BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005265
(705 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/670 (69%), Positives = 558/670 (83%), Gaps = 3/670 (0%)
Query: 1 MATQRSVKQIVGDLA-FLDSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQN 58
MAT +S ++ DL+ F DSSPFAKLLDSC++SK S R VHA +IKS F++EIFIQN
Sbjct: 1 MAT-KSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQN 59
Query: 59 RLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCS 118
RLID Y+KCG L R+VFDKM +N++TWNS++TGL K GF+D+A LF SMPERDQC+
Sbjct: 60 RLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WNSMVSGFAQHDR EAL YF MH E F L+EYSF S LSAC+G D G QVH+L++
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
KS + SDVY+GSAL+DMY KCG V+ A+RVFD M +RN+VSWNSLITC+EQNGPA +AL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
VF M+ S +EPDEVTLASV+SACASL+A K G ++H R+++ +KLRND++L NA VDMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
AKC ++ EAR +FD MPIRNV++ETSM+SGYA A+S K+ARLMFTKM ERNVVSWNALIA
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GYTQNGENEEAL LF LLKRESVCPTHY+F N+L ACA+LA+L LG QAH HV+KHG +F
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
SGEE DIFVGNSLIDMY+KCG VE+G +F M+ERD VSWNAMI+G AQNGYG EAL
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
LF++ML GEKPDH+TMIGVL AC HAG VEEGR YFSSM+++ G+APL+DHYTCMVDLL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L+EAK++IE MPMQPD+VIWGSLLAACKVHRNI LG+YVA+KLLE+EPSNSGPYV
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSNMYAELG+W +V+ VRK MRK GV KQPGCSWI+I GH +VFMVKDK HP K+I+
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 659 VLKMLTREMK 668
+L +L EM+
Sbjct: 660 LLDILIAEMR 669
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/687 (38%), Positives = 395/687 (57%), Gaps = 47/687 (6%)
Query: 30 LRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWN 89
LR S+ R VH II F I NRLIDVY K L AR++FD++S +
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 90 SIITGLLKWGFIDDASRLFASMP--ERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENF 147
++++G G I A +F P RD +N+M++GF+ ++ A+ F KM E F
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 148 ALSEYSFGSALSACA-GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR----V 202
++F S L+ A + D K Q HA KS + +AL+ +Y KC +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGP------------------------------ 232
AR+VFD + E++ SW +++T Y +NG
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 233 --ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVL 290
+ALE+ RM++SGIE DE T SV+ ACA+ + G Q+HA ++R E
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHF 322
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N+LV +Y KCGK +EAR +F++MP +++VS +++SGY + + A+L+F +M E+N+
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SW +I+G +NG EE L LF +KRE P Y F + +CA L G+Q H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
++K G +S + GN+LI MY KCG VE+ ++F TM D VSWNA+I Q+
Sbjct: 443 LLKIGF------DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G+G EA+ ++++ML G +PD +T++ VL ACSHAGLV++GRKYF SM + + P DH
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
Y ++DLL R+G +A+++IE++P +P A IW +LL+ C+VH N+ LG A KL +
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRH 650
P + G Y+LLSNM+A G+W EV RVRKLMR RGV K+ CSWIE+ V+ F+V D H
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 651 PLNKEIYLVLKMLTREMKRVGYVPNAS 677
P + +Y+ L+ L +EM+R+GYVP+ S
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ + SC + + ++ HA+++K F S + N LI +YAKCG + AR+VF M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
+ +WN++I L + G +A ++ M ++
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK 512
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/699 (37%), Positives = 406/699 (58%), Gaps = 50/699 (7%)
Query: 22 FAKLLDSC--LRSKSVSDT------RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ LL+ C L KSV+ + + VH R+IKS +++ N L++VY+K G A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
RK+FD+M + F+WN++++ K G +D F +P+RD SW +M+ G+ ++
Sbjct: 69 RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+A+ M E ++++ + L++ A + + G +VH+ + K +V + ++L+
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188
Query: 194 DMYGKCGRVSCARRVFD-------------------------------GMRERNIVSWNS 222
+MY KCG A+ VFD M ER+IV+WNS
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 223 LITCYEQNGPASDALEVFVRMMA-SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
+I+ + Q G AL++F +M+ S + PD TLASV+SACA+L G QIH+ ++
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE--TSMVSGYAKASSVKSAR 339
+ +VL NAL+ MY++CG + AR + ++ +++ E T+++ GY K + A+
Sbjct: 309 GFDISGIVL-NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +R+VV+W A+I GY Q+G EA+ LFR + P YT +L+ ++LA
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWV 458
L G+Q H VK SGE + V N+LI MY K G++ R F+ + ERD V
Sbjct: 428 SLSHGKQIHGSAVK------SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTV 481
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SW +MI+ AQ+G+ EAL LF+ ML+ G +PDH+T +GV AC+HAGLV +GR+YF M
Sbjct: 482 SWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMM 541
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
+ P HY CMVDL GRAG L EA+ IE MP++PD V WGSLL+AC+VH+NI L
Sbjct: 542 KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 579 GEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
G+ A++LL +EP NSG Y L+N+Y+ G+W E ++RK M+ V K+ G SWIE+
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Query: 639 HVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V+VF V+D HP EIY+ +K + E+K++GYVP+ +
Sbjct: 662 KVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 188/367 (51%), Gaps = 7/367 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D A +L +C + + +++H+ I+ + F + N LI +Y++CG + AR++
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 78 DKMSNKN--VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
++ K+ + + +++ G +K G ++ A +F S+ +RD +W +M+ G+ QH + EA
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F M + Y+ + LS + G Q+H KS V + +ALI M
Sbjct: 398 INLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 196 YGKCGRVSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
Y K G ++ A R FD +R ER+ VSW S+I Q+G A +ALE+F M+ G+ PD +T
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
V SAC +G Q + +K+ L +VD++ + G L EA+ ++M
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 315 PIR-NVVSETSMVSGYAKASSVKSARLMFTKML---ERNVVSWNALIAGYTQNGENEEAL 370
PI +VV+ S++S ++ ++ ++L N +++AL Y+ G+ EEA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 371 GLFRLLK 377
+ + +K
Sbjct: 638 KIRKSMK 644
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/653 (38%), Positives = 385/653 (58%), Gaps = 29/653 (4%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
+ S +R+ ++ RV R+ + S N +I Y + G ARK+FD+M +++
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVS----YNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
+WN +I G ++ + A LF MPERD CSWN+M+SG+AQ+ +A F +M +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 146 NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCA 205
N + S+ + LSA + + +L KSR + + + L+ + K ++ A
Sbjct: 187 N----DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
R+ FD M R++VSWN++IT Y Q+G +A ++F DE + V + A +
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----------DESPVQDVFTWTAMV 288
Query: 266 AAFKEGLQIH-ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
+ + + + AR + + + V NA++ Y + ++ A+ +FD MP RNV + +
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M++GYA+ + A+ +F KM +R+ VSW A+IAGY+Q+G + EAL LF ++RE
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+F + L+ CA++ L+LG+Q H +VK G E+ FVGN+L+ MY KCGS+E+
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEE 462
Query: 445 GCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSH 504
+F+ M +D VSWN MI G +++G+G AL F+ M G KPD TM+ VL ACSH
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 505 AGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWG 564
GLV++GR+YF +M++++G+ P HY CMVDLLGRAG L++A L++ MP +PDA IWG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 565 SLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRG 624
+LL A +VH N L E A K+ +EP NSG YVLLSN+YA GRWG+V ++R MR +G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 625 VVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
V K PG SWIEI + F V D+ HP EI+ L+ L MK+ GYV S
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 41/355 (11%)
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKS 337
L++C +D+ N + Y + G+ NEA VF RMP + VS M+SGY + +
Sbjct: 56 LLKCGD--SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL 113
Query: 338 ARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF-GNLLNACA 396
AR +F +M ER++VSWN +I GY +N +A LF ++ VC + G N C
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERD 456
+ A R E++D+ N+L+ Y++ +E+ C +F++
Sbjct: 174 DDARSVFDRMP--------------EKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 457 WVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFS 516
VSWN ++ G + EA F M + D V+ ++ + +G ++E R+ F
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 517 SMSKEHGLAPLKD--HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHR 574
+P++D +T MV + ++EA+ L + MP + + V W ++LA
Sbjct: 275 E-------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG----- 321
Query: 575 NIMLGEY--VAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVV 626
+ GE +AK+L ++ P N + + YA+ G+ E + M KR V
Sbjct: 322 -YVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 13/242 (5%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ S F+ L +C ++ +++H R++K + + F+ N L+ +Y KCG + A +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRF 132
F +M+ K++ +WN++I G + GF + A R F SM D + +++S +
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMG--TQVHALLSKSRYSSDVYMGS 190
+ YF M + + S AC + + G H L+ + D +
Sbjct: 527 DKGRQYFYTMTQDYGVMP----NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 191 ALIDMYGKCGRVSCARRVFD---GMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
L+ G A D M N + L Y +G D ++ VRM G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 248 IE 249
++
Sbjct: 643 VK 644
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 368/655 (56%), Gaps = 51/655 (7%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGAR 74
A + S +A +L SC + ++HA +KS FA++ ++ +D+YAKC + A+
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+FD N N ++N++IT G++Q + +
Sbjct: 337 ILFDNSENLNRQSYNAMIT-------------------------------GYSQEEHGFK 365
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
AL F ++ S E S ACA G Q++ L KS S DV + +A ID
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MYGKC ++ A RVFD MR R+ VSWN++I +EQNG + L +FV M+ S IEPDE T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
S++ AC + G++IH+ +++ N V G +L+DMY+KCG + EA + R
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSV-GCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
R VS T ++ M K L+ VSWN++I+GY ++E+A LF
Sbjct: 544 FQRANVSGT-----------MEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + P +T+ +L+ CANLA LG+Q H V+K L +SD+++ ++L+D
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL------QSDVYICSTLVD 646
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCG + D +FE + RD+V+WNAMI G A +G G EA+ LF++M+L KP+HVT
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
I +L AC+H GL+++G +YF M +++GL P HY+ MVD+LG++G + A LI M
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 555 PMQPDAVIWGSLLAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEV 613
P + D VIW +LL C +HR N+ + E LL ++P +S Y LLSN+YA+ G W +V
Sbjct: 767 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 826
Query: 614 VRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+R+ MR + K+PGCSW+E+ ++VF+V DK HP +EIY L ++ EMK
Sbjct: 827 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 263/535 (49%), Gaps = 42/535 (7%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+ ++ F+ + C + ++ ++ HA +I S F F+ N L+ VY A V
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FDKM ++V +WN +I G K + A+ F MP RD SWNSM+SG+ Q+ +++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
FV M E +F L C+ D +G Q+H ++ + +DV SAL+DMY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
K R + RVF G+ E+N VSW+++I QN S AL+ F M + A
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
SV+ +CA+L+ + G Q+HA ++ + D ++ A +DMYAKC + +A+ +FD
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL-GLFRL 375
N S +M++GY++ A L+F +++ + G +E +L G+FR
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL-------------GFDEISLSGVFR- 390
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
ACA + L G Q + +K L D+ V N+ IDM
Sbjct: 391 ------------------ACALVKGLSEGLQIYGLAIKSSLSL------DVCVANAAIDM 426
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KC ++ + R+F+ M RD VSWNA+I QNG G E L LF ML +PD T
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+L AC+ G + G + SS+ K G+A ++D+ + G ++EA+ +
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 218/473 (46%), Gaps = 85/473 (17%)
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
+ YF ++ ++S +F CA ++G Q HA + S + ++ + L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSW-------------------------------NSL 223
+Y A VFD M R++VSW NS+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 224 ITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMR--C 281
++ Y QNG + ++EVFV M GIE D T A ++ C+ L G+QIH ++R C
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ D+V +AL+DMYAK + E+ VF +P +N V
Sbjct: 212 D---TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV--------------------- 247
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
SW+A+IAG QN AL F+ +++ + + + ++L +CA L++L
Sbjct: 248 ----------SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
+LG Q H H +K S +D V + +DMY KC +++D +F+ + S+N
Sbjct: 298 RLGGQLHAHALK------SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYN 351
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF-----S 516
AMI G +Q +G +AL LF +++ G D +++ GV AC+ + EG + + S
Sbjct: 352 AMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS 411
Query: 517 SMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S+S + +A +D+ G+ L EA + + M + DAV W +++AA
Sbjct: 412 SLSLDVCVA------NAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/671 (35%), Positives = 387/671 (57%), Gaps = 49/671 (7%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA--KCGCLYGARKVFDKMSN 82
L++ C+ S+ ++ H +I++ S+ + ++L + A L ARKVFD++
Sbjct: 36 LIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
N F WN++I R +AS P+ ++S +A D SE+ Y
Sbjct: 93 PNSFAWNTLI-------------RAYASGPD-------PVLSIWAFLDMVSESQCY---- 128
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
++Y+F + A A +G +H + KS SDV++ ++LI Y CG +
Sbjct: 129 ------PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL 182
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
A +VF ++E+++VSWNS+I + Q G ALE+F +M + ++ VT+ V+SAC
Sbjct: 183 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
A + + G Q+ + + ++ +L L NA++DMY KCG + +A+ +FD M ++ V+
Sbjct: 243 AKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK-RESV 381
T+M+ GYA + ++AR + M ++++V+WNALI+ Y QNG+ EAL +F L+ ++++
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
T + L+ACA + L+LGR H+++ KHG+R + V ++LI MY KCG
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM------NFHVTSALIHMYSKCGD 415
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+E +F ++ +RD W+AMI G A +G G EA+ +F KM KP+ VT V CA
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH GLV+E F M +G+ P + HY C+VD+LGR+G L++A IEAMP+ P
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+WG+LL ACK+H N+ L E +LLE+EP N G +VLLSN+YA+LG+W V +RK MR
Sbjct: 536 VWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMR 595
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS---- 677
G+ K+PGCS IEI G ++ F+ D HP+++++Y L + ++K GY P S
Sbjct: 596 VTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQ 655
Query: 678 --DDEAYEEQN 686
++E +EQ+
Sbjct: 656 IIEEEEMKEQS 666
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 218/492 (44%), Gaps = 108/492 (21%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F L+ + S+S + +H +KS S++F+ N LI Y CG L A KVF +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
K+V +WNS+I G ++ G D A LF K
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFK-------------------------------K 222
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M SE+ S + LSACA + + G QV + + ++R + ++ + +A++DMY KCG
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 202 VSCARRVFDGMRE-------------------------------RNIVSWNSLITCYEQN 230
+ A+R+FD M E ++IV+WN+LI+ YEQN
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 231 GPASDALEVFVRM-MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLV 289
G ++AL VF + + ++ +++TL S +SACA + A + G IH+ + + +R +
Sbjct: 343 GKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFH 401
Query: 290 LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
+ +AL+ MY+KCG L ++R VF+ + R+V ++M+ G A A MF KM E N
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 350 V----VSWNALIAGYTQNGENEEALGLF-------------------------------- 373
V V++ + + G +EA LF
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 374 -RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ ++ + P+ +G LL AC A+L L A T R L E + L
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT-------RLLELEPRNDGAHVLL 574
Query: 433 IDMYMKCGSVED 444
++Y K G E+
Sbjct: 575 SNIYAKLGKWEN 586
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L+ L +C + ++ R +H+ I K + + LI +Y+KCG L +R+V
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
F+ + ++VF W+++I GL G ++A +F M E +
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 365/658 (55%), Gaps = 69/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS+ A L+ +C ++ +++HA K FAS I+ L+++YAKC + A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ +NV WN + L+ +G +DD F
Sbjct: 448 LETEVENVVLWNVM---LVAYGLLDDLRNSFR---------------------------- 476
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M E ++Y++ S L C D ++G Q+H+ + K+ + + Y+ S LIDMY
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
K G++ A + +++VSW ++I Y Q AL F +M+ GI DEV L +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
VSACA L A KEG QIHA+ +DL NALV +Y++CGK+ E+
Sbjct: 597 AVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIEESY--------- 646
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
L F + + ++WNAL++G+ Q+G NEEAL +F +
Sbjct: 647 ----------------------LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 684
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
RE + ++TFG+ + A + A+++ G+Q H + K +G +S+ V N+LI MY
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK------TGYDSETEVCNALISMYA 738
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCGS+ D + F + ++ VSWNA+I +++G+G+EAL F +M+ +P+HVT++G
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACSH GLV++G YF SM+ E+GL+P +HY C+VD+L RAG L AK I+ MP++
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PDA++W +LL+AC VH+N+ +GE+ A LLE+EP +S YVLLSN+YA +W R
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
+ M+++GV K+PG SWIE+ ++ F V D+ HPL EI+ + LT+ +GYV +
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 250/550 (45%), Gaps = 79/550 (14%)
Query: 25 LLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNK 83
LL+ CL++ S+ + R++H++I+K S + +L D Y G LYGA KVFD+M
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEM--- 146
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
PER +WN M+ A + E G FV+M
Sbjct: 147 ----------------------------PERTIFTWNKMIKELASRNLIGEVFGLFVRMV 178
Query: 144 SENFALSEYSFGSALSAC-AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
SEN +E +F L AC GSV F + Q+HA + + + LID+Y + G V
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
ARRVFDG+R ++ SW ++I+ +N ++A+ +F M GI P +SV+SAC
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
+ + + G Q+H +++ +D + NALV +Y G L A +F M R+ V
Sbjct: 299 KKIESLEIGEQLHGLVLKL-GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV-- 355
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
++N LI G +Q G E+A+ LF+ + + +
Sbjct: 356 -----------------------------TYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P T +L+ AC+ L G+Q H + K G S+ + +L+++Y KC +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF------ASNNKIEGALLNLYAKCADI 440
Query: 443 EDGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
E F ET VE + V WN M+V + +F++M + P+ T +L
Sbjct: 441 ETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTC--MVDLLGRAGCLDEAKTLIEAMPMQPD 559
C G +E G + S + K + + Y C ++D+ + G LD A ++ + D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-D 555
Query: 560 AVIWGSLLAA 569
V W +++A
Sbjct: 556 VVSWTTMIAG 565
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 234/494 (47%), Gaps = 83/494 (16%)
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
GS+D G ++H+ + K S+ + L D Y G + A +VFD M ER I +WN
Sbjct: 99 GSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNK 156
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC-ASLAAFKEGLQIHARLMRC 281
+I + +FVRM++ + P+E T + V+ AC AF QIHAR++
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY- 215
Query: 282 EKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLM 341
+ LR+ V+ N L+D+Y++ G ++ AR VFD + +++ S
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-------------------- 255
Query: 342 FTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADL 401
W A+I+G ++N EA+ LF + + PT Y F ++L+AC + L
Sbjct: 256 -----------WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 402 QLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWN 461
++G Q H V+K G SD +V N+L+ +Y G++ IF M +RD V++N
Sbjct: 305 EIGEQLHGLVLKLGF------SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKY------- 514
+I G +Q GYG +A+ LFK+M L G +PD T+ ++ ACS G + G++
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 515 -FSSMSKEHGLAPLKDHYTCMVD---------------------LLGRAGCLDEAKT--- 549
F+S +K G L + Y D +L G LD+ +
Sbjct: 419 GFASNNKIEG--ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 550 LIEAMPMQ---PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNMYA 605
+ M ++ P+ + S+L C ++ LGE + ++++ N+ +L +MYA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 606 ELGR----WGEVVR 615
+LG+ W ++R
Sbjct: 537 KLGKLDTAWDILIR 550
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 118/282 (41%), Gaps = 46/282 (16%)
Query: 383 PTHYTFGNLLNACANL-ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
P H T LL C L GR+ H+ ++K GL +S+ + L D Y+ G
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL------DSNGCLSEKLFDFYLFKGD 135
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
+ ++F+ M ER +WN MI A E GLF +M+ P+ T GVL A
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 502 CS------------HAGLVEEG----------------RKYFSSMSKE--HGLAPLKDH- 530
C HA ++ +G R F +++ GL LKDH
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHS 254
Query: 531 -YTCMVDLLGRAGCLDEAKTL---IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKL 586
+ M+ L + C EA L + + + P + S+L+ACK ++ +GE + +
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 587 LEIEPSNSGPYV--LLSNMYAELGRWGEVVRVRKLMRKRGVV 626
L++ S S YV L ++Y LG + M +R V
Sbjct: 315 LKLGFS-SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/661 (36%), Positives = 370/661 (55%), Gaps = 44/661 (6%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PF L +C +S++ + ++H I+K +A ++F+QN L+ YA+CG L ARKVFD+M
Sbjct: 138 PFG--LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEM 195
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
S +NV +W S+I G + F DA LF M ++ + NS+
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV------------------ 237
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+ +SACA D + G +V+A + S + M SAL+DMY KC
Sbjct: 238 ------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A+R+FD N+ N++ + Y + G +AL VF MM SG+ PD +++ S +S
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 261 ACASLAAFKEGLQIHARLMR--CEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRN 318
+C+ L G H ++R E N + NAL+DMY KC + + A +FDRM +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDN---ICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 319 VVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLK 377
VV+ S+V+GY + V +A F M E+N+VSWN +I+G Q EEA+ +F +
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
+E V T ++ +AC +L L L + + ++ K+G++ D+ +G +L+DM+
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL------DVRLGTTLVDMFS 516
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
+CG E IF ++ RD +W A I A G A+ LF M+ G KPD V +G
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
L ACSH GLV++G++ F SM K HG++P HY CMVDLLGRAG L+EA LIE MPM+
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
P+ VIW SLLAAC+V N+ + Y A+K+ + P +G YVLLSN+YA GRW ++ +VR
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 618 KLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M+++G+ K PG S I+I G + F D+ HP I +L +++ +G+VP+ S
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 678 D 678
+
Sbjct: 757 N 757
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 225/453 (49%), Gaps = 46/453 (10%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS++ G+A +EA+ F++M + + +Y+F LSACA S G Q+H L+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K Y+ D+++ ++L+ Y +CG + AR+VFD M ERN+VSW S+I Y + A DA++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 239 VFVRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
+F RM+ + P+ VT+ V+SACA L + G +++A + NDL++ +ALVDM
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDM 280
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y KC ++ A+ +FD N+ +M S Y +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR-------------------------- 314
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G EALG+F L+ V P + + +++C+ L ++ G+ H +V+++G
Sbjct: 315 -----QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF- 368
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
ES + N+LIDMYMKC + RIF+ M + V+WN+++ G +NG A
Sbjct: 369 -----ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
F+ M + + V+ ++ L EE + F SM + G+ +
Sbjct: 424 ETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 538 LGRAGCLDEAKTL---IEAMPMQPDAVIWGSLL 567
G G LD AK + IE +Q D + +L+
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 50/382 (13%)
Query: 229 QNGPASDALEVFVR-MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRND 287
+N D L++F R + G++ D T+ +V+ L +E L + +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGT-RESLSFAKEVFENSESYGT 98
Query: 288 LVLGNALVDMYAKCGKLNEARCVFDRM------------PI------------------- 316
+ N+L+ YA G NEA +F RM P
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 317 --------RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+++ + S+V YA+ + SAR +F +M ERNVVSW ++I GY + ++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 369 ALGL-FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF 427
A+ L FR+++ E V P T +++ACA L DL+ G + + + G+ E +D+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGI-----EVNDLM 273
Query: 428 VGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
V ++L+DMYMKC +++ R+F+ + NAM + G EALG+F M+ G
Sbjct: 274 V-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 488 EKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
+PD ++M+ + +CS + G+ + + +G + ++D+ + D A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTA 391
Query: 548 KTLIEAMPMQPDAVIWGSLLAA 569
+ + M V W S++A
Sbjct: 392 FRIFDRMS-NKTVVTWNSIVAG 412
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/652 (37%), Positives = 361/652 (55%), Gaps = 71/652 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F ++ +C S V +++HA++IK + +S + QN LI +Y + F
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR----------F 216
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++MS DASR+F +P +D SW+S+++GF+Q EAL
Sbjct: 217 NQMS---------------------DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 138 YFVKMHSEN-FALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
+ +M S F +EY FGS+L AC+ + G+Q+H L KS + + G +L DMY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+CG ++ ARRVFD + + SWN +I NG A +A+ VF +M +SG PD ++L
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP- 315
S++ A A +G+QIH+ +++ L DL + N+L+ MY C L C F+
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYIIKWGFLA-DLTVCNSLLTMYTFCSDL---YCCFNLFED 431
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
RN + VSWN ++ Q+ + E L LF+L
Sbjct: 432 FRN----------------------------NADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
+ P H T GNLL C ++ L+LG Q H + +K GL + F+ N LIDM
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGL------APEQFIKNGLIDM 517
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y KCGS+ RIF++M RD VSW+ +IVG AQ+G+G EAL LFK+M G +P+HVT
Sbjct: 518 YAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTF 577
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSH GLVEEG K +++M EHG++P K+H +C+VDLL RAG L+EA+ I+ M
Sbjct: 578 VGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMK 637
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PD V+W +LL+ACK N+ L + A+ +L+I+P NS +VLL +M+A G W
Sbjct: 638 LEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAAL 697
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
+R M+K V K PG SWIEI +++F +D HP +IY VL + +M
Sbjct: 698 LRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 272/549 (49%), Gaps = 75/549 (13%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ L+ +C S+S++ R++H I+ S + + N ++ +Y KCG L AR+V
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV----- 124
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
F MPER+ S+ S+++G++Q+ + +EA+ ++K
Sbjct: 125 --------------------------FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M E+ +++FGS + ACA S D +G Q+HA + K SS + +ALI MY + +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI-EPDEVTLASVVS 260
+S A RVF G+ ++++SW+S+I + Q G +AL M++ G+ P+E S +
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
AC+SL G QIH ++ E L + + G +L DMYA+CG LN AR VFD+
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARCGFLNSARRVFDQ------- 330
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+ER + SWN +IAG NG +EA+ +F ++
Sbjct: 331 -------------------------IERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P + +LL A L G Q H++++K G FL +D+ V NSL+ MY C
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG--FL----ADLTVCNSLLTMYTFC 419
Query: 440 GSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ +FE D VSWN ++ C Q+ E L LFK ML+ +PDH+TM +
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 479
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQP 558
L C ++ G + S + GLAP + ++D+ + G L +A+ + ++M +
Sbjct: 480 LRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR- 537
Query: 559 DAVIWGSLL 567
D V W +L+
Sbjct: 538 DVVSWSTLI 546
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/596 (27%), Positives = 264/596 (44%), Gaps = 97/596 (16%)
Query: 120 NSMVSGFAQHDRFSEALGYF-VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
N ++ + + + EAL F + +F + ++ S + AC+ S G ++H +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
S D + + ++ MYGKCG + AR VFD M ERN+VS+ S+IT Y QNG ++A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
++++M+ + PD+ S++ ACAS + G Q+HA++++ E + L+ NAL+ MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES-SSHLIAQNALIAMY 213
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
+ ++++A VF +P+++++ SW+++IA
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLI-------------------------------SWSSIIA 242
Query: 359 GYTQNGENEEALG-LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
G++Q G EAL L +L P Y FG+ L AC++L G Q H +K L
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL- 301
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ G SL DMY +CG + R+F+ + D SWN +I G A NGY EA+
Sbjct: 302 -----AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M G PD +++ +LCA + + +G + S + K LA L C L
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLT---VCNSLL 413
Query: 538 LGRAGCLDE--AKTLIEAMPMQPDAVIWGSLLAACKVHRNI--MLGEYVAKKLLEIEP-- 591
C D L E D+V W ++L AC H ML + + E EP
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 592 ----------------------------SNSGPYVLLSN----MYAELGRWGEVVRVRKL 619
+ P + N MYA+ G G+ R+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
M R VV SW + +V + +E ++ K EMK G PN
Sbjct: 534 MDNRDVV-----SW-------STLIVGYAQSGFGEEALILFK----EMKSAGIEPN 573
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
R+ R VS + +++ + S++K+ LM N I ++ EAL
Sbjct: 6 RLGARVSVSNSQILATSSVVSTIKTEELM------------NDHINSLCKSNFYREALEA 53
Query: 373 FRLLKRESVCPTHY-TFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
F ++ S T+ +L+ AC++ L GR+ H H++ ++ D + N
Sbjct: 54 FDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKY------DTILNNH 107
Query: 432 LIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPD 491
++ MY KCGS+ D +F+ M ER+ VS+ ++I G +QNG G EA+ L+ KML PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
++ AC+ + V G++ + + K + L ++ + R + +A +
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ-NALIAMYVRFNQMSDASRVF 226
Query: 552 EAMPMQPDAVIWGSLLA 568
+PM+ D + W S++A
Sbjct: 227 YGIPMK-DLISWSSIIA 242
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 250/700 (35%), Positives = 382/700 (54%), Gaps = 79/700 (11%)
Query: 1 MATQRSVKQIVGDLAFLDSSPFAKLL------DSCLRSKSVSDTRRVHARIIKSQFASEI 54
+++ +V Q+ ++ D P A L +S L+S +V R+ HA ++K +I
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG--RQAHALVVKMSSFGDI 153
Query: 55 FIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
++ L+ +Y K G ++D ++FA MPER
Sbjct: 154 YVDTSLVGMYCKAG-------------------------------LVEDGLKVFAYMPER 182
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYF--VKMHSENFALSEYSFGSALSACAGSVDFKMGTQ 172
+ +W++MVSG+A R EA+ F E + S+Y F + LS+ A ++ +G Q
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGP 232
+H + K+ V + +AL+ MY KC ++ A ++FD +RN ++W++++T Y QNG
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 233 ASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ +A+++F RM ++GI+P E T+ V++AC+ + +EG Q+H+ L++ LG
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---------LG- 352
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
F+R ++ + T++V YAKA + AR F + ER+V
Sbjct: 353 ------------------FER----HLFATTALVDMYAKAGCLADARKGFDCLQERDVAL 390
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W +LI+GY QN +NEEAL L+R +K + P T ++L AC++LA L+LG+Q H H +
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
KHG ++ +G++L MY KCGS+EDG +F +D VSWNAMI G + NG
Sbjct: 451 KHGFGL------EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G EAL LF++ML G +PD VT + ++ ACSH G VE G YF+ MS + GL P DHY
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLL RAG L EAK IE+ + +W LL+ACK H LG Y +KL+ +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
S YV LS +Y LGR +V RV K MR GV K+ GCSWIE+ +VF+V D HP+
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 653 NKEIYLVLKMLTREMKRVGYVPNASDDEAYEEQNGSNSTS 692
+E ++ +++R+M G+V EE+ STS
Sbjct: 685 IEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEGTQLSTS 724
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 210/409 (51%), Gaps = 53/409 (12%)
Query: 170 GTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQ 229
G VH + ++ S+ + + L++ Y KCG+++ A +F+ + +++VSWNSLIT Y Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 230 NGPASDA---LEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
NG S + +++F M A I P+ TLA + A +SL + G Q HA +++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF-G 151
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D+ + +LV MY K G + + VF MP RN + ++MVSGYA
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT--------------- 196
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV--CPTHYTFGNLLNACANLADLQLG 404
G EEA+ +F L RE + Y F +L++ A + LG
Sbjct: 197 ----------------RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 405 RQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMI 464
RQ H +K+GL + + N+L+ MY KC S+ + C++F++ +R+ ++W+AM+
Sbjct: 241 RQIHCITIKNGLLGF------VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 465 VGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK---- 520
G +QNG EA+ LF +M G KP T++GVL ACS +EEG++ S + K
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
H A T +VD+ +AGCL +A+ + + + D +W SL++
Sbjct: 355 RHLFAT-----TALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISG 397
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/671 (34%), Positives = 358/671 (53%), Gaps = 69/671 (10%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
+ +H II++ E F+ N ++ YA AR+VFD++ N+F+WN+++ K
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL-GYFVKMHSENFALSEYSFGS 156
G I + F +P+RD +WN ++ G++ A+ Y M + L+ + +
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 157 ALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
L + + +G Q+H + K + S + +GS L+ MY G +S A++VF G+ +RN
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 217 IV------------------------------SWNSLITCYEQNGPASDALEVFVRMMAS 246
V SW ++I QNG A +A+E F M
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++ D+ SV+ AC L A EG QIHA ++R ++ + +G+AL+DMY KC L+
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDHIYVGSALIDMYCKCKCLHY 323
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
A+ VFD +M ++NVVSW A++ GY Q G
Sbjct: 324 AKTVFD-------------------------------RMKQKNVVSWTAMVVGYGQTGRA 352
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
EEA+ +F ++R + P HYT G ++ACAN++ L+ G Q H + GL +
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY------V 406
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V NSL+ +Y KCG ++D R+F M RD VSW AM+ AQ G E + LF KM+
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G KPD VT+ GV+ ACS AGLVE+G++YF M+ E+G+ P HY+CM+DL R+G L+E
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A I MP PDA+ W +LL+AC+ N+ +G++ A+ L+E++P + Y LLS++YA
Sbjct: 527 AMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYAS 586
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
G+W V ++R+ MR++ V K+PG SWI+ G ++ F D+ P +IY L+ L +
Sbjct: 587 KGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNK 646
Query: 667 MKRVGYVPNAS 677
+ GY P+ S
Sbjct: 647 IIDNGYKPDTS 657
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 233/416 (56%), Gaps = 39/416 (9%)
Query: 35 VSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITG 94
VS +++H ++IK F S + + + L+ +YA GC+ A+KVF + ++N +NS++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 95 LLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
LL G I+DA +LF M E+D SW +M+ G AQ+ EA+ F +M + + +Y F
Sbjct: 215 LLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
GS L AC G G Q+HA + ++ + +Y+GSALIDMY KC + A+ VFD M++
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQI 274
+N+VSW +++ Y Q G A +A+++F+ M SGI+PD TL +SACA++++ +EG Q
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 275 HARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASS 334
H + + L + + + N+LV +Y KCG ++++ +F+ M +R+ VS T+MVS YA+
Sbjct: 394 HGKAI-TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 335 VKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLFRLLKRE-SVCPT--HYT 387
+F KM++ + V+ +I+ ++ G E+ F+L+ E + P+ HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 388 ------------------------------FGNLLNACANLADLQLGRQAHTHVVK 413
+ LL+AC N +L++G+ A +++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 186/370 (50%), Gaps = 37/370 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D PF +L +C ++++ +++HA II++ F I++ + LID+Y KC CL+ A+ V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M KNV +W +++ G+ Q R EA+
Sbjct: 328 FDRMKQKNVVSWTAMVV-------------------------------GYGQTGRAEEAV 356
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+ M Y+ G A+SACA + G+Q H S V + ++L+ +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
GKCG + + R+F+ M R+ VSW ++++ Y Q G A + +++F +M+ G++PD VTL
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 257 SVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC+ ++G Q + +LM E + + + ++D++++ G+L EA + MP
Sbjct: 477 GVISACSRAGLVEKG-QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 316 I-RNVVSETSMVSGYAKASSVKSARLMFTKMLE---RNVVSWNALIAGYTQNGENEEALG 371
+ + T+++S +++ + ++E + + L + Y G+ +
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 372 LFRLLKRESV 381
L R ++ ++V
Sbjct: 596 LRRGMREKNV 605
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/680 (33%), Positives = 372/680 (54%), Gaps = 83/680 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
S +A L+DS + +++HAR++ F+ +LI + G + AR+VFD
Sbjct: 22 SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+ +F WN+++ G+++++ F +AL +
Sbjct: 79 LPRPQIFP-------------------------------WNAIIRGYSRNNHFQDALLMY 107
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
M + ++F L AC+G +MG VHA + + + +DV++ + LI +Y KC
Sbjct: 108 SNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC 167
Query: 200 GRVSCARRVFDGMR--ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
R+ AR VF+G+ ER IVSW ++++ Y QNG +ALE+F +M ++PD V L S
Sbjct: 168 RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 258 VVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
V++A L K+G IHA +++ ++ DL++ +L MYAKCG+
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQ------------- 272
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
V +A+++F KM N++ WNA+I+GY +NG EA+ +F +
Sbjct: 273 ------------------VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P + + ++ACA + L+ R + +V + R D+F+ ++LIDM+
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR------DDVFISSALIDMF 368
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGSVE +F+ ++RD V W+AMIVG +G EA+ L++ M G P+ VT +
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
G+L AC+H+G+V EG +F+ M+ +H + P + HY C++DLLGRAG LD+A +I+ MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QP +WG+LL+ACK HR++ LGEY A++L I+PSN+G YV LSN+YA W V V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
R M+++G+ K GCSW+E+ G + F V DK HP +EI ++ + +K G+V N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 607
Query: 677 S------DDEAYEEQNGSNS 690
+DE EE S+S
Sbjct: 608 DASLHDLNDEEAEETLCSHS 627
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 215/454 (47%), Gaps = 68/454 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS F LL +C + R VHA++ + F +++F+QN LI +YAKC L AR VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ + +PER SW ++VS +AQ+ EAL
Sbjct: 178 EGLP-----------------------------LPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + S L+A D K G +HA + K + + +L MY
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG+V+ A+ +FD M+ N++ WN++I+ Y +NG A +A+++F M+ + PD +++ S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA + + ++ ++ + R + R+D+ + +AL+DM+AKCG + AR VFDR R
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
+VV W+A+I GY +G EA+ L+R ++
Sbjct: 388 DVV-------------------------------VWSAMIVGYGLHGRAREAISLYRAME 416
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
R V P TF LL AC + ++ G + H + + +ID+
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYA------CVIDLLG 470
Query: 438 KCGSVEDGCRIFETMVERDWVS-WNAMIVGCAQN 470
+ G ++ + + M + V+ W A++ C ++
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 57/437 (13%)
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+HS++F + S + + K Q+HA L ++ + LI G
Sbjct: 18 IHSDSF------YASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGD 68
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
++ AR+VFD + I WN++I Y +N DAL ++ M + + PD T ++ A
Sbjct: 69 ITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKA 128
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI--RNV 319
C+ L+ + G +HA++ R D+ + N L+ +YAKC +L AR VF+ +P+ R +
Sbjct: 129 CSGLSHLQMGRFVHAQVFRL-GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
VS T++VS YA QNGE EAL +F +++
Sbjct: 188 VSWTAIVSAYA-------------------------------QNGEPMEALEIFSQMRKM 216
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
V P ++LNA L DL+ GR H VVK GL E D+ + SL MY KC
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI----EPDLLI--SLNTMYAKC 270
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G V +F+ M + + WNAMI G A+NGY EA+ +F +M+ +PD +++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPM 556
AC+ G +E+ R SM + G + +D + ++D+ + G ++ A+ L+ +
Sbjct: 331 SACAQVGSLEQAR----SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR-LVFDRTL 385
Query: 557 QPDAVIWGSLLAACKVH 573
D V+W +++ +H
Sbjct: 386 DRDVVVWSAMIVGYGLH 402
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 334/587 (56%), Gaps = 39/587 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS++ LK +D A ++F M ERD SWNS+++G+ + + L FV+M
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ + S + CA S +G VH++ K+ +S + + L+DMY KCG + A+ V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F M +R++VS+ S+I Y + G A +A+++F M GI PD T+ +V++ CA
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
EG ++H ++ L D+ + NAL+DMYAKCG + E
Sbjct: 414 DEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQE---------------------- 450
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES-VCPTHYT 387
A L+F++M ++++SWN +I GY++N EAL LF LL E P T
Sbjct: 451 ---------AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
+L ACA+L+ GR+ H +++++G SD V NSL+DMY KCG++
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYF------SDRHVANSLVDMYAKCGALLLAHM 555
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ + +D VSW MI G +G+G EA+ LF +M G + D ++ + +L ACSH+GL
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG ++F+ M E + P +HY C+VD+L R G L +A IE MP+ PDA IWG+LL
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALL 675
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
C++H ++ L E VA+K+ E+EP N+G YVL++N+YAE +W +V R+RK + +RG+ K
Sbjct: 676 CGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRK 735
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
PGCSWIEI G VN+F+ D +P + I L+ + M GY P
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 82/459 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D + + C S+ +S R VH+ +K+ F+ E N L+D+Y+KCG L A+ V
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F +MS+++V ++ S+I G + G +A +LF M E
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE----------------------- 390
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
E + Y+ + L+ CA G +VH + ++ D+++ +AL+DMY
Sbjct: 391 --------EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTL 255
KCG + A VF MR ++I+SWN++I Y +N A++AL +F ++ PDE T+
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
A V+ ACASL+AF +G +IH +MR +D + N+LVDMYAKCG L A +FD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++VS T M++GY +G +EA+ LF
Sbjct: 562 SKDLVSWTVMIAGYG-------------------------------MHGFGKEAIALFNQ 590
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS---- 431
+++ + +F +LL AC +H+ +V G RF + + + +
Sbjct: 591 MRQAGIEADEISFVSLLYAC-----------SHSGLVDEGWRFFNIMRHECKIEPTVEHY 639
Query: 432 --LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++DM + G + R E M + D W A++ GC
Sbjct: 640 ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 221/491 (45%), Gaps = 84/491 (17%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L CA S K G +V + + + D +GS L MY CG + A RVFD ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
+ WN L+ ++G S ++ +F +MM+SG+E D T + V + +SL + G Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+++ + V GN+LV Y K +++ AR VFD M R+V+S S+++GY
Sbjct: 219 GFILKSGFGERNSV-GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 336 KSARLMFTKML-------------------ERNVVSW--------------------NAL 356
+ +F +ML + ++S N L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 357 IAGYTQNGENEEALGLFRLL-------------------------------KRESVCPTH 385
+ Y++ G+ + A +FR + + E + P
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 386 YTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDG 445
YT +LN CA L G++ H + ++ L F DIFV N+L+DMY KCGS+++
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF------DIFVSNALMDMYAKCGSMQEA 451
Query: 446 CRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCAC 502
+F M +D +SWN +I G ++N Y EAL LF LL EK PD T+ VL AC
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN--LLLEEKRFSPDERTVACVLPAC 509
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
+ ++GR+ + + +G + +VD+ + G L A L + + D V
Sbjct: 510 ASLSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVS 567
Query: 563 WGSLLAACKVH 573
W ++A +H
Sbjct: 568 WTVMIAGYGMH 578
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 10/222 (4%)
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
+R+V N + + ++G E A+ L + + + P T ++L CA+ L+ G+
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGK 114
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
+ + +G D +G+ L MY CG +++ R+F+ + + WN ++
Sbjct: 115 EVDNFIRGNGFVI------DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 466 GCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLA 525
A++G + ++GLFKKM+ G + D T V + S V G + + K G
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS-GFG 227
Query: 526 PLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
+V + +D A+ + + M + D + W S++
Sbjct: 228 ERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSII 268
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 329/580 (56%), Gaps = 43/580 (7%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+D A LF +PE+D ++N++++G+ + ++E++ F+KM S+++F L A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
G DF +G Q+HAL + +S D +G+ ++D Y K RV R +FD M E + VS+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH--ARL 278
N +I+ Y Q +L F M G + A+++S A+L++ + G Q+H A L
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+ + L +GN+LVDMYAKC E A
Sbjct: 380 ATADSI---LHVGNSLVDMYAKCEMFEE-------------------------------A 405
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
L+F + +R VSW ALI+GY Q G + L LF ++ ++ TF +L A A+
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 399 ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWV 458
A L LG+Q H +++ SG ++F G+ L+DMY KCGS++D ++FE M +R+ V
Sbjct: 466 ASLLLGKQLHAFIIR------SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
SWNA+I A NG G A+G F KM+ G +PD V+++GVL ACSH G VE+G +YF +M
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
S +G+ P K HY CM+DLLGR G EA+ L++ MP +PD ++W S+L AC++H+N L
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 579 GEYVAKKLLEIEP-SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
E A+KL +E ++ YV +SN+YA G W +V V+K MR+RG+ K P SW+E+
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
++VF D+ HP EI + LT E++R GY P+ S
Sbjct: 700 HKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 277/537 (51%), Gaps = 44/537 (8%)
Query: 37 DTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL 96
DTRRV ARIIK+ F ++ N +++ + G + ARKV+D+M +KN + N++I+G +
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 97 KWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENFALSEY-SF 154
K G + A LF +MP+R +W ++ +A++ F EA F +M S + L ++ +F
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM--GSALIDMYGKCGRVSCARRVFDGM 212
+ L C +V QVHA K + ++ ++ + L+ Y + R+ A +F+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E++ V++N+LIT YE++G ++++ +F++M SG +P + T + V+ A L F G
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
Q+HA L D +GN ++D Y+K ++ E R +FD MP + VS
Sbjct: 271 QLHA-LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS----------- 318
Query: 333 SSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLL 392
NVV I+ Y+Q + E +L FR ++ ++ F +L
Sbjct: 319 ---------------YNVV-----ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 393 NACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM 452
+ ANL+ LQ+GRQ H + L+ +S + VGNSL+DMY KC E+ IF+++
Sbjct: 359 SIAANLSSLQMGRQLHCQAL------LATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 453 VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGR 512
+R VSW A+I G Q G L LF KM + D T VL A + + G+
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 513 KYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ + + + L + + +VD+ + G + +A + E MP + +AV W +L++A
Sbjct: 473 QLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 527
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 222/526 (42%), Gaps = 123/526 (23%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
+++HA + + F+ + + N+++D Y+K + R +FD+M
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM------------------ 311
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
PE D S+N ++S ++Q D++ +L +F +M F + F + L
Sbjct: 312 -------------PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 159 SACAGSVDFKMGTQVH--ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERN 216
S A +MG Q+H ALL+ + S +++G++L+DMY KC A +F + +R
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATA--DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 217 IVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHA 276
VSW +LI+ Y Q G L++F +M S + D+ T A+V+ A AS A+ G Q+HA
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
++R L N + G+ LVDMYAKCG + +A VF+ MP RN VS +++S +A
Sbjct: 477 FIIRSGNLEN-VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA------ 529
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACA 396
NG+ E A+G F + + P + +L AC+
Sbjct: 530 -------------------------DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 397 NLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM---- 452
+ CG VE G F+ M
Sbjct: 565 H-----------------------------------------CGFVEQGTEYFQAMSPIY 583
Query: 453 -VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC---SHAGLV 508
+ + M+ +NG EA L +M +PD + VL AC + L
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF---EPDEIMWSSVLNACRIHKNQSLA 640
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
E + SM K A Y M ++ AG ++ + + +AM
Sbjct: 641 ERAAEKLFSMEKLRDAAA----YVSMSNIYAAAGEWEKVRDVKKAM 682
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 31/296 (10%)
Query: 21 PFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
PFA +L S+ R++H + + + S + + N L+D+YAKC
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE------------ 400
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
++A +F S+P+R SW +++SG+ Q L F
Sbjct: 401 -------------------MFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
KM N + +F + L A A +G Q+HA + +S +V+ GS L+DMY KCG
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A +VF+ M +RN VSWN+LI+ + NG A+ F +M+ SG++PD V++ V++
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
AC+ ++G + + + ++D+ + G+ EA + D MP
Sbjct: 562 ACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 126/242 (52%), Gaps = 11/242 (4%)
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
S A F + ++ AR+++ D N +V+ + G+++ AR V+D MP +N VS
Sbjct: 25 SPATFLDTRRVDARIIKT-GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC- 382
+M+SG+ K V SAR +F M +R VV+W L+ Y +N +EA LFR + R S C
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 383 -PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIF--VGNSLIDMYMKC 439
P H TF LL C + Q H VK G +++ F V N L+ Y +
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGF------DTNPFLTVSNVLLKSYCEV 197
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
++ C +FE + E+D V++N +I G ++G TE++ LF KM G +P T GVL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 500 CA 501
A
Sbjct: 258 KA 259
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 79/309 (25%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D S FA +L + S+ +++HA II+S +F + L+D+YAKCG + A +VF
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M ++N +WN++I S A + A+G
Sbjct: 511 EEMPDRNAVSWNALI-------------------------------SAHADNGDGEAAIG 539
Query: 138 YFVKMHSENFALSEYSFGSALSACA-------GSVDFKMGTQVHALLSKSRYSSDVYMGS 190
F KM S L+AC+ G+ F+ + ++ + K ++ +
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY------A 593
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++D+ G+ GR + A ++ D M EP
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEM----------------------------------PFEP 619
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
DE+ +SV++AC + +L EKLR D ++ ++YA G+ + R V
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR-DAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 311 FDRMPIRNV 319
M R +
Sbjct: 679 KKAMRERGI 687
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 243/719 (33%), Positives = 368/719 (51%), Gaps = 119/719 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F + +C SV HA + + F S +F+ N L+ +Y++C L
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL------- 178
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DA ++F M D SWNS++ +A+ + AL
Sbjct: 179 ------------------------SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 138 YFVKMHSE-NFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M +E + + L CA +G Q+H S ++++G+ L+DMY
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM------------- 243
KCG + A VF M +++VSWN+++ Y Q G DA+ +F +M
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 244 ----------------------MASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC 281
++SGI+P+EVTL SV+S CAS+ A G +IH ++
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 282 E-KLR-----NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
LR ++ ++ N L+DMYAKC K V
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKK-------------------------------V 423
Query: 336 KSARLMFTKM--LERNVVSWNALIAGYTQNGENEEALGLFRLLKRE--SVCPTHYTFGNL 391
+AR MF + ER+VV+W +I GY+Q+G+ +AL L + E P +T
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L ACA+LA L++G+Q H + +++ +FV N LIDMY KCGS+ D +F+
Sbjct: 484 LVACASLAALRIGKQIHAYALRN-----QQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M+ ++ V+W +++ G +GYG EALG+F +M G K D VT++ VL ACSH+G++++G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 512 RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACK 571
+YF+ M G++P +HY C+VDLLGRAG L+ A LIE MPM+P V+W + L+ C+
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 572 VHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGC 631
+H + LGEY A+K+ E+ ++ G Y LLSN+YA GRW +V R+R LMR +GV K+PGC
Sbjct: 659 IHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGC 718
Query: 632 SWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS------DDEAYEE 684
SW+E + F V DK HP KEIY VL + +K +GYVP DDE ++
Sbjct: 719 SWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 276/524 (52%), Gaps = 19/524 (3%)
Query: 66 KCGCLYGARKVFDKMSNKNVFTWN---SIITGLLKWGFIDDASRLFASMPERDQ--CSWN 120
KC + + + K+ + + T N +I+ + G + A L P D WN
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 121 SMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS 180
S++ + + ++ L F MHS ++ Y+F AC + G HAL +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 181 RYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF 240
+ S+V++G+AL+ MY +C +S AR+VFD M ++VSWNS+I Y + G ALE+F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 241 VRMMAS-GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYA 299
RM G PD +TL +V+ CASL G Q+H + E ++N + +GN LVDMYA
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN-MFVGNCLVDMYA 275
Query: 300 KCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVSWNA 355
KCG ++EA VF M +++VVS +MV+GY++ + A +F KM E +VV+W+A
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 356 LIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHG 415
I+GY Q G EALG+ R + + P T ++L+ CA++ L G++ H + +K+
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 416 LRFL-SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV--ERDWVSWNAMIVGCAQNGY 472
+ +G + V N LIDMY KC V+ +F+++ ERD V+W MI G +Q+G
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 473 GTEALGLFKKMLL--CGEKPDHVTMIGVLCACSHAGLVEEGRKYFS-SMSKEHGLAPLKD 529
+AL L +M C +P+ T+ L AC+ + G++ + ++ + PL
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 530 HYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
C++D+ + G + +A+ + + M M + V W SL+ +H
Sbjct: 516 S-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/661 (34%), Positives = 366/661 (55%), Gaps = 79/661 (11%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+++V+ +I LK G ID A +F ++PE+ +W +M+SG + R +L F +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+ +N Y + LSAC+ + G Q+HA + + D + + LID Y KCGR
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V A ++F+GM +NI+SW +L++ Y+QN +A+E+F M G++PD +S++++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 262 CASLAAFKEGLQIHARLMR-------------------CEKLRN-----------DLVLG 291
CASL A G Q+HA ++ C+ L + D+VL
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 292 NALVDMYAKCG---KLNEARCVFDRMPIR------------------------------- 317
NA+++ Y++ G +L+EA +F M R
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 318 --------NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEA 369
++ + ++++ Y+ +K +RL+F +M +++V WN++ AGY Q ENEEA
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 370 LGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
L LF L+ P +TF N++ A NLA +QLG++ H ++K GL E + ++
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL------ECNPYIT 593
Query: 430 NSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEK 489
N+L+DMY KCGS ED + F++ RD V WN++I A +G G +AL + +KM+ G +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 490 PDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKT 549
P+++T +GVL ACSHAGLVE+G K F M + G+ P +HY CMV LLGRAG L++A+
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 550 LIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGR 609
LIE MP +P A++W SLL+ C N+ L E+ A+ + +P +SG + +LSN+YA G
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 610 WGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKR 669
W E +VR+ M+ GVVK+PG SWI I V++F+ KDK H +IY VL L +++
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRG 832
Query: 670 V 670
V
Sbjct: 833 V 833
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 274/560 (48%), Gaps = 74/560 (13%)
Query: 20 SPFAKLLDSCLRSKSVSDTR------RVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
SP +L S +++ S D R ++ + ++KS F ++++ LID Y K G + A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R VFD + K+ TW ++I+G +K G R
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMG-------------------------------RSY 231
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
+L F ++ +N Y + LSAC+ + G Q+HA + + D + + LI
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEV 253
D Y KCGRV A ++F+GM +NI+SW +L++ Y+QN +A+E+F M G++PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 254 TLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDR 313
+S++++CASL A G Q+HA ++ L ND + N+L+DMYAKC L +AR VFD
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKA-NLGNDSYVTNSLIDMYAKCDCLTDARKVFDI 410
Query: 314 MPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF 373
+VV +M+ GY++ + W E EAL +F
Sbjct: 411 FAAADVVLFNAMIEGYSRLGT-----------------QW-----------ELHEALNIF 442
Query: 374 RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLI 433
R ++ + P+ TF +LL A A+L L L +Q H + K+GL DIF G++LI
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL------DIFAGSALI 496
Query: 434 DMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
D+Y C ++D +F+ M +D V WN+M G Q EAL LF ++ L E+PD
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
T ++ A + V+ G+++ + K GL ++D+ + G ++A ++
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAFDS 615
Query: 554 MPMQPDAVIWGSLLAACKVH 573
+ D V W S++++ H
Sbjct: 616 AASR-DVVCWNSVISSYANH 634
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 276/561 (49%), Gaps = 91/561 (16%)
Query: 22 FAKLL-----DSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
FA+LL D L ++V VH +II + ++ N LI++Y++ G + ARKV
Sbjct: 47 FARLLQLRASDDLLHYQNV-----VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+KM PER+ SW++MVS H + E+L
Sbjct: 102 FEKM-------------------------------PERNLVSWSTMVSACNHHGIYEESL 130
Query: 137 GYFVKM-HSENFALSEYSFGSALSACAGSVDFK---MGTQVHALLSKSRYSSDVYMGSAL 192
F++ + + +EY S + AC+G +D + M Q+ + L KS + DVY+G+ L
Sbjct: 131 VVFLEFWRTRKDSPNEYILSSFIQACSG-LDGRGRWMVFQLQSFLVKSGFDRDVYVGTLL 189
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
ID Y K G + AR VFD + E++ V+W ++I+ + G + +L++F ++M + PD
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
L++V+SAC+ L + G QIHA ++R L D L N L+D Y KCG++ A +F+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
MP +N++S T+++SGY QN ++EA+ L
Sbjct: 309 GMPNKNIISWTTLLSGY-------------------------------KQNALHKEAMEL 337
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F + + + P Y ++L +CA+L L G Q H + +K L +D +V NSL
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL------GNDSYVTNSL 391
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYG---TEALGLFKKMLLCGEK 489
IDMY KC + D ++F+ D V +NAMI G ++ G EAL +F+ M +
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIR 451
Query: 490 PDHVTMIGVLCACSHAGLVEEG-RKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
P +T + +L A A L G K + ++GL + ++D+ CL +++
Sbjct: 452 PSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 549 TLIEAMPMQPDAVIWGSLLAA 569
+ + M ++ D VIW S+ A
Sbjct: 510 LVFDEMKVK-DLVIWNSMFAG 529
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLF-RLLKRESVCP 383
+++ Y++A + AR +F KM ERN+VSW+ +++ +G EE+L +F + P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 384 THYTFGNLLNACANLADLQLGR------QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
Y + + AC+ L GR Q + +VK SG + D++VG LID Y+
Sbjct: 145 NEYILSSFIQACSGLD----GRGRWMVFQLQSFLVK------SGFDRDVYVGTLLIDFYL 194
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
K G+++ +F+ + E+ V+W MI GC + G +L LF +++ PD +
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
VL ACS +E G++ + + + +GL ++D + G + A L MP
Sbjct: 255 VLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-N 312
Query: 558 PDAVIWGSLLAACK---VHRNIM 577
+ + W +LL+ K +H+ M
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAM 335
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V HG + G E D ++ N LI++Y + G + ++FE M ER+ VSW+ M+ C
Sbjct: 61 HYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC 120
Query: 468 AQNGYGTEALGLFKKMLLC-GEKPDHVTMIGVLCACSHAGLVEEGRKY---FSSMSKEHG 523
+G E+L +F + + P+ + + ACS GL GR S + G
Sbjct: 121 NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSG 178
Query: 524 LAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
+D Y T ++D + G +D A+ + +A+P + V W ++++ C
Sbjct: 179 FD--RDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/654 (35%), Positives = 369/654 (56%), Gaps = 38/654 (5%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL + + + + +HA +KS AS ++ N +++Y+KCG L AR F
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE 70
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
NVF++N I+ K I A +LF +P+ D S+N+++SG+A A+ F +
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M F + ++ ++AC VD + Q+H + S + +A + Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 202 VSCARRVFDGMRE-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A VF GM E R+ VSWNS+I Y Q+ + AL ++ M+ G + D TLASV++
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A SL G Q H +L++ +N V G+ L+D Y+KCG +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHV-GSGLIDFYSKCGGCD--------------- 292
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE-NEEALGLFRLLKRE 379
+ + +F ++L ++V WN +I+GY+ N E +EEA+ FR ++R
Sbjct: 293 -------------GMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI 339
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
P +F + +AC+NL+ +Q H +K + + I V N+LI +Y K
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI-----PSNRISVNNALISLYYKS 394
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G+++D +F+ M E + VS+N MI G AQ+G+GTEAL L+++ML G P+ +T + VL
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+H G V+EG++YF++M + + P +HY+CM+DLLGRAG L+EA+ I+AMP +P
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+V W +LL AC+ H+N+ L E A +L+ ++P + PYV+L+NMYA+ +W E+ VRK
Sbjct: 515 SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKS 574
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYV 673
MR + + K+PGCSWIE+ +VF+ +D HP+ +E+ L+ + ++MK+VGYV
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 195/425 (45%), Gaps = 48/425 (11%)
Query: 153 SFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGM 212
+F L D G +HAL KS +S Y+ + +++Y KCGR+S AR F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 213 RERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
E N+ S+N ++ Y ++ A ++F + +PD V+ +++S A +E
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADA---RETF 122
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGK----LNEARCV-----FDRMPIRNVVSET 323
R KL + V G L + A C + + C FD N
Sbjct: 123 AAMVLFKRMRKLGFE-VDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVN----N 177
Query: 324 SMVSGYAKASSVKSARLMFTKMLE-RNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
+ V+ Y+K ++ A +F M E R+ VSWN++I Y Q+ E +AL L++ + +
Sbjct: 178 AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK 237
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
+T ++LNA +L L GRQ H ++K G + VG+ LID Y KCG
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF------HQNSHVGSGLIDFYSKCGGC 291
Query: 443 E---DGCRIFETMVERDWVSWNAMIVGCAQN-GYGTEALGLFKKMLLCGEKPDHVTMIGV 498
+ D ++F+ ++ D V WN MI G + N EA+ F++M G +PD + + V
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 499 LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--------TCMVDLLGRAGCLDEAKTL 550
ACS+ + ++ HGLA +K H ++ L ++G L +A+ +
Sbjct: 352 TSACSNLSSPSQCKQI-------HGLA-IKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 551 IEAMP 555
+ MP
Sbjct: 404 FDRMP 408
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 36/306 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC-GC--LYGA 73
+D A +L++ + R+ H ++IK+ F + + LID Y+KC GC +Y +
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDS 297
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
KVF ++ + ++ W N+M+SG++ ++ S
Sbjct: 298 EKVFQEILSPDLVVW-------------------------------NTMISGYSMNEELS 326
Query: 134 -EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD-VYMGSA 191
EA+ F +M + SF SAC+ Q+H L KS S+ + + +A
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
LI +Y K G + AR VFD M E N VS+N +I Y Q+G ++AL ++ RM+ SGI P+
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
++T +V+SACA EG + + K+ + + ++D+ + GKL EA
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 312 DRMPIR 317
D MP +
Sbjct: 507 DAMPYK 512
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 34/210 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFAS-EIFIQNRLIDVYAKCGCLYGARKV 76
D F + +C S S +++H IKS S I + N LI +Y K G L AR V
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M N ++N M+ G+AQH +EAL
Sbjct: 404 FDRMPELNAVSFN-------------------------------CMIKGYAQHGHGTEAL 432
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDM 195
+ +M A ++ +F + LSACA G + + ++ + + S +ID+
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 196 YGKCGRVSCARRVFDGMRER-NIVSWNSLI 224
G+ G++ A R D M + V+W +L+
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/662 (34%), Positives = 365/662 (55%), Gaps = 52/662 (7%)
Query: 15 AFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLY--G 72
+F+ +P LL+ C K + +++ A++I + + F +RLI A Y
Sbjct: 49 SFVLHNPLLSLLEKC---KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDY 105
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
+ K+ + N N+F SWN + GF++ +
Sbjct: 106 SVKILKGIENPNIF-------------------------------SWNVTIRGFSESENP 134
Query: 133 SEALGYFVKMHSENFALS---EYSFGSALSACAGSVDFKMGTQVHALLS---KSRYSSDV 186
E+ + +M S +++ CA D ++ + H +L K R
Sbjct: 135 KESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA---DLRLSSLGHMILGHVLKLRLELVS 191
Query: 187 YMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS 246
++ +A I M+ CG + AR+VFD R++VSWN LI Y++ G A A+ V+ M +
Sbjct: 192 HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESE 251
Query: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNE 306
G++PD+VT+ +VS+C+ L G + + ++ LR + L NAL+DM++KCG ++E
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFY-EYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 307 ARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
AR +FD + R +VS T+M+SGYA+ + +R +F M E++VV WNA+I G Q
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
++AL LF+ ++ + P T + L+AC+ L L +G H ++ K+ L ++
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL------NV 424
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
+G SL+DMY KCG++ + +F + R+ +++ A+I G A +G + A+ F +M+
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G PD +T IG+L AC H G+++ GR YFS M L P HY+ MVDLLGRAG L+E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAE 606
A L+E+MPM+ DA +WG+LL C++H N+ LGE AKKLLE++PS+SG YVLL MY E
Sbjct: 545 ADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGE 604
Query: 607 LGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTRE 666
W + R R++M +RGV K PGCS IE+ G V F+V+DK P +++IY L L R
Sbjct: 605 ANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRH 664
Query: 667 MK 668
M+
Sbjct: 665 MR 666
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 237/674 (35%), Positives = 357/674 (52%), Gaps = 68/674 (10%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFI-QNRLIDVYAKCGCLYGARKVFDKM 80
+ +LL SC + R+ + ++K F S I I N L+ +Y++ G + AR +FD+M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL---- 136
++N F+WN++I G + G + R F MPERD SWN +VSGFA+ S A
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 137 ---------------GYFVKMHSE---------NFALSEYSFGSALSACAGSVDFKMGTQ 172
GY + ++E NF+ + + L ACA K G Q
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 173 VHALLSKSRYSSDVYMGSALIDMYGK-------------------------------CGR 201
+HA + D M S+L+++Y K CGR
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
V+ +R +FD R ++ WNS+I+ Y N +AL +F M E D TLA+V++A
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINA 327
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
C L + G Q+H + L +D+V+ + L+DMY+KCG EA +F + + +
Sbjct: 328 CIGLGFLETGKQMHCHACKF-GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTIL 386
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SM+ Y + A+ +F ++ ++++SWN++ G++QNG E L F + + +
Sbjct: 387 LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDL 446
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ ++++ACA+++ L+LG Q GL +SD V +SLID+Y KCG
Sbjct: 447 PTDEVSLSSVISACASISSLELGEQVFARATIVGL------DSDQVVSSSLIDLYCKCGF 500
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
VE G R+F+TMV+ D V WN+MI G A NG G EA+ LFKKM + G +P +T + VL A
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
C++ GLVEEGRK F SM +HG P K+H++CMVDLL RAG ++EA L+E MP D
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
+W S+L C + +G+ A+K++E+EP NS YV LS ++A G W VRKLMR
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 622 KRGVVKQPGCSWIE 635
+ V K PG SW +
Sbjct: 681 ENNVTKNPGSSWTD 694
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 234/488 (47%), Gaps = 72/488 (14%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ +L +C +++ +++HA+I+ + + + L++VYAKCG L A +
Sbjct: 186 DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYML 245
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+++ + + +++I+G G ++++ LF R WNSM+SG+ ++ EAL
Sbjct: 246 EQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALV 305
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M +E S + + ++AC G + G Q+H K D+ + S L+DMY
Sbjct: 306 LFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYS 364
Query: 198 K-------------------------------CGRVSCARRVFDGMRERNIVSWNSLITC 226
K CGR+ A+RVF+ + ++++SWNS+
Sbjct: 365 KCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNG 424
Query: 227 YEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRN 286
+ QNG + LE F +M + DEV+L+SV+SACAS+++ + G Q+ AR L +
Sbjct: 425 FSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR-ATIVGLDS 483
Query: 287 DLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKML 346
D V+ ++L+D+Y KCG + R VFD M + V SM+SGYA
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA---------------- 527
Query: 347 ERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQ 406
NG+ EA+ LF+ + + PT TF +L AC ++ GR+
Sbjct: 528 ---------------TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 407 AHTHV-VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMI 464
+ V HG F+ +E + ++D+ + G VE+ + E M + D W++++
Sbjct: 573 LFESMKVDHG--FVPDKEH----FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSIL 626
Query: 465 VGCAQNGY 472
GC NGY
Sbjct: 627 RGCVANGY 634
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 186/370 (50%), Gaps = 11/370 (2%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS A ++++C+ + +++H K +I + + L+D+Y+KCG A K+F
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++ + + NS+I G IDDA R+F + + SWNSM +GF+Q+ E L
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
YF +MH + E S S +SACA ++G QV A + SD + S+LID+Y
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG V RRVFD M + + V WNS+I+ Y NG +A+++F +M +GI P ++T
Sbjct: 497 KCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V++AC +EG ++ + D + +VD+ A+ G + EA + + MP
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFD 616
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLER-------NVVSWNALIAGYTQNGENEEAL 370
+ SM S + + M K E+ N V++ L A + +G+ E +
Sbjct: 617 ---VDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESS- 672
Query: 371 GLFRLLKRES 380
L R L RE+
Sbjct: 673 ALVRKLMREN 682
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 335/588 (56%), Gaps = 39/588 (6%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
NS+++ K G DDAS+LF M D +WN M+SG+ Q E+L +F +M S
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+F S L + + + + Q+H + + S D+++ SALID Y KC VS A+ +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 209 FDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
F ++V + ++I+ Y NG D+LE+F ++ I P+E+TL S++ L A
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
K G ++H +++ + N +G A++DMYAKCG++N A +F+R+
Sbjct: 458 KLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS------------- 503
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+R++VSWN++I Q+ A+ +FR + +C +
Sbjct: 504 ------------------KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
L+ACANL G+ H ++KH L SD++ ++LIDMY KCG+++ +
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSL------ASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-LCGEKPDHVTMIGVLCACSHAGL 507
F+TM E++ VSWN++I C +G ++L LF +M+ G +PD +T + ++ +C H G
Sbjct: 600 FKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGD 659
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
V+EG ++F SM++++G+ P ++HY C+VDL GRAG L EA +++MP PDA +WG+LL
Sbjct: 660 VDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLL 719
Query: 568 AACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVK 627
AC++H+N+ L E + KL++++PSNSG YVL+SN +A W V +VR LM++R V K
Sbjct: 720 GACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQK 779
Query: 628 QPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
PG SWIEI ++F+ D HP + IY +L L E++ GY+P
Sbjct: 780 IPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 248/490 (50%), Gaps = 40/490 (8%)
Query: 84 NVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH 143
N F +S+I L++G ID S+LF + ++D WN M++G+A+ + F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 144 SENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
+ + + +F LS CA + +G Q+H L+ S + + ++L+ MY KCGR
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACA 263
A ++F M + V+WN +I+ Y Q+G ++L F M++SG+ PD +T +S++ + +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
+ QIH +MR + D+ L +AL+D Y KC ++ A+ +F
Sbjct: 352 KFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIF------------ 398
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCP 383
++ +SV +VV + A+I+GY NG ++L +FR L + + P
Sbjct: 399 ------SQCNSV-------------DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 384 THYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVE 443
T ++L L L+LGR+ H ++K G ++ +G ++IDMY KCG +
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGF------DNRCNIGCAVIDMYAKCGRMN 493
Query: 444 DGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS 503
IFE + +RD VSWN+MI CAQ+ + A+ +F++M + G D V++ L AC+
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 504 HAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIW 563
+ G+ M K H LA + ++D+ + G L A + + M + + V W
Sbjct: 554 NLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSW 611
Query: 564 GSLLAACKVH 573
S++AAC H
Sbjct: 612 NSIIAACGNH 621
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 240/553 (43%), Gaps = 73/553 (13%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS--N 82
LL +C + ++VHA +I + + + + R++ +YA CG K+F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 83 KNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKM 142
++ WNSII+ ++ G ++ +AL ++ KM
Sbjct: 101 SSIRPWNSIISSFVRNGLLN-------------------------------QALAFYFKM 129
Query: 143 HSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRV 202
+ +F + AC +FK + +S + ++ S+LI Y + G++
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 203 SCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSAC 262
++FD + +++ V WN ++ Y + G ++ F M I P+ VT V+S C
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC 249
Query: 263 ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSE 322
AS G+Q+H L+ + + + N+L+ MY+KCG+ ++A +F M + V+
Sbjct: 250 ASKLLIDLGVQLHG-LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 323 TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVC 382
M+SG Y Q+G EE+L F + V
Sbjct: 309 NCMISG-------------------------------YVQSGLMEESLTFFYEMISSGVL 337
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
P TF +LL + + +L+ +Q H ++++H + DIF+ ++LID Y KC V
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL------DIFLTSALIDAYFKCRGV 391
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
IF D V + AMI G NG ++L +F+ ++ P+ +T++ +L
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVI 562
++ GR+ + K+ G + ++D+ + G ++ A + E + + D V
Sbjct: 452 GILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVS 509
Query: 563 WGSLLAACKVHRN 575
W S++ C N
Sbjct: 510 WNSMITRCAQSDN 522
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 191/367 (52%), Gaps = 37/367 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ F+ LL S + +++ +++H I++ + +IF+ + LID Y KC + A+ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ ++ +V + ++I+G L G D+ +F
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR---------------------------- 430
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ VK+ + +E + S L + K+G ++H + K + + +G A+IDMY
Sbjct: 431 WLVKV---KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCGR++ A +F+ + +R+IVSWNS+IT Q+ S A+++F +M SGI D V++++
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+SACA+L + G IH +++ L +D+ + L+DMYAKCG L A VF M +
Sbjct: 548 ALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLER-----NVVSWNALIAGYTQNGENEEALGL 372
N+VS S+++ +K + +F +M+E+ + +++ +I+ G+ +E +
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 373 FRLLKRE 379
FR + +
Sbjct: 667 FRSMTED 673
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 133/278 (47%), Gaps = 32/278 (11%)
Query: 39 RRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKW 98
R +H IIK F + I +ID+YAKCG + A ++F+++S
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS----------------- 503
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
+RD SWNSM++ AQ D S A+ F +M S +AL
Sbjct: 504 --------------KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 159 SACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIV 218
SACA G +H + K +SDVY S LIDMY KCG + A VF M+E+NIV
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 219 SWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTLASVVSACASLAAFKEGLQIHAR 277
SWNS+I +G D+L +F M+ SGI PD++T ++S+C + EG++
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 278 LMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+ ++ +VD++ + G+L EA MP
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 73/346 (21%)
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
L+ ++ AC++ ++G Q+HA L+ + D ++ MYA CG ++ +F R+
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLI-VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRL 96
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
+R SS++ WN++I+ + +NG +AL +
Sbjct: 97 DLRR--------------SSIRP---------------WNSIISSFVRNGLLNQALAFYF 127
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS------GEESDIFV 428
+ V P TF L+ AC L + + G+ FLS G + + FV
Sbjct: 128 KMLCFGVSPDVSTFPCLVKACVALKNFK------------GIDFLSDTVSSLGMDCNEFV 175
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
+SLI Y++ G ++ ++F+ ++++D V WN M+ G A+ G + F M +
Sbjct: 176 ASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQI 235
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK------DHYTCMVDLLGRAG 542
P+ VT VL C+ L++ G + HGL + ++ + + G
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQL-------HGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 543 CLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
D+A L M + D V W N M+ YV L+E
Sbjct: 289 RFDDASKLFRMMS-RADTVTW-----------NCMISGYVQSGLME 322
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D + L +C S S + +H +IK AS+++ ++ LID+YAKCG L A VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER-----DQCSWNSMVSGFAQHDRF 132
M KN+ +WNSII G + D+ LF M E+ DQ ++ ++S
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 133 SEALGYFVKMHSENFAL 149
E + +F M +E++ +
Sbjct: 661 DEGVRFFRSM-TEDYGI 676
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
LL AC+N L+ G+Q H ++ + + D + ++ MY CGS D ++F
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSI------SGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 451 TM-VERDWV-SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
+ + R + WN++I +NG +AL + KML G PD T ++ AC A
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKN 153
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL- 567
+G + S G+ + + ++ G +D L + + +Q D VIW +L
Sbjct: 154 FKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLN 212
Query: 568 --AACKVHRNIMLGEYVAKKLLEIEPS 592
A C +++ G + ++ +I P+
Sbjct: 213 GYAKCGALDSVIKG-FSVMRMDQISPN 238
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 348/658 (52%), Gaps = 73/658 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F LL C + + +H ++KS F+ ++F L ++YAKC + ARKVFD+M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM- 196
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
PERD SWN++V+G++Q+ AL
Sbjct: 197 ------------------------------PERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M EN S + S L A + +G ++H +S + S V + +AL+DMY KCG
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR++FDGM ERN+VSWNS+I Y QN +A+ +F +M+ G++P +V++ + A
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
CA L + G IH KL +L L RNV
Sbjct: 347 CADLGDLERGRFIH-------KLSVELGLD-------------------------RNVSV 374
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
S++S Y K V +A MF K+ R +VSWNA+I G+ QNG +AL F ++ +V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVK--HGLRFLSGEESDIFVGNSLIDMYMKC 439
P +T+ +++ A A L+ TH K HG+ S + ++FV +L+DMY KC
Sbjct: 435 KPDTFTYVSVITAIAELSI--------THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ IF+ M ER +WNAMI G +G+G AL LF++M KP+ VT + V+
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
ACSH+GLVE G K F M + + + DHY MVDLLGRAG L+EA I MP++P
Sbjct: 547 SACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA 606
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
++G++L AC++H+N+ E A++L E+ P + G +VLL+N+Y W +V +VR
Sbjct: 607 VNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVS 666
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
M ++G+ K PGCS +EI V+ F HP +K+IY L+ L +K GYVP+ +
Sbjct: 667 MLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTN 724
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 183/353 (51%), Gaps = 39/353 (11%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+ L+ K+ + + + L+ ++ + G V A RVF+ + + V +++++ + +
Sbjct: 55 QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVS 114
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
AL+ FVRM +EP ++ C A + G +IH L++ DL
Sbjct: 115 DLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK-SGFSLDLFAM 173
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
L +MYAKC ++NE AR +F +M ER++V
Sbjct: 174 TGLENMYAKCRQVNE-------------------------------ARKVFDRMPERDLV 202
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
SWN ++AGY+QNG AL + + + E++ P+ T ++L A + L + +G++ H +
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
++ SG +S + + +L+DMY KCGS+E ++F+ M+ER+ VSWN+MI QN
Sbjct: 263 MR------SGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGL 524
EA+ +F+KML G KP V+++G L AC+ G +E GR + +S E GL
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGL 368
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 338/653 (51%), Gaps = 69/653 (10%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+D F LL +C S + + H+ IIK + A +F+ N L+D+YAKCG L AR++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F++M +++ TWN+II + Q + SEA
Sbjct: 486 FERMCDRDNVTWNTII-------------------------------GSYVQDENESEAF 514
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M+ S L AC G QVH L K D++ GS+LIDMY
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KCG + AR+VF + E ++VS N+LI Y QN +A+ +F M+ G+ P E+T A
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFA 633
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++V AC + G Q H ++ + LG +L+ MY + EA +F +
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL-- 691
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
SS KS +V W +++G++QNG EEAL ++ +
Sbjct: 692 ----------------SSPKS------------IVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ + V P TF +L C+ L+ L+ GR H+ L F + D N+LIDMY
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS------LIFHLAHDLDELTSNTLIDMY 777
Query: 437 MKCGSVEDGCRIFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
KCG ++ ++F+ M R + VSWN++I G A+NGY +AL +F M PD +T
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+GVL ACSHAG V +GRK F M ++G+ DH CMVDLLGR G L EA IEA
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
++PDA +W SLL AC++H + + GE A+KL+E+EP NS YVLLSN+YA G W +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK 668
+RK+MR RGV K PG SWI++ ++F DK H +I + L+ L MK
Sbjct: 958 LRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 169/596 (28%), Positives = 284/596 (47%), Gaps = 72/596 (12%)
Query: 20 SPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
+P + + DS + +S + + RI S I RL+++ L+ +RKVFD+
Sbjct: 8 TPSSAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDE 67
Query: 80 MSNKNVFTW--------NSIITGLLKWGFIDDA-SRLFA------------SMPERDQCS 118
M + S+I G+ G + +A L+A E+D +
Sbjct: 68 MPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA 127
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
WNSM+S ++ + + L FV + ++++F LS CA + + G Q+H +
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K + Y G AL+DMY KC R+S ARRVF+ + + N V W L + Y + G +A+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
VF RM G PD + +V++ L K+ ARL+ E D+V N ++ +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKD-----ARLLFGEMSSPDVVAWNVMISGH 302
Query: 299 AKCG----------KLNEARCVFDRMPIRNVVSE-------------------------- 322
K G + ++ R + +V+S
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 362
Query: 323 ---TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
+S+VS Y+K +++A +F + E+N V WNA+I GY NGE+ + + LF +K
Sbjct: 363 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 422
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+TF +LL+ CA DL++G Q H+ ++K L ++FVGN+L+DMY KC
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL------AKNLFVGNALVDMYAKC 476
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++ED +IFE M +RD V+WN +I Q+ +EA LFK+M LCG D + L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
AC+H + +G++ +S + GL + ++D+ + G + +A+ + ++P
Sbjct: 537 KACTHVHGLYQGKQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 8 KQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC 67
K++ D D + F +L C S+ + R +H+ I + N LID+YAKC
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 68 GCLYGARKVFDKMSNK-NVFTWNSIITGLLKWGFIDDASRLFASMPE 113
G + G+ +VFD+M + NV +WNS+I G K G+ +DA ++F SM +
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/650 (35%), Positives = 356/650 (54%), Gaps = 75/650 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + ++ S S+ + +++HA +IK F S++++ N LI +Y K GC + A KVF
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M +++ +WNS+I+G L G D FS +L
Sbjct: 189 EEMPERDIVSWNSMISGYLALG------------------------------DGFS-SLM 217
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS-DVYMGSALIDMY 196
F +M F +S SAL AC+ KMG ++H +SR + DV + ++++DMY
Sbjct: 218 LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMY 277
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM-ASGIEPDEVTL 255
K G VS A R+F+GM +RNIV+WN +I CY +NG +DA F +M +G++PD +T
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+++ A A L EG IH MR L + +VL AL+DMY +CG+L A +FDRM
Sbjct: 338 INLLPASAIL----EGRTIHGYAMRRGFLPH-MVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+NV+S S+ IA Y QNG+N AL LF+
Sbjct: 393 EKNVISWNSI-------------------------------IAAYVQNGKNYSALELFQE 421
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDM 435
L S+ P T ++L A A L GR+ H ++VK S S+ + NSL+ M
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK------SRYWSNTIILNSLVHM 475
Query: 436 YMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
Y CG +ED + F ++ +D VSWN++I+ A +G+G ++ LF +M+ P+ T
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 496 IGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP 555
+L ACS +G+V+EG +YF SM +E+G+ P +HY CM+DL+GR G AK +E MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 556 MQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVR 615
P A IWGSLL A + H++I + E+ A+++ ++E N+G YVLL NMYAE GRW +V R
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 616 VRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
++ LM +G+ + S +E G +VF D+ H +IY VL +++R
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSR 705
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 38/287 (13%)
Query: 307 ARCVF-DRMPIRNVVSE---TSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
AR V DR + V++ T + G+A + ++ A +F +M + + WN +I G+T
Sbjct: 48 ARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTS 107
Query: 363 NGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGE 422
G EA+ + + V +T+ ++ + A ++ L+ G++ H V+K G
Sbjct: 108 CGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF------ 161
Query: 423 ESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKK 482
SD++V NSLI +YMK G D ++FE M ERD VSWN+MI G G G +L LFK+
Sbjct: 162 VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKE 221
Query: 483 MLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--------TCM 534
ML CG KPD + + L ACSH Y M KE ++ T +
Sbjct: 222 MLKCGFKPDRFSTMSALGACSHV--------YSPKMGKEIHCHAVRSRIETGDVMVMTSI 273
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+D+ + G + A+ + M +Q + V W N+M+G Y
Sbjct: 274 LDMYSKYGEVSYAERIFNGM-IQRNIVAW-----------NVMIGCY 308
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/583 (36%), Positives = 340/583 (58%), Gaps = 12/583 (2%)
Query: 99 GFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSAL 158
G + A +LF +PE D WN+M+ G+++ D E + ++ M E ++F L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 159 SAC---AGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
+ G++ G ++H + K S++Y+ +AL+ MY CG + AR VFD +
Sbjct: 142 NGLKRDGGAL--ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
++ SWN +I+ Y + +++E+ V M + + P VTL V+SAC+ + ++H
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
+ C K L L NALV+ YA CG+++ A +F M R+V+S TS+V GY + ++
Sbjct: 260 EYVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
K AR F +M R+ +SW +I GY + G E+L +FR ++ + P +T ++L AC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
A+L L++G T++ K+ ++ +D+ VGN+LIDMY KCG E ++F M +R
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIK------NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D +W AM+VG A NG G EA+ +F +M +PD +T +GVL AC+H+G+V++ RK+F
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
+ M +H + P HY CMVD+LGRAG + EA ++ MPM P++++WG+LL A ++H +
Sbjct: 493 AKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND 552
Query: 576 IMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIE 635
+ E AKK+LE+EP N Y LL N+YA RW ++ VR+ + + K PG S IE
Sbjct: 553 EPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Query: 636 ILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
+ G + F+ DK H ++EIY+ L+ L +E Y+P+ S+
Sbjct: 613 VNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSE 655
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 157/292 (53%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L +C + K +RVH + + + + ++N L++ YA CG + A ++F M ++
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V +W SI+ G ++ G + A F MP RD+ SW M+ G+ + F+E+L F +M S
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
E++ S L+ACA ++G + + K++ +DV +G+ALIDMY KCG
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A++VF M +R+ +W +++ NG +A++VF +M I+PD++T V+SAC
Sbjct: 422 AQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+ + A++ ++ LV +VDM + G + EA + +MP+
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 231/522 (44%), Gaps = 115/522 (22%)
Query: 18 DSSPFAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
DS F LL+ R +++ +++H ++K S +++QN L+ +Y+ CG + AR V
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+ ++VF+WN M+SG+ + + E++
Sbjct: 193 FDRRCKEDVFSWN-------------------------------LMISGYNRMKEYEESI 221
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
V+M + + + LSAC+ D + +VH +S+ + + + +AL++ Y
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG------------PASD--------- 235
CG + A R+F M+ R+++SW S++ Y + G P D
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 236 ----------ALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
+LE+F M ++G+ PDE T+ SV++ACA L + + G I + + K++
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK-NKIK 400
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
ND+V+GNAL+DMY KCG +A+ VF M R+ + T+MV G A
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA--------------- 445
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
NG+ +EA+ +F ++ S+ P T+ +L+AC
Sbjct: 446 ----------------NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC---------- 479
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSL------IDMYMKCGSVEDGCRIFETM-VERDWV 458
H+ +V +F + SD + SL +DM + G V++ I M + + +
Sbjct: 480 -NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 459 SWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
W A++ A + E + + +PD+ + +LC
Sbjct: 539 VWGALL--GASRLHNDEPMAELAAKKILELEPDNGAVYALLC 578
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 337/607 (55%), Gaps = 56/607 (9%)
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
ARK+FD+M ++N+ +WN +++G +K G ID+A ++F MPER+ SW ++V G+ + +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
A F KM +N + S+ L +++ ++ D +++
Sbjct: 127 DVAESLFWKMPEKN----KVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSM 178
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
I K GRV AR +FD M ER++++W +++T Y QN DA ++F M E E
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTE 234
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
V+ S +++G Y + G++ +A +F+
Sbjct: 235 VSWTS------------------------------MLMG------YVQNGRIEDAEELFE 258
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
MP++ V++ +M+SG + + AR +F M ERN SW +I + +NG EAL L
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
F L++++ V PT T ++L+ CA+LA L G+Q H +V+ + D++V + L
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF------DVDVYVASVL 372
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPD 491
+ MY+KCG + IF+ +D + WN++I G A +G G EAL +F +M L G KP+
Sbjct: 373 MTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 492 HVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLI 551
VT + L ACS+AG+VEEG K + SM G+ P+ HY CMVD+LGRAG +EA +I
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 552 EAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWG 611
++M ++PDA +WGSLL AC+ H + + E+ AKKL+EIEP NSG Y+LLSNMYA GRW
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 612 EVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHPLNKEIYLVLKMLTREMKRV 670
+V +RKLM+ R V K PGCSW E+ V+ F HP + I +L L ++
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612
Query: 671 GYVPNAS 677
GY P+ S
Sbjct: 613 GYNPDCS 619
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 1/254 (0%)
Query: 64 YAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMV 123
Y + G + A ++F+ M K V N++I+GL + G I A R+F SM ER+ SW +++
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 124 SGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYS 183
++ EAL F+ M + + + S LS CA G QVHA L + ++
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFD 363
Query: 184 SDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM 243
DVY+ S L+ MY KCG + ++ +FD ++I+ WNS+I+ Y +G +AL+VF M
Sbjct: 364 VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM 423
Query: 244 MASG-IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
SG +P+EVT + +SAC+ +EGL+I+ + ++ +VDM + G
Sbjct: 424 PLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG 483
Query: 303 KLNEARCVFDRMPI 316
+ NEA + D M +
Sbjct: 484 RFNEAMEMIDSMTV 497
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 214/525 (40%), Gaps = 132/525 (25%)
Query: 24 KLLDSCLRSKSVSDTRRVHA------------RIIKSQFASEIFIQNRLIDVYAKCGCLY 71
KL DSC SKS+S + A ++ I N L+ Y K G +
Sbjct: 38 KLFDSC-DSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEID 96
Query: 72 GARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
ARKVFD M +NV +W +++ G + G +D A LF MPE+++ SW M+ GF Q R
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGR 156
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+A + +M + ++ S L G VD + + + S V +
Sbjct: 157 IDDACKLY-EMIPDKDNIARTSMIHGLCK-EGRVD-----EAREIFDEMSERS-VITWTT 208
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM-------- 243
++ YG+ RV AR++FD M E+ VSW S++ Y QNG DA E+F M
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 244 --MASGI-EPDEVTLASVVSACA---SLAAFKEGLQIHAR------------LMRCEKLR 285
M SG+ + E+ A V + A+++ ++IH R LM+ + +R
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 286 N-----------------------------------DLVLGNALVDMYAKCGKLNEARCV 310
D+ + + L+ MY KCG+L +++ +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
FDR P ++++ S++SGYA +G EEAL
Sbjct: 389 FDRFPSKDIIMWNSIISGYA-------------------------------SHGLGEEAL 417
Query: 371 GLF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG 429
+F + S P TF L+AC ++ +V+ GL+ ES V
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSAC-----------SYAGMVEEGLKIYESMESVFGVK 466
Query: 430 N------SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++DM + G + + ++M VE D W +++ C
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 61/329 (18%)
Query: 291 GNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV 350
N + ++ GK++EAR +FD +++ S SMV+GY + AR +F +M +RN+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 351 VSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTH 410
+SWN L++GY +NGE +EA +F L+
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMP--------------------------------- 106
Query: 411 VVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQN 470
E ++ +L+ Y+ G V+ +F M E++ VSW M++G Q+
Sbjct: 107 ------------ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 471 GYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDH 530
G +A L+ +M+ + +MI LC G V+E R+ F MS+ +
Sbjct: 155 GRIDDACKLY-EMIPDKDNIARTSMIHGLCK---EGRVDEAREIFDEMSERSVIT----- 205
Query: 531 YTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIE 590
+T MV G+ +D+A+ + + MP + + V W S+L + I A++L E+
Sbjct: 206 WTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNGRI----EDAEELFEVM 260
Query: 591 PSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
P P + + M + LG+ GE+ + R++
Sbjct: 261 PVK--PVIACNAMISGLGQKGEIAKARRV 287
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/678 (34%), Positives = 366/678 (53%), Gaps = 69/678 (10%)
Query: 42 HARIIKSQFASEIFIQ--NR-------LIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
HAR Q A IF Q NR +I YA+ G + A +VFD+M + ++N++I
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 93 TGLLKWGF-IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMH-------S 144
T ++K + A LF +PE++ S+ +M++GF + RF EA + + +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
N LS Y + +V G V ++S S+++ Y K GR+
Sbjct: 180 SNVLLSGYLRAGKWNE---AVRVFQGMAVKEVVS----------CSSMVHGYCKMGRIVD 226
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACA 263
AR +FD M ERN+++W ++I Y + G D +F+RM G ++ + TLA + AC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF------------ 311
++EG QIH + R L DL LGN+L+ MY+K G + EA+ VF
Sbjct: 287 DFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 312 -------------------DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVS 352
++MP +++VS T M+ G++ + +F M E++ ++
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 353 WNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
W A+I+ + NG EEAL F + ++ VCP YTF ++L+A A+LADL G Q H VV
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
K + +D+ V NSL+ MY KCG+ D +IF + E + VS+N MI G + NG+
Sbjct: 466 KMNIV------NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
G +AL LF + G++P+ VT + +L AC H G V+ G KYF SM + + P DHY
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS 592
CMVDLLGR+G LD+A LI MP +P + +WGSLL+A K H + L E AKKL+E+EP
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 593 NSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPL 652
++ PYV+LS +Y+ +G+ + R+ + + + + K PG SWI + G V+ F+ D+
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN 699
Query: 653 NKEIYLVLKMLTREMKRV 670
+EI LKM+ +EM+ +
Sbjct: 700 LEEIGFTLKMIRKEMELI 717
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 212/456 (46%), Gaps = 54/456 (11%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
+ L + S+ ++ ++ I + + G + A +F M R+IVSW ++I+ Y +NG
Sbjct: 36 KTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENG 95
Query: 232 PASDALEVFVRM----------MASGI------------------EPDEVTLASVVSACA 263
S A +VF M M + + E + V+ A++++
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV 155
Query: 264 SLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSET 323
F E ++A K R D V N L+ Y + GK NEA VF M ++ VVS +
Sbjct: 156 RAGRFDEAEFLYAE--TPVKFR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCS 212
Query: 324 SMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE-SVC 382
SMV GY K + AR +F +M ERNV++W A+I GY + G E+ GLF +++E V
Sbjct: 213 SMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVK 272
Query: 383 PTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSV 442
T + AC + + G Q H V + L F D+F+GNSL+ MY K G +
Sbjct: 273 VNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEF------DLFLGNSLMSMYSKLGYM 326
Query: 443 EDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCAC 502
+ +F M +D VSWN++I G Q +EA LF+KM D V+ ++
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGF 382
Query: 503 SHAGLVEEGRKYFSSMSKEHGLAPLKDH--YTCMVDLLGRAGCLDEAKTLIEAMPMQ--- 557
S G + + + F G+ P KD+ +T M+ G +EA M +
Sbjct: 383 SGKGEISKCVELF-------GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSN 593
P++ + S+L+A +++ G + +++++ N
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 207/501 (41%), Gaps = 133/501 (26%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGA 73
+ F DS LL LR+ ++ R+ + E+ + ++ Y K G + A
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEA----VRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 74 RKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFS 133
R +FD+M+ +NV TW ++I G K GF +D LF M +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD----------------- 270
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
VK++S A+ AC V ++ G+Q+H L+S+ D+++G++L+
Sbjct: 271 ------VKVNSNTLAV-------MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLM 317
Query: 194 DMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRM---------- 243
MY K G + A+ VF M+ ++ VSWNSLIT Q S+A E+F +M
Sbjct: 318 SMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 244 MASGI-----------------EPDEVTLASVV--------------------------- 259
M G E D +T +++
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 260 --------SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
SA ASLA EGLQIH R+++ + NDL + N+LV MY KCG N+A +F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMN-IVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
+ N+VS +M+S GY+ NG ++AL
Sbjct: 497 SCISEPNIVSYNTMIS-------------------------------GYSYNGFGKKALK 525
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +L+ P TF LL+AC ++ + LG + + +K G +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK-YFKSMKSSYNIEPGPDHYA----C 580
Query: 432 LIDMYMKCGSVEDGCRIFETM 452
++D+ + G ++D + TM
Sbjct: 581 MVDLLGRSGLLDDASNLISTM 601
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 351/659 (53%), Gaps = 76/659 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L +C ++V D ++H +K F ++++ LI +Y++ + AR +F
Sbjct: 152 DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D+M P RD SWN+M+SG+ Q EAL
Sbjct: 209 DEM-------------------------------PVRDMGSWNAMISGYCQSGNAKEAL- 236
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
+ + A+ + S LSAC + DF G +H+ K S++++ + LID+Y
Sbjct: 237 ---TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
+ GR+ ++VFD M R+++SWNS+I YE N A+ +F M S I+PD +TL S
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
+ S + L + + +R D+ +GNA+V MYAK G
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL-------------- 399
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
V SAR +F + +V+SWN +I+GY QNG EA+ ++ +++
Sbjct: 400 -----------------VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 378 RE-SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
E + T+ ++L AC+ L+ G + H ++K+GL D+FV SL DMY
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL------DVFVVTSLADMY 496
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCG +ED +F + + V WN +I +G+G +A+ LFK+ML G KPDH+T +
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
+L ACSH+GLV+EG+ F M ++G+ P HY CMVD+ GRAG L+ A I++M +
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
QPDA IWG+LL+AC+VH N+ LG+ ++ L E+EP + G +VLLSNMYA G+W V +
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
R + +G+ K PG S +E+ V VF ++ HP+ +E+Y L L ++K +GYVP+
Sbjct: 677 RSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD 735
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 275/565 (48%), Gaps = 81/565 (14%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
+HAR++ S+ + I +L+++Y G + AR FD + N++V+ WN +I+G + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ R F+ + M S +F S L A
Sbjct: 133 SSEVIRCFS------------------------------LFMLSSGLTPDYRTFPSVLKA 162
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C +D G ++H L K + DVY+ ++LI +Y + V AR +FD M R++ SW
Sbjct: 163 CRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 219
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLM 279
N++I+ Y Q+G A +AL +++G+ D VT+ S++SAC F G+ IH+ +
Sbjct: 220 NAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSAR 339
+ L ++L + N L+D+YA+ G+L + + VFDRM +R+
Sbjct: 275 K-HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRD--------------------- 312
Query: 340 LMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
++SWN++I Y N + A+ LF+ ++ + P T +L + + L
Sbjct: 313 ----------LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
D++ R ++ G FL DI +GN+++ MY K G V+ +F + D +S
Sbjct: 363 DIRACRSVQGFTLRKGW-FL----EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGE-KPDHVTMIGVLCACSHAGLVEEGRKYFSSM 518
WN +I G AQNG+ +EA+ ++ M GE + T + VL ACS AG + +G K +
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 519 SKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIML 578
K +GL T + D+ G+ G L++A +L +P + ++V W +L+A H +
Sbjct: 478 LK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEK 535
Query: 579 GEYVAKKLLE--IEPSNSGPYVLLS 601
+ K++L+ ++P + LLS
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 222/486 (45%), Gaps = 85/486 (17%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS LL +C + + +H+ IK SE+F+ N+LID+YA+ G L +KV
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD+M +++ +WNSII + P R + M Q D
Sbjct: 305 FDRMYVRDLISWNSIIK-----------AYELNEQPLRAISLFQEMRLSRIQPD------ 347
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMGSALIDM 195
L+ S S LS D + V L K + D+ +G+A++ M
Sbjct: 348 -----------CLTLISLASILSQLG---DIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVT 254
Y K G V AR VF+ + +++SWN++I+ Y QNG AS+A+E++ M G I ++ T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
SV+ AC+ A ++G+++H RL++ L D+ + +L DMY KCG+L +A +F ++
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P N V WN LIA + +G E+A+ LF+
Sbjct: 513 PRVN-------------------------------SVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL-- 432
+ E V P H TF LL+AC +H+ +V G ++D + SL
Sbjct: 542 EMLDEGVKPDHITFVTLLSAC-----------SHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 433 ----IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCG 487
+DMY + G +E + ++M ++ D W A++ C +G LG L
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC--RVHGNVDLGKIASEHLFE 648
Query: 488 EKPDHV 493
+P+HV
Sbjct: 649 VEPEHV 654
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 330/570 (57%), Gaps = 43/570 (7%)
Query: 115 DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
D SWNS+++ A+ +EAL F M + + SF A+ AC+ D G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
Y SD+++ SALI MY CG++ AR+VFD + +RNIVSW S+I Y+ NG A
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 235 DALEVFVRMMASGIEPDE------VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
DA+ +F ++ + D+ + L SV+SAC+ + A IH+ +++ +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK-RGFDRGV 218
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+GN L+D YAK G+ V AR +F +++++
Sbjct: 219 SVGNTLLDAYAKGGE-----------------------------GGVAVARKIFDQIVDK 249
Query: 349 NVVSWNALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQA 407
+ VS+N++++ Y Q+G + EA +FR L+K + V T +L A ++ L++G+
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
H V++ GL E D+ VG S+IDMY KCG VE + F+ M ++ SW AMI G
Sbjct: 310 HDQVIRMGL------EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 468 AQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPL 527
+G+ +AL LF M+ G +P+++T + VL ACSHAGL EG ++F++M G+ P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 528 KDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLL 587
+HY CMVDLLGRAG L +A LI+ M M+PD++IW SLLAAC++H+N+ L E +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 588 EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD 647
E++ SN G Y+LLS++YA+ GRW +V RVR +M+ RG+VK PG S +E+ G V+VF++ D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 648 KRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+ HP ++IY L L R++ GYV N S
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTS 573
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 212/411 (51%), Gaps = 26/411 (6%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S ++ DLA S A L S +R S+ TR S F I + L D+++
Sbjct: 43 SWNSVIADLARSGDSAEALLAFSSMRKLSLYPTR--------SSFPCAIKACSSLFDIFS 94
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
++ F ++F +++I G ++DA ++F +P+R+ SW SM+ G
Sbjct: 95 GKQT---HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 126 FAQHDRFSEALGYF----VKMHSENFALSEYSFG--SALSACAGSVDFKMGTQVHALLSK 179
+ + +A+ F V + ++ A+ S G S +SAC+ + +H+ + K
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 180 SRYSSDVYMGSALIDMYGKCGR--VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
+ V +G+ L+D Y K G V+ AR++FD + +++ VS+NS+++ Y Q+G +++A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 238 EVFVRMMASGIEP-DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVD 296
EVF R++ + + + +TL++V+ A + A + G IH +++R L +D+++G +++D
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIID 330
Query: 297 MYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER----NVVS 352
MY KCG++ AR FDRM +NV S T+M++GY A +F M++ N ++
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 353 WNALIAGYTQNGENEEALGLFRLLK-RESVCPTHYTFGNLLNACANLADLQ 402
+ +++A + G + E F +K R V P +G +++ LQ
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQ 441
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 152/307 (49%), Gaps = 32/307 (10%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC--GCL 70
D FLDS ++ +C R + T +H+ +IK F + + N L+D YAK G +
Sbjct: 177 DAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
ARK+FD++ +K+ ++NSI++ + G ++A +F + + ++N++
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI-------- 288
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
+ + L A + S ++G +H + + DV +G+
Sbjct: 289 ----------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
++IDMY KCGRV AR+ FD M+ +N+ SW ++I Y +G A+ ALE+F M+ SG+ P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
+ +T SV++AC+ EG + + + L +VD+ + G L +A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 311 FDRMPIR 317
RM ++
Sbjct: 447 IQRMKMK 453
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 103/179 (57%), Gaps = 16/179 (8%)
Query: 341 MFTKMLER-NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA 399
+F + +++ +V SWN++IA ++G++ EAL F +++ S+ PT +F + AC++L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 400 DLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVS 459
D+ G+Q H F+ G +SDIFV ++LI MY CG +ED ++F+ + +R+ VS
Sbjct: 91 DIFSGKQTHQQA------FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVS 144
Query: 460 WNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDH------VTMIGVLCACSHA---GLVE 509
W +MI G NG +A+ LFK +L+ D + ++ V+ ACS GL E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 316/524 (60%), Gaps = 39/524 (7%)
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
+ + L C G VHA + +S + D+ MG+ L++MY KCG + AR+VF+ M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 214 ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQ 273
+R+ V+W +LI+ Y Q+ DAL F +M+ G P+E TL+SV+ A A+ G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 274 IHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
+H ++C +++ +G+AL+D+Y + G +++A+
Sbjct: 183 LHGFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQ------------------------- 216
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
L+F + RN VSWNALIAG+ + E+AL LF+ + R+ P+H+++ +L
Sbjct: 217 ------LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC++ L+ G+ H +++K SGE+ F GN+L+DMY K GS+ D +IF+ +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIK------SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
+RD VSWN+++ AQ+G+G EA+ F++M G +P+ ++ + VL ACSH+GL++EG
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 514 YFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
Y+ M K+ G+ P HY +VDLLGRAG L+ A IE MP++P A IW +LL AC++H
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Query: 574 RNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSW 633
+N LG Y A+ + E++P + GP+V+L N+YA GRW + RVRK M++ GV K+P CSW
Sbjct: 444 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 503
Query: 634 IEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
+EI +++F+ D+RHP +EI + + ++K +GYVP+ S
Sbjct: 504 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 206/402 (51%), Gaps = 38/402 (9%)
Query: 6 SVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYA 65
S + G D + LL C K + R VHA I++S F +I + N L+++YA
Sbjct: 47 SSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA 106
Query: 66 KCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSG 125
KCG L ARKV F MP+RD +W +++SG
Sbjct: 107 KCGSLEEARKV-------------------------------FEKMPQRDFVTWTTLISG 135
Query: 126 FAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSD 185
++QHDR +AL +F +M ++ +E++ S + A A G Q+H K + S+
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
V++GSAL+D+Y + G + A+ VFD + RN VSWN+LI + + ALE+F M+
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRC-EKLRNDLVLGNALVDMYAKCGKL 304
G P + AS+ AC+S ++G +HA +++ EKL GN L+DMYAK G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV--AFAGNTLLDMYAKSGSI 313
Query: 305 NEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM----LERNVVSWNALIAGY 360
++AR +FDR+ R+VVS S+++ YA+ K A F +M + N +S+ +++
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ +G +E + L+K++ + P + + +++ DL
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+A L +C + + + VHA +IKS F N L+D+YAK G ++
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH---------- 314
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
DA ++F + +RD SWNS+++ +AQH EA+ +F +
Sbjct: 315 ---------------------DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M +E SF S L+AC+ S G + L+ K + + ++D+ G+ G
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 202 VSCARRVFDGMR-ERNIVSWNSLIT 225
++ A R + M E W +L+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLN 438
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/492 (39%), Positives = 300/492 (60%), Gaps = 43/492 (8%)
Query: 186 VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMA 245
+++ + LI+MY K ++ A ++FD M +RN++SW ++I+ Y + ALE+ V M+
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 246 SGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLN 305
+ P+ T +SV+ +C ++ + +H +++ E L +D+ + +AL+D++AK G+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIK-EGLESDVFVRSALIDVFAKLGEPE 211
Query: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365
+A VFD MV+G + + WN++I G+ QN
Sbjct: 212 DALSVFD-----------EMVTG--------------------DAIVWNSIIGGFAQNSR 240
Query: 366 NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESD 425
++ AL LF+ +KR T ++L AC LA L+LG QAH H+VK+ + D
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--------DQD 292
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+ + N+L+DMY KCGS+ED R+F M ERD ++W+ MI G AQNGY EAL LF++M
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
G KP+++T++GVL ACSHAGL+E+G YF SM K +G+ P+++HY CM+DLLG+AG LD
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYA 605
+A L+ M +PDAV W +LL AC+V RN++L EY AKK++ ++P ++G Y LLSN+YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 606 ELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTR 665
+W V +R MR RG+ K+PGCSWIE+ ++ F++ D HP E+ L L
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIH 532
Query: 666 EMKRVGYVPNAS 677
+ +GYVP +
Sbjct: 533 RLTGIGYVPETN 544
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 195/384 (50%), Gaps = 43/384 (11%)
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
+F N +I +K+ ++DA +LF MP+R+ SW +M+S +++ +AL V M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+N + Y++ S L +C G D +M +H + K SDV++ SALID++ K G
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACAS 264
A VFD M + + WNS+I + QN + ALE+F RM +G ++ TL SV+ AC
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 265 LAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETS 324
LA + G+Q H +++ ++ DL+L NALVDMY KCG L +A VF++M R+V++ ++
Sbjct: 273 LALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
M+SG A QNG ++EAL LF +K P
Sbjct: 330 MISGLA-------------------------------QNGYSQEALKLFERMKSSGTKPN 358
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVED 444
+ T +L AC++ L+ G + K L G + +ID+ K G ++D
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKK-----LYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 445 GCRIFETM-VERDWVSWNAMIVGC 467
++ M E D V+W ++ C
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGAC 437
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 40/298 (13%)
Query: 21 PFAKLLDSCLRS-KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDK 79
P S LRS +SD R +H IIK S++F+++ LIDV+AK G
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG----------- 208
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
+DA +F M D WNS++ GFAQ+ R AL F
Sbjct: 209 --------------------EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
+M F + + S L AC G ++G Q H + K Y D+ + +AL+DMY KC
Sbjct: 249 KRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKC 306
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + A RVF+ M+ER++++W+++I+ QNG + +AL++F RM +SG +P+ +T+ V+
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 260 SACASLAAFKEG---LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
AC+ ++G + +L + +R ++D+ K GKL++A + + M
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVREHY---GCMIDLLGKAGKLDDAVKLLNEM 421
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 330/576 (57%), Gaps = 47/576 (8%)
Query: 106 RLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSV 165
R F+S P +S + R EAL + E + + + + L+AC
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPE---MGFHGYDALLNACLDKR 66
Query: 166 DFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLIT 225
+ G +VHA + K+RY Y+ + L+ YGKC + AR+V D M E+N+VSW ++I+
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 226 CYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLR 285
Y Q G +S+AL VF MM S +P+E T A+V+++C + G QIH +++
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW-NYD 185
Query: 286 NDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKM 345
+ + +G++L+DMYAK A +K AR +F +
Sbjct: 186 SHIFVGSSLLDMYAK-------------------------------AGQIKEAREIFECL 214
Query: 346 LERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGR 405
ER+VVS A+IAGY Q G +EEAL +F L E + P + T+ +LL A + LA L G+
Sbjct: 215 PERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 406 QAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIV 465
QAH HV++ L F + + NSLIDMY KCG++ R+F+ M ER +SWNAM+V
Sbjct: 275 QAHCHVLRRELPFYA------VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 466 GCAQNGYGTEALGLFKKMLLCGEK---PDHVTMIGVLCACSHAGLVEEGRKYFSSM-SKE 521
G +++G G E L LF+ L+ EK PD VT++ VL CSH + + G F M + E
Sbjct: 329 GYSKHGLGREVLELFR--LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGE 386
Query: 522 HGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEY 581
+G P +HY C+VD+LGRAG +DEA I+ MP +P A + GSLL AC+VH ++ +GE
Sbjct: 387 YGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGES 446
Query: 582 VAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVN 641
V ++L+EIEP N+G YV+LSN+YA GRW +V VR +M ++ V K+PG SWI+ ++
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Query: 642 VFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
F D+ HP +E+ +K ++ +MK+ GYVP+ S
Sbjct: 507 YFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 201/377 (53%), Gaps = 64/377 (16%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
+ LL++CL +++ D +RVHA +IK+++ +++ RL+ Y KC CL ARKV D+M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 113
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
PE++ SW +M+S ++Q SEAL F +
Sbjct: 114 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M + +E++F + L++C + +G Q+H L+ K Y S +++GS+L+DMY K G+
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSA 261
+ AR +F+ + ER++VS ++I Y Q G +ALE+F R+ + G+ P+ VT AS+++A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 262 CASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+ LA G Q H ++R E L VL N+L+DMY+KCG L+ AR +FD MP R +S
Sbjct: 264 LSGLALLDHGKQAHCHVLRRE-LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES- 380
WNA++ GY+++G E L LFRL++ E
Sbjct: 323 -------------------------------WNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 381 VCPTHYTFGNLLNACAN 397
V P T +L+ C++
Sbjct: 352 VKPDAVTLLAVLSGCSH 368
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 35/297 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
FA +L SC+R+ + +++H I+K + S IF+ + L+D+YAK G + AR++F+ +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++V + +II +G+AQ EAL F +
Sbjct: 216 ERDVVSCTAII-------------------------------AGYAQLGLDEEALEMFHR 244
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
+HSE + + ++ S L+A +G G Q H + + + ++LIDMY KCG
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 202 VSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM--ASGIEPDEVTLASVV 259
+S ARR+FD M ER +SWN+++ Y ++G + LE+F R+M ++PD VTL +V+
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVL 363
Query: 260 SACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
S C+ GL I ++ E + +VDM + G+++EA RMP
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 339/610 (55%), Gaps = 50/610 (8%)
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
+K + NS+I LK G + A LF + +WNSM+SG+A + EALG F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGR 201
M LSE SF S + CA + + Q+H + K + D + +AL+ Y KC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 202 VSCARRVFDGMR-ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+ A R+F + N+VSW ++I+ + QN +A+++F M G+ P+E T + +++
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A ++ ++HA++++ R+ V G AL+D Y K GK+ E
Sbjct: 406 ALPVISP----SEVHAQVVKTNYERSSTV-GTALLDAYVKLGKVEE-------------- 446
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
A +F+ + ++++V+W+A++AGY Q GE E A+ +F L +
Sbjct: 447 -----------------AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 381 VCPTHYTFGNLLNACANL-ADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
+ P +TF ++LN CA A + G+Q H +K L +S + V ++L+ MY K
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL------DSSLCVSSALLTMYAKK 543
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G++E +F+ E+D VSWN+MI G AQ+G +AL +FK+M K D VT IGV
Sbjct: 544 GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVF 603
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPD 559
AC+HAGLVEEG KYF M ++ +AP K+H +CMVDL RAG L++A +IE MP
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAG 663
Query: 560 AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKL 619
+ IW ++LAAC+VH+ LG A+K++ ++P +S YVLLSNMYAE G W E +VRKL
Sbjct: 664 STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKL 723
Query: 620 MRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNAS-- 677
M +R V K+PG SWIE+ F+ D+ HPL +IY+ L+ L+ +K +GY P+ S
Sbjct: 724 MNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYV 783
Query: 678 ----DDEAYE 683
DDE E
Sbjct: 784 LQDIDDEHKE 793
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 227/475 (47%), Gaps = 59/475 (12%)
Query: 103 DASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
+A LF P RD+ S+ S++ GF++ R EA F+ +H + F S L A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
D G Q+H K + DV +G++L+D Y K R+VFD M+ERN+V+W +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
LI+ Y +N + L +F+RM G +P+ T A+ + A GLQ+H +++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK-N 223
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
L + + N+L+++Y KCG + +AR +FD+ +++VV+ SM+SGYA
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA------------ 271
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
NG + EALG+F ++ V + +F +++ CANL +L+
Sbjct: 272 -------------------ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIF-ETMVERDWVSWN 461
Q H VVK+G F D + +L+ Y KC ++ D R+F E + VSW
Sbjct: 313 FTEQLHCSVVKYGFLF------DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWT 366
Query: 462 AMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACS-------HAGLVEEGRKY 514
AMI G QN EA+ LF +M G +P+ T +L A HA +V+ +
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 426
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
S++ T ++D + G ++EA + + D V W ++LA
Sbjct: 427 SSTVG------------TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 43/375 (11%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
L S FA ++ C K + T ++H ++K F + I+ L+ Y+KC + A ++
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 77 FDKMS-NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
F ++ NV +W ++I+G F Q+D EA
Sbjct: 353 FKEIGCVGNVVSWTAMISG-------------------------------FLQNDGKEEA 381
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F +M + +E+++ L+A + ++VHA + K+ Y +G+AL+D
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDA 437
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y K G+V A +VF G+ +++IV+W++++ Y Q G A+++F + GI+P+E T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 256 ASVVSACASL-AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+S+++ CA+ A+ +G Q H ++ +L + L + +AL+ MYAK G + A VF R
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEAL 370
+++VS SM+SGYA+ A +F +M +R V V++ + A T G EE
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 371 GLFRLLKRE-SVCPT 384
F ++ R+ + PT
Sbjct: 617 KYFDIMVRDCKIAPT 631
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 38/304 (12%)
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
R+ A +FD R+ S+ SL+ + ++G +A +F+ + G+E D +SV+
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVV 320
A+L G Q+H + ++ L +D+ +G +LVD Y
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYM--------------------- 139
Query: 321 SETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRES 380
K S+ K R +F +M ERNVV+W LI+GY +N N+E L LF ++ E
Sbjct: 140 ----------KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440
P +TF L A G Q HT VVK+GL + I V NSLI++Y+KCG
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL------DKTIPVSNSLINLYLKCG 243
Query: 441 SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLC 500
+V +F+ + V+WN+MI G A NG EALG+F M L + + V+
Sbjct: 244 NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIK 303
Query: 501 ACSH 504
C++
Sbjct: 304 LCAN 307
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 32/276 (11%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
VHA+++K+ + + L+D Y K G + A KVF + +K++ W
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW------------ 462
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
++M++G+AQ A+ F ++ +E++F S L+
Sbjct: 463 -------------------SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 161 CAGS-VDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
CA + G Q H KSR S + + SAL+ MY K G + A VF RE+++VS
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLM 279
WNS+I+ Y Q+G A AL+VF M ++ D VT V +AC +EG + ++
Sbjct: 564 WNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 280 RCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
R K+ + +VD+Y++ G+L +A V + MP
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
G +S + +A +F K R+ S+ +L+ G++++G +EA LF + R +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F ++L A L D GRQ H +K G FL D+ VG SL+D YMK + +DG +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFG--FLD----DVSVGTSLVDTYMKGSNFKDGRK 149
Query: 448 IFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGL 507
+F+ M ER+ V+W +I G A+N E L LF +M G +P+ T L + G+
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 508 VEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLL 567
G + + + K +GL +++L + G + +A+ L + ++ V W S++
Sbjct: 210 GGRGLQVHTVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
Query: 568 AA 569
+
Sbjct: 268 SG 269
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 22 FAKLLDSCLRSK-SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKM 80
F+ +L+ C + S+ ++ H IKS+ S + + + L+ +YAK G + A +VF +
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
K++ +WNS+I SG+AQH + +AL F
Sbjct: 557 REKDLVSWNSMI-------------------------------SGYAQHGQAMKALDVFK 585
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDMYGKC 199
+M + +F +AC + + G + ++ + + + S ++D+Y +
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 200 GRVSCARRVFDGM 212
G++ A +V + M
Sbjct: 646 GQLEKAMKVIENM 658
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 348/665 (52%), Gaps = 72/665 (10%)
Query: 14 LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKCGCLYG 72
++ L + LL + + + S+ R VHARI+K+ F+ N LI++Y+K
Sbjct: 1 MSLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPES 60
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRF 132
AR V RL P R+ SW S++SG AQ+ F
Sbjct: 61 ARLVL----------------------------RL---TPARNVVSWTSLISGLAQNGHF 89
Query: 133 SEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
S AL F +M E ++++F A A A G Q+HAL K DV++G +
Sbjct: 90 STALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSA 149
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
DMY K AR++FD + ERN+ +WN+ I+ +G +A+E F+ P+
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
+T + ++AC+ G+Q+H ++R D+ + N L+D Y KC +
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLR-SGFDTDVSVCNGLIDFYGKCKQ--------- 259
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
++S+ ++FT+M +N VSW +L+A Y QN E+E+A L
Sbjct: 260 ----------------------IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
+ +++ V + + ++L+ACA +A L+LGR H H VK + E IFVG++L
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV------ERTIFVGSAL 351
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL--CGEKP 490
+DMY KCG +ED + F+ M E++ V+ N++I G A G AL LF++M CG P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
+++T + +L ACS AG VE G K F SM +G+ P +HY+C+VD+LGRAG ++ A
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEF 471
Query: 551 IEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRW 610
I+ MP+QP +WG+L AC++H LG A+ L +++P +SG +VLLSN +A GRW
Sbjct: 472 IKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRW 531
Query: 611 GEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRV 670
E VR+ ++ G+ K G SWI + V+ F KD+ H LNKEI L L EM+
Sbjct: 532 AEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAA 591
Query: 671 GYVPN 675
GY P+
Sbjct: 592 GYKPD 596
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
RS K IV F+ SS +L +C + R +HA +K+ IF+ + L+D+Y
Sbjct: 300 RSRKDIVETSDFMISS----VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 355
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER 114
KCGC+ + + FD+M KN+ T NS+I G G +D A LF M R
Sbjct: 356 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/650 (34%), Positives = 348/650 (53%), Gaps = 74/650 (11%)
Query: 67 CGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDD-------ASRLFASMPERDQCSW 119
C L R + +M + N ++ L+++ + A +F ++ E + W
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 120 NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSK 179
N+M G A AL +V M S + Y+F L +CA S FK G Q+H + K
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 180 SRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS-------------------- 219
D+Y+ ++LI MY + GR+ A +VFD R++VS
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 220 -----------WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAF 268
WN++I+ Y + G +ALE+F MM + + PDE T+ +VVSACA +
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 269 KEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSG 328
+ G Q+H + ++L + NAL+D+Y+KCG+L A +F+R+P +
Sbjct: 283 ELGRQVHL-WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----------- 330
Query: 329 YAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTF 388
+V+SWN LI GYT +EAL LF+ + R P T
Sbjct: 331 --------------------DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 370
Query: 389 GNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRI 448
++L ACA+L + +GR H ++ K L G + + SLIDMY KCG +E ++
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKR----LKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 449 FETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLV 508
F +++ + SWNAMI G A +G + LF +M G +PD +T +G+L ACSH+G++
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 509 EEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
+ GR F +M++++ + P +HY CM+DLLG +G EA+ +I M M+PD VIW SLL
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQ 628
ACK+H N+ LGE A+ L++IEP N G YVLLSN+YA GRW EV + R L+ +G+ K
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606
Query: 629 PGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNASD 678
PGCS IEI V+ F++ DK HP N+EIY +L+ + +++ G+VP+ S+
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 209/390 (53%), Gaps = 32/390 (8%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
+S F +L SC +SK+ + +++H ++K ++++ LI +Y + G L A KVF
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
DK +++V ++ ++I G G+I++A +LF +P +D SWN+M+SG+A+ + EAL
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F M N E + + +SACA S ++G QVH + + S++ + +ALID+Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG + A +F+ + ++++SWN+LI Y +AL +F M+ SG P++VT+ S
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 258 VVSACASLAAFKEGLQIHARL-MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
++ ACA L A G IH + R + + N L +L+DMYAKCG + A VF+
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN---- 428
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+L +++ SWNA+I G+ +G + + LF +
Sbjct: 429 ---------------------------SILHKSLSSWNAMIFGFAMHGRADASFDLFSRM 461
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQ 406
++ + P TF LL+AC++ L LGR
Sbjct: 462 RKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 271/759 (35%), Positives = 394/759 (51%), Gaps = 124/759 (16%)
Query: 4 QRSVKQIVGDLAFLDSSP----FAKLLDSC--LRSKSVSDTRRVHARIIKSQFASEIFIQ 57
QRS +I + + S P F L+ + L V ++ I KS +++F+
Sbjct: 187 QRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLL--KWGFIDDASRLFASMPERD 115
+ L+ +AK G L ARKVF++M +N T N ++ GL+ KWG ++A++LF M
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG--EEATKLFMDM---- 300
Query: 116 QCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHA 175
NSM+ D E+ Y + + S EYS A V K G +VH
Sbjct: 301 ----NSMI------DVSPES--YVILLSS----FPEYSL-------AEEVGLKKGREVHG 337
Query: 176 -LLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+++ V +G+ L++MY KCG ++ ARRVF M +++ VSWNS+IT +QNG
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI 397
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL--VLGN 292
+A+E + M I P TL S +S+CASL K G QIH + KL DL + N
Sbjct: 398 EAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL---KLGIDLNVSVSN 454
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA----------------SSVK 336
AL+ +YA+ G LNE R +F MP + VS S++ A++ + K
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQK 514
Query: 337 SARLMFTKM--------------------LERNV----VSWNALIAGYTQNGE------- 365
R+ F+ + L+ N+ + NALIA Y + GE
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 366 ----------------------NE---EALGLFRLLKRESVCPTHYTFGNLLNACANLAD 400
NE +AL L + + + + +L+A A++A
Sbjct: 575 FSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+ G + H V+ L ESD+ VG++L+DMY KCG ++ R F TM R+ SW
Sbjct: 635 LERGMEVHACSVRACL------ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEK-PDHVTMIGVLCACSHAGLVEEGRKYFSSMS 519
N+MI G A++G G EAL LF+ M L G+ PDHVT +GVL ACSHAGL+EEG K+F SMS
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 520 KEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC--KVHRNIM 577
+GLAP +H++CM D+LGRAG LD+ + IE MPM+P+ +IW ++L AC R
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
Query: 578 LGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
LG+ A+ L ++EP N+ YVLL NMYA GRW ++V+ RK M+ V K+ G SW+ +
Sbjct: 809 LGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Query: 638 GHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPNA 676
V++F+ DK HP IY LK L R+M+ GYVP
Sbjct: 869 DGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQT 907
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/504 (30%), Positives = 240/504 (47%), Gaps = 48/504 (9%)
Query: 75 KVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSE 134
+++ +K+V+ N++I L+ G A ++F MP R+ SW +VSG++++ E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSAL 192
AL + M E ++Y+F S L AC GSV G Q+H L+ K Y+ D + + L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 193 IDMYGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
I MY KC G V A F + +N VSWNS+I+ Y Q G A +F M G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 252 EVTLASVVSACASLAAFKEGL--QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARC 309
E T S+V+ SL L QI + + L DL +G+ LV +AK G L+ AR
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQK-SGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 310 VFDRMPIRNVVSETSMVSGYAKASSVKSARLMF---TKMLERNVVSWNALIAGYTQNGEN 366
VF++M RN V+ ++ G + + A +F M++ + S+ L++ + +
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLA 324
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGL-RFLSGEESD 425
EE L+ GR+ H HV+ GL F+ G
Sbjct: 325 EE------------------------------VGLKKGREVHGHVITTGLVDFMVG---- 350
Query: 426 IFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL 485
+GN L++MY KCGS+ D R+F M ++D VSWN+MI G QNG EA+ +K M
Sbjct: 351 --IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 486 CGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLD 545
P T+I L +C+ + G++ S + G+ ++ L G L+
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 546 EAKTLIEAMPMQPDAVIWGSLLAA 569
E + + +MP + D V W S++ A
Sbjct: 468 ECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 136/515 (26%), Positives = 225/515 (43%), Gaps = 99/515 (19%)
Query: 174 HALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPA 233
H+ L K+R DVY+ + LI+ Y + G AR+VFD M RN VSW +++ Y +NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 234 SDALEVFVR-MMASGIEPDEVTLASVVSACASLAAFK--EGLQIHARLMRCEKLRNDLVL 290
+AL VF+R M+ GI ++ SV+ AC + + G QIH + + D V+
Sbjct: 84 KEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL-SYAVDAVV 141
Query: 291 GNALVDMYAKC-GKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERN 349
N L+ MY KC G + A C F + ++N VS S++S Y++A +SA +F+ M
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM---- 197
Query: 350 VVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLA--DLQLGRQA 407
+ + PT YTFG+L+ +L D++L Q
Sbjct: 198 ---------------------------QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQI 230
Query: 408 HTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGC 467
+ K GL +D+FVG+ L+ + K GS+ ++F M R+ V+ N ++VG
Sbjct: 231 MCTIQKSGLL------TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 468 AQNGYGTEALGLFKKM------------LLCGEKPD-----------------HVT---- 494
+ +G EA LF M +L P+ HV
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 495 ---MIGV----LCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA 547
M+G+ + + G + + R+ F M+ + ++ + M+ L + GC EA
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS-----WNSMITGLDQNGCFIEA 399
Query: 548 KTLIEAM---PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPS-NSGPYVLLSNM 603
++M + P + S L++C + LG+ + + L++ N L +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 604 YAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILG 638
YAE G E ++ M + V SW I+G
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQV-----SWNSIIG 489
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 336/573 (58%), Gaps = 8/573 (1%)
Query: 104 ASRLFASMPER-DQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACA 162
A +F+S+P + +N + ++ + ++ ++ L ++SF L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 163 GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNS 222
G ++H + K D ++ + +DMY CGR++ AR VFD M R++V+WN+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 223 LITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE 282
+I Y + G +A ++F M S + PDE+ L ++VSAC + I+ L+
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE-N 241
Query: 283 KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMF 342
+R D L ALV MYA G ++ AR F +M +RN+ T+MVSGY+K + A+++F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 343 TKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQ 402
+ ++++V W +I+ Y ++ +EAL +F + + P + ++++ACANL L
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 403 LGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNA 462
+ H+ + +GL ES++ + N+LI+MY KCG ++ +FE M R+ VSW++
Sbjct: 362 KAKWVHSCIHVNGL------ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSS 415
Query: 463 MIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEH 522
MI + +G ++AL LF +M +P+ VT +GVL CSH+GLVEEG+K F+SM+ E+
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 523 GLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYV 582
+ P +HY CMVDL GRA L EA +IE+MP+ + VIWGSL++AC++H + LG++
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFA 535
Query: 583 AKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNV 642
AK++LE+EP + G VL+SN+YA RW +V +R++M ++ V K+ G S I+ G +
Sbjct: 536 AKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHE 595
Query: 643 FMVKDKRHPLNKEIYLVLKMLTREMKRVGYVPN 675
F++ DKRH + EIY L + ++K GYVP+
Sbjct: 596 FLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 243/489 (49%), Gaps = 64/489 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
LD F +L + + ++ + +H K + F++ +D+YA CG + AR V
Sbjct: 109 LDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNV 168
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVS--GFAQHD 130
FD+MS+++V TWN++I ++G +D+A +LF M + D+ ++VS G +
Sbjct: 169 FDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGS 190
R++ A+ F + + + + + ++ AG+ M + +S ++++ +
Sbjct: 229 RYNRAIYEF--LIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS----VRNLFVST 282
Query: 191 ALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEP 250
A++ Y KCGR+ A+ +FD ++++V W ++I+ Y ++ +AL VF M SGI+P
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKP 342
Query: 251 DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCV 310
D V++ SV+SACA+L + +H+ + L ++L + NAL++MYAKCG L+ R V
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 311 FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEAL 370
F++MP RNVVS +SM+ NAL + +GE +AL
Sbjct: 402 FEKMPRRNVVSWSSMI---------------------------NAL----SMHGEASDAL 430
Query: 371 GLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF +K+E+V P TF +L C +H+ +V+ G + + + +
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGC-----------SHSGLVEEGKKIFASMTDEYNITP 479
Query: 431 SL------IDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQNGYGTEALGLFKKM 483
L +D++ + + + + E+M V + V W +++ C +G LG F
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC--RIHGELELGKFAAK 537
Query: 484 LLCGEKPDH 492
+ +PDH
Sbjct: 538 RILELEPDH 546
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/690 (32%), Positives = 356/690 (51%), Gaps = 80/690 (11%)
Query: 38 TRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLK 97
T + HARI+KS ++ +I +LI Y SN N F
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASY----------------SNYNCF----------- 66
Query: 98 WGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSA 157
+DA + S+P+ S++S++ + F++++G F +M S + +
Sbjct: 67 ----NDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNL 122
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER-- 215
CA FK+G Q+H + S D ++ ++ MY +CGR+ AR+VFD M ++
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 216 ---------------------------------NIVSWNSLITCYEQNGPASDALEVFVR 242
NIVSWN +++ + ++G +A+ +F +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 243 MMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCG 302
+ G PD+VT++SV+ + G IH +++ L++ V+ +A++DMY K G
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI-SAMIDMYGKSG 301
Query: 303 KLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFT----KMLERNVVSWNALIA 358
+ +F++ + + ++G ++ V A MF + +E NVVSW ++IA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
G QNG++ EAL LFR ++ V P H T ++L AC N+A L GR H V+ L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL- 420
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
++ VG++LIDMY KCG + +F M ++ V WN+++ G + +G E +
Sbjct: 421 -----DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F+ ++ KPD ++ +L AC GL +EG KYF MS+E+G+ P +HY+CMV+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG L EA LI+ MP +PD+ +WG+LL +C++ N+ L E A+KL +EP N G YV
Sbjct: 536 GRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LLSN+YA G W EV +R M G+ K PGCSWI++ V + DK HP +I
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITE 655
Query: 659 VLKMLTREMKRVGYVPN---ASDDEAYEEQ 685
+ +++EM++ G+ PN A D +EQ
Sbjct: 656 KMDEISKEMRKSGHRPNLDFALHDVEEQEQ 685
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 198/421 (47%), Gaps = 71/421 (16%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS L C + +++H S + F+Q + +Y +CG + ARKVF
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMP----ERDQCSWNSMVSGFAQHDRFS 133
D+MS+K+V T ++++ + G +++ R+ + M E + SWN ++SGF +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 134 EALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALI 193
EA+ F K+H F + + S L + S MG +H + K D + SA+I
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 194 DMYGKCGR-------------------------------VSCARRVFDGMRER----NIV 218
DMYGK G V A +F+ +E+ N+V
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 219 SWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
SW S+I QNG +ALE+F M +G++P+ VT+ S++ AC ++AA G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSA 338
+R L N + +G+AL+DMYAKCG++N ++ VF+ MP +N+V
Sbjct: 415 VRVHLLDN-VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV------------------ 455
Query: 339 RLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANL 398
WN+L+ G++ +G+ +E + +F L R + P +F +LL+AC +
Sbjct: 456 -------------CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQV 502
Query: 399 A 399
Sbjct: 503 G 503
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 334/621 (53%), Gaps = 55/621 (8%)
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
N ++ Y G AR++FD+MS +NV +WN +++G +K I +A +F MPER+
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALL 177
SW +MV G+ Q EA F +M N FG + G +D +++ ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD--GRID--KARKLYDMM 167
Query: 178 SKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDAL 237
DV + +I + GRV AR +FD MRERN+V+W ++IT Y QN A
Sbjct: 168 P----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVAR 223
Query: 238 EVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
++F M E EV+ S ++LG
Sbjct: 224 KLFEVM----PEKTEVSWTS------------------------------MLLG------ 243
Query: 298 YAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALI 357
Y G++ +A F+ MP++ V++ +M+ G+ + + AR +F M +R+ +W +I
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMI 303
Query: 358 AGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLR 417
Y + G EAL LF ++++ V P+ + ++L+ CA LA LQ GRQ H H+V+
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF- 362
Query: 418 FLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEAL 477
+ D++V + L+ MY+KCG + +F+ +D + WN++I G A +G G EAL
Sbjct: 363 -----DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 478 GLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDL 537
+F +M G P+ VT+I +L ACS+AG +EEG + F SM + + P +HY+C VD+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 538 LGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPY 597
LGRAG +D+A LIE+M ++PDA +WG+LL ACK H + L E AKKL E EP N+G Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 598 VLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKD-KRHPLNKEI 656
VLLS++ A +WG+V VRK MR V K PGCSWIE+ V++F K HP I
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 657 YLVLKMLTREMKRVGYVPNAS 677
++L+ ++ GY P+ S
Sbjct: 598 LMMLEKTDGLLREAGYSPDCS 618
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 215/508 (42%), Gaps = 104/508 (20%)
Query: 92 ITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE 151
I+ L + G I++A + F S+ + SWNS+VSG+ + EA F +M N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----- 78
Query: 152 YSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDG 211
V + L+ Y K + AR VF+
Sbjct: 79 ----------------------------------VVSWNGLVSGYIKNRMIVEARNVFEL 104
Query: 212 MRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEG 271
M ERN+VSW +++ Y Q G +A +F RM E +EV+
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWT--------------- 145
Query: 272 LQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK 331
V+ L+D G++++AR ++D MP+++VV+ T+M+ G +
Sbjct: 146 -----------------VMFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
V ARL+F +M ERNVV+W +I GY QN + A LF ++ + T ++ ++
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSM 240
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L LG + F + N++I + + G + R+F+
Sbjct: 241 L----------LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEG 511
M +RD +W MI + G+ EAL LF +M G +P ++I +L C+ ++ G
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 512 RKYFSSMSKEHGLAPLKDHY---TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
R+ + + + D + ++ + + G L +AK + + + D ++W S+++
Sbjct: 351 RQVHAHLVR----CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIIS 405
Query: 569 ACKVHRNIMLGEYVAKKLLEIEPSNSGP 596
H LGE K E+ S + P
Sbjct: 406 GYASHG---LGEEALKIFHEMPSSGTMP 430
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C S+ R+VHA +++ QF ++++ + L+ +Y KCG L A+ VFD+ S+K+
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWNSMVSGFAQHDRFSEALGYFV 140
+ WNSII+G G ++A ++F MP ++ + ++++ + + E L F
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 141 KMHSE---NFALSEYSFGSALSACAGSVDFKM 169
M S+ + YS + AG VD M
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/662 (34%), Positives = 348/662 (52%), Gaps = 78/662 (11%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQNRLIDVYAKC-GCLYGARKVFDK 79
+ ++ +C S V R ++K+ F S++ + LID++ K A KVFDK
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 80 MSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYF 139
MS NV TW +IT ++ GF +A R F M ++SGF
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDM----------VLSGF------------- 265
Query: 140 VKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKC 199
S+ F LS S SACA + +G Q+H+ +S DV +L+DMY KC
Sbjct: 266 ---ESDKFTLS-----SVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKC 315
Query: 200 ---GRVSCARRVFDGMRERNIVSWNSLITCYEQN-GPASDALEVFVRMMASG-IEPDEVT 254
G V R+VFD M + +++SW +LIT Y +N A++A+ +F M+ G +EP+ T
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRM 314
+S AC +L+ + G Q VLG A F R
Sbjct: 376 FSSAFKACGNLSDPRVGKQ---------------VLGQA-----------------FKRG 403
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
N S++S + K+ ++ A+ F + E+N+VS+N + G +N E+A L
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS 463
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ + + +TF +LL+ AN+ ++ G Q H+ VVK GL + V N+LI
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL------SCNQPVCNALIS 517
Query: 435 MYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVT 494
MY KCGS++ R+F M R+ +SW +MI G A++G+ L F +M+ G KP+ VT
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 495 MIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAM 554
+ +L ACSH GLV EG ++F+SM ++H + P +HY CMVDLL RAG L +A I M
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 555 PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVV 614
P Q D ++W + L AC+VH N LG+ A+K+LE++P+ Y+ LSN+YA G+W E
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEEST 697
Query: 615 RVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
+R+ M++R +VK+ GCSWIE+ ++ F V D HP +IY L L E+KR GYVP
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Query: 675 NA 676
+
Sbjct: 758 DT 759
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 268/563 (47%), Gaps = 75/563 (13%)
Query: 17 LDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKV 76
+DS F+ LL SC+R++ + VHAR+I+ + + N LI +Y+K G A V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
F+ M R F +RD SW++M++ + + R +A+
Sbjct: 120 FETM-------------------------RRFG---KRDVVSWSAMMACYGNNGRELDAI 151
Query: 137 GYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS-RYSSDVYMGSALIDM 195
FV+ ++Y + + + AC+ S +G L K+ + SDV +G +LIDM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 196 YGKC-GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
+ K A +VFD M E N+V+W +IT Q G +A+ F+ M+ SG E D+ T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC---GKLNEARCVF 311
L+SV SACA L G Q+H+ +R L +D+ +LVDMYAKC G +++ R VF
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIR-SGLVDDVEC--SLVDMYAKCSADGSVDDCRKVF 328
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
DRM +V+S T++++GY K ++ + EA+
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLAT------------------------------EAIN 358
Query: 372 LF-RLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGN 430
LF ++ + V P H+TF + AC NL+D ++G+Q K GL S+ V N
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL------ASNSSVAN 412
Query: 431 SLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKP 490
S+I M++K +ED R FE++ E++ VS+N + G +N +A L ++
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 491 DHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTL 550
T +L ++ G + +G + S + K GL+ + ++ + + G +D A +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 551 IEAMPMQPDAVIWGSLLAACKVH 573
M + + + W S++ H
Sbjct: 532 FNFMENR-NVISWTSMITGFAKH 553
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 233/533 (43%), Gaps = 89/533 (16%)
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRV 208
+ +F S L +C + DF++G VHA L + D + ++LI +Y K G + A V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 209 FDGMR---ERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASL 265
F+ MR +R++VSW++++ CY NG DA++VFV + G+ P++ +V+ AC++
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 266 AAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC-GKLNEARCVFDRMPIRNVVSETS 324
G LM+ +D+ +G +L+DM+ K A VFD+M
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS--------- 230
Query: 325 MVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPT 384
E NVV+W +I Q G EA+ F +
Sbjct: 231 ----------------------ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 385 HYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC---GS 441
+T ++ +ACA L +L LG+Q H+ ++ GL D V SL+DMY KC GS
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGL------VDD--VECSLVDMYAKCSADGS 320
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQN-GYGTEALGLFKKMLLCGE-KPDHVTMIGVL 499
V+D ++F+ M + +SW A+I G +N TEA+ LF +M+ G +P+H T
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMP---- 555
AC + G++ K GLA ++ + ++ +++A+ E++
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 556 ------------------------------MQPDAVIWGSLLAACKVHRNIMLGEYVAKK 585
+ A + SLL+ +I GE + +
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 586 LLEIEPSNSGPYV-LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEIL 637
++++ S + P L +MY++ G RV M R V+ SW ++
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI-----SWTSMI 547
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 343/610 (56%), Gaps = 35/610 (5%)
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
YG RK N F N+++ K G + + L S RD +WN+++S Q++
Sbjct: 227 YGLRK-----GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 131 RFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHAL-LSKSRYSSDVYMG 189
+ EAL Y +M E E++ S L AC+ + G ++HA L + ++G
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 190 SALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMAS-GI 248
SAL+DMY C +V RRVFDGM +R I WN++I Y QN +AL +F+ M S G+
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
+ T+A VV AC AF IH +++ L D + N L+DMY++ GK++ A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+F +M R++V+ +M++GY + + A L+ KM QN E +
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM----------------QNLERKV 504
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
+ G R+ S+ P T +L +CA L+ L G++ H + +K+ L +D+ V
Sbjct: 505 SKGASRV----SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL------ATDVAV 554
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
G++L+DMY KCG ++ ++F+ + +++ ++WN +I+ +G G EA+ L + M++ G
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAK 548
KP+ VT I V ACSH+G+V+EG + F M ++G+ P DHY C+VDLLGRAG + EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 549 TLIEAMPMQPD-AVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
L+ MP + A W SLL A ++H N+ +GE A+ L+++EP+ + YVLL+N+Y+
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G W + VR+ M+++GV K+PGCSWIE V+ F+ D HP ++++ L+ L M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 668 KRVGYVPNAS 677
++ GYVP+ S
Sbjct: 795 RKEGYVPDTS 804
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/574 (27%), Positives = 269/574 (46%), Gaps = 87/574 (15%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASE-IFIQNRLIDVYAKCGCLYGARKV 76
D+ F LL + + + +++HA + K + + + + N L+++Y KCG KV
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 77 FDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEAL 136
FD++S ER+Q SWNS++S +++ AL
Sbjct: 156 FDRIS-------------------------------ERNQVSWNSLISSLCSFEKWEMAL 184
Query: 137 GYFVKMHSENFALSEYSFGSALSACAG---SVDFKMGTQVHAL-LSKSRYSSDVYMGSAL 192
F M EN S ++ S ++AC+ MG QVHA L K +S ++ + L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTL 242
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+ MYGK G+++ ++ + R++V+WN++++ QN +ALE M+ G+EPDE
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFD 312
T++SV+ AC+ L + G ++HA ++ L + +G+ALVDMY C ++ R VFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 313 RMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGL 372
M R + +M++GY++ K A L+F M EE+ GL
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM---------------------EESAGL 401
Query: 373 FRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSL 432
T ++ AC H VVK GL + D FV N+L
Sbjct: 402 L---------ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL------DRDRFVQNTL 446
Query: 433 IDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKML-------- 484
+DMY + G ++ RIF M +RD V+WN MI G + + +AL L KM
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 485 ---LCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRA 541
KP+ +T++ +L +C+ + +G++ + + ++ LA + +VD+ +
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 542 GCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
GCL ++ + + +P Q + + W ++ A +H N
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/475 (30%), Positives = 226/475 (47%), Gaps = 48/475 (10%)
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
+ A +F S R W ++ + + EA+ +V M Y+F + L A
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSD-VYMGSALIDMYGKCGRVSCARRVFDGMRERNIVS 219
A D ++G Q+HA + K Y D V + + L+++Y KCG +VFD + ERN VS
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 166
Query: 220 WNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL----QIH 275
WNSLI+ ALE F M+ +EP TL SVV+AC++L EGL Q+H
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVH 225
Query: 276 ARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSV 335
A +R +L + ++ N LV MY K GKL
Sbjct: 226 AYGLRKGELNSFII--NTLVAMYGKLGKL------------------------------- 252
Query: 336 KSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNAC 395
S++++ R++V+WN +++ QN + EAL R + E V P +T ++L AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
++L L+ G++ H + +K+G + + FVG++L+DMY C V G R+F+ M +R
Sbjct: 313 SHLEMLRTGKELHAYALKNG-----SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKM-LLCGEKPDHVTMIGVLCACSHAGLVEEGRKY 514
WNAMI G +QN + EAL LF M G + TM GV+ AC +G ++
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEA 426
Query: 515 FSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAA 569
+ GL + ++D+ R G +D A + M + D V W +++
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 14/265 (5%)
Query: 332 ASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNL 391
AS+V A +F R+ W L+ ++ EA+ + + + P +Y F L
Sbjct: 45 ASAVSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 392 LNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFET 451
L A A+L D++LG+Q H HV K G G +S + V N+L+++Y KCG ++F+
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGY----GVDS-VTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 452 MVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE- 510
+ ER+ VSWN++I AL F+ ML +P T++ V+ ACS+ + E
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 511 --GRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
G++ + ++ L +V + G+ G L +K L+ + + D V W ++L+
Sbjct: 219 MMGKQVHAYGLRKGELNSFI--INTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLS 275
Query: 569 A-CKVHRNIMLGEYVAKKLLE-IEP 591
+ C+ + + EY+ + +LE +EP
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEP 300
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/689 (33%), Positives = 361/689 (52%), Gaps = 106/689 (15%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
L+ + R KS S +++HA+ I++Q S + +I +Y L+ A +F + +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
V W S+I +C F FS+AL FV+M +
Sbjct: 70 VLAWKSVI-----------------------RC--------FTDQSLFSKALASFVEMRA 98
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGK------ 198
F S L +C +D + G VH + + D+Y G+AL++MY K
Sbjct: 99 SGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGS 158
Query: 199 ---CGRV-------------------SC--------ARRVFDGMRERNIVSWNSLITCYE 228
G V +C RRVF+ M +++VS+N++I Y
Sbjct: 159 KISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYA 218
Query: 229 QNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDL 288
Q+G DAL + M + ++PD TL+SV+ + +G +IH ++R + + +D+
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIR-KGIDSDV 277
Query: 289 VLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
+G++LVDMYA K++ ++ + +F+++ R
Sbjct: 278 YIGSSLVDMYA-------------------------------KSARIEDSERVFSRLYCR 306
Query: 349 NVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAH 408
+ +SWN+L+AGY QNG EAL LFR + V P F +++ ACA+LA L LG+Q H
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 409 THVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCA 468
+V++ G S+IF+ ++L+DMY KCG+++ +IF+ M D VSW A+I+G A
Sbjct: 367 GYVLRGGF------GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 469 QNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK 528
+G+G EA+ LF++M G KP+ V + VL ACSH GLV+E YF+SM+K +GL
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 529 DHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLE 588
+HY + DLLGRAG L+EA I M ++P +W +LL++C VH+N+ L E VA+K+
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 589 IEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDK 648
++ N G YVL+ NMYA GRW E+ ++R MRK+G+ K+P CSWIE+ + F+ D+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 649 RHPLNKEIYLVLKMLTREMKRVGYVPNAS 677
HP +I LK + +M++ GYV + S
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 225/458 (49%), Gaps = 45/458 (9%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKC---GCLYGAR 74
D + F +L SC + VH I++ +++ N L+++YAK G
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 75 KVFDKMSNKNVFTWNSII---TGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDR 131
VFD+M + + + + T ++ +G ID R+F MP +D S+N++++G+AQ
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 132 FSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSA 191
+ +AL +M + + ++ S L + VD G ++H + + SDVY+GS+
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 192 LIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPD 251
L+DMY K R+ + RVF + R+ +SWNSL+ Y QNG ++AL +F +M+ + ++P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 252 EVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF 311
V +SV+ ACA LA G Q+H ++R +++ + +ALVDMY+KCG + AR +F
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLR-GGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 312 DRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALG 371
DRM NV+ E VSW A+I G+ +G EA+
Sbjct: 402 DRM---NVLDE----------------------------VSWTAIIMGHALHGHGHEAVS 430
Query: 372 LFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS 431
LF +KR+ V P F +L AC+++ + + K + G ++ +
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK-----VYGLNQELEHYAA 485
Query: 432 LIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCA 468
+ D+ + G +E+ M VE W+ ++ C+
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 35/310 (11%)
Query: 9 QIVGDLAFLDSSPFAKLLDSCLRSKS----VSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
++V ++ D P + L S L S V + +H +I+ S+++I + L+D+Y
Sbjct: 228 RMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVS 124
AK + + +VF ++ ++ +WNS++ G ++ G
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG------------------------- 322
Query: 125 GFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSS 184
R++EAL F +M + +F S + ACA +G Q+H + + + S
Sbjct: 323 ------RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 185 DVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMM 244
++++ SAL+DMY KCG + AR++FD M + VSW ++I + +G +A+ +F M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 245 ASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKL 304
G++P++V +V++AC+ + E + + L +L A+ D+ + GKL
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 305 NEARCVFDRM 314
EA +M
Sbjct: 497 EEAYNFISKM 506
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 5 RSVKQIVGDLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVY 64
R +Q+V + F+ ++ +C ++ +++H +++ F S IFI + L+D+Y
Sbjct: 329 RLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
Query: 65 AKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPER----DQCSWN 120
+KCG + ARK+FD+M+ + +W +II G G +A LF M + +Q ++
Sbjct: 389 SKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFV 448
Query: 121 SMVSGFAQHDRFSEALGYF---VKMHSENFALSEYSFGSALSACAGSVD 166
++++ + EA GYF K++ N L Y+ + L AG ++
Sbjct: 449 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/687 (32%), Positives = 356/687 (51%), Gaps = 80/687 (11%)
Query: 12 GDLAFL-DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCL 70
GD AF+ D + +L C R + + + VH +K + E+ + N L+D+Y+KCGC+
Sbjct: 284 GDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 71 YGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHD 130
A+ +F +NKNV SWN+MV GF+
Sbjct: 344 TNAQMIFKMNNNKNV-------------------------------VSWNTMVGGFSAEG 372
Query: 131 RFSEALGYFVKMHS--ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYM 188
+M + E+ E + +A+ C ++H K + + +
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELV 432
Query: 189 GSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGI 248
+A + Y KCG +S A+RVF G+R + + SWN+LI + Q+ +L+ ++M SG+
Sbjct: 433 ANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 492
Query: 249 EPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEAR 308
PD T+ S++SAC+ L + + G ++H ++R L DL + +++ +Y CG+L +
Sbjct: 493 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSLYIHCGELCTVQ 551
Query: 309 CVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEE 368
+FD M ++++VSWN +I GY QNG +
Sbjct: 552 ALFDAME-------------------------------DKSLVSWNTVITGYLQNGFPDR 580
Query: 369 ALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFV 428
ALG+FR + + + + AC+ L L+LGR+AH + +KH L E D F+
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL------EDDAFI 634
Query: 429 GNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGE 488
SLIDMY K GS+ ++F + E+ SWNAMI+G +G EA+ LF++M G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 489 KPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEA- 547
PD +T +GVL AC+H+GL+ EG +Y M GL P HY C++D+LGRAG LD+A
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 548 KTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAEL 607
+ + E M + D IW SLL++C++H+N+ +GE VA KL E+EP YVLLSN+YA L
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814
Query: 608 GRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREM 667
G+W +V +VR+ M + + K GCSWIE+ V F+V ++ +EI + +L ++
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Query: 668 KRVGYVPNA-------SDDEAYEEQNG 687
++GY P+ S++E E+ G
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKIEQLRG 901
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 165/653 (25%), Positives = 291/653 (44%), Gaps = 124/653 (18%)
Query: 5 RSVKQIVGD------LAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKS-QFASEIFIQ 57
R+V++ VGD L LL + + K + R++H + S + ++ +
Sbjct: 64 RTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLC 123
Query: 58 NRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQC 117
R+I +YA CG +R VFD + +KN+F
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLF------------------------------- 152
Query: 118 SWNSMVSGFAQHDRFSEALGYFVKMHSENFALSE-YSFGSALSACAGSVDFKMGTQVHAL 176
WN+++S +++++ + E L F++M S L + +++ + ACAG D +G VH L
Sbjct: 153 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 177 LSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDA 236
+ K+ DV++G+AL+ YG G V+ A ++FD M ERN+VSWNS+I + NG + ++
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 237 LEVFVRMMAS----GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGN 292
+ MM PD TL +V+ CA G +H ++ +L +LVL N
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNN 331
Query: 293 ALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLE----- 347
AL+DMY+KCG + A+ +F +NVVS +MV G++ + +ML
Sbjct: 332 ALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDV 391
Query: 348 ------------------------------------RNVVSWNALIAGYTQNGENEEALG 371
N + NA +A Y + G A
Sbjct: 392 KADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQR 451
Query: 372 LFRLLKRESV-------------------------------CPTHYTFGNLLNACANLAD 400
+F ++ ++V P +T +LL+AC+ L
Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 401 LQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSW 460
L+LG++ H ++++ L E D+FV S++ +Y+ CG + +F+ M ++ VSW
Sbjct: 512 LRLGKEVHGFIIRNWL------ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 461 NAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSK 520
N +I G QNG+ ALG+F++M+L G + ++M+ V ACS + GR+ + K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 521 EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVH 573
H L ++D+ + G + ++ + + + A W +++ +H
Sbjct: 626 -HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIH 676
>sp|Q9LHN5|PP242_ARATH Putative pentatricopeptide repeat-containing protein At3g18840
OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1
Length = 678
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/679 (33%), Positives = 363/679 (53%), Gaps = 48/679 (7%)
Query: 33 KSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSII 92
K + D H R IKS N+L+++Y+K G L AR VFD+M +NV++WN++I
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 93 TGLLKWGFIDDASRLFASMP-ERDQCSWNSMVSGFAQHDRF-SEALGYFVKMH---SENF 147
+K+ + +A LF S ERD ++N+++SGFA+ D SEA+ F +MH ++
Sbjct: 62 AAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDI 121
Query: 148 ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARR 207
+ +++ + + A + G Q+H +L K+ + S+LI MY KCG+
Sbjct: 122 WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 208 VFDGM------------------RERNI----------------VSWNSLITCYEQNGPA 233
+F+G RE +I +SWN+LI Y QNG
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 234 SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNA 293
+AL++ V M +G++ DE + +V++ +SL + K G ++HAR+++ N V +
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFV-SSG 300
Query: 294 LVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSW 353
+VD+Y KCG + A N+ S +SM+ GY+ + A+ +F + E+N+V W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 354 NALIAGYTQNGENEEALGLFR-LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVV 412
A+ GY + + L L R + E+ P ++L AC+ A ++ G++ H H +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 413 KHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGY 472
+ G+ D + + +DMY KCG+VE RIF++ ERD V +NAMI GCA +G+
Sbjct: 421 RTGILM------DKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGH 474
Query: 473 GTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYT 532
++ F+ M G KPD +T + +L AC H GLV EG KYF SM + + ++P HYT
Sbjct: 475 EAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYT 534
Query: 533 CMVDLLGRAGCLDEAKTLIEAM-PMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEP 591
CM+DL G+A LD+A L+E + ++ DAVI G+ L AC ++N L + V +KLL IE
Sbjct: 535 CMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEG 594
Query: 592 SNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHP 651
SN Y+ ++N YA GRW E+ R+R MR + + GCSW I ++F D H
Sbjct: 595 SNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHY 654
Query: 652 LNKEIYLVLKMLTREMKRV 670
+ IY +L +T+++ +
Sbjct: 655 ETEAIYAMLHFVTKDLSEI 673
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L+ KS+ + VHAR++K+ S F+ + ++DVY KCG + A
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFA---QHDRFSE 134
N+++ +S+I G G + +A RLF S+ E++ W +M G+ Q D E
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 135 ALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALID 194
F+ +E S L AC+ + G ++H ++ D + +A +D
Sbjct: 379 LARAFIA--NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVD 436
Query: 195 MYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVT 254
MY KCG V A R+FD ER+ V +N++I +G + + + F M G +PDE+T
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 255 LASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
+++SAC EG + ++ + + ++D+Y K +L++A
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 335/620 (54%), Gaps = 44/620 (7%)
Query: 56 IQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERD 115
++ + + KC + R++ +M +V N +I ++ G + +S LF+ E +
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 116 QCSWNSMVSGFAQH-DRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVH 174
S+N M+ G + AL + +M ++++ ACA + +G VH
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 175 ALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPAS 234
+ L K DV++ +LI MY KCG+V AR++FD + ER+ VSWNS+I+ Y + G A
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 235 DALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNAL 294
DA+++F +M G EPDE TL S++ AC+ L + G ++ + +K+ LG+ L
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKL 274
Query: 295 VDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWN 354
+ MY KCG L+ SAR +F +M++++ V+W
Sbjct: 275 ISMYGKCGDLD-------------------------------SARRVFNQMIKKDRVAWT 303
Query: 355 ALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKH 414
A+I Y+QNG++ EA LF +++ V P T +L+AC ++ L+LG+Q TH +
Sbjct: 304 AMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL 363
Query: 415 GLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGT 474
L + +I+V L+DMY KCG VE+ R+FE M ++ +WNAMI A G+
Sbjct: 364 SL------QHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAK 417
Query: 475 EALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCM 534
EAL LF +M + P +T IGVL AC HAGLV +G +YF MS GL P +HYT +
Sbjct: 418 EALLLFDRMSV---PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Query: 535 VDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEI-EPSN 593
+DLL RAG LDEA +E P +PD ++ ++L AC +++ + E + L+E+ E N
Sbjct: 475 IDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKN 534
Query: 594 SGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLN 653
+G YV+ SN+ A++ W E ++R LMR RGVVK PGCSWIEI G + F+
Sbjct: 535 AGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCG 594
Query: 654 KEIY-LVLKMLTREMKRVGY 672
+E + +L EMKR Y
Sbjct: 595 REDSGSLFDLLVEEMKRERY 614
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D +L +C + R + I + F+ ++LI +Y KCG L AR+VF
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
++M K+ W ++IT ++Q+ + SEA
Sbjct: 292 NQMIKKDRVAWTAMIT-------------------------------VYSQNGKSSEAFK 320
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M + + + LSAC ++G Q+ S+ ++Y+ + L+DMYG
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCGRV A RVF+ M +N +WN++IT Y G A +AL +F RM + P ++T
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG 437
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
V+SAC +G + + L + ++D+ ++ G L+EA +R P
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 107/285 (37%), Gaps = 74/285 (25%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D+ + +L +C ++ +++ + I++ L+D+Y KCG + A +VF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
+ M KN TWN++IT G +A LF DR S
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLF---------------------DRMS---- 427
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS--RYSSDVYMGSALIDM 195
S+ +F LSAC VHA L RY + + M
Sbjct: 428 ---------VPPSDITFIGVLSAC-----------VHAGLVHQGCRYFHE------MSSM 461
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
+G ++ + ++I + G +A E R +PDE+ L
Sbjct: 462 FGLVPKIE---------------HYTNIIDLLSRAGMLDEAWEFMERFPG---KPDEIML 503
Query: 256 ASVVSAC---ASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDM 297
A+++ AC +A ++ +++ + + N ++ N L DM
Sbjct: 504 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADM 548
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 321/558 (57%), Gaps = 38/558 (6%)
Query: 119 WNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLS 178
+NS+++GF + F E L F+ + L ++F L AC + K+G +H+L+
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 179 KSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALE 238
K ++ DV ++L+ +Y GR++ A ++FD + +R++V+W +L + Y +G +A++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 239 VFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMY 298
+F +M+ G++PD + V+SAC + G I + E +N V
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV--------- 249
Query: 299 AKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIA 358
T++V+ YAK ++ AR +F M+E+++V+W+ +I
Sbjct: 250 -----------------------RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQ 286
Query: 359 GYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRF 418
GY N +E + LF + +E++ P ++ L++CA+L L LG + + +H F
Sbjct: 287 GYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRH--EF 344
Query: 419 LSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALG 478
L+ ++F+ N+LIDMY KCG++ G +F+ M E+D V NA I G A+NG+ +
Sbjct: 345 LT----NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 479 LFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLL 538
+F + G PD T +G+LC C HAGL+++G ++F+++S + L +HY CMVDL
Sbjct: 401 VFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLW 460
Query: 539 GRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYV 598
GRAG LD+A LI MPM+P+A++WG+LL+ C++ ++ L E V K+L+ +EP N+G YV
Sbjct: 461 GRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 599 LLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYL 658
LSN+Y+ GRW E VR +M K+G+ K PG SWIE+ G V+ F+ DK HPL+ +IY
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYA 580
Query: 659 VLKMLTREMKRVGYVPNA 676
L+ L EM+ +G+VP
Sbjct: 581 KLEDLGNEMRLMGFVPTT 598
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 199/459 (43%), Gaps = 81/459 (17%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
+L F +L +C R+ S +H+ ++K F ++ L+ +Y+ G L
Sbjct: 108 YLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRL----- 162
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+DA +LF +P+R +W ++ SG+ R EA
Sbjct: 163 --------------------------NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDM 195
+ F KM Y LSAC D G + + + + ++ + L+++
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 196 YGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255
Y KCG++ AR VFD M E++IV+W+++I Y N + +E+F++M+ ++PD+ ++
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 256 ASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
+S+CASL A G + + R E L N L + NAL+DMYAKCG + VF M
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTN-LFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 316 IRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRL 375
+++V + +SG AK NG + + +F
Sbjct: 376 EKDIVIMNAAISGLAK-------------------------------NGHVKLSFAVFGQ 404
Query: 376 LKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNS---- 431
++ + P TF LL C H +++ GLRF + + +
Sbjct: 405 TEKLGISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 432 --LIDMYMKCGSVEDGCRIFETMVER-DWVSWNAMIVGC 467
++D++ + G ++D R+ M R + + W A++ GC
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 196/425 (46%), Gaps = 42/425 (9%)
Query: 172 QVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNG 231
Q+H L D ++ + L+ + + +F + NI +NSLI + N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 232 PASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
+ L++F+ + G+ T V+ AC ++ K G+ +H+ +++C +D+
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC-GFNHDVAAM 149
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
+L+ +Y+ G+LN+A +FD +P R+VV+ T++ SGY
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGY---------------------- 187
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
T +G + EA+ LF+ + V P Y +L+AC ++ DL G +
Sbjct: 188 ---------TTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW----I 234
Query: 412 VKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNG 471
VK+ + S FV +L+++Y KCG +E +F++MVE+D V+W+ MI G A N
Sbjct: 235 VKYMEEMEMQKNS--FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 472 YGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY 531
+ E + LF +ML KPD +++G L +C+ G ++ G S + + L L
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MA 351
Query: 532 TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA--ACKVHRNIMLGEYVAKKLLEI 589
++D+ + G + + + M + D VI + ++ A H + + + L I
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 590 EPSNS 594
P S
Sbjct: 411 SPDGS 415
Score = 122 bits (307), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 36/346 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
DS ++L +C+ + + + + + F++ L+++YAKCG + AR V
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV- 269
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
F SM E+D +W++M+ G+A + E +
Sbjct: 270 ------------------------------FDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F++M EN ++S LS+CA +G +L+ + + ++++M +ALIDMY
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG ++ VF M+E++IV N+ I+ +NG + VF + GI PD T
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
++ C ++GL+ + L+ + +VD++ + G L++A + MP+R
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 318 -NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQ 362
N + +++SG + A + +++ + WNA Y Q
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIA--LEPWNA--GNYVQ 521
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/524 (39%), Positives = 306/524 (58%), Gaps = 11/524 (2%)
Query: 158 LSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNI 217
L CA + +HA + K + + L+++YGKCG S A +VFD M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 218 VSWNSLITCYEQNGPASDALEVFVRMMASG-IEPDEVTLASVVSACASLAAFKEGLQIHA 276
++W S++T Q + L VF + +S + PD+ +++V ACA+L + G Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 277 RLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVK 336
+ E ND V+ ++LVDMYAKCG LN A+ VFD + ++N +S T+MVSGYAK+ +
Sbjct: 130 HFIVSE-YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 337 SARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV-CPTHYTFGNLLNAC 395
A +F + +N+ SW ALI+G+ Q+G+ EA +F ++RE V +++ AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 396 ANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVER 455
ANLA GRQ H GL G +S +F+ N+LIDMY KC V IF M R
Sbjct: 249 ANLAASIAGRQVH------GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 456 DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYF 515
D VSW ++IVG AQ+G +AL L+ M+ G KP+ VT +G++ ACSH G VE+GR+ F
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 516 SSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKVHRN 575
SM+K++G+ P HYTC++DLLGR+G LDEA+ LI MP PD W +LL+ACK
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 576 IMLGEYVAKKLL-EIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGVVKQPGCSWI 634
+G +A L+ + + Y+LLSN+YA WG+V R+ + + V K PG S +
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Query: 635 EILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNAS 677
E+ VF + HPL ++I+ +LK L EM+ R GYVP+ S
Sbjct: 483 EVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+ L+ +C S+ R+VH I S++A++ +++ L+D+YAKCG L A+ VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D + KN +W ++++G K G ++A LF +P ++ SW +++SGF Q + EA
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 138 YFVKMHSENF-ALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F +M E L S + ACA G QVH L+ + S V++ +ALIDMY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
KC V A+ +F MR R++VSW SLI Q+G A AL ++ M++ G++P+EVT
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMP 315
++ AC+ + ++G ++ + + +R L L+D+ + G L+EA + MP
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMP 402
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 240/532 (45%), Gaps = 109/532 (20%)
Query: 26 LDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNV 85
L C R+++++ + +HA I+K + N L++VY KCG A +VFD+M +++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 86 FTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSE 145
W S++T L + + +SG S ++
Sbjct: 70 IAWASVLTALNQ-----------------------ANLSGKTLSVFSSVGSSSGLRP--- 103
Query: 146 NFALSEYSFGSALSACA--GSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVS 203
++ F + + ACA GS+D G QVH S Y++D + S+L+DMY KCG ++
Sbjct: 104 ----DDFVFSALVKACANLGSIDH--GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 204 CARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVF----VRMMAS------------- 246
A+ VFD +R +N +SW ++++ Y ++G +ALE+F V+ + S
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 247 GIEP---------------DEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLG 291
G+E D + L+S+V ACA+LAA G Q+H L+ + + +
Sbjct: 218 GLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHG-LVIALGFDSCVFIS 276
Query: 292 NALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVV 351
NAL+DMYAKC + A+ +F RM R+VVS TS++ G A
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMA--------------------- 315
Query: 352 SWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHV 411
Q+G+ E+AL L+ + V P TF L+ AC+++ ++ GR+ +
Sbjct: 316 ----------QHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 412 VK-HGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGCAQ 469
K +G+R + L+D+ + G +++ + TM D +W A++ C +
Sbjct: 366 TKDYGIR------PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKR 419
Query: 470 NGYGTEALGLFKKMLLCGEKPDHVTMI---GVLCACSHAGLVEEGRKYFSSM 518
G G + + ++ + D T I + + S G V E R+ M
Sbjct: 420 QGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 74/316 (23%)
Query: 16 FLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARK 75
LD + ++ +C + R+VH +I F S +FI N LID+YAKC + A+
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294
Query: 76 VFDKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEA 135
+F +M +++V +W S+I G+ AQH + +A
Sbjct: 295 IFSRMRHRDVVSWTSLIVGM-------------------------------AQHGQAEKA 323
Query: 136 LGYFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKS---RYSSDVYMGSAL 192
L + M S +E +F + AC+ + G ++ ++K R S Y + L
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY--TCL 381
Query: 193 IDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDE 252
+D+ G+ G + D E + M PDE
Sbjct: 382 LDLLGRSGLL--------------------------------DEAENLIHTMP--FPPDE 407
Query: 253 VTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKC---GKLNEARC 309
T A+++SAC + G++I L+ KL+ D L ++YA GK++EAR
Sbjct: 408 PTWAALLSACKRQGRGQMGIRIADHLVSSFKLK-DPSTYILLSNIYASASLWGKVSEARR 466
Query: 310 VFDRMPIRNVVSETSM 325
M +R +S+
Sbjct: 467 KLGEMEVRKDPGHSSV 482
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 327/589 (55%), Gaps = 42/589 (7%)
Query: 89 NSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFA 148
++I + G +++A LF MP+RD +W +M++G+A + + A F +M + +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 149 LSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG-RVSCARR 207
+E++ S L +C G VH ++ K +Y+ +A+++MY C + A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 208 VFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAA 267
+F ++ +N V+W +LIT + G L+++ +M+ E + V A AS+ +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 268 FKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVS 327
G QIHA +++ +++L + N+++D+Y +CG L+EA+ F M
Sbjct: 229 VTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME------------ 275
Query: 328 GYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYT 387
++++++WN LI+ + ++ EAL +F+ + + P YT
Sbjct: 276 -------------------DKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYT 315
Query: 388 FGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCR 447
F +L+ ACAN+A L G+Q H + + G ++ + N+LIDMY KCG++ D R
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGF------NKNVELANALIDMYAKCGNIPDSQR 369
Query: 448 IFETMVER-DWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAG 506
+F +V+R + VSW +M++G +GYG EA+ LF KM+ G +PD + + VL AC HAG
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAG 429
Query: 507 LVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSL 566
LVE+G KYF+ M E+G+ P +D Y C+VDLLGRAG + EA L+E MP +PD WG++
Sbjct: 430 LVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Query: 567 LAACKVHR-NIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMRKRGV 625
L ACK H+ N ++ A+K++E++P G YV+LS +YA G+W + RVRK+MR G
Sbjct: 490 LGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGN 549
Query: 626 VKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
K+ G SWI + V F V DK P +Y VL +L E + GYVP
Sbjct: 550 KKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVP 598
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 33/300 (11%)
Query: 34 SVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIIT 93
SV+ +++HA +IK F S + + N ++D+Y +CG
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG------------------------- 262
Query: 94 GLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYS 153
++ +A F M ++D +WN+++S + D SEAL F + S+ F + Y+
Sbjct: 263 ------YLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYT 315
Query: 154 FGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMR 213
F S ++ACA G Q+H + + ++ +V + +ALIDMY KCG + ++RVF +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 214 E-RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL 272
+ RN+VSW S++ Y +G ++A+E+F +M++SGI PD + +V+SAC ++GL
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL 435
Query: 273 QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKA 332
+ + + D + N +VD+ + GK+ EA + +RMP + S + G KA
Sbjct: 436 KYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKA 495
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 90/458 (19%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCG-CLYGARKVFDKM 80
+ +L SC K ++ VH ++K +++ N ++++YA C + A +F +
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 81 SNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFV 140
KN TW ++ITG G G L +
Sbjct: 174 KVKNDVTWTTLITGFTHLG------------------------DGIG-------GLKMYK 202
Query: 141 KMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCG 200
+M EN ++ Y A+ A A G Q+HA + K + S++ + ++++D+Y +CG
Sbjct: 203 QMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCG 262
Query: 201 RVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVS 260
+S A+ F M ++++++WN+LI+ E++ +S+AL +F R + G P+ T S+V+
Sbjct: 263 YLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 261 ACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVF----DRMPI 316
ACA++AA G Q+H R+ R ++ L NAL+DMYAKCG + +++ VF DR
Sbjct: 322 ACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR--- 377
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
RN+VS TSM+ GY +G EA+ LF +
Sbjct: 378 RNLVSWTSMMIGYG-------------------------------SHGYGAEAVELFDKM 406
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVG------N 430
+ P F +L+AC H +V+ GL++ + ES+ + N
Sbjct: 407 VSSGIRPDRIVFMAVLSAC-----------RHAGLVEKGLKYFNVMESEYGINPDRDIYN 455
Query: 431 SLIDMYMKCGSVEDGCRIFETM-VERDWVSWNAMIVGC 467
++D+ + G + + + E M + D +W A++ C
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 184/387 (47%), Gaps = 41/387 (10%)
Query: 188 MGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASG 247
+ + LI Y + G V AR +FD M +R++V+W ++IT Y + + A E F M+ G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 248 IEPDEVTLASVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEA 307
P+E TL+SV+ +C ++ G +H +++ + L + NA+++MYA C EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKL-GMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 308 RC-VFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGEN 366
C +F + ++N V+ T+ LI G+T G+
Sbjct: 166 ACLIFRDIKVKNDVTWTT-------------------------------LITGFTHLGDG 194
Query: 367 EEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDI 426
L +++ + E+ T Y + A A++ + G+Q H V+K G +S++
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF------QSNL 248
Query: 427 FVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLC 486
V NS++D+Y +CG + + F M ++D ++WN +I ++ +EAL +F++
Sbjct: 249 PVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQ 307
Query: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDE 546
G P+ T ++ AC++ + G++ + + G + ++D+ + G + +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR-RGFNKNVELANALIDMYAKCGNIPD 366
Query: 547 AKTLIEAMPMQPDAVIWGSLLAACKVH 573
++ + + + + V W S++ H
Sbjct: 367 SQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 9/255 (3%)
Query: 315 PIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFR 374
P ++ + T+++ Y + V+ AR +F +M +R+VV+W A+I GY + N A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 375 LLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLID 434
+ ++ P +T ++L +C N+ L G H VVK G+ E ++V N++++
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGM------EGSLYVDNAMMN 154
Query: 435 MYMKCG-SVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHV 493
MY C ++E C IF + ++ V+W +I G G G L ++K+MLL +
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 494 TMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEA 553
+ + A + V G++ +S+ K G ++DL R G L EAK
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 554 MPMQPDAVIWGSLLA 568
M D + W +L++
Sbjct: 274 ME-DKDLITWNTLIS 287
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 347/670 (51%), Gaps = 78/670 (11%)
Query: 25 LLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKN 84
+L C R +VH ++KS + N LID+Y KC A KVFD
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD------ 65
Query: 85 VFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHS 144
SMPER+ SW++++SG + +L F +M
Sbjct: 66 -------------------------SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 100
Query: 145 ENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSC 204
+ +E++F + L AC + G Q+H K + V +G++L+DMY KCGR++
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 205 ARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIE--PDEVTLASVVSAC 262
A +VF + +R+++SWN++I + G S AL+ F M + I+ PDE TL S++ AC
Sbjct: 161 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 220
Query: 263 ASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVS 321
+S G QIH L+R + + +LVD+Y KCG L
Sbjct: 221 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF---------------- 264
Query: 322 ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESV 381
SAR F ++ E+ ++SW++LI GY Q GE EA+GLF+ L+ +
Sbjct: 265 ---------------SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 382 CPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGS 441
+ +++ A+ A L+ G+Q VK SG E+ + NS++DMY+KCG
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVL--NSVVDMYLKCGL 363
Query: 442 VEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCA 501
V++ + F M +D +SW +I G ++G G +++ +F +ML +PD V + VL A
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 502 CSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAV 561
CSH+G+++EG + FS + + HG+ P +HY C+VDLLGRAG L EAK LI+ MP++P+
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 562 IWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVRKLMR 621
IW +LL+ C+VH +I LG+ V K LL I+ N YV++SN+Y + G W E R+L
Sbjct: 484 IWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGN 543
Query: 622 KRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMK-RVGYVPNAS--- 677
+G+ K+ G SW+EI V+ F + HPL I LK R ++ +GYV
Sbjct: 544 IKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHEL 603
Query: 678 ---DDEAYEE 684
DDE+ EE
Sbjct: 604 HDIDDESKEE 613
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 209/421 (49%), Gaps = 42/421 (9%)
Query: 156 SALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRER 215
S L C G QVH L KS ++ + LIDMY KC A +VFD M ER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 216 NIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIH 275
N+VSW++L++ + NG +L +F M GI P+E T ++ + AC L A ++GLQIH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 276 ARLMRCEKLRNDLV--LGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAKAS 333
C K+ +++ +GN+LVDMY+KCG++NEA VF R+ R+++S +M++G+ A
Sbjct: 131 G---FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 334 SVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGNLLN 393
A F M E N+ +E P +T +LL
Sbjct: 188 YGSKALDTFGMMQEANI---------------------------KER--PDEFTLTSLLK 218
Query: 394 ACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMV 453
AC++ + G+Q H +V+ G S + SL+D+Y+KCG + + F+ +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHC----PSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 454 ERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRK 513
E+ +SW+++I+G AQ G EA+GLFK++ + D + ++ + L+ +G++
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 514 YFSSMSK-EHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAACKV 572
+ K GL +VD+ + G +DEA+ M ++ D + W ++
Sbjct: 335 MQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVVITGYGK 391
Query: 573 H 573
H
Sbjct: 392 H 392
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 198/402 (49%), Gaps = 49/402 (12%)
Query: 22 FAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMS 81
F+ L +C ++ ++H +K F + + N L+D+Y+KCG + A KVF ++
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 82 NKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVK 141
++++ +WN++I G + G+ A F M E + +K
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN------------------------IK 205
Query: 142 MHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRY--SSDVYMGSALIDMYGKC 199
+ F L+ S L AC+ + G Q+H L +S + S + +L+D+Y KC
Sbjct: 206 ERPDEFTLT-----SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G + AR+ FD ++E+ ++SW+SLI Y Q G +A+ +F R+ + D L+S++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
A A ++G Q+ A ++ VL N++VDMY KCG ++EA F M +++V
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNV----VSWNALIAGYTQNGENEEALGLF-R 374
+S T +++GY K K + +F +ML N+ V + A+++ + +G +E LF +
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSK 439
Query: 375 LLKRESVCP--THYTFGNLLNACANLADLQLGRQAHTHVVKH 414
LL+ + P HY AC + DL LGR KH
Sbjct: 440 LLETHGIKPRVEHY-------AC--VVDL-LGRAGRLKEAKH 471
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/658 (33%), Positives = 343/658 (52%), Gaps = 71/658 (10%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F +L + ++ S++ ++VH +K + + N LI++Y K AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
D MS ERD SWNS+++G AQ+ EA+
Sbjct: 374 DNMS-------------------------------ERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVD-FKMGTQVHALLSKSRYSSDVYMGSALIDMY 196
F+++ +Y+ S L A + + + QVH K SD ++ +ALID Y
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAY 462
Query: 197 GKCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLA 256
+ + A +F+ ++V+WN+++ Y Q+ L++F M G D+ TLA
Sbjct: 463 SRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLA 521
Query: 257 SVVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPI 316
+V C L A +G Q+HA ++ DL + + ++DMY KCG ++ A+ FD +P+
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIK-SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 317 RNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLL 376
+ V+ W +I+G +NGE E A +F +
Sbjct: 581 PDDVA-------------------------------WTTMISGCIENGEEERAFHVFSQM 609
Query: 377 KRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMY 436
+ V P +T L A + L L+ GRQ H + +K +D FVG SL+DMY
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC------TNDPFVGTSLVDMY 663
Query: 437 MKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMI 496
KCGS++D +F+ + + +WNAM+VG AQ+G G E L LFK+M G KPD VT I
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 497 GVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPM 556
GVL ACSH+GLV E K+ SM ++G+ P +HY+C+ D LGRAG + +A+ LIE+M M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 557 QPDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRV 616
+ A ++ +LLAAC+V + G+ VA KLLE+EP +S YVLLSNMYA +W E+
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 617 RKLMRKRGVVKQPGCSWIEILGHVNVFMVKDKRHPLNKEIYLVLKMLTREMKRVGYVP 674
R +M+ V K PG SWIE+ +++F+V D+ + + IY +K + R++K+ GYVP
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVP 901
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/605 (25%), Positives = 270/605 (44%), Gaps = 90/605 (14%)
Query: 13 DLAFLDSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYG 72
D+ + + +L CL S V + H K + F+ L+++Y K G +
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 73 ARKVFDKMSNKNVFTWNSIITGLLKWGFIDDAS------------------RLFASMPER 114
+ +F++M ++V WN ++ L+ GF ++A RL A +
Sbjct: 199 GKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD 258
Query: 115 DQCSW--------------------NSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSF 154
D + N +S + ++S L F M + + +F
Sbjct: 259 DSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF 318
Query: 155 GSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRE 214
L+ +G QVH + K + + ++LI+MY K + AR VFD M E
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 215 RNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGL-- 272
R+++SWNS+I QNG +A+ +F++++ G++PD+ T+ SV+ A +SL EGL
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSL 435
Query: 273 --QIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYA 330
Q+H ++ + + V AL+D Y++ + EA +F+R
Sbjct: 436 SKQVHVHAIKINNVSDSFV-STALIDAYSRNRCMKEAEILFERHNF-------------- 480
Query: 331 KASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRESVCPTHYTFGN 390
++V+WNA++AGYTQ+ + + L LF L+ ++ +T
Sbjct: 481 ------------------DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 391 LLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFE 450
+ C L + G+Q H + +K SG + D++V + ++DMY+KCG + F+
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIK------SGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 451 TMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVLCACSHAGLVEE 510
++ D V+W MI GC +NG A +F +M L G PD T+ + A S +E+
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 511 GRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
GR+ ++ K L D + T +VD+ + G +D+A L + + M + W ++L
Sbjct: 637 GRQIHANALK---LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLV 692
Query: 569 ACKVH 573
H
Sbjct: 693 GLAQH 697
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 153/578 (26%), Positives = 263/578 (45%), Gaps = 93/578 (16%)
Query: 41 VHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVFDKMSNKNVFTWNSIITGLLKWGF 100
HARI+ + E F+ N LI +Y+KCG L AR+VFDKM ++++ +WNSI+
Sbjct: 61 THARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL-------- 112
Query: 101 IDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALGYFVKMHSENFALSEYSFGSALSA 160
A+ + +C ++ F + + Y +M + L
Sbjct: 113 --------AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRM----------TLSPMLKL 154
Query: 161 CAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSW 220
C S H K D ++ AL+++Y K G+V + +F+ M R++V W
Sbjct: 155 CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 221 NSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL------------------------A 256
N ++ Y + G +A+++ +SG+ P+E+TL A
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDA 274
Query: 257 SVVSAC----ASLAAFKEGLQIHARL----------MRCEKLRNDLVLGNAL-VDMYAKC 301
S VS L+ + Q A L + C+++ L+L A+ VD A
Sbjct: 275 SSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA-L 333
Query: 302 GKLNEARCVFDRMPIRNVVS-ETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGY 360
G+ + C+ ++ + +++ S+++ Y K AR +F M ER+++SWN++IAG
Sbjct: 334 GQ--QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLAD-LQLGRQAHTHVVKHGLRFL 419
QNG EA+ LF L R + P YT ++L A ++L + L L +Q H H +K
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK------ 445
Query: 420 SGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGL 479
SD FV +LID Y + +++ +FE D V+WNAM+ G Q+ G + L L
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 480 FKKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY-------T 532
F M GE+ D T+ V C + +G++ H A +K Y +
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV-------HAYA-IKSGYDLDLWVSS 556
Query: 533 CMVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLAAC 570
++D+ + G + A+ +++P+ PD V W ++++ C
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 204/455 (44%), Gaps = 66/455 (14%)
Query: 164 SVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYGKCGRVSCARRVFDGMRERNIVSWNSL 223
S D +G HA + + + ++ + LI MY KCG ++ ARRVFD M +R++VSWNS+
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 224 ITCYEQNGPA-----SDALEVFVRMMASGIEPDEVTLASVVSACASLAAFKEGLQIHARL 278
+ Y Q+ A +F + + +TL+ ++ C H
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 279 MRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNVVSETSMVSGYAK------- 331
+ L D + ALV++Y K GK+ E + +F+ MP R+VV M+ Y +
Sbjct: 172 CKI-GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 332 ---ASSVKSARL----MFTKMLER------------------------NVVSWNALIAGY 360
+S+ S+ L + ++L R ++ N ++ Y
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 361 TQNGENEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLS 420
+G+ L F + V TF +L + L LG+Q H +K GL +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM- 349
Query: 421 GEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLF 480
+ V NSLI+MY K +F+ M ERD +SWN++I G AQNG EA+ LF
Sbjct: 350 -----LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 481 KKMLLCGEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLK-----DHY--TC 533
++L CG KPD TM VL A S + EG S+SK+ + +K D + T
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASS---LPEGL----SLSKQVHVHAIKINNVSDSFVSTA 457
Query: 534 MVDLLGRAGCLDEAKTLIEAMPMQPDAVIWGSLLA 568
++D R C+ EA+ L E D V W +++A
Sbjct: 458 LIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 112/212 (52%), Gaps = 14/212 (6%)
Query: 290 LGNALVDMYAKCGKLNEARCV-FDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLER 348
L NA+ GK AR + F+ P R +++ +++S Y+K S+ AR +F KM +R
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDR 103
Query: 349 NVVSWNALIAGYTQNGE-----NEEALGLFRLLKRESVCPTHYTFGNLLNACANLADLQL 403
++VSWN+++A Y Q+ E ++A LFR+L+++ V + T +L C + +
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 404 GRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCGSVEDGCRIFETMVERDWVSWNAM 463
H + K GL + D FV +L+++Y+K G V++G +FE M RD V WN M
Sbjct: 164 SESFHGYACKIGL------DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 464 IVGCAQNGYGTEALGLFKKMLLCGEKPDHVTM 495
+ + G+ EA+ L G P+ +T+
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 327/618 (52%), Gaps = 69/618 (11%)
Query: 18 DSSPFAKLLDSCLRSKSVSDTRRVHARIIKSQFASEIFIQNRLIDVYAKCGCLYGARKVF 77
D F+K L +C + + + +++H +++K + + L+D+YAKCG
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCG--------- 190
Query: 78 DKMSNKNVFTWNSIITGLLKWGFIDDASRLFASMPERDQCSWNSMVSGFAQHDRFSEALG 137
I A ++F + R+ W SM++G+ ++D E L
Sbjct: 191 ----------------------EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 138 YFVKMHSENFALSEYSFGSALSACAGSVDFKMGTQVHALLSKSRYSSDVYMGSALIDMYG 197
F +M N +EY++G+ + AC G H L KS + ++L+DMY
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 198 KCGRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLAS 257
KCG +S ARRVF+ ++V W ++I Y NG ++AL +F +M I+P+ VT+AS
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 258 VVSACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIR 317
V+S C + + G +H ++ D + NALV MYAKC + +A+ V
Sbjct: 349 VLSGCGLIENLELGRSVHGLSIKVGIW--DTNVANALVHMYAKCYQNRDAKYV------- 399
Query: 318 NVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLK 377
F E+++V+WN++I+G++QNG EAL LF +
Sbjct: 400 ------------------------FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 378 RESVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYM 437
ESV P T +L +ACA+L L +G H + VK G FL+ S + VG +L+D Y
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG--FLA--SSSVHVGTALLDFYA 491
Query: 438 KCGSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIG 497
KCG + IF+T+ E++ ++W+AMI G + G +L LF++ML +KP+ T
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 498 VLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHYTCMVDLLGRAGCLDEAKTLIEAMPMQ 557
+L AC H G+V EG+KYFSSM K++ P HYTCMVD+L RAG L++A +IE MP+Q
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 558 PDAVIWGSLLAACKVHRNIMLGEYVAKKLLEIEPSNSGPYVLLSNMYAELGRWGEVVRVR 617
PD +G+ L C +H LGE V KK+L++ P ++ YVL+SN+YA GRW + VR
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 618 KLMRKRGVVKQPGCSWIE 635
LM++RG+ K G S +E
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 204/435 (46%), Gaps = 61/435 (14%)
Query: 149 LSEYSFGSALSACAGSVDFKMGT---------QVHALLSKSRYSSDVYMGSALIDMYGKC 199
L+E + GS+L A S F + + Q H +L+ + D+ + + L+ +YG
Sbjct: 30 LTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFF 89
Query: 200 GRVSCARRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTLASVV 259
G AR VFD + E + W ++ CY N + + ++++ +M G D++ + +
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 260 SACASLAAFKEGLQIHARLMRCEKLRNDLVLGNALVDMYAKCGKLNEARCVFDRMPIRNV 319
AC L G +IH +L++ N ++ G L+DMYAKCG++ A VF+ + +RNV
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 320 VSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGENEEALGLFRLLKRE 379
V TSM++GY K + ++F +M E NV+ NE
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-------------NE------------ 242
Query: 380 SVCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKC 439
YT+G L+ AC L+ L G+ H +VK G+ E S V SL+DMY+KC
Sbjct: 243 ------YTYGTLIMACTKLSALHQGKWFHGCLVKSGI-----ELSSCLV-TSLLDMYVKC 290
Query: 440 GSVEDGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499
G + + R+F D V W AMIVG NG EAL LF+KM KP+ VT+ VL
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 500 CACSHAGLVEEGRKYFSSMSKEHGLAPL-----KDHYTCMVDLLGRAGCLDEAKTLIEAM 554
C +E GR HGL+ + +V + + +AK + E M
Sbjct: 351 SGCGLIENLELGRSV-------HGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFE-M 402
Query: 555 PMQPDAVIWGSLLAA 569
+ D V W S+++
Sbjct: 403 ESEKDIVAWNSIISG 417
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 248,962,479
Number of Sequences: 539616
Number of extensions: 9960441
Number of successful extensions: 31379
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 20879
Number of HSP's gapped (non-prelim): 2620
length of query: 705
length of database: 191,569,459
effective HSP length: 125
effective length of query: 580
effective length of database: 124,117,459
effective search space: 71988126220
effective search space used: 71988126220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)