbjct: 465 KCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFAT 524
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+ ++CA L+ L G+Q H ++K G ++FVG+SL++MY KCG V F+
Sbjct: 525 IASSCAKLSSLFQGQQIHAQIIKDGYV------DNVFVGSSLVEMYCKCGDVGAARYYFD 578
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
M ++ V+WN MI G A NGYG EA+ L+K M+ GEKPD +T + VL ACSH+ LV+E
Sbjct: 579 MMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDE 638
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
G + FSSM ++ + P DHYTC++D LGR G +E + +++ MP + D ++W +L++C
Sbjct: 639 GVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSC 698
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
+VH N+ L + A++L + P NS PYVLL+NMY+ +GRW + VR LM + K PG
Sbjct: 699 RVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPG 758
Query: 631 CSWIEI 636
S E
Sbjct: 759 YSRSEF 764
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 302/592 (51%), Gaps = 57/592 (9%)
Query: 24 KLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL SC+ +KS+S + +HARI + S+ F+ N LID+Y+KC + A VFDK+ +K
Sbjct: 10 NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG-YFVKM 142
N+F++N+I++ K + A RLF MPER+ S N++++ ++ +AL Y + M
Sbjct: 70 NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
E+ S +F + SAC G D G + H L+ K + S++Y+ +AL+ MY KCG
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A RVF+G+ E N V++ +++ Q + LE+F M+ GI D V+L++++ C
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVIC 249
Query: 263 ASLAAF------------KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
A +F +G QIH ++ DL L N+L+DMYAK G ++ A V
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVK-HGFERDLHLCNSLLDMYAKTGDMDSAENV 308
Query: 311 FDRMPIRNVVSETSMVSGYA-----------------------------------KASSV 335
F+ + +VVS M+SGY K+ V
Sbjct: 309 FENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDV 368
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K R +F M +++SWNA+++GY Q+ ++ EA+ LFR ++ + P T +L++C
Sbjct: 369 KVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSC 428
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A L L+ G+Q H K G D++V +SLI++Y KCG +E +F + E
Sbjct: 429 AELGLLEAGKQVHAVSQKLGFY------DDVYVASSLINVYSKCGKMEVSKHVFSKLSEL 482
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D V WN+MI G + N +AL FK+M G P + + +C+ + +G++
Sbjct: 483 DVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIH 542
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+ + K+ G + +V++ + G + A+ + MP + + V W ++
Sbjct: 543 AQIIKD-GYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK-NIVTWNEMI 592
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 183/336 (54%), Gaps = 24/336 (7%)
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+E + L +++ +C + + IHAR+ R L +D L N L+D+Y+KC ++ A
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRF-TLFSDTFLCNHLIDLYSKCNQITSA 59
Query: 308 RCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENE 367
VFD++P +N+ S +++S + K+++++ A +F +M ERN VS N +I +NG
Sbjct: 60 HHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYER 119
Query: 368 EALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
+AL + L+ ESV P+H TF + +AC L D+ GR+ H V+K G +S+I
Sbjct: 120 QALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGF------DSNI 173
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+V N+L+ MY KCG ED R+FE +VE + V++ M+ G +Q E L LF+ ML
Sbjct: 174 YVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRK 233
Query: 487 GEKPDHVTMIGVLCACSHA---GLVEEGR--------KYFSSMSKEHGLAPLKDHYTC-- 533
G D V++ +L C+ G+ ++ R K +++ +HG +D + C
Sbjct: 234 GICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFE--RDLHLCNS 291
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
++D+ + G +D A+ + E + + V W +++
Sbjct: 292 LLDMYAKTGDMDSAENVFENLD-KHSVVSWNIMISG 326
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 179/356 (50%), Gaps = 35/356 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + A +L SC + ++VHA K F ++++ + LI+VY+KCG + ++ VF
Sbjct: 417 DRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVF 476
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
K+S +V WN SM++GF+ + +AL
Sbjct: 477 SKLSELDVVCWN-------------------------------SMIAGFSINSLEQDALA 505
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M F SE+SF + S+CA G Q+HA + K Y +V++GS+L++MY
Sbjct: 506 CFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYC 565
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V AR FD M +NIV+WN +I Y NG +A+ ++ M++SG +PD++T +
Sbjct: 566 KCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVA 625
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC+ A EG++I + +++ ++ L ++D + G+ NE + D MP +
Sbjct: 626 VLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYK 685
Query: 318 N--VVSETSMVSG--YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+ +V E + S +A S K A ++ RN + L Y+ G ++A
Sbjct: 686 DDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDA 741
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/497 (40%), Positives = 299/497 (60%), Gaps = 31/497 (6%)
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y + R AR++FD M E N +SWN L++ Y QNG S+A +VF +M P+
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM------PER--- 54
Query: 256 ASVVSACASLAAF-KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+VVS A + + +EGL A L+ ++V ++ + G+++EAR +FD M
Sbjct: 55 -NVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMM 113
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG-------------YT 361
P+++VV+ T+M+ G + AR +F +M +RNVV+W ++I+G Y
Sbjct: 114 PVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYE 173
Query: 362 QNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSG 421
+ G EAL LF L++RE V P+ + ++L+ C +LA L GRQ H+ +V+ S
Sbjct: 174 RKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVR------SQ 227
Query: 422 EESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFK 481
+ DI+V + LI MY+KCG + R+F+ +D V WN++I G AQ+G+G +AL +F
Sbjct: 228 FDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 287
Query: 482 KMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
M PD +T IGVL ACS+ G V+EG + F SM ++ + P +HY CMVDLLGRA
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRA 347
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS 601
G L+EA LIE MP++ DA++WG+LL AC+ H+N+ L E AKKLL++EP+N+GPY+LLS
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLS 407
Query: 602 NMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFM-VKDKRHPLNKEIYLVL 660
N+Y+ RW +VV +RK MR + + K PGCSWIE+ V++F HP ++ I L
Sbjct: 408 NLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKL 467
Query: 661 KMLTREMKRVGYVPNAS 677
L ++ GY P+ S
Sbjct: 468 GKLGALLREAGYCPDGS 484
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 192/415 (46%), Gaps = 71/415 (17%)
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARK+FDKM N +WN +++G ++ G I +A ++F MPER+ SW +M+ G+ Q
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLI 72
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
EA F +M N G + G VD Q+ ++ DV + +
Sbjct: 73 EEAELLFWRMPERNVVSWTVMLGGLIE--DGRVD--EARQLFDMMP----VKDVVASTNM 124
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT-------------CYEQNGPASDALEV 239
ID GR+ AR +FD M +RN+V+W S+I+ YE+ G +AL +
Sbjct: 125 IDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALAL 184
Query: 240 FVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
F M G+ P ++ SV+S C SLA+ G Q+H++L+R + D+ + + L+ MY
Sbjct: 185 FSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQ-FDIDIYVSSVLITMYI 243
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAG 359
KCG L A+ VFDR +++V S+++GYA
Sbjct: 244 KCGDLVTAKRVFDRFSSKDIVMWNSIIAGYA----------------------------- 274
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
Q+G E+AL +F + S+ P TF +L+AC ++T VK GL
Sbjct: 275 --QHGFGEKALEVFHDMFSSSIAPDEITFIGVLSAC-----------SYTGKVKEGLEIF 321
Query: 420 SGEESDIFVGNS------LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+S V ++D+ + G + + + E M VE D + W A++ C
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGAC 376
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 35/203 (17%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VH+++++SQF +I++ + LI +Y KCG L A++VFD+ S+K+
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKD 262
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+ WNSII G +AQH +AL F M S
Sbjct: 263 IVMWNSIIAG-------------------------------YAQHGFGEKALEVFHDMFS 291
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG--SALIDMYGKCGRV 202
+ A E +F LSAC+ + K G ++ + KS+Y D + ++D+ G+ G++
Sbjct: 292 SSIAPDEITFIGVLSACSYTGKVKEGLEIFESM-KSKYQVDPKTEHYACMVDLLGRAGKL 350
Query: 203 SCARRVFDGMR-ERNIVSWNSLI 224
+ A + + M E + + W +L+
Sbjct: 351 NEAMNLIENMPVEADAIVWGALL 373
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/647 (33%), Positives = 345/647 (53%), Gaps = 73/647 (11%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFD 78
+ + LL C ++K++ +HA ++K+ S++F+ N ++++YAKCG AR+V
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV-- 60
Query: 79 KMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGY 138
F M E++ SW++M+SG+ Q A+
Sbjct: 61 -----------------------------FDEMFEKNLVSWSAMISGYDQAGEPQMAIDL 91
Query: 139 FVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK 198
+ +M +EY F S +SACA +G ++H+ K Y S ++ ++LI MY K
Sbjct: 92 YSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMK 148
Query: 199 CGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASV 258
C + S A VF E N VS+N+LIT + +N LE F M G+ PD V
Sbjct: 149 CNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208
Query: 259 VSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+ C + K G ++H + ++ L + +GN ++ MY++ + EA
Sbjct: 209 LGICTTTENLKRGAELHCQTVKL-NLDSTPFIGNVIITMYSELNLIQEAE---------- 257
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKR 378
K+ RL+ E++V+SWN LIA + ++ + L +F+ +
Sbjct: 258 -----------------KAFRLI----EEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE 296
Query: 379 ES-VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
E+ V P +TF + L ACA LA + G+Q H H+++ L D+ VGN+L++MY
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLY------QDLGVGNALVNMYA 350
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + IF MV + VSWN +I G +G G A+ LF++M G +PD VT IG
Sbjct: 351 KCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIG 410
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC+HAGLV++G+ YF+SM + +G+AP +H++C++D+LGRAG L+EA+ + P
Sbjct: 411 LLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFW 470
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
D V+ SLL+A ++H ++++GE +AK LL+++P + PYVLLSN+YA G W V R
Sbjct: 471 NDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEAR 530
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLT 664
K ++ G+ K+PG S IE+ G V F + D H KEI +LK L+
Sbjct: 531 KRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 32/302 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L C ++++ +H + +K S FI N +I +Y++ + A K F
Sbjct: 201 DRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAF 260
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ K+V +WN++I CS D ++ L
Sbjct: 261 RLIEEKDVISWNTLIAA----------------------CS---------HCDDHAKGLR 289
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F M E N +++F SAL+ACAG G Q+HA L ++R D+ +G+AL++MY
Sbjct: 290 VFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMY 349
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + A +F M N+VSWN++I + +G A+E+F +M ASGI PD VT
Sbjct: 350 AKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFI 409
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+++AC +G + + D+ + L+DM + G+LNEA + P
Sbjct: 410 GLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPF 469
Query: 317 RN 318
N
Sbjct: 470 WN 471
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/590 (35%), Positives = 323/590 (54%), Gaps = 39/590 (6%)
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
F I L +G ++ A + F + E D WN+++ G+ Q + + ++ M
Sbjct: 20 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
+ ++F L AC G+ +G Q+H K + S+V++ ++L+ MY K G++S A
Sbjct: 80 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R VFD + +R +VSW S+I+ Y QNG +AL VF M ++PD + L SV++A ++
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSM 325
+G IH + K G E V +S T+M
Sbjct: 200 EDLGQGKSIHG--------------------LVTKLGLEFEPDIV---------ISLTTM 230
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTH 385
YAK V+ AR F +M + N++ WNA+I+GY NG EEA+ LFR + +++
Sbjct: 231 ---YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 287
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
T + + A A + L+L R ++ K R D FV LIDMY KCGS+
Sbjct: 288 ITMRSAVLASAQVGSLELARWLDGYISKSEYR------DDTFVNTGLIDMYAKCGSIYLA 341
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA 505
+F+ + ++D V W+ MI+G +G+G EA+ L+ +M G P+ T IG+L AC ++
Sbjct: 342 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 401
Query: 506 GLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGS 565
GLV+EG + F M +HG+ P HY+C+VDLLGRAG L++A I +MP++P +WG+
Sbjct: 402 GLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 460
Query: 566 LLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
LL+ACK+HR + LGE A++L ++P N+G YV LSN+YA W V VR +M ++G+
Sbjct: 461 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 520
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
K G S IEI G++ F V D+ HP +KEI+ L L + +K GYVP+
Sbjct: 521 NKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPH 570
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 197/447 (44%), Gaps = 70/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + +++H + K F S +F+QN L+ +YAK G + AR VFDK+
Sbjct: 88 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 147
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ V +W SII SG+ Q+ EAL F +
Sbjct: 148 DRTVVSWTSII-------------------------------SGYVQNGDPMEALNVFKE 176
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N + S ++A D G +H L++K + + +L MY K G
Sbjct: 177 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 236
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR F+ M + N++ WN++I+ Y NG +A+++F M+ I D +T+ S V A
Sbjct: 237 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 296
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + + + + + + E R+D + L+DMYAKCG + ARCVFDR+ ++V
Sbjct: 297 SAQVGSLELARWLDGYISKSE-YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDV-- 353
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
V W+ +I GY +G +EA+ L+ +K+ V
Sbjct: 354 -----------------------------VLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
CP TF LL AC N ++ G + + HG+ S ++D+ + G
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYS------CVVDLLGRAGY 438
Query: 442 VEDGCRIFETMVERDWVS-WNAMIVGC 467
+ +M + VS W A++ C
Sbjct: 439 LNQAYDFIMSMPIKPGVSVWGALLSAC 465
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/620 (34%), Positives = 336/620 (54%), Gaps = 76/620 (12%)
Query: 19 SSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGC-LYGARKVF 77
S+ +A LL +C + S + HA ++KS ++ + N L+ +Y K G + R+VF
Sbjct: 60 SNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVF 119
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D M F+ DA SW SM+SG+ +AL
Sbjct: 120 DGM-------------------FVKDA------------ISWTSMMSGYVASKEHVKALE 148
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
FV+M S ++++ SA+ AC + ++G H ++ + + + S L MYG
Sbjct: 149 VFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYG 208
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLA 256
ARRVFD M E +++ W ++++ + +N +AL +F M G+ PD T
Sbjct: 209 VNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 268
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V++AC +L K+G +IH +L+ N +
Sbjct: 269 TVLTACGNLRRLKQGKEIHGKLIT-----------NGIGS-------------------- 297
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
NVV E+S++ Y K+ SV+ AR +F M +N+VSW+AL+ GY QNGE+E+A+ +FR +
Sbjct: 298 -NVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREM 356
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + + Y FG +L ACA LA ++LG++ H V+ G ++ V ++LID+Y
Sbjct: 357 EEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF------GNVIVESALIDLY 406
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
K G ++ R++ M R+ ++WNAM+ AQNG G EA+ F M+ G KPD+++ I
Sbjct: 407 GKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 466
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
VL AC H GLVEEGR YF+ M+K +G+ P +HY+CM+DLLGRAG +EA+ L++
Sbjct: 467 AVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAEC 526
Query: 557 QPDAVIWGSLLAACKVHRNI-MLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
+ DA +WG LL C + + + E +AK+++E+EP YVLLSNMY +GR G+ ++
Sbjct: 527 RNDASLWGVLLGPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALK 586
Query: 616 VRKLMRKRGVVKQPGCSWIE 635
+RKLM +RGV K G SWI+
Sbjct: 587 IRKLMVRRGVAKTVGQSWID 606
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 220/441 (49%), Gaps = 46/441 (10%)
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+ ++A+ HS + + S L C F G Q HA + KS +D +G+
Sbjct: 40 QLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGN 99
Query: 191 ALIDMYGKCG-RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
+L+ +Y K G + RRVFDGM ++ +SW S+++ Y + ALEVFV M++ G++
Sbjct: 100 SLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQ 159
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
P++ TL+S V AC L + G H ++ + V+ + L MY + +AR
Sbjct: 160 PNKFTLSSAVKACFELGEVRLGRCFHGVVI-THGFEWNHVISSTLAYMYGVNKEPVDARR 218
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
VFD MP E +V+ W A+++ +++N EEA
Sbjct: 219 VFDEMP-------------------------------EPDVICWTAVLSAFSKNDLYEEA 247
Query: 370 LGLFRLLKR-ESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
LGLF + R + + P TFG +L AC NL L+ G++ H ++ +G+ S++ V
Sbjct: 248 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI------GSNVVV 301
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
+SL+DMY K GSV + ++F M ++ VSW+A++ G QNG +A+ +F++M E
Sbjct: 302 ESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREM----E 357
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
+ D VL AC+ V G++ + + + ++DL G++GC+D A
Sbjct: 358 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE-SALIDLYGKSGCIDYAS 416
Query: 549 TLIEAMPMQPDAVIWGSLLAA 569
+ M ++ + + W ++L+A
Sbjct: 417 RVYSKMSVR-NMITWNAMLSA 436
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 40/372 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S F +L +C + + + +H ++I + S + +++ L+D+Y K G + AR+VF
Sbjct: 263 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVF 322
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M KN+ +W++++ G + G + A +F M E+D
Sbjct: 323 NGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEKDL--------------------- 361
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
Y FG+ L ACAG ++G ++H + +V + SALID+YG
Sbjct: 362 --------------YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYG 407
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G + A RV+ M RN+++WN++++ QNG +A+ F M+ GI+PD ++ +
Sbjct: 408 KSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIA 467
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC +EG A + + ++ + ++D+ + G EA + DR R
Sbjct: 468 VLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECR 527
Query: 318 NVVSETSMVSGYAKASSVKS--ARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGL 372
N S ++ G A++ S A + +M+E + +S+ L Y G + +AL +
Sbjct: 528 NDASLWGVLLGPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKI 587
Query: 373 FRLLKRESVCPT 384
+L+ R V T
Sbjct: 588 RKLMVRRGVAKT 599
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 42/341 (12%)
Query: 231 GPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
G +DA+ + +S I AS++ C + +F GLQ HA +++ L D +
Sbjct: 39 GQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVK-SGLETDRNV 97
Query: 291 GNALVDMYAKCGK-LNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
GN+L+ +Y K G + E R VFD M +++ +S TSM+SGY +
Sbjct: 98 GNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASK---------------- 141
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHT 409
E+ +AL +F + + P +T + + AC L +++LGR H
Sbjct: 142 ---------------EHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHG 186
Query: 410 HVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQ 469
V+ HG E + + ++L MY D R+F+ M E D + W A++ ++
Sbjct: 187 VVITHGF------EWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSK 240
Query: 470 NGYGTEALGLFKKMLLC-GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
N EALGLF M G PD T VL AC + +++G++ + +G+
Sbjct: 241 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT-NGIGSNV 299
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ ++D+ G++G + EA+ + MP + + V W +LL
Sbjct: 300 VVESSLLDMYGKSGSVREARQVFNGMP-RKNIVSWSALLGG 339
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 45/286 (15%)
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG-SVEDGC 446
+ +LL C + G Q H HVVK GL E+D VGNSL+ +Y K G + +
Sbjct: 63 YASLLQTCRKVFSFIHGLQFHAHVVKSGL------ETDRNVGNSLLSLYFKLGPDMRETR 116
Query: 447 RIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
R+F+ M +D +SW +M+ G + +AL +F +M+ G +P+ T+ + AC G
Sbjct: 117 RVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELG 176
Query: 507 LVEEGR---------------------KYFSSMSKEHGLA-------PLKDH--YTCMVD 536
V GR Y ++KE A P D +T ++
Sbjct: 177 EVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLS 236
Query: 537 LLGRAGCLDEAKTLIEAMP----MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
+ +EA L AM + PD +G++L AC R + G+ + KL I
Sbjct: 237 AFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL--ITNG 294
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
V+ S++ G+ G V R++ G+ ++ SW +LG
Sbjct: 295 IGSNVVVESSLLDMYGKSGSVREARQVF--NGMPRKNIVSWSALLG 338
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/528 (37%), Positives = 294/528 (55%), Gaps = 38/528 (7%)
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
++ L CA +G H L +D + LI++Y KCG+ CARRVFD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M R+I+SWN++I Y N +AL++F RM G + E TL+S + ACA+ A E
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
Q+H ++ L + +G A +D+YAKC + +A VF+ MP
Sbjct: 177 KQLHTIAIKL-ALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP---------------- 219
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
E+ V+W++L AG+ QNG +EE L LF+ +RE + T +T ++
Sbjct: 220 ---------------EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSI 264
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L+ CA+LA + G Q H +VKHG ++FV SL+D+Y KCG +E +F
Sbjct: 265 LSTCASLALIIEGTQVHAVIVKHGF------HRNLFVATSLVDVYAKCGQIEKSYEVFAD 318
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M E++ V WNAMI +++ + EA+ LF+KM G P+ VT + +L ACSH GLVEEG
Sbjct: 319 MEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEG 378
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
R YF+ + + P HY+CMVD+LGR+G DEA L++ MP +P A +WGSLL + +
Sbjct: 379 RHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSR 438
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H+NI L A++L +EP N G +VLLSN+YA G W VV RK +R G K+ G
Sbjct: 439 IHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGR 498
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
SWIE G ++VF+ ++ HP ++Y L+ + EM+++ + N D
Sbjct: 499 SWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCD 546
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 36/365 (9%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+D +LL C + +S+ + H I ++ N LI++Y KCG
Sbjct: 53 LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCG------- 105
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+N D A R+F +M R SWN+M++G+ + EA
Sbjct: 106 -------QN-----------------DCARRVFDAMSVRSIISWNTMIAGYTHNREDVEA 141
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
L F +MH E ++E++ S L ACA Q+H + K S ++G+A +D+
Sbjct: 142 LKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDV 201
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KC + A VF+ M E+ V+W+SL + QNG + L +F G++ E T+
Sbjct: 202 YAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTV 261
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S++S CASLA EG Q+HA +++ RN L + +LVD+YAKCG++ ++ VF M
Sbjct: 262 SSILSTCASLALIIEGTQVHAVIVKHGFHRN-LFVATSLVDVYAKCGQIEKSYEVFADME 320
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLE----RNVVSWNALIAGYTQNGENEEALG 371
+NVV +M++ +++ + A ++F KM + N V++ ++++ + G EE
Sbjct: 321 EKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRH 380
Query: 372 LFRLL 376
F LL
Sbjct: 381 YFNLL 385
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 31/296 (10%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L +C ++ + +++H IK S F+ +DVYAKC
Sbjct: 164 LCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCN----------------- 206
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
I DA +F +MPE+ +W+S+ +GF Q+ E L F E
Sbjct: 207 --------------MIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQRE 252
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
L+E++ S LS CA GTQVHA++ K + ++++ ++L+D+Y KCG++ +
Sbjct: 253 GMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKS 312
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
VF M E+N+V WN++I + ++ + +A+ +F +M GI P+EVT S++SAC+
Sbjct: 313 YEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHT 372
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+EG L+ +++ + +VD+ + GK +EA + D+MP S
Sbjct: 373 GLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTAS 428
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 33/204 (16%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ +L +C + + +VHA I+K F +F+ L+DVYAKCG + + +VF M
Sbjct: 262 SSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEE 321
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
KNV W N+M++ F++H EA+ F KM
Sbjct: 322 KNVVLW-------------------------------NAMIASFSRHAHSWEAMILFEKM 350
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMYGKCGR 201
+E ++ S LSAC+ + + G LL R + +V S ++D+ G+ G+
Sbjct: 351 QQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGK 410
Query: 202 VSCARRVFDGMR-ERNIVSWNSLI 224
A ++ D M E W SL+
Sbjct: 411 TDEAWKLLDKMPFEPTASMWGSLL 434
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/646 (34%), Positives = 342/646 (52%), Gaps = 52/646 (8%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L SC +S R++H+ I K FIQN LI++YAKCG + A+ +FD + +
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+ N +++G ++ G ID+A +LF MP + S+ +M+ GF Q+ F EAL F M S
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
++ + + +SAC+ + VH L+ K V + + L+ Y C V A
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREA 239
Query: 206 RRVFDGMRERNIVSWN-------------------------------SLITCYEQNGPAS 234
RR+FD M ERN+V+WN ++I Y Q G
Sbjct: 240 RRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLR 299
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR----CEKLRNDLVL 290
+ALE++ M+ +G P+EV + ++VSAC A +G Q+H +++ C +
Sbjct: 300 EALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF-----I 354
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
++ YA CG ++ A F+ ++ S ++ +G+ K + A F KM R+V
Sbjct: 355 QTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDV 414
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
SW+ +I+GY Q+ + AL LF + + P T ++ +A A L LQ G+ AH +
Sbjct: 415 FSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEY 474
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS----WNAMIVG 466
+ + F + +LIDMY KCGS+ + F + RD VS WNA+I G
Sbjct: 475 MRSESIPFNDNLRA------ALIDMYAKCGSINSALQFFNQI--RDEVSSVSPWNAIICG 526
Query: 467 CAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAP 526
A +G+ + L +F M KP+ +T IGVL AC HAGLVE G++ F +M + + P
Sbjct: 527 LASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEP 586
Query: 527 LKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
HY CM+D+LGRAG L+EA+ +I +MPM+ D VIWG+LLAAC+ H N+ +GE A+ L
Sbjct: 587 DIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENL 646
Query: 587 LEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCS 632
+ PS+ G VLLSN+YA G+W EV VR +M+ + + ++PG S
Sbjct: 647 ARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 264/559 (47%), Gaps = 71/559 (12%)
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG---- 200
+N SE + SAL +C+ G Q+H+L+ K + ++ ++LI+MY KCG
Sbjct: 47 QNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKN 106
Query: 201 ------------RVSC---------------ARRVFDGMRERNIVSWNSLITCYEQNGPA 233
VSC AR++FD M + VS+ ++I + QNG
Sbjct: 107 AQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFF 166
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+ALEVF M + G+ P+++TL +V+SAC+ L +H +++ + +V N
Sbjct: 167 REALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTN- 225
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
L+ Y C + EAR +FD MP RN+V+ M++GYAK V AR +F + +++V+SW
Sbjct: 226 LMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISW 285
Query: 354 NALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVK 413
+I GY Q G EAL ++R + + P NL++AC + G Q H VVK
Sbjct: 286 GTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVK 345
Query: 414 HG-------------------------LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
G L+F G + + N+L ++K G ++ +
Sbjct: 346 RGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKT 405
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F+ M RD SW+ MI G AQ+ + AL LF KML G KP+ VTM+ V A + G +
Sbjct: 406 FDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTL 465
Query: 509 EEGRKYFSSMSKEHGLAPLKDHY-TCMVDLLGRAGCLDEAKTLIEAMPMQPDAV-IWGSL 566
+EG+ M E P D+ ++D+ + G ++ A + + +V W ++
Sbjct: 466 QEGKLAHEYMRSES--IPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAI 523
Query: 567 LA--ACKVHRNIMLGEYVAKKLLEIEPSN-SGPYVLLSNMYAELGRWGEVVRVRKLMRK- 622
+ A H ++ L + + I+P+ + VL + +A L G+ R+ K M+
Sbjct: 524 ICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGK--RIFKTMKSA 581
Query: 623 ---RGVVKQPGCSWIEILG 638
+K GC I+ILG
Sbjct: 582 YNVEPDIKHYGC-MIDILG 599
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 226/499 (45%), Gaps = 73/499 (14%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
RS + DL ++ ++ +C V + R VH ++K + + L+ Y
Sbjct: 177 RSCGVVPNDLTLVN------VISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
C + AR++FD+M +N+ TWN ++ G K G +D+A LF + ++D SW +M+
Sbjct: 231 CLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMID 290
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
G+ Q R EAL + M +E + +SAC G Q+H + K +
Sbjct: 291 GYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDC 350
Query: 185 DVYMGSALIDMYGKCG--RVSC-----------------------------ARRVFDGMR 213
++ + +I Y CG ++C A + FD M
Sbjct: 351 YNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMH 410
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
R++ SW+++I+ Y Q+ ALE+F +M+A GI+P+EVT+ SV SA A+L +EG
Sbjct: 411 VRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKL 470
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
H MR E + + L AL+DMYAKCG +N A F++ IR+ VS S
Sbjct: 471 AH-EYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQ--IRDEVSSVS--------- 518
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
WNA+I G +G L +F ++R + P TF +L+
Sbjct: 519 ------------------PWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLS 560
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM- 452
AC + ++ G++ + ++ E DI +ID+ + G +E+ + +M
Sbjct: 561 ACCHAGLVESGKR-----IFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMP 615
Query: 453 VERDWVSWNAMIVGCAQNG 471
+E D V W ++ C +G
Sbjct: 616 MEADIVIWGTLLAACRTHG 634
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 322/584 (55%), Gaps = 39/584 (6%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I L +G ++ A + F + E D WN+++ G+ Q + + ++ M +
Sbjct: 41 INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 100
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
++F L AC G+ +G Q+H K + S+V++ ++L+ MY K G++S AR VFD
Sbjct: 101 FTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDK 160
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
+ +R +VSW S+I+ Y QNG +AL VF M ++PD + L SV++A ++ +G
Sbjct: 161 LHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 220
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
IH + K G E V +S T+M YAK
Sbjct: 221 KSIHG--------------------LVTKLGLEFEPDIV---------ISLTTM---YAK 248
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
V+ AR F +M + N++ WNA+I+GY NG EEA+ LFR + +++ T +
Sbjct: 249 RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSA 308
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
+ A A + L+L R ++ K R D FV LIDMY KCGS+ +F+
Sbjct: 309 VLASAQVGSLELARWLDGYISKSEYR------DDTFVNTGLIDMYAKCGSIYLARCVFDR 362
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
+ ++D V W+ MI+G +G+G EA+ L+ +M G P+ T IG+L AC ++GLV+EG
Sbjct: 363 VADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 422
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+ F M +HG+ P HY+C+VDLLGRAG L++A I +MP++P +WG+LL+ACK
Sbjct: 423 WELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 481
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+HR + LGE A++L ++P N+G YV LSN+YA W V VR +M ++G+ K G
Sbjct: 482 IHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGH 541
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
S IEI G++ F V D+ HP +KEI+ L L + +K GYVP+
Sbjct: 542 SSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPH 585
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 197/447 (44%), Gaps = 70/447 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F +L +C + +++H + K F S +F+QN L+ +YAK G + AR VFDK+
Sbjct: 103 FLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH 162
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ V +W SII SG+ Q+ EAL F +
Sbjct: 163 DRTVVSWTSII-------------------------------SGYVQNGDPMEALNVFKE 191
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M N + S ++A D G +H L++K + + +L MY K G
Sbjct: 192 MRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 251
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V AR F+ M + N++ WN++I+ Y NG +A+++F M+ I D +T+ S V A
Sbjct: 252 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 311
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
A + + + + + + E R+D + L+DMYAKCG + ARCVFDR+ ++V
Sbjct: 312 SAQVGSLELARWLDGYISKSE-YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDV-- 368
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
V W+ +I GY +G +EA+ L+ +K+ V
Sbjct: 369 -----------------------------VLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
CP TF LL AC N ++ G + + HG+ S ++D+ + G
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYS------CVVDLLGRAGY 453
Query: 442 VEDGCRIFETMVERDWVS-WNAMIVGC 467
+ +M + VS W A++ C
Sbjct: 454 LNQAYDFIMSMPIKPGVSVWGALLSAC 480
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/669 (33%), Positives = 343/669 (51%), Gaps = 77/669 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+ VHA ++K I++ L+D+Y KCG
Sbjct: 201 KSVHAYVVKMGLGGCIYVATSLLDMYGKCG------------------------------ 230
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
++A ++F + E++ +WNSM+ F Q+ +EA+ F +M E A ++ + S L
Sbjct: 231 -LCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFL 289
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SA A G Q HAL S +GS+LI+ Y K G V A VF M E++ V
Sbjct: 290 SASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTV 349
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WN L++ Y NG AL++ M + + D VTLAS+++A A K G + H+
Sbjct: 350 TWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFC 409
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R L +D+ + ++++DMYAKC KL AR VFD R+++ ++++ YA+
Sbjct: 410 VR-NNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGET 468
Query: 339 RLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL-- 392
+F +M L NV+SWN++I G G+ ++A F ++ +CP T+ L+
Sbjct: 469 LKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICG 528
Query: 393 ---------------------------------NACANLADLQLGRQAHTHVVKHGLRFL 419
+AC+ +A L GR H ++ +H L
Sbjct: 529 LAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVS 588
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
+ V SL++MY KCGS+ R+F+ +++++ +NAMI G A +G EAL L
Sbjct: 589 TP------VLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSL 642
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
F+++ KPD +T +L AC HAGLV EG + F M H + +HY C+V +L
Sbjct: 643 FRRLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILS 702
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
R+ LDEA +I MP +PDA I+GSLLAAC+ H + L E + ++LL++EP NSG YV
Sbjct: 703 RSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVA 762
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLV 659
LSN YA G W E +VR LM++R + K PG S I+I +VF DK H KEIY++
Sbjct: 763 LSNAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMM 822
Query: 660 LKMLTREMK 668
L +L EM+
Sbjct: 823 LALLRVEMQ 831
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 305/608 (50%), Gaps = 76/608 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKS--QFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ +LL C+ +++S +++H RI+K+ A +I+ +L+ Y+KC A ++F K
Sbjct: 81 YGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGK 140
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +N F+W +I+ GL SR+ GF Q EAL F
Sbjct: 141 LQVQNEFSWAAIM-GL--------KSRM-----------------GFNQ-----EALMGF 169
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+MH L + A A G VHA + K +Y+ ++L+DMYGKC
Sbjct: 170 REMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKC 229
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G A++VFD + E+NIV+WNS+I + QNG ++A+E F M G+ P +VTL+S +
Sbjct: 230 GLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFL 289
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA A+L+ EG Q HA L L +LG++L++ Y+K G + +A VF M
Sbjct: 290 SASANLSVIDEGKQGHA-LAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEM----- 343
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
LE++ V+WN L++GY NG + AL L +++ E
Sbjct: 344 --------------------------LEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSE 377
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ T +++ A A+ +L+LG++ H+ V++ L ESD+ V +S+IDMY KC
Sbjct: 378 NLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNL------ESDVAVASSIIDMYAKC 431
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
+E R+F+ +RD + WN ++ A+ G+ E L LF +M L G P+ ++ V+
Sbjct: 432 EKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVI 491
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---M 556
+ G V++ + F M + G+ P +T ++ L + G DEA ++M +
Sbjct: 492 LGLLNKGKVDQAKDTFMEM-QSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGI 550
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL-LSNMYAELGRWGEVVR 615
+P+++ SLL+AC ++ G + + E S S P + L NMYA+ G + R
Sbjct: 551 KPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKR 610
Query: 616 VRKLMRKR 623
V ++ K+
Sbjct: 611 VFDMILKK 618
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 215/470 (45%), Gaps = 51/470 (10%)
Query: 108 FASMPERDQCSWNSM---VSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGS 164
F+ + Q S+ S +S + EAL + E+ + +G L C
Sbjct: 32 FSQIASNVQISYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYE 91
Query: 165 VDFKMGTQVHALLSKSRYS--SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
+G Q+H + K+ S + Y+ + L+ Y KC A R+F ++ +N SW +
Sbjct: 92 RALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAA 151
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
++ + G +AL F M G+ D + A +L G +HA +++
Sbjct: 152 IMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKM- 210
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + + +L+DMY KCG EA+ VFD++
Sbjct: 211 GLGGCIYVATSLLDMYGKCGLCEEAKKVFDKI---------------------------- 242
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
LE+N+V+WN++I +TQNG N EA+ F ++ E V PT T + L+A ANL+ +
Sbjct: 243 ---LEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVID 299
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
G+Q H L LSG E +G+SLI+ Y K G VED +F M+E+D V+WN
Sbjct: 300 EGKQG------HALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNL 353
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHA---GLVEEGRKYFSSMS 519
++ G NG AL L M + D VT+ ++ A + + L +EG + +
Sbjct: 354 LVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNN 413
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
E +A + ++D+ + L+ A+ + +A + D ++W +LLAA
Sbjct: 414 LESDVAVA----SSIIDMYAKCEKLECARRVFDATAKR-DLIMWNTLLAA 458
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 189/414 (45%), Gaps = 45/414 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS A ++ + S+++ + H+ +++ S++ + + +ID+YAKC L AR+V
Sbjct: 381 FDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRV 440
Query: 77 FDKMSNK-----------------------------------NVFTWNSIITGLLKWGFI 101
FD + + NV +WNS+I GLL G +
Sbjct: 441 FDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKV 500
Query: 102 DDASRLFASMPERDQC----SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
D A F M C +W +++ G AQ+ EA F M + S S
Sbjct: 501 DQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSL 560
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
LSAC+ G +H +++ S + +L++MY KCG ++ A+RVFD + ++ +
Sbjct: 561 LSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKEL 620
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+N++I+ Y +G A +AL +F R+ I+PDE+T S++SAC +EGL++
Sbjct: 621 PVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLELFID 680
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR-NVVSETSMVSGYAKASSVK 336
++ K+ LV + ++ L+EA + MP + S+++ + +
Sbjct: 681 MVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFE 740
Query: 337 SARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALGLFRLLKRESV--CPTH 385
+F ++L+ N ++ AL Y G +EA + L+K S+ P H
Sbjct: 741 LKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIPGH 794
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 309/519 (59%), Gaps = 21/519 (4%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYG--KCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
Q+HA K+ + ++ S L+ +Y K + AR +FD ++ R+++ WN++I CY +
Sbjct: 34 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 93
Query: 230 NGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
N + D + +F ++ + PD TL V+ CA L +EG QIH ++ +D+
Sbjct: 94 NQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKI-GFGSDVF 151
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIR-----------NVVSETSMVSGYAKASSVKSA 338
+ +LV+MY+KCG+++ AR VFD M + N+VS +M++GY K+ SA
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSA 211
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
+F +M ++V+WN +IAGY NG+ +A+ +F ++ + P+H T ++L+A + L
Sbjct: 212 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 271
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L GR H+++ K+G E D +G SLI+MY KCG +E +F + ++
Sbjct: 272 AVLGKGRWIHSYMEKNGF------ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVG 325
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
W A+IVG +G AL LF +M G KP+ + IGVL AC+HAGLV++GR+YF M
Sbjct: 326 HWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMM 385
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
E+ + P +HY C+VD+L RAG L+EAK IE MP+ P+ VIW SLL + H I +
Sbjct: 386 MNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDI 445
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
GEY A++++E+ P G Y+LLSNMYA G W +V VR++M KRG K PGCS +E G
Sbjct: 446 GEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKG 505
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++ F+V D HP KEIY + + ++K VG+VP+ +
Sbjct: 506 TLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTT 544
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 167/323 (51%), Gaps = 12/323 (3%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ ++ C R V + +++H +K F S++F+Q L+++Y+KCG + ARKVF
Sbjct: 114 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVF 173
Query: 78 DKMSNKNVFTWNSIITG-LLKW----------GFIDDASRLFASMPERDQCSWNSMVSGF 126
D M +K+V WNS+I G L+ W G D A LF MP D +WN M++G+
Sbjct: 174 DGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGY 233
Query: 127 AQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDV 186
+ +F +A+ F M S + S LSA +G G +H+ + K+ + D
Sbjct: 234 ELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDG 293
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
+G++LI+MY KCG + A VF ++++ + W ++I +G A+ AL +F+ M +
Sbjct: 294 ILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKT 353
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++P+ + V++AC +G Q +M K+ L LVD+ + G L E
Sbjct: 354 GLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEE 413
Query: 307 ARCVFDRMPIR-NVVSETSMVSG 328
A+ + MPI N V S++ G
Sbjct: 414 AKNTIENMPISPNKVIWMSLLGG 436
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 206/501 (41%), Gaps = 117/501 (23%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGA 73
+L + L +C + + ++HA +K+ + F+ +RL+ +Y+ K L A
Sbjct: 13 YLPHNLHLSLFQTC---SAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYA 69
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R +FD++ +++ WN+II ++ F D LF H+
Sbjct: 70 RSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLF--------------------HELVH 109
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
E L +NF L + CA + G Q+H L K + SDV++ +L+
Sbjct: 110 EYL-------PDNFTLP-----CVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLV 157
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSL------------------------------ 223
+MY KCG + CAR+VFDGM ++++V WNSL
Sbjct: 158 NMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQ 217
Query: 224 ------------ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
I YE NG DA+++F M+ G P TL SV+SA + LA +G
Sbjct: 218 MPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKG 277
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
IH+ M D +LG +L++MYAKCG
Sbjct: 278 RWIHS-YMEKNGFELDGILGTSLIEMYAKCG----------------------------- 307
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
++SA +F + ++ V W A+I G +G AL LF + + + P F +
Sbjct: 308 --CIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 365
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
LNAC + + GRQ ++ E + L+D+ + G +E+ E
Sbjct: 366 LNACNHAGLVDDGRQYFDMMMNE-----YKIEPTLEHYGCLVDILCRAGHLEEAKNTIEN 420
Query: 452 M-VERDWVSWNAMIVGCAQNG 471
M + + V W +++ G +G
Sbjct: 421 MPISPNKVIWMSLLGGSRNHG 441
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 219/625 (35%), Positives = 331/625 (52%), Gaps = 67/625 (10%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER--DQCSWNSMVSGFAQHDRFSEALGYF 139
+ F +N++++ + G +DDA RLF S D +WN+M+S Q R EA+
Sbjct: 189 GRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVL 248
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGK 198
M + +F SAL AC+ +G +VHA +L +++ ++ SAL+DMY
Sbjct: 249 YDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYAS 308
Query: 199 CGRVSCARRVFDGMRE--RNIVSWNSLITCYEQNGPASD-ALEVFVRMMA-SGIEPDEVT 254
+VS ARRVFD + E R + WN++I Y Q+G + A+E+F RM A +G P E T
Sbjct: 309 NEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETT 368
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+A V+ ACA F +H +++ + N V NAL+DMYA+ G+++EA +F +
Sbjct: 369 MAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFV-QNALMDMYARLGRMDEAHTIFAMI 427
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+R ++VSWN LI G G EA L R
Sbjct: 428 DLR-------------------------------DIVSWNTLITGCIVQGLISEAFQLVR 456
Query: 375 LLKRESVC--------------------PTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
++ S P + T LL CA LA G++ H + V+H
Sbjct: 457 EMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRH 516
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
L ESD+ VG++L+DMY KCG + +F+ + R+ ++WN +I+ +G G
Sbjct: 517 AL------ESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGD 570
Query: 475 EALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC 533
EAL LF +M+ GE P+ VT I L ACSH+GLV+ G + F M +++G P + C
Sbjct: 571 EALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHAC 630
Query: 534 MVDLLGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
+VD+LGRAG LDEA +I +M P + W ++L AC++HRN+ LG A++L E+EP
Sbjct: 631 VVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPD 690
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
+ YVLL N+Y+ G W VR +MR+RGV K+PGCSWIE+ G ++ FM + HP
Sbjct: 691 EASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPE 750
Query: 653 NKEIYLVLKMLTREMKRVGYVPNAS 677
+ +++ + L M+R GYVP+ S
Sbjct: 751 SAQVHAHMDALWERMRREGYVPDTS 775
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 242/554 (43%), Gaps = 112/554 (20%)
Query: 9 QIVGDLAFLDSSP----FAKLLDSCLRSKSVSDTRRVHARIIKSQ-FASEIFIQNRLIDV 63
Q++ D+ L P FA L +C R + + R VHA ++K A+ F+ + L+D+
Sbjct: 246 QVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDM 305
Query: 64 YAKCGCLYGARKVFDKMS--NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNS 121
YA + AR+VFD + + + WN++I G + G +D+
Sbjct: 306 YASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDE------------------ 347
Query: 122 MVSGFAQHDRFSEALGYFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
EA+ F +M +E A SE + L ACA S F VH + K
Sbjct: 348 ------------EAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKR 395
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+S+ ++ +AL+DMY + GR+ A +F + R+IVSWN+LIT G S+A ++
Sbjct: 396 DMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLV 455
Query: 241 VRMM-----ASG---IE------------PDEVTLASVVSACASLAAFKEGLQIHARLMR 280
M ASG +E P+ +TL +++ CA LAA G +IH +R
Sbjct: 456 REMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVR 515
Query: 281 CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARL 340
L +DL +G+ALVDMYAKCG L AR VFDR+P RN
Sbjct: 516 -HALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRN---------------------- 552
Query: 341 MFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCPTHYTFGNLLNACANLA 399
V++WN LI Y +G +EAL LF R++ P TF L AC
Sbjct: 553 ---------VITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAAC---- 599
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDI------FVGNSLIDMYMKCGSVEDGCRIFETMV 453
+H+ +V GL G + D ++ ++D+ + G +++ I +M
Sbjct: 600 -------SHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMA 652
Query: 454 --ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
E +W+ M+ C + LG L +PD + +LC A + E
Sbjct: 653 PGEHQVSAWSTMLGAC--RLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWEN 710
Query: 512 RKYFSSMSKEHGLA 525
M ++ G+A
Sbjct: 711 STEVRGMMRQRGVA 724
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 138/312 (44%), Gaps = 42/312 (13%)
Query: 251 DEVTLASVVSACASLAAFKEGLQIH-ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
D L + + A+L + IH A L R R + NAL+ YA+CG L+ A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
+F P R+ VS+N+LI+ A
Sbjct: 107 LFAATPPD-----------------------------LRDAVSYNSLISALCLFRRWGHA 137
Query: 370 LGLFR-LLKRESVCPTHYTFGNLLNACANLADL--QLGRQAHTHVVKHGLRFLS-GEESD 425
L R +L V + +T ++L AC++LAD +LGR+AH +KHG FL G E
Sbjct: 138 LDALRDMLADHEV--SSFTLVSVLLACSHLADQGHRLGREAHAFALKHG--FLDKGRER- 192
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVE--RDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
F N+L+ MY + G V+D R+F + D V+WN MI Q G EA+ + M
Sbjct: 193 -FPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDM 251
Query: 484 LLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGC 543
+ G +PD VT L ACS L+ GR+ + + K+ LA + +VD+
Sbjct: 252 VALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQ 311
Query: 544 LDEAKTLIEAMP 555
+ A+ + + +P
Sbjct: 312 VSHARRVFDMVP 323
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 345/669 (51%), Gaps = 76/669 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R VH ++KS +F+ + L D+Y KCG L
Sbjct: 191 RGVHGYVVKSGLHDCVFVASSLADMYGKCGVL---------------------------- 222
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
DDA ++F +PER+ +WN+++ G+ Q+ EA+ M E + + + L
Sbjct: 223 ---DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCL 279
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SA A + G Q HA+ + D +G++ ++ Y K G + A +FD M E+++V
Sbjct: 280 SASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVV 339
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+WN LI+ Y Q G DA+ + M ++ D VTL++++SA A K G ++
Sbjct: 340 TWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYC 399
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS----- 333
+R +D+VL + VDMYA CG + +A+ VFD + ++++ +++S YA++
Sbjct: 400 IR-HSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEA 458
Query: 334 ------------------------------SVKSARLMFTKM----LERNVVSWNALIAG 359
V A+ +F++M + N+VSW ++ G
Sbjct: 459 FRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNG 518
Query: 360 YTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFL 419
QNG +EEA+ R ++ + P ++ L+AC+NLA L GR H +++++
Sbjct: 519 LVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRN----- 573
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
S + + SL+DMY KCG + +F + + D +NAMI A NG EA+ L
Sbjct: 574 QQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIAL 633
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLG 539
+++ G KPD++T +L AC+HAG V + + F+ M +HG+ P +HY MVD+L
Sbjct: 634 CRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILA 693
Query: 540 RAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVL 599
AG D+A LIE MP + DA + SL+A+C + L +++++ LLE EP NSG YV
Sbjct: 694 SAGETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVT 753
Query: 600 LSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLV 659
+SN YA G W EVV+ R++M+ + + K PGCSWI I G V+VF+ DK H NKEI +
Sbjct: 754 ISNAYAVEGSWDEVVKTREMMKAKRLKKSPGCSWIRIKGGVHVFVANDKTHLRNKEIRSI 813
Query: 660 LKMLTREMK 668
L +L +M+
Sbjct: 814 LALLAYDMQ 822
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/594 (27%), Positives = 288/594 (48%), Gaps = 77/594 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+ ++L C+ + + +++HARI+K+ +A +I+ +L+ YAKC + +F K
Sbjct: 71 YGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSK 130
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +NV++W +II + G + EAL F
Sbjct: 131 LRVRNVYSWAAIIGVKCRIGLCE-------------------------------EALMGF 159
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
V+M + + AC + G VH + KS V++ S+L DMYGKC
Sbjct: 160 VEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKC 219
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+VFD + ERN+V+WN+L+ Y QNG +A+ + M GIEP VT+++ +
Sbjct: 220 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCL 279
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
SA A++ +EG Q HA + L D +LG + ++ Y K G + A +FDRM ++V
Sbjct: 280 SASANMDGIEEGKQSHA-IAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDV 338
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V+ WN LI+GY Q G E+A+ + +L++ E
Sbjct: 339 VT-------------------------------WNLLISGYVQQGLVEDAIHMCQLMRLE 367
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
++ T L++A A +L+LG++ + ++H SDI + ++ +DMY C
Sbjct: 368 NLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSF------ASDIVLASTAVDMYANC 421
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
GS+ D ++F++++ +D + WN ++ A++G EA LF +M L P+ +T ++
Sbjct: 422 GSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLII 481
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---M 556
+ G V E ++ FS M + G+ P +T M++ L + GC +EA + M +
Sbjct: 482 LSFLRNGQVNEAKEIFSQM-QSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGL 540
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLS--NMYAELG 608
+P+A L+AC ++ G V ++ + +S + S +MYA+ G
Sbjct: 541 RPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCG 594
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 261/564 (46%), Gaps = 59/564 (10%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
S+ VS ++ EAL +M + +G L C D G Q+HA +
Sbjct: 35 SYFHRVSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARI 94
Query: 178 SKSR--YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
K+ Y+ + Y+ + L+ Y KC + +F +R RN+ SW ++I + G +
Sbjct: 95 LKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEE 154
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
AL FV M+ + I PD + +V AC +L + G +H +++ L + + + ++L
Sbjct: 155 ALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVK-SGLHDCVFVASSLA 213
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
DMY KCG L++AR VFD +P RN VV+WNA
Sbjct: 214 DMYGKCGVLDDARKVFDEIPERN-------------------------------VVAWNA 242
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
L+ GY QNG NEEA+ L +++E + PT T L+A AN+ ++ G+Q+H + +G
Sbjct: 243 LMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNG 302
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
L E D +G S ++ Y K G +E IF+ M+E+D V+WN +I G Q G +
Sbjct: 303 L------ELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVED 356
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
A+ + + M L K D VT+ ++ A + ++ G++ H A + V
Sbjct: 357 AIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKE-VQCYCIRHSFASDIVLASTAV 415
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGE---YVAKKLLEIEPS 592
D+ G + +AK + +++ + D ++W +LL+ + + GE + LE P
Sbjct: 416 DMYANCGSIIDAKKVFDSV-LAKDLILWNTLLSV--YAESGLSGEAFRLFYEMQLESVPP 472
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
N+ + L+ + G+ E + M+ G+ SW ++ + ++
Sbjct: 473 NAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNL-VSWTTMMNGL-------VQNGC 524
Query: 653 NKEIYLVLKMLTREMKRVGYVPNA 676
++E L L R+M+ G PNA
Sbjct: 525 SEEAILFL----RKMQESGLRPNA 544
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 168/359 (46%), Gaps = 43/359 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L+ + R++++ + V I+ FAS+I + + +D+YA CG + A+KVF
Sbjct: 372 DCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVF 431
Query: 78 DKMSNK-----------------------------------NVFTWNSIITGLLKWGFID 102
D + K N TWN II L+ G ++
Sbjct: 432 DSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVN 491
Query: 103 DASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+A +F+ M + SW +M++G Q+ EA+ + KM + +S AL
Sbjct: 492 EAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 551
Query: 159 SACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
SAC+ G VH ++ ++SS V + ++L+DMY KCG ++ A VF ++
Sbjct: 552 SACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDL 611
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+N++I+ Y NG +A+ + R+ +GI+PD +T S++SAC + ++I
Sbjct: 612 PLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTD 671
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
++ ++ L +VD+ A G+ ++A + + MP + S+ M+ + ++K
Sbjct: 672 MVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYK---SDARMIQSLVASCNMK 727
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 321/559 (57%), Gaps = 12/559 (2%)
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++V NS+++ L+ ++ A LF +M RD SWN++++G+A + + +AL F +
Sbjct: 1212 EDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF 1271
Query: 143 HS-ENFALSEYSFGSALSACAGSVDFKMGTQVHA-LLSKSRYSSDVYMGSALIDMYGKCG 200
S E + S L ACA + ++ +H ++ D +G+AL+ Y KC
Sbjct: 1272 ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCN 1331
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
A + F + ++++SWN+++ + ++G + + + M+ GI PD +T+ +++
Sbjct: 1332 YTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQ 1391
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDL--VLGNALVDMYAKCGKLNEARCVFDRMP-IR 317
A+++ K+ + H+ +R L+ D LGN ++D YAKCG + A +F + R
Sbjct: 1392 YYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKR 1451
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
NVV+ SM+SGY +SS A +F M E ++ +WN ++ Y +N ++AL LF L+
Sbjct: 1452 NVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ 1511
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+ + P T ++L ACA++A + + RQ H +V++ +D+ + + IDMY
Sbjct: 1512 GQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-------NDVRLNGAFIDMYS 1564
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGSV ++F + ++D V + AM+ G A +G G EAL +F ML G KPDHV +
Sbjct: 1565 KCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITA 1624
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSHAGLV+EG K F+S+ K HG P + Y C+VDLL R G + +A T + MP++
Sbjct: 1625 VLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIE 1684
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
+A IWG+LL AC+ H + LG VA L +IE N G YV++SN+YA RW V+ +R
Sbjct: 1685 ANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIR 1744
Query: 618 KLMRKRGVVKQPGCSWIEI 636
+LMR R + K GCSWIE+
Sbjct: 1745 RLMRTRELKKPAGCSWIEV 1763
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 237/503 (47%), Gaps = 78/503 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
A LL SC+ ++ +H +K S + L+++YAK G L K+F +M
Sbjct: 974 LAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMD 1033
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++ WN +++GL +GF H+ +E + F
Sbjct: 1034 QRDPVIWNIVLSGL----------------------------AGFQSHE--AEVMRLFRA 1063
Query: 142 MHSENFA-LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
MH N A + + L CA + G VH+ + KS S G+ALI MY KCG
Sbjct: 1064 MHMVNEAKPNSVTIAIVLPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCG 1122
Query: 201 RV-SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
V S A F+ + +++VSWN++I + +N +A ++F M+ I+P+ T+AS++
Sbjct: 1123 LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASIL 1182
Query: 260 SACASL---AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
CASL A ++ G ++H ++R +L D+ + N+L+ Y + ++ +A +F M
Sbjct: 1183 PVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKS 1242
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RL 375
R++VS ++++GYA NGE +AL LF
Sbjct: 1243 RDLVSWNAIIAGYA-------------------------------SNGEWLKALELFSEF 1271
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH-GLRFLSGEESDIFVGNSLID 434
+ E++ P T ++L ACA++ +LQ+ + H ++++H GLR D VGN+L+
Sbjct: 1272 ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLR------EDTSVGNALLS 1325
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
Y KC + + F + +D +SWNA++ ++G T + L ML G +PD +T
Sbjct: 1326 FYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSIT 1385
Query: 495 MIGVL---CACSHAGLVEEGRKY 514
++ ++ A S V+E Y
Sbjct: 1386 ILTIIQYYAAVSRVKKVKETHSY 1408
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C SV R+ H +I++ F +++ + ID+Y+KCG ++GA K+F K+
Sbjct: 1525 ILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKD 1583
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPE 113
+ + +++ G G ++A R+F+ M E
Sbjct: 1584 LVMFTAMVGGFAMHGMGEEALRIFSYMLE 1612
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/506 (39%), Positives = 291/506 (57%), Gaps = 41/506 (8%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+HA L K+ S + + S A+ +F + + WN+ + + +
Sbjct: 33 QLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGD 92
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+DA+ +F R+ I PD T + V+ AC+ L + G +H + + L++++ L
Sbjct: 93 SPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKL-GLQSNMFLQ 151
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
N +V +YA CG++ AR VFD+MP R+V++ M++ K + A +F +M ERNV
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SW ++I GY Q G+++EA+ LF ++ + P T +L ACA++ +L LGR+ H
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
+ SG E +I V N+LIDMY+KCG +ED CRIF+ M ER VSW+AMI G A +G
Sbjct: 272 NR------SGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG 325
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+AL LF KM+ G KP+ VT IG+L ACSH G+VE+GRKYF+SM++++G+ P +HY
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHY 385
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CMVDL RAG L EA I MP+ P+ V+WG+LL CKVH+N+ L E + L +++P
Sbjct: 386 GCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDP 445
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
N G YV+LSN+YAE GRW +V RVRKLMR RG +W ++L
Sbjct: 446 LNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRG-------TWEKLL-------------- 484
Query: 652 LNKEIYLVLKMLTREMKRVGYVPNAS 677
+ MK GYVPN S
Sbjct: 485 -------------QRMKLKGYVPNTS 497
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 169/292 (57%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C R V + + VH + K S +F+QN ++ +YA CG + ARKVFDKM ++
Sbjct: 119 VLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRD 178
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V TWN +I L+K G + A +LFA MPER+ SW SM+ G+AQ + EA+ F++M
Sbjct: 179 VITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMED 238
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+E + + L ACA + +G ++H ++S Y ++ + + LIDMY KCG +
Sbjct: 239 AGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLED 298
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A R+FD M ER +VSW+++I +G A DAL +F +M+ +G++P+ VT ++ AC+
Sbjct: 299 ACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSH 358
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ ++G + A + R + + +VD++++ G L EA MPI
Sbjct: 359 MGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPI 410
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 181/396 (45%), Gaps = 69/396 (17%)
Query: 104 ASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAG 163
A +F + + WN+ + FA+ D ++A+ F ++ + + Y+ L AC+
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWN-- 221
+D + G VH + K S++++ + ++ +Y CG + AR+VFD M +R++++WN
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 222 -----------------------------SLITCYEQNGPASDALEVFVRMMASGIEPDE 252
S+I Y Q G + +A+++F+ M +G+ P+E
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
VT+ +V+ ACA + G +IH R +N + + N L+DMY KCG L +A +FD
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN-IRVCNTLIDMYVKCGCLEDACRIFD 304
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R VVS ++M++G A +G E+AL L
Sbjct: 305 NMEERTVVSWSAMIAGLA-------------------------------AHGRAEDALAL 333
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + V P TF +L+AC+++ ++ GR+ + + G I +
Sbjct: 334 FNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRD-----YGIVPRIEHYGCM 388
Query: 433 IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
+D++ + G +++ M + + V W A++ GC
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/656 (32%), Positives = 352/656 (53%), Gaps = 72/656 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
++ L+ +KS++ R VH +IKS F+ F+ ++LID Y KCG L
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSL----------- 51
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+A +LF +P R +WNSM+S H + EA+ ++
Sbjct: 52 --------------------AEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGN 91
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDMYGKCG 200
M E Y+F + A + + G + H L + D ++ SAL+DMY K
Sbjct: 92 MLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFD 151
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
++ A VF + E+++V + +LI Y Q+G +AL++F M+ G++P+E TLA ++
Sbjct: 152 KMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILI 211
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
C +L G IH LV+ + L + V
Sbjct: 212 NCGNLGDLVNGQLIHG-----------LVVKSGLESV---------------------VA 239
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
S+TS+++ Y++ + ++ + +F ++ N V+W + + G QNG E A+ +FR + R S
Sbjct: 240 SQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS 299
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
+ P +T ++L AC++LA L++G Q H +K GL + + + G +LI++Y KCG
Sbjct: 300 ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGL------DGNKYAGAALINLYGKCG 353
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+++ +F+ + E D V+ N+MI AQNG+G EAL LF+++ G P+ VT I +L
Sbjct: 354 NMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILL 413
Query: 501 ACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDA 560
AC++AGLVEEG + F+S+ H + DH+TCM+DLLGR+ L+EA LIE + PD
Sbjct: 414 ACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDV 472
Query: 561 VIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLM 620
V+W +LL +CK+H + + E V K+LE+ P + G ++LL+N+YA G+W +V+ ++ +
Sbjct: 473 VLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTI 532
Query: 621 RKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R + K P SW+++ V+ FM D HP + EI+ +L L +++K +GY PN
Sbjct: 533 RDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNT 588
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 232/760 (30%), Positives = 376/760 (49%), Gaps = 120/760 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQ--FASEIFIQNRLIDVYAKC------------ 67
+ + L C+ + +S +++HARI+K+ +A +I+ +L+ YAKC
Sbjct: 53 YGEXLQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSK 112
Query: 68 -------------------GCLYGARKVFDKMSNKNVFTWNSIIT------GLLKW---- 98
G GA F +M +F N ++ G L+W
Sbjct: 113 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFG 172
Query: 99 -----------------------------GFIDDASRLFASMPERDQCSWNSMVSGFAQH 129
G +DDA ++F +PER+ +WN+++ G+ Q+
Sbjct: 173 RGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 232
Query: 130 DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMG 189
EA+ F M E + + + LSA A V + G Q HA+ + D +G
Sbjct: 233 GMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILG 292
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE 249
++L++ Y K G + A VFD M ++++V+WN LI+ Y Q G DA+ + M ++
Sbjct: 293 TSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLK 352
Query: 250 PDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
D VTL++++SA A K G ++ +R L D+VL + +DMYAKCG + +A+
Sbjct: 353 YDCVTLSTLMSAAARTENLKFGKEVQCYCIR-HSLDTDIVLASTTMDMYAKCGSIVDAKK 411
Query: 310 VFDRMPIRNVVSETSMVSGYAKAS-----------------------------------S 334
VFD ++++ ++++ YA++
Sbjct: 412 VFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGE 471
Query: 335 VKSARLMFTKM----LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
V A+ MF +M + N++SW ++ G QNG +EEA+ R ++ + P ++
Sbjct: 472 VNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 531
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
L+A ANLA L GR H +++++ LR S + + SL+DMY KCG + R+F
Sbjct: 532 ALSASANLASLHFGRSIHGYIIRN-LR----HSSSVSIETSLVDMYAKCGDINKAERVFG 586
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
+ + + +NAMI A G EA+ L++ + G KPD VT +L AC+HAG +++
Sbjct: 587 SKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQ 646
Query: 511 GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
F++M +HG+ P +HY MVDLL AG ++A LIE MP +PDA + SL+A+C
Sbjct: 647 AVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASC 706
Query: 571 KVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPG 630
L EY+++ LLE EP NSG YV +SN YA G W EVV++R++M+ +G+ K+PG
Sbjct: 707 NKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 766
Query: 631 CSWIEILGH---VNVFMVKDKRHPLNKEIYLVLKMLTREM 667
CSWI+I G V+VF+ D H N I +L +L +M
Sbjct: 767 CSWIQIKGEEEGVHVFVANDXTHIRNDXIQRILALLLYDM 806
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 161/566 (28%), Positives = 273/566 (48%), Gaps = 63/566 (11%)
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
S+ VS ++ EAL +M N + +G L C D G Q+HA +
Sbjct: 17 SYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARI 76
Query: 178 SKSR--YSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASD 235
K+ Y+ + Y+ + L+ Y KC + A +F +R RN+ SW ++I + G
Sbjct: 77 LKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEG 136
Query: 236 ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALV 295
AL FV M+ + I PD + +V AC +L + G +H +++ L + + + ++L
Sbjct: 137 ALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKA-GLEDCVFVASSLA 195
Query: 296 DMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNA 355
DMY KCG L++AR VFD +P RNVV +WNA
Sbjct: 196 DMYGKCGVLDDARKVFDEIPERNVV-------------------------------AWNA 224
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
L+ GY QNG NEEA+ LF +++E V PT T L+A AN+ ++ G+Q+H + +G
Sbjct: 225 LMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNG 284
Query: 416 LRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTE 475
L E D +G SL++ Y K G +E +F+ M ++D V+WN +I G Q G +
Sbjct: 285 L------ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVED 338
Query: 476 ALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMV 535
A+ + + M L K D VT+ ++ A + ++ G++ H L + +
Sbjct: 339 AIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKE-VQCYCIRHSLDTDIVLASTTM 397
Query: 536 DLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSG 595
D+ + G + +AK + ++ ++ D ++W +LLAA ++ + GE + + E++ +
Sbjct: 398 DMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA--YAQSGLSGEAL-RLFYEMQLESVP 453
Query: 596 PYVLLSNMYA-ELGRWGEVVRVRKL---MRKRGVVKQPG-CSWIEILGHVNVFMVKDKRH 650
P V+ N+ L R GEV +++ M+ G+ P SW ++ MV++
Sbjct: 454 PNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGI--SPNLISWTTMMNG----MVQNG-- 505
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNA 676
++E L L R+M+ G PNA
Sbjct: 506 -CSEEAILFL----RKMQESGLRPNA 526
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 40/340 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L+ + R++++ + V I+ ++I + + +D+YAKCG + A+KVF
Sbjct: 354 DCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVF 413
Query: 78 DKMSNK-----------------------------------NVFTWNSIITGLLKWGFID 102
D K NV TWN II LL+ G ++
Sbjct: 414 DSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVN 473
Query: 103 DASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+A +F M + SW +M++G Q+ EA+ + KM + +S AL
Sbjct: 474 EAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 533
Query: 159 SACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
SA A G +H + ++ R+SS V + ++L+DMY KCG ++ A RVF +
Sbjct: 534 SASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSEL 593
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
+N++I+ Y G +A+ ++ + GI+PD VT S++SAC + + +
Sbjct: 594 PLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTA 653
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ + L +VD+ A G+ +A + + MP +
Sbjct: 654 MVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYK 693
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/502 (38%), Positives = 315/502 (62%), Gaps = 8/502 (1%)
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+HA L ++ +S D +M L+ KC + A R+F N+ + +LI + +G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+A++++ RM+ I PD +AS++ AC S A +EG ++H+R ++ N LV
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 187
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++++Y KCG+L +AR VF+ MP +VV+ T M+S Y+ V+ A +F+++ ++ V
Sbjct: 188 -IMELYGKCGELGDARRVFEEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I G+ +N E AL FR ++ E+V P +T +L+AC+ L L++GR H+++
Sbjct: 246 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + E ++FVGN+LI+MY +CGS+++ +F+ M +RD +++N MI G + NG
Sbjct: 306 KFEI------ELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGK 359
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
+A+ LF+ M+ +P +VT +GVL ACSH GLV+ G + F SM++++ + P +HY
Sbjct: 360 SRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYG 419
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR G L+EA LI M M PD ++ G+LL+ACK+H+N+ LGE VAK+L + +
Sbjct: 420 CMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQA 479
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
+SG YVLLS++YA G+W E +VR M++ G+ K+PGCS IE+ ++ F++ D RHP
Sbjct: 480 DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQ 539
Query: 653 NKEIYLVLKMLTREMKRVGYVP 674
+ IY L+ L R ++ GY P
Sbjct: 540 KERIYEKLEELNRLLRLEGYHP 561
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 163/290 (56%), Gaps = 1/290 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ A +L +C ++ + R VH+R +K F+S ++ R++++Y KCG L AR+VF
Sbjct: 146 DNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVF 205
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++V +I+ G +++A +F+ + +D W +M+ GF +++ + AL
Sbjct: 206 EEMP-EDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALE 264
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M EN +E++ LSAC+ ++G VH+ + K ++++G+ALI+MY
Sbjct: 265 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 324
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+CG + A+ VFD M++R+++++N++I+ NG + A+E+F M+ + P VT
Sbjct: 325 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVG 384
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
V++AC+ G +I + R ++ + +VD+ + G+L EA
Sbjct: 385 VLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEA 434
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 213/485 (43%), Gaps = 102/485 (21%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
L LD LL RS+ ++ +HA++I++ + + F+ L+ +KC + A
Sbjct: 44 LKSLDQKQIISLLQ---RSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYA 100
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
++F N NV+ + ++I G + G +
Sbjct: 101 SRIFQYTHNPNVYLYTALIDGFVSSG-------------------------------NYL 129
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ + +M E+ Y S L AC + + G +VH+ K +SS+ + ++
Sbjct: 130 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIM 189
Query: 194 DMYGKCGRVSCARRVFDGM------------------------------RERNIVSWNSL 223
++YGKCG + ARRVF+ M R ++ V W ++
Sbjct: 190 ELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEK 283
I + +N + ALE F M + P+E T+ V+SAC+ L A + G +H+ MR +
Sbjct: 250 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS-YMRKFE 308
Query: 284 LRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT 343
+ +L +GNAL++MY++CG ++EA+ VFD M R+V++ +M+S
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS---------------- 352
Query: 344 KMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
G + NG++ +A+ LFR++ + PT+ TF +LNAC++ +
Sbjct: 353 ---------------GLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDF 397
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNA 462
G + H + R E I ++D+ + G +E+ + TM + D +
Sbjct: 398 GFEIF-HSMARDYRV----EPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGT 452
Query: 463 MIVGC 467
++ C
Sbjct: 453 LLSAC 457
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
LQ R + + H +G D F+ L+ KC +++ RIF+ + +
Sbjct: 56 LQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLY 115
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
A+I G +G EA+ L+ +ML PD+ M +L AC + EGR+ S K
Sbjct: 116 TALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALK 175
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
G + + +++L G+ G L +A+ + E MP
Sbjct: 176 L-GFSSNRLVRLRIMELYGKCGELGDARRVFEEMP 209
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 219/659 (33%), Positives = 340/659 (51%), Gaps = 91/659 (13%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C ++V D ++H +K F ++++ LI +Y++ + AR +F
Sbjct: 85 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 141
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M P RD SWN+M+SG+ Q EAL
Sbjct: 142 DEM-------------------------------PVRDMGSWNAMISGYCQSGNAKEAL- 169
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + A+ + S LSAC + DF G +H+ K S++
Sbjct: 170 ---TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL----------- 215
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ ++VFD M R+++SWNS+I YE N A+ +F M S I+PD +TL S
Sbjct: 216 ----LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 271
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S + L + + +R D+ +GNA+V MYAK G
Sbjct: 272 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-------------- 317
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V SAR +F + +V+SWN +I+GY QNG EA+ ++ +++
Sbjct: 318 -----------------VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 360
Query: 378 RE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
E + T+ ++L AC+ L+ G + H ++K+GL D+FV SL DMY
Sbjct: 361 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL------DVFVVTSLADMY 414
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +ED +F + + V WN +I +G+G +A+ LFK+ML G KPDH+T +
Sbjct: 415 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 474
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH+GLV+EG+ F M ++G+ P HY CMVD+ GRAG L+ A I++M +
Sbjct: 475 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 534
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QPDA IWG+LL+AC+VH N+ LG+ ++ L E+EP + G +VLLSNMYA G+W V +
Sbjct: 535 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 594
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R + +G+ K PG S +E+ V VF ++ HP+ +E+Y L L ++K +GYVP+
Sbjct: 595 RSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD 653
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 326 VSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPT 384
VS + S KS F + R+V +WN +I+GY + G + E + F L S + P
Sbjct: 26 VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 85
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ TF ++L AC + D G + H +K G + D++V SLI +Y + +V +
Sbjct: 86 YRTFPSVLKACRTVID---GNKIHCLALKFGFMW------DVYVAASLIHLYSRYKAVGN 136
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M RD SWNAMI G Q+G EAL L + D VT++ +L AC+
Sbjct: 137 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTE 192
Query: 505 AGLVEEGRKYFSSMSKEHGL 524
AG G S S +HGL
Sbjct: 193 AGDFNRGVT-IHSYSIKHGL 211
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 323/571 (56%), Gaps = 44/571 (7%)
Query: 111 MPER-DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS-FGSALSACAGSVDFK 168
+P R + S + +S FA +++ + G + S+ F + + S F L CA +
Sbjct: 25 LPRRSNTSSLSRNISVFASYEQEELSPGRY----SDEFNVVQASDFIEILQLCARNGAVM 80
Query: 169 MGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYE 228
H + DV + + LI+ Y KCG V AR+VFDGM ER++VSWN++I Y
Sbjct: 81 EAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 140
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
+N S+AL++F M G + E T++SV+SAC + E ++H M+ L +L
Sbjct: 141 RNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMK-TSLDLNL 199
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+G AL+D+YAKCG +N+ A +F M ++
Sbjct: 200 YVGTALLDLYAKCGMIND-------------------------------AVQVFESMQDK 228
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+ V+W++++AGY Q+ EEAL L+R +R S+ +T +++ AC+NLA L G+Q H
Sbjct: 229 SSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 288
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
+ K SG S++FV +S +DMY KCGS+ + IF + E++ WN +I G A
Sbjct: 289 AVIRK------SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFA 342
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
++ E + LF+KM G P+ VT +L C H GLVEEGR++F M +GL+P
Sbjct: 343 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 402
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
HY+CMVD+LGRAG L EA LI+++P +P A IWGSLLA+C+V +N+ L E AKKL E
Sbjct: 403 VHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFE 462
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
+EP N+G +VLLSN+YA +W E+ + RKL+R V K G SWI+I V++F V +
Sbjct: 463 LEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGES 522
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPNASDD 679
HP +EI +L L E+++ GY P+ +
Sbjct: 523 SHPRIREICTMLDNLVIELRKFGYKPSVEHE 553
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 203/369 (55%), Gaps = 36/369 (9%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
+ + +S F ++L C R+ +V + + H + ++ + ++ + N LI+ Y+KCG
Sbjct: 57 EFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCG---- 112
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
F++ A ++F M ER SWN+M+ + ++
Sbjct: 113 ---------------------------FVELARQVFDGMLERSLVSWNTMIGLYTRNRME 145
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
SEAL F +M +E F SE++ S LSAC + D ++H L K+ ++Y+G+AL
Sbjct: 146 SEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTAL 205
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D+Y KCG ++ A +VF+ M++++ V+W+S++ Y Q+ +AL ++ R +E ++
Sbjct: 206 LDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQ 265
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
TL+SV+ AC++LAA EG Q+HA ++R +++ + ++ VDMYAKCG L E+ +F
Sbjct: 266 FTLSSVICACSNLAALIEGKQMHA-VIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 324
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGYTQNGENEE 368
+ +N+ +++SG+AK + K ++F KM + N V++++L++ G EE
Sbjct: 325 EVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 384
Query: 369 ALGLFRLLK 377
F+L++
Sbjct: 385 GRRFFKLMR 393
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 149/299 (49%), Gaps = 31/299 (10%)
Query: 23 AKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSN 82
+ +L +C + + +++H +K+ +++ L+D+YAKCG
Sbjct: 168 SSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCG-------------- 213
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
I+DA ++F SM ++ +W+SMV+G+ Q + EAL + +
Sbjct: 214 -----------------MINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRA 256
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ ++++ S + AC+ G Q+HA++ KS + S+V++ S+ +DMY KCG +
Sbjct: 257 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSL 316
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
+ +F ++E+NI WN++I+ + ++ + + +F +M G+ P+EVT +S++S C
Sbjct: 317 RESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 376
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+EG + + L ++V + +VD+ + G L+EA + +P S
Sbjct: 377 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTAS 435
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,474,273,572
Number of Sequences: 23463169
Number of extensions: 415297181
Number of successful extensions: 1150423
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7905
Number of HSP's successfully gapped in prelim test: 3778
Number of HSP's that attempted gapping in prelim test: 898883
Number of HSP's gapped (non-prelim): 71477
length of query: 705
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 555
effective length of database: 8,839,720,017
effective search space: 4906044609435
effective search space used: 4906044609435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)