BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005268
(705 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 986 bits (2549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/705 (64%), Positives = 566/705 (80%), Gaps = 4/705 (0%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 60
MIS Y R G SE + CF F L+SGL PD+ TFP VLKACR ++DG KIHC LK GF
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM 182
Query: 61 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 120
WDV+VAASL+H+Y R+ AR LFD+MPVRD GSWNAMISGYCQSGNA EAL + + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 121 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 180
R +MD +TV S+L C + + G+ IH Y +KHGLE LFVSN LI++YA+FG +
Sbjct: 243 R----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 181 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 240
R +VFD+M RD++SWNSII AYE + P+ A F M+ + IQPD LTL+SL SI+
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 241 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISW 300
+QL D R RSV GF +R+GWF+ED+ IGNAVV MYAKLG+++SA AVF LP DVISW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 301 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 360
NT+I+GYAQNG ASEAIE++ +MEE EI NQGT+VS+LPA S GALRQG+K+H R++
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 361 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 420
KN L DVFV T L DMYGKCGR++DA+SLFYQ+PR +SVPWN +I+CHG HG G+KA+
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 421 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 480
F++MLDEGV+PDHITFV+LL+ACSHSGLV EGQ F MMQ ++GI P LKHYGCMVD++
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 481 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYV 540
GRAG L A FI++M ++PDASIWGALL ACR+HGN++LG +AS+ LFEV+ E+VGY+V
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 658
Query: 541 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 600
L+SN+YA+ GKWEGVDE+RS+A +GL+KTPGWSS+EV+NKV++FYTGN+THP YE++Y
Sbjct: 659 LLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYR 718
Query: 601 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFK 660
EL L AK+K +GYVPD FVLQDVE+DEKEHIL SHSERLAIAF +I++P K+ I+IFK
Sbjct: 719 ELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFK 778
Query: 661 NLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
NLRVCGDCH+ TKFIS+ITEREIIVRDSNRFHHFK+G+CSCGDYW
Sbjct: 779 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 262/512 (51%), Gaps = 16/512 (3%)
Query: 37 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGS 96
+ + C NL K +H ++ +V ++A L+++YC G +AR FD + RD +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 97 WNAMISGYCQSGNAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSGLLIHLYI 155
WN MISGY ++GN+ E + L G++ D T S+L C ++ G IH
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 176
Query: 156 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 215
+K G ++++V+ +LI++Y+++ + +A +FD+M RD+ SWN++I+ Y QS + A
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA- 235
Query: 216 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 275
T+ D +T+VSL S + D ++H + ++ G ++ + N ++D+
Sbjct: 236 ---LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDL 291
Query: 276 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 335
YA+ G + VF+ + V+D+ISWN++I Y N AI +FQ M + I P+ T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQPDCLT 350
Query: 336 YVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 394
+S+ S +G +R + + K D+ + +V MY K G +D A ++F +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 395 PRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGLVSEG 453
P + + WN IIS + +G +A+ + M +EG + + T+VS+L ACS +G + +G
Sbjct: 411 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 454 QRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACR 513
+ H + G+ + + D++G+ G L A + +P R ++ W L+
Sbjct: 471 MK-LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHG 528
Query: 514 IHGNMELGAVASDRLFE--VDSENVGYYVLMS 543
HG+ E + + + V +++ + L+S
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 561 bits (1446), Expect = e-159, Method: Compositional matrix adjust.
Identities = 288/708 (40%), Positives = 429/708 (60%), Gaps = 7/708 (0%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
M+ + + L +A+ F + + P Y F +LK C + + GK+IH ++K
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF D+F L +MY + N ARK+FD MP RD SWN +++GY Q+G A AL+++
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
M E + IT+ S+LP + I G IH Y ++ G + + +S L++MYAK
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + A ++FD M+ER+VVSWNS+I AY Q+ +P A F M G++P ++++
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
A L D R +H + G +V + N+++ MY K +++A ++F L + +
Sbjct: 345 HACADLGDLERGRFIHKLSVELG-LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
+SWN +I G+AQNG +A+ F M + P+ TYVS++ A + + IH
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRS-RTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
V+++CL +VFV T LVDMY KCG I A +F + WNA+I +G HG G
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
AL F +M ++P+ +TF+S+++ACSHSGLV G + F+MM+E + I+ + HYG MV
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 537
DL GRAG L A +FI MPV+P +++GA+LGAC+IH N+ A++RLFE++ ++ G
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 538 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 597
Y+VL++NIY WE V +VR +GL+KTPG S +E+ N+V F++G+ HP +K
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 598 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 657
IY L L +K GYVPD + VL VE D KE +L++HSE+LAI+FG++++ + I
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 658 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+ KNLRVC DCHN TK+IS +T REI+VRD RFHHFK+G CSCGDYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 252/489 (51%), Gaps = 6/489 (1%)
Query: 30 DFYTFPP--VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFD 87
+ Y P +L+ C +L + ++I V K G + F L+ ++CR+G + A ++F+
Sbjct: 34 NVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFE 93
Query: 88 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILS 147
+ + + ++ M+ G+ + + +AL MR + V +L VC +
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 148 GLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQ 207
G IH +VK G +LF L NMYAK + A +VFD+M ERD+VSWN+I+A Y Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 208 SNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI 267
+ A +M + ++P +T+VS+ V+ L + +HG+ MR G F V
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG-FDSLVN 272
Query: 268 IGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECN 327
I A+VDMYAK G + +A +F+G+ ++V+SWN++I Y QN EA+ +FQ M +
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-E 331
Query: 328 EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDA 387
+ P + + L A + +G L +G IH ++ L +V V L+ MY KC +D A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 388 MSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHS 447
S+F ++ + V WNA+I +G+ ALN+F QM V+PD T+VS++TA +
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 448 GLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 507
++ ++ H + + ++ +VD++ + G + +A I +M + W A
Sbjct: 452 S-ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNA 509
Query: 508 LLGACRIHG 516
++ HG
Sbjct: 510 MIDGYGTHG 518
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/708 (41%), Positives = 427/708 (60%), Gaps = 5/708 (0%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA---CRNLVDGKKIHCSVLKL 57
+++ + G S ++ F + ++SG+ D YTF V K+ R++ G+++H +LK
Sbjct: 166 LMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF V SL+ Y + + ARK+FD+M RD SWN++I+GY +G A + L +
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+M + G+ +D T+ S+ CA S I G +H VK N L++MY+K
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + A VF +M +R VVS+ S+IA Y + A F M++ GI PD+ T+ ++
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
+ A+ + VH +I D+ + NA++DMYAK G + A VF + VKD+
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
ISWNT+I GY++N A+EA+ +F ++ E +P++ T +LPA + + A +G +IH
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+++N D VA LVDMY KCG + A LF + V W +I+ +G+HG G +
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
A+ F QM G+ D I+FVSLL ACSHSGLV EG R+F++M+ E I+P ++HY C+V
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 537
D+ R G L A+ FI+NMP+ PDA+IWGALL CRIH +++L ++++FE++ EN G
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTG 703
Query: 538 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 597
YYVLM+NIYA KWE V +R RGL+K PG S IE+ +V+IF G+ ++P+ E
Sbjct: 704 YYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEN 763
Query: 598 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 657
I LR + A+M GY P + L D EE EKE L HSE+LA+A GIISS I+
Sbjct: 764 IEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIR 823
Query: 658 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+ KNLRVCGDCH KF+S++T REI++RDSNRFH FKDG CSC +W
Sbjct: 824 VTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 257/492 (52%), Gaps = 10/492 (2%)
Query: 30 DFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF 86
D T VL+ C ++L DGK++ + GF D + + L MY G A ++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 87 DDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNIL 146
D++ + + WN +++ +SG+ ++ + +M GV MD T + + + ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 147 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 206
G +H +I+K G V N+L+ Y K + A +VFD+M ERDV+SWNSII Y
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 207 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 266
+ F M +GI+ DL T+VS+ + A R+VH ++ + ED
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 267 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC 326
N ++DMY+K G ++SA AVF + + V+S+ ++I GYA+ GLA EA+++F+ MEE
Sbjct: 333 FC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE- 390
Query: 327 NEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 386
I+P+ T ++L + L +G ++H + +N L FD+FV+ L+DMY KCG + +
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 387 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPDHITFVSLLTACS 445
A +F ++ + WN II + + ++AL+ F +L+E PD T +L AC+
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 446 HSGLVSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 504
+G+ + ++M+ + H+ + +VD++ + G L +AH ++ + D
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVS 567
Query: 505 WGALLGACRIHG 516
W ++ +HG
Sbjct: 568 WTVMIAGYGMHG 579
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 215/427 (50%), Gaps = 15/427 (3%)
Query: 88 DMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV-SMDPITVASILPVCARSDNIL 146
D V D+ N + +C+SGN A+ +L + G +DP T+ S+L +CA S ++
Sbjct: 58 DRSVTDA---NTQLRRFCESGNLENAVKLLC---VSGKWDIDPRTLCSVLQLCADSKSLK 111
Query: 147 SGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE 206
G + +I +G + + + L MY G ++ A RVFD++ + WN ++
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 207 QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 266
+S D + G F M +G++ D T ++ + L +HGFI++ G F E
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG-FGERN 230
Query: 267 IIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEE 325
+GN++V Y K ++SA VF+ + +DVISWN++I GY NGLA + + VF QM+
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 326 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 385
EI+ T VS+ + + G +H+ +K C + L+DMY KCG +D
Sbjct: 291 GIEIDL--ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 386 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 445
A ++F ++ S V + ++I+ + G +A+ F +M +EG+ PD T ++L C+
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 446 HSGLVSEGQRYFHMMQE-EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 504
L+ EG+R ++E + G + + ++D++ + G + A M V+ D
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVFSEMRVK-DIIS 465
Query: 505 WGALLGA 511
W ++G
Sbjct: 466 WNTIIGG 472
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 543 bits (1400), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/706 (39%), Positives = 428/706 (60%), Gaps = 21/706 (2%)
Query: 19 YQFTLTSGLRPDFYTFPPVLKACRNL------VDGKKIHCSVLKLGFEWDVFVAASLLHM 72
++ L + P +T V+ AC NL + GK++H L+ G E + F+ +L+ M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAM 245
Query: 73 YCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITV 132
Y + G ++ L RD +WN ++S CQ+ +EAL+ L EM LEGV D T+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 133 ASILPVCARSDNILSGLLIHLYIVKHG-LEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 191
+S+LP C+ + + +G +H Y +K+G L+ N FV + L++MY + RVFD M
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 192 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSR 250
+R + WN++IA Y Q+ A F M++ AG+ + T+ + +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 251 SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQN 310
++HGF+++RG D + N ++DMY++LG I+ A +F + +D+++WNT+ITGY +
Sbjct: 426 AIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 311 GLASEAIEVFQMMEECNE----------INPNQGTYVSILPAYSHVGALRQGIKIHARVI 360
+A+ + M+ + PN T ++ILP+ + + AL +G +IHA I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 361 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 420
KN L DV V + LVDMY KCG + + +F Q+P+ + + WN II +G+HG G +A++
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 421 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 480
R M+ +GV+P+ +TF+S+ ACSHSG+V EG R F++M+ ++G++P HY C+VDL
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 481 GRAGHLGMAHNFIQNMPVR-PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 539
GRAG + A+ + MP A W +LLGA RIH N+E+G +A+ L +++ +Y
Sbjct: 665 GRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHY 724
Query: 540 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 599
VL++NIY++ G W+ EVR +++G++K PG S IE ++V F G+ +HP+ EK+
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLS 784
Query: 600 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 659
L L +M+ GYVPD S VL +VEEDEKE +L HSE+LAIAFGI+++ P + I++
Sbjct: 785 GYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVA 844
Query: 660 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KNLRVC DCH TKFIS+I +REII+RD RFH FK+G CSCGDYW
Sbjct: 845 KNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 263/530 (49%), Gaps = 22/530 (4%)
Query: 6 VRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWD 62
VR L EAV + + G++PD Y FP +LKA +L D GK+IH V K G+ D
Sbjct: 73 VRSNLLREAVLTYVDMIVL-GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131
Query: 63 -VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 121
V VA +L+++Y + G K+FD + R+ SWN++IS C AL+ M
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 122 LEGVSMDPITVASILPVCAR---SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 178
E V T+ S++ C+ + ++ G +H Y ++ G E N F+ N L+ MY K G
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG 250
Query: 179 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 238
+ + + RD+V+WN+++++ Q+ + A + M G++PD T+ S+
Sbjct: 251 KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLP 310
Query: 239 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 298
+ L R + +H + ++ G E+ +G+A+VDMY + S VF+G+ + +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 370
Query: 299 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 358
WN +I GY+QN EA+ +F MEE + N T ++PA GA + IH
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 359 VIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 418
V+K L D FV L+DMY + G+ID AM +F ++ V WN +I+ + + A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 419 LNFFRQM--LDEGV---------RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 467
L +M L+ V +P+ IT +++L +C+ +++G+ H + +
Sbjct: 491 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLA 549
Query: 468 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
+ +VD++ + G L M+ +P + + W ++ A +HGN
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 197/419 (47%), Gaps = 11/419 (2%)
Query: 97 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 156
W ++ +S EA+ +M + G+ D ++L A ++ G IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 157 KHGLEFN-LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 215
K G + + V+N L+N+Y K G +VFD++ ER+ VSWNS+I++ A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 216 GFFTTMQQAGIQPDLLTLVSLTSIVAQL---NDCRNSRSVHGFIMRRGWFMEDVIIGNAV 272
F M ++P TLVS+ + + L + VH + +R+G +I N +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTL 242
Query: 273 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 332
V MY KLG + S+ + +D+++WNT+++ QN EA+E + M + P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEPD 301
Query: 333 QGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
+ T S+LPA SH+ LR G ++HA +KN L + FV + LVDMY C ++ +F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 392 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLV 450
+ WNA+I+ + + +AL F M + G+ + T ++ AC SG
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 451 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 509
S + H + G+ ++D++ R G + +A M R D W ++
Sbjct: 422 SR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 300 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 359
W L+ ++ L EA+ + M I P+ + ++L A + + + G +IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 360 IKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKA 418
K D V VA LV++Y KCG +F ++ + V WN++IS + + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 419 LNFFRQMLDEGVRPDHITFVSLLTACSH----SGLVSEGQRYFHMMQEEFGIKPHLKHY- 473
L FR MLDE V P T VS++TACS+ GL+ Q + + ++ K L +
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-----KGELNSFI 238
Query: 474 -GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 511
+V ++G+ G L + + + R D W +L +
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 541 bits (1393), Expect = e-153, Method: Compositional matrix adjust.
Identities = 271/696 (38%), Positives = 419/696 (60%), Gaps = 9/696 (1%)
Query: 14 AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLL 70
++ F ++ L+P+ T+ + A D G+ IH + G + ++ + ++++
Sbjct: 102 SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIV 161
Query: 71 HMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVS-MDP 129
MY +F ARK+FD MP +D+ WN MISGY ++ VE++ + ++ E + +D
Sbjct: 162 KMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDT 221
Query: 130 ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQ 189
T+ ILP A + G+ IH K G + +V I++Y+K G ++ +F +
Sbjct: 222 TTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFRE 281
Query: 190 MMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNS 249
+ D+V++N++I Y + + + F + +G + TLVSL + L
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY-- 339
Query: 250 RSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQ 309
++HG+ ++ F+ + A+ +Y+KL I SA +F+ P K + SWN +I+GY Q
Sbjct: 340 -AIHGYCLKSN-FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 310 NGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVF 369
NGL +AI +F+ M++ +E +PN T IL A + +GAL G +H V ++
Sbjct: 398 NGLTEDAISLFREMQK-SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 370 VATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG 429
V+T L+ MY KCG I +A LF + + + V WN +IS +G+HGQG +ALN F +ML+ G
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 430 VRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMA 489
+ P +TF+ +L ACSH+GLV EG F+ M +G +P +KHY CMVD+ GRAGHL A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 490 HNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANV 549
FI+ M + P +S+W LLGACRIH + L S++LFE+D +NVGY+VL+SNI++
Sbjct: 577 LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSAD 636
Query: 550 GKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKM 609
+ VR A+ R L K PG++ IE+ +F +G+++HP+ ++IY++L L KM
Sbjct: 637 RNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKM 696
Query: 610 KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCH 669
+ GY P+ L DVEE+E+E ++ HSERLAIAFG+I++ P + I+I KNLRVC DCH
Sbjct: 697 REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCH 756
Query: 670 NWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
TK IS+ITER I+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 757 TVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 4/271 (1%)
Query: 252 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 311
H I+ G F D+ + + + LG I A +F + DV +N L+ G++ N
Sbjct: 39 THAQIILHG-FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 312 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 371
++ VF + + ++ PN TY + A S R G IH + + + ++ +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 372 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-V 430
+ +V MY K R++DA +F ++P ++ WN +IS + + +++ FR +++E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 431 RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAH 490
R D T + +L A + + G + H + + G H + L+ + G + M
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQ-IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 491 NFIQNMPVRPDASIWGALLGACRIHGNMELG 521
+ +PD + A++ +G EL
Sbjct: 277 ALFREFR-KPDIVAYNAMIHGYTSNGETELS 306
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/708 (38%), Positives = 426/708 (60%), Gaps = 8/708 (1%)
Query: 2 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 58
+S Y+ G+ S + CF + S + D TF +L +L G+++HC LKLG
Sbjct: 287 LSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 59 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 118
+ + V+ SL++MYC+ AR +FD+M RD SWN++I+G Q+G VEA+ +
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 119 EMRLEGVSMDPITVASILPVCARSDNILS-GLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
++ G+ D T+ S+L + LS +H++ +K + FVS LI+ Y++
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRN 465
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
M+ A +F++ D+V+WN+++A Y QS+D F M + G + D TL ++
Sbjct: 466 RCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
L + VH + ++ G+ + D+ + + ++DMY K G +++A F+ +PV D
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDL-DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
++W T+I+G +NG A VF M + P++ T ++ A S + AL QG +IHA
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+K D FV T LVDMY KCG IDDA LF ++ + WNA++ HG+G +
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
L F+QM G++PD +TF+ +L+ACSHSGLVSE ++ M ++GIKP ++HY C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 537
D GRAG + A N I++M + AS++ LL ACR+ G+ E G + +L E++ +
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 538 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 597
YVL+SN+YA KW+ + R++ + +KK PG+S IEV NK+ IF +R++ + E
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 598 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 657
IY +++++ +K GYVP+ F L DVEE+EKE L HSE+LA+AFG++S+PP +PI+
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 658 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+ KNLRVCGDCHN K+I+++ REI++RD+NRFH FKDGICSCGDYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 242/553 (43%), Gaps = 82/553 (14%)
Query: 43 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 102
+L+ GK H +L + F+ +L+ MY + G AR++FD MP RD SWN++++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 103 GYCQSGNAV-----EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 157
Y QS V +A + +R + V +T++ +L +C S + + H Y K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 158 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 217
GL+ + FV+ L+N+Y KFG ++ +F++M RDVV WN ++ AY + A
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 218 FTTMQQAGIQPDLLTLVSLTSI---------VAQLNDCRNSRSVHGFIMRRGWFME---- 264
+ +G+ P+ +TL L I V + ++ SV I R E
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 265 ------------------------------------DVIIGNAVVDMYAKLG-------- 280
+ +G V M KLG
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 281 --IINSAC---------AVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 329
+IN C VF+ + +D+ISWN++I G AQNGL EA+ +F + C +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-L 412
Query: 330 NPNQGTYVSILPAYSHVG---ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDD 386
P+Q T S+L A S + +L + + +HA I N D FV+T L+D Y + + +
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTALIDAYSRNRCMKE 470
Query: 387 AMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSH 446
A LF + V WNA+++ + G K L F M +G R D T ++ C
Sbjct: 471 AEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 447 SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 506
+++G++ H + G L ++D++ + G + A ++PV PD W
Sbjct: 530 LFAINQGKQ-VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWT 587
Query: 507 ALLGACRIHGNME 519
++ C +G E
Sbjct: 588 TMISGCIENGEEE 600
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 203/420 (48%), Gaps = 6/420 (1%)
Query: 98 NAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK 157
N +S Y SG L +M V D +T +L + D++ G +H +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 158 HGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGF 217
GL+ L VSN+LINMY K A VFD M ERD++SWNS+IA Q+ + A
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 218 FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRN-SRSVHGFIMRRGWFMEDVIIGNAVVDMY 276
F + + G++PD T+ S+ + L + + S+ VH ++ + D + A++D Y
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAY 462
Query: 277 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 336
++ + A +FE D+++WN ++ GY Q+ + +++F +M + E + T
Sbjct: 463 SRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTL 520
Query: 337 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 396
++ + A+ QG ++HA IK+ D++V++ ++DMY KCG + A F +P
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 397 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 456
V W +IS +G+ ++A + F QM GV PD T +L A S + +G R
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG-RQ 639
Query: 457 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 516
H + +VD++ + G + A+ + + + + + W A+L HG
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHG 698
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 174/387 (44%), Gaps = 42/387 (10%)
Query: 142 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 201
S +++ G H I+ F+ NNLI+MY+K G + +A RVFD+M +RD+VSWNSI
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 202 IAAYEQSNDPIT-----AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 256
+AAY QS++ + A F ++Q + +TL + + S S HG+
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 257 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 316
+ G ++ + G A+V++Y K G + +FE +P +DV+ WN ++ Y + G EA
Sbjct: 172 CKIGLDGDEFVAG-ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 317 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 376
I++ +NPN+ T + +L S + +K A
Sbjct: 231 IDLSSAFHSSG-LNPNEIT-LRLLARISGDDSDAGQVKSFANG----------------- 271
Query: 377 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 436
+DA S+ S + N +S + GQ L F M++ V D +T
Sbjct: 272 --------NDASSV------SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 437 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 496
F+ +L ++ GQ+ H M + G+ L +++++ + G A NM
Sbjct: 318 FILMLATAVKVDSLALGQQ-VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 497 PVRPDASIWGALLGACRIHGNMELGAV 523
R D W +++ +G +E+ AV
Sbjct: 377 SER-DLISWNSVIAGIAQNG-LEVEAV 401
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/621 (43%), Positives = 398/621 (64%), Gaps = 9/621 (1%)
Query: 93 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 152
D SWN++I+ +SG++ EAL MR + + + C+ +I SG H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 153 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 212
G + ++FVS+ LI MY+ G + A +VFD++ +R++VSW S+I Y+ + + +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 213 TAHGFFTTM------QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV 266
A F + + D + LVS+ S +++ + S+H F+++RG F V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGV 218
Query: 267 IIGNAVVDMYAKLGIINSACA--VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 324
+GN ++D YAK G A A +F+ + KD +S+N++++ YAQ+G+++EA EVF+ +
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 325 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 384
+ + N T ++L A SH GALR G IH +VI+ L DV V T ++DMY KCGR+
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 385 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTAC 444
+ A F ++ + W A+I+ +G+HG KAL F M+D GVRP++ITFVS+L AC
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 445 SHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASI 504
SH+GL EG R+F+ M+ FG++P L+HYGCMVDL GRAG L A++ IQ M ++PD+ I
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 505 WGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARD 564
W +LL ACRIH N+EL ++ RLFE+DS N GYY+L+S+IYA+ G+W+ V+ VR + ++
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 565 RGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQD 624
RGL K PG+S +E+N +V +F G+ HP+ EKIY+ L L K+ GYV + S V D
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHD 578
Query: 625 VEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREII 684
V+E+EKE L HSE+LAIAFGI+++ P S + + KNLRVC DCHN K IS+I +RE +
Sbjct: 579 VDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFV 638
Query: 685 VRDSNRFHHFKDGICSCGDYW 705
VRD+ RFHHFKDG CSCGDYW
Sbjct: 639 VRDAKRFHHFKDGGCSCGDYW 659
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 232/426 (54%), Gaps = 17/426 (3%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I+ R G +EA+ F S L P +FP +KAC +L D GK+ H
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVF 105
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G++ D+FV+++L+ MY G ARK+FD++P R+ SW +MI GY +GNA++A+ +
Sbjct: 106 GYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 118 DEMRL------EGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 171
++ + + + +D + + S++ C+R IH +++K G + + V N L+
Sbjct: 166 KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLL 225
Query: 172 NMYAKFGM--MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQP 228
+ YAK G + A ++FDQ++++D VS+NSI++ Y QS A F + + +
Sbjct: 226 DAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTF 285
Query: 229 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 288
+ +TL ++ V+ R + +H ++R G +DVI+G +++DMY K G + +A
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 289 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 348
F+ + K+V SW +I GY +G A++A+E+F M + + PN T+VS+L A SH G
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGL 403
Query: 349 LRQGIK-IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAII 406
+G + +A + + + C+VD+ G+ G + A L ++ + S+ W++++
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Query: 407 SCHGIH 412
+ IH
Sbjct: 464 AACRIH 469
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 287/743 (38%), Positives = 430/743 (57%), Gaps = 51/743 (6%)
Query: 14 AVDCFYQFTLTSGLR--PDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAAS 68
A C Y F L L PD YTFP V KAC + G+ H L GF +VFV +
Sbjct: 108 ANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNA 167
Query: 69 LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE-GVSM 127
L+ MY R + ARK+FD+M V D SWN++I Y + G AL++ M E G
Sbjct: 168 LVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRP 227
Query: 128 DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVF 187
D IT+ ++LP CA G +H + V + N+FV N L++MYAK GMM A VF
Sbjct: 228 DNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVF 287
Query: 188 DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ------------------------ 223
M +DVVSWN+++A Y Q A F MQ+
Sbjct: 288 SNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGY 347
Query: 224 -----------AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI------MRRGWFMEDV 266
+GI+P+ +TL+S+ S A + + + +H + +R+ ++
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDEN 407
Query: 267 IIGNAVVDMYAKLGIINSACAVFEGLPVK--DVISWNTLITGYAQNGLASEAIEVF-QMM 323
++ N ++DMYAK +++A A+F+ L K DV++W +I GY+Q+G A++A+E+ +M
Sbjct: 408 MVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
Query: 324 EECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-CFDVFVATCLVDMYGKCG 382
EE + PN T L A + + ALR G +IHA ++N +FV+ CL+DMY KCG
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527
Query: 383 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 442
I DA +F + + V W ++++ +G+HG G++AL F +M G + D +T + +L
Sbjct: 528 SISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 443 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 502
ACSHSG++ +G YF+ M+ FG+ P +HY C+VDL GRAG L A I+ MP+ P
Sbjct: 588 ACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 503 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 562
+W A L CRIHG +ELG A++++ E+ S + G Y L+SN+YAN G+W+ V +RSL
Sbjct: 648 VVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLM 707
Query: 563 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 622
R +G+KK PG S +E F+ G++THP ++IY L + ++K +GYVP+ F L
Sbjct: 708 RHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFAL 767
Query: 623 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 682
DV+++EK+ +L HSE+LA+A+GI+++P + I+I KNLRVCGDCH ++S+I + +
Sbjct: 768 HDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHD 827
Query: 683 IIVRDSNRFHHFKDGICSCGDYW 705
II+RDS+RFHHFK+G CSC YW
Sbjct: 828 IILRDSSRFHHFKNGSCSCKGYW 850
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 256/551 (46%), Gaps = 55/551 (9%)
Query: 18 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 77
+ + +L S P+ PP + C+ + K IH +L G + + + L+ Y G
Sbjct: 17 YIKVSLFSTSAPEIT--PPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVG 73
Query: 78 LANVARKLFDDMPVRDSG--SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 135
+ A L P D+G WN++I Y +G A + L + M + D T +
Sbjct: 74 CLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFV 133
Query: 136 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 195
C ++ G H + G N+FV N L+ MY++ + A +VFD+M DV
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV 193
Query: 196 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 254
VSWNSII +Y + P A F+ M + G +PD +TLV++ A L + +H
Sbjct: 194 VSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHC 253
Query: 255 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 314
F + ++++ +GN +VDMYAK G+++ A VF + VKDV+SWN ++ GY+Q G
Sbjct: 254 FAVTSE-MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 315 EAIEVFQMMEE-----------------------------CNE-----INPNQGTYVSIL 340
+A+ +F+ M+E C + I PN+ T +S+L
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 341 PAYSHVGALRQGIKIHARVI-------KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQ 393
+ VGAL G +IH I KN + V L+DMY KC ++D A ++F
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 394 V-PRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEG--VRPDHITFVSLLTACSHSGL 449
+ P+ V W +I + HG +KAL +M +E RP+ T L AC+
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 450 VSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 508
+ G++ + + ++ + P L C++D++ + G + A NM + + + W +L
Sbjct: 493 LRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT-WTSL 550
Query: 509 LGACRIHGNME 519
+ +HG E
Sbjct: 551 MTGYGMHGYGE 561
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 218/468 (46%), Gaps = 58/468 (12%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I Y + G+ A++ F + T G RPD T VL C +L GK++HC +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
++FV L+ MY + G+ + A +F +M V+D SWNAM++GY Q G +A+ +
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 118 DEMRLEGVSMD-----------------------------------PITVASILPVCARS 142
++M+ E + MD +T+ S+L CA
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 143 DNILSGLLIHLYIVKHGLEFNL-------FVSNNLINMYAKFGMMRHALRVFDQM--MER 193
++ G IH Y +K+ ++ V N LI+MYAK + A +FD + ER
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 194 DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDCRNSRS 251
DVV+W +I Y Q D A + M + Q P+ T+ A L R +
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 252 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 311
+H + +R + + N ++DMYAK G I+ A VF+ + K+ ++W +L+TGY +G
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 312 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 371
EA+ +F M + T + +L A SH G + QG++ R+ F V
Sbjct: 559 YGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT---VFGVSPG 614
Query: 372 ----TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQ 414
CLVD+ G+ GR++ A+ L ++P V W A +SC IHG+
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 179/380 (47%), Gaps = 35/380 (9%)
Query: 2 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL- 57
IS Y + G EA+ Q L+SG++P+ T VL C + L+ GK+IHC +K
Sbjct: 337 ISGYAQRGLGYEALGVCRQM-LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 58 ------GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPV--RDSGSWNAMISGYCQSGN 109
G + V L+ MY + + AR +FD + RD +W MI GY Q G+
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 110 AVEALDILDEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLE-FNLFV 166
A +AL++L EM E P T++ L CA + G IH Y +++ LFV
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 167 SNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGI 226
SN LI+MYAK G + A VFD MM ++ V+W S++ Y A G F M++ G
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 227 QPDLLTLVSLTSIVAQLNDCRNSRSVHGFI--MRRGWFMEDVIIG----NAVVDMYAKLG 280
+ D +TL+ + L C +S + + R + V G +VD+ + G
Sbjct: 576 KLDGVTLLVV------LYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 281 IINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQ-MMEECNEINPNQ-GTYV 337
+N+A + E +P++ + W ++ +G +E+ + E+ E+ N G+Y
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG----KVELGEYAAEKITELASNHDGSYT 685
Query: 338 SILPAYSHVGALRQGIKIHA 357
+ Y++ G + +I +
Sbjct: 686 LLSNLYANAGRWKDVTRIRS 705
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 10/262 (3%)
Query: 272 VVDMYAKLGIINSACAVFEGLPVKD--VISWNTLITGYAQNGLASEAIEVFQMMEECNEI 329
++ Y +G ++ A ++ P D V WN+LI Y NG A++ + +F +M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS-W 123
Query: 330 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 389
P+ T+ + A + ++R G HA + +VFV LV MY +C + DA
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 390 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSG 448
+F ++ V WN+II + G+ AL F +M +E G RPD+IT V++L C+ G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 449 LVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 508
S G++ H + ++ C+VD++ + G + A+ NM V+ D W A+
Sbjct: 244 THSLGKQ-LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAM 301
Query: 509 LGACRIHGNMELGAVASDRLFE 530
+ G E RLFE
Sbjct: 302 VAGYSQIGRFEDAV----RLFE 319
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/684 (38%), Positives = 428/684 (62%), Gaps = 8/684 (1%)
Query: 25 SGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARK 84
SG+ D + + ++ + + K+IH +L LG ++ F+ L+H FG AR+
Sbjct: 16 SGIHSDSF-YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 85 LFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 144
+FDD+P WNA+I GY ++ + +AL + M+L VS D T +L C+ +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 145 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFD--QMMERDVVSWNSII 202
+ G +H + + G + ++FV N LI +YAK + A VF+ + ER +VSW +I+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 203 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 262
+AY Q+ +P+ A F+ M++ ++PD + LVS+ + L D + RS+H +++ G
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 263 ME-DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 321
+E D++I ++ MYAK G + +A +F+ + ++I WN +I+GYA+NG A EAI++F
Sbjct: 255 IEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 322 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 381
M ++ P+ + S + A + VG+L Q ++ V ++ DVF+++ L+DM+ KC
Sbjct: 313 EMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 382 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 441
G ++ A +F + V W+A+I +G+HG+ +A++ +R M GV P+ +TF+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 442 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 501
AC+HSG+V EG +F+ M + I P +HY C++DL GRAGHL A+ I+ MPV+P
Sbjct: 432 MACNHSGMVREGWWFFNRMADH-KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 502 ASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSL 561
++WGALL AC+ H ++ELG A+ +LF +D N G+YV +SN+YA W+ V EVR
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 562 ARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFV 621
+++GL K G S +EV +++ F G+++HP+YE+I ++ + +++K G+V +K
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Query: 622 LQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITER 681
L D+ ++E E L SHSER+AIA+G+IS+P +P++I KNLR C +CH TK IS++ +R
Sbjct: 611 LHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDR 670
Query: 682 EIIVRDSNRFHHFKDGICSCGDYW 705
EI+VRD+NRFHHFKDG+CSCGDYW
Sbjct: 671 EIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 5/208 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL 57
MIS Y + G EA+D F++ + +RPD + + AC +L + ++ V +
Sbjct: 294 MISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
+ DVF++++L+ M+ + G AR +FD RD W+AMI GY G A EA+ +
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
M GV + +T +L C S + G + H + +I++ +
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 178 GMMRHALRVFDQM-MERDVVSWNSIIAA 204
G + A V M ++ V W ++++A
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/708 (39%), Positives = 414/708 (58%), Gaps = 12/708 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
++ Y + G EA+ +++ G++PD YTFP VL+ C + D GK++H V++
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G+E D+ V +L+ MY + G AR LFD MP RD SWNAMISGY ++G E L++
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 118 DEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 175
MR G+S+DP +T+ S++ C + G IH Y++ G ++ V N+L MY
Sbjct: 286 FAMR--GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 176 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 235
G R A ++F +M +D+VSW ++I+ YE + P A + M Q ++PD +T+ +
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA 403
Query: 236 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 295
+ S A L D +H ++ + VI+ N +++MY+K I+ A +F +P K
Sbjct: 404 VLSACATLGDLDTGVELHKLAIK-ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 296 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 355
+VISW ++I G N EA+ + M+ + PN T + L A + +GAL G +I
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAACARIGALMCGKEI 520
Query: 356 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 415
HA V++ + D F+ L+DMY +CGR++ A S F + WN +++ + GQG
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQG 579
Query: 416 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 475
+ F +M+ VRPD ITF+SLL CS S +V +G YF M E++G+ P+LKHY C
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYAC 638
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 535
+VDL GRAG L AH FIQ MPV PD ++WGALL ACRIH ++LG +++ +FE+D ++
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKS 698
Query: 536 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 595
VGYY+L+ N+YA+ GKW V +VR + ++ GL G S +EV KV F + ++ HP+
Sbjct: 699 VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQT 758
Query: 596 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 655
++I L KM +G D E ++ I HSER AIAFG+I++ P P
Sbjct: 759 KEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMP 818
Query: 656 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 703
I + KNL +C +CH+ KFIS+ REI VRD+ FHHFKDG CSCGD
Sbjct: 819 IWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 261/502 (51%), Gaps = 12/502 (2%)
Query: 34 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 90
F +++ C R +G K++ L V + + L M+ RFG A +F M
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 91 VRDSGSWNAMISGYCQSGNAVEALDILDEMR-LEGVSMDPITVASILPVCARSDNILSGL 149
R+ SWN ++ GY + G EA+ + M + GV D T +L C ++ G
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 150 LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 209
+H+++V++G E ++ V N LI MY K G ++ A +FD+M RD++SWN++I+ Y ++
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 210 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 269
F M+ + PDL+TL S+ S L D R R +H +++ G F D+ +
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG-FAVDISVC 335
Query: 270 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 329
N++ MY G A +F + KD++SW T+I+GY N L +AI+ ++MM++ + +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ-DSV 394
Query: 330 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 389
P++ T ++L A + +G L G+++H IK L V VA L++MY KC ID A+
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 390 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGL 449
+F+ +PR + + W +II+ ++ + +AL F RQM ++P+ IT + L AC+ G
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGA 513
Query: 450 VSEGQR-YFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 508
+ G+ + H+++ G+ L + ++D++ R G + A + Q + D + W L
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRCGRMNTA--WSQFNSQKKDVTSWNIL 569
Query: 509 LGACRIHGNMELGAVASDRLFE 530
L G + DR+ +
Sbjct: 570 LTGYSERGQGSMVVELFDRMVK 591
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 206/420 (49%), Gaps = 13/420 (3%)
Query: 101 ISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 160
+ G C +G EA+ +L+ M+ V++D +++ +C G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 161 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTT 220
+ + N + M+ +FG + A VF +M ER++ SWN ++ Y + A +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 221 MQQ-AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL 279
M G++PD+ T + + D + VH ++R G+ + D+ + NA++ MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYEL-DIDVVNALITMYVKC 244
Query: 280 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 339
G + SA +F+ +P +D+ISWN +I+GY +NG+ E +E+F M + ++P+ T S+
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS-VDPDLMTLTSV 303
Query: 340 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 399
+ A +G R G IHA VI D+ V L MY G +A LF ++ R
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 400 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 459
V W +IS + + DKA++ +R M + V+PD IT ++L+AC+ G + G
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL--- 420
Query: 460 MQEEFGIKPHLKHY----GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIH 515
+ IK L Y +++++ + + A + N+P R + W +++ R++
Sbjct: 421 --HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 306 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 365
G NG EA+++ M+E + ++ +V+++ A +G K+++ + +
Sbjct: 68 GLCANGKLEEAMKLLNSMQEL-RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 366 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQM 425
V + + M+ + G + DA +F ++ + WN ++ + G D+A+ + +M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 426 L-DEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 484
L GV+PD TF +L C ++ G+ H+ +G + + ++ ++ + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 485 HLGMAHNFIQNMPVRPDASIWGALL------GACRIHGNMEL 520
+ A MP R D W A++ G C H +EL
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMC--HEGLEL 284
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 267/710 (37%), Positives = 406/710 (57%), Gaps = 13/710 (1%)
Query: 5 YVRCGRLSEAVDCFYQFTLTSGLR-PDFYTFPPVLKACRNLVDGK---KIHCSVLKLGFE 60
Y R EA F Q +S PD TF +L C + V ++H +KLGF+
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 61 WDVFVAAS--LLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 118
+ F+ S LL YC ++A LF+++P +DS ++N +I+GY + G E++ +
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 119 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 178
+MR G T + +L + G +H V G + V N +++ Y+K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 179 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 238
+ +FD+M E D VS+N +I++Y Q++ + FF MQ G ++ S
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 239 IVAQLNDCRNSRSVHGFIMRRGWFMEDVI--IGNAVVDMYAKLGIINSACAVFEGLPVKD 296
I A L+ + R +H + D I +GN++VDMYAK + A +F+ LP +
Sbjct: 360 IAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT 416
Query: 297 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 356
+SW LI+GY Q GL +++F M N + +Q T+ ++L A + +L G ++H
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLH 475
Query: 357 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 416
A +I++ +VF + LVDMY KCG I DA+ +F ++P ++V WNA+IS H +G G+
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 417 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 476
A+ F +M++ G++PD ++ + +LTACSH G V +G YF M +GI P KHY CM
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 477 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDS-EN 535
+DL GR G A + MP PD +W ++L ACRIH N L A+++LF ++ +
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 536 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 595
YV MSNIYA G+WE V +V+ R+RG+KK P +S +EVN+K+ +F + ++THP
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 596 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 655
++I ++ LTA+++ GY PD S V+QDV+E K L HSERLA+AF +IS+P P
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCP 775
Query: 656 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
I + KNLR C DCH K IS+I +REI VRD++RFHHF +G+CSCGDYW
Sbjct: 776 IVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 250/528 (47%), Gaps = 49/528 (9%)
Query: 43 NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMIS 102
+D +++ ++K GF+ D + ++ R G + ARK++D+MP +++ S N MIS
Sbjct: 28 TFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMIS 87
Query: 103 GYCQSGNAVEALDILDEM--------------------------------RLEGVSM-DP 129
G+ ++G+ A D+ D M R ++ D
Sbjct: 88 GHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH 147
Query: 130 ITVASILPVCARSDNILSGLL--IHLYIVKHGLEFNLF--VSNNLINMYAKFGMMRHALR 185
+T ++LP C +D + + +H + VK G + N F VSN L+ Y + + A
Sbjct: 148 VTFTTLLPGC--NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 186 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 245
+F+++ E+D V++N++I YE+ + F M+Q+G QP T + V L+D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 246 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 305
+ +H + G F D +GN ++D Y+K + +F+ +P D +S+N +I+
Sbjct: 266 FALGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 306 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 365
Y+Q ++ F+ M +C + + ++L +++ +L+ G ++H + +
Sbjct: 325 SYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 366 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCH---GIHGQGDKALNFF 422
+ V LVDMY KC ++A +F +P+ ++V W A+IS + G+HG G L F
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLF 440
Query: 423 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 482
+M +R D TF ++L A + + G++ + ++ G +VD++ +
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAK 499
Query: 483 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 530
G + A + MP R +A W AL+ A +G+ E A ++ E
Sbjct: 500 CGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIE 546
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/740 (37%), Positives = 434/740 (58%), Gaps = 37/740 (5%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
+I Y G +EA+ F + + SG+ PD YTFP L AC R +G +IH ++K+
Sbjct: 105 LIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G+ D+FV SL+H Y G + ARK+FD+M R+ SW +MI GY + A +A+D+
Sbjct: 164 GYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 118 DEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 176
M R E V+ + +T+ ++ CA+ +++ +G ++ +I G+E N + + L++MY K
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 177 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 236
+ A R+FD+ ++ N++ + Y + A G F M +G++PD ++++S
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSA 343
Query: 237 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKL----------------- 279
S +QL + +S HG+++R G+ D I NA++DMY K
Sbjct: 344 ISSCSQLRNILWGKSCHGYVLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 280 --------------GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 325
G +++A FE +P K+++SWNT+I+G Q L EAIEVF M+
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 326 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 385
+N + T +SI A H+GAL I+ + KN + DV + T LVDM+ +CG +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 386 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 445
AMS+F + W A I + G ++A+ F M+++G++PD + FV LTACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 446 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 505
H GLV +G+ F+ M + G+ P HYGCMVDL GRAG L A I++MP+ P+ IW
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 506 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 565
+LL ACR+ GN+E+ A A++++ + E G YVL+SN+YA+ G+W + +VR +++
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 566 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 625
GL+K PG SSI++ K F +G+ +HP+ I L ++ + LG+VPD S VL DV
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 626 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 685
+E EK +L+ HSE+LA+A+G+ISS + I+I KNLRVC DCH++ KF S++ REII+
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 686 RDSNRFHHFKDGICSCGDYW 705
RD+NRFH+ + G CSCGD+W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 246/508 (48%), Gaps = 41/508 (8%)
Query: 35 PPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA---NVARKLFDDMPV 91
P LK C+ + + K H S+ K G + DV L+ C G + A+++F++
Sbjct: 36 PSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 92 RDSG-SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 150
+ +N++I GY SG EA+ + M G+S D T L CA+S +G+
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 151 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 210
IH IVK G +LFV N+L++ YA+ G + A +VFD+M ER+VVSW S+I Y + +
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 211 PITAHG-FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 269
A FF ++ + P+ +T+V + S A+L D V+ FI G + D+++
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV- 274
Query: 270 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 329
+A+VDMY K I+ A +F+ ++ N + + Y + GL EA+ VF +M + +
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG-V 333
Query: 330 NPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMS 389
P++ + +S + + S + + G H V++N + L+DMY KC R D A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 390 LFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLD---------------------- 427
+F ++ + V WN+I++ + +G+ D A F M +
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 428 ----------EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
EGV D +T +S+ +AC H G + + ++ + E+ GI+ ++ +V
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI-EKNGIQLDVRLGTTLV 512
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIW 505
D+F R G A + ++ R D S W
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNR-DVSAW 539
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/711 (38%), Positives = 421/711 (59%), Gaps = 13/711 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKA-CRNLVDGK--KIHCSVLKL 57
+IS Y R E + F + G +P+ +TF L V G+ ++H V+K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + + V+ SL+++Y + G AR LFD V+ +WN+MISGY +G +EAL +
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
MRL V + + AS++ +CA + +H +VK+G F+ + L+ Y+K
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 178 GMMRHALRVFDQM-MERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 236
M ALR+F ++ +VVSW ++I+ + Q++ A F+ M++ G++P+ T
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY--- 400
Query: 237 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 296
S++ + VH +++ + +G A++D Y KLG + A VF G+ KD
Sbjct: 401 -SVILTALPVISPSEVHAQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 297 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA-LRQGIKI 355
+++W+ ++ GYAQ G AI++F + + I PN+ T+ SIL + A + QG +
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGG-IKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 356 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 415
H IK+ L + V++ L+ MY K G I+ A +F + V WN++IS + HGQ
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 416 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 475
KAL+ F++M V+ D +TF+ + AC+H+GLV EG++YF +M + I P +H C
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 637
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 535
MVDL+ RAG L A I+NMP ++IW +L ACR+H ELG +A++++ + E+
Sbjct: 638 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 697
Query: 536 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 595
YVL+SN+YA G W+ +VR L +R +KK PG+S IEV NK F G+R+HP
Sbjct: 698 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 757
Query: 596 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 655
++IY +L +L+ ++K LGY PD S+VLQD++++ KE +L HSERLAIAFG+I++P SP
Sbjct: 758 DQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSP 817
Query: 656 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHF-KDGICSCGDYW 705
+ I KNLRVCGDCH K I++I EREI+VRDSNRFHHF DG+CSCGD+W
Sbjct: 818 LLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 261/522 (50%), Gaps = 22/522 (4%)
Query: 5 YVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEW 61
+ R GR EA F G+ D F VLK L D G+++HC +K GF
Sbjct: 68 FSRDGRTQEAKRLFLNIHRL-GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD 126
Query: 62 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 121
DV V SL+ Y + RK+FD+M R+ +W +ISGY ++ E L + M+
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 122 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 181
EG + T A+ L V A GL +H +VK+GL+ + VSN+LIN+Y K G +R
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 182 HALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 241
A +FD+ + VV+WNS+I+ Y + + A G F +M+ ++ + S+ + A
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCA 306
Query: 242 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP-VKDVISW 300
L + R + +H +++ G F+ D I A++ Y+K + A +F+ + V +V+SW
Sbjct: 307 NLKELRFTEQLHCSVVKYG-FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 301 NTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVI 360
+I+G+ QN EA+++F M+ + PN+ TY IL A + ++HA+V+
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKR-KGVRPNEFTYSVILTALPVISP----SEVHAQVV 420
Query: 361 KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALN 420
K V T L+D Y K G++++A +F + V W+A+++ + G+ + A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 421 FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQ-RYFHMMQEEFGIKPHLKHYGC---- 475
F ++ G++P+ TF S+L C+ + S GQ + FH F IK L C
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQFH----GFAIKSRLDSSLCVSSA 535
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
++ ++ + G++ A + + D W +++ HG
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQ 576
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 211/425 (49%), Gaps = 21/425 (4%)
Query: 20 QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 79
+FT T P F P + N V +I+C F S +Y
Sbjct: 2 RFTTTIWRPPSLENFKPKFRIYANGVAQVRIYC-----------FGTVSSSRLYN----- 45
Query: 80 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVC 139
A LFD P RD S+ +++ G+ + G EA + + G+ MD +S+L V
Sbjct: 46 --AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 140 ARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 199
A + L G +H +K G ++ V +L++ Y K + +VFD+M ER+VV+W
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 200 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 259
++I+ Y +++ F MQ G QP+ T + ++A+ VH +++
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 260 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 319
G + + + N+++++Y K G + A +F+ VK V++WN++I+GYA NGL EA+ +
Sbjct: 224 G-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 320 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 379
F M N + ++ ++ S++ +++ LR ++H V+K FD + T L+ Y
Sbjct: 283 FYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 380 KCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFV 438
KC + DA+ LF ++ + V W A+IS + ++A++ F +M +GVRP+ T+
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 439 SLLTA 443
+LTA
Sbjct: 402 VILTA 406
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 269/708 (37%), Positives = 401/708 (56%), Gaps = 6/708 (0%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL 57
+I+ +CG +A++ F + L GL PD T ++ AC L G+++H KL
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF + + +LL++Y + A F + V + WN M+ Y + + I
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+M++E + + T SIL C R ++ G IH I+K + N +V + LI+MYAK
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + A + + +DVVSW ++IA Y Q N A F M GI+ D + L +
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
S A L + + +H G F D+ NA+V +Y++ G I + FE D
Sbjct: 599 SACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
I+WN L++G+ Q+G EA+ VF M I+ N T+ S + A S ++QG ++HA
Sbjct: 658 IAWNALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+ K + V L+ MY KCG I DA F +V + V WNAII+ + HG G +
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
AL+ F QM+ VRP+H+T V +L+ACSH GLV +G YF M E+G+ P +HY C+V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 537
D+ RAG L A FIQ MP++PDA +W LL AC +H NME+G A+ L E++ E+
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSA 896
Query: 538 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 597
YVL+SN+YA KW+ D R +++G+KK PG S IEV N + FY G++ HP ++
Sbjct: 897 TYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADE 956
Query: 598 IYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQ 657
I++ ++LT + +GYV D +L +++ ++K+ I+ HSE+LAI+FG++S P PI
Sbjct: 957 IHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPIN 1016
Query: 658 IFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+ KNLRVC DCH W KF+S+++ REIIVRD+ RFHHF+ G CSC DYW
Sbjct: 1017 VMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 248/503 (49%), Gaps = 12/503 (2%)
Query: 23 LTSGLRPDFYTFPPVLKACR------NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRF 76
++ + P+ TF VL+ACR ++V+ +IH +L G V L+ +Y R
Sbjct: 178 VSENVTPNEGTFSGVLEACRGGSVAFDVVE--QIHARILYQGLRDSTVVCNPLIDLYSRN 235
Query: 77 GLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 136
G ++AR++FD + ++D SW AMISG ++ EA+ + +M + G+ P +S+L
Sbjct: 236 GFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 137 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 196
C + +++ G +H ++K G + +V N L+++Y G + A +F M +RD V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 197 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 256
++N++I Q A F M G++PD TL SL + + +H +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 257 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 316
+ G+ + I G A++++YAK I +A F V++V+ WN ++ Y +
Sbjct: 416 TKLGFASNNKIEG-ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 317 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVD 376
+F+ M + EI PNQ TY SIL +G L G +IH+++IK + +V + L+D
Sbjct: 475 FRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 377 MYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHIT 436
MY K G++D A + + V W +I+ + + DKAL FRQMLD G+R D +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 437 FVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNM 496
+ ++AC+ + EGQ+ H G L +V L+ R G + ++ +
Sbjct: 594 LTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 497 PVRPDASIWGALLGACRIHGNME 519
D W AL+ + GN E
Sbjct: 653 EA-GDNIAWNALVSGFQQSGNNE 674
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 255/514 (49%), Gaps = 10/514 (1%)
Query: 26 GLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 82
G+ P Y F VL AC+ +L G+++H VLKLGF D +V +L+ +Y G A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 83 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 142
+F +M RD+ ++N +I+G Q G +A+++ M L+G+ D T+AS++ C+
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 143 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 202
+ G +H Y K G N + L+N+YAK + AL F + +VV WN ++
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 203 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 262
AY +D + F MQ I P+ T S+ +L D +H I++ F
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-F 521
Query: 263 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 322
+ + + ++DMYAKLG +++A + KDV+SW T+I GY Q +A+ F+
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 323 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 382
M + I ++ + + A + + AL++G +IHA+ + D+ LV +Y +CG
Sbjct: 582 MLD-RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 383 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 442
+I+++ F Q ++ WNA++S G ++AL F +M EG+ ++ TF S +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 443 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 502
A S + + +G++ H + + G + ++ ++ + G + A + + +
Sbjct: 701 AASETANMKQGKQ-VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 503 SIWGALLGACRIHGNMELGAVASDRLFEVDSENV 536
S W A++ A HG G+ A D ++ NV
Sbjct: 760 S-WNAIINAYSKHG---FGSEALDSFDQMIHSNV 789
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 233/477 (48%), Gaps = 16/477 (3%)
Query: 26 GLRPDFYTFPPVLKACR----NLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV 81
G+RP+ T +L+ C +L +G+K+H +LKLG + + ++ L Y G
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 82 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 141
A K+FD+MP R +WN MI E + M E V+ + T + +L C R
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-R 197
Query: 142 SDNILSGLL--IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWN 199
++ ++ IH I+ GL + V N LI++Y++ G + A RVFD + +D SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 200 SIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRR 259
++I+ ++ A F M GI P S+ S ++ +HG +++
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 260 GWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEV 319
G F D + NA+V +Y LG + SA +F + +D +++NTLI G +Q G +A+E+
Sbjct: 318 G-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 320 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 379
F+ M + + P+ T S++ A S G L +G ++HA K + + L+++Y
Sbjct: 377 FKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 380 KCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVS 439
KC I+ A+ F + + V WN ++ +G+ + FRQM E + P+ T+ S
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 440 LLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYGC--MVDLFGRAGHLGMAHNFI 493
+L C G + G++ + +++ F L Y C ++D++ + G L A + +
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDIL 548
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust.
Identities = 287/784 (36%), Positives = 424/784 (54%), Gaps = 108/784 (13%)
Query: 29 PDFYTFPPVLKACRNLVD-----------GKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 77
P + +L+ C NL+ + +HC V+K G + V++ +L+++Y + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 78 LANVARKLFDDMPVR-------------------------------DSGSWNAMISGYCQ 106
A ARKLFD+MP+R DS SW MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 107 SGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFV 166
G +A+ ++ +M EG+ T+ ++L A + + +G +H +IVK GL N+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 167 SNNLINMYAK-------------------------------FGMMRHALRVFDQMMERDV 195
SN+L+NMYAK G M A+ F+QM ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 196 VSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 254
V+WNS+I+ + Q + A F+ M + + + PD TL S+ S A L + +H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 255 FIMRRGWFMEDVIIG--------------------------------NAVVDMYAKLGII 282
I+ G+ + +++ A++D Y KLG +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 283 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 342
N A +F L +DV++W +I GY Q+G EAI +F+ M + PN T ++L
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSV 422
Query: 343 YSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 401
S + +L G +IH +K+ + V V+ L+ MY K G I A F + +V
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 402 WNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQ 461
W ++I HG ++AL F ML EG+RPDHIT+V + +AC+H+GLV++G++YF MM+
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 462 EEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELG 521
+ I P L HY CMVDLFGRAG L A FI+ MP+ PD WG+LL ACR+H N++LG
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 522 AVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNK 581
VA++RL ++ EN G Y ++N+Y+ GKWE ++R +D +KK G+S IEV +K
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHK 662
Query: 582 VDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERL 641
V +F + THP+ +IY ++ + ++K +GYVPD + VL D+EE+ KE IL HSE+L
Sbjct: 663 VHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKL 722
Query: 642 AIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSC 701
AIAFG+IS+P K+ ++I KNLRVC DCH KFIS++ REIIVRD+ RFHHFKDG CSC
Sbjct: 723 AIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSC 782
Query: 702 GDYW 705
DYW
Sbjct: 783 RDYW 786
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 175/396 (44%), Gaps = 46/396 (11%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
MIS + + G A+D F + S L PD +T VL AC NL GK+IH ++
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFD-----DMPV--------------------- 91
GF+ V +L+ MY R G AR+L + D+ +
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 92 -------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDN 144
RD +W AMI GY Q G+ EA+++ M G + T+A++L V + +
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 145 ILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM-ERDVVSWNSIIA 203
+ G IH VK G +++ VSN LI MYAK G + A R FD + ERD VSW S+I
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 204 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 263
A Q A F TM G++PD +T V + S R + +
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 264 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITG---YAQNGLASEAIEV 319
+ +VD++ + G++ A E +P++ DV++W +L++ + L A E
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 320 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 355
++E N G Y ++ YS G + KI
Sbjct: 609 LLLLEP-----ENSGAYSALANLYSACGKWEEAAKI 639
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/710 (36%), Positives = 431/710 (60%), Gaps = 9/710 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
++S Y G+ E ++ F + +T G P+ YT L AC GK+IH SVLK
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMT-GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313
Query: 58 G-FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDI 116
+++V +L+ MY R G A ++ M D +WN++I GY Q+ EAL+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 117 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAK 176
+M G D +++ SI+ R N+L+G+ +H Y++KHG + NL V N LI+MY+K
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 177 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 236
+ + R F +M ++D++SW ++IA Y Q++ + A F + + ++ D + L S+
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 237 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKD 296
+ L + +H I+R+G D +I N +VD+Y K + A VFE + KD
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 297 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 356
V+SW ++I+ A NG SEA+E+F+ M E ++ + + IL A + + AL +G +IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKGREIH 610
Query: 357 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGD 416
+++ C + +A +VDMY CG + A ++F ++ R + + ++I+ +G+HG G
Sbjct: 611 CYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 670
Query: 417 KALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 476
A+ F +M E V PDHI+F++LL ACSH+GL+ EG+ + +M+ E+ ++P +HY C+
Sbjct: 671 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 730
Query: 477 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 536
VD+ GRA + A F++ M P A +W ALL ACR H E+G +A+ RL E++ +N
Sbjct: 731 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 790
Query: 537 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 596
G VL+SN++A G+W V++VR+ + G++K PG S IE++ KV F +++HP+ +
Sbjct: 791 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESK 850
Query: 597 KIYDELRNLTAKM-KSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSP 655
+IY++L +T K+ + +GYV D FVL +V+E EK +L HSER+AIA+G++ +P ++
Sbjct: 851 EIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRAC 910
Query: 656 IQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
++I KNLRVC DCH + K +S++ R+I++RD+NRFHHF+ G+CSCGD W
Sbjct: 911 LRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 279/542 (51%), Gaps = 16/542 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
MI YV G + A+ ++ + G+ +FP +LKAC L D G ++H ++KL
Sbjct: 153 MIGAYVSNGEPASALALYWNMRV-EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQSGNAVEALDI 116
G+ F+ +L+ MY + + AR+LFD + D+ WN+++S Y SG ++E L++
Sbjct: 212 GYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLEL 271
Query: 117 LDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN-LFVSNNLINMYA 175
EM + G + + T+ S L C G IH ++K + L+V N LI MY
Sbjct: 272 FREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 176 KFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVS 235
+ G M A R+ QM DVV+WNS+I Y Q+ A FF+ M AG + D +++ S
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 236 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 295
+ + +L++ +H ++++ GW ++ +GN ++DMY+K + F + K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 296 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 355
D+ISW T+I GYAQN EA+E+F+ + + + ++ SIL A S + ++ +I
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAK-KRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 356 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 415
H +++ L D + LVD+YGKC + A +F + V W ++IS ++G
Sbjct: 510 HCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 416 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQR-YFHMMQEEFGIKPHLKHYG 474
+A+ FR+M++ G+ D + + +L+A + +++G+ + +++++ F ++ +
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--V 626
Query: 475 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSE 534
+VD++ G L A + R + +++ A +HG G A + ++ E
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHG---CGKAAVELFDKMRHE 682
Query: 535 NV 536
NV
Sbjct: 683 NV 684
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 259/517 (50%), Gaps = 19/517 (3%)
Query: 9 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL--GFEWDV 63
G L+EA F + ++ P F VL+ C R + G+++H + K FE D
Sbjct: 62 GVLTEA---FQRLDVSENNSP-VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD- 116
Query: 64 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 123
F+A L+ MY + G + A K+FD+MP R + +WN MI Y +G AL + MR+E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 124 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 183
GV + + ++L CA+ +I SG +H +VK G F+ N L++MYAK + A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 184 LRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQ 242
R+FD E+ D V WNSI+++Y S + F M G P+ T+VS +
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 243 LNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNT 302
+ + + +H +++ ++ + NA++ MY + G + A + + DV++WN+
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 303 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 362
LI GY QN + EA+E F M ++ + SI+ A + L G+++HA VIK+
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 363 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 422
++ V L+DMY KC F ++ + W +I+ + + +AL F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 423 RQMLDEGVRPDHITFVSLLTACS--HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLF 480
R + + + D + S+L A S S L+ + + + H++++ + +++ +VD++
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVK-EIHCHILRKGL-LDTVIQNE--LVDVY 531
Query: 481 GRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
G+ ++G A +++ + D W +++ + ++GN
Sbjct: 532 GKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 264/686 (38%), Positives = 395/686 (57%), Gaps = 14/686 (2%)
Query: 29 PDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKL 85
PD T VL C R + GK +H +KL + ++ + +L+ MY + G A+ +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 86 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRL--EGVSMDPITVASILPVCARSD 143
F ++ SWN M+ G+ G+ D+L +M E V D +T+ + +PVC
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 144 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 203
+ S +H Y +K +N V+N + YAK G + +A RVF + + V SWN++I
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 204 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM 263
+ QSNDP + M+ +G+ PD T+ SL S ++L R + VHGFI+R W
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLE 528
Query: 264 EDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMM 323
D+ + +V+ +Y G + + A+F+ + K ++SWNT+ITGY QNG A+ VF+ M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 324 EECNEINPNQGTYVSILPAY---SHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 380
+ Q +S++P + S + +LR G + HA +K+ L D F+A L+DMY K
Sbjct: 589 V----LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 381 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 440
G I + +F + S+ WNA+I +GIHG +A+ F +M G PD +TF+ +
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 441 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI-QNMPVR 499
LTAC+HSGL+ EG RY M+ FG+KP+LKHY C++D+ GRAG L A + + M
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 500 PDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVR 559
D IW +LL +CRIH N+E+G + +LFE++ E YVL+SN+YA +GKWE V +VR
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 560 SLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKS 619
+ L+K G S IE+N KV F G R +E+I L K+ +GY PD
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 620 FVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQIT 679
V D+ E+EK L HSE+LA+ +G+I + + I+++KNLR+C DCHN K IS++
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 680 EREIIVRDSNRFHHFKDGICSCGDYW 705
EREI+VRD+ RFHHFK+G+CSCGDYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 277/533 (51%), Gaps = 29/533 (5%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+IS Y R E ++ F + T+ L PD +T+P V+KAC + D G +H V+K
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G DVFV +L+ Y G A +LFD MP R+ SWN+MI + +G + E+ +L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 118 DEMRLE---GVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINM 173
EM E G M D T+ ++LPVCAR I G +H + VK L+ L ++N L++M
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 174 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ--AG---IQP 228
Y+K G + +A +F ++VVSWN+++ + D HG F ++Q AG ++
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVLRQMLAGGEDVKA 393
Query: 229 DLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAV 288
D +T+++ + + + + +H + +++ F+ + ++ NA V YAK G ++ A V
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQE-FVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 289 FEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 348
F G+ K V SWN LI G+AQ+ +++ M + + + P+ T S+L A S + +
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKS 511
Query: 349 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISC 408
LR G ++H +I+N L D+FV ++ +Y CG + +LF + S V WN +I+
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 409 HGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS-----HSGLVSEGQRYFHMMQEE 463
+ +G D+AL FRQM+ G++ I+ + + ACS G + H+++++
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD 631
Query: 464 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 516
I L +D++ + G + + + + AS W A++ IHG
Sbjct: 632 AFIACSL------IDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 207/408 (50%), Gaps = 12/408 (2%)
Query: 47 GKKIHCSVL-KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 105
G+KIH V D + ++ MY G + +R +FD + ++ WNA+IS Y
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 106 QSGNAVEALDILDEM-RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 164
++ E L+ EM + D T ++ CA ++ GL +H +VK GL ++
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 165 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF---TTM 221
FV N L++ Y G + AL++FD M ER++VSWNS+I + S++ + F M
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF--SDNGFSEESFLLLGEMM 280
Query: 222 QQAG---IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAK 278
++ G PD+ TLV++ + A+ + + VHG+ ++ +++++ NA++DMY+K
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR-LDKELVLNNALMDMYSK 339
Query: 279 LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYV 337
G I +A +F+ K+V+SWNT++ G++ G +V QM+ ++ ++ T +
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 338 SILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRS 397
+ +P H L ++H +K ++ VA V Y KCG + A +F+ +
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 398 SSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 445
+ WNA+I H +L+ QM G+ PD T SLL+ACS
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 6/278 (2%)
Query: 244 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 303
D R +H + D ++ ++ MYA G + + VF+ L K++ WN +
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 304 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 363
I+ Y++N L E +E F M ++ P+ TY ++ A + + + G+ +H V+K
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG 217
Query: 364 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 423
L DVFV LV YG G + DA+ LF +P + V WN++I +G +++
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLG 277
Query: 424 QMLDE----GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 479
+M++E PD T V++L C+ + G + H + + L ++D+
Sbjct: 278 EMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALMDM 336
Query: 480 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
+ + G + A I M + W ++G G+
Sbjct: 337 YSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGD 373
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 501 bits (1290), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/717 (37%), Positives = 422/717 (58%), Gaps = 25/717 (3%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
MI + CG EAV FY + +G++ D +T+P V+K+ +L +GKKIH V+KL
Sbjct: 101 MIKGFTSCGLYIEAVQ-FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF DV+V SL+ +Y + G A A K+F++MP RD SWN+MISGY G+ +L +
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEF-NLFVSNNLINMYAK 176
EM G D + S L C+ + G IH + V+ +E ++ V ++++MY+K
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279
Query: 177 FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM-QQAGIQPDLLTLVS 235
+G + +A R+F+ M++R++V+WN +I Y ++ A F M +Q G+QPD++T ++
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSIN 339
Query: 236 LTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK 295
L A L R++HG+ MRRG F+ +++ A++DMY + G + SA +F+ + K
Sbjct: 340 LLPASAILE----GRTIHGYAMRRG-FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK 394
Query: 296 DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKI 355
+VISWN++I Y QNG A+E+FQ + + + + P+ T SILPAY+ +L +G +I
Sbjct: 395 NVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILPAYAESLSLSEGREI 453
Query: 356 HARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 415
HA ++K+ + + LV MY CG ++DA F + V WN+II + +HG G
Sbjct: 454 HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFG 513
Query: 416 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 475
++ F +M+ V P+ TF SLL ACS SG+V EG YF M+ E+GI P ++HYGC
Sbjct: 514 RISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGC 573
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 535
M+DL GR G+ A F++ MP P A IWG+LL A R H ++ + A++++F+++ +N
Sbjct: 574 MLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDN 633
Query: 536 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 595
G YVL+ N+YA G+WE V+ ++ L +G+ +T S++E K +F G+R+H
Sbjct: 634 TGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVAT 693
Query: 596 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTS-------HSERLAIAFGII 648
KIY E+ ++ ++M V ++ + V E ++ S HS RLA FG+I
Sbjct: 694 NKIY-EVLDVVSRM-----VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLI 747
Query: 649 SSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
S+ + + N R+C CH + + S++T REI+V DS FHHF +G CSCG+YW
Sbjct: 748 STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 227/435 (52%), Gaps = 6/435 (1%)
Query: 82 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 141
A +LFD+M D+ WN MI G+ G +EA+ M GV D T ++ A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 142 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 201
++ G IH ++K G +++V N+LI++Y K G A +VF++M ERD+VSWNS+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 202 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 261
I+ Y D ++ F M + G +PD + +S + + + + +H +R
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 262 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQ 321
DV++ +++DMY+K G ++ A +F G+ +++++WN +I YA+NG ++A FQ
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 322 MMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC 381
M E N + P+ T +++LPA A+ +G IH ++ + + T L+DMYG+C
Sbjct: 323 KMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 382 GRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLL 441
G++ A +F ++ + + WN+II+ + +G+ AL F+++ D + PD T S+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 442 TACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPD 501
A + S +SEG R H + + +V ++ G L A ++ ++ D
Sbjct: 439 PAYAESLSLSEG-REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK-D 496
Query: 502 ASIWGALLGACRIHG 516
W +++ A +HG
Sbjct: 497 VVSWNSIIMAYAVHG 511
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 180/340 (52%), Gaps = 10/340 (2%)
Query: 174 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 233
+A +M AL++FD+M + D WN +I + I A F++ M AG++ D T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 234 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 293
+ VA ++ + +H +++ G F+ DV + N+++ +Y KLG A VFE +P
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLG-FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
Query: 294 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 353
+D++SWN++I+GY G ++ +F+ M +C P++ + +S L A SHV + + G
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGK 251
Query: 354 KIHARVIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIH 412
+IH +++ + DV V T ++DMY K G + A +F + + + V WN +I C+ +
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 413 GQGDKALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLK 471
G+ A F++M ++ G++PD IT ++LL A + + EG R H G PH+
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEG-RTIHGYAMRRGFLPHMV 366
Query: 472 HYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 511
++D++G G L A M + S W +++ A
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/646 (39%), Positives = 378/646 (58%), Gaps = 38/646 (5%)
Query: 96 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 155
+W ++I + +AL EMR G D S+L C ++ G +H +I
Sbjct: 72 AWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFI 131
Query: 156 VKHGLEFNLFVSNNLINMYAKFGMMRHAL------------------------------- 184
V+ G++ +L+ N L+NMYAK M +
Sbjct: 132 VRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG 191
Query: 185 -----RVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 239
RVF+ M +DVVS+N+IIA Y QS A M ++PD TL S+ I
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 240 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 299
++ D + +HG+++R+G DV IG+++VDMYAK I + VF L +D IS
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 300 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 359
WN+L+ GY QNG +EA+ +F+ M ++ P + S++PA +H+ L G ++H V
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAHLATLHLGKQLHGYV 369
Query: 360 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 419
++ ++F+A+ LVDMY KCG I A +F ++ V W AII H +HG G +A+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429
Query: 420 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 479
+ F +M +GV+P+ + FV++LTACSH GLV E YF+ M + +G+ L+HY + DL
Sbjct: 430 SLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL 489
Query: 480 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 539
GRAG L A+NFI M V P S+W LL +C +H N+EL ++++F VDSEN+G Y
Sbjct: 490 LGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 540 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 599
VLM N+YA+ G+W+ + ++R R +GL+K P S IE+ NK F +G+R+HP +KI
Sbjct: 550 VLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKIN 609
Query: 600 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 659
+ L+ + +M+ GYV D S VL DV+E+ K +L HSERLA+AFGII++ P + I++
Sbjct: 610 EFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVT 669
Query: 660 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KN+R+C DCH KFIS+ITEREIIVRD++RFHHF G CSCGDYW
Sbjct: 670 KNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 236/445 (53%), Gaps = 48/445 (10%)
Query: 11 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAA 67
S+A+ F + SG PD FP VLK+C ++D G+ +H +++LG + D++
Sbjct: 86 FSKALASFVEMR-ASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144
Query: 68 SLLHMYCR-------------------------------------FGLANVARKLFDDMP 90
+L++MY + FG+ +V R++F+ MP
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV-RRVFEVMP 203
Query: 91 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 150
+D S+N +I+GY QSG +AL ++ EM + D T++S+LP+ + +++ G
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 151 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 210
IH Y+++ G++ ++++ ++L++MYAK + + RVF ++ RD +SWNS++A Y Q+
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 211 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGN 270
A F M A ++P + S+ A L + +HG+++ RG F ++ I +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL-RGGFGSNIFIAS 382
Query: 271 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 330
A+VDMY+K G I +A +F+ + V D +SW +I G+A +G EA+ +F+ M+ +
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR-QGVK 441
Query: 331 PNQGTYVSILPAYSHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMS 389
PNQ +V++L A SHVG + + + K L ++ + D+ G+ G++++A +
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 390 LFYQ--VPRSSSVPWNAIISCHGIH 412
+ V + SV W+ ++S +H
Sbjct: 502 FISKMCVEPTGSV-WSTLLSSCSVH 525
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 183/372 (49%), Gaps = 15/372 (4%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I+ Y + G +A+ + T+ L+PD +T VL VD GK+IH V++
Sbjct: 213 IIAGYAQSGMYEDALRMVREMG-TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK 271
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + DV++ +SL+ MY + + ++F + RD SWN++++GY Q+G EAL +
Sbjct: 272 GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+M V + +S++P CA + G +H Y+++ G N+F+++ L++MY+K
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G ++ A ++FD+M D VSW +II + A F M++ G++P+ + V++
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
+ + + + + + +++ AV D+ + G + A + V+
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 298 IS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQGTYVSILPAYSHVGALRQG 352
S W+TL++ + LA + E +F + E N G YV + Y+ G ++
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE------NMGAYVLMCNMYASNGRWKEM 565
Query: 353 IKIHARVIKNCL 364
K+ R+ K L
Sbjct: 566 AKLRLRMRKKGL 577
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 275/706 (38%), Positives = 402/706 (56%), Gaps = 40/706 (5%)
Query: 37 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC----RFGLANVARKLFDDMPVR 92
+L C+ L + IH ++K+G + + L+ +C F A +F +
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKTIQEP 97
Query: 93 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 152
+ WN M G+ S + V AL + M G+ + T +L CA+S G IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 153 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--------------- 197
+++K G + +L+V +LI+MY + G + A +VFD+ RDVVS
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 198 ----------------WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVA 241
WN++I+ Y ++ + A F M + ++PD T+V++ S A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 242 QLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWN 301
Q R VH +I G F ++ I NA++D+Y+K G + +AC +FE LP KDVISWN
Sbjct: 278 QSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 302 TLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIK 361
TLI GY L EA+ +FQ M E PN T +SILPA +H+GA+ G IH + K
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 362 NC--LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 419
+ + T L+DMY KCG I+ A +F + S WNA+I +HG+ D +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 420 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 479
+ F +M G++PD ITFV LL+ACSHSG++ G+ F M +++ + P L+HYGCM+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 480 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 539
G +G A I M + PD IW +LL AC++HGN+ELG ++ L +++ EN G Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 540 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 599
VL+SNIYA+ G+W V + R+L D+G+KK PG SSIE+++ V F G++ HP+ +IY
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635
Query: 600 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 659
L + ++ G+VPD S VLQ++EE+ KE L HSE+LAIAFG+IS+ P + + I
Sbjct: 636 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 695
Query: 660 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KNLRVC +CH TK IS+I +REII RD RFHHF+DG+CSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 211/401 (52%), Gaps = 37/401 (9%)
Query: 18 FYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYC 74
Y ++ GL P+ YTFP VLK+C + +G++IH VLKLG + D++V SL+ MY
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 75 R-------------------------------FGLANVARKLFDDMPVRDSGSWNAMISG 103
+ G A+KLFD++PV+D SWNAMISG
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 104 YCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFN 163
Y ++GN EAL++ +M V D T+ +++ CA+S +I G +HL+I HG N
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 164 LFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 223
L + N LI++Y+K G + A +F+++ +DV+SWN++I Y N A F M +
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 360
Query: 224 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDV-IIGNAVVDMYAKLGII 282
+G P+ +T++S+ A L R +H +I +R + + + +++DMYAK G I
Sbjct: 361 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDI 420
Query: 283 NSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA 342
+A VF + K + SWN +I G+A +G A + ++F M + I P+ T+V +L A
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSA 479
Query: 343 YSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCG 382
SH G L G I + ++ + + C++D+ G G
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/709 (38%), Positives = 416/709 (58%), Gaps = 8/709 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKL 57
+IS Y G EA++ +++ S + PD +T VL A NL+ G+ +H LK
Sbjct: 178 LISGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G V V L+ MY +F AR++FD+M VRDS S+N MI GY + E++ +
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
E L+ D +TV+S+L C ++ I+ Y++K G V N LI++YAK
Sbjct: 297 LE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC 355
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G M A VF+ M +D VSWNSII+ Y QS D + A F M Q D +T + L
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
S+ +L D + + +H ++ G + D+ + NA++DMYAK G + + +F + D
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICI-DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
++WNT+I+ + G + ++V M + +E+ P+ T++ LP + + A R G +IH
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+++ ++ + L++MY KCG ++++ +F ++ R V W +I +G++G+G+K
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
AL F M G+ PD + F++++ ACSHSGLV EG F M+ + I P ++HY C+V
Sbjct: 594 ALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVG 537
DL R+ + A FIQ MP++PDASIW ++L ACR G+ME S R+ E++ ++ G
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 538 YYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEK 597
Y +L SN YA + KW+ V +R +D+ + K PG+S IEV V +F +G+ + P+ E
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEA 773
Query: 598 IYDELRNLTAKMKSLGYVPDKSFVLQDV-EEDEKEHILTSHSERLAIAFGIISSPPKSPI 656
IY L L + M GY+PD V Q++ EE+EK ++ HSERLAIAFG++++ P +P+
Sbjct: 774 IYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPL 833
Query: 657 QIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
Q+ KNLRVCGDCH TK IS+I REI+VRD+NRFH FKDG CSC D W
Sbjct: 834 QVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 279/525 (53%), Gaps = 15/525 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I + + G EA++ FY S + PD YTFP V+KAC L D G ++ +L +
Sbjct: 77 IIRAFSKNGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GFE D+FV +L+ MY R GL AR++FD+MPVRD SWN++ISGY G EAL+I
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
E++ + D TV+S+LP + G +H + +K G+ + V+N L+ MY KF
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAY---EQSNDPITAHGFFTTMQQAGIQPDLLTLV 234
A RVFD+M RD VS+N++I Y E + + F + Q +PDLLT+
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM--FLENLDQ--FKPDLLTVS 311
Query: 235 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 294
S+ L D ++ ++ ++++ G+ +E + N ++D+YAK G + +A VF +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 295 KDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK 354
KD +SWN++I+GY Q+G EA+++F+MM E + TY+ ++ + + L+ G
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKG 429
Query: 355 IHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQ 414
+H+ IK+ +C D+ V+ L+DMY KCG + D++ +F + +V WN +IS G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 415 GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYG 474
L QM V PD TF+ L C+ G+ H FG + L+
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE-IHCCLLRFGYESELQIGN 548
Query: 475 CMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 519
+++++ + G L + + M R D W ++ A ++G E
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGE 592
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 241/485 (49%), Gaps = 6/485 (1%)
Query: 38 LKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDM-PVRDSGS 96
L + NL + ++IH V+ LG + F + L+ Y F + +F + P ++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 97 WNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIV 156
WN++I + ++G EAL+ ++R VS D T S++ CA + G L++ I+
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 157 KHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHG 216
G E +LFV N L++MY++ G++ A +VFD+M RD+VSWNS+I+ Y A
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 217 FFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMY 276
+ ++ + I PD T+ S+ L + + +HGF ++ G V++ N +V MY
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG-VNSVVVVNNGLVAMY 252
Query: 277 AKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTY 336
K A VF+ + V+D +S+NT+I GY + + E++ +F +E ++ P+ T
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTV 310
Query: 337 VSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPR 396
S+L A H+ L I+ ++K + V L+D+Y KCG + A +F +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 397 SSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY 456
+V WN+IIS + G +A+ F+ M+ + DHIT++ L++ + + G+
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG- 429
Query: 457 FHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHG 516
H + GI L ++D++ + G +G + +M D W ++ AC G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFG 488
Query: 517 NMELG 521
+ G
Sbjct: 489 DFATG 493
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/704 (37%), Positives = 401/704 (56%), Gaps = 36/704 (5%)
Query: 37 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANV--ARKLFDDMPVRDS 94
+++ C +L K+ H +++ G D + A+ L M A++ ARK+FD++P +S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 95 GSWNAMISGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 153
+WN +I Y + V ++ LD + + T ++ A ++ G +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 154 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 213
VK + ++FV+N+LI+ Y G + A +VF + E+DVVSWNS+I + Q P
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 214 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 273
A F M+ ++ +T+V + S A++ + R V +I ++ + NA++
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAML 274
Query: 274 DMYAKLGIINSACAVFEGL-------------------------------PVKDVISWNT 302
DMY K G I A +F+ + P KD+++WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 303 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN 362
LI+ Y QNG +EA+ VF ++ + NQ T VS L A + VGAL G IH+ + K+
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 363 CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF 422
+ + V + L+ MY KCG ++ + +F V + W+A+I +HG G++A++ F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 423 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 482
+M + V+P+ +TF ++ ACSH+GLV E + FH M+ +GI P KHY C+VD+ GR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 483 AGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLM 542
+G+L A FI+ MP+ P S+WGALLGAC+IH N+ L +A RL E++ N G +VL+
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 543 SNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 602
SNIYA +GKWE V E+R R GLKK PG SSIE++ + F +G+ HP EK+Y +L
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Query: 603 RNLTAKMKSLGYVPDKSFVLQDVEEDE-KEHILTSHSERLAIAFGIISSPPKSPIQIFKN 661
+ K+KS GY P+ S VLQ +EE+E KE L HSE+LAI +G+IS+ I++ KN
Sbjct: 635 HEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKN 694
Query: 662 LRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
LRVCGDCH+ K ISQ+ +REIIVRD RFHHF++G CSC D+W
Sbjct: 695 LRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 57
+IS Y + G+ +EA+ F++ L ++ + T L AC L G+ IH + K
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + V ++L+HMY + G +R++F+ + RD W+AMI G G EA+D+
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN------LI 171
+M+ V + +T ++ C+ +GL+ + H +E N + ++
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSH-----TGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 172 NMYAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 204
++ + G + A++ + M + W +++ A
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 280/733 (38%), Positives = 410/733 (55%), Gaps = 51/733 (6%)
Query: 2 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDF----YTFPPVLKACRNLVDGKKIHCSVLKL 57
IS Y+R GR +EA+ F + S + + Y + R L D V
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV--- 127
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
W+V + Y R AR+LF+ MP RD SWN M+SGY Q+G +A +
Sbjct: 128 --SWNVMIKG-----YVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
D M + ++ ++L ++ + ++ K + L N L+ + K
Sbjct: 181 DRM----PEKNDVSWNALLSAYVQNSKMEEACML----FKSRENWALVSWNCLLGGFVKK 232
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFF-----------TTMQQAGI 226
+ A + FD M RDVVSWN+II Y QS A F T M I
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 227 QPDLLTLV-SLTSIVAQLNDCRNSRSVHGFIMRRGWFME------------DVIIGNAVV 273
Q ++ L + + N+ + + G++ +G ME +V N ++
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYV--QGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 274 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPN 332
YA+ G I+ A +F+ +P +D +SW +I GY+Q+G + EA+ +F QM E +N
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN-- 408
Query: 333 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY 392
+ ++ S L + V AL G ++H R++K FV L+ MY KCG I++A LF
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 393 QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSE 452
++ V WN +I+ + HG G+ AL FF M EG++PD T V++L+ACSH+GLV +
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 453 GQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGAC 512
G++YF+ M +++G+ P+ +HY CMVDL GRAG L AHN ++NMP PDA+IWG LLGA
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 513 RIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPG 572
R+HGN EL A+D++F ++ EN G YVL+SN+YA+ G+W V ++R RD+G+KK PG
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 573 WSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEH 632
+S IE+ NK F G+ HP+ ++I+ L L +MK GYV S VL DVEE+EKE
Sbjct: 649 YSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKER 708
Query: 633 ILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFH 692
++ HSERLA+A+GI+ PI++ KNLRVC DCHN K++++IT R II+RD+NRFH
Sbjct: 709 MVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFH 768
Query: 693 HFKDGICSCGDYW 705
HFKDG CSCGDYW
Sbjct: 769 HFKDGSCSCGDYW 781
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 229/478 (47%), Gaps = 51/478 (10%)
Query: 60 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 119
EW+V +++ Y R G N A ++F MP S S+N MISGY ++G A + DE
Sbjct: 66 EWNVAISS-----YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 120 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 179
M D ++ ++ R+ N+ G L+ + E ++ N +++ YA+ G
Sbjct: 121 M----PERDLVSWNVMIKGYVRNRNL--GKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 180 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 239
+ A VFD+M E++ VSWN++++AY Q++ A F + + LVS +
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN-------WALVSWNCL 225
Query: 240 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 299
+ + + V + DV+ N ++ YA+ G I+ A +F+ PV+DV +
Sbjct: 226 LGGF--VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT 283
Query: 300 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH-AR 358
W +++GY QN + EA E+F M E NE++ N ++L Y QG ++ A+
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWN-----AMLAGYV------QGERMEMAK 332
Query: 359 VIKNCL-CFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+ + + C +V ++ Y +CG+I +A +LF ++P+ V W A+I+ + G +
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
AL F QM EG R + +F S L+ C+ + G++ H + G + GC V
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ-LHGRLVKGGYET-----GCFV 446
Query: 478 D-----LFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 530
++ + G + A++ + M + D W ++ HG G VA R FE
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG---FGEVAL-RFFE 499
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
MI+ Y + G EA+ F Q G R + +F L C ++V GK++H ++K
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G+E FV +LL MYC+ G A LF +M +D SWN MI+GY + G AL
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAK 176
+ M+ EG+ D T+ ++L C+ + + G + + +G+ N ++++ +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 177 FGMMRHALRVFDQM-MERDVVSWNSIIAA 204
G++ A + M E D W +++ A
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 56/343 (16%)
Query: 265 DVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMME 324
D+ N + Y + G N A VF+ +P +S+N +I+GY +NG A ++F M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 325 ECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRI 384
E + ++ N + ++G R+ +I DV ++ Y + G +
Sbjct: 123 ERDLVSWN--VMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQNGCV 173
Query: 385 DDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFF---------------------- 422
DDA S+F ++P + V WNA++S + + + ++A F
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 423 -----RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM--MQEEFGIKPHLKHYGC 475
RQ D D +++ +++T + SG + E ++ F +Q+ F +
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF-------TWTA 286
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEV-DSE 534
MV + + + A MP R + S W A+L ME+ + LF+V
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVS-WNAMLAGYVQGERMEM----AKELFDVMPCR 341
Query: 535 NVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP-GWSSI 576
NV + M YA GK + E ++L D+ K+ P W+++
Sbjct: 342 NVSTWNTMITGYAQCGK---ISEAKNLF-DKMPKRDPVSWAAM 380
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 47/277 (16%)
Query: 354 KIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHG 413
K + + C D+ + Y + GR ++A+ +F ++PR SSV +N +IS + +G
Sbjct: 50 KSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG 109
Query: 414 QGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHY 473
+ + A R++ DE D +++ ++ + + + + F +M E + +
Sbjct: 110 EFELA----RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-----DVCSW 160
Query: 474 GCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMEL------------- 520
M+ + + G + A + MP + D S W ALL A + ME
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVS-WNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 521 --------GAVASDRLFEV----DSENVGYYVLMSNI---YANVGKWEGVDEVRSLARDR 565
G V ++ E DS NV V + I YA GK +DE R L +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK---IDEARQLFDES 276
Query: 566 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDEL 602
++ W+++ Y NR + +++D++
Sbjct: 277 PVQDVFTWTAMVSG------YIQNRMVEEARELFDKM 307
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/663 (39%), Positives = 372/663 (56%), Gaps = 40/663 (6%)
Query: 48 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 107
+ +H ++ + + L+ Y ARK+FD++P R+ N MI Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 108 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 167
G E + + M V D T +L C+ S I+ G IH K GL LFV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 168 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 227
N L++MY K G + A V D+M RDVVSWNS++ Y Q+ A M+ I
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 228 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 287
D T+ SL V+ E+V+ V DM+ K+G
Sbjct: 239 HDAGTMASLLPAVSNTT------------------TENVMY---VKDMFFKMG------- 270
Query: 288 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 347
K ++SWN +I Y +N + EA+E++ ME + P+ + S+LPA
Sbjct: 271 ------KKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEPDAVSITSVLPACGDTS 323
Query: 348 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 407
AL G KIH + + L ++ + L+DMY KCG ++ A +F + V W A+IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 408 CHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIK 467
+G G+G A+ F ++ D G+ PD I FV+ L ACSH+GL+ EG+ F +M + + I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 468 PHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDR 527
P L+H CMVDL GRAG + A+ FIQ+M + P+ +WGALLGACR+H + ++G +A+D+
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 528 LFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYT 587
LF++ E GYYVL+SNIYA G+WE V +R++ + +GLKK PG S++EVN + F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 588 GNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGI 647
G+R+HP+ ++IY EL L KMK LGYVPD L DVEE++KE L HSE+LAI F +
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFAL 623
Query: 648 ISSPPK-----SPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCG 702
+++ + + I+I KNLR+CGDCH K ISQIT REII+RD+NRFH F+ G+CSCG
Sbjct: 624 MNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCG 683
Query: 703 DYW 705
DYW
Sbjct: 684 DYW 686
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 210/432 (48%), Gaps = 57/432 (13%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKL 57
MI YV G E V F +RPD YTFP VLKAC +V G+KIH S K+
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMC-GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G +FV L+ MY + G + AR + D+M RD SWN+++ GY Q+ +AL++
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
EM +S D T+AS+LP + + + N+ MY K
Sbjct: 230 REMESVKISHDAGTMASLLPAVSNT-----------------------TTENV--MYVK- 263
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
+F +M ++ +VSWN +I Y ++ P+ A ++ M+ G +PD +++ S+
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
+ + +HG+I R+ + ++++ NA++DMYAK G + A VFE + +DV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKK-LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
+SW +I+ Y +G +A+ +F +++ + P+ +V+ L A SH G L +G
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEG----- 429
Query: 358 RVIKNC--LCFDVFVAT-------CLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 407
++C L D + T C+VD+ G+ G++ +A + + W A++
Sbjct: 430 ---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 408 CHGIHGQGDKAL 419
+H D L
Sbjct: 487 ACRVHSDTDIGL 498
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 276/719 (38%), Positives = 415/719 (57%), Gaps = 19/719 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 57
M++ Y GR +A+ F +F L GL P+ Y + V++AC N + G+ ++K
Sbjct: 137 MMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 58 G-FEWDVFVAASLLHMYCRFGLA-NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 115
G FE DV V SL+ M+ + + A K+FD M + +W MI+ Q G EA+
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 116 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 175
+M L G D T++S+ CA +N+ G +H + ++ GL + V +L++MYA
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYA 313
Query: 176 KF---GMMRHALRVFDQMMERDVVSWNSIIAAY-EQSNDPITAHGFFTTM-QQAGIQPDL 230
K G + +VFD+M + V+SW ++I Y + N A F+ M Q ++P+
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 231 LTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFE 290
T S L+D R + V G +RG + + N+V+ M+ K + A FE
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 291 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 350
L K+++S+NT + G +N +A ++ + E E+ + T+ S+L ++VG++R
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVANVGSIR 491
Query: 351 QGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHG 410
+G +IH++V+K L + V L+ MY KCG ID A +F + + + W ++I+
Sbjct: 492 KGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 411 IHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 470
HG + L F QM++EGV+P+ +T+V++L+ACSH GLVSEG R+F+ M E+ IKP +
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 471 KHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 530
+HY CMVDL RAG L A FI MP + D +W LGACR+H N ELG +A+ ++ E
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE 671
Query: 531 VDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNR 590
+D Y+ +SNIYA GKWE E+R ++R L K G S IEV +K+ FY G+
Sbjct: 672 LDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDT 731
Query: 591 THPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV----EEDEKEHILTSHSERLAIAFG 646
HP +IYDEL L ++K GYVPD VL + +E EKE +L HSE++A+AFG
Sbjct: 732 AHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFG 791
Query: 647 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+IS+ P+++FKNLRVCGDCHN K+IS ++ REI++RD NRFHHFKDG CSC DYW
Sbjct: 792 LISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 235/485 (48%), Gaps = 28/485 (5%)
Query: 100 MISGYCQSGNAVEALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKH 158
+I + +G+ A+ LD M +G+ MD +T +S+L C R+ + G L+H +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 159 GLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM---ERDVVSWNSIIAAYEQSNDPITAH 215
+E + + N+LI++Y+K G A VF+ M +RDVVSW++++A Y + + A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 216 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 275
F + G+ P+ ++ + + R GF+M+ G F DV +G +++DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 276 YAK-LGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQG 334
+ K +A VF+ + +V++W +IT Q G EAI F M + ++
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKF 270
Query: 335 TYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKC---GRIDDAMSLF 391
T S+ A + + L G ++H+ I++ L D V LVDMY KC G +DD +F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 392 YQVPRSSSVPWNAIISCHGIH-GQGDKALNFFRQMLDEG-VRPDHITFVSLLTACSHSGL 449
++ S + W A+I+ + + +A+N F +M+ +G V P+H TF S AC G
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC---GN 385
Query: 450 VSEGQRYFHMMQEEF--GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGA 507
+S+ + ++ + F G+ + ++ +F ++ + A +++ + S
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 508 LLGACRIHGNMELGAVASDRLFEVDSENVG-----YYVLMSNIYANVGKWEGVDEVRSLA 562
L G CR + N E A L E+ +G + L+S + ANVG +++ S
Sbjct: 446 LDGTCR-NLNFEQ---AFKLLSEITERELGVSAFTFASLLSGV-ANVGSIRKGEQIHSQV 500
Query: 563 RDRGL 567
GL
Sbjct: 501 VKLGL 505
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/706 (37%), Positives = 417/706 (59%), Gaps = 15/706 (2%)
Query: 13 EAVDCFYQFTLTSGLRPDFY-----TFPPV-LKACRNLVDGKKIHCSVLKLGF-EWDVFV 65
EA F + P+ Y +FP L L G+++H V+ G ++ V +
Sbjct: 292 EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGI 351
Query: 66 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 125
L++MY + G AR++F M +DS SWN+MI+G Q+G +EA++ MR +
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 126 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 185
T+ S L CA G IH +K G++ N+ VSN L+ +YA+ G + +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 186 VFDQMMERDVVSWNSIIAAYEQSNDPI-TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLN 244
+F M E D VSWNSII A +S + A F Q+AG + + +T S+ S V+ L+
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 245 DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTL 303
+ +HG ++ ++ NA++ Y K G ++ +F + + D ++WN++
Sbjct: 532 FGELGKQIHGLALKNN-IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 304 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 363
I+GY N L ++A+++ M + + + Y ++L A++ V L +G+++HA ++ C
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 364 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 423
L DV V + LVDMY KCGR+D A+ F +P +S WN++IS + HGQG++AL F
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 424 QM-LDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGR 482
M LD PDH+TFV +L+ACSH+GL+ EG ++F M + +G+ P ++H+ CM D+ GR
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 483 AGHLGMAHNFIQNMPVRPDASIWGALLGAC-RIHG-NMELGAVASDRLFEVDSENVGYYV 540
AG L +FI+ MP++P+ IW +LGAC R +G ELG A++ LF+++ EN YV
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 541 LMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYD 600
L+ N+YA G+WE + + R +D +KK G+S + + + V +F G+++HP + IY
Sbjct: 830 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYK 889
Query: 601 ELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKS-PIQIF 659
+L+ L KM+ GYVP F L D+E++ KE IL+ HSE+LA+AF + + + PI+I
Sbjct: 890 KLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 949
Query: 660 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KNLRVCGDCH+ K+IS+I R+II+RDSNRFHHF+DG CSC D+W
Sbjct: 950 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 238/473 (50%), Gaps = 18/473 (3%)
Query: 51 HCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNA 110
H + K + DV++ +L++ Y G + ARK+FD+MP+R+ SW ++SGY ++G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 111 VEALDILDEMRLEGVSMDPITVASILPVCAR--SDNILSGLLIHLYIVKHGLEFNLFVSN 168
EAL L +M EG+ + S+L C S IL G IH + K + VSN
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 169 NLINMYAK-FGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 227
LI+MY K G + +AL F + ++ VSWNSII+ Y Q+ D +A F++MQ G +
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 228 PDLLTLVSLTSIVAQLN--DCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 285
P T SL + L D R + I + G + D+ +G+ +V +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSG-LLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 286 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSIL---PA 342
VF + ++ ++ N L+ G + EA ++F M +++P +YV +L P
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPE 320
Query: 343 YS---HVGALRQGIKIHARVIKNCLC-FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 398
YS VG L++G ++H VI L F V + LV+MY KCG I DA +FY +
Sbjct: 321 YSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 399 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 458
SV WN++I+ +G +A+ ++ M + P T +S L++C+ GQ+ H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ-IH 438
Query: 459 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 511
+ GI ++ ++ L+ G+L +MP S W +++GA
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 261/533 (48%), Gaps = 21/533 (3%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG-----KKIHCSVL 55
+ISVY + G A F G RP YTF ++ +L + ++I C++
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQY-DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 56 KLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 115
K G D+FV + L+ + + G + ARK+F+ M R++ + N ++ G + EA
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 116 ILDEMRLEGVSMDP---ITVASILPVCARSDNI--LSGLLIHLYIVKHGL-EFNLFVSNN 169
+ +M + + P + + S P + ++ + G +H +++ GL +F + + N
Sbjct: 296 LFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 170 LINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPD 229
L+NMYAK G + A RVF M ++D VSWNS+I +Q+ I A + +M++ I P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 230 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVF 289
TL+S S A L + + +HG ++ G + +V + NA++ +YA+ G +N +F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNALMTLYAETGYLNECRKIF 473
Query: 290 EGLPVKDVISWNTLITGYAQNGLA-SEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGA 348
+P D +SWN++I A++ + EA+ F + + N+ T+ S+L A S +
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSF 532
Query: 349 LRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 407
G +IH +KN + + L+ YGKCG +D +F ++ R +V WN++IS
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 408 CHGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 466
+ IH + KAL+ ML G R D + ++L+A + + G H +
Sbjct: 593 GY-IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-VHACSVRACL 650
Query: 467 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 519
+ + +VD++ + G L A F MPVR S W +++ HG E
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGE 702
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 255/526 (48%), Gaps = 24/526 (4%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL-----VDGKKIHCSVL 55
++S Y R G EA+ F + + G+ + Y F VL+AC+ + + G++IH +
Sbjct: 73 IVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 56 KLGFEWDVFVAASLLHMYCR-FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 114
KL + D V+ L+ MY + G A F D+ V++S SWN++IS Y Q+G+ A
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 115 DILDEMRLEGVSMDPITVASILPV-CARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLIN 172
I M+ +G T S++ C+ ++ + L I I K GL +LFV + L++
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVS 251
Query: 173 MYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLL 231
+AK G + +A +VF+QM R+ V+ N ++ + A F M + P+
Sbjct: 252 AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY 311
Query: 232 TLVSLTSI----VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 287
++ L+S +A+ + R VHG ++ G V IGN +V+MYAK G I A
Sbjct: 312 VIL-LSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 288 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 347
VF + KD +SWN++ITG QNG EA+E ++ M ++I P T +S L + + +
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLK 429
Query: 348 ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIIS 407
+ G +IH +K + +V V+ L+ +Y + G +++ +F +P V WN+II
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII- 488
Query: 408 CHGIHGQGDKALN----FFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 463
G + +++L F G + + ITF S+L+A S G++ H + +
Sbjct: 489 --GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-IHGLALK 545
Query: 464 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL 509
I ++ +G+ G + M R D W +++
Sbjct: 546 NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 345 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 404
H GA R H+R+ KN L DV++ L++ Y + G A +F ++P + V W
Sbjct: 16 HRGAAR---FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72
Query: 405 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 450
I+S + +G+ +AL F R M+ EG+ + FVS+L AC G V
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 60
MIS Y R G+ EA+ F L PD TF VL AC H +L+ GF+
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS--------HAGLLEEGFK 742
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/615 (40%), Positives = 367/615 (59%), Gaps = 10/615 (1%)
Query: 96 SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYI 155
S N +I C+ G +A+ +L + S T ++ C ++ L +H +I
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 156 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 215
+ +G + + F++ LI MY+ G + +A +VFD+ +R + WN++ A +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 216 GFFTTMQQAGIQPDLLTLV-SLTSIVAQ---LNDCRNSRSVHGFIMRRGWFMEDVIIGNA 271
G + M + G++ D T L + VA +N + +H + RRG + V I
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG-YSSHVYIMTT 222
Query: 272 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEIN 330
+VDMYA+ G ++ A VF G+PV++V+SW+ +I YA+NG A EA+ F +MM E + +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 331 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 390
PN T VS+L A + + AL QG IH +++ L + V + LV MYG+CG+++ +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 391 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 450
F ++ V WN++IS +G+HG G KA+ F +ML G P +TFVS+L ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 451 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 510
EG+R F M + GIKP ++HY CMVDL GRA L A +Q+M P +WG+LLG
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Query: 511 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 570
+CRIHGN+EL AS RLF ++ +N G YVL+++IYA W+ V V+ L RGL+K
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522
Query: 571 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEK 630
PG +EV K+ F + + +P E+I+ L L MK GY+P VL ++E +EK
Sbjct: 523 PGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582
Query: 631 EHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNR 690
E I+ HSE+LA+AFG+I++ PI+I KNLR+C DCH +TKFIS+ E+EI+VRD NR
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNR 642
Query: 691 FHHFKDGICSCGDYW 705
FH FK+G+CSCGDYW
Sbjct: 643 FHRFKNGVCSCGDYW 657
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 224/439 (51%), Gaps = 22/439 (5%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
+I + G+L +A+ Q + P T+ ++ C +L D ++H +L
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQES-----SPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + D F+A L+ MY G + ARK+FD R WNA+ +G+ E L +
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 118 DEMRLEGVSMDPITVASILPVCARSD----NILSGLLIHLYIVKHGLEFNLFVSNNLINM 173
+M GV D T +L C S+ +++ G IH ++ + G ++++ L++M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 174 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLL 231
YA+FG + +A VF M R+VVSW+++IA Y ++ A F M + P+ +
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 232 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI-IGNAVVDMYAKLGIINSACAVFE 290
T+VS+ A L + +HG+I+RRG ++ ++ + +A+V MY + G + VF+
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRG--LDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 291 GLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALR 350
+ +DV+SWN+LI+ Y +G +AI++F+ M N +P T+VS+L A SH G +
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVE 403
Query: 351 QGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP--WNAIIS 407
+G ++ + ++ + + C+VD+ G+ R+D+A + Q R+ P W +++
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV-QDMRTEPGPKVWGSLLG 462
Query: 408 CHGIHGQGDKALNFFRQML 426
IHG + A R++
Sbjct: 463 SCRIHGNVELAERASRRLF 481
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/727 (34%), Positives = 399/727 (54%), Gaps = 72/727 (9%)
Query: 49 KIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 108
+ H +LK G + D +++A L+ Y + N A + +P S++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 109 NAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSN 168
+++ + M G+ D + ++ VCA G IH GL+ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 169 NLINMYAKFGMMRHALRVFDQMMERDVV-------------------------------- 196
++ +MY + G M A +VFD+M ++DVV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 197 ---SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH 253
SWN I++ + +S A F + G PD +T+ S+ V R +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 254 GFIMRRGWFMEDVIIGNAVVDMYAKLG-------------------------------II 282
G+++++G + +I +A++DMY K G ++
Sbjct: 276 GYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 283 NSACAVFEGLPVK----DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVS 338
+ A +FE + +V+SW ++I G AQNG EA+E+F+ M+ + PN T S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG-VKPNHVTIPS 393
Query: 339 ILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 398
+LPA ++ AL G H ++ L +V V + L+DMY KCGRI+ + +F +P +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 399 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 458
V WN++++ +HG+ + ++ F ++ ++PD I+F SLL+AC GL EG +YF
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 459 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 518
MM EE+GIKP L+HY CMV+L GRAG L A++ I+ MP PD+ +WGALL +CR+ N+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 519 ELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEV 578
+L +A+++LF ++ EN G YVL+SNIYA G W VD +R+ GLKK PG S I+V
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 579 NNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHS 638
N+V G+++HP+ ++I +++ ++ +M+ G+ P+ F L DVEE E+E +L HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693
Query: 639 ERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGI 698
E+LA+ FG++++P +P+Q+ KNLR+CGDCH KFIS REI +RD+NRFHHFKDGI
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753
Query: 699 CSCGDYW 705
CSCGD+W
Sbjct: 754 CSCGDFW 760
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 105/207 (50%), Gaps = 6/207 (2%)
Query: 9 GRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKLGFEWDVFV 65
G+ EA++ F + + +G++P+ T P +L AC N+ G+ H +++ +V V
Sbjct: 367 GKDIEALELFREMQV-AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 66 AASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGV 125
++L+ MY + G N+++ +F+ MP ++ WN++++G+ G A E + I + + +
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 126 SMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 184
D I+ S+L C + G + ++G++ L + ++N+ + G ++ A
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 185 RVFDQM-MERDVVSWNSIIAAYEQSND 210
+ +M E D W +++ + N+
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNN 572
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/753 (34%), Positives = 418/753 (55%), Gaps = 84/753 (11%)
Query: 32 YTFPPVLKACRNLVDGKKIHCSVLKLGF---------EWDVFVAASLLHMYCRFGLANVA 82
+ F P L+D ++C +L + E D +++ YC G +A
Sbjct: 43 FGFQPRAHILNRLID---VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 83 RKLFDDMPV--RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 140
R +F+ PV RD+ +NAMI+G+ + + A+++ +M+ EG D T AS+L A
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 141 R-SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG----MMRHALRVFDQMMERDV 195
+D+ + H +K G + VSN L+++Y+K ++ A +VFD+++E+D
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 196 VSWNSIIAAYEQS---------------NDPITAH----------GFFTT-------MQQ 223
SW +++ Y ++ N + A+ GF+ M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 224 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 283
+GI+ D T S+ A + + VH +++RR F N++V +Y K G +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFD 337
Query: 284 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN------------- 330
A A+FE +P KD++SWN L++GY +G EA +F+ M+E N ++
Sbjct: 338 EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGF 397
Query: 331 -----------------PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATC 373
P + + + + +GA G + HA+++K +
Sbjct: 398 GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 374 LVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPD 433
L+ MY KCG +++A +F +P SV WNA+I+ G HG G +A++ + +ML +G+RPD
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 434 HITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFI 493
IT +++LTACSH+GLV +G++YF M+ + I P HY ++DL R+G A + I
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 494 QNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWE 553
+++P +P A IW ALL CR+HGNMELG +A+D+LF + E+ G Y+L+SN++A G+WE
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637
Query: 554 GVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLG 613
V VR L RDRG+KK S IE+ +V F + +HP+ E +Y L++L +M+ LG
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Query: 614 YVPDKSFVLQDVEED-EKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 672
YVPD SFVL DVE D KE +LT+HSE++A+AFG++ PP + I+IFKNLR CGDCHN+
Sbjct: 698 YVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFF 757
Query: 673 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+F+S + +R+II+RD RFHHF++G CSCG++W
Sbjct: 758 RFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 240/521 (46%), Gaps = 84/521 (16%)
Query: 26 GLRPDFYTFPPVLKACRNLVDGKK----IHCSVLKLGFEWDVFVAASLLHMYCRFG---- 77
G +PD +TF VL + D +K H + LK G + V+ +L+ +Y +
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 78 LANVARKLFDDMPVRDSGSWNAMISGYCQSG---------------------NAV----- 111
L + ARK+FD++ +D SW M++GY ++G NA+
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 112 ------EALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 165
EAL+++ M G+ +D T S++ CA + + G +H Y+++ +F+
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFH 321
Query: 166 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN---------------- 209
N+L+++Y K G A +F++M +D+VSWN++++ Y S
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 210 --------DPITAHGF-------FTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 254
+ +GF F+ M++ G +P A L N + H
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 255 FIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 314
+++ G F + GNA++ MYAK G++ A VF +P D +SWN LI Q+G +
Sbjct: 442 QLLKIG-FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 315 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH---ARVIKNCLCFDVFVA 371
EA++V++ M + I P++ T +++L A SH G + QG K V + D +
Sbjct: 501 EAVDVYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR 559
Query: 372 TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGV 430
L+D+ + G+ DA S+ +P + ++ W A++S +HG + + ++ G+
Sbjct: 560 --LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GL 615
Query: 431 RPDHI-TFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHL 470
P+H T++ L + +G E R +M++ G+K +
Sbjct: 616 IPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR-GVKKEV 655
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 196/478 (41%), Gaps = 111/478 (23%)
Query: 151 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMME------------------ 192
+H I+ G + + N LI++Y K + +A ++FD++ E
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 193 ---------------RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
RD V +N++I + +ND +A F M+ G +PD T S+
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 238 SIVAQL-NDCRNSRSVHGFIMRRG-WFMEDVIIGNAVVDMYAKLG----IINSACAVFEG 291
+ +A + +D + H ++ G ++ V NA+V +Y+K +++SA VF+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 292 LPVKDVISWNTLITGYAQN--------------------------------GLASEAIEV 319
+ KD SW T++TGY +N G EA+E+
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEM 273
Query: 320 FQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYG 379
+ M I ++ TY S++ A + G L+ G ++HA V++ F LV +Y
Sbjct: 274 VRRMVSSG-IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYY 331
Query: 380 KCGRIDDAMSLFYQVPRSSSVPWNAIISCH------------------------------ 409
KCG+ D+A ++F ++P V WNA++S +
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 410 -GIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKP 468
+G G++ L F M EG P F + +C+ G GQ+Y H + G
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY-HAQLLKIGFDS 450
Query: 469 HLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 526
L ++ ++ + G + A + MP D+ W AL+ A HG+ GA A D
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGH---GAEAVD 504
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 164/353 (46%), Gaps = 61/353 (17%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLK- 56
MIS YV G EA++ + ++SG+ D +T+P V++AC L GK++H VL+
Sbjct: 257 MISGYVNRGFYQEALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 57 --LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 114
F +D SL+ +Y + G + AR +F+ MP +D SWNA++SGY SG+ EA
Sbjct: 316 EDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 115 DILDEMR--------------------LEGVSM---------DPITVA--SILPVCARSD 143
I EM+ EG+ + +P A + CA
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 144 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIA 203
+G H ++K G + +L N LI MYAK G++ A +VF M D VSWN++IA
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 204 AYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF- 262
A Q A + M + GI+PD +TL+++ L C ++ V R +F
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV------LTACSHAGLVD---QGRKYFD 542
Query: 263 -MEDVIIGNAVVDMYAKL-------GIINSACAVFEGLPVKDVIS-WNTLITG 306
ME V D YA+L G + A +V E LP K W L++G
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 87/391 (22%)
Query: 249 SRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYA 308
+R+VHG I+ G F I N ++D+Y K +N A +F+ + D I+ T+++GY
Sbjct: 33 ARAVHGNIITFG-FQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYC 91
Query: 309 QNGLASEAIEVFQMMEEC---------------------NEIN-----------PNQGTY 336
+G + A VF+ C + IN P+ T+
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 337 VSILPAYSHVG-ALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGR----IDDAMSLF 391
S+L + V +Q ++ HA +K+ + V+ LV +Y KC + A +F
Sbjct: 152 ASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 392 YQVPRSSSVPW--------------------------------NAIISCHGIHGQGDKAL 419
++ W NA+IS + G +AL
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 420 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRY--FHMMQEEFGIKPHLKHY-GCM 476
R+M+ G+ D T+ S++ AC+ +GL+ G++ + + +E+F H+ +
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSL 326
Query: 477 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLF--EVDSE 534
V L+ + G A + MP + D W ALL G + G + +L E+ +
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS-----GYVSSGHIGEAKLIFKEMKEK 380
Query: 535 NV-GYYVLMSNIYANVGKWEGVDEVRSLARD 564
N+ + +++S + N EG+ + R+
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 362/586 (61%), Gaps = 5/586 (0%)
Query: 122 LEG--VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 179
LEG + D ++L C ++ G ++H +I++ ++ + N L+NMYAK G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 180 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSI 239
+ A +VF++M +RD V+W ++I+ Y Q + P A FF M + G P+ TL S+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 240 VAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVIS 299
A +HGF ++ G F +V +G+A++D+Y + G+++ A VF+ L ++ +S
Sbjct: 171 AAAERRGCCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 300 WNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARV 359
WN LI G+A+ +A+E+FQ M + P+ +Y S+ A S G L QG +HA +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 360 IKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKAL 419
IK+ F L+DMY K G I DA +F ++ + V WN++++ + HG G +A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 420 NFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDL 479
+F +M G+RP+ I+F+S+LTACSHSGL+ EG Y+ +M+++ GI P HY +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 480 FGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYY 539
GRAG L A FI+ MP+ P A+IW ALL ACR+H N ELGA A++ +FE+D ++ G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 540 VLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIY 599
V++ NIYA+ G+W VR ++ G+KK P S +E+ N + +F + HP+ E+I
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Query: 600 DELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIF 659
+ + AK+K LGYVPD S V+ V++ E+E L HSE++A+AF ++++PP S I I
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587
Query: 660 KNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KN+RVCGDCH K S++ REIIVRD+NRFHHFKDG CSC DYW
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 209/385 (54%), Gaps = 10/385 (2%)
Query: 34 FPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMP 90
+ +LK C + L+ G+ +H +L+ F D+ + +LL+MY + G ARK+F+ MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 91 VRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLL 150
RD +W +ISGY Q +AL ++M G S + T++S++ A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 151 IHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSND 210
+H + VK G + N+ V + L+++Y ++G+M A VFD + R+ VSWN++IA + + +
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 211 PITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVI--I 268
A F M + G +P + SL + + VH ++++ G E ++
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG---EKLVAFA 299
Query: 269 GNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE 328
GN ++DMYAK G I+ A +F+ L +DV+SWN+L+T YAQ+G EA+ F+ M
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG- 358
Query: 329 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 388
I PN+ +++S+L A SH G L +G + + K+ + + + +VD+ G+ G ++ A+
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 389 SLFYQVP-RSSSVPWNAIISCHGIH 412
++P ++ W A+++ +H
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMH 443
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 189/378 (50%), Gaps = 38/378 (10%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
+IS Y + R +A+ F+ L G P+ +T V+KA R G ++H +K
Sbjct: 132 LISGYSQHDRPCDAL-LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF+ +V V ++LL +Y R+GL + A+ +FD + R+ SWNA+I+G+ + +AL++
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF 250
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
M +G + AS+ C+ + + G +H Y++K G + F N L++MYAK
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + A ++FD++ +RDVVSWNS++ AY Q A +F M++ GI+P+ ++ +S+
Sbjct: 311 GSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVL 370
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGW-----FMEDVIIGNA-----VVDMYAKLGIINSACA 287
+ + H ++ GW +D I+ A VVD+ + G +N A
Sbjct: 371 TACS-----------HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 288 VFEGLPVKDVIS-WNTLITG---YAQNGLASEAIE-VFQMMEECNEINPNQ-GTYVSILP 341
E +P++ + W L+ + L + A E VF E++P+ G +V +
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVF-------ELDPDDPGPHVILYN 472
Query: 342 AYSHVGALRQGIKIHARV 359
Y+ G ++ ++
Sbjct: 473 IYASGGRWNDAARVRKKM 490
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/679 (36%), Positives = 390/679 (57%), Gaps = 11/679 (1%)
Query: 37 VLKAC--RNLVD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 93
+L+ C + L D G ++HC +LK G ++ + L+ MYC+ +A K+FD MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 94 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 153
SW+A++SG+ +G+ +L + EM +G+ + T ++ L C + + GL IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 154 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 213
+ +K G E + V N+L++MY+K G + A +VF ++++R ++SWN++IA + +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 214 AHGFFTTMQQAGIQ--PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFM-EDVIIGN 270
A F MQ+A I+ PD TL SL + + +HGF++R G+ I
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 271 AVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEIN 330
++VD+Y K G + SA F+ + K +ISW++LI GYAQ G EA+ +F+ ++E N
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-Q 310
Query: 331 PNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSL 390
+ SI+ ++ LRQG ++ A +K + V +VDMY KCG +D+A
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 391 FYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 450
F ++ + W +I+ +G HG G K++ F +ML + PD + ++++L+ACSHSG++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 451 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 510
EG+ F + E GIKP ++HY C+VDL GRAG L A + I MP++P+ IW LL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 511 ACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKT 570
CR+HG++ELG L +D++N YV+MSN+Y G W R L +GLKK
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 571 PGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDE 629
G S +E+ +V F +G +HP I + L+ +++ LGYV L D++++
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDES 610
Query: 630 KEHILTSHSERLAIAFGIIS---SPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 686
KE L +HSE+LAI + + + I++FKNLRVC DCH + K +S+IT+ +VR
Sbjct: 611 KEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVR 670
Query: 687 DSNRFHHFKDGICSCGDYW 705
D+ RFH F+DG CSCGDYW
Sbjct: 671 DAVRFHSFEDGCCSCGDYW 689
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 229/422 (54%), Gaps = 12/422 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
++S +V G L ++ F + G+ P+ +TF LKAC L G +IH LK+
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMG-RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI 136
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GFE V V SL+ MY + G N A K+F + R SWNAMI+G+ +G +ALD
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF 196
Query: 118 DEMRLEGVSMDP--ITVASILPVCARSDNILSGLLIHLYIVKHGLE--FNLFVSNNLINM 173
M+ + P T+ S+L C+ + I +G IH ++V+ G + ++ +L+++
Sbjct: 197 GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDL 256
Query: 174 YAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTL 233
Y K G + A + FDQ+ E+ ++SW+S+I Y Q + + A G F +Q+ Q D L
Sbjct: 257 YVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 316
Query: 234 VSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLP 293
S+ + A R + + ++ +E ++ N+VVDMY K G+++ A F +
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEAEKCFAEMQ 375
Query: 294 VKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGI 353
+KDVISW +ITGY ++GL +++ +F M N I P++ Y+++L A SH G +++G
Sbjct: 376 LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN-IEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 354 KIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGI 411
++ +++++ + + V C+VD+ G+ GR+ +A L +P +V W ++S +
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 412 HG 413
HG
Sbjct: 495 HG 496
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 207/409 (50%), Gaps = 11/409 (2%)
Query: 132 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 191
+ SIL VC R G +H Y++K G NL SN LI+MY K A +VFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 192 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 251
ER+VVSW+++++ + + D + F+ M + GI P+ T + LN
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 252 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 311
+HGF ++ G+ M V +GN++VDMY+K G IN A VF + + +ISWN +I G+ G
Sbjct: 129 IHGFCLKIGFEMM-VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 312 LASEAIEVFQMMEECN-EINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCL-C-FDV 368
S+A++ F MM+E N + P++ T S+L A S G + G +IH ++++ C
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 369 FVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDE 428
+ LVD+Y KCG + A F Q+ + + W+++I + G+ +A+ F+++ +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 429 GVRPDHITFVSLLTACSHSGLVSEGQRYFHM-MQEEFGIKPHLKHYGCMVDLFGRAGHLG 487
+ D S++ + L+ +G++ + ++ G++ + +VD++ + G +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVD 365
Query: 488 MAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 536
A M ++ D W ++ HG LG + +E+ N+
Sbjct: 366 EAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNI 410
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTS-GLRPDFYTFPPVLKACRN---LVDGKKIHCSVLK 56
MI+ +V G S+A+D F + RPD +T +LKAC + + GK+IH +++
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 57 LGFEW--DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEAL 114
GF + SL+ +Y + G ARK FD + + SW+++I GY Q G VEA+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 115 DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMY 174
+ ++ +D ++SI+ V A + G + VK V N++++MY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 175 AKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLV 234
K G++ A + F +M +DV+SW +I Y + + F M + I+PD + +
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 235 SLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV 294
++ S + + + ++ V VVD+ + G + A + + +P+
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 295 K-DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVG 347
K +V W TL++ +G EV +++ + NP YV + Y G
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSNLYGQAG 530
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/743 (33%), Positives = 404/743 (54%), Gaps = 72/743 (9%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 57
++ V +R G +AV+ F + SG + T +L+ C N +G++IH VL+L
Sbjct: 60 IVMVNLRSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL 118
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G E +V + SL+ MY R G ++RK+F+ M R+ SWN+++S Y + G +A+ +L
Sbjct: 119 GLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 118 DEMRLEGVSMDPIT-----------------------------------VASILPVCARS 142
DEM + G+ D +T ++S+L A
Sbjct: 179 DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 143 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 202
++ G IH YI+++ L ++++V LI+MY K G + +A VFD M +++V+WNS++
Sbjct: 239 GHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLV 298
Query: 203 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 262
+ + A M++ GI+PD +T SL S A L + V G + +G
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG-- 356
Query: 263 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQM 322
+V+SW + +G ++NG A++VF
Sbjct: 357 ------------------------------VAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 323 MEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCG 382
M+E + PN T ++L + L G ++H ++ L D +VAT LVDMYGK G
Sbjct: 387 MQE-EGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSG 445
Query: 383 RIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLT 442
+ A+ +F+ + S WN ++ + + G+G++ + F ML+ G+ PD ITF S+L+
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 443 ACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDA 502
C +SGLV EG +YF +M+ +GI P ++H CMVDL GR+G+L A +FIQ M ++PDA
Sbjct: 506 VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDA 565
Query: 503 SIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLA 562
+IWGA L +C+IH ++EL +A RL ++ N Y++M N+Y+N+ +WE V+ +R+L
Sbjct: 566 TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLM 625
Query: 563 RDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVL 622
R+ ++ WS I+++ V IFY +THP IY EL L ++MK GYVPD S +
Sbjct: 626 RNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIH 685
Query: 623 QDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITERE 682
QD+ + EKE +L H+E+LA+ +G+I +PI++ KN +C D H K++S + RE
Sbjct: 686 QDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNRE 745
Query: 683 IIVRDSNRFHHFKDGICSCGDYW 705
I++++ R HHF+DG CSC D W
Sbjct: 746 IVLQEGARVHHFRDGKCSCNDSW 768
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/680 (37%), Positives = 378/680 (55%), Gaps = 42/680 (6%)
Query: 59 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG---NAVEALD 115
F W+ +LL Y + GL + F+ +P RD +WN +I GY SG AV+A +
Sbjct: 73 FSWN-----NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 116 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYA 175
+ MR ++ +T+ ++L + + + ++ G IH ++K G E L V + L+ MYA
Sbjct: 128 TM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 176 KFGMMRHALRVFDQM------------------------------MERDVVSWNSIIAAY 205
G + A +VF + ME+D VSW ++I
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 206 EQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMED 265
Q+ A F M+ G++ D S+ L + +H I+R F +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDH 304
Query: 266 VIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEE 325
+ +G+A++DMY K ++ A VF+ + K+V+SW ++ GY Q G A EA+++F M+
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 326 CNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID 385
I+P+ T + A ++V +L +G + H + I + L V V+ LV +YGKCG ID
Sbjct: 365 SG-IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 386 DAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACS 445
D+ LF ++ +V W A++S + G+ + + F +M+ G++PD +T +++ACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 446 HSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIW 505
+GLV +GQRYF +M E+GI P + HY CM+DLF R+G L A FI MP PDA W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 506 GALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDR 565
LL ACR GN+E+G A++ L E+D + Y L+S+IYA+ GKW+ V ++R R++
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 566 GLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDV 625
+KK PG S I+ K+ F + + P ++IY +L L K+ GY PD SFV DV
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663
Query: 626 EEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIV 685
EE K +L HSERLAIAFG+I P PI++ KNLRVC DCHN TK IS +T REI+V
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723
Query: 686 RDSNRFHHFKDGICSCGDYW 705
RD+ RFH FKDG CSCGD+W
Sbjct: 724 RDAVRFHRFKDGTCSCGDFW 743
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 198/393 (50%), Gaps = 34/393 (8%)
Query: 47 GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLF---DDMPV------------ 91
GK+IH V+KLGFE + V + LL+MY G + A+K+F DD
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 92 ---------------RDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASIL 136
+DS SW AMI G Q+G A EA++ EM+++G+ MD S+L
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 137 PVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVV 196
P C I G IH I++ + +++V + LI+MY K + +A VFD+M +++VV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 197 SWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFI 256
SW +++ Y Q+ A F MQ++GI PD TL S A ++ HG
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 257 MRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEA 316
+ G + V + N++V +Y K G I+ + +F + V+D +SW +++ YAQ G A E
Sbjct: 398 ITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 317 IEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLV 375
I++F M + + + P+ T ++ A S G + +G + + + + +C++
Sbjct: 457 IQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 376 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 407
D++ + GR+++AM +P ++ W ++S
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 39/399 (9%)
Query: 163 NLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITA-HGFFTTM 221
NLF NNL+ Y+K G++ F+++ +RD V+WN +I Y S A + T M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 222 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 281
+ +TL+++ + + + +HG +++ G F +++G+ ++ MYA +G
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYANVGC 189
Query: 282 INSACAVFEGLP------------------------------VKDVISWNTLITGYAQNG 311
I+ A VF GL KD +SW +I G AQNG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 312 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 371
LA EAIE F+ M + + +Q + S+LPA +GA+ +G +IHA +I+ ++V
Sbjct: 250 LAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 372 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 431
+ L+DMY KC + A ++F ++ + + V W A++ +G G+ ++A+ F M G+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 432 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 491
PDH T ++AC++ + EG + FH G+ ++ +V L+G+ G + +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 492 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE 530
M VR DA W A++ A G AV + +LF+
Sbjct: 428 LFNEMNVR-DAVSWTAMVSAYAQFGR----AVETIQLFD 461
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 9/362 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLV---DGKKIHCSVLKL 57
MI + G EA++CF + + GL+ D Y F VL AC L +GK+IH +++
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKV-QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
F+ ++V ++L+ MYC+ + A+ +FD M ++ SW AM+ GY Q+G A EA+ I
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+M+ G+ D T+ + CA ++ G H + GL + VSN+L+ +Y K
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + + R+F++M RD VSW ++++AY Q + F M Q G++PD +TL +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KD 296
S ++ + + + + + ++D++++ G + A G+P D
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 297 VISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPA----YSHVGALRQG 352
I W TL++ G + + E + +P T +S + A + V LR+G
Sbjct: 540 AIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRG 599
Query: 353 IK 354
++
Sbjct: 600 MR 601
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 131/328 (39%), Gaps = 66/328 (20%)
Query: 244 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 303
N R + +HG I+R + E + N +V YA + A VF+ +P ++ SWN L
Sbjct: 20 NQSRYVKMIHGNIIRALPYPETFLYNN-IVHAYALMKSSTYARRVFDRIPQPNLFSWNNL 78
Query: 304 ITGYAQNGLASE-------------------------------AIEVFQMMEECNEINPN 332
+ Y++ GL SE A++ + M N
Sbjct: 79 LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 333 QGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK------------ 380
+ T +++L S G + G +IH +VIK + V + L+ MY
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 381 -------------------CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNF 421
CG I+DA+ LF + + SV W A+I +G +A+
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 422 FRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFG 481
FR+M +G++ D F S+L AC G ++EG++ H + H+ ++D++
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ-IHACIIRTNFQDHIYVGSALIDMYC 316
Query: 482 RAGHLGMAHNFIQNMPVRPDASIWGALL 509
+ L A M + S W A++
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVS-WTAMV 343
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/601 (38%), Positives = 362/601 (60%), Gaps = 7/601 (1%)
Query: 105 CQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNL 164
C + A+ +D ++ G+ D T + ++ C + + G LI ++ +G +
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 165 FVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA 224
F+ N LINMY KF ++ A ++FDQM +R+V+SW ++I+AY + A M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 225 GIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS 284
++P++ T +S++ N + R +H I++ G DV + +A++D++AKLG
Sbjct: 157 NVRPNVYTY---SSVLRSCNGMSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPED 212
Query: 285 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 344
A +VF+ + D I WN++I G+AQN + A+E+F+ M+ I Q T S+L A +
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACT 271
Query: 345 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 404
+ L G++ H ++K D+ + LVDMY KCG ++DA+ +F Q+ + W+
Sbjct: 272 GLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 405 IISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 464
+IS +G +AL F +M G +P++IT V +L ACSH+GL+ +G YF M++ +
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 465 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 524
GI P +HYGCM+DL G+AG L A + M PDA W LLGACR+ NM L A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 525 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 584
+ ++ +D E+ G Y L+SNIYAN KW+ V+E+R+ RDRG+KK PG S IEVN ++
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 585 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 644
F G+ +HP+ ++ +L L ++ +GYVP+ +FVLQD+E ++ E L HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569
Query: 645 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 704
FG+++ P + I+I KNLR+CGDCH + K S++ R I++RD R+HHF+DG CSCGDY
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 705 W 705
W
Sbjct: 630 W 630
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 206/389 (52%), Gaps = 14/389 (3%)
Query: 24 TSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLAN 80
+ GL D T+ ++K C R + +G I + G +F+ L++MY +F L N
Sbjct: 54 SHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLN 113
Query: 81 VARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCA 140
A +LFD MP R+ SW MIS Y + +AL++L M + V + T +S+L C
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 141 RSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNS 200
++ ++H I+K GLE ++FV + LI+++AK G AL VFD+M+ D + WNS
Sbjct: 174 GMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 201 IIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG 260
II + Q++ A F M++AG + TL S+ L H I++
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 261 WFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVF 320
+ +D+I+ NA+VDMY K G + A VF + +DVI+W+T+I+G AQNG + EA+++F
Sbjct: 289 -YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 347
Query: 321 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA--TCLVDMY 378
+ M+ PN T V +L A SH G L G + R +K D C++D+
Sbjct: 348 ERMKSSG-TKPNYITIVGVLFACSHAGLLEDGW-YYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 379 GKCGRIDDAMSLFYQVP-RSSSVPWNAII 406
GK G++DDA+ L ++ +V W ++
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 168/316 (53%), Gaps = 26/316 (8%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 60
MIS Y +C +A++ L +RP+ YT+ VL++C + D + +HC ++K G E
Sbjct: 133 MISAYSKCKIHQKALELLV-LMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE 191
Query: 61 WDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEM 120
DVFV ++L+ ++ + G A +FD+M D+ WN++I G+ Q+ + AL++ M
Sbjct: 192 SDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 121 RLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMM 180
+ G + T+ S+L C + G+ H++IVK+ + +L ++N L++MY K G +
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILNNALVDMYCKCGSL 309
Query: 181 RHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 240
ALRVF+QM ERDV++W+++I+ Q+ A F M+ +G +P+ +T IV
Sbjct: 310 EDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT------IV 363
Query: 241 AQLNDCRNSRSVHGFIMRRGWF----MEDVIIGNAV-------VDMYAKLGIINSACAVF 289
L C H ++ GW+ M+ + + V +D+ K G ++ A +
Sbjct: 364 GVLFACS-----HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 290 EGLPVK-DVISWNTLI 304
+ + D ++W TL+
Sbjct: 419 NEMECEPDAVTWRTLL 434
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 229/583 (39%), Positives = 349/583 (59%), Gaps = 6/583 (1%)
Query: 126 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 185
S+D V+S++ +I L+H +VK + F+ + L+ Y + G A +
Sbjct: 29 SLDA-NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEK 87
Query: 186 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM--QQAGIQPDLLTLVSLTSIVAQL 243
+FD+M ERD+VSWNS+I+ Y + M + G +P+ +T +S+ S
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 244 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 303
R +HG +M+ G +E+V + NA ++ Y K G + S+C +FE L +K+++SWNT+
Sbjct: 148 GSKEEGRCIHGLVMKFG-VLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 304 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 363
I + QNGLA + + F M P+Q T++++L + +G +R IH ++
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGH-EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 364 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 423
+ + T L+D+Y K GR++D+ ++F+++ S+ W A+++ + HG G A+ F
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 424 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 483
M+ G+ PDH+TF LL ACSHSGLV EG+ YF M + + I P L HY CMVDL GR+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 484 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 543
G L A+ I+ MP+ P + +WGALLGACR++ + +LG A++RLFE++ + YV++S
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 544 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 603
NIY+ G W+ +R+L + +GL + G S IE NK+ F G+ +HP+ EKI +L+
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Query: 604 NLTAKMKS-LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 662
+ KMKS +GY FVL DV ED KE ++ HSE++A+AFG++ P PI I KNL
Sbjct: 506 EIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNL 565
Query: 663 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
R+CGDCH K IS I +R II+RDS RFHHF DG CSC DYW
Sbjct: 566 RICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 218/449 (48%), Gaps = 9/449 (2%)
Query: 20 QFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA 79
Q + L + + +K+C ++ + +HC V+K F+ L+ Y R G
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 80 NVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDP--ITVASILP 137
A KLFD+MP RD SWN++ISGY G + ++L M + V P +T S++
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 138 VCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 197
C + G IH ++K G+ + V N IN Y K G + + ++F+ + +++VS
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 198 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIM 257
WN++I + Q+ +F ++ G +PD T +++ + R ++ +HG IM
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 258 RRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAI 317
G F + I A++D+Y+KLG + + VF + D ++W ++ YA +G +AI
Sbjct: 263 -FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 318 EVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFV--ATCLV 375
+ F++M I+P+ T+ +L A SH G + +G K + + D + +C+V
Sbjct: 322 KHFELMVHYG-ISPDHVTFTHLLNACSHSGLVEEG-KHYFETMSKRYRIDPRLDHYSCMV 379
Query: 376 DMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDH 434
D+ G+ G + DA L ++P SS W A++ ++ ++ + R D
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR-DG 438
Query: 435 ITFVSLLTACSHSGLVSEGQRYFHMMQEE 463
+V L S SGL + R ++M+++
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKL 57
MI ++++ G L+E ++ + G PD TF VL++C ++ + IH ++
Sbjct: 206 MIVIHLQNG-LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF + + +LL +Y + G + +F ++ DS +W AM++ Y G +A+
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGL-LIHLYIVKHGLEFNLFVSNNLINMYAK 176
+ M G+S D +T +L C+ S + G ++ ++ L + ++++ +
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 177 FGMMRHALRVFDQM-MERDVVSWNSIIAA 204
G+++ A + +M ME W +++ A
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/633 (37%), Positives = 366/633 (57%), Gaps = 9/633 (1%)
Query: 76 FGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASI 135
F L + + F P IS C +G EAL EM + G M ++
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDAL 58
Query: 136 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 195
L C + G +H +++K ++ L+ Y K + A +V D+M E++V
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 196 VSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGF 255
VSW ++I+ Y Q+ A F M ++ +P+ T ++ + + + + +HG
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 256 IMRRGW-FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLAS 314
I++ W + + +G++++DMYAK G I A +FE LP +DV+S +I GYAQ GL
Sbjct: 179 IVK--WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 315 EAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCL 374
EA+E+F + ++PN TY S+L A S + L G + H V++ L F + L
Sbjct: 237 EALEMFHRLHS-EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 375 VDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEG-VRPD 433
+DMY KCG + A LF +P +++ WNA++ + HG G + L FR M DE V+PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 434 HITFVSLLTACSHSGLVSEGQRYFH-MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNF 492
+T +++L+ CSH + G F M+ E+G KP +HYGC+VD+ GRAG + A F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 493 IQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKW 552
I+ MP +P A + G+LLGACR+H ++++G RL E++ EN G YV++SN+YA+ G+W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 553 EGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSL 612
V+ VR++ + + K PG S I+ + F+ +RTHP+ E++ +++ ++ KMK
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 613 GYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWT 672
GYVPD S VL DV+E++KE +L HSE+LA+ FG+I++ PI++FKNLR+C DCHN+
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 673 KFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
K S++ ERE+ +RD NRFH DGICSCGDYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 210/409 (51%), Gaps = 30/409 (7%)
Query: 2 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLG 58
IS GRL EA+ G F+ + +L AC R L DG+++H ++K
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMG----FHGYDALLNACLDKRALRDGQRVHAHMIKTR 82
Query: 59 FEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILD 118
+ ++ LL Y + ARK+ D+MP ++ SW AMIS Y Q+G++ EAL +
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 119 EMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFG 178
EM + T A++L C R+ + G IH IVK + ++FV ++L++MYAK G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 179 MMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTS 238
++ A +F+ + ERDVVS +IIA Y Q A F + G+ P+ +T SL +
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 239 IVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVI 298
++ L + + H ++RR ++ N+++DMY+K G ++ A +F+ +P + I
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFY-AVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321
Query: 299 SWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHAR 358
SWN ++ GY+++GL E +E+F++M + + P+ T +++L SH G+ I
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI--- 378
Query: 359 VIKNCLCFDVFVA------------TCLVDMYGKCGRIDDAMSLFYQVP 395
FD VA C+VDM G+ GRID+A ++P
Sbjct: 379 -------FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 179/364 (49%), Gaps = 31/364 (8%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
MIS Y + G SEA+ F + + G +P+ +TF VL +C L GK+IH ++K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
++ +FV +SLL MY + G AR++F+ +P RD S A+I+GY Q G EAL++
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+ EG+S + +T AS+L + + G H ++++ L F + N+LI+MY+K
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQ-QAGIQPDLLTLVSL 236
G + +A R+FD M ER +SWN+++ Y + F M+ + ++PD +TL+++
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 237 TSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG------------NAVVDMYAKLGIINS 284
L+ C HG + G + D ++ +VDM + G I+
Sbjct: 363 ------LSGCS-----HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 285 ACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP-NQGTYVSILPAY 343
A + +P K + G + L+ + E + EI P N G YV + Y
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE--SVGRRLIEIEPENAGNYVILSNLY 469
Query: 344 SHVG 347
+ G
Sbjct: 470 ASAG 473
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/602 (39%), Positives = 362/602 (60%), Gaps = 44/602 (7%)
Query: 141 RSDNILSGLLIHLYIVKHGLEFNL---FVSNNLINMYAKFGMMRHALRVFDQMMERDVVS 197
+S ++ L IH I++H L + ++ L YA G +RH+L +F Q ++ D+
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 198 WNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDC--RNSRSVHGF 255
+ + I + A + + + I P+ T SL L C ++ + +H
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSL------LKSCSTKSGKLIHTH 151
Query: 256 IMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-------------------- 295
+++ G + D + +VD+YAK G + SA VF+ +P +
Sbjct: 152 VLKFGLGI-DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 296 -----------DVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS 344
D++SWN +I GYAQ+G ++A+ +FQ + + P++ T V+ L A S
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 345 HVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNA 404
+GAL G IH V + + +V V T L+DMY KCG +++A+ +F PR V WNA
Sbjct: 271 QIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 405 IISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 463
+I+ + +HG AL F +M G++P ITF+ L AC+H+GLV+EG R F M +E
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 464 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 523
+GIKP ++HYGC+V L GRAG L A+ I+NM + D+ +W ++LG+C++HG+ LG
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Query: 524 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 583
++ L ++ +N G YVL+SNIYA+VG +EGV +VR+L +++G+ K PG S+IE+ NKV
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
Query: 584 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 643
F G+R H K ++IY LR ++ ++KS GYVP+ + VLQD+EE EKE L HSERLAI
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAI 570
Query: 644 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 703
A+G+IS+ P SP++IFKNLRVC DCH TK IS+IT R+I++RD NRFHHF DG CSCGD
Sbjct: 571 AYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD 630
Query: 704 YW 705
+W
Sbjct: 631 FW 632
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 156/323 (48%), Gaps = 39/323 (12%)
Query: 125 VSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHAL 184
++ + T +S+L C+ SG LIH +++K GL + +V+ L+++YAK G + A
Sbjct: 126 INPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 185 RVFDQ-------------------------------MMERDVVSWNSIIAAYEQSNDPIT 213
+VFD+ M ERD+VSWN +I Y Q P
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 214 AHGFFTTMQQAGI-QPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 272
A F + G +PD +T+V+ S +Q+ R +H F+ + +V + +
Sbjct: 242 ALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV-KSSRIRLNVKVCTGL 300
Query: 273 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 332
+DMY+K G + A VF P KD+++WN +I GYA +G + +A+ +F M+ + P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 333 QGTYVSILPAYSHVGALRQGIKIHARVIKN-CLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
T++ L A +H G + +GI+I + + + + CLV + G+ G++ A
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 392 YQVPR-SSSVPWNAIISCHGIHG 413
+ + SV W++++ +HG
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHG 443
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 34/250 (13%)
Query: 18 FYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFG 77
Y L+S + P+ +TF +LK+C + GK IH VLK G D +VA L+ +Y + G
Sbjct: 117 LYVQLLSSEINPNEFTFSSLLKSC-STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGG 175
Query: 78 LANVARKLFDDMPVR-------------------------------DSGSWNAMISGYCQ 106
A+K+FD MP R D SWN MI GY Q
Sbjct: 176 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 107 SGNAVEALDILDEMRLEGVSM-DPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 165
G +AL + ++ EG D ITV + L C++ + +G IH+++ + N+
Sbjct: 236 HGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK 295
Query: 166 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ-A 224
V LI+MY+K G + A+ VF+ +D+V+WN++IA Y A F MQ
Sbjct: 296 VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGIT 355
Query: 225 GIQPDLLTLV 234
G+QP +T +
Sbjct: 356 GLQPTDITFI 365
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 17/275 (6%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN---LVDGKKIHCSVLKL 57
MI Y + G ++A+ F + +PD T L AC L G+ IH V
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
+V V L+ MY + G A +F+D P +D +WNAMI+GY G + +AL +
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 118 DEMR-LEGVSMDPITVASILPVCARSDNILSGLLIHLYI-VKHGLEFNLFVSNNLINMYA 175
+EM+ + G+ IT L CA + + G+ I + ++G++ + L+++
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 176 KFGMMRHALRVFDQM-MERDVVSWNSIIAAYEQSND-----PITAHGFFTTMQQAGIQPD 229
+ G ++ A M M+ D V W+S++ + + D I + ++ +GI
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI--- 465
Query: 230 LLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFME 264
V L++I A + D V + +G E
Sbjct: 466 ---YVLLSNIYASVGDYEGVAKVRNLMKEKGIVKE 497
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/574 (39%), Positives = 348/574 (60%), Gaps = 2/574 (0%)
Query: 132 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 191
V IL +CAR+ ++ H I++ LE ++ + N LIN Y+K G + A +VFD M+
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 192 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 251
ER +VSWN++I Y ++ A F M+ G + T+ S+ S D +
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 252 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 311
+H ++ + ++ +G A++D+YAK G+I A VFE + K ++W++++ GY QN
Sbjct: 184 LHCLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 312 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 371
EA+ +++ + + + NQ T S++ A S++ AL +G ++HA + K+ +VFVA
Sbjct: 243 NYEEALLLYRRAQRMS-LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 372 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 431
+ VDMY KCG + ++ +F +V + WN IIS H + + + F +M +G+
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 432 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 491
P+ +TF SLL+ C H+GLV EG+R+F +M+ +G+ P++ HY CMVD+ GRAG L A+
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 492 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 551
I+++P P ASIWG+LL +CR++ N+EL VA+++LFE++ EN G +VL+SNIYA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 552 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 611
WE + + R L RD +KK G S I++ +KV F G HP+ +I L NL K +
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541
Query: 612 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 671
GY P L DVE +KE +L HSE+LA+ FG++ P SP++I KNLR+C DCH +
Sbjct: 542 FGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEF 601
Query: 672 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
K S T R IIVRD NRFHHF DG CSCGD+W
Sbjct: 602 MKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 208/377 (55%), Gaps = 9/377 (2%)
Query: 37 VLKAC-RN--LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 93
+L+ C RN +++ K H ++++ E DV + L++ Y + G +AR++FD M R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 94 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 153
SWN MI Y ++ EALDI EMR EG T++S+L C + + L +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 154 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPIT 213
VK ++ NL+V L+++YAK GM++ A++VF+ M ++ V+W+S++A Y Q+ +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 214 AHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVV 273
A + Q+ ++ + TL S+ + L + +H I + G F +V + ++ V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAV 305
Query: 274 DMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQ 333
DMYAK G + + +F + K++ WNT+I+G+A++ E + +F+ M++ + ++PN+
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNE 364
Query: 334 GTYVSILPAYSHVGALRQGIKIHARVIKNC--LCFDVFVATCLVDMYGKCGRIDDAMSLF 391
T+ S+L H G + +G + ++++ L +V +C+VD+ G+ G + +A L
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 392 YQVPRSSSVP-WNAIIS 407
+P + W ++++
Sbjct: 424 KSIPFDPTASIWGSLLA 440
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 332 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
N+ IL + GA+ + H ++I+ L DV + L++ Y KCG ++ A +F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 392 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 451
+ S V WN +I + + +AL+ F +M +EG + T S+L+AC +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 452 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 511
E ++ H + + I +L ++DL+ + G + A ++M + + W +++
Sbjct: 180 ECKK-LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
Query: 512 CRIHGNME 519
+ N E
Sbjct: 238 YVQNKNYE 245
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/662 (37%), Positives = 374/662 (56%), Gaps = 5/662 (0%)
Query: 47 GKKIHCSVLK-LGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYC 105
G+ +H ++K L F+A L++MY + AR + P R+ SW ++ISG
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 106 QSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLF 165
Q+G+ AL EMR EGV + T A ++G IH VK G ++F
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 166 VSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG 225
V + +MY K + A ++FD++ ER++ +WN+ I+ P A F ++
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 226 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 285
P+ +T + + + +HG ++R G F DV + N ++D Y K I S+
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 286 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 345
+F + K+ +SW +L+ Y QN E V + + + + S+L A +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 346 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 405
+ L G IHA +K C+ +FV + LVDMYGKCG I+D+ F ++P + V N++
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 406 ISCHGIHGQGDKALNFFRQMLDEGV--RPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE 463
I + GQ D AL F +M G P+++TFVSLL+ACS +G V G + F M+
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 464 FGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAV 523
+GI+P +HY C+VD+ GRAG + A+ FI+ MP++P S+WGAL ACR+HG +LG +
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL 502
Query: 524 ASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVD 583
A++ LF++D ++ G +VL+SN +A G+W + VR + G+KK G+S I V N+V
Sbjct: 503 AAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVH 562
Query: 584 IFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAI 643
F +R+H ++I L L +M++ GY PD L D+EE+EK ++ HSE+LA+
Sbjct: 563 AFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLAL 622
Query: 644 AFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGD 703
AFG++S P PI+I KNLR+CGDCH++ KF+S +REIIVRD+NRFH FKDGICSC D
Sbjct: 623 AFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKD 682
Query: 704 YW 705
YW
Sbjct: 683 YW 684
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 228/464 (49%), Gaps = 36/464 (7%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKL 57
+IS + G S A+ F++ G+ P+ +TFP KA +L V GK+IH +K
Sbjct: 79 LISGLAQNGHFSTALVEFFEMR-REGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G DVFV S MYC+ L + ARKLFD++P R+ +WNA IS G EA++
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
E R + IT + L C+ ++ G+ +H +++ G + ++ V N LI+ Y K
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
+R + +F +M ++ VSW S++AAY Q+++ A + ++ ++ + S+
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
S A + RS+H + + + +G+A+VDMY K G I + F+ +P K++
Sbjct: 318 SACAGMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEE--CNEINPNQGTYVSILPAYSHVGALRQGIKI 355
++ N+LI GYA G A+ +F+ M C PN T+VS+L A S GA+ G+KI
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP-TPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 356 HARVIKNCLCFDVFVAT-----------CLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WN 403
FD +T C+VDM G+ G ++ A ++P ++ W
Sbjct: 436 ----------FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 404 AIISCHGIHGQGDKAL----NFFRQMLDEGVRPDHITFVSLLTA 443
A+ + +HG+ L N F+ LD +H+ + A
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFK--LDPKDSGNHVLLSNTFAA 527
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 397/713 (55%), Gaps = 50/713 (7%)
Query: 2 ISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFEW 61
+++Y +CGRLS A FY S P+ +++ ++KA KIH
Sbjct: 50 VNLYSKCGRLSYARAAFY-----STEEPNVFSYNVIVKA---YAKDSKIH---------- 91
Query: 62 DVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMR 121
+AR+LFD++P D+ S+N +ISGY + A+ + MR
Sbjct: 92 -------------------IARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 122 LEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMR 181
G +D T++ ++ C +++ L H + V G + V+N + Y+K G++R
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLIKQL--HCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 182 HALRVFDQMME-RDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV 240
A+ VF M E RD VSWNS+I AY Q + A + M G + D+ TL S+ + +
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 241 AQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINS---ACAVFEGLPVKDV 297
L+ R HG +++ G F ++ +G+ ++D Y+K G + + VF+ + D+
Sbjct: 251 TSLDHLIGGRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 298 ISWNTLITGYAQNG-LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIH 356
+ WNT+I+GY+ N L+ EA++ F+ M+ P+ ++V + A S++ + Q +IH
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 357 ARVIKNCLCFD-VFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQG 415
IK+ + + + V L+ +Y K G + DA +F ++P ++V +N +I + HG G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 416 DKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGC 475
+AL +++MLD G+ P+ ITFV++L+AC+H G V EGQ YF+ M+E F I+P +HY C
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSC 488
Query: 476 MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSEN 535
M+DL GRAG L A FI MP +P + W ALLGACR H NM L A++ L +
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA 548
Query: 536 VGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKY 595
YV+++N+YA+ KWE + VR R + ++K PG S IEV K +F + +HP
Sbjct: 549 ATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 596 EKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHI---LTSHSERLAIAFGIISSPP 652
++ + L + KMK +GYV DK + + +E + L HSE+LA+AFG++S+
Sbjct: 609 REVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRD 668
Query: 653 KSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+ + KNLR+CGDCHN KF+S + REIIVRD+ RFH FKDG CSCGDYW
Sbjct: 669 GEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 215/491 (43%), Gaps = 88/491 (17%)
Query: 144 NILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRH--------------------- 182
++ +G +H VK + + ++SN+ +N+Y+K G + +
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVK 82
Query: 183 ----------ALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLT 232
A ++FD++ + D VS+N++I+ Y + + A F M++ G + D T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 233 LVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGL 292
L L I A + + +H F + G F + NA V Y+K G++ A +VF G+
Sbjct: 143 LSGL--IAACCDRVDLIKQLHCFSVSGG-FDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 293 -PVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQ 351
++D +SWN++I Y Q+ ++A+ +++ M + T S+L A + + L
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 352 GIKIHARVIKNCLCFDVFVATCLVDMYGKCGRID---DAMSLFYQVPRSSSVPWNAIISC 408
G + H ++IK + V + L+D Y KCG D D+ +F ++ V WN +IS
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 409 HGIHGQ-GDKALNFFRQMLDEGVRPDHITFVSLLTACSH--------------------- 446
+ ++ + ++A+ FRQM G RPD +FV + +ACS+
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 447 ---------------SGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 491
SG + + + F M E + + CM+ + + GH A
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS-----FNCMIKGYAQHGHGTEALL 433
Query: 492 FIQNM---PVRPDASIWGALLGACRIHGNMELGAVASDRL---FEVDSENVGYYVLMSNI 545
Q M + P+ + A+L AC G ++ G + + F+++ E +Y M ++
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE-AEHYSCMIDL 492
Query: 546 YANVGKWEGVD 556
GK E +
Sbjct: 493 LGRAGKLEEAE 503
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 1 MISVYVRCGRLSE-AVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDG---KKIHCSVLK 56
MIS Y LSE AV F Q G RPD +F V AC NL K+IH +K
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIK 373
Query: 57 LGFEWD-VFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALD 115
+ + V +L+ +Y + G AR +FD MP ++ S+N MI GY Q G+ EAL
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 116 ILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNN--LINM 173
+ M G++ + IT ++L CA + G + +K + + +I++
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNTMKETFKIEPEAEHYSCMIDL 492
Query: 174 YAKFGMMRHALRVFDQM-MERDVVSWNSIIAA 204
+ G + A R D M + V+W +++ A
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL--VDGKKIHCSVLKLG 58
MI Y + G +EA+ YQ L SG+ P+ TF VL AC + VD + + + +K
Sbjct: 418 MIKGYAQHGHGTEAL-LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476
Query: 59 F--EWDVFVAASLLHMYCRFGLANVARKLFDDMPVR-DSGSWNAMISGYCQ 106
F E + + ++ + R G A + D MP + S +W A++ G C+
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL-GACR 526
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/617 (36%), Positives = 364/617 (58%), Gaps = 16/617 (2%)
Query: 94 SGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHL 153
S WN + E++ + M G S D + IL CA +SG +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 154 YIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVS--WNSIIAAYEQSNDP 211
++ K G E FV LI+MY K G++ A +VF++ + +S +N++I+ Y ++
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 212 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 271
A F M++ G+ D +T++ L + RS+HG ++ G +V + N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNS 196
Query: 272 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 331
+ MY K G + + +F+ +PVK +I+WN +I+GY+QNGLA + +E+++ M+ + P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCP 255
Query: 332 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
+ T VS+L + +H+GA + G ++ V N +VFV+ + MY +CG + A ++F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 392 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 451
+P S V W A+I C+G+HG G+ L F M+ G+RPD FV +L+ACSHSGL
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 452 EGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGA 511
+G F M+ E+ ++P +HY C+VDL GRAG L A FI++MPV PD ++WGALLGA
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 512 CRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTP 571
C+IH N+++ +A ++ E + N+GYYVLMSNIY++ EG+ +R + R+R +K P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 572 GWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKE 631
G+S +E +V +F G+R+H + E+++ L L + L +++ D E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA---------GNMDCDRGE 546
Query: 632 HILTS---HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDS 688
+ ++ HSERLAIAFGI++S P + I + KNLRVC DCH + K +S+I +R+ +VRD+
Sbjct: 547 EVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDA 606
Query: 689 NRFHHFKDGICSCGDYW 705
+RFH+FKDG+CSC DYW
Sbjct: 607 SRFHYFKDGVCSCKDYW 623
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 249/477 (52%), Gaps = 19/477 (3%)
Query: 11 LSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKLGFEWDVFVAA 67
SE++ Y+ L SG PD ++FP +LK+C +L V G+++HC V K G E + FV
Sbjct: 34 FSESIS-LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLT 92
Query: 68 SLLHMYCRFGLANVARKLFDDMPVRDSGS--WNAMISGYCQSGNAVEALDILDEMRLEGV 125
+L+ MYC+ GL ARK+F++ P S +NA+ISGY + +A + M+ GV
Sbjct: 93 ALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV 152
Query: 126 SMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALR 185
S+D +T+ ++P+C + + G +H VK GL+ + V N+ I MY K G + R
Sbjct: 153 SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 186 VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLND 245
+FD+M + +++WN++I+ Y Q+ + M+ +G+ PD TLVS+ S A L
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 246 CRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLIT 305
+ V + G F+ +V + NA + MYA+ G + A AVF+ +PVK ++SW +I
Sbjct: 273 KKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 306 GYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLC 365
Y +G+ + +F M + I P+ +V +L A SH G +G+++ R +K
Sbjct: 332 CYGMHGMGEIGLMLFDDMIK-RGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYK 389
Query: 366 FDVFVA--TCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIISCHGIHGQGDKALNFF 422
+ +CLVD+ G+ GR+D+AM +P W A++ IH D A F
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 423 RQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEE--FGIKP---HLKHYG 474
++++ P++I + L++ EG +M E F KP +++H G
Sbjct: 450 AKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 155/315 (49%), Gaps = 19/315 (6%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKL 57
+IS Y ++++A F + T G+ D T ++ C L G+ +H +K
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKET-GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG 185
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + +V V S + MY + G R+LFD+MPV+ +WNA+ISGY Q+G A + L++
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
++M+ GV DP T+ S+L CA G + + +G N+FVSN I+MYA+
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G + A VFD M + +VSW ++I Y F M + GI+PD V +
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
Query: 238 SIVAQ--LNDCRNSRSVHGF-IMRRGWFMEDVIIG----NAVVDMYAKLGIINSACAVFE 290
S + L D + + F M+R + +E G + +VD+ + G ++ A E
Sbjct: 366 SACSHSGLTD----KGLELFRAMKREYKLEP---GPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 291 GLPVK-DVISWNTLI 304
+PV+ D W L+
Sbjct: 419 SMPVEPDGAVWGALL 433
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 368/601 (61%), Gaps = 28/601 (4%)
Query: 127 MDPITVASIL--PVCARSDNILSGL---------LIHLYIVKHGLEFNLFVSNNLINMYA 175
M P + S+L P+ + N+L IH + ++HG+ +S+ + +
Sbjct: 1 MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVS----ISDAELGKHL 56
Query: 176 KFGM--------MRHALRVFDQMMER-DVVSWNSIIAAYEQSNDPITAHGFFTTMQQAG- 225
F + M +A +VF ++ + +V WN++I Y + + I+A + M+ +G
Sbjct: 57 IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL 116
Query: 226 IQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSA 285
++PD T L V + D R ++H ++R G F + + N+++ +YA G + SA
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCGDVASA 175
Query: 286 CAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSH 345
VF+ +P KD+++WN++I G+A+NG EA+ ++ M I P+ T VS+L A +
Sbjct: 176 YKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAK 234
Query: 346 VGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAI 405
+GAL G ++H +IK L ++ + L+D+Y +CGR+++A +LF ++ +SV W ++
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 406 ISCHGIHGQGDKALNFFRQMLD-EGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEF 464
I ++G G +A+ F+ M EG+ P ITFV +L ACSH G+V EG YF M+EE+
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 465 GIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVA 524
I+P ++H+GCMVDL RAG + A+ +I++MP++P+ IW LLGAC +HG+ +L A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 525 SDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDI 584
++ +++ + G YVL+SN+YA+ +W V ++R G+KK PG S +EV N+V
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 585 FYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIA 644
F G+++HP+ + IY +L+ +T +++S GYVP S V DVEE+EKE+ + HSE++AIA
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534
Query: 645 FGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDY 704
F +IS+P +SPI + KNLRVC DCH K +S++ REI+VRD +RFHHFK+G CSC DY
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Query: 705 W 705
W
Sbjct: 595 W 595
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 185/342 (54%), Gaps = 8/342 (2%)
Query: 97 WNAMISGYCQSGNAVEALDILDEMRLEG-VSMDPITVASILPVCARSDNILSGLLIHLYI 155
WN +I GY + GN++ A + EMR+ G V D T ++ ++ G IH +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 156 VKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAH 215
++ G ++V N+L+++YA G + A +VFD+M E+D+V+WNS+I + ++ P A
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 216 GFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDM 275
+T M GI+PD T+VSL S A++ + VH ++++ G ++ N ++D+
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG-LTRNLHSSNVLLDL 266
Query: 276 YAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGT 335
YA+ G + A +F+ + K+ +SW +LI G A NG EAIE+F+ ME + P + T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 336 YVSILPAYSHVGALRQGIKIHARVIKNC-LCFDVFVATCLVDMYGKCGRIDDAMSLFYQV 394
+V IL A SH G +++G + R+ + + + C+VD+ + G++ A +
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 395 P-RSSSVPWNAIISCHGIHGQGDKALNFFR-QMLDEGVRPDH 434
P + + V W ++ +HG D A F R Q+L + P+H
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLA-EFARIQILQ--LEPNH 425
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 184/360 (51%), Gaps = 29/360 (8%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I Y G A + + ++ + PD +T+P ++KA + D G+ IH V++
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF ++V SLLH+Y G A K+FD MP +D +WN++I+G+ ++G EAL +
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
EM +G+ D T+ S+L CA+ + G +H+Y++K GL NL SN L+++YA+
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQA-GIQPDLLTLVSL 236
G + A +FD+M++++ VSW S+I + A F M+ G+ P +T V +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 237 TSIVAQLNDCRNSRSV-HGF----IMRRGWFMEDVIIG-NAVVDMYAKLGIINSACAVFE 290
L C + V GF MR + +E I +VD+ A+ G + A +
Sbjct: 331 ------LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 384
Query: 291 GLPVK-DVISWNTLI---TGYAQNGLASEA-IEVFQMMEECNEINPNQ-GTYVSILPAYS 344
+P++ +V+ W TL+ T + + LA A I++ Q+ PN G YV + Y+
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL-------EPNHSGDYVLLSNMYA 437
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 245/625 (39%), Positives = 347/625 (55%), Gaps = 81/625 (12%)
Query: 82 ARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCAR 141
A +LFD++P D+ S+N M+S Y ++ N +A D M P A+
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM--------PFKDAASW----- 158
Query: 142 SDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSI 201
N +I YA+ G M A +F MME++ VSWN++
Sbjct: 159 --------------------------NTMITGYARRGEMEKARELFYSMMEKNEVSWNAM 192
Query: 202 IAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW 261
I+ Y + D A FF G
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRG------------------------------------ 216
Query: 262 FMEDVIIGNAVVDMYAKLGIINSACAVFEGLPV-KDVISWNTLITGYAQNGLASEAIEVF 320
V+ A++ Y K + A A+F+ + V K++++WN +I+GY +N + +++F
Sbjct: 217 ----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 321 QMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGK 380
+ M E I PN S L S + AL+ G +IH V K+ LC DV T L+ MY K
Sbjct: 273 RAMLE-EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 381 CGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSL 440
CG + DA LF + + V WNA+IS + HG DKAL FR+M+D +RPD ITFV++
Sbjct: 332 CGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Query: 441 LTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRP 500
L AC+H+GLV+ G YF M ++ ++P HY CMVDL GRAG L A I++MP RP
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRP 451
Query: 501 DASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRS 560
A+++G LLGACR+H N+EL A+++L +++S+N YV ++NIYA+ +WE V VR
Sbjct: 452 HAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRK 511
Query: 561 LARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSF 620
++ + K PG+S IE+ NKV F + +R HP+ + I+ +L+ L KMK GY P+ F
Sbjct: 512 RMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEF 571
Query: 621 VLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITE 680
L +VEE++KE +L HSE+LA+AFG I P S IQ+FKNLR+CGDCH KFIS+I +
Sbjct: 572 ALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEK 631
Query: 681 REIIVRDSNRFHHFKDGICSCGDYW 705
REIIVRD+ RFHHFKDG CSCGDYW
Sbjct: 632 REIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 174/342 (50%), Gaps = 20/342 (5%)
Query: 60 EWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDE 119
E D F +L Y R A+ FD MP +D+ SWN MI+GY + G +A ++
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 120 MRLEGVSMDPITVASILPVCARSDNILSGLLIHL-YIVKHGLEFNLFVSNNLINMYAKFG 178
M + + ++ +++ S I G L + K + +I Y K
Sbjct: 181 M----MEKNEVSWNAMI-----SGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 179 MMRHALRVF-DQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
+ A +F D + +++V+WN++I+ Y +++ P F M + GI+P+ L S
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
++L+ + R +H I+ + DV +++ MY K G + A +FE + KDV
Sbjct: 292 LGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
++WN +I+GYAQ+G A +A+ +F+ M + N+I P+ T+V++L A +H G + G+
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 358 RVIKNCLCFDVFVA----TCLVDMYGKCGRIDDAMSLFYQVP 395
++++ + V TC+VD+ G+ G++++A+ L +P
Sbjct: 410 SMVRD---YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 7/237 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 60
MI+ Y R G + +A + FY S + + ++ ++ D +K K+
Sbjct: 161 MITGYARRGEMEKARELFY-----SMMEKNEVSWNAMISGYIECGDLEKA-SHFFKVAPV 214
Query: 61 WDVFVAASLLHMYCRFGLANVARKLFDDMPV-RDSGSWNAMISGYCQSGNAVEALDILDE 119
V +++ Y + +A +F DM V ++ +WNAMISGY ++ + L +
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 120 MRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGM 179
M EG+ + ++S L C+ + G IH + K L ++ +LI+MY K G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 180 MRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSL 236
+ A ++F+ M ++DVV+WN++I+ Y Q + A F M I+PD +T V++
Sbjct: 335 LGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 391
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
MIS YV R + + F + L G+RP+ L C L G++IH V K
Sbjct: 255 MISGYVENSRPEDGLKLF-RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
DV SL+ MYC+ G A KLF+ M +D +WNAMISGY Q GNA +AL +
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAK 176
EM + D IT ++L C + + G+ +V+ + +E ++++ +
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 177 FGMMRHALRVFDQM 190
G + AL++ M
Sbjct: 434 AGKLEEALKLIRSM 447
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 65/309 (21%)
Query: 270 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEI 329
N ++ + G I+ A VF G+ K+ I+WN+L+ G +++ S +E Q+ +E E
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEAHQLFDEIPE- 121
Query: 330 NPNQGTYVSILPAYSH--------------------------VGALRQGIKIHARVI--- 360
P+ +Y +L Y G R+G AR +
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 361 ---KNCLCFDVFVA--------------------------TCLVDMYGKCGRIDDAMSLF 391
KN + ++ ++ T ++ Y K +++ A ++F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 392 YQVPRSSS-VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLV 450
+ + + V WNA+IS + + + + L FR ML+EG+RP+ S L CS +
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 451 SEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLG 510
G R H + + + + ++ ++ + G LG A + M + D W A++
Sbjct: 301 QLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMIS 358
Query: 511 ACRIHGNME 519
HGN +
Sbjct: 359 GYAQHGNAD 367
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHCSVLKLGFE 60
MIS Y + G +A+ C ++ + + +RPD+ TF VL AC H ++ +G
Sbjct: 356 MISGYAQHGNADKAL-CLFREMIDNKIRPDWITFVAVLLACN--------HAGLVNIGMA 406
Query: 61 W------DVFVAASLLHMYC------RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSG 108
+ D V H C R G A KL MP R + + G C+
Sbjct: 407 YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Query: 109 NAVEALDILDEMRLE 123
VE + E L+
Sbjct: 467 KNVELAEFAAEKLLQ 481
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/659 (35%), Positives = 372/659 (56%), Gaps = 4/659 (0%)
Query: 48 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 107
K+IH S++ D F+ LL F + LF + +N++I+G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 108 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 167
E LD+ +R G+ + T +L C R+ + G+ +H +VK G ++
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 168 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 227
+L+++Y+ G + A ++FD++ +R VV+W ++ + Y S A F M + G++
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 228 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 287
PD +V + S + D + + + M ++ + +V++YAK G + A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKY-MEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 288 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVF-QMMEECNEINPNQGTYVSILPAYSHV 346
VF+ + KD+++W+T+I GYA N E IE+F QM++E + P+Q + V L + + +
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE--NLKPDQFSIVGFLSSCASL 326
Query: 347 GALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAII 406
GAL G + + ++ ++F+A L+DMY KCG + +F ++ V NA I
Sbjct: 327 GALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAI 386
Query: 407 SCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGI 466
S +G + F Q G+ PD TF+ LL C H+GL+ +G R+F+ + + +
Sbjct: 387 SGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYAL 446
Query: 467 KPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASD 526
K ++HYGCMVDL+GRAG L A+ I +MP+RP+A +WGALL CR+ + +L
Sbjct: 447 KRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLK 506
Query: 527 RLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFY 586
L ++ N G YV +SNIY+ G+W+ EVR + +G+KK PG+S IE+ KV F
Sbjct: 507 ELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFL 566
Query: 587 TGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFG 646
+++HP +KIY +L +L +M+ +G+VP FV DVEE+EKE +L HSE+LA+A G
Sbjct: 567 ADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALG 626
Query: 647 IISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
+IS+ I++ KNLRVCGDCH K IS+IT REI+VRD+NRFH F +G CSC DYW
Sbjct: 627 LISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 209/412 (50%), Gaps = 8/412 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKL 57
+I+ +V E +D F GL +TFP VLKAC G +H V+K
Sbjct: 82 LINGFVNNHLFHETLDLFLSIR-KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF DV SLL +Y G N A KLFD++P R +W A+ SGY SG EA+D+
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
+M GV D + +L C ++ SG I Y+ + ++ N FV L+N+YAK
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G M A VFD M+E+D+V+W+++I Y ++ P F M Q ++PD ++V
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
S A L I R F+ ++ + NA++DMYAK G + VF+ + KD+
Sbjct: 321 SSCASLGALDLGEWGISLIDRHE-FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIK-IH 356
+ N I+G A+NG + VF E+ I+P+ T++ +L H G ++ G++ +
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLG-ISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 357 ARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVPWNAIIS 407
A L V C+VD++G+ G +DDA L +P R +++ W A++S
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/559 (39%), Positives = 344/559 (61%), Gaps = 8/559 (1%)
Query: 151 IHLYIVKHGL-EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSN 209
IH +++ G E N ++ L N+ G M +A +VFD+M + + WN++ Y ++
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 210 DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIG 269
P + + M+ G++PD T + ++QL D ++H +++ G F I+
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG-FGCLGIVA 147
Query: 270 NAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEEC-NE 328
+V MY K G ++SA +FE + VKD+++WN + Q G ++ A+E F M C +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM--CADA 205
Query: 329 INPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAM 388
+ + T VS+L A +G+L G +I+ R K + ++ V +DM+ KCG + A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 389 SLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSG 448
LF ++ + + V W+ +I + ++G +AL F M +EG+RP+++TF+ +L+ACSH+G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 449 LVSEGQRYFHMMQE--EFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWG 506
LV+EG+RYF +M + + ++P +HY CMVDL GR+G L A+ FI+ MPV PD IWG
Sbjct: 326 LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 507 ALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRG 566
ALLGAC +H +M LG +D L E + Y+VL+SNIYA GKW+ VD+VRS R G
Sbjct: 386 ALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 567 LKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVE 626
KK +SS+E K+ F G+++HP+ + IY++L + K++ +GYVPD V DVE
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVE 505
Query: 627 EDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVR 686
+EKE L+ HSE+LAIAFG+I P PI++ KNLR C DCH ++KF+S +T EII+R
Sbjct: 506 MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMR 565
Query: 687 DSNRFHHFKDGICSCGDYW 705
D NRFHHF++G+CSC ++W
Sbjct: 566 DKNRFHHFRNGVCSCKEFW 584
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 10/371 (2%)
Query: 48 KKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQS 107
KKIH VL+ GF + LL G AR++FD+M WN + GY ++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 108 GNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVS 167
E+L + +MR GV D T ++ ++ + G +H ++VK+G V+
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 168 NNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQ 227
L+ MY KFG + A +F+ M +D+V+WN+ +A Q+ + A +F M +Q
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 228 PDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACA 287
D T+VS+ S QL ++ R+ ++I+ NA +DM+ K G +A
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYD-RARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 288 VFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNE-INPNQGTYVSILPAYSHV 346
+FE + ++V+SW+T+I GYA NG + EA+ +F M+ NE + PN T++ +L A SH
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ--NEGLRPNYVTFLGVLSACSHA 324
Query: 347 GALRQGIKIHARVI----KNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 401
G + +G + + ++ KN A C+VD+ G+ G +++A ++P +
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYA-CMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 402 WNAIISCHGIH 412
W A++ +H
Sbjct: 384 WGALLGACAVH 394
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 149/289 (51%), Gaps = 6/289 (2%)
Query: 26 GLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVA 82
G+RPD +T+P V+KA L D G +H V+K GF VA L+ MY +FG + A
Sbjct: 104 GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSA 163
Query: 83 RKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARS 142
LF+ M V+D +WNA ++ Q+GN+ AL+ ++M + V D TV S+L C +
Sbjct: 164 EFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQL 223
Query: 143 DNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII 202
++ G I+ K ++ N+ V N ++M+ K G A +F++M +R+VVSW+++I
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMI 283
Query: 203 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRG-W 261
Y + D A FTTMQ G++P+ +T + + S + + +++
Sbjct: 284 VGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK 343
Query: 262 FMEDVIIGNA-VVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYA 308
+E A +VD+ + G++ A + +PV+ D W L+ A
Sbjct: 344 NLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/620 (38%), Positives = 374/620 (60%), Gaps = 7/620 (1%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRN--LVD-GKKIHCSVLKL 57
M++ Y +CG L + F + + P+ TF VL C + L+D G ++H V+
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQ-ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G +++ + SLL MY + G + A KLF M D+ +WN MISGY QSG E+L
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
EM GV D IT +S+LP ++ +N+ IH YI++H + ++F+++ LI+ Y K
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
+ A +F Q DVV + ++I+ Y + I + F + + I P+ +TLVS+
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
++ L + R +HGFI+++G F IG AV+DMYAK G +N A +FE L +D+
Sbjct: 449 PVIGILLALKLGRELHGFIIKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI 507
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
+SWN++IT AQ+ S AI++F+ M + I + + + L A +++ + G IH
Sbjct: 508 VSWNSMITRCAQSDNPSAAIDIFRQMG-VSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+IK+ L DV+ + L+DMY KCG + AM++F + + V WN+II+ G HG+
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 418 ALNFFRQMLDE-GVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCM 476
+L F +M+++ G+RPD ITF+ ++++C H G V EG R+F M E++GI+P +HY C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 477 VDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENV 536
VDLFGRAG L A+ +++MP PDA +WG LLGACR+H N+EL VAS +L ++D N
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 537 GYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYE 596
GYYVL+SN +AN +WE V +VRSL ++R ++K PG+S IE+N + +F +G+ HP+
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Query: 597 KIYDELRNLTAKMKSLGYVP 616
IY L +L +++ GY+P
Sbjct: 807 HIYSLLNSLLGELRLEGYIP 826
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 319/625 (51%), Gaps = 30/625 (4%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNLVDGKKIHC---SVLKL 57
+IS +VR G L++A+ FY L G+ PD TFP ++KAC L + K I +V L
Sbjct: 109 IISSFVRNGLLNQAL-AFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
G + + FVA+SL+ Y +G +V KLFD + +D WN M++GY + G +
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF 177
MR++ +S + +T +L VCA I G+ +H +V G++F + N+L++MY+K
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 178 GMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLT 237
G A ++F M D V+WN +I+ Y QS + FF M +G+ PD +T SL
Sbjct: 288 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 238 SIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV 297
V++ + + +H +IMR + D+ + +A++D Y K ++ A +F DV
Sbjct: 348 PSVSKFENLEYCKQIHCYIMRHSISL-DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 298 ISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHA 357
+ + +I+GY NGL +++E+F+ + + +I+PN+ T VSILP + AL+ G ++H
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 358 RVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDK 417
+IK + ++DMY KCGR++ A +F ++ + V WN++I+
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 418 ALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMV 477
A++ FRQM G+ D ++ + L+AC++ S G + H + + + ++
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASDVYSESTLI 584
Query: 478 DLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFE---VDSE 534
D++ + G+L A N + M + S W +++ AC HG ++ + E + +
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 535 NVGYYVLMSNIYANVGKW-EGVDEVRSLARDRGLK-KTPGWSSIEVNNKVDIFYTGNRTH 592
+ + ++S+ +VG EGV RS+ D G++ + ++ + VD+F R
Sbjct: 644 QITFLEIISSC-CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV-----VDLFGRAGRLT 697
Query: 593 PKYEKIYDELRNLTAKMKSLGYVPD 617
YE + KS+ + PD
Sbjct: 698 EAYETV-----------KSMPFPPD 711
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 240/489 (49%), Gaps = 15/489 (3%)
Query: 37 VLKACRN---LVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRD 93
+L+AC N L GK++H ++ D + +L MY G + K+F + +R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 94 SG--SWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLI 151
S WN++IS + ++G +AL +M GVS D T ++ C N +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 152 HLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDP 211
+ G++ N FV+++LI Y ++G + ++FD+++++D V WN ++ Y +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 212 ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNA 271
+ F+ M+ I P+ +T + S+ A +HG ++ G E I N+
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS-IKNS 279
Query: 272 VVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINP 331
++ MY+K G + A +F + D ++WN +I+GY Q+GL E++ F M + + P
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-SGVLP 338
Query: 332 NQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
+ T+ S+LP+ S L +IH ++++ + D+F+ + L+D Y KC + A ++F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 392 YQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVS 451
Q V + A+IS + +G +L FR ++ + P+ IT VS+L +
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 452 EGQRYFH--MMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGAL 508
G R H ++++ F + ++ GC ++D++ + G + +A+ + + R D W ++
Sbjct: 459 LG-RELHGFIIKKGFDNRCNI---GCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSM 513
Query: 509 LGACRIHGN 517
+ C N
Sbjct: 514 ITRCAQSDN 522
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/574 (41%), Positives = 347/574 (60%), Gaps = 3/574 (0%)
Query: 132 VASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMM 191
+ +L AR+ + + GL +H Y+VK GL V+NNLIN Y+K + + R F+
Sbjct: 18 ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77
Query: 192 ERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRS 251
++ +W+SII+ + Q+ P + F M ++PD L S T A L+ C RS
Sbjct: 78 QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 252 VHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNG 311
VH M+ G + DV +G+++VDMYAK G I A +F+ +P ++V++W+ ++ GYAQ G
Sbjct: 138 VHCLSMKTG-YDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 312 LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNCLCFDVFVA 371
EA+ +F+ N + N ++ S++ ++ L G +IH IK+ FV
Sbjct: 197 ENEEALWLFKEALFEN-LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 372 TCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFRQMLDEGVR 431
+ LV +Y KCG + A +F +VP + WNA++ + H K + F++M G++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 432 PDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHN 491
P+ ITF+++L ACSH+GLV EG+ YF M+E I+P KHY +VD+ GRAG L A
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 492 FIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMSNIYANVGK 551
I NMP+ P S+WGALL +C +H N EL A A+D++FE+ + G ++ +SN YA G+
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 552 WEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMKS 611
+E + R L RDRG KK G S +E NKV F G R H K ++IY++L L +M+
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494
Query: 612 LGYVPDKSFVLQDVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNW 671
GY+ D S+VL++V+ DEK + HSERLAIAFG+I+ P PI++ KNLRVCGDCHN
Sbjct: 495 AGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 554
Query: 672 TKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
KF+S T R IIVRD+NRFH F+DG CSC DYW
Sbjct: 555 IKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 37/356 (10%)
Query: 18 FYQFTLTSGLRPDFYTFPPVLKACRNLVD---GKKIHCSVLKLGFEWDVFVAASLLHMYC 74
F + + LRPD + P K+C L G+ +HC +K G++ DVFV +SL+ MY
Sbjct: 103 FLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYA 162
Query: 75 RFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVAS 134
+ G ARK+FD+MP R+ +W+ M+ GY Q G EAL + E E ++++ + +S
Sbjct: 163 KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSS 222
Query: 135 ILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERD 194
++ VCA S + G IH +K + + FV ++L+++Y+K G+ A +VF+++ ++
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN 282
Query: 195 VVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHG 254
+ WN+++ AY Q + F M+ +G++P+ +T +++ LN C H
Sbjct: 283 LGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV------LNACS-----HA 331
Query: 255 FIMRRGWFMEDVIIGN----------AVVDMYAKLGIINSACAVFEGLPVKDVIS-WNTL 303
++ G + D + + ++VDM + G + A V +P+ S W L
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 304 ITG---YAQNGLAS-EAIEVFQMMEECNEINP-NQGTYVSILPAYSHVGALRQGIK 354
+T + LA+ A +VF E+ P + G ++S+ AY+ G K
Sbjct: 392 LTSCTVHKNTELAAFAADKVF-------ELGPVSSGMHISLSNAYAADGRFEDAAK 440
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 195/378 (51%), Gaps = 3/378 (0%)
Query: 42 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 101
R+ + G ++H V+K G VA +L++ Y + L +R+ F+D P + S +W+++I
Sbjct: 29 RSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSII 88
Query: 102 SGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLE 161
S + Q+ +L+ L +M + D + S CA G +H +K G +
Sbjct: 89 SCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD 148
Query: 162 FNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTM 221
++FV ++L++MYAK G + +A ++FD+M +R+VV+W+ ++ Y Q + A F
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 222 QQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI 281
+ + + S+ S+ A R +HG + + F +G+++V +Y+K G+
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 282 INSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILP 341
A VF +PVK++ WN ++ YAQ+ + IE+F+ M + + + PN T++++L
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM-KLSGMKPNFITFLNVLN 326
Query: 342 AYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSV 400
A SH G + +G ++ ++ + LVDM G+ GR+ +A+ + +P +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 401 PWNAIISCHGIHGQGDKA 418
W A+++ +H + A
Sbjct: 387 VWGALLTSCTVHKNTELA 404
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 352/609 (57%), Gaps = 45/609 (7%)
Query: 136 LPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDV 195
L +CAR+ + + +H +IVK G+ ++N L+N+Y K G HAL+VFD+M RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 196 VSWNSIIAAYEQSN-DPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVH- 253
++W S++ A Q+N T F + +G++PD +L A L + R VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 254 GFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLA 313
FI+ + D ++ +++VDMYAK G++NSA AVF+ + VK+ ISW +++GYA++G
Sbjct: 130 HFIVSE--YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 314 SEAIEVFQMM---------------------------------EECNEINPNQGTYVSIL 340
EA+E+F+++ E + ++P SI+
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPL--VLSSIV 245
Query: 341 PAYSHVGALRQGIKIHARVIKNCLCFD--VFVATCLVDMYGKCGRIDDAMSLFYQVPRSS 398
A +++ A G ++H VI L FD VF++ L+DMY KC + A +F ++
Sbjct: 246 GACANLAASIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 399 SVPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 458
V W ++I HGQ +KAL + M+ GV+P+ +TFV L+ ACSH G V +G+ F
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 459 MMQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNM 518
M +++GI+P L+HY C++DL GR+G L A N I MP PD W ALL AC+ G
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 519 ELGAVASDRLF-EVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIE 577
++G +D L ++ Y+L+SNIYA+ W V E R + ++K PG SS+E
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 578 VNNKVDIFYTGNRTHPKYEKIYDELRNLTAKMK-SLGYVPDKSFVLQDVEEDEKEHILTS 636
V + ++FY G +HP E I+ L+ L +M+ GYVPD S++L D++E EKE +L
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 543
Query: 637 HSERLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKD 696
HSER A+A+G++ + P +PI+I KNLRVCGDCH K IS+ITEREIIVRD+ R+HHFK
Sbjct: 544 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 603
Query: 697 GICSCGDYW 705
G CSC D+W
Sbjct: 604 GKCSCNDFW 612
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 226/460 (49%), Gaps = 44/460 (9%)
Query: 42 RNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMI 101
R L K +H ++KLG +A +L+++Y + G A+ A ++FD+MP RD +W +++
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVL 76
Query: 102 SGYCQSGNAVEAL-DILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGL 160
+ Q+ + + L G+ D ++++ CA +I G +H + +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 161 EFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYE-------------- 206
+ V ++L++MYAK G++ A VFD + ++ +SW ++++ Y
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 207 -----------------QSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIV---AQLNDC 246
QS + A FT M++ + D+L + L+SIV A L
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV--DILDPLVLSSIVGACANLAAS 254
Query: 247 RNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTLITG 306
R VHG ++ G F V I NA++DMYAK + +A +F + +DV+SW +LI G
Sbjct: 255 IAGRQVHGLVIALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 307 YAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKN-CLC 365
AQ+G A +A+ ++ M + + PN+ T+V ++ A SHVG + +G ++ + K+ +
Sbjct: 314 MAQHGQAEKALALYDDMVS-HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 366 FDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVP-WNAIISCHGIHGQGDKALNFFRQ 424
+ TCL+D+ G+ G +D+A +L + +P P W A++S G+G +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 425 MLDEGVRPDHITFV---SLLTACSHSGLVSEGQRYFHMMQ 461
++ D T++ ++ + S G VSE +R M+
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 36/329 (10%)
Query: 27 LRPDFYTFPPVLKACRNL--VD-GKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLANVAR 83
LRPD + F ++KAC NL +D G+++HC + + D V +SL+ MY + GL N A+
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 84 KLFDDMPVRDSGSWNAMISGYC-------------------------------QSGNAVE 112
+FD + V+++ SW AM+SGY QSG +E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 113 ALDILDEMRLEGVS-MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLI 171
A + EMR E V +DP+ ++SI+ CA ++G +H ++ G + +F+SN LI
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 172 NMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLL 231
+MYAK + A +F +M RDVVSW S+I Q A + M G++P+ +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 232 TLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEG 291
T V L + + R + + + + ++D+ + G+++ A +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 292 LPV-KDVISWNTLITGYAQNGLASEAIEV 319
+P D +W L++ + G I +
Sbjct: 401 MPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Query: 1 MISVYVRCGRLSEAVDCFYQFTLTSGLRPDFYTFPPVLKACRNL---VDGKKIHCSVLKL 57
+IS +V+ G+ EA F + D ++ AC NL + G+++H V+ L
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 58 GFEWDVFVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDIL 117
GF+ VF++ +L+ MY + A+ +F M RD SW ++I G Q G A +AL +
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 118 DEMRLEGVSMDPITVASILPVCARSDNILSGLLIHLYIVK-HGLEFNLFVSNNLINMYAK 176
D+M GV + +T ++ C+ + G + + K +G+ +L L+++ +
Sbjct: 328 DDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Query: 177 FGMMRHALRVFDQM-MERDVVSWNSIIAA 204
G++ A + M D +W ++++A
Sbjct: 388 SGLLDEAENLIHTMPFPPDEPTWAALLSA 416
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 354/606 (58%), Gaps = 52/606 (8%)
Query: 151 IHLYIVKHGLEFNLFVSNNLINMYAKFGM----MRHALRVFDQMMERDVVSWNSIIAAYE 206
IH +K G + + ++ A + + +A ++F+QM +R+ SWN+II +
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 207 QSNDP---ITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGW-- 261
+S++ I F+ M ++P+ T S+ A+ + + +HG ++ G+
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 262 ----------------FMED--------------------------VIIGNAVVDMYAKL 279
FM+D +++ N ++D Y +L
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 280 GIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSI 339
G +A +F+ + + V+SWNT+I+GY+ NG +A+EVF+ M++ +I PN T VS+
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK-GDIRPNYVTLVSV 280
Query: 340 LPAYSHVGALRQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSS 399
LPA S +G+L G +H + + D + + L+DMY KCG I+ A+ +F ++PR +
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 400 VPWNAIISCHGIHGQGDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHM 459
+ W+A+I+ IHGQ A++ F +M GVRP + +++LLTACSH GLV EG+RYF
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 460 MQEEFGIKPHLKHYGCMVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNME 519
M G++P ++HYGCMVDL GR+G L A FI NMP++PD IW ALLGACR+ GN+E
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 520 LGAVASDRLFEVDSENVGYYVLMSNIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVN 579
+G ++ L ++ + G YV +SN+YA+ G W V E+R +++ ++K PG S I+++
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Query: 580 NKVDIFYTGNRTHPKYEKIYDELRNLTAKMKSLGYVPDKSFVLQDVEEDEKEHILTSHSE 639
+ F + +HPK ++I L ++ K++ GY P + VL ++EE++KE++L HSE
Sbjct: 521 GVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSE 580
Query: 640 RLAIAFGIISSPPKSPIQIFKNLRVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGIC 699
++A AFG+IS+ P PI+I KNLR+C DCH+ K IS++ +R+I VRD RFHHF+DG C
Sbjct: 581 KIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSC 640
Query: 700 SCGDYW 705
SC DYW
Sbjct: 641 SCMDYW 646
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 157/566 (27%), Positives = 257/566 (45%), Gaps = 78/566 (13%)
Query: 36 PVLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGL----ANVARKLFDDMPV 91
P + CR + D +IH +K G D AA +L L + A K+F+ MP
Sbjct: 28 PQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 92 RDSGSWNAMISGYCQSG--NAVEALDILDEMRL-EGVSMDPITVASILPVCARSDNILSG 148
R+ SWN +I G+ +S A+ A+ + EM E V + T S+L CA++ I G
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 149 LLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA------------------------- 183
IH +K+G + FV +NL+ MY G M+ A
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 184 -----------LR---------VFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQ 223
+R +FD+M +R VVSWN++I+ Y + A F M++
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 224 AGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIIN 283
I+P+ +TLVS+ +++L +H + G ++DV +G+A++DMY+K GII
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIE 326
Query: 284 SACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAY 343
A VFE LP ++VI+W+ +I G+A +G A +AI+ F M + + P+ Y+++L A
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTAC 385
Query: 344 SHVGALRQGIKIHARVIK-NCLCFDVFVATCLVDMYGKCGRIDDAMSLFYQVP-RSSSVP 401
SH G + +G + ++++ + L + C+VD+ G+ G +D+A +P + V
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI 445
Query: 402 WNAIISCHGIHGQ---GDKALNFFRQMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFH 458
W A++ + G G + N M V D +V+L + G SE
Sbjct: 446 WKALLGACRMQGNVEMGKRVANILMDM----VPHDSGAYVALSNMYASQGNWSEVSEMRL 501
Query: 459 MMQEEFGIKPHLKHYGC-MVDLFGRAGHLGMAHNFIQNMPVRPDASIWGALL----GACR 513
M+E K K GC ++D+ G+ H F+ P A ++L R
Sbjct: 502 RMKE----KDIRKDPGCSLIDID------GVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Query: 514 IHGNMELGAVASDRLFEVDSENVGYY 539
+ G + L E D ENV +Y
Sbjct: 552 LAGYRPITTQVLLNLEEEDKENVLHY 577
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 172/386 (44%), Gaps = 57/386 (14%)
Query: 14 AVDCFYQFTLTSGLRPDFYTFPPVLKACR---NLVDGKKIHCSVLKLGFEWDVFVAASLL 70
A+ FY+ + P+ +TFP VLKAC + +GK+IH LK GF D FV ++L+
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 71 HMYC---------------------------------------------RFGLANVARKL 85
MY R G AR L
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 86 FDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNI 145
FD M R SWN MISGY +G +A+++ EM+ + + +T+ S+LP +R ++
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 146 LSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSII--- 202
G +HLY G+ + + + LI+MY+K G++ A+ VF+++ +V++W+++I
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGF 350
Query: 203 AAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWF 262
A + Q+ D I F M+QAG++P + ++L + + R ++
Sbjct: 351 AIHGQAGDAIDC---FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 263 MEDVIIGNAVVDMYAKLGIINSACAVFEGLPVK-DVISWNTLITGYAQNGLASEAIEVFQ 321
+ +VD+ + G+++ A +P+K D + W L+ G V
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 322 MMEECNEINPNQGTYVSILPAYSHVG 347
++ + + + G YV++ Y+ G
Sbjct: 468 IL--MDMVPHDSGAYVALSNMYASQG 491
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 57/333 (17%)
Query: 239 IVAQLNDCRNSR---SVHGFIMRRGWFMEDVIIGNAVVDMYAKLGI----INSACAVFEG 291
+ Q+N+CR R +H ++ G M D + ++ A + ++ A +F
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQ-MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQ 84
Query: 292 LPVKDVISWNTLITGYAQNG--LASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGAL 349
+P ++ SWNT+I G++++ A AI +F M + PN+ T+ S+L A + G +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 350 RQGIKIHARVIKNCLCFDVFVATCLVDMYGKCGRIDDAMSLFY----------------- 392
++G +IH +K D FV + LV MY CG + DA LFY
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKR 204
Query: 393 ----------------------------QVPRSSSVPWNAIISCHGIHGQGDKALNFFRQ 424
++ + S V WN +IS + ++G A+ FR+
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 425 MLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRAG 484
M +RP+++T VS+L A S G + G+ + H+ E+ GI+ ++D++ + G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGE-WLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 485 HLGMAHNFIQNMPVRPDASIWGALLGACRIHGN 517
+ A + + +P R + W A++ IHG
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIHGQ 355
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/583 (38%), Positives = 346/583 (59%), Gaps = 7/583 (1%)
Query: 127 MDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKF---GMMRHA 183
+D + + + + ++ +++ + I Y +K +E FV+ LIN + M +A
Sbjct: 24 IDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYA 82
Query: 184 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 243
+F+ M E D+V +NS+ Y + +P+ F + + GI PD T SL A
Sbjct: 83 RHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVA 142
Query: 244 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDVISWNTL 303
R +H M+ G ++V + +++MY + ++SA VF+ + V+ +N +
Sbjct: 143 KALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 304 ITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYSHVGALRQGIKIHARVIKNC 363
ITGYA+ +EA+ +F+ M+ + PN+ T +S+L + + +G+L G IH K+
Sbjct: 202 ITGYARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 364 LCFDVFVATCLVDMYGKCGRIDDAMSLFYQVPRSSSVPWNAIISCHGIHGQGDKALNFFR 423
C V V T L+DM+ KCG +DDA+S+F ++ + W+A+I + HG+ +K++ F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 424 QMLDEGVRPDHITFVSLLTACSHSGLVSEGQRYFHMMQEEFGIKPHLKHYGCMVDLFGRA 483
+M E V+PD ITF+ LL ACSH+G V EG++YF M +FGI P +KHYG MVDL RA
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 484 GHLGMAHNFIQNMPVRPDASIWGALLGACRIHGNMELGAVASDRLFEVDSENVGYYVLMS 543
G+L A+ FI +P+ P +W LL AC H N++L S+R+FE+D + G YV++S
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 544 NIYANVGKWEGVDEVRSLARDRGLKKTPGWSSIEVNNKVDIFYTGNRTHPKYEKIYDELR 603
N+YA KWE VD +R + +DR K PG SSIEVNN V F++G+ K++ L
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500
Query: 604 NLTAKMKSLGYVPDKSFVLQ-DVEEDEKEHILTSHSERLAIAFGIISSPPKSPIQIFKNL 662
+ ++K GYVPD S V+ ++ + EKE L HSE+LAI FG++++PP + I++ KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560
Query: 663 RVCGDCHNWTKFISQITEREIIVRDSNRFHHFKDGICSCGDYW 705
RVC DCHN K IS I R++++RD RFHHF+DG CSCGD+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 201/388 (51%), Gaps = 10/388 (2%)
Query: 37 VLKACRNLVDGKKIHCSVLKLGFEWDVFVAASLLHMYCRFGLA----NVARKLFDDMPVR 92
++ C +L + +I +K E DV A L++ +C + AR LF+ M
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLIN-FCTESPTESSMSYARHLFEAMSEP 92
Query: 93 DSGSWNAMISGYCQSGNAVEALDILDEMRLEGVSMDPITVASILPVCARSDNILSGLLIH 152
D +N+M GY + N +E + E+ +G+ D T S+L CA + + G +H
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 153 LYIVKHGLEFNLFVSNNLINMYAKFGMMRHALRVFDQMMERDVVSWNSIIAAYEQSNDPI 212
+K GL+ N++V LINMY + + A VFD+++E VV +N++I Y + N P
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 213 TAHGFFTTMQQAGIQPDLLTLVSLTSIVAQLNDCRNSRSVHGFIMRRGWFMEDVIIGNAV 272
A F MQ ++P+ +TL+S+ S A L + +H + ++ F + V + A+
Sbjct: 213 EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY-AKKHSFCKYVKVNTAL 271
Query: 273 VDMYAKLGIINSACAVFEGLPVKDVISWNTLITGYAQNGLASEAIEVFQMMEECNEINPN 332
+DM+AK G ++ A ++FE + KD +W+ +I YA +G A +++ +F+ M N + P+
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-VQPD 330
Query: 333 QGTYVSILPAYSHVGALRQGIKIHARVI-KNCLCFDVFVATCLVDMYGKCGRIDDAMSLF 391
+ T++ +L A SH G + +G K ++++ K + + +VD+ + G ++DA
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 392 YQVPRS-SSVPWNAIISCHGIHGQGDKA 418
++P S + + W +++ H D A
Sbjct: 391 DKLPISPTPMLWRILLAACSSHNNLDLA 418
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 178/358 (49%), Gaps = 14/358 (3%)
Query: 9 GRLSEAVDCFYQFT--LTSGLRPDFYTFPPVLKAC---RNLVDGKKIHCSVLKLGFEWDV 63
R + ++ F F L G+ PD YTFP +LKAC + L +G+++HC +KLG + +V
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 64 FVAASLLHMYCRFGLANVARKLFDDMPVRDSGSWNAMISGYCQSGNAVEALDILDEMRLE 123
+V +L++MY + AR +FD + +NAMI+GY + EAL + EM+ +
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 124 GVSMDPITVASILPVCARSDNILSGLLIHLYIVKHGLEFNLFVSNNLINMYAKFGMMRHA 183
+ + IT+ S+L CA ++ G IH Y KH + V+ LI+M+AK G + A
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 184 LRVFDQMMERDVVSWNSIIAAYEQSNDPITAHGFFTTMQQAGIQPDLLTLVSLTSIVAQL 243
+ +F++M +D +W+++I AY + F M+ +QPD +T + L + +
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 244 NDCRNSRSVHGFIMRRGWFMEDVIIGNAVVDMYAKLGIINSACAVFEGLPVKDV-ISWNT 302
R ++ + + + ++VD+ ++ G + A + LP+ + W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 303 LITGYAQNGLASEAIEVFQMMEECNEINPNQGTYVSILPAYS------HVGALRQGIK 354
L+ + + A +V + + E ++ + G YV + Y+ +V +LR+ +K
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDD--SHGGDYVILSNLYARNKKWEYVDSLRKVMK 460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,667,560
Number of Sequences: 539616
Number of extensions: 11175126
Number of successful extensions: 41430
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 31573
Number of HSP's gapped (non-prelim): 2348
length of query: 705
length of database: 191,569,459
effective HSP length: 125
effective length of query: 580
effective length of database: 124,117,459
effective search space: 71988126220
effective search space used: 71988126220
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)