Query 005270
Match_columns 705
No_of_seqs 505 out of 2622
Neff 6.3
Searched_HMMs 46136
Date Thu Mar 28 20:47:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005270.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005270hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1595 CCCH-type Zn-finger pr 100.0 1.4E-80 3.1E-85 674.9 18.3 498 28-665 10-524 (528)
2 KOG4412 26S proteasome regulat 99.8 9.3E-21 2E-25 182.7 8.8 147 28-199 37-183 (226)
3 KOG4412 26S proteasome regulat 99.8 5E-20 1.1E-24 177.7 11.6 137 26-186 69-205 (226)
4 KOG0509 Ankyrin repeat and DHH 99.8 2E-19 4.3E-24 200.8 12.9 175 29-229 44-225 (600)
5 KOG0509 Ankyrin repeat and DHH 99.8 2.3E-19 5E-24 200.2 12.4 173 28-226 77-255 (600)
6 PHA02743 Viral ankyrin protein 99.8 4.1E-18 8.9E-23 166.7 14.0 132 28-183 19-158 (166)
7 PHA02859 ankyrin repeat protei 99.8 5E-18 1.1E-22 172.2 15.0 134 29-184 21-156 (209)
8 PHA02878 ankyrin repeat protei 99.7 1.2E-17 2.6E-22 188.9 15.3 132 27-183 35-231 (477)
9 PHA02859 ankyrin repeat protei 99.7 4.6E-17 9.9E-22 165.2 16.2 130 28-180 50-186 (209)
10 PHA02791 ankyrin-like protein; 99.7 4.4E-17 9.6E-22 172.8 15.7 131 29-184 61-225 (284)
11 PHA02791 ankyrin-like protein; 99.7 4.9E-17 1.1E-21 172.5 15.9 126 27-179 28-154 (284)
12 PHA02875 ankyrin repeat protei 99.7 5.6E-17 1.2E-21 179.7 16.6 144 28-183 34-198 (413)
13 PHA02741 hypothetical protein; 99.7 5.5E-17 1.2E-21 159.0 13.5 129 27-179 19-158 (169)
14 PHA02736 Viral ankyrin protein 99.7 2.6E-17 5.6E-22 158.3 11.0 139 16-179 4-152 (154)
15 PHA02875 ankyrin repeat protei 99.7 1.4E-16 3.1E-21 176.5 16.8 130 28-182 101-231 (413)
16 PLN03192 Voltage-dependent pot 99.7 2.3E-16 5E-21 189.8 17.6 134 29-184 525-686 (823)
17 PHA02946 ankyin-like protein; 99.7 2E-16 4.3E-21 178.0 15.4 194 30-248 38-247 (446)
18 PHA02874 ankyrin repeat protei 99.7 2.2E-16 4.9E-21 176.5 15.5 130 28-181 34-185 (434)
19 PHA02874 ankyrin repeat protei 99.7 2.4E-16 5.2E-21 176.2 15.5 144 28-183 67-220 (434)
20 KOG0508 Ankyrin repeat protein 99.7 4.6E-17 1E-21 175.6 9.1 125 31-179 85-209 (615)
21 PHA03100 ankyrin repeat protei 99.7 1.8E-16 3.9E-21 178.6 14.3 98 74-182 104-205 (480)
22 PHA03095 ankyrin-like protein; 99.7 3.9E-16 8.4E-21 175.3 16.3 130 29-180 47-181 (471)
23 PHA02884 ankyrin repeat protei 99.7 3.2E-16 7E-21 167.0 14.7 130 26-174 29-158 (300)
24 PHA02878 ankyrin repeat protei 99.7 3.7E-16 8.1E-21 176.8 16.1 124 29-179 168-293 (477)
25 PHA02946 ankyin-like protein; 99.7 2.8E-16 6.1E-21 176.8 14.9 170 31-226 74-252 (446)
26 KOG0512 Fetal globin-inducing 99.7 2.9E-16 6.3E-21 150.8 11.0 124 28-174 62-185 (228)
27 PHA02876 ankyrin repeat protei 99.7 4.7E-16 1E-20 183.5 14.8 131 28-181 272-403 (682)
28 KOG0510 Ankyrin repeat protein 99.7 2.6E-16 5.7E-21 178.9 10.8 134 24-181 268-405 (929)
29 PHA02716 CPXV016; CPX019; EVM0 99.7 7.3E-16 1.6E-20 181.0 14.4 133 28-183 176-349 (764)
30 PHA03100 ankyrin repeat protei 99.7 6E-16 1.3E-20 174.4 13.3 170 29-226 106-293 (480)
31 PHA03095 ankyrin-like protein; 99.7 6.9E-16 1.5E-20 173.3 13.6 127 34-183 19-149 (471)
32 PHA02798 ankyrin-like protein; 99.6 8.7E-16 1.9E-20 174.5 14.2 136 26-182 33-177 (489)
33 PHA02876 ankyrin repeat protei 99.6 1.5E-15 3.3E-20 179.2 16.4 101 73-183 372-473 (682)
34 PHA02989 ankyrin repeat protei 99.6 1.3E-15 2.9E-20 173.2 14.5 170 73-251 105-297 (494)
35 PHA02716 CPXV016; CPX019; EVM0 99.6 1.8E-15 3.9E-20 177.7 15.1 139 27-183 210-396 (764)
36 PHA02989 ankyrin repeat protei 99.6 2E-15 4.4E-20 171.7 14.6 136 26-181 32-175 (494)
37 PF12796 Ank_2: Ankyrin repeat 99.6 4E-15 8.7E-20 129.5 11.8 87 80-181 1-87 (89)
38 KOG0502 Integral membrane anky 99.6 1.1E-15 2.5E-20 151.5 8.9 113 73-198 157-269 (296)
39 KOG0508 Ankyrin repeat protein 99.6 8.9E-16 1.9E-20 165.8 8.6 122 27-174 115-236 (615)
40 PHA02798 ankyrin-like protein; 99.6 8.3E-15 1.8E-19 166.5 16.2 103 74-183 143-288 (489)
41 PHA02795 ankyrin-like protein; 99.6 8.2E-15 1.8E-19 162.4 14.8 146 29-179 116-288 (437)
42 KOG0195 Integrin-linked kinase 99.6 1.1E-15 2.4E-20 156.4 4.8 123 33-179 4-126 (448)
43 KOG0510 Ankyrin repeat protein 99.6 8.3E-15 1.8E-19 166.9 11.2 139 29-179 225-367 (929)
44 PHA02795 ankyrin-like protein; 99.6 4.1E-14 8.8E-19 157.0 14.9 99 75-183 148-251 (437)
45 KOG0502 Integral membrane anky 99.5 9.2E-15 2E-19 145.1 8.4 125 28-178 159-283 (296)
46 KOG0514 Ankyrin repeat protein 99.5 9.5E-15 2.1E-19 153.9 8.7 135 28-186 267-407 (452)
47 KOG4177 Ankyrin [Cell wall/mem 99.5 1.3E-14 2.8E-19 173.9 10.9 126 29-179 507-632 (1143)
48 PHA02741 hypothetical protein; 99.5 3.4E-14 7.4E-19 139.2 11.8 100 74-181 19-127 (169)
49 PHA02917 ankyrin-like protein; 99.5 4.3E-14 9.3E-19 165.9 13.5 123 32-179 105-256 (661)
50 KOG0195 Integrin-linked kinase 99.5 2.6E-14 5.6E-19 146.5 10.0 134 21-179 26-159 (448)
51 KOG0505 Myosin phosphatase, re 99.5 2.8E-14 6E-19 157.0 9.6 128 28-179 72-257 (527)
52 PHA02917 ankyrin-like protein; 99.5 8.9E-14 1.9E-18 163.2 14.5 131 28-183 31-168 (661)
53 KOG0514 Ankyrin repeat protein 99.5 6.3E-14 1.4E-18 147.8 10.5 123 28-175 301-429 (452)
54 PHA02743 Viral ankyrin protein 99.5 1.2E-13 2.5E-18 135.3 11.0 102 73-182 17-124 (166)
55 PF12796 Ank_2: Ankyrin repeat 99.5 2.1E-13 4.5E-18 118.7 11.1 89 33-144 1-89 (89)
56 KOG4214 Myotrophin and similar 99.5 1E-13 2.2E-18 121.0 9.0 102 33-154 6-107 (117)
57 PHA02730 ankyrin-like protein; 99.5 2.2E-13 4.8E-18 157.7 14.4 131 32-184 346-493 (672)
58 PHA02730 ankyrin-like protein; 99.5 3.1E-13 6.7E-18 156.5 13.9 131 27-179 376-524 (672)
59 KOG4177 Ankyrin [Cell wall/mem 99.5 1.9E-13 4E-18 164.1 12.1 137 28-187 439-607 (1143)
60 PHA02884 ankyrin repeat protei 99.4 7.7E-13 1.7E-17 141.2 13.1 105 70-184 26-135 (300)
61 TIGR00870 trp transient-recept 99.4 1.4E-12 3E-17 155.7 15.9 132 28-181 16-203 (743)
62 cd00204 ANK ankyrin repeats; 99.4 3.4E-12 7.5E-17 114.5 14.4 122 27-173 5-126 (126)
63 TIGR00870 trp transient-recept 99.4 8.9E-13 1.9E-17 157.3 11.0 142 28-179 51-243 (743)
64 PHA02792 ankyrin-like protein; 99.4 1.3E-12 2.9E-17 150.0 11.1 126 26-175 68-239 (631)
65 COG0666 Arp FOG: Ankyrin repea 99.4 4.5E-12 9.7E-17 124.9 13.4 123 29-176 73-203 (235)
66 KOG0512 Fetal globin-inducing 99.4 9.1E-13 2E-17 127.0 7.9 98 76-183 63-160 (228)
67 PHA02792 ankyrin-like protein; 99.4 5.7E-12 1.2E-16 144.8 14.2 132 29-179 339-479 (631)
68 PLN03192 Voltage-dependent pot 99.3 4.5E-12 9.8E-17 152.9 13.5 95 74-179 523-617 (823)
69 KOG3676 Ca2+-permeable cation 99.3 3.9E-12 8.4E-17 146.1 11.5 138 25-176 180-331 (782)
70 KOG0515 p53-interacting protei 99.3 4.8E-12 1E-16 138.3 10.5 123 29-174 550-673 (752)
71 PHA02736 Viral ankyrin protein 99.3 5.3E-12 1.2E-16 121.4 8.4 97 28-141 54-153 (154)
72 KOG4214 Myotrophin and similar 99.3 7.1E-12 1.5E-16 109.6 7.9 96 79-186 5-100 (117)
73 KOG0507 CASK-interacting adapt 99.3 5.3E-12 1.1E-16 143.4 7.5 141 31-183 5-145 (854)
74 KOG1710 MYND Zn-finger and ank 99.3 2.4E-11 5.3E-16 125.0 11.5 125 26-174 9-133 (396)
75 KOG0507 CASK-interacting adapt 99.3 9.1E-12 2E-16 141.5 9.2 124 27-175 47-170 (854)
76 cd00204 ANK ankyrin repeats; 99.3 5.5E-11 1.2E-15 106.6 12.6 96 73-179 4-99 (126)
77 KOG0505 Myosin phosphatase, re 99.2 2.2E-11 4.8E-16 134.4 10.2 171 30-228 41-276 (527)
78 PTZ00322 6-phosphofructo-2-kin 99.2 1.4E-10 3.1E-15 136.8 15.9 95 78-183 84-185 (664)
79 PTZ00322 6-phosphofructo-2-kin 99.2 6.6E-11 1.4E-15 139.6 12.3 106 31-155 84-196 (664)
80 PF13857 Ank_5: Ankyrin repeat 99.2 1.9E-11 4.2E-16 98.3 4.4 56 95-154 1-56 (56)
81 PF13637 Ank_4: Ankyrin repeat 99.2 7.7E-11 1.7E-15 93.8 6.7 54 76-134 1-54 (54)
82 KOG0515 p53-interacting protei 99.1 1E-10 2.2E-15 128.2 7.7 118 79-208 553-670 (752)
83 KOG3676 Ca2+-permeable cation 99.1 3.2E-10 7E-15 130.5 12.0 131 29-178 143-298 (782)
84 PF13637 Ank_4: Ankyrin repeat 99.1 1.8E-10 3.8E-15 91.7 6.7 54 111-173 1-54 (54)
85 PF13857 Ank_5: Ankyrin repeat 99.1 1.5E-10 3.3E-15 93.1 4.7 53 51-118 3-56 (56)
86 KOG4369 RTK signaling protein 99.0 1.4E-10 3E-15 135.0 5.2 129 31-182 758-886 (2131)
87 COG0666 Arp FOG: Ankyrin repea 99.0 6.2E-09 1.3E-13 102.5 14.1 101 73-181 70-175 (235)
88 KOG4369 RTK signaling protein 99.0 2E-10 4.3E-15 133.7 3.4 178 28-229 856-1040(2131)
89 KOG1677 CCCH-type Zn-finger pr 98.6 2.5E-08 5.5E-13 108.2 4.1 67 276-342 129-209 (332)
90 KOG1595 CCCH-type Zn-finger pr 98.6 2.1E-08 4.5E-13 111.5 3.2 196 109-336 56-261 (528)
91 KOG1710 MYND Zn-finger and ank 98.6 2E-07 4.4E-12 96.5 10.0 94 75-179 11-105 (396)
92 KOG0506 Glutaminase (contains 98.6 5.8E-08 1.3E-12 105.9 5.3 93 28-138 505-597 (622)
93 KOG0782 Predicted diacylglycer 98.6 1.9E-07 4.1E-12 103.3 9.2 122 31-175 868-989 (1004)
94 KOG0783 Uncharacterized conser 98.5 4.8E-08 1E-12 112.0 4.5 96 44-156 32-128 (1267)
95 KOG0506 Glutaminase (contains 98.5 7.9E-08 1.7E-12 104.9 5.4 94 73-177 503-597 (622)
96 KOG0818 GTPase-activating prot 98.5 4.9E-07 1.1E-11 99.2 9.2 97 73-179 124-226 (669)
97 KOG0818 GTPase-activating prot 98.3 2.6E-06 5.7E-11 93.6 9.2 87 32-136 136-222 (669)
98 PF13606 Ank_3: Ankyrin repeat 98.2 1.1E-06 2.5E-11 61.8 3.9 28 76-104 2-29 (30)
99 PF00023 Ank: Ankyrin repeat H 98.2 1.5E-06 3.3E-11 62.1 4.3 32 110-144 1-32 (33)
100 KOG0705 GTPase-activating prot 98.2 3.6E-06 7.9E-11 94.0 9.0 94 31-141 626-721 (749)
101 PF13606 Ank_3: Ankyrin repeat 98.2 1.5E-06 3.2E-11 61.2 3.8 30 110-142 1-30 (30)
102 KOG0705 GTPase-activating prot 98.2 3E-06 6.6E-11 94.6 8.1 91 80-179 628-720 (749)
103 KOG0522 Ankyrin repeat protein 98.1 5.3E-06 1.2E-10 92.4 7.4 88 78-175 22-110 (560)
104 COG5063 CTH1 CCCH-type Zn-fing 98.1 2.3E-06 5E-11 89.1 3.2 68 276-343 225-307 (351)
105 PF00023 Ank: Ankyrin repeat H 98.1 5.3E-06 1.1E-10 59.3 4.1 31 75-106 1-31 (33)
106 KOG3609 Receptor-activated Ca2 98.0 2E-05 4.4E-10 92.1 10.3 125 26-181 22-159 (822)
107 KOG0783 Uncharacterized conser 97.9 6.1E-06 1.3E-10 95.3 3.0 77 103-189 45-122 (1267)
108 KOG0522 Ankyrin repeat protein 97.8 3.9E-05 8.4E-10 85.7 7.8 87 32-136 23-110 (560)
109 KOG0521 Putative GTPase activa 97.8 1.8E-05 3.9E-10 94.5 5.1 78 74-156 654-731 (785)
110 KOG0511 Ankyrin repeat protein 97.7 0.00014 3E-09 78.3 8.6 85 77-175 37-121 (516)
111 KOG2384 Major histocompatibili 97.5 0.00016 3.4E-09 71.6 6.1 65 101-175 3-68 (223)
112 KOG2384 Major histocompatibili 97.4 0.0003 6.4E-09 69.8 6.6 68 74-145 10-77 (223)
113 KOG0520 Uncharacterized conser 97.3 0.00028 6E-09 84.5 5.2 121 31-175 575-702 (975)
114 KOG0511 Ankyrin repeat protein 97.2 0.0015 3.3E-08 70.5 9.8 85 30-136 37-121 (516)
115 KOG2494 C3H1-type Zn-finger pr 97.1 0.00014 2.9E-09 77.3 0.1 64 280-345 38-104 (331)
116 KOG0520 Uncharacterized conser 97.0 0.00037 8.1E-09 83.4 3.4 96 72-179 570-667 (975)
117 KOG0782 Predicted diacylglycer 97.0 0.0011 2.3E-08 74.5 6.4 89 80-179 870-960 (1004)
118 PF00642 zf-CCCH: Zinc finger 96.6 0.00042 9.1E-09 47.6 -0.5 25 277-301 1-26 (27)
119 PF00642 zf-CCCH: Zinc finger 96.2 0.0011 2.4E-08 45.5 -0.3 23 312-334 1-27 (27)
120 COG5063 CTH1 CCCH-type Zn-fing 96.1 0.0045 9.7E-08 65.2 3.5 65 274-338 269-342 (351)
121 KOG0521 Putative GTPase activa 96.1 0.0049 1.1E-07 74.1 4.2 81 27-123 654-734 (785)
122 smart00356 ZnF_C3H1 zinc finge 95.9 0.0058 1.3E-07 41.3 2.3 25 277-301 2-26 (27)
123 KOG1677 CCCH-type Zn-finger pr 95.7 0.0076 1.6E-07 65.6 3.3 61 280-340 87-163 (332)
124 KOG2505 Ankyrin repeat protein 95.6 0.018 3.9E-07 64.5 5.9 63 89-155 404-471 (591)
125 smart00248 ANK ankyrin repeats 95.5 0.023 5E-07 36.5 4.0 24 76-99 2-25 (30)
126 smart00248 ANK ankyrin repeats 95.4 0.025 5.4E-07 36.4 3.8 29 110-141 1-29 (30)
127 KOG2505 Ankyrin repeat protein 94.9 0.048 1E-06 61.2 6.3 76 35-119 396-471 (591)
128 KOG3609 Receptor-activated Ca2 94.9 0.024 5.2E-07 67.2 4.1 88 75-179 24-114 (822)
129 smart00356 ZnF_C3H1 zinc finge 93.9 0.042 9E-07 37.1 2.0 23 312-334 2-27 (27)
130 PF06128 Shigella_OspC: Shigel 93.2 0.51 1.1E-05 48.6 9.1 117 33-179 157-280 (284)
131 KOG1040 Polyadenylation factor 92.3 0.072 1.6E-06 57.9 2.0 52 276-334 74-129 (325)
132 KOG1492 C3H1-type Zn-finger pr 91.3 0.13 2.8E-06 52.2 2.4 63 251-332 217-281 (377)
133 PF14608 zf-CCCH_2: Zinc finge 90.7 0.17 3.7E-06 31.9 1.7 17 316-332 1-18 (19)
134 KOG2333 Uncharacterized conser 89.6 0.15 3.3E-06 57.3 1.3 60 278-339 75-145 (614)
135 KOG3702 Nuclear polyadenylated 88.5 0.6 1.3E-05 54.4 5.0 91 242-335 542-646 (681)
136 PF14608 zf-CCCH_2: Zinc finge 82.2 1 2.2E-05 28.4 1.8 19 281-301 1-19 (19)
137 COG5084 YTH1 Cleavage and poly 81.6 1.3 2.9E-05 47.3 3.5 52 276-334 101-158 (285)
138 KOG1763 Uncharacterized conser 79.3 0.27 5.9E-06 51.9 -2.5 27 277-303 90-116 (343)
139 COG5252 Uncharacterized conser 78.2 0.32 7E-06 49.9 -2.3 60 277-336 83-177 (299)
140 KOG2494 C3H1-type Zn-finger pr 77.8 1.5 3.3E-05 47.2 2.5 54 242-305 43-96 (331)
141 KOG1492 C3H1-type Zn-finger pr 73.8 1.9 4.1E-05 43.9 1.8 53 279-340 206-262 (377)
142 KOG1040 Polyadenylation factor 72.1 2.9 6.2E-05 45.7 2.8 77 247-341 83-164 (325)
143 PF06128 Shigella_OspC: Shigel 70.8 7 0.00015 40.5 5.0 93 34-139 183-279 (284)
144 KOG2185 Predicted RNA-processi 66.0 2.9 6.2E-05 46.3 1.2 31 305-335 131-164 (486)
145 COG5152 Uncharacterized conser 65.2 2.8 6E-05 42.2 0.9 33 271-303 133-166 (259)
146 KOG4791 Uncharacterized conser 62.0 6.5 0.00014 44.4 3.0 72 254-341 16-91 (667)
147 KOG2185 Predicted RNA-processi 61.2 5 0.00011 44.5 2.0 21 281-301 142-162 (486)
148 KOG1813 Predicted E3 ubiquitin 57.9 4.5 9.8E-05 43.2 1.0 34 272-305 179-213 (313)
149 PF03158 DUF249: Multigene fam 55.2 59 0.0013 32.9 8.1 45 115-174 147-191 (192)
150 PF11929 DUF3447: Domain of un 55.1 21 0.00046 30.3 4.5 48 77-136 7-54 (76)
151 PF11929 DUF3447: Domain of un 54.8 18 0.00038 30.8 3.9 47 113-175 8-54 (76)
152 COG5084 YTH1 Cleavage and poly 39.6 2.4E+02 0.0052 30.5 10.3 52 279-337 134-192 (285)
153 KOG3702 Nuclear polyadenylated 37.5 40 0.00087 39.9 4.5 47 290-337 553-608 (681)
154 KOG4791 Uncharacterized conser 32.4 12 0.00026 42.4 -0.8 51 281-337 5-57 (667)
155 KOG0193 Serine/threonine prote 29.5 1.1E+02 0.0024 36.3 6.3 16 312-327 204-221 (678)
156 PF10650 zf-C3H1: Putative zin 28.2 33 0.00071 23.0 1.1 17 316-332 2-21 (23)
157 KOG1039 Predicted E3 ubiquitin 27.0 25 0.00055 38.8 0.6 24 280-303 9-32 (344)
158 PF03158 DUF249: Multigene fam 26.3 1.1E+02 0.0024 31.1 4.8 45 80-135 147-191 (192)
159 COG5152 Uncharacterized conser 24.7 32 0.00068 34.9 0.7 23 316-338 143-169 (259)
160 KOG4786 Ubinuclein, nuclear pr 24.2 6.3E+02 0.014 30.8 10.9 31 381-411 968-1001(1136)
161 COG5252 Uncharacterized conser 22.9 17 0.00036 37.8 -1.6 29 312-340 83-114 (299)
162 KOG0153 Predicted RNA-binding 21.8 53 0.0012 36.1 1.8 26 278-303 160-185 (377)
163 KOG3777 Uncharacterized conser 20.7 2.5E+02 0.0053 32.3 6.8 32 269-302 161-192 (443)
No 1
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=1.4e-80 Score=674.94 Aligned_cols=498 Identities=41% Similarity=0.654 Sum_probs=390.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
...+.+.+.++.+++..|++++++....++...+||+++.+.+.|..+.+|+|++|+.+|.++++.+|+..+..++|..|
T Consensus 10 ~~ls~~~e~~~~~~~~~~k~~~~e~~~~~~~~~~~~r~~~~~k~~~~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C 89 (528)
T KOG1595|consen 10 RALSCLSEFEAPNDYAYLKEFRVEQPLFLQHKCLQHRPFVCFKWHFLNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGIC 89 (528)
T ss_pred hhhhcchhhccccHHHHHHHHHHhchhhhhhhhcccccchhhhhhhhccccccchhhhcCccccccceeecchhhccccC
Confidence 34466668999999999999999899999999999999999999999999999999999999999999988878999997
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
..++. ||++.+...+.++.+..|+.+++..+++|..|+.+...+.........+...+++.|++.+. . ..+
T Consensus 90 ~~~~~---~C~~~g~s~~~~e~~~hL~~~k~~~~~tda~g~~~~~v~~~~~~~~~~~~r~~~~~l~e~~~-~--~~~--- 160 (528)
T KOG1595|consen 90 PDGDE---HCAVLGRSVGDTERTYHLRYYKTLPCVTDARGNCVKNVLHCAFAHGPNDLRPPVEDLLELQG-G--SGL--- 160 (528)
T ss_pred CCCcc---cchhcccccCCcceeEeccccccccCccccCCCcccCcccccccCCccccccHHHHHHhccc-c--cCc---
Confidence 65555 99999888788999999999999999999999877554431112344666788888888762 1 000
Q ss_pred hhhHHHHHHhhcCCCCccchhccccccccCCCcccccCCCcCCccccccccccccccccCccccCCCCcccccccCCCCc
Q 005270 188 CDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENA 267 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~~~ll~~~~~kke~Pldlalpd~~~~~y~sdefrm~sfKv~PCsra~shD~teCp~~hp~E~~ 267 (705)
...+...... ....+|++|...|||+ ++|++|+|+|+.||+++|.+.++|||++|||+|++||+
T Consensus 161 --------~~~e~~~~~~-------~~~~~y~~Dp~~pdi~-~~ys~DeFrMy~fKir~C~R~~shDwteCPf~HpgEkA 224 (528)
T KOG1595|consen 161 --------PDDEPEVESK-------LDVTEYPEDPSWPDIN-GIYSSDEFRMYSFKIRRCSRPRSHDWTECPFAHPGEKA 224 (528)
T ss_pred --------cCCCcccccc-------cccccccCCCCccccc-ccccccceEEEeeeecccCCccCCCcccCCccCCCccc
Confidence 0000000000 0112899999999999 99999999999999999999999999999999999999
Q ss_pred cCCCCcCCcccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCCCCCCCCccccCCCCCCcCCCCcCCCCC
Q 005270 268 RRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDETNCNRRVCFFAHKPEELRPLYASTGSA 347 (705)
Q Consensus 268 RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~~~C~~~~C~FaH~~~elr~~~~~~~~~ 347 (705)
||||||+|+|.+++||+|+||.|++||.|+||||+||||+||++|||++|+++++|+|++|||||.++|||+++.++|+.
T Consensus 225 RRRDPRkyhYs~tpCPefrkG~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkDg~~C~RrvCfFAH~~eqLR~l~~s~~s~ 304 (528)
T KOG1595|consen 225 RRRDPRKYHYSSTPCPEFRKGSCERGDSCEYAHGVFECWLHPARYRTRKCKDGGYCPRRVCFFAHSPEQLRPLPPSTGSD 304 (528)
T ss_pred ccCCcccccccCccCcccccCCCCCCCccccccceehhhcCHHHhccccccCCCCCccceEeeecChHHhcccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC---CCCCCCCCc-cccccc
Q 005270 348 VPS-PRSFSANGSSFDMLSISPLALGSPSAMIPPTSTPPLTPSGASS--PMGGTMWNQPNI---APPTLQLPG-SRLKSA 420 (705)
Q Consensus 348 ~~s-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~--~~~~~~~~~~~~---~~p~l~l~~-srl~~~ 420 (705)
+++ |++++++ -.+ +...+.+.+|++.+||++|.+++. ++..++|.+.++ +.|+++|++ |||++.
T Consensus 305 ~~~sp~~s~~s---p~~------~~~~~~~~s~~~~~~p~sp~~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~Srl~s~ 375 (528)
T KOG1595|consen 305 RPSSPSSSSAS---PMM------ASLRSLPFSPSPGSPPLSPSANGVSSPIASGGSRSLNSNSPSSPAAPLRSFSRLSSS 375 (528)
T ss_pred CCCCcccccCC---CCc------cccccCCCCCCCCCCCCCccccccccccccccccccCCCCCCCcccccccccccccc
Confidence 986 6654321 111 222233344455899999987655 445667766664 789999999 899999
Q ss_pred ccccccchhhhhhhhhHHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCCCCcCCCCCccCCCCCCchhhhhccCCCCCC
Q 005270 421 RNARDMEFDMELLGLENRRRQQQLIDEISSLSSPSGWANSLSSAAPFSSSADRTGDMNRIGGVKPTNLDDIFGSLNPTLM 500 (705)
Q Consensus 421 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (705)
++||||+..+++ + + -||+++|++++.+
T Consensus 376 ~~a~~i~~~~~~---~----------------------------------------~--------~~l~~~f~s~~ss-- 402 (528)
T KOG1595|consen 376 LSAADISMSSPM---N----------------------------------------L--------GNLSELFSSPDSS-- 402 (528)
T ss_pred cccccccccccc---c----------------------------------------c--------ccchhhhcCcccc--
Confidence 999998554322 1 0 0899999998662
Q ss_pred CcccccccccccccccCCchhhhh-hhhhhhhhcCCCCCCCCCCCC---CCCCcCCcchhhh--hhhhhhh-HHHHhhh-
Q 005270 501 PQLQGTSLDASASQLQSPTGIQMR-QNMNQQLRSSYPASSSPVRPS---QSFGIDTSGATAA--AVLSSRS-AAFAKRS- 572 (705)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~q~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~r~-~a~a~r~- 572 (705)
+.-+++|.. +.+ .+|+.++ ..++++.+..... .+|++|. .++++|+
T Consensus 403 ---------------sl~~~~~~~~~~~-----------tsP~~~~~~~~~~~~e~s~~~~~~~~~~~~r~l~~~l~~~~ 456 (528)
T KOG1595|consen 403 ---------------SLNPQLQVLSSAP-----------TSPVFTDTASFGSSVESSPAMEGRSQVMSSRELRASLKRSS 456 (528)
T ss_pred ---------------ccchhhhhcccCC-----------cCCcCCcccccccccccchhhhcccccccchhhhhhhcccc
Confidence 233444432 122 3455542 2244555544444 6899997 8888776
Q ss_pred -hhhhhcccccCCCCCCCCCCcCCCCCCCCCCCCCCCC-CCccccChhhhhcccccCCccccCCCCCcCccCCCCCCCCC
Q 005270 573 -QSFIERNTVSRHSGFSSPDSTAAVMPSNLADWGSPDG-KLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATAD 650 (705)
Q Consensus 573 -~~~~~r~~~~~~~~~~~~~~~~~~~~~~~s~wgs~~g-k~dw~~~~~el~~lr~s~sf~~~~~~~~~~~~~~~~~~~~~ 650 (705)
.++ +.+.+.+ +.-....+|||+.+| |+||+||+|||+|+|++.||+.+.++
T Consensus 457 ~~s~--------~~~~~~~----~~~~~~~~d~g~~~g~~~d~~~~~~~l~~~r~~~s~~~~~~~--------------- 509 (528)
T KOG1595|consen 457 TLSD--------KPAMNSS----GQFSFNNSDWGPRAGELLDWGVQSDLLNKLRESTSFELGSAG--------------- 509 (528)
T ss_pred cccc--------cccccCc----cccccccCCcCcccCcccchhhhHHHHhhcccCcccccCCCC---------------
Confidence 322 2111111 111234589999999 99999999999999999999987654
Q ss_pred CCCcccchhcccCCC
Q 005270 651 EPDVSWVQSLVRDSP 665 (705)
Q Consensus 651 epd~swv~slvk~~~ 665 (705)
||||||||+||||.+
T Consensus 510 ~pd~swv~~ll~~~~ 524 (528)
T KOG1595|consen 510 EPDVSWVQSLLKEPA 524 (528)
T ss_pred CcCcchhhhhccccc
Confidence 999999999999986
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=9.3e-21 Score=182.73 Aligned_cols=147 Identities=22% Similarity=0.224 Sum_probs=128.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++-++||.++..|..+.+..+|.+.+..+|.+| ..|+||||+||..|+.++|+.|+.+.++|+|..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkD-------------daGWtPlhia~s~g~~evVk~Ll~r~~advna~- 102 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKD-------------DAGWTPLHIAASNGNDEVVKELLNRSGADVNAT- 102 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCcc-------------ccCCchhhhhhhcCcHHHHHHHhcCCCCCccee-
Confidence 556888888888888888777777888888887 899999999999999999999999933999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
+..|.|+||||+..|. .+|+++|++.|+.|+++|..|.||||-|+. .|..+++++|+..|+.++. .|..
T Consensus 103 tn~G~T~LHyAagK~r---~eIaqlLle~ga~i~~kD~~~qtplHRAAa------vGklkvie~Li~~~a~~n~--qDk~ 171 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGR---LEIAQLLLEKGALIRIKDKQGQTPLHRAAA------VGKLKVIEYLISQGAPLNT--QDKY 171 (226)
T ss_pred cCCCcceehhhhcCCh---hhHHHHHHhcCCCCcccccccCchhHHHHh------ccchhhHHHHHhcCCCCCc--cccc
Confidence 9999999999999999 999999999999999999999999999998 8999999999999999844 4444
Q ss_pred hhhHHHHHHhhc
Q 005270 188 CDQVVYKMEEQE 199 (705)
Q Consensus 188 ~~~~~~~~l~~e 199 (705)
+.+++.+.+..+
T Consensus 172 G~TpL~~al~e~ 183 (226)
T KOG4412|consen 172 GFTPLHHALAEG 183 (226)
T ss_pred CccHHHHHHhcc
Confidence 455566665544
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=5e-20 Score=177.68 Aligned_cols=137 Identities=19% Similarity=0.274 Sum_probs=126.8
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
...+++|||.||..|+.+.++.+|..-|+|+|..+ ..|+|+||||+..|..+|+++||++| +.|+.
T Consensus 69 DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t-------------n~G~T~LHyAagK~r~eIaqlLle~g-a~i~~ 134 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT-------------NGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRI 134 (226)
T ss_pred cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec-------------CCCcceehhhhcCChhhHHHHHHhcC-CCCcc
Confidence 45678999999999999888888886699999998 89999999999999999999999999 99999
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccc
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEID 185 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~ 185 (705)
+ |..|.||||-|+.-|. ++++++|+..|+.+|..|..|+||||.|.. .++.++..+|+++||++.+.+.+
T Consensus 135 k-D~~~qtplHRAAavGk---lkvie~Li~~~a~~n~qDk~G~TpL~~al~------e~~~d~a~lLV~~gAd~~~edke 204 (226)
T KOG4412|consen 135 K-DKQGQTPLHRAAAVGK---LKVIEYLISQGAPLNTQDKYGFTPLHHALA------EGHPDVAVLLVRAGADTDREDKE 204 (226)
T ss_pred c-ccccCchhHHHHhccc---hhhHHHHHhcCCCCCcccccCccHHHHHHh------ccCchHHHHHHHhccceeecccc
Confidence 8 9999999999999999 999999999999999999999999999965 78999999999999999665554
Q ss_pred c
Q 005270 186 N 186 (705)
Q Consensus 186 ~ 186 (705)
.
T Consensus 205 ~ 205 (226)
T KOG4412|consen 205 G 205 (226)
T ss_pred C
Confidence 3
No 4
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.80 E-value=2e-19 Score=200.75 Aligned_cols=175 Identities=25% Similarity=0.314 Sum_probs=124.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
....++.|+..|+++.++++++..|.+++..| .+|.|+||+||.+++++++++||++| +|||...+
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D-------------~~g~tlLHWAAiNNrl~v~r~li~~g-advn~~gG 109 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPD-------------REGVTLLHWAAINNRLDVARYLISHG-ADVNAIGG 109 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCC-------------cCCccceeHHHHcCcHHHHHHHHHcC-CCccccCC
Confidence 34567778888888888888886688888877 68888888888888888888888888 88888755
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccch
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLC 188 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~ 188 (705)
.-+.||||||+++|+ +.+|++|+++|||++.+|..|.+|||+|+. .++.-+|-+||.+|++++..|...
T Consensus 110 ~l~stPLHWAar~G~---~~vv~lLlqhGAdpt~~D~~G~~~lHla~~------~~~~~~vayll~~~~d~d~~D~~g-- 178 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGH---ISVVDLLLQHGADPTLKDKQGLTPLHLAAQ------FGHTALVAYLLSKGADIDLRDNNG-- 178 (600)
T ss_pred CCCCCcchHHHHcCc---HHHHHHHHHcCCCCceecCCCCcHHHHHHH------hCchHHHHHHHHhcccCCCcCCCC--
Confidence 778888888888888 888888888888888888888888888877 778888888888887774443322
Q ss_pred hhHHHHHHhhcCCCCccchhcccc-------ccccCCCcccccCCCcC
Q 005270 189 DQVVYKMEEQEQPEISTPRVLKDG-------AEKKEYPVDLTLPDIKN 229 (705)
Q Consensus 189 ~~~~~~~l~~e~~~~~~~~ll~~~-------~~kke~Pldlalpd~~~ 229 (705)
.+.....+-......+..|++.+ .++|.||++.++-..+.
T Consensus 179 -rTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~ 225 (600)
T KOG0509|consen 179 -RTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNL 225 (600)
T ss_pred -CCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCc
Confidence 22223333222222133444432 36677777766655544
No 5
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.80 E-value=2.3e-19 Score=200.22 Aligned_cols=173 Identities=25% Similarity=0.276 Sum_probs=139.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++++.||.||.++.++.++.+|+ +|++||..+ +.-+.||||+||++|++.+|++|+++| ||++.+
T Consensus 77 ~g~tlLHWAAiNNrl~v~r~li~-~gadvn~~g------------G~l~stPLHWAar~G~~~vv~lLlqhG-Adpt~~- 141 (600)
T KOG0509|consen 77 EGVTLLHWAAINNRLDVARYLIS-HGADVNAIG------------GVLGSTPLHWAARNGHISVVDLLLQHG-ADPTLK- 141 (600)
T ss_pred CCccceeHHHHcCcHHHHHHHHH-cCCCccccC------------CCCCCCcchHHHHcCcHHHHHHHHHcC-CCCcee-
Confidence 66777777777777766655555 999999998 578999999999999999999999999 999999
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
|.+|.|+||.|+..|+ .-+|-+||.+|+|+|.+|.+|+||||+|+. ++....++.||+.|+.+...+. .-
T Consensus 142 D~~G~~~lHla~~~~~---~~~vayll~~~~d~d~~D~~grTpLmwAay------kg~~~~v~~LL~f~a~~~~~d~-~~ 211 (600)
T KOG0509|consen 142 DKQGLTPLHLAAQFGH---TALVAYLLSKGADIDLRDNNGRTPLMWAAY------KGFALFVRRLLKFGASLLLTDD-NH 211 (600)
T ss_pred cCCCCcHHHHHHHhCc---hHHHHHHHHhcccCCCcCCCCCCHHHHHHH------hcccHHHHHHHHhccccccccc-cc
Confidence 9999999999999999 999999999999999999999999999998 7777779999999999944442 22
Q ss_pred hhhHHHHHHhhcCCCCccchhcccc------ccccCCCcccccCC
Q 005270 188 CDQVVYKMEEQEQPEISTPRVLKDG------AEKKEYPVDLTLPD 226 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~~~ll~~~------~~kke~Pldlalpd 226 (705)
+.+++..++...+..... .+++.+ +.++++|++++...
T Consensus 212 g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 212 GNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred CCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence 233444444444444444 444432 66689999998544
No 6
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.77 E-value=4.1e-18 Score=166.71 Aligned_cols=132 Identities=15% Similarity=0.231 Sum_probs=116.2
Q ss_pred cchHHHHHHHHhCCHHHHHH---HHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHH---HHHHHHcCCC
Q 005270 28 YNFSILLELTASDDLDGFRK---AIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDV---VSYVIKSGHV 101 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~---lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~v---Vk~LL~~G~a 101 (705)
++.++|++||..|+++.+++ +|.+.|.+++..+ ..|+||||+|+.+|+.++ +++|++.| +
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d-------------~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-a 84 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYD-------------HHGRQCTHMVAWYDRANAVMKIELLVNMG-A 84 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccC-------------CCCCcHHHHHHHhCccCHHHHHHHHHHcC-C
Confidence 34578999999999976655 4556788888887 899999999999988654 89999999 9
Q ss_pred CcccccC-CCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 102 DVNRACG-SDGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 102 DVn~~~d-~~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
++|.+ + ..|.||||+|+..|+ .+++++|+. .|++++.+|..|.||||+|+. .++.+++++|+.+|+++
T Consensus 85 din~~-d~~~g~TpLh~A~~~g~---~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~------~~~~~iv~~Ll~~ga~~ 154 (166)
T PHA02743 85 DINAR-ELGTGNTLLHIAASTKN---YELAEWLCRQLGVNLGAINYQHETAYHIAYK------MRDRRMMEILRANGAVC 154 (166)
T ss_pred CCCCC-CCCCCCcHHHHHHHhCC---HHHHHHHHhccCCCccCcCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCC
Confidence 99998 6 589999999999999 999999995 899999999999999999998 88999999999999999
Q ss_pred Cccc
Q 005270 180 CVEE 183 (705)
Q Consensus 180 ~~~~ 183 (705)
+..+
T Consensus 155 ~~~~ 158 (166)
T PHA02743 155 DDPL 158 (166)
T ss_pred CCcc
Confidence 4433
No 7
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.77 E-value=5e-18 Score=172.24 Aligned_cols=134 Identities=21% Similarity=0.321 Sum_probs=112.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCcccc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG--SKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G--~~~vVk~LL~~G~aDVn~~ 106 (705)
.+++|+.|+..|+.+.++.++. . ++..+ ..|.||||+|+..+ +.+++++|++.| +|+|.+
T Consensus 21 ~~~pL~~A~~~~~~~~vk~Li~-~---~n~~~-------------~~g~TpLh~a~~~~~~~~eiv~~Ll~~g-advn~~ 82 (209)
T PHA02859 21 YCNPLFYYVEKDDIEGVKKWIK-F---VNDCN-------------DLYETPIFSCLEKDKVNVEILKFLIENG-ADVNFK 82 (209)
T ss_pred cCcHHHHHHHhCcHHHHHHHHH-h---hhccC-------------ccCCCHHHHHHHcCCCCHHHHHHHHHCC-CCCCcc
Confidence 4688999999999999988875 2 45555 78999999999854 899999999999 999988
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcccc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
.+..|.||||+|+..+.....+++++|+++|+|+|.+|..|.||||+|+. ...++.+++++|+++|++++..+.
T Consensus 83 ~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~----~~~~~~~iv~~Li~~gadin~~d~ 156 (209)
T PHA02859 83 TRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMC----NFNVRINVIKLLIDSGVSFLNKDF 156 (209)
T ss_pred CCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----hccCCHHHHHHHHHcCCCcccccC
Confidence 33589999999886431112899999999999999999999999999875 234689999999999999965443
No 8
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.2e-17 Score=188.90 Aligned_cols=132 Identities=25% Similarity=0.366 Sum_probs=106.1
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHH----------------
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKD---------------- 90 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~---------------- 90 (705)
..++++||.||..|+.+.++.+|. .|+++|..+ ..|+||||+||..|+.+
T Consensus 35 ~~~~tPLh~A~~~g~~e~vk~Ll~-~gadvn~~d-------------~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~ 100 (477)
T PHA02878 35 LIPFIPLHQAVEARNLDVVKSLLT-RGHNVNQPD-------------HRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100 (477)
T ss_pred ccCcchHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHCccHhHHHHHHHHHhcccccc
Confidence 356788999999999888877776 899999887 78888888888765432
Q ss_pred ------------------------------------------------HHHHHHHcCCCCcccccCCC-CChHHHHHHhC
Q 005270 91 ------------------------------------------------VVSYVIKSGHVDVNRACGSD-GVTALHCAASG 121 (705)
Q Consensus 91 ------------------------------------------------vVk~LL~~G~aDVn~~~d~~-G~TpLH~Aa~~ 121 (705)
++++|++.| +|+|.. +.. |.||||+|+..
T Consensus 101 ~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~g-adin~~-~~~~g~tpLh~A~~~ 178 (477)
T PHA02878 101 TLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYG-ADINMK-DRHKGNTALHYATEN 178 (477)
T ss_pred chhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcC-CCCCcc-CCCCCCCHHHHHHhC
Confidence 556666677 788877 666 88888888888
Q ss_pred CCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 122 GSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 122 G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 179 ~~---~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~------~~~~~iv~~Ll~~ga~in~~d 231 (477)
T PHA02878 179 KD---QRLTELLLSYGANVNIPDKTNNSPLHHAVK------HYNKPIVHILLENGASTDARD 231 (477)
T ss_pred CC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------hCCHHHHHHHHHcCCCCCCCC
Confidence 88 888888888888888888888888888887 788888888888888885443
No 9
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.73 E-value=4.6e-17 Score=165.21 Aligned_cols=130 Identities=19% Similarity=0.152 Sum_probs=110.0
Q ss_pred cchHHHHHHHHhC-CHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCc
Q 005270 28 YNFSILLELTASD-DLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMF---GSKDVVSYVIKSGHVDV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~g-d~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~---G~~~vVk~LL~~G~aDV 103 (705)
.+.++|+.++..+ +...+.++|.+.|+++|..+ +..|.||||+|+.. ++.+++++|+++| +|+
T Consensus 50 ~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~------------~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g-adi 116 (209)
T PHA02859 50 LYETPIFSCLEKDKVNVEILKFLIENGADVNFKT------------RDNNLSALHHYLSFNKNVEPEILKILIDSG-SSI 116 (209)
T ss_pred cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC------------CCCCCCHHHHHHHhCccccHHHHHHHHHCC-CCC
Confidence 4568888777654 23455566666999999986 35899999998864 4799999999999 999
Q ss_pred ccccCCCCChHHHHHHhC--CCCChHHHHHHHHHCCCCCcccCCCCCCHHHHH-HhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 104 NRACGSDGVTALHCAASG--GSANSVEVVKLLLDASADVNSVDAYGNRPADLI-AKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~--G~~~~~eivklLL~~GAdin~~D~~G~TPLh~A-a~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
|.+ +.+|.||||+|+.. ++ .+++++|++.|++++.+|.+|.||||.+ +. .++.+++++|+++|++++
T Consensus 117 n~~-d~~G~TpLh~a~~~~~~~---~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~------~~~~~iv~~Ll~~Gadi~ 186 (209)
T PHA02859 117 TEE-DEDGKNLLHMYMCNFNVR---INVIKLLIDSGVSFLNKDFDNNNILYSYILF------HSDKKIFDFLTSLGIDIN 186 (209)
T ss_pred CCc-CCCCCCHHHHHHHhccCC---HHHHHHHHHcCCCcccccCCCCcHHHHHHHh------cCCHHHHHHHHHcCCCCC
Confidence 998 99999999998764 56 9999999999999999999999999964 44 678999999999999993
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.73 E-value=4.4e-17 Score=172.84 Aligned_cols=131 Identities=21% Similarity=0.177 Sum_probs=76.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..|+.+.++.++ +.|++++..+ ..|+||||+|+..|+.++|++|++.| ++++.. +
T Consensus 61 ~~TpLh~Aa~~g~~eiV~lLL-~~Gadvn~~d-------------~~G~TpLh~Aa~~g~~eivk~Ll~~g-adin~~-~ 124 (284)
T PHA02791 61 NEFPLHQAATLEDTKIVKILL-FSGMDDSQFD-------------DKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFY-G 124 (284)
T ss_pred CCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCcc-C
Confidence 456666666666655554444 4777777766 55555555555555555555555555 555443 3
Q ss_pred CC---------------------------------CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCH-HHHH
Q 005270 109 SD---------------------------------GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRP-ADLI 154 (705)
Q Consensus 109 ~~---------------------------------G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TP-Lh~A 154 (705)
.. |.||||+|+..|+ .+++++||++||+++.+|..|.|| ||+|
T Consensus 125 ~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~---~eiv~lLL~~gAd~n~~d~~g~t~~L~~A 201 (284)
T PHA02791 125 KTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGH---VDMMILLLDYMTSTNTNNSLLFIPDIKLA 201 (284)
T ss_pred CCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCC---HHHHHHHHHCCCCCCcccCCCCChHHHHH
Confidence 33 4555555555555 566666666666666666655554 6666
Q ss_pred HhhCccCCCChHHHHHHHHhCCCCCCcccc
Q 005270 155 AKNCNLGFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 155 a~~~~~~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
+. .++.+++++|+++|++++..+.
T Consensus 202 a~------~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 202 ID------NKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred HH------cCCHHHHHHHHHCCCCCccCcc
Confidence 55 5566666666666666644433
No 11
>PHA02791 ankyrin-like protein; Provisional
Probab=99.73 E-value=4.9e-17 Score=172.48 Aligned_cols=126 Identities=17% Similarity=0.156 Sum_probs=110.4
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.++ +.|++++..+ |.||||+|+..|+.++|++|+..| ++++..
T Consensus 28 ~~G~TpLh~Aa~~g~~eiv~~Ll-~~ga~~n~~d---------------~~TpLh~Aa~~g~~eiV~lLL~~G-advn~~ 90 (284)
T PHA02791 28 VHGHSALYYAIADNNVRLVCTLL-NAGALKNLLE---------------NEFPLHQAATLEDTKIVKILLFSG-MDDSQF 90 (284)
T ss_pred CCCCcHHHHHHHcCCHHHHHHHH-HCcCCCcCCC---------------CCCHHHHHHHCCCHHHHHHHHHCC-CCCCCC
Confidence 35678888888888877665555 5888887643 589999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCC-CHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGN-RPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~-TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|+||||+|+..|+ .+++++|+++|++++.++..|+ ||||+|+. .++.+++++||+++.+.
T Consensus 91 -d~~G~TpLh~Aa~~g~---~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~------~g~~eivk~LL~~~~~~ 154 (284)
T PHA02791 91 -DDKGNTALYYAVDSGN---MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM------LNDVSIVSYFLSEIPST 154 (284)
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCcCccCCCCCcHHHHHHHH------cCCHHHHHHHHhcCCcc
Confidence 9999999999999999 9999999999999999998885 89999988 88999999999887654
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.72 E-value=5.6e-17 Score=179.71 Aligned_cols=144 Identities=18% Similarity=0.186 Sum_probs=111.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCc------ccccc---------------ccCccCCCCCChHHHHHHHc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGL------WYGRI---------------IGSRKMGFEERTPLMIASMF 86 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dl------wyg~~---------------~~s~~~~~~G~TPLh~AA~~ 86 (705)
++.++|+.|+..++.+.++.++ +.|++++..+. .+... ......+..|+||||+|+..
T Consensus 34 ~g~tpL~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 112 (413)
T PHA02875 34 DGISPIKLAMKFRDSEAIKLLM-KHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATIL 112 (413)
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-hCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHh
Confidence 4556666666666665554433 36666655420 00000 00112246789999999999
Q ss_pred CCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChH
Q 005270 87 GSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRK 166 (705)
Q Consensus 87 G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~ 166 (705)
|+.+++++|++.| +|++.. +..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.
T Consensus 113 ~~~~iv~~Ll~~g-ad~~~~-~~~g~tpLh~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~------~g~~ 181 (413)
T PHA02875 113 KKLDIMKLLIARG-ADPDIP-NTDKFSPLHLAVMMGD---IKGIELLIDHKACLDIEDCCGCTPLIIAMA------KGDI 181 (413)
T ss_pred CCHHHHHHHHhCC-CCCCCC-CCCCCCHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCCCCHHHHHHH------cCCH
Confidence 9999999999999 999988 8899999999999999 999999999999999999999999999998 8899
Q ss_pred HHHHHHHhCCCCCCccc
Q 005270 167 KVLQALLKGSGTGCVEE 183 (705)
Q Consensus 167 eivelLL~~Gadi~~~~ 183 (705)
+++++|+++|++++..+
T Consensus 182 eiv~~Ll~~ga~~n~~~ 198 (413)
T PHA02875 182 AICKMLLDSGANIDYFG 198 (413)
T ss_pred HHHHHHHhCCCCCCcCC
Confidence 99999999999995433
No 13
>PHA02741 hypothetical protein; Provisional
Probab=99.72 E-value=5.5e-17 Score=158.96 Aligned_cols=129 Identities=19% Similarity=0.196 Sum_probs=114.3
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHH-----hcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC----HHHHHHHHH
Q 005270 27 CYNFSILLELTASDDLDGFRKAIE-----EDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS----KDVVSYVIK 97 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~-----e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~----~~vVk~LL~ 97 (705)
.++.++||.||..|+.+.++.++. ..|++++..+ ..|.||||+|+..|+ .+++++|+.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d-------------~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~ 85 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATD-------------DAGQMCIHIAAEKHEAQLAAEIIDHLIE 85 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccC-------------CCCCcHHHHHHHcCChHHHHHHHHHHHH
Confidence 356788999999999988887754 2367788776 889999999999999 589999999
Q ss_pred cCCCCcccccCC-CCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 98 SGHVDVNRACGS-DGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 98 ~G~aDVn~~~d~-~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
.| +++|.+ +. .|+||||+|+..++ .+++++||+ .|++++..|.+|.||||+|+. .++.+++++|+++
T Consensus 86 ~g-adin~~-~~~~g~TpLh~A~~~~~---~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~------~~~~~iv~~L~~~ 154 (169)
T PHA02741 86 LG-ADINAQ-EMLEGDTALHLAAHRRD---HDLAEWLCCQPGIDLHFCNADNKSPFELAID------NEDVAMMQILREI 154 (169)
T ss_pred cC-CCCCCC-CcCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCCcCCCCCCCHHHHHHH------CCCHHHHHHHHHH
Confidence 99 999998 64 89999999999999 999999997 599999999999999999998 8899999999998
Q ss_pred CCCC
Q 005270 176 SGTG 179 (705)
Q Consensus 176 Gadi 179 (705)
++..
T Consensus 155 ~~~~ 158 (169)
T PHA02741 155 VATS 158 (169)
T ss_pred HHHh
Confidence 7654
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.72 E-value=2.6e-17 Score=158.25 Aligned_cols=139 Identities=14% Similarity=0.086 Sum_probs=111.7
Q ss_pred cCCChhhhhccCcchHHHHHHHHhCCHHHHHHHHHhcCCC-----CcccCccccccccCccCCCCCChHHHHHHHcCCH-
Q 005270 16 MDTDSQKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHD-----IDESGLWYGRIIGSRKMGFEERTPLMIASMFGSK- 89 (705)
Q Consensus 16 medk~~~~~~~~~~~s~LL~aAa~gd~~~v~~lL~e~Gad-----vn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~- 89 (705)
|||...-.....++.++||+|+..|+...+..... ...+ ++.. +..|.||||+|+..|+.
T Consensus 4 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~-~~~~~~~~~~~~~-------------d~~g~t~Lh~a~~~~~~~ 69 (154)
T PHA02736 4 PEEIIFASEPDIEGENILHYLCRNGGVTDLLAFKN-AISDENRYLVLEY-------------NRHGKQCVHIVSNPDKAD 69 (154)
T ss_pred cchhhHHHhcCCCCCCHHHHHHHhCCHHHHHHHHH-HhcchhHHHHHHh-------------cCCCCEEEEeecccCchh
Confidence 44444333334568899999999998544322211 1111 2233 48899999999999987
Q ss_pred --HHHHHHHHcCCCCcccccC-CCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCCh
Q 005270 90 --DVVSYVIKSGHVDVNRACG-SDGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSR 165 (705)
Q Consensus 90 --~vVk~LL~~G~aDVn~~~d-~~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~ 165 (705)
+++++|++.| +|+|.+ + ..|+||||+|+..|+ .+++++|+. .|++++.+|..|.||||+|+. .++
T Consensus 70 ~~e~v~~Ll~~g-adin~~-~~~~g~T~Lh~A~~~~~---~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~------~~~ 138 (154)
T PHA02736 70 PQEKLKLLMEWG-ADINGK-ERVFGNTPLHIAVYTQN---YELATWLCNQPGVNMEILNYAFKTPYYVACE------RHD 138 (154)
T ss_pred HHHHHHHHHHcC-CCcccc-CCCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCccccCCCCCHHHHHHH------cCC
Confidence 4688999999 999998 6 589999999999999 999999998 599999999999999999998 899
Q ss_pred HHHHHHHHhCCCCC
Q 005270 166 KKVLQALLKGSGTG 179 (705)
Q Consensus 166 ~eivelLL~~Gadi 179 (705)
.+++++|+.+|++.
T Consensus 139 ~~i~~~Ll~~ga~~ 152 (154)
T PHA02736 139 AKMMNILRAKGAQC 152 (154)
T ss_pred HHHHHHHHHcCCCC
Confidence 99999999999987
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.4e-16 Score=176.47 Aligned_cols=130 Identities=21% Similarity=0.285 Sum_probs=116.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++. .|++++..+ ..|.||||+|+..|+.+++++|+++| ++++..
T Consensus 101 ~g~tpL~~A~~~~~~~iv~~Ll~-~gad~~~~~-------------~~g~tpLh~A~~~~~~~~v~~Ll~~g-~~~~~~- 164 (413)
T PHA02875 101 DGMTPLHLATILKKLDIMKLLIA-RGADPDIPN-------------TDKFSPLHLAVMMGDIKGIELLIDHK-ACLDIE- 164 (413)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHh-CCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHhcC-CCCCCC-
Confidence 35678888888777766655544 888888887 88999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCC-CHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGN-RPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~-TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+..|.||||+|+..|+ .+++++|++.|++++..+..|. ||+|+|+. .++.+++++|+++|+++++.
T Consensus 165 d~~g~TpL~~A~~~g~---~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~------~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 165 DCCGCTPLIIAMAKGD---IAICKMLLDSGANIDYFGKNGCVAALCYAIE------NNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCcCCCCCCchHHHHHHH------cCCHHHHHHHHHCCcCcchH
Confidence 9999999999999999 9999999999999999998875 88999998 89999999999999999654
No 16
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.69 E-value=2.3e-16 Score=189.84 Aligned_cols=134 Identities=22% Similarity=0.253 Sum_probs=116.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
..++|+.||..|+.+.++.+|. .|+++|..| ..|+||||+||..|+.+++++|+++| +|+|.+ |
T Consensus 525 ~~~~L~~Aa~~g~~~~l~~Ll~-~G~d~n~~d-------------~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adin~~-d 588 (823)
T PLN03192 525 MASNLLTVASTGNAALLEELLK-AKLDPDIGD-------------SKGRTPLHIAASKGYEDCVLVLLKHA-CNVHIR-D 588 (823)
T ss_pred chhHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcChHHHHHHHHhcC-CCCCCc-C
Confidence 3578999999999888777665 899999987 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCC----------------------------hHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCcc
Q 005270 109 SDGVTALHCAASGGSAN----------------------------SVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNL 160 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~----------------------------~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~ 160 (705)
.+|+||||+|+..|+.. ..+++++|+++|+|+|.+|.+|+||||+|+.
T Consensus 589 ~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~---- 664 (823)
T PLN03192 589 ANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMA---- 664 (823)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH----
Confidence 99999999776665511 1567778889999999999999999999998
Q ss_pred CCCChHHHHHHHHhCCCCCCcccc
Q 005270 161 GFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 161 ~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
.++.+++++|+++|++++..+.
T Consensus 665 --~g~~~iv~~Ll~~GAdv~~~~~ 686 (823)
T PLN03192 665 --EDHVDMVRLLIMNGADVDKANT 686 (823)
T ss_pred --CCcHHHHHHHHHcCCCCCCCCC
Confidence 8999999999999999955443
No 17
>PHA02946 ankyin-like protein; Provisional
Probab=99.69 E-value=2e-16 Score=178.00 Aligned_cols=194 Identities=18% Similarity=0.253 Sum_probs=130.6
Q ss_pred hHHHHHHHH-hCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 30 FSILLELTA-SDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 30 ~s~LL~aAa-~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
++.||.++. .+....+.++|++.|+++|.++ .+|+||||+|+..|+.++|++||++| +|+|.+ +
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~G~TpLh~Aa~~g~~eiv~lLL~~G-Adin~~-d 102 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETD-------------DDGNYPLHIASKINNNRIVAMLLTHG-ADPNAC-D 102 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccC-------------CCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCC-C
Confidence 455665544 3444556666677899999887 88999999999999999999999998 999987 8
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNS-VDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~-~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
.+|.||||+|+..+. ...+++++|+++|++++. .|..|.||||. +. .++.+++++|+++|++++..+. .
T Consensus 103 ~~g~TpLh~A~~~~~-~~~e~v~lLl~~Gadin~~~d~~g~tpL~a-a~------~~~~~vv~~Ll~~gad~~~~d~--~ 172 (446)
T PHA02946 103 KQHKTPLYYLSGTDD-EVIERINLLVQYGAKINNSVDEEGCGPLLA-CT------DPSERVFKKIMSIGFEARIVDK--F 172 (446)
T ss_pred CCCCCHHHHHHHcCC-chHHHHHHHHHcCCCcccccCCCCCcHHHH-HH------CCChHHHHHHHhccccccccCC--C
Confidence 899999999887653 237889999999999984 68889999974 43 5778899999999888854443 3
Q ss_pred hhhHHHHHHhhcCCCCccc-hhccc------cccccCCCcccccCCCcCC-------ccccccccccccccccCc
Q 005270 188 CDQVVYKMEEQEQPEISTP-RVLKD------GAEKKEYPVDLTLPDIKNG-------IYGTDEFRMYTFKVKPCS 248 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~~-~ll~~------~~~kke~Pldlalpd~~~~-------~y~sdefrm~sfKv~PCs 248 (705)
+..++...+.......... .|+.. .+..+.+|++++....... ..+.+.......+.+|+.
T Consensus 173 G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~gadin~~d~~G~TpLh 247 (446)
T PHA02946 173 GKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLT 247 (446)
T ss_pred CCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3333333333222222211 12221 2556788888877542110 123444445555555544
No 18
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.2e-16 Score=176.46 Aligned_cols=130 Identities=28% Similarity=0.384 Sum_probs=93.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcC--------
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSG-------- 99 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G-------- 99 (705)
++.++|+.|+..|+.+.++.+| +.|+++|..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 34 ~~~tpL~~A~~~g~~~iv~~Ll-~~Ga~~n~~~-------------~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~ 99 (434)
T PHA02874 34 ETTTPLIDAIRSGDAKIVELFI-KHGADINHIN-------------TKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPI 99 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchh
Confidence 4568888888888887776665 4899999876 66777777777777777777776654
Q ss_pred --------------CCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCCh
Q 005270 100 --------------HVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSR 165 (705)
Q Consensus 100 --------------~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~ 165 (705)
++|++.. +..|.||||+|+..|+ .+++++|++.|++++.+|..|.||||+|+. .++
T Consensus 100 ~~~~~~~i~~ll~~g~d~n~~-~~~g~T~Lh~A~~~~~---~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~------~~~ 169 (434)
T PHA02874 100 PCIEKDMIKTILDCGIDVNIK-DAELKTFLHYAIKKGD---LESIKMLFEYGADVNIEDDNGCYPIHIAIK------HNF 169 (434)
T ss_pred ccCCHHHHHHHHHCcCCCCCC-CCCCccHHHHHHHCCC---HHHHHHHHhCCCCCCCcCCCCCCHHHHHHH------CCc
Confidence 0234444 6667777777777777 777777777777777777777777777776 667
Q ss_pred HHHHHHHHhCCCCCCc
Q 005270 166 KKVLQALLKGSGTGCV 181 (705)
Q Consensus 166 ~eivelLL~~Gadi~~ 181 (705)
.+++++|+++|++++.
T Consensus 170 ~~iv~~Ll~~g~~~n~ 185 (434)
T PHA02874 170 FDIIKLLLEKGAYANV 185 (434)
T ss_pred HHHHHHHHHCCCCCCC
Confidence 7777777777776643
No 19
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.4e-16 Score=176.19 Aligned_cols=144 Identities=21% Similarity=0.173 Sum_probs=118.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCcc----------ccccccCccCCCCCChHHHHHHHcCCHHHHHHHHH
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLW----------YGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK 97 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlw----------yg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~ 97 (705)
.+.++|+.|+..|+.+.++.++. .|+++...... .......+..+..|.||||+|+..|+.++|++|++
T Consensus 67 ~~~t~L~~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~ 145 (434)
T PHA02874 67 KIPHPLLTAIKIGAHDIIKLLID-NGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFE 145 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHh
Confidence 34578888888888876655554 77765432210 00111233446899999999999999999999999
Q ss_pred cCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCC
Q 005270 98 SGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 98 ~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Ga 177 (705)
.| +++|.+ +..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+. .++.+++++|+++|+
T Consensus 146 ~g-ad~n~~-d~~g~tpLh~A~~~~~---~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~------~g~~~iv~~Ll~~g~ 214 (434)
T PHA02874 146 YG-ADVNIE-DDNGCYPIHIAIKHNF---FDIIKLLLEKGAYANVKDNNGESPLHNAAE------YGDYACIKLLIDHGN 214 (434)
T ss_pred CC-CCCCCc-CCCCCCHHHHHHHCCc---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHhCCC
Confidence 99 999998 9999999999999999 999999999999999999999999999998 899999999999999
Q ss_pred CCCccc
Q 005270 178 TGCVEE 183 (705)
Q Consensus 178 di~~~~ 183 (705)
+++..+
T Consensus 215 ~i~~~~ 220 (434)
T PHA02874 215 HIMNKC 220 (434)
T ss_pred CCcCCC
Confidence 985443
No 20
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.69 E-value=4.6e-17 Score=175.60 Aligned_cols=125 Identities=26% Similarity=0.323 Sum_probs=112.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
.+.+++|+..++.+++++|.+.|++||... ....|||--||.-|+.++|+||+++| +|++.. +..
T Consensus 85 appLWaAsaAGHl~vVk~L~~~ga~VN~tT-------------~TNStPLraACfDG~leivKyLvE~g-ad~~Ia-nrh 149 (615)
T KOG0508|consen 85 APPLWAASAAGHLEVVKLLLRRGASVNDTT-------------RTNSTPLRAACFDGHLEIVKYLVEHG-ADPEIA-NRH 149 (615)
T ss_pred CchhhHHhccCcHHHHHHHHHhcCcccccc-------------ccCCccHHHHHhcchhHHHHHHHHcC-CCCccc-ccC
Confidence 444555555555556666666999999987 67789999999999999999999999 999998 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|.|.||+||+.|+ .+|+++|++.|||+|.++..|+|+||.++. .|+.+|+++||++|+.+
T Consensus 150 GhTcLmIa~ykGh---~~I~qyLle~gADvn~ks~kGNTALH~caE------sG~vdivq~Ll~~ga~i 209 (615)
T KOG0508|consen 150 GHTCLMIACYKGH---VDIAQYLLEQGADVNAKSYKGNTALHDCAE------SGSVDIVQLLLKHGAKI 209 (615)
T ss_pred CCeeEEeeeccCc---hHHHHHHHHhCCCcchhcccCchHHHhhhh------cccHHHHHHHHhCCcee
Confidence 9999999999999 999999999999999999999999999998 89999999999999998
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.69 E-value=1.8e-16 Score=178.62 Aligned_cols=98 Identities=28% Similarity=0.444 Sum_probs=80.9
Q ss_pred CCCChHHHHHH--HcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCC--CCChHHHHHHHHHCCCCCcccCCCCCC
Q 005270 74 FEERTPLMIAS--MFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGG--SANSVEVVKLLLDASADVNSVDAYGNR 149 (705)
Q Consensus 74 ~~G~TPLh~AA--~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G--~~~~~eivklLL~~GAdin~~D~~G~T 149 (705)
..|.||||+|+ ..|+.++|++|++.| ++++.. +..|.||||+|+..| + .+++++|+++|++++..|..|.|
T Consensus 104 ~~g~tpL~~A~~~~~~~~~iv~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~~~~~---~~iv~~Ll~~g~din~~d~~g~t 178 (480)
T PHA03100 104 NNGITPLLYAISKKSNSYSIVEYLLDNG-ANVNIK-NSDGENLLHLYLESNKID---LKILKLLIDKGVDINAKNRYGYT 178 (480)
T ss_pred CCCCchhhHHHhcccChHHHHHHHHHcC-CCCCcc-CCCCCcHHHHHHHcCCCh---HHHHHHHHHCCCCcccccCCCCC
Confidence 77888888888 888888888888888 888877 788888888888888 6 88888888888888888888888
Q ss_pred HHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 150 PADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 150 PLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
|||+|+. .++.+++++|+++|++++..
T Consensus 179 pL~~A~~------~~~~~iv~~Ll~~ga~~~~~ 205 (480)
T PHA03100 179 PLHIAVE------KGNIDVIKFLLDNGADINAG 205 (480)
T ss_pred HHHHHHH------hCCHHHHHHHHHcCCCccCC
Confidence 8888887 77888888888888887443
No 22
>PHA03095 ankyrin-like protein; Provisional
Probab=99.68 E-value=3.9e-16 Score=175.33 Aligned_cols=130 Identities=28% Similarity=0.359 Sum_probs=77.9
Q ss_pred chHHHHHHHHhC--CHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCccc
Q 005270 29 NFSILLELTASD--DLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG-SKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 29 ~~s~LL~aAa~g--d~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G-~~~vVk~LL~~G~aDVn~ 105 (705)
+.++|+.|+..+ +...+.++|.+.|+++|..+ ..|.||||+|+..| ..+++++|++.| +++|.
T Consensus 47 g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~-------------~~g~TpLh~A~~~~~~~~iv~lLl~~g-a~in~ 112 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPE-------------RCGFTPLHLYLYNATTLDVIKLLIKAG-ADVNA 112 (471)
T ss_pred CCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCC-------------CCCCCHHHHHHHcCCcHHHHHHHHHcC-CCCCC
Confidence 345555555554 24444444445666666665 56666666666666 366666666666 66666
Q ss_pred ccCCCCChHHHHHHh--CCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 106 ACGSDGVTALHCAAS--GGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~--~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
. +..|.||||+|+. .++ .+++++|++.|++++..|..|.||||+|+. ......+++++|+++|++++
T Consensus 113 ~-~~~g~tpLh~a~~~~~~~---~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~----~~~~~~~iv~~Ll~~g~~~~ 181 (471)
T PHA03095 113 K-DKVGRTPLHVYLSGFNIN---PKVIRLLLRKGADVNALDLYGMTPLAVLLK----SRNANVELLRLLIDAGADVY 181 (471)
T ss_pred C-CCCCCCHHHHHhhCCcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHH----cCCCCHHHHHHHHHcCCCCc
Confidence 5 6666666666663 233 566666666666666666666666666654 11334566666666666663
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.2e-16 Score=166.96 Aligned_cols=130 Identities=19% Similarity=0.163 Sum_probs=108.3
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
..++.+++|++|+..+..++.++|.++|+++|..+. ..+..|.||||+|+..|+.+++++|+++| +|+|.
T Consensus 29 d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~---------~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~ 98 (300)
T PHA02884 29 NKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP---------LSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNR 98 (300)
T ss_pred CcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc---------ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCc
Confidence 345667788888776555666667779999998740 01258999999999999999999999999 99998
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
..+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++++.
T Consensus 99 ~~~~~g~TpLh~Aa~~~~---~eivklLL~~GAdin~kd~~G~TpL~~A~~------~~~~~~~~~~~~ 158 (300)
T PHA02884 99 YAEEAKITPLYISVLHGC---LKCLEILLSYGADINIQTNDMVTPIELALM------ICNNFLAFMICD 158 (300)
T ss_pred ccCCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------hCChhHHHHhcC
Confidence 635689999999999999 999999999999999999999999999987 566666665553
No 24
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.7e-16 Score=176.84 Aligned_cols=124 Identities=20% Similarity=0.222 Sum_probs=63.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++||.||..|+.+.++.+|. .|++++..+ ..|.||||+|+..|+.+++++|++.| +++|.+ +
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~-~gad~n~~d-------------~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~-d 231 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLS-YGANVNIPD-------------KTNNSPLHHAVKHYNKPIVHILLENG-ASTDAR-D 231 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCC-C
Confidence 3444555444444444433332 555555544 45555555555555555555555555 555554 5
Q ss_pred CCCChHHHHHHhC-CCCChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 109 SDGVTALHCAASG-GSANSVEVVKLLLDASADVNSVDA-YGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 109 ~~G~TpLH~Aa~~-G~~~~~eivklLL~~GAdin~~D~-~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
..|.||||+|+.. ++ .+++++|+++|++++.++. .|.||||+|+ ++.+++++|+++|+++
T Consensus 232 ~~g~TpLh~A~~~~~~---~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~--------~~~~~v~~Ll~~gadi 293 (477)
T PHA02878 232 KCGNTPLHISVGYCKD---YDILKLLLEHGVDVNAKSYILGLTALHSSI--------KSERKLKLLLEYGADI 293 (477)
T ss_pred CCCCCHHHHHHHhcCC---HHHHHHHHHcCCCCCccCCCCCCCHHHHHc--------cCHHHHHHHHHCCCCC
Confidence 5555555555543 33 5555555555555555543 4555555552 2344555555555555
No 25
>PHA02946 ankyin-like protein; Provisional
Probab=99.68 E-value=2.8e-16 Score=176.76 Aligned_cols=170 Identities=14% Similarity=0.153 Sum_probs=122.9
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCcccccC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG--SKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G--~~~vVk~LL~~G~aDVn~~~d 108 (705)
++||.||..|+.+.++ +|+++|+++|.++ ..|+||||+|+..+ ..+++++|+++| +++|...+
T Consensus 74 TpLh~Aa~~g~~eiv~-lLL~~GAdin~~d-------------~~g~TpLh~A~~~~~~~~e~v~lLl~~G-adin~~~d 138 (446)
T PHA02946 74 YPLHIASKINNNRIVA-MLLTHGADPNACD-------------KQHKTPLYYLSGTDDEVIERINLLVQYG-AKINNSVD 138 (446)
T ss_pred CHHHHHHHcCCHHHHH-HHHHCcCCCCCCC-------------CCCCCHHHHHHHcCCchHHHHHHHHHcC-CCcccccC
Confidence 6777777777765554 4555899999887 89999999998766 478999999999 99986448
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccch
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLC 188 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~ 188 (705)
.+|.|||| |+..|+ .+++++|++.|++++.+|..|+||||+|+. ...++.+++++|+++|++++..+. .+
T Consensus 139 ~~g~tpL~-aa~~~~---~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~----~~~~~~~~v~~Ll~~Gadin~~d~--~G 208 (446)
T PHA02946 139 EEGCGPLL-ACTDPS---ERVFKKIMSIGFEARIVDKFGKNHIHRHLM----SDNPKASTISWMMKLGISPSKPDH--DG 208 (446)
T ss_pred CCCCcHHH-HHHCCC---hHHHHHHHhccccccccCCCCCCHHHHHHH----hcCCCHHHHHHHHHcCCCCcccCC--CC
Confidence 88999997 556677 899999999999999999999999999876 335567899999999999954443 22
Q ss_pred hhHHHHHHhhcC-CCCccchhcccc------ccccCCCcccccCC
Q 005270 189 DQVVYKMEEQEQ-PEISTPRVLKDG------AEKKEYPVDLTLPD 226 (705)
Q Consensus 189 ~~~~~~~l~~e~-~~~~~~~ll~~~------~~kke~Pldlalpd 226 (705)
. ++.++..... .......++..+ +..+.+|++++...
T Consensus 209 ~-TpLH~Aa~~~~~~~~iv~lLl~gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 209 N-TPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred C-CHHHHHHHcCCCcHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 3 3333333322 233333332222 44577777776653
No 26
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.67 E-value=2.9e-16 Score=150.85 Aligned_cols=124 Identities=27% Similarity=0.326 Sum_probs=111.2
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
+-...++.||..+.+..|+++|.+..-.||.+| .+|.||||.|+++|+.+||+.|+..| ++++.+
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD-------------~D~YTpLHRAaYn~h~div~~ll~~g-An~~a~- 126 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRD-------------EDEYTPLHRAAYNGHLDIVHELLLSG-ANKEAK- 126 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhccccccccc-------------cccccHHHHHHhcCchHHHHHHHHcc-CCcccc-
Confidence 344667888888999999999998877799998 99999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
...||||||-||.-.+ .+|+-+||.+|+|||+......||||+|+. ..+....+++||.
T Consensus 127 T~~GWTPLhSAckWnN---~~va~~LLqhgaDVnA~t~g~ltpLhlaa~-----~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 127 TNEGWTPLHSACKWNN---FEVAGRLLQHGADVNAQTKGLLTPLHLAAG-----NRNSRDTLELLLH 185 (228)
T ss_pred cccCccchhhhhcccc---hhHHHHHHhccCcccccccccchhhHHhhc-----ccchHHHHHHHhh
Confidence 9999999999999988 999999999999999999999999999986 1455666777764
No 27
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.66 E-value=4.7e-16 Score=183.50 Aligned_cols=131 Identities=23% Similarity=0.287 Sum_probs=119.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC-CHHHHHHHHHcCCCCcccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG-SKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G-~~~vVk~LL~~G~aDVn~~ 106 (705)
.+.++||.|+..++...+.++|.+.|++++..+ ..|+||||+|+..| ..+++++|+..| ++++..
T Consensus 272 ~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d-------------~~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adin~~ 337 (682)
T PHA02876 272 CKNTPLHHASQAPSLSRLVPKLLERGADVNAKN-------------IKGETPLYLMAKNGYDTENIRTLIMLG-ADVNAA 337 (682)
T ss_pred CCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcC-------------CCCCCHHHHHHHhCCCHHHHHHHHHcC-CCCCCc
Confidence 467899999999998888888888999999887 89999999999999 599999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+..|.||||+|+..+. ..+++++|++.|++++.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 338 -d~~g~TpLh~A~~~~~--~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~------~~~~~iv~~Ll~~gad~~~ 403 (682)
T PHA02876 338 -DRLYITPLHQASTLDR--NKDIVITLLELGANVNARDYCDKTPIHYAAV------RNNVVIINTLLDYGADIEA 403 (682)
T ss_pred -ccCCCcHHHHHHHhCC--cHHHHHHHHHcCCCCccCCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCccc
Confidence 9999999999998643 2899999999999999999999999999998 8999999999999999943
No 28
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.66 E-value=2.6e-16 Score=178.90 Aligned_cols=134 Identities=25% Similarity=0.305 Sum_probs=122.1
Q ss_pred hccCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHH-cCCCC
Q 005270 24 DGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK-SGHVD 102 (705)
Q Consensus 24 ~~~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~-~G~aD 102 (705)
+...+++++||+||..|+.+.+..+|. .|++|+.++ .++.||||.||.+|++++|+.||+ .+...
T Consensus 268 ~~d~dg~tpLH~a~r~G~~~svd~Ll~-~Ga~I~~kn-------------~d~~spLH~AA~yg~~ntv~rLL~~~~~rl 333 (929)
T KOG0510|consen 268 DEDNDGCTPLHYAARQGGPESVDNLLG-FGASINSKN-------------KDEESPLHFAAIYGRINTVERLLQESDTRL 333 (929)
T ss_pred cccccCCchHHHHHHcCChhHHHHHHH-cCCcccccC-------------CCCCCchHHHHHcccHHHHHHHHhCcCccc
Confidence 445678999999999999998876666 999999998 999999999999999999999999 56567
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCc---ccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVN---SVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin---~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
.|.. |..|.||||+|+..|| ..++++||+.||+.+ ..|.+|+||||+|+. .|+..+|++|+.+|+++
T Consensus 334 lne~-D~~g~tpLHlaa~~gH---~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~------~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 334 LNES-DLHGMTPLHLAAKSGH---DRVVQLLLNKGALFLNMSEADSDGNTALHLAAK------YGNTSAVQKLISHGADI 403 (929)
T ss_pred cccc-cccCCCchhhhhhcCH---HHHHHHHHhcChhhhcccccccCCchhhhHHHH------hccHHHHHHHHHcCCce
Confidence 7877 9999999999999999 999999999999987 569999999999999 99999999999999999
Q ss_pred Cc
Q 005270 180 CV 181 (705)
Q Consensus 180 ~~ 181 (705)
.+
T Consensus 404 ~~ 405 (929)
T KOG0510|consen 404 GV 405 (929)
T ss_pred ee
Confidence 44
No 29
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.65 E-value=7.3e-16 Score=180.97 Aligned_cols=133 Identities=15% Similarity=0.183 Sum_probs=95.3
Q ss_pred cchHHHHHHHHh--CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC--HHHHHHHHHcCCCCc
Q 005270 28 YNFSILLELTAS--DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS--KDVVSYVIKSGHVDV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~--gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~--~~vVk~LL~~G~aDV 103 (705)
++.++||.|+.. ++. .+.++|.+.|+++|..+ ..|.||||+|+..|+ .++|++||++| +|+
T Consensus 176 ~G~TpLH~A~~n~~~~~-eIVklLLe~GADVN~kD-------------~~G~TPLH~Aa~~g~~~~eIVklLLe~G-ADV 240 (764)
T PHA02716 176 TGYGILHAYLGNMYVDI-DILEWLCNNGVNVNLQN-------------NHLITPLHTYLITGNVCASVIKKIIELG-GDM 240 (764)
T ss_pred CCCcHHHHHHHhccCCH-HHHHHHHHcCCCCCCCC-------------CCCCCHHHHHHHcCCCCHHHHHHHHHcC-CCC
Confidence 345666654432 233 44455555788888876 788888888888885 47888888888 888
Q ss_pred ccccCCCCChHHHHHH-------------------------------------hCCCCChHHHHHHHHHCCCCCcccCCC
Q 005270 104 NRACGSDGVTALHCAA-------------------------------------SGGSANSVEVVKLLLDASADVNSVDAY 146 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa-------------------------------------~~G~~~~~eivklLL~~GAdin~~D~~ 146 (705)
|.+ +..|+||||+|+ ..|+ .+++++|++.|++++.+|.+
T Consensus 241 N~k-D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~---leiVklLLe~GAdIN~kD~~ 316 (764)
T PHA02716 241 DMK-CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNID---ISVVYSFLQPGVKLHYKDSA 316 (764)
T ss_pred CCC-CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCC---HHHHHHHHhCCCceeccCCC
Confidence 887 788888888653 2344 77888888888888888888
Q ss_pred CCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 147 GNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 147 G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+||||+|+. ...++.+++++|+++|++++..+
T Consensus 317 G~TPLH~Aaa----~~~~~~eIVklLLe~GADIN~kD 349 (764)
T PHA02716 317 GRTCLHQYIL----RHNISTDIIKLLHEYGNDLNEPD 349 (764)
T ss_pred CCCHHHHHHH----HhCCCchHHHHHHHcCCCCccCC
Confidence 8888888754 12456788888888888884433
No 30
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.65 E-value=6e-16 Score=174.35 Aligned_cols=170 Identities=20% Similarity=0.265 Sum_probs=128.6
Q ss_pred chHHHHHHH--HhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCcc
Q 005270 29 NFSILLELT--ASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG--SKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 29 ~~s~LL~aA--a~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G--~~~vVk~LL~~G~aDVn 104 (705)
+.++|+.|+ ..|+.+.++.++ +.|++++..+ ..|.||||+|+..| +.+++++|++.| ++++
T Consensus 106 g~tpL~~A~~~~~~~~~iv~~Ll-~~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~din 170 (480)
T PHA03100 106 GITPLLYAISKKSNSYSIVEYLL-DNGANVNIKN-------------SDGENLLHLYLESNKIDLKILKLLIDKG-VDIN 170 (480)
T ss_pred CCchhhHHHhcccChHHHHHHHH-HcCCCCCccC-------------CCCCcHHHHHHHcCCChHHHHHHHHHCC-CCcc
Confidence 456666666 555555444444 4777777776 89999999999999 999999999999 9999
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCC------CCHHHHHHhhCccCCCCh--HHHHHHHHhCC
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYG------NRPADLIAKNCNLGFNSR--KKVLQALLKGS 176 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G------~TPLh~Aa~~~~~~~~g~--~eivelLL~~G 176 (705)
.. +..|.||||+|+..|+ .+++++|+++|++++..+..| .||||+|+. .++ .+++++|+++|
T Consensus 171 ~~-d~~g~tpL~~A~~~~~---~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~------~~~~~~~iv~~Ll~~g 240 (480)
T PHA03100 171 AK-NRYGYTPLHIAVEKGN---IDVIKFLLDNGADINAGDIETLLFTIFETPLHIAAC------YNEITLEVVNYLLSYG 240 (480)
T ss_pred cc-cCCCCCHHHHHHHhCC---HHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHH------hCcCcHHHHHHHHHcC
Confidence 98 8899999999999999 999999999999999999999 899999998 777 99999999999
Q ss_pred CCCCccccccchhhHHHHHHhhcCCCCccchhccc------cccccCCCcccccCC
Q 005270 177 GTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKD------GAEKKEYPVDLTLPD 226 (705)
Q Consensus 177 adi~~~~~~~~~~~~~~~~l~~e~~~~~~~~ll~~------~~~kke~Pldlalpd 226 (705)
++++..+. .+.+++..++...+.+ ....|+.. .+..+.+|++.++..
T Consensus 241 ~din~~d~--~g~TpL~~A~~~~~~~-iv~~Ll~~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 241 VPINIKDV--YGFTPLHYAVYNNNPE-FVKYLLDLGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred CCCCCCCC--CCCCHHHHHHHcCCHH-HHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence 99965542 2233333332221111 11222222 255677888877653
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.65 E-value=6.9e-16 Score=173.29 Aligned_cols=127 Identities=30% Similarity=0.468 Sum_probs=112.6
Q ss_pred HHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC---CHHHHHHHHHcCCCCcccccCCC
Q 005270 34 LELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG---SKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 34 L~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G---~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
+.++..++++.++.+|. .|+++|..+ ..|.||||+|+..| +.+++++|++.| +|+|.+ +..
T Consensus 19 ~~~~~~~~~~~v~~Ll~-~ga~vn~~~-------------~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~G-adin~~-~~~ 82 (471)
T PHA03095 19 LLNASNVTVEEVRRLLA-AGADVNFRG-------------EYGKTPLHLYLHYSSEKVKDIVRLLLEAG-ADVNAP-ERC 82 (471)
T ss_pred HHcCCCCCHHHHHHHHH-cCCCcccCC-------------CCCCCHHHHHHHhcCCChHHHHHHHHHCC-CCCCCC-CCC
Confidence 45566677777766665 899999987 88999999999998 999999999999 999998 889
Q ss_pred CChHHHHHHhCC-CCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 111 GVTALHCAASGG-SANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 111 G~TpLH~Aa~~G-~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|.||||+|+..| . .+++++|+++|++++.+|..|.||||+|+. ...++.+++++|+++|++++..+
T Consensus 83 g~TpLh~A~~~~~~---~~iv~lLl~~ga~in~~~~~g~tpLh~a~~----~~~~~~~iv~~Ll~~gad~~~~d 149 (471)
T PHA03095 83 GFTPLHLYLYNATT---LDVIKLLIKAGADVNAKDKVGRTPLHVYLS----GFNINPKVIRLLLRKGADVNALD 149 (471)
T ss_pred CCCHHHHHHHcCCc---HHHHHHHHHcCCCCCCCCCCCCCHHHHHhh----CCcCCHHHHHHHHHcCCCCCccC
Confidence 999999999999 6 999999999999999999999999999984 23678899999999999995443
No 32
>PHA02798 ankyrin-like protein; Provisional
Probab=99.65 E-value=8.7e-16 Score=174.52 Aligned_cols=136 Identities=22% Similarity=0.316 Sum_probs=115.2
Q ss_pred cCcchHHHHHHHHh-CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHc-----CCHHHHHHHHHcC
Q 005270 26 LCYNFSILLELTAS-DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMF-----GSKDVVSYVIKSG 99 (705)
Q Consensus 26 ~~~~~s~LL~aAa~-gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~-----G~~~vVk~LL~~G 99 (705)
..++.+.+..+... +...++.++|.++|+++|..+ ..|.||||+|+.. +..+++++|+++|
T Consensus 33 ~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~G 99 (489)
T PHA02798 33 IVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLD-------------NEYSTPLCTILSNIKDYKHMLDIVKILIENG 99 (489)
T ss_pred hcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCC-------------CCCCChHHHHHHhHHhHHhHHHHHHHHHHCC
Confidence 34556655544444 335566777777999999997 8999999998864 6789999999999
Q ss_pred CCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCCh---HHHHHHHHhCC
Q 005270 100 HVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSR---KKVLQALLKGS 176 (705)
Q Consensus 100 ~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~---~eivelLL~~G 176 (705)
+|+|.. +.+|.||||+|+..+..+..+++++|+++|||++.+|..|.||||+|+. .++ .+++++|+++|
T Consensus 100 -adiN~~-d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~------~~~~~~~~vv~~Ll~~g 171 (489)
T PHA02798 100 -ADINKK-NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQ------SNHHIDIEIIKLLLEKG 171 (489)
T ss_pred -CCCCCC-CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHH------cCCcchHHHHHHHHHhC
Confidence 999998 9999999999999875555999999999999999999999999999998 454 89999999999
Q ss_pred CCCCcc
Q 005270 177 GTGCVE 182 (705)
Q Consensus 177 adi~~~ 182 (705)
++++..
T Consensus 172 adin~~ 177 (489)
T PHA02798 172 VDINTH 177 (489)
T ss_pred CCcccc
Confidence 999543
No 33
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.65 E-value=1.5e-15 Score=179.21 Aligned_cols=101 Identities=24% Similarity=0.323 Sum_probs=76.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
+..|+||||+|+..|+.+++++|++.| ++++.. +..|.||||+|+..+. ...++++|++.|+++|.+|..|+||||
T Consensus 372 d~~G~TpLh~Aa~~~~~~iv~~Ll~~g-ad~~~~-~~~g~T~Lh~A~~~~~--~~~~vk~Ll~~gadin~~d~~G~TpLh 447 (682)
T PHA02876 372 DYCDKTPIHYAAVRNNVVIINTLLDYG-ADIEAL-SQKIGTALHFALCGTN--PYMSVKTLIDRGANVNSKNKDLSTPLH 447 (682)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcccc-CCCCCchHHHHHHcCC--HHHHHHHHHhCCCCCCcCCCCCChHHH
Confidence 377788888888888888888888887 888776 7777788888876554 256678888888888888888888888
Q ss_pred HHHhhCccCCCC-hHHHHHHHHhCCCCCCccc
Q 005270 153 LIAKNCNLGFNS-RKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 153 ~Aa~~~~~~~~g-~~eivelLL~~Gadi~~~~ 183 (705)
+|+. .+ +.+++++|+++|++++..+
T Consensus 448 ~Aa~------~~~~~~iv~lLl~~Gad~n~~d 473 (682)
T PHA02876 448 YACK------KNCKLDVIEMLLDNGADVNAIN 473 (682)
T ss_pred HHHH------hCCcHHHHHHHHHCCCCCCCCC
Confidence 8876 33 5678888888888874443
No 34
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.64 E-value=1.3e-15 Score=173.23 Aligned_cols=170 Identities=16% Similarity=0.196 Sum_probs=108.2
Q ss_pred CCCCChHHHHHHHc---CCHHHHHHHHHcCCCCc-ccccCCCCChHHHHHHhC--CCCChHHHHHHHHHCCCCCcc-cCC
Q 005270 73 GFEERTPLMIASMF---GSKDVVSYVIKSGHVDV-NRACGSDGVTALHCAASG--GSANSVEVVKLLLDASADVNS-VDA 145 (705)
Q Consensus 73 ~~~G~TPLh~AA~~---G~~~vVk~LL~~G~aDV-n~~~d~~G~TpLH~Aa~~--G~~~~~eivklLL~~GAdin~-~D~ 145 (705)
+..|.||||.|+.. |+.++|++|+++| +|+ +.. +..|.||||+|+.. ++ .++|++|+++|+|++. .+.
T Consensus 105 d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G-adin~~~-d~~g~tpLh~a~~~~~~~---~~iv~~Ll~~Gadi~~~~~~ 179 (494)
T PHA02989 105 TFNGVSPIVCFIYNSNINNCDMLRFLLSKG-INVNDVK-NSRGYNLLHMYLESFSVK---KDVIKILLSFGVNLFEKTSL 179 (494)
T ss_pred CCCCCcHHHHHHHhcccCcHHHHHHHHHCC-CCccccc-CCCCCCHHHHHHHhccCC---HHHHHHHHHcCCCccccccc
Confidence 47788888877655 5788888888888 888 565 78888888887654 35 7888888888888887 577
Q ss_pred CCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhc----CCCCccch-h-----ccccccc
Q 005270 146 YGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQE----QPEISTPR-V-----LKDGAEK 215 (705)
Q Consensus 146 ~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e----~~~~~~~~-l-----l~~~~~k 215 (705)
.|.||||+|+. .....++.+++++|+++|++++..+. .+...+...+... ........ + +...+..
T Consensus 180 ~g~tpL~~a~~--~~~~~~~~~iv~~Ll~~Ga~vn~~~~--~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~ 255 (494)
T PHA02989 180 YGLTPMNIYLR--NDIDVISIKVIKYLIKKGVNIETNNN--GSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKK 255 (494)
T ss_pred cCCChHHHHHh--cccccccHHHHHHHHhCCCCccccCC--ccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCC
Confidence 88888888876 33334578888888888888854432 1111111111100 00010000 1 1223566
Q ss_pred cCCCcccccCCCcCC------ccccccccccccccccCcccc
Q 005270 216 KEYPVDLTLPDIKNG------IYGTDEFRMYTFKVKPCSRAY 251 (705)
Q Consensus 216 ke~Pldlalpd~~~~------~y~sdefrm~sfKv~PCsra~ 251 (705)
+.+|++.+....+.. ..|+|.......+.+|...+.
T Consensus 256 G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~ 297 (494)
T PHA02989 256 GFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAI 297 (494)
T ss_pred CCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 889988887543331 456666666666766665444
No 35
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.63 E-value=1.8e-15 Score=177.71 Aligned_cols=139 Identities=22% Similarity=0.203 Sum_probs=115.2
Q ss_pred CcchHHHHHHHHhCCH-HHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHH----------------------
Q 005270 27 CYNFSILLELTASDDL-DGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIA---------------------- 83 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~-~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~A---------------------- 83 (705)
.++.++||.|+..|+. .++.++|++.|+++|.++ ..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD-------------~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n 276 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKIIELGGDMDMKC-------------VNGMSPIMTYIINIDNINPEITNIYIESLDGN 276 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCC-------------CCCCCHHHHHHHhhhccCHHHHHHHHHhcccc
Confidence 3567888888888864 466777777999999998 8899999975
Q ss_pred ---------------HHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHh--CCCCChHHHHHHHHHCCCCCcccCCC
Q 005270 84 ---------------SMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAAS--GGSANSVEVVKLLLDASADVNSVDAY 146 (705)
Q Consensus 84 ---------------A~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~--~G~~~~~eivklLL~~GAdin~~D~~ 146 (705)
+..|+.++|++|++.| +++|.+ +..|+||||+|+. .++ .+++++|++.|++++.+|..
T Consensus 277 ~~~~~~~~L~~~i~AA~~g~leiVklLLe~G-AdIN~k-D~~G~TPLH~Aaa~~~~~---~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 277 KVKNIPMILHSYITLARNIDISVVYSFLQPG-VKLHYK-DSAGRTCLHQYILRHNIS---TDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred ccccchhhhHHHHHHHHcCCHHHHHHHHhCC-Cceecc-CCCCCCHHHHHHHHhCCC---chHHHHHHHcCCCCccCCCC
Confidence 4458899999999999 999998 9999999999865 456 89999999999999999999
Q ss_pred CCCHHHHHHhhCc--------cCCCChHHHHHHHHhCCCCCCccc
Q 005270 147 GNRPADLIAKNCN--------LGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 147 G~TPLh~Aa~~~~--------~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+||||+|+.... ....++.+++++|+++|++++..+
T Consensus 352 G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn 396 (764)
T PHA02716 352 GNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVN 396 (764)
T ss_pred CCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcC
Confidence 9999999864100 012468999999999999995444
No 36
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.63 E-value=2e-15 Score=171.72 Aligned_cols=136 Identities=23% Similarity=0.298 Sum_probs=114.0
Q ss_pred cCcchHHHHHHHHhCC-HHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcC------CHHHHHHHHHc
Q 005270 26 LCYNFSILLELTASDD-LDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFG------SKDVVSYVIKS 98 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd-~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G------~~~vVk~LL~~ 98 (705)
...+.++|+++++.++ ..++.++|.+.|+++|..+ .+.||||.|+..+ +.++|++||++
T Consensus 32 ~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~--------------~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~ 97 (494)
T PHA02989 32 EYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG--------------YIETPLCAVLRNREITSNKIKKIVKLLLKF 97 (494)
T ss_pred ccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC--------------CCCCcHHHHHhccCcchhhHHHHHHHHHHC
Confidence 3456788877776654 5667777788999999875 4689999998754 47899999999
Q ss_pred CCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCC
Q 005270 99 GHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADV-NSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 99 G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdi-n~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Ga 177 (705)
| +|+|.+ +..|.||||+|+..+..+..+++++|+++|||+ +..|..|+||||+|+. ...++.+++++|+++|+
T Consensus 98 G-adin~~-d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~----~~~~~~~iv~~Ll~~Ga 171 (494)
T PHA02989 98 G-ADINLK-TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLE----SFSVKKDVIKILLSFGV 171 (494)
T ss_pred C-CCCCCC-CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHH----hccCCHHHHHHHHHcCC
Confidence 9 999998 999999999998775444499999999999999 8999999999999976 23568999999999999
Q ss_pred CCCc
Q 005270 178 TGCV 181 (705)
Q Consensus 178 di~~ 181 (705)
+++.
T Consensus 172 di~~ 175 (494)
T PHA02989 172 NLFE 175 (494)
T ss_pred Cccc
Confidence 9944
No 37
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=4e-15 Score=129.47 Aligned_cols=87 Identities=37% Similarity=0.589 Sum_probs=80.8
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCc
Q 005270 80 LMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCN 159 (705)
Q Consensus 80 Lh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~ 159 (705)
||+||..|+++++++|++.+ .+++. |.||||+|+..|+ .+++++|++.|++++.+|.+|+||||+|+.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~-~~~~~-----~~~~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~--- 68 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG-ADINL-----GNTALHYAAENGN---LEIVKLLLENGADINSQDKNGNTALHYAAE--- 68 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT-STTTS-----SSBHHHHHHHTTT---HHHHHHHHHTTTCTT-BSTTSSBHHHHHHH---
T ss_pred CHHHHHcCCHHHHHHHHHCc-CCCCC-----CCCHHHHHHHcCC---HHHHHHHHHhcccccccCCCCCCHHHHHHH---
Confidence 79999999999999999988 87765 8899999999999 999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHhCCCCCCc
Q 005270 160 LGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 160 ~~~~g~~eivelLL~~Gadi~~ 181 (705)
.++.+++++|+++|++++.
T Consensus 69 ---~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 69 ---NGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp ---TTHHHHHHHHHHTTT-TTS
T ss_pred ---cCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999944
No 38
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.61 E-value=1.1e-15 Score=151.51 Aligned_cols=113 Identities=27% Similarity=0.324 Sum_probs=101.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
|++|.|||++|+.+|++.+|++||+.| +|++.. ++...++|.+|+.+|. .+||++||.++.|+|..|.+|-|||-
T Consensus 157 De~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~~l-gk~resALsLAt~ggy---tdiV~lLL~r~vdVNvyDwNGgTpLl 231 (296)
T KOG0502|consen 157 DEFGFTPLIWAAAKGHIPVVQFLLNSG-ADPDAL-GKYRESALSLATRGGY---TDIVELLLTREVDVNVYDWNGGTPLL 231 (296)
T ss_pred cccCchHhHHHHhcCchHHHHHHHHcC-CChhhh-hhhhhhhHhHHhcCCh---HHHHHHHHhcCCCcceeccCCCceee
Confidence 499999999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhh
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQ 198 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~ 198 (705)
+|++ .++.+|++.||..||++++. +..+.+..+.....
T Consensus 232 yAvr------gnhvkcve~Ll~sGAd~t~e--~dsGy~~mdlAVal 269 (296)
T KOG0502|consen 232 YAVR------GNHVKCVESLLNSGADVTQE--DDSGYWIMDLAVAL 269 (296)
T ss_pred eeec------CChHHHHHHHHhcCCCcccc--cccCCcHHHHHHHh
Confidence 9998 89999999999999999443 34445555554443
No 39
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.61 E-value=8.9e-16 Score=165.79 Aligned_cols=122 Identities=32% Similarity=0.429 Sum_probs=110.7
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.+||..|+..|+++.+++++ ++|+|++..+ ..|.|.||+||+.|+.+|++||++.| +|+|.+
T Consensus 115 ~TNStPLraACfDG~leivKyLv-E~gad~~Ian-------------rhGhTcLmIa~ykGh~~I~qyLle~g-ADvn~k 179 (615)
T KOG0508|consen 115 RTNSTPLRAACFDGHLEIVKYLV-EHGADPEIAN-------------RHGHTCLMIACYKGHVDIAQYLLEQG-ADVNAK 179 (615)
T ss_pred ccCCccHHHHHhcchhHHHHHHH-HcCCCCcccc-------------cCCCeeEEeeeccCchHHHHHHHHhC-CCcchh
Confidence 34557777777778887777777 5999999998 99999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
+..|+|+||.|+..|+ ++++++||++|+.+.. |..|.|||..|+. .|+.++|++|+.
T Consensus 180 -s~kGNTALH~caEsG~---vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~------tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 180 -SYKGNTALHDCAESGS---VDIVQLLLKHGAKIDV-DGHGMTPLLLAAV------TGHTDIVERLLQ 236 (615)
T ss_pred -cccCchHHHhhhhccc---HHHHHHHHhCCceeee-cCCCCchHHHHhh------hcchHHHHHHhc
Confidence 9999999999999999 9999999999998864 6679999999988 899999999996
No 40
>PHA02798 ankyrin-like protein; Provisional
Probab=99.61 E-value=8.3e-15 Score=166.53 Aligned_cols=103 Identities=20% Similarity=0.303 Sum_probs=65.7
Q ss_pred CCCChHHHHHHHcCC---HHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCC-CChHHHHHHHHHCCCC----------
Q 005270 74 FEERTPLMIASMFGS---KDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGS-ANSVEVVKLLLDASAD---------- 139 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~---~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~-~~~~eivklLL~~GAd---------- 139 (705)
..|.||||+|+..|+ .+++++|++.| +|+|...+..|.||||+++..+. ....+++++|+++|++
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g-adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~ 221 (489)
T PHA02798 143 KDGFTMLQVYLQSNHHIDIEIIKLLLEKG-VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKK 221 (489)
T ss_pred CCCCcHHHHHHHcCCcchHHHHHHHHHhC-CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccc
Confidence 566666666666665 66666666666 66665533456666666654320 0115666666666543
Q ss_pred -----------------------------CcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 140 -----------------------------VNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 140 -----------------------------in~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+|.+|..|.||||+|+. .++.+++++||++||+++..+
T Consensus 222 ~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~------~~~~~~v~~LL~~GAdin~~d 288 (489)
T PHA02798 222 KFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVS------HNNRKIFEYLLQLGGDINIIT 288 (489)
T ss_pred hHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHH------cCcHHHHHHHHHcCCcccccC
Confidence 34456678888888887 778888888888888884443
No 41
>PHA02795 ankyrin-like protein; Provisional
Probab=99.60 E-value=8.2e-15 Score=162.45 Aligned_cols=146 Identities=19% Similarity=0.136 Sum_probs=108.6
Q ss_pred chHHHHHHHHh-CCHHHHHHHHHhcCCCCcccCcc--------------------ccccc-cCccC---CCCCChHHHHH
Q 005270 29 NFSILLELTAS-DDLDGFRKAIEEDGHDIDESGLW--------------------YGRII-GSRKM---GFEERTPLMIA 83 (705)
Q Consensus 29 ~~s~LL~aAa~-gd~~~v~~lL~e~Gadvn~~dlw--------------------yg~~~-~s~~~---~~~G~TPLh~A 83 (705)
..++||.++.. ++..++.++|.++|++++..+.. .|... ..... +..+.|++|.|
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a 195 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLV 195 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHH
Confidence 44666666661 34444455555689988765410 11100 00000 13477889999
Q ss_pred HHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCc--cC
Q 005270 84 SMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCN--LG 161 (705)
Q Consensus 84 A~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~--~~ 161 (705)
+..++.+++++|+++| +|+|.+ +..|.||||+|+..|+ .+++++|+++||+++.+|..|.||||+|+..+. ..
T Consensus 196 ~~~~~~eIve~LIs~G-ADIN~k-D~~G~TpLh~Aa~~g~---~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~ 270 (437)
T PHA02795 196 DEPTVLEIYKLCIPYI-EDINQL-DAGGRTLLYRAIYAGY---IDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIAR 270 (437)
T ss_pred HhcCHHHHHHHHHhCc-CCcCcC-CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccc
Confidence 9999999999999999 999998 9999999999999999 999999999999999999999999999997221 01
Q ss_pred CCChHHHHHHHHhCCCCC
Q 005270 162 FNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 162 ~~g~~eivelLL~~Gadi 179 (705)
..++.+++++|+++|+++
T Consensus 271 ~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 271 RETHLKILEILLREPLSI 288 (437)
T ss_pred cccHHHHHHHHHhCCCCC
Confidence 123679999999999988
No 42
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.58 E-value=1.1e-15 Score=156.40 Aligned_cols=123 Identities=24% Similarity=0.319 Sum_probs=114.3
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCC
Q 005270 33 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGV 112 (705)
Q Consensus 33 LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~ 112 (705)
++..+.+|+...++..|.+...|.|.-| ..|.+|||+||..|+..+|+.||..| +.||.. +....
T Consensus 4 if~wcregna~qvrlwld~tehdln~gd-------------dhgfsplhwaakegh~aivemll~rg-arvn~t-nmgdd 68 (448)
T KOG0195|consen 4 IFGWCREGNAFQVRLWLDDTEHDLNVGD-------------DHGFSPLHWAAKEGHVAIVEMLLSRG-ARVNST-NMGDD 68 (448)
T ss_pred hhhhhhcCCeEEEEEEecCccccccccc-------------ccCcchhhhhhhcccHHHHHHHHhcc-cccccc-cCCCC
Confidence 5677888888888888887788888876 89999999999999999999999999 999998 88889
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 113 TALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 113 TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
||||+|+..|+ -++|+.||+..+|+|+++..|+||||||+- .|...|.+-|+..||.+
T Consensus 69 tplhlaaahgh---rdivqkll~~kadvnavnehgntplhyacf------wgydqiaedli~~ga~v 126 (448)
T KOG0195|consen 69 TPLHLAAAHGH---RDIVQKLLSRKADVNAVNEHGNTPLHYACF------WGYDQIAEDLISCGAAV 126 (448)
T ss_pred cchhhhhhccc---HHHHHHHHHHhcccchhhccCCCchhhhhh------hcHHHHHHHHHhcccee
Confidence 99999999999 999999999999999999999999999976 99999999999999998
No 43
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=8.3e-15 Score=166.86 Aligned_cols=139 Identities=23% Similarity=0.276 Sum_probs=114.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCccc--CccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDES--GLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~--dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
+.++||.|+..||.+.++.+|. .|..+... |..-.++.-.+..|.+|.||||+||..|+++.|+.|+..| ++++.+
T Consensus 225 ~~~pLhlAve~g~~e~lk~~L~-n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~G-a~I~~k 302 (929)
T KOG0510|consen 225 KATPLHLAVEGGDIEMLKMCLQ-NGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFG-ASINSK 302 (929)
T ss_pred CCcchhhhhhcCCHHHHHHHHh-CccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcC-Cccccc
Confidence 3477777777788888887776 44433222 1001122223445899999999999999999999999999 999999
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHH-CC-CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLD-AS-ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~-~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+.++.||||.||.+|+ +.+|+.||+ .| ..+|..|..|+||||+|++ .|+.+++++||++||..
T Consensus 303 -n~d~~spLH~AA~yg~---~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~------~gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 303 -NKDEESPLHFAAIYGR---INTVERLLQESDTRLLNESDLHGMTPLHLAAK------SGHDRVVQLLLNKGALF 367 (929)
T ss_pred -CCCCCCchHHHHHccc---HHHHHHHHhCcCccccccccccCCCchhhhhh------cCHHHHHHHHHhcChhh
Confidence 8999999999999999 999999998 44 5688999999999999998 99999999999999998
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.55 E-value=4.1e-14 Score=156.96 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=70.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC-----CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCC
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG-----SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNR 149 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d-----~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~T 149 (705)
++.||||+|+..|+.+++++|+++| ++.+...+ ..+.|++|.|+..++ .+++++|+++|||+|.+|..|.|
T Consensus 148 ~~~t~lh~A~~~~~~eIVk~Lls~G-a~~~n~~~~~l~~~~~~t~l~~a~~~~~---~eIve~LIs~GADIN~kD~~G~T 223 (437)
T PHA02795 148 ECLNAYFRGICKKESSVVEFILNCG-IPDENDVKLDLYKIIQYTRGFLVDEPTV---LEIYKLCIPYIEDINQLDAGGRT 223 (437)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcC-CcccccccchhhhhhccchhHHHHhcCH---HHHHHHHHhCcCCcCcCCCCCCC
Confidence 3355666666666666666666665 43221101 235566666666665 78999999999999999999999
Q ss_pred HHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 150 PADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 150 PLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|||+|+. .++.+++++|+++|++++..+
T Consensus 224 pLh~Aa~------~g~~eiVelLL~~GAdIN~~d 251 (437)
T PHA02795 224 LLYRAIY------AGYIDLVSWLLENGANVNAVM 251 (437)
T ss_pred HHHHHHH------cCCHHHHHHHHHCCCCCCCcC
Confidence 9999988 899999999999999995544
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.55 E-value=9.2e-15 Score=145.13 Aligned_cols=125 Identities=26% Similarity=0.341 Sum_probs=112.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.++++|++||+.|.+..++.+|. .|+|++... ++..++|++|+..|.+++|++||..+ +|||..
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~-~GAdp~~lg-------------k~resALsLAt~ggytdiV~lLL~r~-vdVNvy- 222 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLN-SGADPDALG-------------KYRESALSLATRGGYTDIVELLLTRE-VDVNVY- 222 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHH-cCCChhhhh-------------hhhhhhHhHHhcCChHHHHHHHHhcC-CCccee-
Confidence 36799999999999987765555 999999987 88899999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gad 178 (705)
|.+|-|||-||+.+++ ++|++.||+.|||++..|..|++++++|+. .|.. +|+..+++-+.
T Consensus 223 DwNGgTpLlyAvrgnh---vkcve~Ll~sGAd~t~e~dsGy~~mdlAVa------lGyr-~Vqqvie~h~l 283 (296)
T KOG0502|consen 223 DWNGGTPLLYAVRGNH---VKCVESLLNSGADVTQEDDSGYWIMDLAVA------LGYR-IVQQVIEKHAL 283 (296)
T ss_pred ccCCCceeeeeecCCh---HHHHHHHHhcCCCcccccccCCcHHHHHHH------hhhH-HHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999998 5665 77776665443
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.55 E-value=9.5e-15 Score=153.90 Aligned_cols=135 Identities=29% Similarity=0.366 Sum_probs=114.6
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHc-----CCHHHHHHHHHcCCCC
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMF-----GSKDVVSYVIKSGHVD 102 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~-----G~~~vVk~LL~~G~aD 102 (705)
++.+.||+++...|++.|..+|...-++||..+ .-|.||+|+|+.. .++.+|..|...| |
T Consensus 267 NGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qN-------------rAGYtpiMLaALA~lk~~~d~~vV~~LF~mg--n 331 (452)
T KOG0514|consen 267 NGNTALHYAVSHANFDVVSILLDSGVCDVDQQN-------------RAGYTPVMLAALAKLKQPADRTVVERLFKMG--D 331 (452)
T ss_pred CCCeeeeeeecccchHHHHHHhccCcccccccc-------------cccccHHHHHHHHhhcchhhHHHHHHHHhcc--C
Confidence 345777777788888888888876667888887 8999999999864 4678999998887 8
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC-CCCCCc
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG-SGTGCV 181 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~-Gadi~~ 181 (705)
||.+....|.|+|++|+..|+ +++|+.||..|||||++|.+|-|+|++|+. .||++|+++||.. +.|+..
T Consensus 332 VNaKAsQ~gQTALMLAVSHGr---~d~vk~LLacgAdVNiQDdDGSTALMCA~E------HGhkEivklLLA~p~cd~sL 402 (452)
T KOG0514|consen 332 VNAKASQHGQTALMLAVSHGR---VDMVKALLACGADVNIQDDDGSTALMCAAE------HGHKEIVKLLLAVPSCDISL 402 (452)
T ss_pred cchhhhhhcchhhhhhhhcCc---HHHHHHHHHccCCCccccCCccHHHhhhhh------hChHHHHHHHhccCccccee
Confidence 888767889999999999999 999999999999999999999999999998 9999999999975 566655
Q ss_pred ccccc
Q 005270 182 EEIDN 186 (705)
Q Consensus 182 ~~~~~ 186 (705)
.+.|.
T Consensus 403 tD~Dg 407 (452)
T KOG0514|consen 403 TDVDG 407 (452)
T ss_pred ecCCC
Confidence 55554
No 47
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.54 E-value=1.3e-14 Score=173.86 Aligned_cols=126 Identities=28% Similarity=0.378 Sum_probs=109.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
..+.++.++..+....++.+++ .|++++.++ ..|.||||+|+.+|++++|++||++| +|++.+ +
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~-~ga~v~~~~-------------~r~~TpLh~A~~~g~v~~VkfLLe~g-Adv~ak-~ 570 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLE-HGANVDLRT-------------GRGYTPLHVAVHYGNVDLVKFLLEHG-ADVNAK-D 570 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhh-cCCceehhc-------------ccccchHHHHHhcCCchHHHHhhhCC-cccccc-C
Confidence 3455555555555555555444 777777776 88999999999999999999999999 999998 8
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+.|+||||.||..|+ .+|+.+|+++||++|..|.+|.|||++|+. .++.+++++|+..+++.
T Consensus 571 ~~G~TPLH~Aa~~G~---~~i~~LLlk~GA~vna~d~~g~TpL~iA~~------lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 571 KLGYTPLHQAAQQGH---NDIAELLLKHGASVNAADLDGFTPLHIAVR------LGYLSVVKLLKVVTATP 632 (1143)
T ss_pred CCCCChhhHHHHcCh---HHHHHHHHHcCCCCCcccccCcchhHHHHH------hcccchhhHHHhccCcc
Confidence 999999999999999 999999999999999999999999999998 89999999999999883
No 48
>PHA02741 hypothetical protein; Provisional
Probab=99.54 E-value=3.4e-14 Score=139.22 Aligned_cols=100 Identities=19% Similarity=0.213 Sum_probs=88.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCChHHHHHHhCCCCCh-HHHHHHHHHCCCCCcccCC-
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIK------SGHVDVNRACGSDGVTALHCAASGGSANS-VEVVKLLLDASADVNSVDA- 145 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~------~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~-~eivklLL~~GAdin~~D~- 145 (705)
..|.|+||+|+..|+.++|++|+. .| ++++.+ +..|.||||+|+..|+... .+++++|++.|++++.+|.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~g-a~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHA-AALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhh-hhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 789999999999999999999854 35 889988 8999999999999987211 3889999999999999985
Q ss_pred CCCCHHHHHHhhCccCCCChHHHHHHHHh-CCCCCCc
Q 005270 146 YGNRPADLIAKNCNLGFNSRKKVLQALLK-GSGTGCV 181 (705)
Q Consensus 146 ~G~TPLh~Aa~~~~~~~~g~~eivelLL~-~Gadi~~ 181 (705)
+|+||||+|+. .++.+++++||. .|++++.
T Consensus 97 ~g~TpLh~A~~------~~~~~iv~~Ll~~~g~~~~~ 127 (169)
T PHA02741 97 EGDTALHLAAH------RRDHDLAEWLCCQPGIDLHF 127 (169)
T ss_pred CCCCHHHHHHH------cCCHHHHHHHHhCCCCCCCc
Confidence 99999999998 899999999997 5888843
No 49
>PHA02917 ankyrin-like protein; Provisional
Probab=99.53 E-value=4.3e-14 Score=165.87 Aligned_cols=123 Identities=20% Similarity=0.160 Sum_probs=98.9
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHH--HcCCHHHHHHHHHcCCCCcccccCC
Q 005270 32 ILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIAS--MFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 32 ~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA--~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
+++++|+.++..++.++|.+.|+++|..+ ..|+||||+|+ ..|+.++|++||++| +|+|.. +.
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d-------------~~g~T~L~~~~a~~~~~~eivklLi~~G-a~vn~~-d~ 169 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKC-------------ENHRSVIENYVMTDDPVPEIIDLFIENG-CSVLYE-DE 169 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccC-------------CCCccHHHHHHHccCCCHHHHHHHHHcC-CCcccc-cc
Confidence 44555555544455555566889988887 89999999654 578999999999999 999864 32
Q ss_pred ---CC-----------ChHHHHHHh-----------CCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCC
Q 005270 110 ---DG-----------VTALHCAAS-----------GGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNS 164 (705)
Q Consensus 110 ---~G-----------~TpLH~Aa~-----------~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g 164 (705)
.| .||||+|+. +++ .++|++|+++|||+|.+|.+|.||||+|+. .+
T Consensus 170 ~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~---~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~------~g 240 (661)
T PHA02917 170 DDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR---PEVVKCLINHGIKPSSIDKNYCTALQYYIK------SS 240 (661)
T ss_pred ccccccccccccccccccHHHHHHhhcccccccccccCc---HHHHHHHHHCCCCcccCCCCCCcHHHHHHH------cC
Confidence 34 599999986 346 899999999999999999999999999998 56
Q ss_pred h--HHHHHHHHhCCCCC
Q 005270 165 R--KKVLQALLKGSGTG 179 (705)
Q Consensus 165 ~--~eivelLL~~Gadi 179 (705)
+ .++|++|++ |+++
T Consensus 241 ~~~~eivk~Li~-g~d~ 256 (661)
T PHA02917 241 HIDIDIVKLLMK-GIDN 256 (661)
T ss_pred CCcHHHHHHHHh-CCcc
Confidence 5 489999985 8776
No 50
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.53 E-value=2.6e-14 Score=146.51 Aligned_cols=134 Identities=22% Similarity=0.278 Sum_probs=112.5
Q ss_pred hhhhccCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q 005270 21 QKQDGLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGH 100 (705)
Q Consensus 21 ~~~~~~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~ 100 (705)
+...+.+++|++||.+|..|....+ +.|+..|+.||..+ ...-||||+||.+|+.++|+.||++.
T Consensus 26 dln~gddhgfsplhwaakegh~aiv-emll~rgarvn~tn-------------mgddtplhlaaahghrdivqkll~~k- 90 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIV-EMLLSRGARVNSTN-------------MGDDTPLHLAAAHGHRDIVQKLLSRK- 90 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHH-HHHHhccccccccc-------------CCCCcchhhhhhcccHHHHHHHHHHh-
Confidence 3445677889998888877776555 55555999999987 66789999999999999999999998
Q ss_pred CCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 101 VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 101 aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+|||.. +..|+|||||||.-|. ..+.+-|+..||.+++.+++|.|||+.|-. .-...+.++--++|..+
T Consensus 91 advnav-nehgntplhyacfwgy---dqiaedli~~ga~v~icnk~g~tpldkakp------~l~~~l~e~aek~gq~~ 159 (448)
T KOG0195|consen 91 ADVNAV-NEHGNTPLHYACFWGY---DQIAEDLISCGAAVNICNKKGMTPLDKAKP------MLKNTLLEIAEKHGQSP 159 (448)
T ss_pred cccchh-hccCCCchhhhhhhcH---HHHHHHHHhccceeeecccCCCCchhhhch------HHHHHHHHHHHHhCCCC
Confidence 999999 9999999999999999 899999999999999999999999999854 33334445555667776
No 51
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.52 E-value=2.8e-14 Score=157.05 Aligned_cols=128 Identities=28% Similarity=0.378 Sum_probs=112.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc-
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA- 106 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~- 106 (705)
++++.||.++...+.+.|+.+++ +|++||..+ .+|+||||.|+..|++.++++||..| +++-..
T Consensus 72 DglTalhq~~id~~~e~v~~l~e-~ga~Vn~~d-------------~e~wtPlhaaascg~~~i~~~li~~g-A~~~avN 136 (527)
T KOG0505|consen 72 DGLTALHQACIDDNLEMVKFLVE-NGANVNAQD-------------NEGWTPLHAAASCGYLNIVEYLIQHG-ANLLAVN 136 (527)
T ss_pred ccchhHHHHHhcccHHHHHHHHH-hcCCccccc-------------cccCCcchhhcccccHHHHHHHHHhh-hhhhhcc
Confidence 56788888888888777766655 999999998 99999999999999999999999988 442110
Q ss_pred ---------------------------------------------------------cCCCCChHHHHHHhCCCCChHHH
Q 005270 107 ---------------------------------------------------------CGSDGVTALHCAASGGSANSVEV 129 (705)
Q Consensus 107 ---------------------------------------------------------~d~~G~TpLH~Aa~~G~~~~~ei 129 (705)
.+..|.|+||.|+..|. .++
T Consensus 137 sdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy---~e~ 213 (527)
T KOG0505|consen 137 SDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGY---TEV 213 (527)
T ss_pred CCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhH---HHH
Confidence 13448999999999999 999
Q ss_pred HHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 130 VKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 130 vklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+++||++|.+++.+|.+||||||.|+. .+..+++++|+++|++.
T Consensus 214 ~~lLl~ag~~~~~~D~dgWtPlHAAA~------Wg~~~~~elL~~~ga~~ 257 (527)
T KOG0505|consen 214 AALLLQAGYSVNIKDYDGWTPLHAAAH------WGQEDACELLVEHGADM 257 (527)
T ss_pred HHHHHHhccCcccccccCCCcccHHHH------hhhHhHHHHHHHhhccc
Confidence 999999999999999999999999987 99999999999999999
No 52
>PHA02917 ankyrin-like protein; Provisional
Probab=99.52 E-value=8.9e-14 Score=163.23 Aligned_cols=131 Identities=9% Similarity=0.071 Sum_probs=103.9
Q ss_pred cchHHHHHHHHh---CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHH----HHHHHHHcCC
Q 005270 28 YNFSILLELTAS---DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKD----VVSYVIKSGH 100 (705)
Q Consensus 28 ~~~s~LL~aAa~---gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~----vVk~LL~~G~ 100 (705)
++.++||.||.. |+.+.+ ++|++.|++++..+ ..|+||||+|+..|+.+ +++.|++.+
T Consensus 31 ~g~t~Lh~a~~~~~~~~~~~v-~~Ll~~ga~v~~~~-------------~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~- 95 (661)
T PHA02917 31 FKNNALHAYLFNEHCNNVEVV-KLLLDSGTNPLHKN-------------WRQLTPLEEYTNSRHVKVNKDIAMALLEAT- 95 (661)
T ss_pred CCCcHHHHHHHhhhcCcHHHH-HHHHHCCCCccccC-------------CCCCCHHHHHHHcCChhHHHHHHHHHHhcc-
Confidence 456888876443 555555 55555999999887 89999999999999955 557888775
Q ss_pred CCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 101 VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 101 aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
.++|.. + ..+++|+|+.+|+ .++|++|+++|+|+|.+|.+|.||||+++. ...++.+++++|+++|++++
T Consensus 96 ~~~n~~-~--~~~~~~~a~~~~~---~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a----~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 96 GYSNIN-D--FNIFSYMKSKNVD---VDLIKVLVEHGFDLSVKCENHRSVIENYVM----TDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred CCCCCC-C--cchHHHHHhhcCC---HHHHHHHHHcCCCCCccCCCCccHHHHHHH----ccCCCHHHHHHHHHcCCCcc
Confidence 334443 2 3477888999999 999999999999999999999999997653 23789999999999999996
Q ss_pred ccc
Q 005270 181 VEE 183 (705)
Q Consensus 181 ~~~ 183 (705)
..+
T Consensus 166 ~~d 168 (661)
T PHA02917 166 YED 168 (661)
T ss_pred ccc
Confidence 543
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.50 E-value=6.3e-14 Score=147.79 Aligned_cols=123 Identities=27% Similarity=0.401 Sum_probs=106.6
Q ss_pred cchHHHHHHHHh-----CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 005270 28 YNFSILLELTAS-----DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD 102 (705)
Q Consensus 28 ~~~s~LL~aAa~-----gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD 102 (705)
-++++++.+|.. .|...|.+|+. -.|||.+. ...|+|+||+|+.+|++++|+.||..| +|
T Consensus 301 AGYtpiMLaALA~lk~~~d~~vV~~LF~--mgnVNaKA------------sQ~gQTALMLAVSHGr~d~vk~LLacg-Ad 365 (452)
T KOG0514|consen 301 AGYTPVMLAALAKLKQPADRTVVERLFK--MGDVNAKA------------SQHGQTALMLAVSHGRVDMVKALLACG-AD 365 (452)
T ss_pred ccccHHHHHHHHhhcchhhHHHHHHHHh--ccCcchhh------------hhhcchhhhhhhhcCcHHHHHHHHHcc-CC
Confidence 467888776643 34445555543 56788876 468999999999999999999999999 99
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDA-SADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~-GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
||.. |.+|.|+|+|||..|| .||+++||.. ++|+...|.+|-|+|.+|.. .|+.+|.-+|..+
T Consensus 366 VNiQ-DdDGSTALMCA~EHGh---kEivklLLA~p~cd~sLtD~DgSTAl~IAle------agh~eIa~mlYa~ 429 (452)
T KOG0514|consen 366 VNIQ-DDDGSTALMCAAEHGH---KEIVKLLLAVPSCDISLTDVDGSTALSIALE------AGHREIAVMLYAH 429 (452)
T ss_pred Cccc-cCCccHHHhhhhhhCh---HHHHHHHhccCcccceeecCCCchhhhhHHh------cCchHHHHHHHHH
Confidence 9999 9999999999999999 9999999976 89999999999999999998 8999999888764
No 54
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.49 E-value=1.2e-13 Score=135.34 Aligned_cols=102 Identities=20% Similarity=0.223 Sum_probs=89.7
Q ss_pred CCCCChHHHHHHHcCCH----HHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCC
Q 005270 73 GFEERTPLMIASMFGSK----DVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYG 147 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~----~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G 147 (705)
+.++.++||+||..|++ +++++|++.+ ++++.. +..|+||||+|+..|+.+.++++++|++.|+++|.+| ..|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g-~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g 94 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDG-HLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTG 94 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc-hhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCC
Confidence 47889999999999998 6667788888 999987 8999999999999998544566899999999999998 589
Q ss_pred CCHHHHHHhhCccCCCChHHHHHHHHh-CCCCCCcc
Q 005270 148 NRPADLIAKNCNLGFNSRKKVLQALLK-GSGTGCVE 182 (705)
Q Consensus 148 ~TPLh~Aa~~~~~~~~g~~eivelLL~-~Gadi~~~ 182 (705)
.||||+|+. .++.+++++|+. .|++++..
T Consensus 95 ~TpLh~A~~------~g~~~iv~~Ll~~~gad~~~~ 124 (166)
T PHA02743 95 NTLLHIAAS------TKNYELAEWLCRQLGVNLGAI 124 (166)
T ss_pred CcHHHHHHH------hCCHHHHHHHHhccCCCccCc
Confidence 999999998 899999999995 79998443
No 55
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.49 E-value=2.1e-13 Score=118.67 Aligned_cols=89 Identities=36% Similarity=0.537 Sum_probs=78.4
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCC
Q 005270 33 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGV 112 (705)
Q Consensus 33 LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~ 112 (705)
|+.||..|+.+.++.++. .+.+++. |+||||+|+..|+.+++++|++.| ++++.. +..|+
T Consensus 1 L~~A~~~~~~~~~~~ll~-~~~~~~~-----------------~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~-~~~g~ 60 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE-KGADINL-----------------GNTALHYAAENGNLEIVKLLLENG-ADINSQ-DKNGN 60 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH-TTSTTTS-----------------SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-B-STTSS
T ss_pred CHHHHHcCCHHHHHHHHH-CcCCCCC-----------------CCCHHHHHHHcCCHHHHHHHHHhc-cccccc-CCCCC
Confidence 678888999988888887 7766543 678999999999999999999999 999998 89999
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCcccC
Q 005270 113 TALHCAASGGSANSVEVVKLLLDASADVNSVD 144 (705)
Q Consensus 113 TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D 144 (705)
||||+|+..|+ .+++++|+++|++++.+|
T Consensus 61 t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 61 TALHYAAENGN---LEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp BHHHHHHHTTH---HHHHHHHHHTTT-TTSS-
T ss_pred CHHHHHHHcCC---HHHHHHHHHcCCCCCCcC
Confidence 99999999999 999999999999999875
No 56
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.49 E-value=1e-13 Score=121.00 Aligned_cols=102 Identities=24% Similarity=0.417 Sum_probs=94.0
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCC
Q 005270 33 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGV 112 (705)
Q Consensus 33 LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~ 112 (705)
+.+...+|++++++..+. .|.+||.. ..|+|||||||-+|+.+++++|+..| ++|+.+ |+.|.
T Consensus 6 ~~W~vkNG~~DeVk~~v~-~g~nVn~~--------------~ggR~plhyAAD~GQl~ilefli~iG-A~i~~k-DKygI 68 (117)
T KOG4214|consen 6 VAWNVKNGEIDEVKQSVN-EGLNVNEI--------------YGGRTPLHYAADYGQLSILEFLISIG-ANIQDK-DKYGI 68 (117)
T ss_pred HhhhhccCcHHHHHHHHH-ccccHHHH--------------hCCcccchHhhhcchHHHHHHHHHhc-cccCCc-cccCC
Confidence 677888999999999998 67888876 57999999999999999999999999 999998 99999
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 005270 113 TALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLI 154 (705)
Q Consensus 113 TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~A 154 (705)
|||.-|+..|| .++|++||+.|||-....-+|.+.+..+
T Consensus 69 TPLLsAvwEGH---~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 69 TPLLSAVWEGH---RDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred cHHHHHHHHhh---HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 99999999999 9999999999999999999998877654
No 57
>PHA02730 ankyrin-like protein; Provisional
Probab=99.48 E-value=2.2e-13 Score=157.72 Aligned_cols=131 Identities=12% Similarity=0.179 Sum_probs=108.5
Q ss_pred HHHHHHHhCC--HHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCC--Cc
Q 005270 32 ILLELTASDD--LDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS----KDVVSYVIKSGHV--DV 103 (705)
Q Consensus 32 ~LL~aAa~gd--~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~----~~vVk~LL~~G~a--DV 103 (705)
.|+.....++ ...+.++|.++|+++|.. ..|.||||+|+..++ .+++++||++| + |+
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k--------------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~G-a~~dI 410 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDNGATMDKT--------------TDNNYPLHDYFVNNNNIVDVNVVRFIVENN-GHMAI 410 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHCCCCCCcC--------------CCCCcHHHHHHHHcCCcchHHHHHHHHHcC-CCccc
Confidence 5677777674 567888888899999963 578999999998875 89999999998 6 68
Q ss_pred ccccCCCCChHHHH---HHhCCC------CChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 104 NRACGSDGVTALHC---AASGGS------ANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 104 n~~~d~~G~TpLH~---Aa~~G~------~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
|.+ +..|.||||. |...+. ....+++++|+.+|||+|.+|..|.||||+|+. .++.+++++|++
T Consensus 411 N~k-d~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~------~~~~eive~LI~ 483 (672)
T PHA02730 411 NHV-SNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVD------VNNIQFARRLLE 483 (672)
T ss_pred ccc-ccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHH------hCCHHHHHHHHH
Confidence 988 8899999994 332221 012467999999999999999999999999998 889999999999
Q ss_pred CCCCCCcccc
Q 005270 175 GSGTGCVEEI 184 (705)
Q Consensus 175 ~Gadi~~~~~ 184 (705)
+||+++..+.
T Consensus 484 ~GAdIN~~d~ 493 (672)
T PHA02730 484 YGASVNTTSR 493 (672)
T ss_pred CCCCCCCCCC
Confidence 9999965553
No 58
>PHA02730 ankyrin-like protein; Provisional
Probab=99.47 E-value=3.1e-13 Score=156.53 Aligned_cols=131 Identities=18% Similarity=0.107 Sum_probs=110.0
Q ss_pred CcchHHHHHHHHhCCH---HHHHHHHHhcCC--CCcccCccccccccCccCCCCCChHHHH---HHHcC---------CH
Q 005270 27 CYNFSILLELTASDDL---DGFRKAIEEDGH--DIDESGLWYGRIIGSRKMGFEERTPLMI---ASMFG---------SK 89 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~---~~v~~lL~e~Ga--dvn~~dlwyg~~~~s~~~~~~G~TPLh~---AA~~G---------~~ 89 (705)
.++.++||.||..++. .++.++|.++|+ ++|..+ ..|.||||. |...+ ..
T Consensus 376 ~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd-------------~~G~T~Lh~~i~a~~~n~~~~~~e~~~~ 442 (672)
T PHA02730 376 TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVS-------------NNGRLCMYGLILSRFNNCGYHCYETILI 442 (672)
T ss_pred CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccc-------------cCCCchHhHHHHHHhccccccccchhHH
Confidence 5677889888888752 566677777887 688887 889999994 33232 23
Q ss_pred HHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHhhCccCCCChHHH
Q 005270 90 DVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA-YGNRPADLIAKNCNLGFNSRKKV 168 (705)
Q Consensus 90 ~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~-~G~TPLh~Aa~~~~~~~~g~~ei 168 (705)
+++++|+.+| +|+|.+ +..|.||||+|+..++ .+++++|+++||++|..|. .|.||||+|+. ...++.++
T Consensus 443 ~ivk~LIs~G-ADINak-D~~G~TPLh~Aa~~~~---~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~----~~~~~~eI 513 (672)
T PHA02730 443 DVFDILSKYM-DDIDMI-DNENKTLLYYAVDVNN---IQFARRLLEYGASVNTTSRSIINTAIQKSSY----RRENKTKL 513 (672)
T ss_pred HHHHHHHhcc-cchhcc-CCCCCCHHHHHHHhCC---HHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH----hhcCcHHH
Confidence 5799999999 999999 9999999999999999 9999999999999999997 59999999975 11368999
Q ss_pred HHHHHhCCCCC
Q 005270 169 LQALLKGSGTG 179 (705)
Q Consensus 169 velLL~~Gadi 179 (705)
+++||++|+++
T Consensus 514 v~~LLs~ga~i 524 (672)
T PHA02730 514 VDLLLSYHPTL 524 (672)
T ss_pred HHHHHHcCCCH
Confidence 99999999988
No 59
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.46 E-value=1.9e-13 Score=164.09 Aligned_cols=137 Identities=26% Similarity=0.382 Sum_probs=112.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcC--------
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSG-------- 99 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G-------- 99 (705)
.+++++|.+|..|....+..++.+.|.++|... ..|.||||+|+..|+.++++.|++.+
T Consensus 439 lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s-------------~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~ 505 (1143)
T KOG4177|consen 439 LGYTPLHVAAKKGRYLQIARLLLQYGADPNAVS-------------KQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAK 505 (1143)
T ss_pred cCCChhhhhhhcccHhhhhhhHhhcCCCcchhc-------------cccCcchhhhhccCCchHHHHhhhcCCccCccch
Confidence 347788888888777777777777888888876 66666666666666666666655543
Q ss_pred ------------------------CCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 005270 100 ------------------------HVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIA 155 (705)
Q Consensus 100 ------------------------~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa 155 (705)
+++++.+ +.+|.||||.||.+|+ +.+|++||++|||++.+|+.|+||||.|+
T Consensus 506 ~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~-~~r~~TpLh~A~~~g~---v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa 581 (1143)
T KOG4177|consen 506 KGLTPLHLAADEDTVKVAKILLEHGANVDLR-TGRGYTPLHVAVHYGN---VDLVKFLLEHGADVNAKDKLGYTPLHQAA 581 (1143)
T ss_pred hccchhhhhhhhhhHHHHHHHhhcCCceehh-cccccchHHHHHhcCC---chHHHHhhhCCccccccCCCCCChhhHHH
Confidence 0666666 7889999999999999 99999999999999999999999999999
Q ss_pred hhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 156 KNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 156 ~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
. .|+.+|+++|+++||+++..+.+..
T Consensus 582 ~------~G~~~i~~LLlk~GA~vna~d~~g~ 607 (1143)
T KOG4177|consen 582 Q------QGHNDIAELLLKHGASVNAADLDGF 607 (1143)
T ss_pred H------cChHHHHHHHHHcCCCCCcccccCc
Confidence 8 8999999999999999977776654
No 60
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.44 E-value=7.7e-13 Score=141.22 Aligned_cols=105 Identities=20% Similarity=0.177 Sum_probs=90.7
Q ss_pred ccCCCCCChH-HHHHHHcCCHHHHHHHHHcCCCCccccc---CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCccc-C
Q 005270 70 RKMGFEERTP-LMIASMFGSKDVVSYVIKSGHVDVNRAC---GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSV-D 144 (705)
Q Consensus 70 ~~~~~~G~TP-Lh~AA~~G~~~vVk~LL~~G~aDVn~~~---d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~-D 144 (705)
+..|..|+|+ ||.|+.+|+.+++++|+++| +|+|... +..|.||||+|+..|+ .+++++|+++|||+|.. +
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~G-AdiN~~~~~sd~~g~TpLh~Aa~~~~---~eivklLL~~GADVN~~~~ 101 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLG-ADPEAPFPLSENSKTNPLIYAIDCDN---DDAAKLLIRYGADVNRYAE 101 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCC-CCccccCcccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcCcccC
Confidence 3445777776 45666779999999999999 9999861 3589999999999999 99999999999999986 4
Q ss_pred CCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcccc
Q 005270 145 AYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 145 ~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
..|.||||+|+. .++.+++++|+.+|++++..+.
T Consensus 102 ~~g~TpLh~Aa~------~~~~eivklLL~~GAdin~kd~ 135 (300)
T PHA02884 102 EAKITPLYISVL------HGCLKCLEILLSYGADINIQTN 135 (300)
T ss_pred CCCCCHHHHHHH------cCCHHHHHHHHHCCCCCCCCCC
Confidence 689999999998 8999999999999999965443
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.43 E-value=1.4e-12 Score=155.74 Aligned_cols=132 Identities=22% Similarity=0.218 Sum_probs=93.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHh-cCCCCcccCccccccccCccCCCCCChHHH-HHHHcCCHHHHHHHHHcCC-----
Q 005270 28 YNFSILLELTASDDLDGFRKAIEE-DGHDIDESGLWYGRIIGSRKMGFEERTPLM-IASMFGSKDVVSYVIKSGH----- 100 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e-~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh-~AA~~G~~~vVk~LL~~G~----- 100 (705)
++...++.||..||.+.++++|.+ .+.++|..| ..|+|||| .|+..++.+++++|++.|.
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d-------------~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G 82 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPD-------------RLGRSALFVAAIENENLELTELLLNLSCRGAVG 82 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcC-------------ccchhHHHHHHHhcChHHHHHHHHhCCCCCCcC
Confidence 344666777777777777666652 156666555 55566666 5555555555555555541
Q ss_pred --------------------------CC------cccc---cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-
Q 005270 101 --------------------------VD------VNRA---CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD- 144 (705)
Q Consensus 101 --------------------------aD------Vn~~---~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D- 144 (705)
.+ ++.. ....|.||||+|+..|+ .++|++||++|||++.++
T Consensus 83 ~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~---~eiVklLL~~GAdv~~~~~ 159 (743)
T TIGR00870 83 DTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQN---YEIVKLLLERGASVPARAC 159 (743)
T ss_pred hHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCcCcC
Confidence 00 0110 12459999999999999 999999999999998653
Q ss_pred -------------CCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 145 -------------AYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 145 -------------~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
..|.||||+|+. .++.+++++|+++|++++.
T Consensus 160 ~~~~~~~~~~~~~~~g~tpL~~Aa~------~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 160 GDFFVKSQGVDSFYHGESPLNAAAC------LGSPSIVALLSEDPADILT 203 (743)
T ss_pred CchhhcCCCCCcccccccHHHHHHH------hCCHHHHHHHhcCCcchhh
Confidence 368999999998 8999999999999998843
No 62
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.42 E-value=3.4e-12 Score=114.45 Aligned_cols=122 Identities=36% Similarity=0.515 Sum_probs=108.0
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..++.+.+..++ +.+.+++..+ ..|.||||+|+..+..+++++|+..+ ++++..
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li-~~~~~~~~~~-------------~~g~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~ 69 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLL-ENGADVNAKD-------------NDGRTPLHLAAKNGHLEIVKLLLEKG-ADVNAR 69 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCccC-------------CCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccc
Confidence 34678888988888886665555 4888877766 89999999999999999999999999 899887
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHH
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALL 173 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL 173 (705)
+..|.|++|+|+..++ .+++++|++.|.+++..|..|.||+++|.. .++.+++++|+
T Consensus 70 -~~~~~~~l~~a~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~Ll 126 (126)
T cd00204 70 -DKDGNTPLHLAARNGN---LDVVKLLLKHGADVNARDKDGRTPLHLAAK------NGHLEVVKLLL 126 (126)
T ss_pred -CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCCHHHHHHh------cCCHHHHHHhC
Confidence 7899999999999999 999999999999999999999999999988 68889998874
No 63
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.39 E-value=8.9e-13 Score=157.32 Aligned_cols=142 Identities=18% Similarity=0.140 Sum_probs=107.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCC--CcccCcccccc---------------ccC------------ccCCCCCCh
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHD--IDESGLWYGRI---------------IGS------------RKMGFEERT 78 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gad--vn~~dlwyg~~---------------~~s------------~~~~~~G~T 78 (705)
.+.++||++|+.++..+++++|.+.|.. ....-+.+... .+. ......|.|
T Consensus 51 ~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~T 130 (743)
T TIGR00870 51 LGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGIT 130 (743)
T ss_pred cchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCc
Confidence 4567777788888888888888877741 11110111100 000 011246999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccccC-------------CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC
Q 005270 79 PLMIASMFGSKDVVSYVIKSGHVDVNRACG-------------SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA 145 (705)
Q Consensus 79 PLh~AA~~G~~~vVk~LL~~G~aDVn~~~d-------------~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~ 145 (705)
|||+||..|+.++|++||++| +|++.++. ..|.||||+|+..|+ .+++++|++.|+|++.+|.
T Consensus 131 pLhlAa~~~~~eiVklLL~~G-Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~---~~iv~lLl~~gadin~~d~ 206 (743)
T TIGR00870 131 ALHLAAHRQNYEIVKLLLERG-ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS---PSIVALLSEDPADILTADS 206 (743)
T ss_pred HHHHHHHhCCHHHHHHHHhCC-CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCC---HHHHHHHhcCCcchhhHhh
Confidence 999999999999999999999 99997532 358999999999999 9999999999999999999
Q ss_pred CCCCHHHHHHhhCccCCCC---------hHHHHHHHHhCCCCC
Q 005270 146 YGNRPADLIAKNCNLGFNS---------RKKVLQALLKGSGTG 179 (705)
Q Consensus 146 ~G~TPLh~Aa~~~~~~~~g---------~~eivelLL~~Gadi 179 (705)
.|+||||+|+. .+ ...+.+++++.++..
T Consensus 207 ~g~T~Lh~A~~------~~~~~~~~~~l~~~~~~~l~~ll~~~ 243 (743)
T TIGR00870 207 LGNTLLHLLVM------ENEFKAEYEELSCQMYNFALSLLDKL 243 (743)
T ss_pred hhhHHHHHHHh------hhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999987 33 234667777766665
No 64
>PHA02792 ankyrin-like protein; Provisional
Probab=99.38 E-value=1.3e-12 Score=150.03 Aligned_cols=126 Identities=14% Similarity=0.139 Sum_probs=107.3
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHH-cCCHHHHHHHHHcCCCCcc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASM-FGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~-~G~~~vVk~LL~~G~aDVn 104 (705)
-.+++++++..|..++..+++++|.++|+++|..+ ..+.|+||+|+. .++.++|++||+.| ||++
T Consensus 68 n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~-------------n~~~~~l~ya~~~~~~~eivk~Ll~~G-ad~~ 133 (631)
T PHA02792 68 NINDFDIFEYLCSDNIDIELLKLLISKGLEINSIK-------------NGINIVEKYATTSNPNVDVFKLLLDKG-IPTC 133 (631)
T ss_pred ccCCccHHHHHHHhcccHHHHHHHHHcCCCccccc-------------CCCCcceeEeecCCCChHHHHHHHHCC-CCcc
Confidence 34667888877777666666666777999999997 678999999966 69999999999999 8742
Q ss_pred ------------------------------------cccCCCCChHHHHHHhCC-------CCChHHHHHHHHHCCCCCc
Q 005270 105 ------------------------------------RACGSDGVTALHCAASGG-------SANSVEVVKLLLDASADVN 141 (705)
Q Consensus 105 ------------------------------------~~~d~~G~TpLH~Aa~~G-------~~~~~eivklLL~~GAdin 141 (705)
.. +..|.||||+|+..+ + .+++++||++|++++
T Consensus 134 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~g~t~L~~~i~~~s~~~~~~~---~~v~k~Li~~g~~~~ 209 (631)
T PHA02792 134 SNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYD-DRMGKTVLYYYIITRSQDGYATS---LDVINYLISHEKEMR 209 (631)
T ss_pred cccccCcchhhhhcccccccchhhhccccccccccccC-CCCCCchHHHHHhhCCcccccCC---HHHHHHHHhCCCCcC
Confidence 12 456999999999998 6 999999999999999
Q ss_pred ccCCCCCCHHHHHHhhCccCCCC--hHHHHHHHHhC
Q 005270 142 SVDAYGNRPADLIAKNCNLGFNS--RKKVLQALLKG 175 (705)
Q Consensus 142 ~~D~~G~TPLh~Aa~~~~~~~~g--~~eivelLL~~ 175 (705)
..|..|.||||+|+. .. ..+++++|++.
T Consensus 210 ~~d~~g~t~l~~~~~------~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 210 YYTYREHTTLYYYVD------KCDIKREIFDALFDS 239 (631)
T ss_pred ccCCCCChHHHHHHH------cccchHHHHHHHHhc
Confidence 999999999999998 55 78999999984
No 65
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.38 E-value=4.5e-12 Score=124.88 Aligned_cols=123 Identities=32% Similarity=0.435 Sum_probs=109.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC-----HHHHHHHHHcCCC--
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS-----KDVVSYVIKSGHV-- 101 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~-----~~vVk~LL~~G~a-- 101 (705)
...+++.++..++...+ .++...|++++..+ ..|.||||+|+..|+ .+++++||+.| +
T Consensus 73 ~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~-------------~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g-~~~ 137 (235)
T COG0666 73 GRLPLHSAASKGDDKIV-KLLLASGADVNAKD-------------ADGDTPLHLAALNGNPPEGNIEVAKLLLEAG-ADL 137 (235)
T ss_pred ccCHHHHHHHcCcHHHH-HHHHHcCCCccccc-------------CCCCcHHHHHHhcCCcccchHHHHHHHHHcC-CCC
Confidence 45677777777777777 44555999998887 999999999999999 99999999999 7
Q ss_pred -CcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC
Q 005270 102 -DVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS 176 (705)
Q Consensus 102 -DVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G 176 (705)
+.+.. +..|.||||+|+..|+ .+++++|++.|++++..+..|.|++++|+. .++.++++.|+..+
T Consensus 138 ~~~~~~-~~~g~tpl~~A~~~~~---~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~------~~~~~~~~~l~~~~ 203 (235)
T COG0666 138 DVNNLR-DEDGNTPLHWAALNGD---ADIVELLLEAGADPNSRNSYGVTALDPAAK------NGRIELVKLLLDKG 203 (235)
T ss_pred CCcccc-CCCCCchhHHHHHcCc---hHHHHHHHhcCCCCcccccCCCcchhhhcc------cchHHHHHHHHhcC
Confidence 45554 9999999999999999 899999999999999999999999999988 89999999999976
No 66
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.38 E-value=9.1e-13 Score=126.97 Aligned_cols=98 Identities=22% Similarity=0.184 Sum_probs=89.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 005270 76 ERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIA 155 (705)
Q Consensus 76 G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa 155 (705)
-.--+.+|+..+.+..|+.||+...--||.+ |.+|.||||-|+++|+ ++||+.||..||+++++...||||||-|+
T Consensus 63 p~rl~lwaae~nrl~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h---~div~~ll~~gAn~~a~T~~GWTPLhSAc 138 (228)
T KOG0512|consen 63 PIRLLLWAAEKNRLTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGH---LDIVHELLLSGANKEAKTNEGWTPLHSAC 138 (228)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhcccccccc-ccccccHHHHHHhcCc---hHHHHHHHHccCCcccccccCccchhhhh
Confidence 3345788999999999999999884568887 9999999999999999 99999999999999999999999999999
Q ss_pred hhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 156 KNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 156 ~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+ .++.+|+-+||.+|+|++...
T Consensus 139 k------WnN~~va~~LLqhgaDVnA~t 160 (228)
T KOG0512|consen 139 K------WNNFEVAGRLLQHGADVNAQT 160 (228)
T ss_pred c------ccchhHHHHHHhccCcccccc
Confidence 8 899999999999999995443
No 67
>PHA02792 ankyrin-like protein; Provisional
Probab=99.35 E-value=5.7e-12 Score=144.83 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=105.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCC--CChHHHHHHHcCCH---HHHHHHHHcCCCCc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFE--ERTPLMIASMFGSK---DVVSYVIKSGHVDV 103 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~--G~TPLh~AA~~G~~---~vVk~LL~~G~aDV 103 (705)
....++.||..++.+.++.| .++|++++..+ .. +.||||+|+..... +++++|+++| +|+
T Consensus 339 ~~n~~~~Aa~~gn~eIVelL-Is~GADIN~kD-------------~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G-ADI 403 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYI-LKNGNVVVEDD-------------DNIINIMPLFPTLSIHESDVLSILKLCKPYI-DDI 403 (631)
T ss_pred cchHHHHHHHcCCHHHHHHH-HHcCCchhhhc-------------CCCCChhHHHHHHHhccHhHHHHHHHHHhcC-Ccc
Confidence 45668888777888766555 45899999887 44 57999998876654 4578889999 999
Q ss_pred ccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCcc----CCCChHHHHHHHHhCCCCC
Q 005270 104 NRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNL----GFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~----~~~g~~eivelLL~~Gadi 179 (705)
|.+ +..|.||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..... ......+++++||.+|.++
T Consensus 404 N~k-D~~G~TPLh~Aa~~~n---~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 404 NKI-DKHGRSILYYCIESHS---VSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred ccc-cccCcchHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 998 9999999999999998 9999999999999999999999999998641000 0122357799999999887
No 68
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.35 E-value=4.5e-12 Score=152.95 Aligned_cols=95 Identities=24% Similarity=0.288 Sum_probs=90.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADL 153 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~ 153 (705)
.++.++||.||..|+.++++.|++.| +|+|.. |..|.||||+|+..|+ .+++++|+++|+|+|.+|.+|+||||+
T Consensus 523 ~~~~~~L~~Aa~~g~~~~l~~Ll~~G-~d~n~~-d~~G~TpLh~Aa~~g~---~~~v~~Ll~~gadin~~d~~G~TpL~~ 597 (823)
T PLN03192 523 PNMASNLLTVASTGNAALLEELLKAK-LDPDIG-DSKGRTPLHIAASKGY---EDCVLVLLKHACNVHIRDANGNTALWN 597 (823)
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCC-CCCCCC-CCCCCCHHHHHHHcCh---HHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 45679999999999999999999999 999998 9999999999999999 999999999999999999999999999
Q ss_pred HHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 154 IAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 154 Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|+. .++.+++++|++.++..
T Consensus 598 A~~------~g~~~iv~~L~~~~~~~ 617 (823)
T PLN03192 598 AIS------AKHHKIFRILYHFASIS 617 (823)
T ss_pred HHH------hCCHHHHHHHHhcCccc
Confidence 998 89999999999887765
No 69
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.34 E-value=3.9e-12 Score=146.07 Aligned_cols=138 Identities=23% Similarity=0.285 Sum_probs=121.0
Q ss_pred ccCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccC------------CCCCChHHHHHHHcCCHHHH
Q 005270 25 GLCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKM------------GFEERTPLMIASMFGSKDVV 92 (705)
Q Consensus 25 ~~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~------------~~~G~TPLh~AA~~G~~~vV 92 (705)
..+++.++||.|+.+.|.+.+..+|. .|+||+++. +|.....++. -..|..||-.||..++.+++
T Consensus 180 eeY~GqSaLHiAIv~~~~~~V~lLl~-~gADV~aRa--~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eiv 256 (782)
T KOG3676|consen 180 EEYYGQSALHIAIVNRDAELVRLLLA-AGADVHARA--CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIV 256 (782)
T ss_pred HhhcCcchHHHHHHhccHHHHHHHHH-cCCchhhHh--hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHH
Confidence 34677899999999998887766665 999999987 5655544443 35689999999999999999
Q ss_pred HHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCC--CcccCCCCCCHHHHHHhhCccCCCChHHHHH
Q 005270 93 SYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASAD--VNSVDAYGNRPADLIAKNCNLGFNSRKKVLQ 170 (705)
Q Consensus 93 k~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAd--in~~D~~G~TPLh~Aa~~~~~~~~g~~eive 170 (705)
++|+++| ||+|.+ |..|+|.||..+..-. .++..++|++|++ ...+|+.|.|||.+|++ .|+++|.+
T Consensus 257 rlLl~~g-Ad~~aq-DS~GNTVLH~lVi~~~---~~My~~~L~~ga~~l~~v~N~qgLTPLtLAak------lGk~emf~ 325 (782)
T KOG3676|consen 257 RLLLAHG-ADPNAQ-DSNGNTVLHMLVIHFV---TEMYDLALELGANALEHVRNNQGLTPLTLAAK------LGKKEMFQ 325 (782)
T ss_pred HHHHhcC-CCCCcc-ccCCChHHHHHHHHHH---HHHHHHHHhcCCCccccccccCCCChHHHHHH------hhhHHHHH
Confidence 9999999 999999 9999999999998755 8999999999999 88999999999999999 99999999
Q ss_pred HHHhCC
Q 005270 171 ALLKGS 176 (705)
Q Consensus 171 lLL~~G 176 (705)
.+|+..
T Consensus 326 ~ile~~ 331 (782)
T KOG3676|consen 326 HILERR 331 (782)
T ss_pred HHHHhh
Confidence 999883
No 70
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=4.8e-12 Score=138.30 Aligned_cols=123 Identities=29% Similarity=0.333 Sum_probs=105.3
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
-...||.||..|.++.|..++.+ --|+...+ .+|.|+||-|+..||.+||+|||+.| +|||.. |
T Consensus 550 PLaLLLDaaLeGEldlVq~~i~e-v~DpSqpN-------------dEGITaLHNAiCaghyeIVkFLi~~g-anVNa~-D 613 (752)
T KOG0515|consen 550 PLALLLDAALEGELDLVQRIIYE-VTDPSQPN-------------DEGITALHNAICAGHYEIVKFLIEFG-ANVNAA-D 613 (752)
T ss_pred hHHHHHhhhhcchHHHHHHHHHh-hcCCCCCC-------------ccchhHHhhhhhcchhHHHHHHHhcC-CcccCc-c
Confidence 34667899999999999998873 45666665 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
.+||||||||+..++ +.+++.|++.|+-|-+.. .++.|+..-+-. ...|...|.++|..
T Consensus 614 SdGWTPLHCAASCNn---v~~ckqLVe~GaavfAsTlSDmeTa~eKCee----~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 614 SDGWTPLHCAASCNN---VPMCKQLVESGAAVFASTLSDMETAAEKCEE----MEEGYDQCSQYLYG 673 (752)
T ss_pred CCCCchhhhhhhcCc---hHHHHHHHhccceEEeeecccccchhhhcch----hhhhHHHHHHHHHH
Confidence 999999999999888 999999999999886554 578888876532 44788899999974
No 71
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.30 E-value=5.3e-12 Score=121.36 Aligned_cols=97 Identities=19% Similarity=0.179 Sum_probs=85.0
Q ss_pred cchHHHHHHHHhCCHH--HHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCcc
Q 005270 28 YNFSILLELTASDDLD--GFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKS-GHVDVN 104 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~--~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~-G~aDVn 104 (705)
++.++||.|+..+..+ ++.++|.+.|+++|.++ +..|.||||+|+..|+.+++++|+.. | +|++
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~------------~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g-~d~n 120 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKE------------RVFGNTPLHIAVYTQNYELATWLCNQPG-VNME 120 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHHHHcCCCccccC------------CCCCCcHHHHHHHhCCHHHHHHHHhCCC-CCCc
Confidence 4668888888877664 45677777999999986 24899999999999999999999985 7 9999
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCc
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASADVN 141 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin 141 (705)
.. +..|.||||+|+..|+ .+++++|+++|++++
T Consensus 121 ~~-~~~g~tpL~~A~~~~~---~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 121 IL-NYAFKTPYYVACERHD---AKMMNILRAKGAQCK 153 (154)
T ss_pred cc-cCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCC
Confidence 98 9999999999999999 999999999999875
No 72
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.29 E-value=7.1e-12 Score=109.55 Aligned_cols=96 Identities=23% Similarity=0.367 Sum_probs=88.3
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhC
Q 005270 79 PLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNC 158 (705)
Q Consensus 79 PLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~ 158 (705)
-+++++.+|.++-|+..+..| .|||.. ..|+||||||+-+|. .+++++|+..||+++.+|++|.|||--|+.
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~~--~ggR~plhyAAD~GQ---l~ilefli~iGA~i~~kDKygITPLLsAvw-- 76 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEG-LNVNEI--YGGRTPLHYAADYGQ---LSILEFLISIGANIQDKDKYGITPLLSAVW-- 76 (117)
T ss_pred hHhhhhccCcHHHHHHHHHcc-ccHHHH--hCCcccchHhhhcch---HHHHHHHHHhccccCCccccCCcHHHHHHH--
Confidence 468999999999999999999 999985 489999999999999 999999999999999999999999999988
Q ss_pred ccCCCChHHHHHHHHhCCCCCCcccccc
Q 005270 159 NLGFNSRKKVLQALLKGSGTGCVEEIDN 186 (705)
Q Consensus 159 ~~~~~g~~eivelLL~~Gadi~~~~~~~ 186 (705)
.|+.+||++||..||+-.+..-+.
T Consensus 77 ----EGH~~cVklLL~~GAdrt~~~PdG 100 (117)
T KOG4214|consen 77 ----EGHRDCVKLLLQNGADRTIHAPDG 100 (117)
T ss_pred ----HhhHHHHHHHHHcCcccceeCCCc
Confidence 999999999999999985555444
No 73
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.27 E-value=5.3e-12 Score=143.40 Aligned_cols=141 Identities=20% Similarity=0.251 Sum_probs=120.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
+-++.|+..+|.+.+..+|...+.. ...-+..-+....+..|..|.|.||.|+++|+.+++++|+++. +-++.. +..
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r-~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~e-a~ldl~-d~k 81 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGR-SGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYE-ALLDLC-DTK 81 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCC-CCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcch-hhhhhh-hcc
Confidence 4488999999999999999865541 1111223344444556789999999999999999999999998 878776 899
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|.+|||+|+..|+ .+++|+||.++..+|+.+..|.||||.|+. .++.+++++||.+|++..+.+
T Consensus 82 g~~plhlaaw~g~---~e~vkmll~q~d~~na~~~e~~tplhlaaq------hgh~dvv~~Ll~~~adp~i~n 145 (854)
T KOG0507|consen 82 GILPLHLAAWNGN---LEIVKMLLLQTDILNAVNIENETPLHLAAQ------HGHLEVVFYLLKKNADPFIRN 145 (854)
T ss_pred CcceEEehhhcCc---chHHHHHHhcccCCCcccccCcCccchhhh------hcchHHHHHHHhcCCCccccC
Confidence 9999999999999 999999999999999999999999999998 999999999999999995544
No 74
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.27 E-value=2.4e-11 Score=124.99 Aligned_cols=125 Identities=24% Similarity=0.252 Sum_probs=111.9
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
++...++|++++..+|.+....+|.. --.+|..| ..|.++|+.|++.|+.++|++||+.| +|||.
T Consensus 9 ld~~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D-------------~sGMs~LahAaykGnl~~v~lll~~g-aDvN~ 73 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEAALALLST-VRQVNQRD-------------PSGMSVLAHAAYKGNLTLVELLLELG-ADVND 73 (396)
T ss_pred ccchhhHHHHHHccCcHHHHHHHHHH-hhhhhccC-------------CCcccHHHHHHhcCcHHHHHHHHHhC-CCcCc
Confidence 44556899999999999999999873 33488887 89999999999999999999999999 99998
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
.-+..+.||||.|+..|+ .++.++||+.|+.....|.-|+|+-.+|+- -|+.+||.++-.
T Consensus 74 ~qhg~~YTpLmFAALSGn---~dvcrllldaGa~~~~vNsvgrTAaqmAAF------VG~H~CV~iINN 133 (396)
T KOG1710|consen 74 KQHGTLYTPLMFAALSGN---QDVCRLLLDAGARMYLVNSVGRTAAQMAAF------VGHHECVAIINN 133 (396)
T ss_pred ccccccccHHHHHHHcCC---chHHHHHHhccCccccccchhhhHHHHHHH------hcchHHHHHHhc
Confidence 767789999999999999 999999999999999999999999999987 788888877643
No 75
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.27 E-value=9.1e-12 Score=141.52 Aligned_cols=124 Identities=23% Similarity=0.241 Sum_probs=114.4
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
+++|+.||||+.+|+...++.+| ++.+-++..+ .+|.+|||+|+..|+.++|++||..+ ..+|..
T Consensus 47 ~~gfTalhha~Lng~~~is~lll-e~ea~ldl~d-------------~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~ 111 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLL-DYEALLDLCD-------------TKGILPLHLAAWNGNLEIVKMLLLQT-DILNAV 111 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHh-cchhhhhhhh-------------ccCcceEEehhhcCcchHHHHHHhcc-cCCCcc
Confidence 37899999999998887765554 4788888887 89999999999999999999999999 888988
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
...|.||||.||..|+ .+++.+||.+|+|+-.+|+.+.|+|++|++ .|+.++++.|+..
T Consensus 112 -~~e~~tplhlaaqhgh---~dvv~~Ll~~~adp~i~nns~~t~ldlA~q------fgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 112 -NIENETPLHLAAQHGH---LEVVFYLLKKNADPFIRNNSKETVLDLASR------FGRAEVVQMLLQK 170 (854)
T ss_pred -cccCcCccchhhhhcc---hHHHHHHHhcCCCccccCcccccHHHHHHH------hhhhHHHHHHhhh
Confidence 8899999999999999 999999999999999999999999999999 8999999999987
No 76
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.27 E-value=5.5e-11 Score=106.59 Aligned_cols=96 Identities=43% Similarity=0.607 Sum_probs=90.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
+.+|.||||+|+..|+.+++++|++.+ .+++.. +..|.|+||+|+..+. .+++++|++.|++++..+..|.||+|
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~-~~~~~~-~~~g~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENG-ADVNAK-DNDGRTPLHLAAKNGH---LEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHH
Confidence 468999999999999999999999999 887776 8899999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+|+. .++.+++++|+.++.++
T Consensus 79 ~a~~------~~~~~~~~~L~~~~~~~ 99 (126)
T cd00204 79 LAAR------NGNLDVVKLLLKHGADV 99 (126)
T ss_pred HHHH------cCcHHHHHHHHHcCCCC
Confidence 9998 88899999999998666
No 77
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.24 E-value=2.2e-11 Score=134.39 Aligned_cols=171 Identities=22% Similarity=0.306 Sum_probs=132.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
...++.|+..+|.+.+..+|. .|+++|..+ .+|.|+||-+|.-.+.+||++|+++| ++||.. |.
T Consensus 41 sa~~l~A~~~~d~~ev~~ll~-~ga~~~~~n-------------~DglTalhq~~id~~~e~v~~l~e~g-a~Vn~~-d~ 104 (527)
T KOG0505|consen 41 SAVFLEACSRGDLEEVRKLLN-RGASPNLCN-------------VDGLTALHQACIDDNLEMVKFLVENG-ANVNAQ-DN 104 (527)
T ss_pred hHHHHhccccccHHHHHHHhc-cCCCccccC-------------CccchhHHHHHhcccHHHHHHHHHhc-CCcccc-cc
Confidence 356888999999999999888 788888877 89999999999999999999999999 999998 99
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcc-----------------------------------------------
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNS----------------------------------------------- 142 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~----------------------------------------------- 142 (705)
.||||||.|+..|+ +.++++|+.+||++..
T Consensus 105 e~wtPlhaaascg~---~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~ 181 (527)
T KOG0505|consen 105 EGWTPLHAAASCGY---LNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDA 181 (527)
T ss_pred ccCCcchhhccccc---HHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHH
Confidence 99999999999999 8888888888876433
Q ss_pred ------------cCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhcCCCCccchhcc
Q 005270 143 ------------VDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLK 210 (705)
Q Consensus 143 ------------~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e~~~~~~~~ll~ 210 (705)
.+..|-|.||+|+. +|..++.++||++|.++++.+.+.-........-+.++ +.- .|+.
T Consensus 182 ~q~l~~G~~~d~~~~rG~T~lHvAaa------~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~--~~e-lL~~ 252 (527)
T KOG0505|consen 182 RQWLNAGAELDARHARGATALHVAAA------NGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQED--ACE-LLVE 252 (527)
T ss_pred HHHHhccccccccccccchHHHHHHh------hhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHh--HHH-HHHH
Confidence 33446688888887 89999999999999999888776533322211111111 111 1111
Q ss_pred ------ccccccCCCcccccCCCc
Q 005270 211 ------DGAEKKEYPVDLTLPDIK 228 (705)
Q Consensus 211 ------~~~~kke~Pldlalpd~~ 228 (705)
..+..+++|+|++..+..
T Consensus 253 ~ga~~d~~t~~g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 253 HGADMDAKTKMGETPLDVADEEEL 276 (527)
T ss_pred hhcccchhhhcCCCCccchhhhhH
Confidence 126678999998876544
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.21 E-value=1.4e-10 Score=136.76 Aligned_cols=95 Identities=28% Similarity=0.389 Sum_probs=88.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhh
Q 005270 78 TPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKN 157 (705)
Q Consensus 78 TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~ 157 (705)
+.||.|+..|+.++|++|++.| +|+|.+ +..|.||||+|+..|+ .+++++||++|+|++.+|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G-adin~~-d~~G~TpLh~Aa~~g~---~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~- 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG-ADPNCR-DYDGRTPLHIACANGH---VQVVRVLLEFGADPTLLDKDGKTPLELAEE- 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC-CCCCCc-CCCCCcHHHHHHHCCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH-
Confidence 4588999999999999999999 999998 9999999999999999 999999999999999999999999999998
Q ss_pred CccCCCChHHHHHHHHhC-------CCCCCccc
Q 005270 158 CNLGFNSRKKVLQALLKG-------SGTGCVEE 183 (705)
Q Consensus 158 ~~~~~~g~~eivelLL~~-------Gadi~~~~ 183 (705)
.++.+++++|+++ |++++..+
T Consensus 158 -----~g~~~iv~~Ll~~~~~~~~~ga~~~~~~ 185 (664)
T PTZ00322 158 -----NGFREVVQLLSRHSQCHFELGANAKPDS 185 (664)
T ss_pred -----CCcHHHHHHHHhCCCcccccCCCCCccc
Confidence 8999999999998 66664433
No 79
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.20 E-value=6.6e-11 Score=139.60 Aligned_cols=106 Identities=32% Similarity=0.367 Sum_probs=96.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
..|+++|..|+.+.++.+|. .|+++|..+ ..|+||||+|+..|+.++|++||+.| +|+|.+ +.+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~-~Gadin~~d-------------~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~-d~~ 147 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLT-GGADPNCRD-------------YDGRTPLHIACANGHVQVVRVLLEFG-ADPTLL-DKD 147 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCC-CCC
Confidence 35888999999988766665 899999987 89999999999999999999999999 999998 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHC-------CCCCcccCCCCCCHHHHHH
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDA-------SADVNSVDAYGNRPADLIA 155 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~-------GAdin~~D~~G~TPLh~Aa 155 (705)
|.||||+|+..|+ .+++++|+++ |++++..+..|.+|+..+.
T Consensus 148 G~TpLh~A~~~g~---~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 148 GKTPLELAEENGF---REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred CCCHHHHHHHCCc---HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999999999 9999999998 8999999998988877654
No 80
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.18 E-value=1.9e-11 Score=98.31 Aligned_cols=56 Identities=41% Similarity=0.543 Sum_probs=33.3
Q ss_pred HHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 005270 95 VIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLI 154 (705)
Q Consensus 95 LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~A 154 (705)
||++|.+++|.. |..|.||||+|+.+|+ .+++++||+.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~-d~~G~T~LH~A~~~g~---~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ-DKYGNTPLHWAARYGH---SEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT----TTS--HHHHHHHHT----HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc-CCCCCcHHHHHHHcCc---HHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 466666889988 9999999999999999 9999999999999999999999999987
No 81
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.15 E-value=7.7e-11 Score=93.77 Aligned_cols=54 Identities=41% Similarity=0.691 Sum_probs=46.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHH
Q 005270 76 ERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLL 134 (705)
Q Consensus 76 G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL 134 (705)
|+||||+|+..|+.+++++|++.| +|+|.. |.+|.||||+|+..|+ .+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~-d~~g~t~lh~A~~~g~---~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQ-DEDGRTPLHYAAKNGN---IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B--TTS--HHHHHHHTT----HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-CCCCCC-CCCCCCHHHHHHHccC---HHHHHHHC
Confidence 689999999999999999999999 999999 9999999999999999 99999986
No 82
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=1e-10 Score=128.20 Aligned_cols=118 Identities=25% Similarity=0.353 Sum_probs=95.0
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhC
Q 005270 79 PLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNC 158 (705)
Q Consensus 79 PLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~ 158 (705)
.|.-|+..|-+++|+.++..- -|+... +..|.|+||-|+..|| .+||++||++|+|+|+.|.+||||||+|+.
T Consensus 553 LLLDaaLeGEldlVq~~i~ev-~DpSqp-NdEGITaLHNAiCagh---yeIVkFLi~~ganVNa~DSdGWTPLHCAAS-- 625 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEV-TDPSQP-NDEGITALHNAICAGH---YEIVKFLIEFGANVNAADSDGWTPLHCAAS-- 625 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhh-cCCCCC-CccchhHHhhhhhcch---hHHHHHHHhcCCcccCccCCCCchhhhhhh--
Confidence 346689999999999999887 788887 8899999999999999 999999999999999999999999999998
Q ss_pred ccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhcCCCCccchh
Q 005270 159 NLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRV 208 (705)
Q Consensus 159 ~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e~~~~~~~~l 208 (705)
.++.-+++.|++.|+.|....+-+. .+.+..+.+.+++......+
T Consensus 626 ----CNnv~~ckqLVe~GaavfAsTlSDm-eTa~eKCee~eeGY~~Csqy 670 (752)
T KOG0515|consen 626 ----CNNVPMCKQLVESGAAVFASTLSDM-ETAAEKCEEMEEGYDQCSQY 670 (752)
T ss_pred ----cCchHHHHHHHhccceEEeeecccc-cchhhhcchhhhhHHHHHHH
Confidence 8999999999999999844333221 22334444444444444333
No 83
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.11 E-value=3.2e-10 Score=130.54 Aligned_cols=131 Identities=21% Similarity=0.212 Sum_probs=102.7
Q ss_pred chHHHHHHHH--hCCHHHHHHHHH-hcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 29 NFSILLELTA--SDDLDGFRKAIE-EDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 29 ~~s~LL~aAa--~gd~~~v~~lL~-e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
+.+.||.+.. ..+..++.+.|. -..--||..- ..-...|.||||+|+.+.+.++|++||+.| |||+.
T Consensus 143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~---------~~eeY~GqSaLHiAIv~~~~~~V~lLl~~g-ADV~a 212 (782)
T KOG3676|consen 143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIY---------TSEEYYGQSALHIAIVNRDAELVRLLLAAG-ADVHA 212 (782)
T ss_pred hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhh---------hhHhhcCcchHHHHHHhccHHHHHHHHHcC-Cchhh
Confidence 3465666555 455544444444 3333333321 011367999999999999999999999999 99997
Q ss_pred cc----------------------CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCC
Q 005270 106 AC----------------------GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFN 163 (705)
Q Consensus 106 ~~----------------------d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~ 163 (705)
+| -..|..||-+||--++ .+|+++|+++|||++++|.+|+|.||..+. .
T Consensus 213 Ra~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq---~eivrlLl~~gAd~~aqDS~GNTVLH~lVi------~ 283 (782)
T KOG3676|consen 213 RACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ---PEIVRLLLAHGADPNAQDSNGNTVLHMLVI------H 283 (782)
T ss_pred HhhccccCcccccccccccCCcceeeeccCchHHHHHcCC---HHHHHHHHhcCCCCCccccCCChHHHHHHH------H
Confidence 53 1247889999999888 999999999999999999999999999988 6
Q ss_pred ChHHHHHHHHhCCCC
Q 005270 164 SRKKVLQALLKGSGT 178 (705)
Q Consensus 164 g~~eivelLL~~Gad 178 (705)
-..++..++|++|++
T Consensus 284 ~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 284 FVTEMYDLALELGAN 298 (782)
T ss_pred HHHHHHHHHHhcCCC
Confidence 788999999999998
No 84
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.10 E-value=1.8e-10 Score=91.68 Aligned_cols=54 Identities=44% Similarity=0.661 Sum_probs=46.4
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHH
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALL 173 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL 173 (705)
|+|+||+|+..|+ .+++++|++.|+|++.+|.+|+||||+|+. .++.+++++||
T Consensus 1 g~t~lh~A~~~g~---~~~~~~Ll~~~~din~~d~~g~t~lh~A~~------~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGN---LEIVKLLLEHGADINAQDEDGRTPLHYAAK------NGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT----HHHHHHHHHTTSGTT-B-TTS--HHHHHHH------TT-HHHHHHHH
T ss_pred CChHHHHHHHhCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------ccCHHHHHHHC
Confidence 6899999999999 999999999999999999999999999999 99999999996
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.06 E-value=1.5e-10 Score=93.13 Aligned_cols=53 Identities=36% Similarity=0.575 Sum_probs=33.0
Q ss_pred hcC-CCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHH
Q 005270 51 EDG-HDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCA 118 (705)
Q Consensus 51 e~G-advn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~A 118 (705)
+.| .++|..+ ..|.||||+||.+|+.++|++||+.| +|++.+ +.+|+||||+|
T Consensus 3 ~~~~~~~n~~d-------------~~G~T~LH~A~~~g~~~~v~~Ll~~g-~d~~~~-d~~G~Tpl~~A 56 (56)
T PF13857_consen 3 EHGPADVNAQD-------------KYGNTPLHWAARYGHSEVVRLLLQNG-ADPNAK-DKDGQTPLHYA 56 (56)
T ss_dssp ---T--TT----------------TTS--HHHHHHHHT-HHHHHHHHHCT---TT----TTS--HHHH-
T ss_pred ccCcCCCcCcC-------------CCCCcHHHHHHHcCcHHHHHHHHHCc-CCCCCC-cCCCCCHHHhC
Confidence 355 7888887 99999999999999999999999888 999998 99999999997
No 86
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.04 E-value=1.4e-10 Score=135.00 Aligned_cols=129 Identities=24% Similarity=0.282 Sum_probs=118.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
.+-|..|+.|+++++.++|...|++|..+| +.|.+||.+|+..||+.+|+.|+++. +||....|+.
T Consensus 758 ~t~LT~acaggh~e~vellv~rganiehrd-------------kkgf~plImaatagh~tvV~~llk~h-a~veaQsdrt 823 (2131)
T KOG4369|consen 758 KTNLTSACAGGHREEVELLVVRGANIEHRD-------------KKGFVPLIMAATAGHITVVQDLLKAH-ADVEAQSDRT 823 (2131)
T ss_pred cccccccccCccHHHHHHHHHhcccccccc-------------cccchhhhhhcccCchHHHHHHHhhh-hhhhhhcccc
Confidence 445667777888888888888999999998 99999999999999999999999999 9999988999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+.|+|-+||.+|+ .++|++||.+||+-..++....|||.+|.. .+..+||.+||.+|+.|+-.
T Consensus 824 kdt~lSlacsggr---~~vvelLl~~gankehrnvsDytPlsla~S------ggy~~iI~~llS~GseInSr 886 (2131)
T KOG4369|consen 824 KDTMLSLACSGGR---TRVVELLLNAGANKEHRNVSDYTPLSLARS------GGYTKIIHALLSSGSEINSR 886 (2131)
T ss_pred cCceEEEecCCCc---chHHHHHHHhhccccccchhhcCchhhhcC------cchHHHHHHHhhcccccccc
Confidence 9999999999999 999999999999999999999999999987 89999999999999998543
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.99 E-value=6.2e-09 Score=102.50 Aligned_cols=101 Identities=36% Similarity=0.487 Sum_probs=91.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCC--CChHHHHHHHHHCCC---CCcccCCCC
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGS--ANSVEVVKLLLDASA---DVNSVDAYG 147 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~--~~~~eivklLL~~GA---din~~D~~G 147 (705)
+..+.+++|.++..+..+++++++..+ ++++.. +.+|.|+||+|+..|+ ....+++++||+.|+ +.+..|..|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g 147 (235)
T COG0666 70 DLDGRLPLHSAASKGDDKIVKLLLASG-ADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDG 147 (235)
T ss_pred CccccCHHHHHHHcCcHHHHHHHHHcC-CCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCC
Confidence 467899999999999999999999999 999887 9999999999999886 123699999999999 566779999
Q ss_pred CCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 148 NRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 148 ~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+||||+|+. .++.+++++|++.|++++.
T Consensus 148 ~tpl~~A~~------~~~~~~~~~ll~~~~~~~~ 175 (235)
T COG0666 148 NTPLHWAAL------NGDADIVELLLEAGADPNS 175 (235)
T ss_pred CchhHHHHH------cCchHHHHHHHhcCCCCcc
Confidence 999999998 8889999999999999833
No 88
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.98 E-value=2e-10 Score=133.71 Aligned_cols=178 Identities=22% Similarity=0.194 Sum_probs=138.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.++++ +-.|+.|+...++++|+..|+.||.+. -.+.|..|||.|++.||...++.||+.| .|||...
T Consensus 856 sDytP-lsla~Sggy~~iI~~llS~GseInSrt-----------gSklgisPLmlatmngh~~at~~ll~~g-sdiNaqI 922 (2131)
T KOG4369|consen 856 SDYTP-LSLARSGGYTKIIHALLSSGSEINSRT-----------GSKLGISPLMLATMNGHQAATLSLLQPG-SDINAQI 922 (2131)
T ss_pred hhcCc-hhhhcCcchHHHHHHHhhccccccccc-----------ccccCcchhhhhhhccccHHHHHHhccc-chhcccc
Confidence 34444 455667777778888888999988875 1367899999999999999999999999 9999876
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
..+.+|+|-+|+..|+ .++|.+||.+.+++..+-+.|.|||+-++. .|.+++-++||.+|+|.+..-+.+.
T Consensus 923 eTNrnTaltla~fqgr---~evv~lLLa~~anvehRaktgltplme~As------gGyvdvg~~li~~gad~nasPvp~T 993 (2131)
T KOG4369|consen 923 ETNRNTALTLALFQGR---PEVVFLLLAAQANVEHRAKTGLTPLMEMAS------GGYVDVGNLLIAAGADTNASPVPNT 993 (2131)
T ss_pred ccccccceeeccccCc---chHHHHHHHHhhhhhhhcccCCcccchhhc------CCccccchhhhhcccccccCCCCCc
Confidence 7788999999999999 999999999999999999999999999987 8899999999999999965554443
Q ss_pred hhhHHHHHHhhcCCCCcc-chhcc------ccccccCCCcccccCCCcC
Q 005270 188 CDQVVYKMEEQEQPEIST-PRVLK------DGAEKKEYPVDLTLPDIKN 229 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~-~~ll~------~~~~kke~Pldlalpd~~~ 229 (705)
+.....+..+.++... +.+++ ..|+++.+++.++.-....
T Consensus 994 --~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~l 1040 (2131)
T KOG4369|consen 994 --WDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGAL 1040 (2131)
T ss_pred --CCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCcc
Confidence 2222233333333332 33333 1378888988876554433
No 89
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.60 E-value=2.5e-08 Score=108.24 Aligned_cols=67 Identities=33% Similarity=0.722 Sum_probs=59.2
Q ss_pred cccccCCCCc-cCCCCCC-CCCcccCCCccccc------c--CCcccccccCCCC---CCCCCCc-cccCCCCCCcCCCC
Q 005270 276 HYSCVPCPEF-RKGSCRQ-GDACEYAHGIFECW------L--HPAQYRTRLCKDE---TNCNRRV-CFFAHKPEELRPLY 341 (705)
Q Consensus 276 ~Y~~~~Cp~f-~kg~C~~-Gd~C~~aHg~~E~~------~--hP~~ykT~~C~~~---~~C~~~~-C~FaH~~~elr~~~ 341 (705)
.|++.+|..| ++|.|++ |+.|.|+|+..|.. . .|..|||++|..| |.|+|+. |.|+|+..|.+...
T Consensus 129 ~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~~~~~~~~~~~~~kt~lC~~f~~tG~C~yG~rC~F~H~~~~~~~~~ 208 (332)
T KOG1677|consen 129 RYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLPSSENQVGNPPKYKTKLCPKFQKTGLCKYGSRCRFIHGEPEDRASN 208 (332)
T ss_pred cccCCcceeeecCccccccCchhhhcCCcccccccccchhhcCCCCCCCcCCCccccCCCCCCCCcCeecCCCccccccc
Confidence 4899999998 4589999 99999999998887 2 3669999999999 8999976 99999999999866
Q ss_pred c
Q 005270 342 A 342 (705)
Q Consensus 342 ~ 342 (705)
.
T Consensus 209 ~ 209 (332)
T KOG1677|consen 209 R 209 (332)
T ss_pred c
Confidence 4
No 90
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.60 E-value=2.1e-08 Score=111.51 Aligned_cols=196 Identities=18% Similarity=0.165 Sum_probs=112.3
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDAS-ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
.+.+|+|++|+..|. .+++.+++..+ .++|-.--+|.. |+++. ....+..+.+..|+.+++..++.+....
T Consensus 56 ~~qR~~~~v~~~~Gs---~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~---g~s~~~~e~~~hL~~~k~~~~~tda~g~ 127 (528)
T KOG1595|consen 56 LNQRRRRPVARRDGS---FNYSPDIYCTKYDEVTGICPDGDE--HCAVL---GRSVGDTERTYHLRYYKTLPCVTDARGN 127 (528)
T ss_pred hccccccchhhhcCc---cccccceeecchhhccccCCCCcc--cchhc---ccccCCcceeEeccccccccCccccCCC
Confidence 456899999999999 89998888665 556655555555 66654 1225677888889999888866443332
Q ss_pred hhhHHHHHHhhcCCCCccchhccccccccCCCcccccCCCcCCccccc---cccccccccccCccccCCCCcccccccCC
Q 005270 188 CDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLTLPDIKNGIYGTD---EFRMYTFKVKPCSRAYSHDWTECPFVHPG 264 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~~~ll~~~~~kke~Pldlalpd~~~~~y~sd---efrm~sfKv~PCsra~shD~teCp~~hp~ 264 (705)
+-..+.+..- ..+......++...+... .+.+..+ +-....++...+...-.++-. -+|.++
T Consensus 128 ~~~~v~~~~~------------~~~~~~~r~~~~~l~e~~-~~~~~~~~e~~~~~~~~~~~y~~Dp~~pdi~--~~ys~D 192 (528)
T KOG1595|consen 128 CVKNVLHCAF------------AHGPNDLRPPVEDLLELQ-GGSGLPDDEPEVESKLDVTEYPEDPSWPDIN--GIYSSD 192 (528)
T ss_pred cccCcccccc------------cCCccccccHHHHHHhcc-cccCccCCCcccccccccccccCCCCccccc--cccccc
Confidence 2111111000 000000011111000000 0000000 000000011011100111111 233333
Q ss_pred CCccCCCCcCCcccccCCCCccCCCCCCCCCcccCC-CccccccCCcc--cccccCCCC--CCCCCCc-cccCCCCCC
Q 005270 265 ENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAH-GIFECWLHPAQ--YRTRLCKDE--TNCNRRV-CFFAHKPEE 336 (705)
Q Consensus 265 E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aH-g~~E~~~hP~~--ykT~~C~~~--~~C~~~~-C~FaH~~~e 336 (705)
+ -++|.||+++|+. +.|.+|..|.|+| |.-..+..|.+ |...+|.+| |.|.+|+ |.|||+..|
T Consensus 193 e------FrMy~fKir~C~R---~~shDwteCPf~HpgEkARRRDPRkyhYs~tpCPefrkG~C~rGD~CEyaHgvfE 261 (528)
T KOG1595|consen 193 E------FRMYSFKIRRCSR---PRSHDWTECPFAHPGEKARRRDPRKYHYSSTPCPEFRKGSCERGDSCEYAHGVFE 261 (528)
T ss_pred c------eEEEeeeecccCC---ccCCCcccCCccCCCcccccCCcccccccCccCcccccCCCCCCCccccccceeh
Confidence 3 4899999999964 4799999999999 87777778876 678899999 8999998 999999998
No 91
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.59 E-value=2e-07 Score=96.52 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=86.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCccc-CCCCCCHHHH
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSV-DAYGNRPADL 153 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~-D~~G~TPLh~ 153 (705)
.-..+|..++..|..+-...||+.- -++|.+ |..|.|+|..|++.|+ .++|++||+.|||+|.. +..+.||||+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~v-r~vn~~-D~sGMs~LahAaykGn---l~~v~lll~~gaDvN~~qhg~~YTpLmF 85 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTV-RQVNQR-DPSGMSVLAHAAYKGN---LTLVELLLELGADVNDKQHGTLYTPLMF 85 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHh-hhhhcc-CCCcccHHHHHHhcCc---HHHHHHHHHhCCCcCcccccccccHHHH
Confidence 4467899999999999999998875 679998 9999999999999999 99999999999999954 6689999999
Q ss_pred HHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 154 IAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 154 Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|+. .|+.++.++||+.|+..
T Consensus 86 AAL------SGn~dvcrllldaGa~~ 105 (396)
T KOG1710|consen 86 AAL------SGNQDVCRLLLDAGARM 105 (396)
T ss_pred HHH------cCCchHHHHHHhccCcc
Confidence 998 89999999999999987
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.56 E-value=5.8e-08 Score=105.90 Aligned_cols=93 Identities=27% Similarity=0.353 Sum_probs=82.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
+....+++||..||+..+++++. .|.|++..| .+.+|+||+||..|+++++++||+..++|++.+
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l-~g~D~~~~D-------------yD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k- 569 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFAL-QGMDLETKD-------------YDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK- 569 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHH-hcccccccc-------------cccchhheeecccCceeHHHHHHHHHcCCCChh-
Confidence 45577899999999999999888 789999887 889999999999999999999998877899887
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASA 138 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GA 138 (705)
|.+|+|||.-|...+| .+++++|-++-.
T Consensus 570 DRw~rtPlDdA~~F~h---~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 570 DRWGRTPLDDAKHFKH---KEVVKLLEEAQY 597 (622)
T ss_pred hccCCCcchHhHhcCc---HHHHHHHHHHhc
Confidence 9999999999999998 999999887643
No 93
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.56 E-value=1.9e-07 Score=103.31 Aligned_cols=122 Identities=24% Similarity=0.323 Sum_probs=105.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
..++.++..+|+-.+.+.-. .|.++-..+ .+..+.||+|+..|+-++|+|||++|+..+-...+..
T Consensus 868 eeil~av~~~D~~klqE~h~-~gg~ll~~~-------------~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~ 933 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHL-NGGSLLIQG-------------PDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADET 933 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHh-cCCceEeeC-------------cchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhh
Confidence 55899999999988888777 677776665 7889999999999999999999999965443323789
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
|.|+||-|+..++ -.+..+|+++||.+...|..|.||-.-|-+ .+..++.-+|-..
T Consensus 934 get~lhkaa~~~~---r~vc~~lvdagasl~ktd~kg~tp~eraqq------a~d~dlaayle~r 989 (1004)
T KOG0782|consen 934 GETALHKAACQRN---RAVCQLLVDAGASLRKTDSKGKTPQERAQQ------AGDPDLAAYLESR 989 (1004)
T ss_pred hhHHHHHHHHhcc---hHHHHHHHhcchhheecccCCCChHHHHHh------cCCchHHHHHhhh
Confidence 9999999999998 899999999999999999999999999877 7888888888654
No 94
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.55 E-value=4.8e-08 Score=112.04 Aligned_cols=96 Identities=23% Similarity=0.313 Sum_probs=85.5
Q ss_pred HHHHHHHhcCCC-CcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCC
Q 005270 44 GFRKAIEEDGHD-IDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGG 122 (705)
Q Consensus 44 ~v~~lL~e~Gad-vn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G 122 (705)
.++-++.+.+.+ +|.+| ..|+|+||+|+..|...++++||.+| +|++.+....|+||||-|.++|
T Consensus 32 qlk~F~~k~c~n~anikD-------------~~GR~alH~~~S~~k~~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG 97 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKD-------------RYGRTALHIAVSENKNSFLRWLLQHG-IDVFVQDEESGYTALHRAIYYG 97 (1267)
T ss_pred HHHHHHHHhhhhhhhHHH-------------hhccceeeeeeccchhHHHHHHHhcC-ceeeeccccccchHhhHhhhhc
Confidence 466666655443 55665 89999999999999999999999999 9999985567999999999999
Q ss_pred CCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 123 SANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 123 ~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
+ ++++-+||.+|+.+.++|++|..||+..++
T Consensus 98 ~---idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 98 N---IDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred h---HHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 9 999999999999999999999999999887
No 95
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.53 E-value=7.9e-08 Score=104.87 Aligned_cols=94 Identities=31% Similarity=0.386 Sum_probs=86.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCcccCCCCCCHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDA-SADVNSVDAYGNRPA 151 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~-GAdin~~D~~G~TPL 151 (705)
..++...+++||+.|.+..++.+.-.| .|++.+ |.+.+|+||+||..|+ ++++|+||+. ++|++.+|..|+|||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~-DyD~RTaLHvAAaEG~---v~v~kfl~~~~kv~~~~kDRw~rtPl 577 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQG-MDLETK-DYDDRTALHVAAAEGH---VEVVKFLLNACKVDPDPKDRWGRTPL 577 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhc-cccccc-ccccchhheeecccCc---eeHHHHHHHHHcCCCChhhccCCCcc
Confidence 456778899999999999999998888 999998 9999999999999999 9999999986 899999999999999
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCC
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Ga 177 (705)
+-|.. .++.+++++|.++-.
T Consensus 578 DdA~~------F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 578 DDAKH------FKHKEVVKLLEEAQY 597 (622)
T ss_pred hHhHh------cCcHHHHHHHHHHhc
Confidence 99987 899999999987644
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.46 E-value=4.9e-07 Score=99.15 Aligned_cols=97 Identities=22% Similarity=0.220 Sum_probs=85.7
Q ss_pred CCCCChH------HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCC
Q 005270 73 GFEERTP------LMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAY 146 (705)
Q Consensus 73 ~~~G~TP------Lh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~ 146 (705)
|.+|.|. ||-.+..|+.++.-.||..| |++|...-..|.||||.|+..|+ .--+++|+-+|||+++.|.+
T Consensus 124 DdD~~~~~~LsrQLhasvRt~nlet~LRll~lG-A~~N~~hpekg~TpLHvAAk~Gq---~~Q~ElL~vYGAD~~a~d~~ 199 (669)
T KOG0818|consen 124 DDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLG-AQANFFHPEKGNTPLHVAAKAGQ---ILQAELLAVYGADPGAQDSS 199 (669)
T ss_pred CcchhhHHHHHHHHHHHhhcccHHHHHHHHHcc-cccCCCCcccCCchhHHHHhccc---hhhhhHHhhccCCCCCCCCC
Confidence 4555554 88889999999999999999 99999866789999999999999 88899999999999999999
Q ss_pred CCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 147 GNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 147 G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|.||+++|-. .|+.++.+.|++.-.++
T Consensus 200 GmtP~~~AR~------~gH~~laeRl~e~~y~v 226 (669)
T KOG0818|consen 200 GMTPVDYARQ------GGHHELAERLVEIQYEL 226 (669)
T ss_pred CCcHHHHHHh------cCchHHHHHHHHHHHHH
Confidence 9999999987 89999998888765444
No 97
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.27 E-value=2.6e-06 Score=93.62 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=77.3
Q ss_pred HHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q 005270 32 ILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDG 111 (705)
Q Consensus 32 ~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G 111 (705)
.||..+..|+++...++|. .|+++|..+ ...|.||||+||..|+.--+++|+-+| ||++.. |.+|
T Consensus 136 QLhasvRt~nlet~LRll~-lGA~~N~~h------------pekg~TpLHvAAk~Gq~~Q~ElL~vYG-AD~~a~-d~~G 200 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLS-LGAQANFFH------------PEKGNTPLHVAAKAGQILQAELLAVYG-ADPGAQ-DSSG 200 (669)
T ss_pred HHHHHhhcccHHHHHHHHH-cccccCCCC------------cccCCchhHHHHhccchhhhhHHhhcc-CCCCCC-CCCC
Confidence 3555566788888888877 899999988 578999999999999999999999999 999998 9999
Q ss_pred ChHHHHHHhCCCCChHHHHHHHHHC
Q 005270 112 VTALHCAASGGSANSVEVVKLLLDA 136 (705)
Q Consensus 112 ~TpLH~Aa~~G~~~~~eivklLL~~ 136 (705)
.||+.+|-.+|| -++.+.|++.
T Consensus 201 mtP~~~AR~~gH---~~laeRl~e~ 222 (669)
T KOG0818|consen 201 MTPVDYARQGGH---HELAERLVEI 222 (669)
T ss_pred CcHHHHHHhcCc---hHHHHHHHHH
Confidence 999999999999 8888888765
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.25 E-value=1.1e-06 Score=61.76 Aligned_cols=28 Identities=39% Similarity=0.724 Sum_probs=13.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 005270 76 ERTPLMIASMFGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 76 G~TPLh~AA~~G~~~vVk~LL~~G~aDVn 104 (705)
|+||||+||.+|+.++|++||++| +|||
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~g-advn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHG-ADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC-CCCC
Confidence 444444444444444444444444 4443
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.23 E-value=1.5e-06 Score=62.15 Aligned_cols=32 Identities=53% Similarity=0.753 Sum_probs=20.7
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNSVD 144 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D 144 (705)
+|.||||+|+..|+ .+++++||++|++++.+|
T Consensus 1 dG~TpLh~A~~~~~---~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGH---PDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTC---HHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHH---HHHHHHHHHCcCCCCCCC
Confidence 35666666666666 666666666666666655
No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.22 E-value=3.6e-06 Score=93.98 Aligned_cols=94 Identities=30% Similarity=0.364 Sum_probs=78.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCC--CcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHD--IDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gad--vn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
.-|+.|.+..|+..+..||. +|.. +|+.. | +.+|+|+||+||..|++.+.++||-+| +|+..+ |
T Consensus 626 qqLl~A~~~~Dl~t~~lLLA-hg~~~e~~~t~---~--------~~~grt~LHLa~~~gnVvl~QLLiWyg-~dv~~r-d 691 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLA-HGSREEVNETC---G--------EGDGRTALHLAARKGNVVLAQLLIWYG-VDVMAR-D 691 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHh-ccCchhhhccc---c--------CCCCcchhhhhhhhcchhHHHHHHHhC-ccceec-c
Confidence 56788888888888877766 6654 44432 2 367899999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVN 141 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin 141 (705)
..|+|+|.||-..|. .+|+..||.+|+..+
T Consensus 692 a~g~t~l~yar~a~s---qec~d~llq~gcp~e 721 (749)
T KOG0705|consen 692 AHGRTALFYARQAGS---QECIDVLLQYGCPDE 721 (749)
T ss_pred cCCchhhhhHhhccc---HHHHHHHHHcCCCcc
Confidence 999999999999999 999999999997543
No 101
>PF13606 Ank_3: Ankyrin repeat
Probab=98.21 E-value=1.5e-06 Score=61.20 Aligned_cols=30 Identities=57% Similarity=0.832 Sum_probs=28.4
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcc
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNS 142 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~ 142 (705)
+|+||||+|+..|+ .++|++||++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~---~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGN---IEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCC---HHHHHHHHHcCCCCCC
Confidence 58999999999999 9999999999999984
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.21 E-value=3e-06 Score=94.60 Aligned_cols=91 Identities=29% Similarity=0.377 Sum_probs=78.7
Q ss_pred HHHHHHcCCHHHHHHHHHcC-CCCcccccC-CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhh
Q 005270 80 LMIASMFGSKDVVSYVIKSG-HVDVNRACG-SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKN 157 (705)
Q Consensus 80 Lh~AA~~G~~~vVk~LL~~G-~aDVn~~~d-~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~ 157 (705)
|..|+....+..+-+||.+| ...+|..|+ .+|+|+||+||..|+ +.+.++|+=+|+|+-++|.+|+|+|.||-.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gn---Vvl~QLLiWyg~dv~~rda~g~t~l~yar~- 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGN---VVLAQLLIWYGVDVMARDAHGRTALFYARQ- 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcc---hhHHHHHHHhCccceecccCCchhhhhHhh-
Confidence 56677777888889999997 234555544 467999999999999 999999999999999999999999999987
Q ss_pred CccCCCChHHHHHHHHhCCCCC
Q 005270 158 CNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 158 ~~~~~~g~~eivelLL~~Gadi 179 (705)
.+..+|+.+||.+|.-.
T Consensus 704 -----a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 704 -----AGSQECIDVLLQYGCPD 720 (749)
T ss_pred -----cccHHHHHHHHHcCCCc
Confidence 89999999999999766
No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.11 E-value=5.3e-06 Score=92.36 Aligned_cols=88 Identities=25% Similarity=0.366 Sum_probs=72.8
Q ss_pred hHHHHHHHcCCHHHHHH-HHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 78 TPLMIASMFGSKDVVSY-VIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 78 TPLh~AA~~G~~~vVk~-LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
-|||+++.....+-+.. |+..-...|+.+ |..|.||||+|+..|+ .+.+++|+.+|||+..+|++|++|||-|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~---~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGH---VEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcC---HHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 56999998877765554 333322567777 8999999999999999 999999999999999999999999999998
Q ss_pred hCccCCCChHHHHHHHHhC
Q 005270 157 NCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 157 ~~~~~~~g~~eivelLL~~ 175 (705)
.|+.+++..+|.+
T Consensus 98 ------~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 98 ------TGNEQIITEVLRH 110 (560)
T ss_pred ------cCCHHHHHHHHHH
Confidence 7888877766654
No 104
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=98.06 E-value=2.3e-06 Score=89.14 Aligned_cols=68 Identities=31% Similarity=0.642 Sum_probs=58.3
Q ss_pred cccc--cCCCCc-cCCCCCC---CCCcccC---CCccccccC--CcccccccCCCC---CCCCCCc-cccCCCCCCcCCC
Q 005270 276 HYSC--VPCPEF-RKGSCRQ---GDACEYA---HGIFECWLH--PAQYRTRLCKDE---TNCNRRV-CFFAHKPEELRPL 340 (705)
Q Consensus 276 ~Y~~--~~Cp~f-~kg~C~~---Gd~C~~a---Hg~~E~~~h--P~~ykT~~C~~~---~~C~~~~-C~FaH~~~elr~~ 340 (705)
.|++ ++|..| ++|.|++ |+.|+|+ ||.-|+-.. -..|||++|..| |+|+|+. |.|+|+..++.-+
T Consensus 225 L~kt~~~lc~~ft~kg~~p~~~sG~~~q~a~~~HGlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~ 304 (351)
T COG5063 225 LYKTNPELCESFTRKGTCPYWISGVKCQFACRGHGLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEM 304 (351)
T ss_pred hhcCCHHHhhccCcCCCCccccccccccccccccccccccccccccccccCCccchhhcccCccccccccccCChhhccc
Confidence 4777 899999 6799999 9999999 997666543 346999999999 9999975 9999999999988
Q ss_pred CcC
Q 005270 341 YAS 343 (705)
Q Consensus 341 ~~~ 343 (705)
|..
T Consensus 305 ~~~ 307 (351)
T COG5063 305 YEE 307 (351)
T ss_pred ccc
Confidence 864
No 105
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.05 E-value=5.3e-06 Score=59.31 Aligned_cols=31 Identities=35% Similarity=0.596 Sum_probs=29.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
+|+||||+|+..|+.++|++||++| +|++.+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g-a~~~~~ 31 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG-ADINAR 31 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT-SCTTCB
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc-CCCCCC
Confidence 4899999999999999999999999 999986
No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.02 E-value=2e-05 Score=92.11 Aligned_cols=125 Identities=23% Similarity=0.131 Sum_probs=102.6
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCC---CCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGH---DIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD 102 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Ga---dvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD 102 (705)
...+....+.++..||...+++.|++... ++|..| .-|+++|++|..+-+.+++++|+++. ..
T Consensus 22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d-------------~lGr~al~iai~nenle~~eLLl~~~-~~ 87 (822)
T KOG3609|consen 22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRD-------------PLGRLALHIAIDNENLELQELLLDTS-SE 87 (822)
T ss_pred cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccC-------------hHhhhceecccccccHHHHHHHhcCc-cc
Confidence 34455678999999999999999997654 455555 89999999999999999999999997 44
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCC----------cccCCCCCCHHHHHHhhCccCCCChHHHHHHH
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADV----------NSVDAYGNRPADLIAKNCNLGFNSRKKVLQAL 172 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdi----------n~~D~~G~TPLh~Aa~~~~~~~~g~~eivelL 172 (705)
+ .-+|.+|+..|. +++|++||.+-... ...-..+.|||.+||. .++.||+++|
T Consensus 88 ~--------gdALL~aI~~~~---v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh------~NnyEil~~L 150 (822)
T KOG3609|consen 88 E--------GDALLLAIAVGS---VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAH------LNNFEILQCL 150 (822)
T ss_pred c--------chHHHHHHHHHH---HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHH------hcchHHHHHH
Confidence 4 248889999998 99999999874322 1333567899999998 8999999999
Q ss_pred HhCCCCCCc
Q 005270 173 LKGSGTGCV 181 (705)
Q Consensus 173 L~~Gadi~~ 181 (705)
|++|+.+-.
T Consensus 151 l~kg~~i~~ 159 (822)
T KOG3609|consen 151 LTRGHCIPI 159 (822)
T ss_pred HHcCCCCCC
Confidence 999999844
No 107
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.89 E-value=6.1e-06 Score=95.32 Aligned_cols=77 Identities=22% Similarity=0.187 Sum_probs=69.5
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA-YGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~-~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+|.+ |..|+|+||+|+..+. .+++++||++|+|++.+|. .|+||||-|+. .|+.+|+-+||.+|+.+.+
T Consensus 45 anik-D~~GR~alH~~~S~~k---~~~l~wLlqhGidv~vqD~ESG~taLHRaiy------yG~idca~lLL~~g~SL~i 114 (1267)
T KOG0783|consen 45 ANIK-DRYGRTALHIAVSENK---NSFLRWLLQHGIDVFVQDEESGYTALHRAIY------YGNIDCASLLLSKGRSLRI 114 (1267)
T ss_pred hhHH-Hhhccceeeeeeccch---hHHHHHHHhcCceeeeccccccchHhhHhhh------hchHHHHHHHHhcCCceEE
Confidence 5666 8899999999999998 9999999999999999996 89999999987 9999999999999999977
Q ss_pred cccccchh
Q 005270 182 EEIDNLCD 189 (705)
Q Consensus 182 ~~~~~~~~ 189 (705)
.+.+.++.
T Consensus 115 ~Dkeglsp 122 (1267)
T KOG0783|consen 115 KDKEGLSP 122 (1267)
T ss_pred ecccCCCH
Confidence 77766543
No 108
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.83 E-value=3.9e-05 Score=85.66 Aligned_cols=87 Identities=24% Similarity=0.348 Sum_probs=71.9
Q ss_pred HHHHHHHhCCHHHHHHHHHhc-CCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 32 ILLELTASDDLDGFRKAIEED-GHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 32 ~LL~aAa~gd~~~v~~lL~e~-Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
++|.++...+...+.+.+... ...|+..| ..|+||||+|+..|+.+.++.|+..| +|+-.+ +..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D-------------~~g~TpLhlAV~Lg~~~~a~~Ll~a~-Adv~~k-N~~ 87 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRD-------------PPGRTPLHLAVRLGHVEAARILLSAG-ADVSIK-NNE 87 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceecccc-------------CCCCccHHHHHHhcCHHHHHHHHhcC-CCcccc-ccc
Confidence 366667777888877765533 44577776 88999999999999999999999999 999998 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHC
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDA 136 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~ 136 (705)
||++||-|+..|+ .+++..+|.+
T Consensus 88 gWs~L~EAv~~g~---~q~i~~vlr~ 110 (560)
T KOG0522|consen 88 GWSPLHEAVSTGN---EQIITEVLRH 110 (560)
T ss_pred cccHHHHHHHcCC---HHHHHHHHHH
Confidence 9999999999999 7766666544
No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.80 E-value=1.8e-05 Score=94.45 Aligned_cols=78 Identities=32% Similarity=0.441 Sum_probs=75.2
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADL 153 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~ 153 (705)
..|.|+||+|+.+|..-++++||.+| +++|.. +..|.||||.+...|+ ...+.+|+++||+.++.|.+|.+||++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~-d~~g~~plh~~~~~g~---~~~~~~ll~~~a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG-ADVNAL-DSKGRTPLHHATASGH---TSIACLLLKRGADPNAFDPDGKLPLDI 728 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC-Ccchhh-hccCCCcchhhhhhcc---cchhhhhccccccccccCccCcchhhH
Confidence 56899999999999999999999999 999998 9999999999999999 999999999999999999999999999
Q ss_pred HHh
Q 005270 154 IAK 156 (705)
Q Consensus 154 Aa~ 156 (705)
|..
T Consensus 729 a~~ 731 (785)
T KOG0521|consen 729 AME 731 (785)
T ss_pred Hhh
Confidence 987
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.67 E-value=0.00014 Score=78.28 Aligned_cols=85 Identities=28% Similarity=0.271 Sum_probs=71.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 77 RTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 77 ~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
.--|-+||..|.++.|++|++.| ++||.+ |.....||.+|+..|| .++||+||++||-...-..+|...+.-|.
T Consensus 37 f~elceacR~GD~d~v~~LVetg-vnVN~v-D~fD~spL~lAsLcGH---e~vvklLLenGAiC~rdtf~G~RC~YgaL- 110 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETG-VNVNAV-DRFDSSPLYLASLCGH---EDVVKLLLENGAICSRDTFDGDRCHYGAL- 110 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhC-CCcchh-hcccccHHHHHHHcCc---HHHHHHHHHcCCcccccccCcchhhhhhh-
Confidence 44588999999999999999999 999999 9999999999999999 99999999999977766677877654432
Q ss_pred hCccCCCChHHHHHHHHhC
Q 005270 157 NCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 157 ~~~~~~~g~~eivelLL~~ 175 (705)
+..|-++||.+
T Consensus 111 --------nd~IR~mllsy 121 (516)
T KOG0511|consen 111 --------NDRIRRMLLSY 121 (516)
T ss_pred --------hHHHHHHHHHH
Confidence 33455566654
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.52 E-value=0.00016 Score=71.64 Aligned_cols=65 Identities=32% Similarity=0.373 Sum_probs=36.5
Q ss_pred CCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 101 VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDAS-ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 101 aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
.+||.+ |..|||+|+||+..|+ -+.+.+|+.+| +++...|..|.+++.+|-+ .|..+++..|.+.
T Consensus 3 ~~in~r-D~fgWTalmcaa~eg~---~eavsyllgrg~a~vgv~d~ssldaaqlaek------~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINAR-DAFGWTALMCAAMEGS---NEAVSYLLGRGVAFVGVTDESSLDAAQLAEK------GGAQAFVHSLFEN 68 (223)
T ss_pred CCccch-hhhcchHHHHHhhhcc---hhHHHHHhccCcccccccccccchHHHHHHh------cChHHHHHHHHHH
Confidence 345554 5555555555555555 55555555555 5555555555555555554 5555555555543
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.42 E-value=0.0003 Score=69.75 Aligned_cols=68 Identities=26% Similarity=0.319 Sum_probs=60.4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA 145 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~ 145 (705)
..|+|+||.|++.|+.++|.||+.+|.++|... +..+.+++.+|-.+|. .++++.|-+.-.+-...++
T Consensus 10 ~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~-d~ssldaaqlaek~g~---~~fvh~lfe~~~ets~p~n 77 (223)
T KOG2384|consen 10 AFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVT-DESSLDAAQLAEKGGA---QAFVHSLFENDRETSHPMN 77 (223)
T ss_pred hhcchHHHHHhhhcchhHHHHHhccCccccccc-ccccchHHHHHHhcCh---HHHHHHHHHHhccCCCccc
Confidence 999999999999999999999999997788776 9999999999999999 9999999988655544443
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.26 E-value=0.00028 Score=84.45 Aligned_cols=121 Identities=23% Similarity=0.208 Sum_probs=82.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHhc-CCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 31 SILLELTASDDLDGFRKAIEED-GHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~-Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
.+|+|.++..+.+.+...|.+. |..-++.+ .+|.-.+|.+|..|..-.+..++..| ..++.+ |.
T Consensus 575 ~lllhL~a~~lyawLie~~~e~~~~~~~eld-------------~d~qgV~hfca~lg~ewA~ll~~~~~-~ai~i~-D~ 639 (975)
T KOG0520|consen 575 MLLLHLLAELLYAWLIEKVIEWAGSGDLELD-------------RDGQGVIHFCAALGYEWAFLPISADG-VAIDIR-DR 639 (975)
T ss_pred hHHHHHHHHHhHHHHHHHHhcccccCchhhc-------------ccCCChhhHhhhcCCceeEEEEeecc-cccccc-cC
Confidence 4566666666666655555543 44444443 67777777755544444444444556 888888 89
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCc------ccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVN------SVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin------~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
.||||||||+..|+ ..++..|++.|++.. ..+-.|.|+.++|.. +|+..+.-+|-++
T Consensus 640 ~G~tpL~wAa~~G~---e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s------~g~~gia~~lse~ 702 (975)
T KOG0520|consen 640 NGWTPLHWAAFRGR---EKLVASLIELGADPGAVTDPSPETPGGKTAADLARA------NGHKGIAGYLSEK 702 (975)
T ss_pred CCCcccchHhhcCH---HHHHHHHHHhccccccccCCCCCCCCCCchhhhhhc------ccccchHHHHhhh
Confidence 99999999999998 888888888776544 233468888888876 7777777777655
No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.23 E-value=0.0015 Score=70.53 Aligned_cols=85 Identities=28% Similarity=0.436 Sum_probs=67.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
+--|++|+..||.+.++.+++ .|.+||.+| .....||.+|+..||.++|++||++| |-...- ..
T Consensus 37 f~elceacR~GD~d~v~~LVe-tgvnVN~vD-------------~fD~spL~lAsLcGHe~vvklLLenG-AiC~rd-tf 100 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVE-TGVNVNAVD-------------RFDSSPLYLASLCGHEDVVKLLLENG-AICSRD-TF 100 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHH-hCCCcchhh-------------cccccHHHHHHHcCcHHHHHHHHHcC-Cccccc-cc
Confidence 567999999999999999988 999999998 78899999999999999999999999 655442 44
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDA 136 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~ 136 (705)
+|.. -||++.+ ..|=+.||.+
T Consensus 101 ~G~R-C~YgaLn-----d~IR~mllsy 121 (516)
T KOG0511|consen 101 DGDR-CHYGALN-----DRIRRMLLSY 121 (516)
T ss_pred Ccch-hhhhhhh-----HHHHHHHHHH
Confidence 5544 4555554 3344455544
No 115
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=97.07 E-value=0.00014 Score=77.28 Aligned_cols=64 Identities=31% Similarity=0.693 Sum_probs=51.0
Q ss_pred cCCCCccCCCCCCCCC-cccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCcCCCCcCCC
Q 005270 280 VPCPEFRKGSCRQGDA-CEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEELRPLYASTG 345 (705)
Q Consensus 280 ~~Cp~f~kg~C~~Gd~-C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr~~~~~~~ 345 (705)
+.|++|.++.|.+||. |.|+|...-+. -..-+-..|-++ +.|.|..|.|+|.+.+++--+.-+|
T Consensus 38 eVCReF~rn~C~R~d~~CkfaHP~~~~~--V~~g~v~aC~Ds~kgrCsR~nCkylHpp~hlkdql~ing 104 (331)
T KOG2494|consen 38 EVCREFLRNTCSRGDRECKFAHPPKNCQ--VSNGRVIACFDSQKGRCSRENCKYLHPPQHLKDQLKING 104 (331)
T ss_pred HHHHHHHhccccCCCccccccCCCCCCC--ccCCeEEEEeccccCccCcccceecCCChhhhhhhhhcc
Confidence 4899999999999998 99999966333 223455569998 8999999999999999885554443
No 116
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.05 E-value=0.00037 Score=83.40 Aligned_cols=96 Identities=20% Similarity=0.210 Sum_probs=79.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCC
Q 005270 72 MGFEERTPLMIASMFGSKDVVSYVIKS-GHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNR 149 (705)
Q Consensus 72 ~~~~G~TPLh~AA~~G~~~vVk~LL~~-G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~T 149 (705)
....|+|.||+++..+...+++.+++. + ...... +.+|...+|.++..|. +..-+|+. .|..++.+|.+|+|
T Consensus 570 ~~~r~~lllhL~a~~lyawLie~~~e~~~-~~~~el-d~d~qgV~hfca~lg~----ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 570 VNFRDMLLLHLLAELLYAWLIEKVIEWAG-SGDLEL-DRDGQGVIHFCAALGY----EWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred CCCcchHHHHHHHHHhHHHHHHHHhcccc-cCchhh-cccCCChhhHhhhcCC----ceeEEEEeecccccccccCCCCc
Confidence 357899999999999999999999986 5 333333 7788888888666664 66655554 58999999999999
Q ss_pred HHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 150 PADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 150 PLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|||||+. .|+..++..|++.|++.
T Consensus 644 pL~wAa~------~G~e~l~a~l~~lga~~ 667 (975)
T KOG0520|consen 644 PLHWAAF------RGREKLVASLIELGADP 667 (975)
T ss_pred ccchHhh------cCHHHHHHHHHHhcccc
Confidence 9999988 99999999999999888
No 117
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.02 E-value=0.0011 Score=74.48 Aligned_cols=89 Identities=22% Similarity=0.257 Sum_probs=72.2
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCC--CcccCCCCCCHHHHHHhh
Q 005270 80 LMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASAD--VNSVDAYGNRPADLIAKN 157 (705)
Q Consensus 80 Lh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAd--in~~D~~G~TPLh~Aa~~ 157 (705)
|..|+..+..--++.+-.+| -++-.+ +.+..|.||+|+..|+ -+||+|||++|-. ++..|..|.|+||-|+-
T Consensus 870 il~av~~~D~~klqE~h~~g-g~ll~~-~~~~~sllh~a~~tg~---~eivkyildh~p~elld~~de~get~lhkaa~- 943 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNG-GSLLIQ-GPDHCSLLHYAAKTGN---GEIVKYILDHGPSELLDMADETGETALHKAAC- 943 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcC-CceEee-CcchhhHHHHHHhcCC---hHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH-
Confidence 45566655543333444455 577676 8899999999999999 9999999999853 57788999999999987
Q ss_pred CccCCCChHHHHHHHHhCCCCC
Q 005270 158 CNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 158 ~~~~~~g~~eivelLL~~Gadi 179 (705)
.++..+.++|++.|+.+
T Consensus 944 -----~~~r~vc~~lvdagasl 960 (1004)
T KOG0782|consen 944 -----QRNRAVCQLLVDAGASL 960 (1004)
T ss_pred -----hcchHHHHHHHhcchhh
Confidence 78899999999999998
No 118
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=96.59 E-value=0.00042 Score=47.61 Aligned_cols=25 Identities=44% Similarity=1.027 Sum_probs=17.1
Q ss_pred ccccCCCCccC-CCCCCCCCcccCCC
Q 005270 277 YSCVPCPEFRK-GSCRQGDACEYAHG 301 (705)
Q Consensus 277 Y~~~~Cp~f~k-g~C~~Gd~C~~aHg 301 (705)
|++.+|+.|.+ |.|++|+.|.|+|+
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~ 26 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHG 26 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSS
T ss_pred CccccChhhccCCccCCCCCcCccCC
Confidence 56778887744 88888888888887
No 119
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=96.20 E-value=0.0011 Score=45.54 Aligned_cols=23 Identities=39% Similarity=0.732 Sum_probs=17.6
Q ss_pred cccccCCCC---CCCCCCc-cccCCCC
Q 005270 312 YRTRLCKDE---TNCNRRV-CFFAHKP 334 (705)
Q Consensus 312 ykT~~C~~~---~~C~~~~-C~FaH~~ 334 (705)
|||.+|+.| +.|+++. |.|+|++
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~~ 27 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHGE 27 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSSG
T ss_pred CccccChhhccCCccCCCCCcCccCCC
Confidence 789999988 8999987 9999974
No 120
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=96.10 E-value=0.0045 Score=65.22 Aligned_cols=65 Identities=20% Similarity=0.398 Sum_probs=52.0
Q ss_pred CCcccccCCCCccC-CCCCCCCCcccCCCccc---cccCC-cccccccCCCC---CCCCCC-ccccCCCCCCcC
Q 005270 274 KYHYSCVPCPEFRK-GSCRQGDACEYAHGIFE---CWLHP-AQYRTRLCKDE---TNCNRR-VCFFAHKPEELR 338 (705)
Q Consensus 274 ~y~Y~~~~Cp~f~k-g~C~~Gd~C~~aHg~~E---~~~hP-~~ykT~~C~~~---~~C~~~-~C~FaH~~~elr 338 (705)
.-.|++++|-++.+ |.|++|-.|.|.||-.+ ...|+ ..|+...|+.+ +.|+++ .|.|-|.+.-+.
T Consensus 269 ~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~~~~~~~~y~~~~crt~~~~g~~p~g~~~c~~~dkkn~~ 342 (351)
T COG5063 269 KQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEMYEEASLGYLDGPCRTRAKGGAFPSGGAVCKSFDKKNLD 342 (351)
T ss_pred ccccccCCccchhhcccCccccccccccCChhhccccccccccccccccccccccCccCCCCchhhccccchhh
Confidence 34699999999977 89999999999999754 44455 46899999987 889995 588888765443
No 121
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.09 E-value=0.0049 Score=74.14 Aligned_cols=81 Identities=25% Similarity=0.369 Sum_probs=67.1
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
+.+.+.||.++ ..+...+.++|++.|+++|..+ ..|+||||.+...|+...+..|+++| ++.+..
T Consensus 654 ~~~~s~lh~a~-~~~~~~~~e~ll~~ga~vn~~d-------------~~g~~plh~~~~~g~~~~~~~ll~~~-a~~~a~ 718 (785)
T KOG0521|consen 654 CIGCSLLHVAV-GTGDSGAVELLLQNGADVNALD-------------SKGRTPLHHATASGHTSIACLLLKRG-ADPNAF 718 (785)
T ss_pred hcccchhhhhh-ccchHHHHHHHHhcCCcchhhh-------------ccCCCcchhhhhhcccchhhhhcccc-cccccc
Confidence 34445555544 4455556677777999999998 99999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCC
Q 005270 107 CGSDGVTALHCAASGGS 123 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~ 123 (705)
+.+|.++|++|....+
T Consensus 719 -~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 719 -DPDGKLPLDIAMEAAN 734 (785)
T ss_pred -CccCcchhhHHhhhcc
Confidence 9999999999988744
No 122
>smart00356 ZnF_C3H1 zinc finger.
Probab=95.91 E-value=0.0058 Score=41.34 Aligned_cols=25 Identities=40% Similarity=0.952 Sum_probs=21.0
Q ss_pred ccccCCCCccCCCCCCCCCcccCCC
Q 005270 277 YSCVPCPEFRKGSCRQGDACEYAHG 301 (705)
Q Consensus 277 Y~~~~Cp~f~kg~C~~Gd~C~~aHg 301 (705)
|+..+|+.|.+|.|.+|+.|.|.|.
T Consensus 2 ~k~~~C~~~~~g~C~~g~~C~~~H~ 26 (27)
T smart00356 2 YKTELCKFFKRGYCPYGDRCKFAHP 26 (27)
T ss_pred CCCCcCcCccCCCCCCCCCcCCCCc
Confidence 5667898888888999999999886
No 123
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=95.69 E-value=0.0076 Score=65.62 Aligned_cols=61 Identities=36% Similarity=0.708 Sum_probs=49.3
Q ss_pred cCCCCc-cCCCCCCCCCcccCCCcc----------ccccCCcccccccCCCC---CCCCC-Cc-cccCCCCCCcCCC
Q 005270 280 VPCPEF-RKGSCRQGDACEYAHGIF----------ECWLHPAQYRTRLCKDE---TNCNR-RV-CFFAHKPEELRPL 340 (705)
Q Consensus 280 ~~Cp~f-~kg~C~~Gd~C~~aHg~~----------E~~~hP~~ykT~~C~~~---~~C~~-~~-C~FaH~~~elr~~ 340 (705)
..|-.+ +.+.|.++..|.|.|... ....-|..|||.+|+.| +.|.| +. |.|+|+.+|+|..
T Consensus 87 ~~~~~~~~~~~~~~~s~~~~~~p~~~~~~~~~~~~~~~~~p~~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~ 163 (332)
T KOG1677|consen 87 GDCSAYLRTGVCGYGSSCRYNHPDLRLRPRPVRRSRGERKPERYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLP 163 (332)
T ss_pred cccccccccCCCCCCCCCCccCcccccccCCccccccccCcccccCCcceeeecCccccccCchhhhcCCccccccc
Confidence 467666 558899999999999852 22233788999999998 89999 76 9999999999954
No 124
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.63 E-value=0.018 Score=64.46 Aligned_cols=63 Identities=27% Similarity=0.290 Sum_probs=54.0
Q ss_pred HHHHHHHHHcCCCCccccc-----CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHH
Q 005270 89 KDVVSYVIKSGHVDVNRAC-----GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIA 155 (705)
Q Consensus 89 ~~vVk~LL~~G~aDVn~~~-----d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa 155 (705)
...|++|.+++ ++.|..- +.--.|+||+|+..|. .++|.+||+.|+|+..+|..|.||..++.
T Consensus 404 p~~ie~lken~-lsgnf~~~pe~~~~ltsT~LH~aa~qg~---~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENL-LSGNFDVTPEANDYLTSTFLHYAAAQGA---RKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcC-CcccccccccccccccchHHHHHHhcch---HHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 67888998888 7776531 3346799999999999 99999999999999999999999998864
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.54 E-value=0.023 Score=36.53 Aligned_cols=24 Identities=38% Similarity=0.621 Sum_probs=11.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcC
Q 005270 76 ERTPLMIASMFGSKDVVSYVIKSG 99 (705)
Q Consensus 76 G~TPLh~AA~~G~~~vVk~LL~~G 99 (705)
|.||||+|+..++.+++++|+..+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344444444444444444444444
No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.39 E-value=0.025 Score=36.35 Aligned_cols=29 Identities=66% Similarity=0.914 Sum_probs=26.4
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCc
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVN 141 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin 141 (705)
.|.|+||+|+..++ .+++++|++.|.+++
T Consensus 1 ~~~~~l~~~~~~~~---~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGN---LEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCC---HHHHHHHHHcCCCCC
Confidence 47899999999999 999999999998875
No 127
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.89 E-value=0.048 Score=61.22 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=61.8
Q ss_pred HHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChH
Q 005270 35 ELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTA 114 (705)
Q Consensus 35 ~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~Tp 114 (705)
-....+....++++|.++++++|..- -+...+..--|+||||+..|..++|.+||+.| +|+-.+ |..|.||
T Consensus 396 s~lkk~~~p~~ie~lken~lsgnf~~-------~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~k-d~~Grtp 466 (591)
T KOG2505|consen 396 SRLKKKPEPDSIEALKENLLSGNFDV-------TPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTK-DGAGRTP 466 (591)
T ss_pred HHHhccCchhHHHHHHhcCCcccccc-------cccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhc-ccCCCCc
Confidence 33445677788888888888887653 22233455789999999999999999999999 999998 9999999
Q ss_pred HHHHH
Q 005270 115 LHCAA 119 (705)
Q Consensus 115 LH~Aa 119 (705)
..++.
T Consensus 467 y~ls~ 471 (591)
T KOG2505|consen 467 YSLSA 471 (591)
T ss_pred ccccc
Confidence 99987
No 128
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.86 E-value=0.024 Score=67.19 Aligned_cols=88 Identities=22% Similarity=0.237 Sum_probs=72.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCC---CCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHH
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGH---VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPA 151 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~---aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPL 151 (705)
.+.--...|+.+|+...|+.+++... .++|.. |.-|+++||+|+.+-+ .+++++|++++..+ ..+|
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~-d~lGr~al~iai~nen---le~~eLLl~~~~~~-------gdAL 92 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR-DPLGRLALHIAIDNEN---LELQELLLDTSSEE-------GDAL 92 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhcc-ChHhhhceeccccccc---HHHHHHHhcCcccc-------chHH
Confidence 34455788999999999999887742 467777 8899999999999998 99999999998766 2367
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
-+|+. .+..++|++||.+-...
T Consensus 93 L~aI~------~~~v~~VE~ll~~~~~~ 114 (822)
T KOG3609|consen 93 LLAIA------VGSVPLVELLLVHFVDA 114 (822)
T ss_pred HHHHH------HHHHHHHHHHHhccccc
Confidence 77777 89999999999886554
No 129
>smart00356 ZnF_C3H1 zinc finger.
Probab=93.88 E-value=0.042 Score=37.07 Aligned_cols=23 Identities=43% Similarity=0.678 Sum_probs=19.9
Q ss_pred cccccCCCC--CCCCCCc-cccCCCC
Q 005270 312 YRTRLCKDE--TNCNRRV-CFFAHKP 334 (705)
Q Consensus 312 ykT~~C~~~--~~C~~~~-C~FaH~~ 334 (705)
+|+.+|+.| |.|+++. |.|.|..
T Consensus 2 ~k~~~C~~~~~g~C~~g~~C~~~H~~ 27 (27)
T smart00356 2 YKTELCKFFKRGYCPYGDRCKFAHPL 27 (27)
T ss_pred CCCCcCcCccCCCCCCCCCcCCCCcC
Confidence 688899988 8899976 9999974
No 130
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.15 E-value=0.51 Score=48.59 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=82.2
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCcccccCC
Q 005270 33 LLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSG---HVDVNRACGS 109 (705)
Q Consensus 33 LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G---~aDVn~~~d~ 109 (705)
|-.|+..-+++.+-.++..+ ..-.++|-+|..++..+|+-+||.+- +.|+-.. .
T Consensus 157 ledAV~AsN~~~i~~~VtdK---------------------kdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~ 213 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK---------------------KDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM--E 213 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch---------------------HHHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc--C
Confidence 44555566666666555422 23467888899889999999999863 1233221 2
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCC-CCCcc---cCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDAS-ADVNS---VDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~---~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
.+.-=+-|+..... .+..|+++.|++| +++|. +-+.|.|-|+-|++ .++.+++.+||++||-.
T Consensus 214 ~~~ydieY~LS~h~-a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~K------y~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 214 KELYDIEYLLSEHS-ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMK------YKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cchhhHHHHHhhcC-CcHHHHHHHHhccccccchhhhccCCcchHHHhHHh------cCcHHHHHHHHHcCccc
Confidence 23334555555432 2388999999998 78874 45789999999998 89999999999999854
No 131
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=92.31 E-value=0.072 Score=57.89 Aligned_cols=52 Identities=29% Similarity=0.671 Sum_probs=36.2
Q ss_pred cccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC---CCCCC-CccccCCCC
Q 005270 276 HYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE---TNCNR-RVCFFAHKP 334 (705)
Q Consensus 276 ~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~---~~C~~-~~C~FaH~~ 334 (705)
.+..+.|.+|..|.|..||.|.|.|-- ++ .|.+.|..| +.|.+ ..|.|.|+.
T Consensus 74 ~~~~~vcK~~l~glC~kgD~C~Flhe~-~~------~k~rec~ff~~~g~c~~~~~c~y~h~d 129 (325)
T KOG1040|consen 74 SRGKVVCKHWLRGLCKKGDQCEFLHEY-DL------TKMRECKFFSLFGECTNGKDCPYLHGD 129 (325)
T ss_pred cCCceeehhhhhhhhhccCcCcchhhh-hh------cccccccccccccccccccCCcccCCC
Confidence 466779999999999999999999952 21 233445544 66666 346666666
No 132
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=91.31 E-value=0.13 Score=52.15 Aligned_cols=63 Identities=29% Similarity=0.703 Sum_probs=46.2
Q ss_pred cCCCCcccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC--CCCCCCcc
Q 005270 251 YSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVC 328 (705)
Q Consensus 251 ~shD~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C 328 (705)
.+-....|.|+|... ..+.||.|..|.|...+.|...|-. .|. +.-.|++| |.|+.+.|
T Consensus 217 icgkgaacrfvhept------------rkticpkflngrcnkaedcnlshel-----dpr--ripacryfllgkcnnpnc 277 (377)
T KOG1492|consen 217 ICGKGAACRFVHEPT------------RKTICPKFLNGRCNKAEDCNLSHEL-----DPR--RIPACRYFLLGKCNNPNC 277 (377)
T ss_pred cccCCceeeeecccc------------ccccChHHhcCccCchhcCCccccc-----Ccc--ccchhhhhhhccCCCCCc
Confidence 344456788887532 2358999999999999999999863 232 22248988 88999989
Q ss_pred ccCC
Q 005270 329 FFAH 332 (705)
Q Consensus 329 ~FaH 332 (705)
.|.|
T Consensus 278 ryvh 281 (377)
T KOG1492|consen 278 RYVH 281 (377)
T ss_pred eEEE
Confidence 8888
No 133
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=90.66 E-value=0.17 Score=31.93 Aligned_cols=17 Identities=41% Similarity=0.821 Sum_probs=13.8
Q ss_pred cCCCCCCCCCC-ccccCC
Q 005270 316 LCKDETNCNRR-VCFFAH 332 (705)
Q Consensus 316 ~C~~~~~C~~~-~C~FaH 332 (705)
+|+.|..|+++ .|.|.|
T Consensus 1 ~Ck~~~~C~~~~~C~f~H 18 (19)
T PF14608_consen 1 PCKFGPNCTNGDNCPFSH 18 (19)
T ss_pred CCcCcCCCCCCCcCccCC
Confidence 48878888887 688888
No 134
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=89.58 E-value=0.15 Score=57.25 Aligned_cols=60 Identities=27% Similarity=0.450 Sum_probs=40.8
Q ss_pred cccCCCCccCC---CCCCCCCcccCCCccccccC--CcccccccCCCC---CCCCCCc-cccC--CCCCCcCC
Q 005270 278 SCVPCPEFRKG---SCRQGDACEYAHGIFECWLH--PAQYRTRLCKDE---TNCNRRV-CFFA--HKPEELRP 339 (705)
Q Consensus 278 ~~~~Cp~f~kg---~C~~Gd~C~~aHg~~E~~~h--P~~ykT~~C~~~---~~C~~~~-C~Fa--H~~~elr~ 339 (705)
.-.+||....| .|.+|++|.|-|.+.-+.-- |.+- -.|.-| |.|++++ |.|+ |-..+-+.
T Consensus 75 ~n~LCPsli~g~~~~C~f~d~Crf~HDi~ayLatK~~Dig--~~Cp~f~s~G~Cp~G~~CRFl~aHld~~g~~ 145 (614)
T KOG2333|consen 75 QNRLCPSLIQGDISKCSFGDNCRFVHDIEAYLATKAPDIG--PSCPVFESLGFCPYGFKCRFLGAHLDIEGNN 145 (614)
T ss_pred hhccChHhhcCCCccCcccccccccccHHHHHhccCcccC--CccceeeccccCCccceeehhhcccCccccc
Confidence 34599988554 89999999999995443321 3222 127655 9999998 9995 55444443
No 135
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=88.45 E-value=0.6 Score=54.36 Aligned_cols=91 Identities=24% Similarity=0.481 Sum_probs=48.3
Q ss_pred cccccCccccCCCCcccccccCCCCc-cCCCCcCCcccccCCCCccCCCCCCC-----CCcccCCCccc--ccc--CCcc
Q 005270 242 FKVKPCSRAYSHDWTECPFVHPGENA-RRRDPRKYHYSCVPCPEFRKGSCRQG-----DACEYAHGIFE--CWL--HPAQ 311 (705)
Q Consensus 242 fKv~PCsra~shD~teCp~~hp~E~~-RRRdPr~y~Y~~~~Cp~f~kg~C~~G-----d~C~~aHg~~E--~~~--hP~~ 311 (705)
+.+..|.....-...+|.|+|+.--. ..-.|.. --...|-... -.|+.| ..|.|.|+.-. ..+ -|..
T Consensus 542 k~l~~Cky~~~Ct~a~Ce~~HPtaa~~~~s~p~k--~fa~~~~ks~-p~Ck~~~kCtasDC~~sH~~~~~pvq~t~ip~~ 618 (681)
T KOG3702|consen 542 KILTRCKYGPACTSAECEFAHPTAAENAKSLPNK--KFASKCLKSH-PGCKFGKKCTASDCNYSHAGRRIPVQPTRIPPP 618 (681)
T ss_pred eeeccccCCCcCCchhhhhcCCcchhhhhccccc--cccccceecc-cccccccccccccCcccccCCCCCCccccCCCC
Confidence 33445665554456778888874310 0011110 0001111111 135555 46889998533 111 1223
Q ss_pred c----ccccCCCCCCCCCCccccCCCCC
Q 005270 312 Y----RTRLCKDETNCNRRVCFFAHKPE 335 (705)
Q Consensus 312 y----kT~~C~~~~~C~~~~C~FaH~~~ 335 (705)
+ -+.+|+++++|+...|.|.|=..
T Consensus 619 ~~~~ti~~~CrY~pnCrnm~C~F~HPk~ 646 (681)
T KOG3702|consen 619 FPGGTIRGLCRYRPNCRNMQCKFYHPKT 646 (681)
T ss_pred CCCCCccccceeccCcCCccccccCCcc
Confidence 3 35679999999999999999543
No 136
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=82.24 E-value=1 Score=28.41 Aligned_cols=19 Identities=37% Similarity=0.945 Sum_probs=15.3
Q ss_pred CCCCccCCCCCCCCCcccCCC
Q 005270 281 PCPEFRKGSCRQGDACEYAHG 301 (705)
Q Consensus 281 ~Cp~f~kg~C~~Gd~C~~aHg 301 (705)
+|..+.. |++++.|.|.|.
T Consensus 1 ~Ck~~~~--C~~~~~C~f~HP 19 (19)
T PF14608_consen 1 PCKFGPN--CTNGDNCPFSHP 19 (19)
T ss_pred CCcCcCC--CCCCCcCccCCc
Confidence 4776655 999999999994
No 137
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=81.64 E-value=1.3 Score=47.31 Aligned_cols=52 Identities=27% Similarity=0.541 Sum_probs=43.0
Q ss_pred cccccCCCCccCCCCCCCCCcccCCCccccccCCcccc--cccCCCC---CCCCCC-ccccCCCC
Q 005270 276 HYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYR--TRLCKDE---TNCNRR-VCFFAHKP 334 (705)
Q Consensus 276 ~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~yk--T~~C~~~---~~C~~~-~C~FaH~~ 334 (705)
.+..+.|+.|..|.|+.+..|.|.|+.- +.+ +-.|+.| |.|..+ .|.+.|..
T Consensus 101 ~~s~V~c~~~~~g~c~s~~~c~~lh~~d-------~~~s~~~~c~~Fs~~G~cs~g~~c~~~h~d 158 (285)
T COG5084 101 LSSSVVCKFFLRGLCKSGFSCEFLHEYD-------LRSSQGPPCRSFSLKGSCSSGPSCGYSHID 158 (285)
T ss_pred ccCCcccchhccccCcCCCccccccCCC-------cccccCCCcccccccceeccCCCCCccccC
Confidence 6888899999999999999999999931 222 5569988 889995 49999985
No 138
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=79.34 E-value=0.27 Score=51.95 Aligned_cols=27 Identities=33% Similarity=0.926 Sum_probs=23.6
Q ss_pred ccccCCCCccCCCCCCCCCcccCCCcc
Q 005270 277 YSCVPCPEFRKGSCRQGDACEYAHGIF 303 (705)
Q Consensus 277 Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~ 303 (705)
=+++.|-.|..|.|..|+.|.|+|+..
T Consensus 90 PKSvvCafFk~g~C~KG~kCKFsHdl~ 116 (343)
T KOG1763|consen 90 PKSVVCAFFKQGTCTKGDKCKFSHDLA 116 (343)
T ss_pred chHHHHHHHhccCCCCCCcccccchHH
Confidence 356699999999999999999999963
No 139
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=78.19 E-value=0.32 Score=49.86 Aligned_cols=60 Identities=33% Similarity=0.615 Sum_probs=42.7
Q ss_pred ccccCCCCccCCCCCCCCCcccCCCcccccc--CCc-------------------ccccccCCCC------------CCC
Q 005270 277 YSCVPCPEFRKGSCRQGDACEYAHGIFECWL--HPA-------------------QYRTRLCKDE------------TNC 323 (705)
Q Consensus 277 Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~--hP~-------------------~ykT~~C~~~------------~~C 323 (705)
=+++.|--|..+.|..|+.|.|+|+..|..- .|. +.-.+.|++| =.|
T Consensus 83 pK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~eK~DLYsDvRd~~ed~pl~krP~intd~VCkffieA~e~GkYgw~W~C 162 (299)
T COG5252 83 PKTVVCALFLNKTCAKGDACKFAHGKEEARKTEKPDLYSDVRDKEEDVPLGKRPWINTDRVCKFFIEAMESGKYGWGWTC 162 (299)
T ss_pred chhHHHHHhccCccccCchhhhhcchHHHhhhcccchhhhhhhhhccCCcccCCCCChhHHHHHHHHHHhcCCccceeeC
Confidence 4567899999999999999999999655432 122 2233457765 249
Q ss_pred CCC--ccccCCCCCC
Q 005270 324 NRR--VCFFAHKPEE 336 (705)
Q Consensus 324 ~~~--~C~FaH~~~e 336 (705)
+.+ .|.|.|..-+
T Consensus 163 Png~~~C~y~H~Lp~ 177 (299)
T COG5252 163 PNGNMRCSYIHKLPD 177 (299)
T ss_pred CCCCceeeeeeccCc
Confidence 997 4999997655
No 140
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=77.81 E-value=1.5 Score=47.25 Aligned_cols=54 Identities=31% Similarity=0.647 Sum_probs=37.4
Q ss_pred cccccCccccCCCCcccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCcccc
Q 005270 242 FKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFEC 305 (705)
Q Consensus 242 fKv~PCsra~shD~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~ 305 (705)
|.-.-|.|.- .+|.|+|+.++ +..-.-+..-|-++.||.|.+ ++|.|.|..-+.
T Consensus 43 F~rn~C~R~d----~~CkfaHP~~~-----~~V~~g~v~aC~Ds~kgrCsR-~nCkylHpp~hl 96 (331)
T KOG2494|consen 43 FLRNTCSRGD----RECKFAHPPKN-----CQVSNGRVIACFDSQKGRCSR-ENCKYLHPPQHL 96 (331)
T ss_pred HHhccccCCC----ccccccCCCCC-----CCccCCeEEEEeccccCccCc-ccceecCCChhh
Confidence 3344455433 45999999764 333334445899999999999 569999997654
No 141
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=73.83 E-value=1.9 Score=43.91 Aligned_cols=53 Identities=28% Similarity=0.642 Sum_probs=41.4
Q ss_pred ccCCCCc-cCCCCCCCCCcccCCCccccccCCcccccccCCCC--CCCCCC-ccccCCCCCCcCCC
Q 005270 279 CVPCPEF-RKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRR-VCFFAHKPEELRPL 340 (705)
Q Consensus 279 ~~~Cp~f-~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~-~C~FaH~~~elr~~ 340 (705)
.+.|+.+ ..|.|-.|..|.|.|-. .+...|..| |.|+.. +|...|..+..|-+
T Consensus 206 avycryynangicgkgaacrfvhep---------trkticpkflngrcnkaedcnlsheldprrip 262 (377)
T KOG1492|consen 206 AVYCRYYNANGICGKGAACRFVHEP---------TRKTICPKFLNGRCNKAEDCNLSHELDPRRIP 262 (377)
T ss_pred eeEEEEecCCCcccCCceeeeeccc---------cccccChHHhcCccCchhcCCcccccCccccc
Confidence 4578887 55899999999999872 233468888 899995 69999988887643
No 142
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=72.06 E-value=2.9 Score=45.72 Aligned_cols=77 Identities=29% Similarity=0.508 Sum_probs=49.0
Q ss_pred CccccCCCCcccccccCCCCccCCCCcCCccccc-CCCCc-cCCCCCCCCCcccCCCccccccCCcccccccCCCC--CC
Q 005270 247 CSRAYSHDWTECPFVHPGENARRRDPRKYHYSCV-PCPEF-RKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE--TN 322 (705)
Q Consensus 247 Csra~shD~teCp~~hp~E~~RRRdPr~y~Y~~~-~Cp~f-~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~--~~ 322 (705)
..+..+.-.++|.|.|..+ +... .|-.| ..|-|.+|..|.|-|+.+ ..+-+.|+-+ +.
T Consensus 83 ~l~glC~kgD~C~Flhe~~-----------~~k~rec~ff~~~g~c~~~~~c~y~h~dp-------qt~~k~c~~~~~g~ 144 (325)
T KOG1040|consen 83 WLRGLCKKGDQCEFLHEYD-----------LTKMRECKFFSLFGECTNGKDCPYLHGDP-------QTAIKKCKWYKEGF 144 (325)
T ss_pred hhhhhhhccCcCcchhhhh-----------hcccccccccccccccccccCCcccCCCh-------hhhhhccchhhhcc
Confidence 3456666677888888642 1111 45555 447788889999999865 3444557655 77
Q ss_pred CCCCc-cccCCCCCCcCCCC
Q 005270 323 CNRRV-CFFAHKPEELRPLY 341 (705)
Q Consensus 323 C~~~~-C~FaH~~~elr~~~ 341 (705)
|+.+- |.+.|-...+-+.|
T Consensus 145 c~~g~~c~~~h~~~~~c~~y 164 (325)
T KOG1040|consen 145 CRGGPSCKKRHERKVLCPPY 164 (325)
T ss_pred CCCcchhhhhhhcccCCCch
Confidence 77754 88888776444433
No 143
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=70.85 E-value=7 Score=40.53 Aligned_cols=93 Identities=22% Similarity=0.202 Sum_probs=61.4
Q ss_pred HHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHH--cCCHHHHHHHHHcCCCCcccc--cCC
Q 005270 34 LELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASM--FGSKDVVSYVIKSGHVDVNRA--CGS 109 (705)
Q Consensus 34 L~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~--~G~~~vVk~LL~~G~aDVn~~--~d~ 109 (705)
+..+.....+.+..+|.. .......|+ -.| ..+.--+-|+.. ..+..|++++|++|-++||.+ .-.
T Consensus 183 m~~si~~~K~dva~~lls-~f~ft~~dv--------~~~-~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~N 252 (284)
T PF06128_consen 183 MWLSIGNAKEDVALYLLS-KFNFTKQDV--------ASM-EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVN 252 (284)
T ss_pred HHHHhcccHHHHHHHHHh-hcceecchh--------hhc-CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccC
Confidence 344445566666666662 333333330 011 112223445443 246789999999998899864 245
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASAD 139 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAd 139 (705)
.|.|-|--|..+++ .+++.+||++||-
T Consensus 253 SGdtMLDNA~Ky~~---~emi~~Llk~GA~ 279 (284)
T PF06128_consen 253 SGDTMLDNAMKYKN---SEMIAFLLKYGAI 279 (284)
T ss_pred CcchHHHhHHhcCc---HHHHHHHHHcCcc
Confidence 79999999999999 9999999999984
No 144
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=66.04 E-value=2.9 Score=46.34 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=21.1
Q ss_pred cccCCcccccccCCCC--CCCCCCc-cccCCCCC
Q 005270 305 CWLHPAQYRTRLCKDE--TNCNRRV-CFFAHKPE 335 (705)
Q Consensus 305 ~~~hP~~ykT~~C~~~--~~C~~~~-C~FaH~~~ 335 (705)
+.+||..-...+|++| +.|+.+- |.|-||..
T Consensus 131 lfl~PTh~sMkpC~ffLeg~CRF~enCRfSHG~~ 164 (486)
T KOG2185|consen 131 LFLTPTHESMKPCKFFLEGRCRFGENCRFSHGLD 164 (486)
T ss_pred EeecCcchhhccchHhhccccccCcccccccCcc
Confidence 3446777777777777 7777754 77777653
No 145
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=65.18 E-value=2.8 Score=42.22 Aligned_cols=33 Identities=24% Similarity=0.552 Sum_probs=27.6
Q ss_pred CCcCCcccccCCCCc-cCCCCCCCCCcccCCCcc
Q 005270 271 DPRKYHYSCVPCPEF-RKGSCRQGDACEYAHGIF 303 (705)
Q Consensus 271 dPr~y~Y~~~~Cp~f-~kg~C~~Gd~C~~aHg~~ 303 (705)
+-..+.|.+..|.+| .+|-|-|||.|.|.|.+.
T Consensus 133 ~~~viD~qpdVCKdyk~TGYCGYGDsCKflH~R~ 166 (259)
T COG5152 133 DGEVIDTQPDVCKDYKETGYCGYGDSCKFLHDRS 166 (259)
T ss_pred ccceeecCcccccchhhcccccCCchhhhhhhhh
Confidence 344566888899998 569999999999999975
No 146
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=62.03 E-value=6.5 Score=44.43 Aligned_cols=72 Identities=26% Similarity=0.492 Sum_probs=47.0
Q ss_pred CCcccccccCCCCccCCCCcCCcccccCCCCccC-CCCCCCCCcccCCCccccccCCcccccccCCCC---CCCCCCccc
Q 005270 254 DWTECPFVHPGENARRRDPRKYHYSCVPCPEFRK-GSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE---TNCNRRVCF 329 (705)
Q Consensus 254 D~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~k-g~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~---~~C~~~~C~ 329 (705)
....|+|-|.. .++ -.-..|..|.. ..|+. .|.|.|+.|... ..-++|-.+ ..|....|-
T Consensus 16 k~d~c~~rh~E-~al--------~n~t~C~~w~~~~~C~k--~C~YRHSe~~~k-----r~e~~CYwe~~p~gC~k~~Cg 79 (667)
T KOG4791|consen 16 KGDSCPFRHCE-AAL--------GNETVCTLWQEGRCCRK--VCRYRHSEIDKK-----RSEIPCYWENQPTGCQKLNCG 79 (667)
T ss_pred ccCcCcchhhH-HHh--------cCcchhhhhhhcCcccc--cccchhhHHhhh-----cCcccceeecCCCccCCCccc
Confidence 34567777752 111 12236777744 35776 999999966554 344678766 459999999
Q ss_pred cCCCCCCcCCCC
Q 005270 330 FAHKPEELRPLY 341 (705)
Q Consensus 330 FaH~~~elr~~~ 341 (705)
|-|+--.|-.+-
T Consensus 80 fRH~~pPLkg~l 91 (667)
T KOG4791|consen 80 FRHNRPPLKGVL 91 (667)
T ss_pred cccCCCchhhhc
Confidence 999876655443
No 147
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=61.16 E-value=5 Score=44.52 Aligned_cols=21 Identities=48% Similarity=1.273 Sum_probs=17.2
Q ss_pred CCCCccCCCCCCCCCcccCCC
Q 005270 281 PCPEFRKGSCRQGDACEYAHG 301 (705)
Q Consensus 281 ~Cp~f~kg~C~~Gd~C~~aHg 301 (705)
+|++|-.|.|+.+..|.|.||
T Consensus 142 pC~ffLeg~CRF~enCRfSHG 162 (486)
T KOG2185|consen 142 PCKFFLEGRCRFGENCRFSHG 162 (486)
T ss_pred cchHhhccccccCcccccccC
Confidence 788887788888888888887
No 148
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=57.89 E-value=4.5 Score=43.20 Aligned_cols=34 Identities=24% Similarity=0.641 Sum_probs=28.2
Q ss_pred CcCCcccccCCCCc-cCCCCCCCCCcccCCCcccc
Q 005270 272 PRKYHYSCVPCPEF-RKGSCRQGDACEYAHGIFEC 305 (705)
Q Consensus 272 Pr~y~Y~~~~Cp~f-~kg~C~~Gd~C~~aHg~~E~ 305 (705)
-..+.|-+..|.++ .+|-|-+||.|.|.|.+..+
T Consensus 179 ~~~~d~qpDicKdykeTgycg~gdSckFlh~r~Dy 213 (313)
T KOG1813|consen 179 GERIDYQPDICKDYKETGYCGYGDSCKFLHDRSDY 213 (313)
T ss_pred cceeecCchhhhhhHhhCcccccchhhhhhhhhhc
Confidence 34567889999999 66999999999999987533
No 149
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=55.16 E-value=59 Score=32.92 Aligned_cols=45 Identities=22% Similarity=0.254 Sum_probs=32.9
Q ss_pred HHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 115 LHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 115 LH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
|.+|+..|- ...+.-.|++|.+++. ++|..|+. .++.+|+.+++.
T Consensus 147 l~~a~~kgl---l~F~letlkygg~~~~------~vls~Av~------ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGL---LPFVLETLKYGGNVDI------IVLSQAVK------YNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCC---HHHHHHHHHcCCcccH------HHHHHHHH------hhHHHHHHHhhc
Confidence 456777777 7777777788777653 67777777 777788777764
No 150
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=55.07 E-value=21 Score=30.27 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=39.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHC
Q 005270 77 RTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDA 136 (705)
Q Consensus 77 ~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~ 136 (705)
...|..|+..|+.++++.+++.+ .++ ...|..|+...+ -+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~--~~~-------~~~l~~AI~~H~---n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN--KPD-------NDCLEYAIKSHN---NEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh--ccH-------HHHHHHHHHHhh---HHHHHHHHHh
Confidence 35689999999999999998765 121 346899999888 9999999976
No 151
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=54.79 E-value=18 Score=30.79 Aligned_cols=47 Identities=19% Similarity=0.359 Sum_probs=38.1
Q ss_pred hHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 113 TALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 113 TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
.-|.+|+.+|+ .|+++.+++.+ .++ ...+..|+. ..+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN---~eII~~c~~~~-~~~------~~~l~~AI~------~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGN---FEIINICLKKN-KPD------NDCLEYAIK------SHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCC---HHHHHHHHHHh-ccH------HHHHHHHHH------HhhHHHHHHHHHh
Confidence 46899999999 99999999765 222 346888888 7788999999886
No 152
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=39.61 E-value=2.4e+02 Score=30.54 Aligned_cols=52 Identities=33% Similarity=0.719 Sum_probs=37.5
Q ss_pred ccCCCCc-cCCCCCCCCCcccCCCccccccCCcccccccCCC-----CCCCCCCc-cccCCCCCCc
Q 005270 279 CVPCPEF-RKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKD-----ETNCNRRV-CFFAHKPEEL 337 (705)
Q Consensus 279 ~~~Cp~f-~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~-----~~~C~~~~-C~FaH~~~el 337 (705)
...|..| .+|.|..|..|.|.|.- |.... ..|.. .+.|+.+- |.|-|+..-+
T Consensus 134 ~~~c~~Fs~~G~cs~g~~c~~~h~d------p~~~~-~~~~~~~~~~~~f~p~g~~c~~~H~~~~~ 192 (285)
T COG5084 134 GPPCRSFSLKGSCSSGPSCGYSHID------PDSFA-GNCDQYSGATYGFCPLGASCKFSHTLKRV 192 (285)
T ss_pred CCCcccccccceeccCCCCCccccC------ccccc-ccccccCcccccccCCCCccccccccccc
Confidence 5589999 78999999999999994 22111 12443 35688865 9999987643
No 153
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=37.52 E-value=40 Score=39.90 Aligned_cols=47 Identities=21% Similarity=0.424 Sum_probs=31.2
Q ss_pred CCCCCCcccCCCccc--cccC-------CcccccccCCCCCCCCCCccccCCCCCCc
Q 005270 290 CRQGDACEYAHGIFE--CWLH-------PAQYRTRLCKDETNCNRRVCFFAHKPEEL 337 (705)
Q Consensus 290 C~~Gd~C~~aHg~~E--~~~h-------P~~ykT~~C~~~~~C~~~~C~FaH~~~el 337 (705)
|. +..|+|+|.... +.-- +..|--..|+....|...+|.|.|...-+
T Consensus 553 Ct-~a~Ce~~HPtaa~~~~s~p~k~fa~~~~ks~p~Ck~~~kCtasDC~~sH~~~~~ 608 (681)
T KOG3702|consen 553 CT-SAECEFAHPTAAENAKSLPNKKFASKCLKSHPGCKFGKKCTASDCNYSHAGRRI 608 (681)
T ss_pred CC-chhhhhcCCcchhhhhccccccccccceecccccccccccccccCcccccCCCC
Confidence 44 456777777544 3221 22344445888889999999999987665
No 154
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.39 E-value=12 Score=42.43 Aligned_cols=51 Identities=25% Similarity=0.560 Sum_probs=32.3
Q ss_pred CCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCc
Q 005270 281 PCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEEL 337 (705)
Q Consensus 281 ~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~el 337 (705)
-|..|....|+.++.|.|.|.---+. -..-|.+| +.|-+.+|.|-|+...+
T Consensus 5 dcyff~ys~cKk~d~c~~rh~E~al~------n~t~C~~w~~~~~C~k~C~YRHSe~~~ 57 (667)
T KOG4791|consen 5 DCYFFFYSTCKKGDSCPFRHCEAALG------NETVCTLWQEGRCCRKVCRYRHSEIDK 57 (667)
T ss_pred cchhhhhhhhhccCcCcchhhHHHhc------CcchhhhhhhcCcccccccchhhHHhh
Confidence 46666556799999999999832221 11237776 44445578887766543
No 155
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=29.50 E-value=1.1e+02 Score=36.30 Aligned_cols=16 Identities=31% Similarity=0.702 Sum_probs=8.3
Q ss_pred cccccCCC-C-CCCCCCc
Q 005270 312 YRTRLCKD-E-TNCNRRV 327 (705)
Q Consensus 312 ykT~~C~~-~-~~C~~~~ 327 (705)
+||+-|.+ | ..|...+
T Consensus 204 frC~~C~~KfHq~Cs~~v 221 (678)
T KOG0193|consen 204 FRCQTCGYKFHQSCSPRV 221 (678)
T ss_pred cccCCCCCccccccCCCC
Confidence 35555665 2 5565543
No 156
>PF10650 zf-C3H1: Putative zinc-finger domain; InterPro: IPR019607 This domain is conserved in fungi and might be a zinc-finger domain as it contains three conserved Cs and an H in the C-x8-C-x5-C-x3-H conformation typical of a zinc-finger.
Probab=28.17 E-value=33 Score=22.97 Aligned_cols=17 Identities=47% Similarity=0.862 Sum_probs=10.2
Q ss_pred cCCCC---CCCCCCccccCC
Q 005270 316 LCKDE---TNCNRRVCFFAH 332 (705)
Q Consensus 316 ~C~~~---~~C~~~~C~FaH 332 (705)
+|.+. |.|+...|.|-|
T Consensus 2 lC~yEl~Gg~Cnd~~C~~QH 21 (23)
T PF10650_consen 2 LCPYELTGGVCNDPDCEFQH 21 (23)
T ss_pred CCccccCCCeeCCCCCCccc
Confidence 35544 367666677666
No 157
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=26.97 E-value=25 Score=38.84 Aligned_cols=24 Identities=33% Similarity=0.875 Sum_probs=22.3
Q ss_pred cCCCCccCCCCCCCCCcccCCCcc
Q 005270 280 VPCPEFRKGSCRQGDACEYAHGIF 303 (705)
Q Consensus 280 ~~Cp~f~kg~C~~Gd~C~~aHg~~ 303 (705)
+.|.++.+|.|++|+.|.|.|...
T Consensus 9 tic~~~~~g~c~~g~~cr~~h~~~ 32 (344)
T KOG1039|consen 9 TICKYYQKGNCKFGDLCRLSHSLP 32 (344)
T ss_pred hhhhhcccccccccceeeeeccCc
Confidence 689999999999999999999965
No 158
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=26.31 E-value=1.1e+02 Score=31.05 Aligned_cols=45 Identities=20% Similarity=0.201 Sum_probs=37.8
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHH
Q 005270 80 LMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLD 135 (705)
Q Consensus 80 Lh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~ 135 (705)
|..|+..|-..+|...|++| -+++ .++|-.|+.+.+ -.++.+++.
T Consensus 147 l~~a~~kgll~F~letlkyg-g~~~-------~~vls~Av~ynh---RkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYG-GNVD-------IIVLSQAVKYNH---RKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcC-Cccc-------HHHHHHHHHhhH---HHHHHHhhc
Confidence 56799999999999999999 4444 379999999998 888888764
No 159
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=24.70 E-value=32 Score=34.94 Aligned_cols=23 Identities=30% Similarity=0.716 Sum_probs=19.3
Q ss_pred cCCCC---CCCCCCc-cccCCCCCCcC
Q 005270 316 LCKDE---TNCNRRV-CFFAHKPEELR 338 (705)
Q Consensus 316 ~C~~~---~~C~~~~-C~FaH~~~elr 338 (705)
.|++| |+|-|+. |.|.|.-++..
T Consensus 143 VCKdyk~TGYCGYGDsCKflH~R~D~K 169 (259)
T COG5152 143 VCKDYKETGYCGYGDSCKFLHDRSDFK 169 (259)
T ss_pred cccchhhcccccCCchhhhhhhhhhhh
Confidence 48888 9999998 99999877644
No 160
>KOG4786 consensus Ubinuclein, nuclear protein interacting with cellular and viral transcription factors [Transcription; Signal transduction mechanisms]
Probab=24.17 E-value=6.3e+02 Score=30.78 Aligned_cols=31 Identities=29% Similarity=0.522 Sum_probs=16.4
Q ss_pred CCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCC
Q 005270 381 TSTPPLTPSGASSPMGGT---MWNQPNIAPPTLQ 411 (705)
Q Consensus 381 ~~~~p~~p~~~~~~~~~~---~~~~~~~~~p~l~ 411 (705)
-..||--|-+.++..+++ ..+.+.+.||++-
T Consensus 968 ~~~P~~~P~~~sS~~s~GV~~~~~~~~~~P~~V~ 1001 (1136)
T KOG4786|consen 968 QRHPHQNPQIATSSSSGGVNQFYNNGGAAPPVVE 1001 (1136)
T ss_pred ccCCCCCCCccccCCchhHHHHhcCCCCCCchhh
Confidence 345566676655544443 2355555565544
No 161
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=22.94 E-value=17 Score=37.81 Aligned_cols=29 Identities=34% Similarity=0.534 Sum_probs=24.5
Q ss_pred cccccCCCC--CCCCCCc-cccCCCCCCcCCC
Q 005270 312 YRTRLCKDE--TNCNRRV-CFFAHKPEELRPL 340 (705)
Q Consensus 312 ykT~~C~~~--~~C~~~~-C~FaH~~~elr~~ 340 (705)
-||..|--| +.|..+. |.|+|+.+|.|..
T Consensus 83 pK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~ 114 (299)
T COG5252 83 PKTVVCALFLNKTCAKGDACKFAHGKEEARKT 114 (299)
T ss_pred chhHHHHHhccCccccCchhhhhcchHHHhhh
Confidence 378888888 7898887 9999999998854
No 162
>KOG0153 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=21.76 E-value=53 Score=36.12 Aligned_cols=26 Identities=35% Similarity=0.700 Sum_probs=21.9
Q ss_pred cccCCCCccCCCCCCCCCcccCCCcc
Q 005270 278 SCVPCPEFRKGSCRQGDACEYAHGIF 303 (705)
Q Consensus 278 ~~~~Cp~f~kg~C~~Gd~C~~aHg~~ 303 (705)
....|..|.+|.|++|+.|.|-|-..
T Consensus 160 ~p~Icsf~v~geckRG~ec~yrhEkp 185 (377)
T KOG0153|consen 160 RPHICSFFVKGECKRGAECPYRHEKP 185 (377)
T ss_pred CCccccceeeccccccccccccccCC
Confidence 34488889999999999999999754
No 163
>KOG3777 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.73 E-value=2.5e+02 Score=32.31 Aligned_cols=32 Identities=28% Similarity=0.650 Sum_probs=25.8
Q ss_pred CCCCcCCcccccCCCCccCCCCCCCCCcccCCCc
Q 005270 269 RRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGI 302 (705)
Q Consensus 269 RRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~ 302 (705)
+..|..+.+....||.-++ |.+|.+|.|-|..
T Consensus 161 ~k~p~~~aq~~q~Cpygkk--ctyg~kck~~h~~ 192 (443)
T KOG3777|consen 161 SKKPLLWAQNKQPCPYGKK--CTYGGKCKFYHPE 192 (443)
T ss_pred hhccchhhhcccCCCcccc--cCCCCceeecccc
Confidence 3446667788889998888 9999999998874
Done!