Query 005270
Match_columns 705
No_of_seqs 505 out of 2622
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 20:28:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 8.7E-23 3E-27 198.2 16.7 128 31-183 6-133 (169)
2 4gpm_A Engineered protein OR26 99.9 7.7E-23 2.6E-27 198.5 16.2 127 28-179 36-162 (169)
3 3f6q_A Integrin-linked protein 99.9 4E-21 1.4E-25 185.0 16.7 127 29-179 5-131 (179)
4 2jab_A H10-2-G3; HER2, darpin, 99.9 4.7E-21 1.6E-25 176.9 15.7 124 28-176 13-136 (136)
5 3twr_A Tankyrase-2; ankyrin re 99.9 5.4E-21 1.9E-25 181.2 16.3 127 29-179 8-134 (165)
6 1d9s_A Cyclin-dependent kinase 99.9 1E-21 3.4E-26 181.4 9.7 125 28-178 11-136 (136)
7 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.1E-20 3.8E-25 169.3 15.5 125 29-178 2-126 (126)
8 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.1E-20 1.1E-24 177.4 17.9 129 28-181 13-141 (169)
9 1bi7_B P16INK4A, MTS1, multipl 99.8 3.2E-21 1.1E-25 182.2 9.4 131 26-182 9-140 (156)
10 3v31_A Ankyrin repeat family A 99.8 2.6E-20 8.8E-25 176.8 15.5 129 29-182 3-131 (167)
11 4b93_B Ankyrin repeat domain-c 99.8 2.2E-20 7.5E-25 193.8 15.6 129 29-181 52-180 (269)
12 1awc_B Protein (GA binding pro 99.8 5.1E-20 1.8E-24 172.8 16.5 126 30-181 3-128 (153)
13 3v30_A DNA-binding protein rfx 99.8 2.9E-20 9.9E-25 177.4 14.9 129 30-182 3-131 (172)
14 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.2E-20 4.2E-25 177.6 11.8 125 29-179 5-129 (162)
15 2rfa_A Transient receptor pote 99.8 1.5E-20 5.2E-25 187.3 13.1 131 29-183 3-151 (232)
16 2vge_A RELA-associated inhibit 99.8 1.4E-20 4.8E-25 190.6 11.9 132 27-183 19-153 (229)
17 1oy3_D Transcription factor in 99.8 1.5E-20 5.1E-25 191.7 11.8 194 28-249 8-264 (282)
18 2rfm_A Putative ankyrin repeat 99.8 4.8E-20 1.6E-24 179.2 14.4 131 27-182 33-163 (192)
19 1s70_B 130 kDa myosin-binding 99.8 7.4E-20 2.5E-24 189.1 16.3 171 27-226 38-275 (299)
20 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.8E-20 1.6E-24 173.6 13.3 125 28-178 37-162 (162)
21 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.4E-19 4.6E-24 173.0 16.1 124 28-176 46-169 (169)
22 3v30_A DNA-binding protein rfx 99.8 4.1E-20 1.4E-24 176.3 12.2 128 27-179 34-161 (172)
23 3hra_A Ankyrin repeat family p 99.8 6.1E-20 2.1E-24 178.6 13.6 132 28-183 4-137 (201)
24 1oy3_D Transcription factor in 99.8 6.5E-20 2.2E-24 187.0 13.8 142 27-179 43-251 (282)
25 2xai_A ASB-9, ankyrin repeat a 99.8 1.6E-19 5.5E-24 184.7 16.8 128 28-181 35-162 (261)
26 3aji_A 26S proteasome non-ATPa 99.8 1.2E-19 4.1E-24 180.4 15.4 130 28-182 39-168 (231)
27 3f6q_A Integrin-linked protein 99.8 6.9E-20 2.4E-24 176.4 13.1 128 28-180 38-165 (179)
28 1yyh_A HN1;, notch 1, ankyrin 99.8 5.1E-20 1.7E-24 187.3 12.6 133 27-183 55-187 (253)
29 2xai_A ASB-9, ankyrin repeat a 99.8 9.6E-20 3.3E-24 186.4 14.6 130 28-183 2-131 (261)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2E-19 6.8E-24 168.5 15.5 125 30-180 3-127 (156)
31 2dzn_A Probable 26S proteasome 99.8 2.6E-19 8.8E-24 177.4 16.6 172 27-225 34-217 (228)
32 4b93_B Ankyrin repeat domain-c 99.8 4.1E-20 1.4E-24 191.8 11.1 124 31-179 88-211 (269)
33 3twr_A Tankyrase-2; ankyrin re 99.8 1.1E-19 3.9E-24 172.0 13.2 124 28-177 41-164 (165)
34 2f8y_A Notch homolog 1, transl 99.8 1.9E-19 6.6E-24 177.9 14.6 133 27-183 23-155 (223)
35 3aji_A 26S proteasome non-ATPa 99.8 1.3E-19 4.3E-24 180.3 13.3 132 28-183 5-136 (231)
36 1awc_B Protein (GA binding pro 99.8 2.9E-19 1E-23 167.6 14.9 121 27-172 32-152 (153)
37 2etb_A Transient receptor pote 99.8 7.2E-20 2.4E-24 185.8 11.1 133 29-184 2-170 (256)
38 1k1a_A B-cell lymphoma 3-encod 99.8 2E-19 6.9E-24 179.3 14.1 130 28-181 8-144 (241)
39 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.4E-19 8.2E-24 154.8 12.3 93 75-178 1-93 (93)
40 1ikn_D Protein (I-kappa-B-alph 99.8 3.1E-19 1.1E-23 178.8 14.7 128 28-180 44-178 (236)
41 3c5r_A BARD-1, BRCA1-associate 99.8 5.3E-20 1.8E-24 169.5 8.2 127 27-178 8-134 (137)
42 3v31_A Ankyrin repeat family A 99.8 1.9E-19 6.6E-24 170.8 12.2 127 28-179 35-161 (167)
43 2rfm_A Putative ankyrin repeat 99.8 3.2E-19 1.1E-23 173.4 14.0 124 28-176 67-190 (192)
44 3b7b_A Euchromatic histone-lys 99.8 3.7E-19 1.3E-23 177.6 14.7 131 28-183 10-141 (237)
45 3d9h_A CDNA FLJ77766, highly s 99.8 3.4E-19 1.2E-23 185.3 14.6 132 26-183 56-187 (285)
46 1k1a_A B-cell lymphoma 3-encod 99.8 7.8E-19 2.7E-23 175.1 16.6 131 28-183 45-180 (241)
47 3utm_A Tankyrase-1; tankyrase, 99.8 4.3E-19 1.5E-23 185.9 15.4 132 28-183 23-154 (351)
48 3aaa_C Myotrophin, protein V-1 99.8 2.2E-19 7.5E-24 162.5 11.4 109 29-156 7-115 (123)
49 3d9h_A CDNA FLJ77766, highly s 99.8 7.5E-19 2.6E-23 182.7 16.8 167 28-225 91-264 (285)
50 3b7b_A Euchromatic histone-lys 99.8 4.6E-19 1.6E-23 176.9 14.5 132 28-183 43-174 (237)
51 3ehr_A Osteoclast-stimulating 99.8 9.6E-20 3.3E-24 181.4 9.4 131 29-184 73-204 (222)
52 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.1E-19 3.9E-24 183.9 10.0 130 28-180 36-166 (239)
53 1bd8_A P19INK4D CDK4/6 inhibit 99.8 5.2E-19 1.8E-23 165.7 13.6 121 28-175 35-155 (156)
54 3hra_A Ankyrin repeat family p 99.8 6.8E-19 2.3E-23 171.2 14.9 131 28-182 38-174 (201)
55 2f8y_A Notch homolog 1, transl 99.8 9.8E-19 3.4E-23 172.9 15.7 133 27-183 56-188 (223)
56 1yyh_A HN1;, notch 1, ankyrin 99.8 8.4E-19 2.9E-23 178.3 15.0 131 27-181 88-218 (253)
57 1s70_B 130 kDa myosin-binding 99.8 1.2E-18 4.1E-23 180.0 16.3 131 28-183 72-262 (299)
58 1dcq_A PYK2-associated protein 99.8 9E-19 3.1E-23 182.8 15.2 131 30-179 131-264 (278)
59 2rfa_A Transient receptor pote 99.8 6.7E-19 2.3E-23 175.4 13.7 133 27-179 35-184 (232)
60 2b0o_E UPLC1; arfgap, structur 99.8 5.3E-19 1.8E-23 186.7 13.1 132 29-179 151-285 (301)
61 2etb_A Transient receptor pote 99.8 4.5E-19 1.5E-23 179.9 11.8 141 27-179 88-247 (256)
62 3lvq_E ARF-GAP with SH3 domain 99.8 9.8E-19 3.4E-23 196.7 15.7 132 30-180 133-267 (497)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.5E-19 8.5E-24 181.4 9.8 129 29-183 5-133 (239)
64 3ljn_A Hypothetical protein; a 99.8 4E-19 1.4E-23 189.8 11.7 128 28-182 19-169 (364)
65 1wdy_A 2-5A-dependent ribonucl 99.8 2.3E-18 7.9E-23 174.7 16.2 132 27-182 146-282 (285)
66 3c5r_A BARD-1, BRCA1-associate 99.8 1.7E-18 5.9E-23 159.3 13.7 96 73-179 7-102 (137)
67 3deo_A Signal recognition part 99.8 1.2E-18 4.1E-23 169.0 13.1 110 28-156 43-152 (183)
68 2dzn_A Probable 26S proteasome 99.8 1.6E-18 5.4E-23 171.7 14.1 131 29-183 2-137 (228)
69 3t8k_A Uncharacterized protein 99.8 1.1E-19 3.8E-24 178.8 5.4 130 28-178 37-179 (186)
70 2pnn_A Transient receptor pote 99.8 7.2E-19 2.5E-23 180.3 11.5 143 28-179 100-260 (273)
71 3eu9_A Huntingtin-interacting 99.8 3.1E-18 1.1E-22 169.7 15.7 132 28-183 8-139 (240)
72 3utm_A Tankyrase-1; tankyrase, 99.8 2.8E-18 9.5E-23 179.8 15.8 98 28-144 57-154 (351)
73 3ljn_A Hypothetical protein; a 99.8 1.3E-18 4.3E-23 185.9 12.9 127 28-179 137-270 (364)
74 3kea_A K1L; tropism, ANK repea 99.8 8.3E-19 2.9E-23 182.6 11.1 126 27-179 29-155 (285)
75 1ikn_D Protein (I-kappa-B-alph 99.8 1.5E-18 5.2E-23 173.8 12.3 133 28-179 77-210 (236)
76 1sw6_A Regulatory protein SWI6 99.8 1E-18 3.4E-23 185.7 11.2 129 27-179 129-309 (327)
77 1wdy_A 2-5A-dependent ribonucl 99.8 6.3E-18 2.2E-22 171.5 16.2 131 28-182 4-134 (285)
78 3jxi_A Vanilloid receptor-rela 99.8 1.3E-18 4.5E-23 176.6 10.9 143 28-179 92-251 (260)
79 4hbd_A KN motif and ankyrin re 99.8 1.8E-18 6.3E-23 179.3 12.0 131 27-182 109-246 (276)
80 3ui2_A Signal recognition part 99.8 2.6E-18 9E-23 175.0 12.7 133 28-179 44-186 (244)
81 3t8k_A Uncharacterized protein 99.8 3.6E-19 1.2E-23 175.1 6.1 137 29-183 6-151 (186)
82 4g8k_A 2-5A-dependent ribonucl 99.8 7.4E-18 2.5E-22 178.0 15.8 130 28-181 167-301 (337)
83 1n11_A Ankyrin; clathrin, BAND 99.8 6.3E-18 2.2E-22 184.7 15.5 96 74-180 276-371 (437)
84 1n11_A Ankyrin; clathrin, BAND 99.7 4.5E-18 1.6E-22 185.9 13.7 99 74-183 243-341 (437)
85 4g8k_A 2-5A-dependent ribonucl 99.7 6.5E-18 2.2E-22 178.5 14.4 126 28-181 201-329 (337)
86 2pnn_A Transient receptor pote 99.7 2.2E-18 7.6E-23 176.7 10.4 140 27-180 52-220 (273)
87 3jxi_A Vanilloid receptor-rela 99.7 2.6E-18 8.8E-23 174.4 10.2 139 27-179 44-211 (260)
88 2fo1_E LIN-12 protein; beta-ba 99.7 1.7E-18 5.9E-23 187.0 7.7 131 27-181 123-266 (373)
89 4hbd_A KN motif and ankyrin re 99.7 5.7E-18 2E-22 175.6 11.3 124 28-176 144-273 (276)
90 2fo1_E LIN-12 protein; beta-ba 99.7 1.3E-17 4.4E-22 180.2 14.4 138 27-179 233-372 (373)
91 3jue_A Arfgap with coiled-coil 99.7 1.2E-17 4.1E-22 181.8 13.7 128 29-179 199-327 (368)
92 1d9s_A Cyclin-dependent kinase 99.7 7E-18 2.4E-22 155.5 10.0 97 74-182 10-107 (136)
93 2l6b_A NR1C; ankyrin, consensu 99.7 4.4E-18 1.5E-22 151.9 7.3 96 73-179 6-101 (115)
94 3aaa_C Myotrophin, protein V-1 99.7 1.9E-17 6.5E-22 149.7 11.6 97 73-180 4-100 (123)
95 3eu9_A Huntingtin-interacting 99.7 2.4E-17 8.2E-22 163.3 12.5 133 28-183 41-173 (240)
96 2vge_A RELA-associated inhibit 99.7 3.3E-17 1.1E-21 165.8 13.4 111 49-180 4-114 (229)
97 3kea_A K1L; tropism, ANK repea 99.7 7.4E-18 2.5E-22 175.4 7.8 130 28-183 61-191 (285)
98 2jab_A H10-2-G3; HER2, darpin, 99.7 7.6E-17 2.6E-21 148.5 11.1 98 73-181 11-108 (136)
99 1sw6_A Regulatory protein SWI6 99.7 5.4E-18 1.9E-22 180.0 2.3 126 33-175 100-227 (327)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.7 3.8E-16 1.3E-20 139.6 12.8 96 75-181 1-96 (126)
101 3ehr_A Osteoclast-stimulating 99.7 7.9E-17 2.7E-21 160.3 8.9 98 73-181 70-168 (222)
102 2zgd_A 3 repeat synthetic anky 99.7 2E-16 6.8E-21 141.2 10.1 93 69-172 17-109 (110)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.7 5.8E-16 2E-20 133.4 12.0 92 29-139 2-93 (93)
104 1bi7_B P16INK4A, MTS1, multipl 99.6 1E-16 3.5E-21 151.2 6.8 99 73-183 9-108 (156)
105 2l6b_A NR1C; ankyrin, consensu 99.6 1.8E-16 6E-21 141.4 6.8 105 28-151 8-112 (115)
106 3deo_A Signal recognition part 99.6 5.3E-16 1.8E-20 150.3 9.4 99 73-183 41-140 (183)
107 3ui2_A Signal recognition part 99.6 1E-15 3.5E-20 155.7 9.3 99 73-183 42-141 (244)
108 2aja_A Ankyrin repeat family p 99.5 1E-15 3.5E-20 167.0 1.8 126 29-177 92-223 (376)
109 2b0o_E UPLC1; arfgap, structur 99.5 8.9E-15 3E-19 154.4 7.3 106 26-156 187-295 (301)
110 3lvq_E ARF-GAP with SH3 domain 99.5 9.8E-14 3.3E-18 156.0 12.7 135 76-223 132-274 (497)
111 3jue_A Arfgap with coiled-coil 99.5 1.1E-13 3.7E-18 150.7 10.9 100 74-184 197-299 (368)
112 2zgd_A 3 repeat synthetic anky 99.4 4.2E-13 1.5E-17 119.4 11.2 88 27-133 22-109 (110)
113 1dcq_A PYK2-associated protein 99.4 3.8E-13 1.3E-17 140.1 11.3 97 77-183 131-235 (278)
114 2aja_A Ankyrin repeat family p 99.4 1E-14 3.5E-19 159.1 -3.5 121 29-179 128-251 (376)
115 1m9o_A Tristetraproline; Cys3H 99.0 1.1E-10 3.9E-15 98.7 3.1 60 276-336 9-76 (77)
116 3d2q_A Muscleblind-like protei 98.6 3.4E-09 1.2E-13 88.3 -0.1 62 278-339 5-69 (70)
117 2cqe_A KIAA1064 protein; CCCH 98.1 1.2E-06 4.2E-11 77.5 3.9 49 276-336 10-62 (98)
118 2e5s_A Otthump00000018578; ZF- 98.1 1.6E-07 5.6E-12 83.1 -1.9 63 277-339 18-83 (98)
119 2d9n_A Cleavage and polyadenyl 98.0 2.7E-06 9.2E-11 72.0 3.5 60 273-339 4-66 (77)
120 2rhk_C Cleavage and polyadenyl 97.8 4.4E-06 1.5E-10 69.8 1.1 56 276-338 13-71 (72)
121 2d9m_A Zinc finger CCCH-type d 97.7 6.2E-06 2.1E-10 67.7 0.1 50 267-319 11-63 (69)
122 3d2n_A Muscleblind-like protei 97.5 2.6E-05 8.7E-10 66.9 1.3 61 277-339 7-70 (83)
123 2d9m_A Zinc finger CCCH-type d 97.3 2.7E-05 9.3E-10 63.9 -1.0 28 312-339 18-48 (69)
124 2rpp_A Muscleblind-like protei 97.2 5.4E-05 1.8E-09 65.7 0.2 59 278-338 16-77 (89)
125 1m9o_A Tristetraproline; Cys3H 96.8 0.0006 2E-08 57.1 3.0 54 250-304 22-76 (77)
126 2cqe_A KIAA1064 protein; CCCH 93.3 0.069 2.3E-06 46.9 4.3 39 250-303 22-61 (98)
127 2d9n_A Cleavage and polyadenyl 92.4 0.079 2.7E-06 44.3 3.3 54 249-320 18-72 (77)
128 3d2q_A Muscleblind-like protei 91.6 0.07 2.4E-06 43.8 2.0 53 250-306 15-68 (70)
129 2lhn_A Nuclear polyadenylated 90.6 0.038 1.3E-06 46.8 0.0 40 280-333 32-71 (80)
130 2e5s_A Otthump00000018578; ZF- 88.4 0.13 4.4E-06 45.2 1.1 54 249-306 28-82 (98)
131 2lhn_A Nuclear polyadenylated 88.1 0.089 3E-06 44.5 0.0 41 280-333 10-50 (80)
132 2rhk_C Cleavage and polyadenyl 85.9 0.29 9.8E-06 40.5 1.7 30 309-338 11-43 (72)
133 2fc6_A Nuclear, target of EGR1 80.5 0.86 2.9E-05 34.8 2.3 24 312-335 18-45 (50)
134 3d2n_A Muscleblind-like protei 79.8 0.79 2.7E-05 38.9 2.1 50 250-305 18-68 (83)
135 2rpp_A Muscleblind-like protei 67.3 2 6.9E-05 36.9 1.6 49 250-304 26-75 (89)
136 3u1l_A PRE-mRNA-splicing facto 63.0 1.5 5.1E-05 44.5 -0.1 22 281-302 72-93 (240)
137 3u9g_A Zinc finger CCCH-type a 50.2 8.8 0.0003 38.4 3.0 43 278-336 150-199 (229)
138 2fc6_A Nuclear, target of EGR1 48.7 5.1 0.00017 30.6 0.8 26 277-302 18-44 (50)
139 3v33_A Ribonuclease ZC3H12A; r 47.2 4.7 0.00016 40.4 0.5 22 278-301 191-212 (223)
140 3v33_A Ribonuclease ZC3H12A; r 30.6 11 0.00036 37.8 0.0 23 313-335 191-214 (223)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=8.7e-23 Score=198.16 Aligned_cols=128 Identities=38% Similarity=0.538 Sum_probs=115.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
..|+.||..|+.+.++.+|+ .|+++|..+ ..|+||||+|+..++.+++++|++.| +|++.+ +.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~-~Gadvn~~d-------------~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~-d~~ 69 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIE-NGADVNASD-------------SDGRTPLHHAAENGHKEVVKLLISKG-ADVNAK-DSD 69 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-CTT
T ss_pred HHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhh-ccC
Confidence 56999999999999888776 899999998 88999999999999999999999999 999988 889
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+||||+|+..|+ .++|++||++|+|+|.+|.+|+||||+|+. .++.+++++||++|++++..+
T Consensus 70 g~TpLh~A~~~g~---~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~------~g~~~~v~~Ll~~gad~~~~d 133 (169)
T 4gpm_A 70 GRTPLHHAAENGH---KEVVKLLISKGADVNAKDSDGRTPLHHAAE------NGHKEVVKLLISKGADVNTSD 133 (169)
T ss_dssp SCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHcCC---HHHHHHHHHCcCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCccccC
Confidence 9999999999998 999999999999999999999999999998 889999999999999984433
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=7.7e-23 Score=198.54 Aligned_cols=127 Identities=36% Similarity=0.472 Sum_probs=115.6
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.++..+..+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++||++| +|+|.+
T Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~-~gad~~~~d-------------~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~- 99 (169)
T 4gpm_A 36 DGRTPLHHAAENGHKEVVKLLIS-KGADVNAKD-------------SDGRTPLHHAAENGHKEVVKLLISKG-ADVNAK- 99 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cccchhhhc-------------cCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCC-
Confidence 46688888888888877766665 899999997 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+.+|+||||+|+..|+ .++|++||++|+|++.+|.+|+||||+|+. .++.+++++|+++||++
T Consensus 100 d~~G~TpLh~A~~~g~---~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~------~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 100 DSDGRTPLHHAAENGH---KEVVKLLISKGADVNTSDSDGRTPLDLARE------HGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHTC----
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCc
Confidence 9999999999999999 999999999999999999999999999998 89999999999999999
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=4e-21 Score=185.04 Aligned_cols=127 Identities=24% Similarity=0.292 Sum_probs=120.3
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
..++|+.|+..|+.+.++.+|...+.+++..+ ..|+||||+|+..|+.++|++|++.| ++++.. +
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~ 69 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGD-------------DHGFSPLHWACREGRSAVVEMLIMRG-ARINVM-N 69 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-C
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccC-------------CCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCc-C
Confidence 45779999999999999999997788899887 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 70 ~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 70 RGDDTPLHLAASHGH---RDIVQKLLQYKADINAVNEHGNVPLHYACF------WGQDQVAEDLVANGALV 131 (179)
T ss_dssp TTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCc
Confidence 999999999999999 999999999999999999999999999998 89999999999999998
No 4
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=4.7e-21 Score=176.88 Aligned_cols=124 Identities=31% Similarity=0.411 Sum_probs=116.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|++.| +++|..
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 76 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMA-NGADVNAKD-------------EYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAV- 76 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred cccHHHHHHHHhCCHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcC-
Confidence 45688999999999998877776 799999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS 176 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G 176 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|.+|.||||+|+. .++.+++++|+++|
T Consensus 77 d~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~------~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 77 DAIGFTPLHLAAFIGH---LEIAEVLLKHGADVNAQDKFGKTAFDISIG------NGNEDLAEILQKLN 136 (136)
T ss_dssp CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCcCcCCCCCCHHHHHHH------CCCHHHHHHHHHcC
Confidence 9999999999999999 999999999999999999999999999998 89999999999986
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.86 E-value=5.4e-21 Score=181.19 Aligned_cols=127 Identities=26% Similarity=0.352 Sum_probs=120.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..|+.+.++.++...+.+++..+ ..|.||||+|+..|+.++|++|++.| ++++.. +
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~ 72 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIE-------------GRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAK-D 72 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTT-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-C
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccc-------------cCCCCHHHHHHHcChHHHHHHHHhcC-CCCCcc-C
Confidence 46889999999999999999987777777776 78999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
..|.||||+|+..|+ .+++++|+++|++++..|..|+||||+|+. .++.+++++|+++|+++
T Consensus 73 ~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 73 KGGLVPLHNACSYGH---YEVAELLVKHGAVVNVADLWKFTPLHEAAA------KGKYEICKLLLQHGADP 134 (165)
T ss_dssp TTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHHTTCCT
T ss_pred CCCCCHHHHHHHcCc---HHHHHHHHhCCCCCCCcCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCC
Confidence 999999999999999 999999999999999999999999999998 89999999999999998
No 6
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=1e-21 Score=181.39 Aligned_cols=125 Identities=24% Similarity=0.350 Sum_probs=117.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+. |+.+++++|+++| ++++..
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~- 73 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLE-AGADPNALN-------------RFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCA- 73 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCC-
T ss_pred CCccHHHHHHHcCCHHHHHHHHH-cCCCcCCcC-------------CCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCc-
Confidence 45688999999999888877776 799999987 899999999999 9999999999999 999998
Q ss_pred CCC-CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCC
Q 005270 108 GSD-GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 108 d~~-G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gad 178 (705)
+.. |.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+|
T Consensus 74 ~~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGF---LDTLVVLHRAGARLDVCDAWGRLPVDLAEE------QGHRDIARYLHAATGD 136 (136)
T ss_dssp BTTTTBCHHHHHHHHTC---HHHHHHHHHTCCCCCCCSSSSSCHHHHHHH------HTCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHH------cCCHHHHHHHHHcCCC
Confidence 888 9999999999999 999999999999999999999999999998 8899999999999986
No 7
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=1.1e-20 Score=169.25 Aligned_cols=125 Identities=36% Similarity=0.518 Sum_probs=117.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..|+.+.++.++. .|.+++..+ ..|.||||+|+..|+.+++++|++.| ++++.. +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~-~ 65 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNAKD-------------KNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAK-D 65 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-C
T ss_pred CccHHHHHHHcCcHHHHHHHHH-cCCCCCCcC-------------CCCCcHHHHHHHcCcHHHHHHHHHcC-CCCccc-C
Confidence 5688999999999988877776 799999887 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gad 178 (705)
..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++
T Consensus 66 ~~g~t~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~------~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 66 KNGRTPLHLAARNGH---LEVVKLLLEAGADVNAKDKNGRTPLHLAAR------NGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHTCC
T ss_pred CCCCcHHHHHHHcCh---HHHHHHHHHcCCCCcccCCCCCCHHHHHHH------cCcHHHHHHHHHcCCC
Confidence 999999999999999 999999999999999999999999999998 8999999999999986
No 8
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=3.1e-20 Score=177.42 Aligned_cols=129 Identities=31% Similarity=0.410 Sum_probs=120.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
...++|++||..|+.+.++.+|. .|+++|..+ ..|.||||+|+..|+.++|++|++.| ++++..
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 76 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMA-NGADVNAED-------------ASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAV- 76 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred cccchHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcc-
Confidence 34578999999999998877776 899999887 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+..|.||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 77 ~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGH---LEIVEVLLKNGADVNANDMEGHTPLHLAAM------FGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999 999999999999999999999999999998 8999999999999999843
No 9
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=3.2e-21 Score=182.17 Aligned_cols=131 Identities=23% Similarity=0.314 Sum_probs=116.3
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
...+.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+ .|+.++|++|++.| ++++.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~ 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLE-AGANPNAPN-------------SYGRRPIQVMM-MGSARVAELLLLHG-AEPNC 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHT-TTCCTTCCC-------------SSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCC
T ss_pred CccchHHHHHHHHcCCHHHHHHHHH-cCCCCCCCC-------------CCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCC
Confidence 3346789999999999988877776 799999987 89999999986 99999999999999 99999
Q ss_pred ccCCCCCh-HHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 106 ACGSDGVT-ALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 106 ~~d~~G~T-pLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+ +..|.| |||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 73 ~-d~~g~ttpL~~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 73 A-DPATLTRPVHDAAREGF---LDTLVVLHRAGARLDVRDAWGRLPVDLAEE------LGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp C-CTTTCCCHHHHHHHHTC---HHHHHHHHHHTCCSSCCCTTCCCHHHHHHH------HTCHHHHHHHSSCC------
T ss_pred c-CCCCCcHHHHHHHHCCC---HHHHHHHHHcCCCCcccCCCCCCHHHHHHH------hCHHHHHHHHHHcCCCCCcc
Confidence 8 999999 9999999999 999999999999999999999999999998 89999999999999999443
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=2.6e-20 Score=176.84 Aligned_cols=129 Identities=29% Similarity=0.396 Sum_probs=120.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.||..|+.+.++.+|. .|.+++..+ ..|+||||+|+..|+.++|++|++.| ++++.. +
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~-~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~ 66 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIE-QENVINHTD-------------EEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLL-G 66 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHH-HSSCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-C
T ss_pred CcchHHHHHHCCCHHHHHHHHH-cCCCcCCCC-------------CCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCc-C
Confidence 4578999999999999988877 689999887 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
..|.||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 67 ~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 67 KGRESALSLACSKGY---TDIVKMLLDCGVDVNEYDWNGGTPLLYAVH------GNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp TTCCCHHHHHHHHTC---HHHHHHHHHHTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCcHHHHHHHcCC---HHHHHHHHHCCCCCCcCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCCCc
Confidence 999999999999999 999999999999999999999999999998 89999999999999999443
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=2.2e-20 Score=193.84 Aligned_cols=129 Identities=22% Similarity=0.330 Sum_probs=71.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.++..++...+..+|.+.|+++|..+ .+|+||||+|+..|+.++|++|++.+ ++++.. +
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d-------------~~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~~~~-~ 116 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS-------------QDGSSPLHVAALHGRADLIPLLLKHG-ANAGAR-N 116 (269)
T ss_dssp -----------------------CCCCTTCCC-------------TTSCCHHHHHHHTTCTTHHHHHHHTT-CCTTCC-C
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC-------------CCCCCHHHHHHHcCcHHHHHHHHhcC-CCcCcc-C
Confidence 34566666666666555555555677766665 66666666666666666666666666 666665 6
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
.+|.||||+|+..++ .+++++|++.|++++.+|..|+||||+|+. .++.+++++||++|++++.
T Consensus 117 ~~g~t~l~~a~~~~~---~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~------~g~~~~v~~Ll~~gadvn~ 180 (269)
T 4b93_B 117 ADQAVPLHLACQQGH---FQVVKCLLDSNAKPNKKDLSGNTPLIYACS------GGHHELVALLLQHGASINA 180 (269)
T ss_dssp TTCCCHHHHHHHHTC---HHHHHHHHHTTCCSCCCCTTCCCHHHHHHH------TTCGGGHHHHHHTTCCTTC
T ss_pred CCCCCccccccccCh---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------CCCHHHHHHHHHCCCCCCc
Confidence 666666666666666 666666666666666666666666666666 5666666666666666643
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=5.1e-20 Score=172.80 Aligned_cols=126 Identities=24% Similarity=0.336 Sum_probs=116.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
.++|+.|+..|+.+.++.++. .|.+++ .+ ..|.||||+|+..|+.+++++|++.| ++++.. +.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~-~g~~~~-~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~~ 65 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMA-NGAPFT-TD-------------WLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDAR-TK 65 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-HTCCCC-CC-------------TTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCC-CT
T ss_pred cHHHHHHHHcCCHHHHHHHHH-cCCCCC-cC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCC-CC
Confidence 477899999999999888777 688776 34 78999999999999999999999999 999998 99
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
.|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 66 ~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 66 VDRTPLHMAASEGH---ANIVEVLLKHGADVNAKDMLKMTALHWATE------HNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp TCCCHHHHHHHHTC---HHHHHHHHTTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTC
T ss_pred CCCCHHHHHHHcCh---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCccc
Confidence 99999999999999 999999999999999999999999999998 8999999999999999943
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=2.9e-20 Score=177.36 Aligned_cols=129 Identities=26% Similarity=0.394 Sum_probs=117.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
.++|+.||..|+.+.++.+|......++..+ ..|+||||+|+..|+.++|++|++.| ++++.. +.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~~ 67 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-------------ERGFTPLIWASAFGEIETVRFLLEWG-ADPHIL-AK 67 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCC-CT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhh-cc
Confidence 4679999999999999998885444477776 89999999999999999999999999 999998 99
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
.|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 68 ~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~~ 131 (172)
T 3v30_A 68 ERESALSLASTGGY---TDIVGLLLERDVDINIYDWNGGTPLLYAVR------GNHVKCVEALLARGADLTTE 131 (172)
T ss_dssp TCCCHHHHHHHTTC---HHHHHHHHTTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCHHHHHHHCCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCcccc
Confidence 99999999999999 999999999999999999999999999998 89999999999999999443
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=1.2e-20 Score=177.63 Aligned_cols=125 Identities=24% Similarity=0.363 Sum_probs=116.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
..++|+.|+..|+.+.++.+|. .|.+++..+ ..|+||||+|+. |+.+++++|++.| ++++.. +
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~-------------~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~-~ 67 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQ-NNVNVNAQN-------------GFGRTALQVMKL-GNPEIARRLLLRG-ANPDLK-D 67 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTT-SCCCTTCCC-------------TTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCC-C
T ss_pred HhhHHHHHHHcCCHHHHHHHHh-CCCCccccC-------------ccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCC-C
Confidence 3578999999999998888775 899999887 899999999999 9999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++.
T Consensus 68 ~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 68 RTGFAVIHDAARAGF---LDTLQTLLEFQADVNIEDNEGNLPLHLAAK------EGHLRVVEFLVKHTASN 129 (162)
T ss_dssp TTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------cCCHHHHHHHHHccCCC
Confidence 999999999999999 999999999999999999999999999998 89999999999999984
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=1.5e-20 Score=187.34 Aligned_cols=131 Identities=21% Similarity=0.343 Sum_probs=120.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc-----
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDV----- 103 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDV----- 103 (705)
+.++|+.||..|+.+.++.+|...|++++..+ ..|+||||+|+..|+.++|++|++.| +++
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~ 68 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-------------AMGETALHIAALYDNLEAAMVLMEAA-PELVFEPM 68 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-chhccccc
Confidence 56899999999999999999886699999987 89999999999999999999999999 887
Q ss_pred ccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC-------------CCCCHHHHHHhhCccCCCChHHHHH
Q 005270 104 NRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA-------------YGNRPADLIAKNCNLGFNSRKKVLQ 170 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~-------------~G~TPLh~Aa~~~~~~~~g~~eive 170 (705)
+.. +..|.||||+|+..|+ .+++++|+++|++++..+. .|.||||+|+. .++.++++
T Consensus 69 ~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~------~~~~~~v~ 138 (232)
T 2rfa_A 69 TSE-LYEGQTALHIAVINQN---VNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAAC------VGSEEIVR 138 (232)
T ss_dssp CST-TTTTCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHH------HTCHHHHH
T ss_pred ccc-CCCCcCHHHHHHHcCC---HHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHH------cCCHHHHH
Confidence 444 7789999999999999 9999999999999998876 79999999998 89999999
Q ss_pred HHHhCCCCCCccc
Q 005270 171 ALLKGSGTGCVEE 183 (705)
Q Consensus 171 lLL~~Gadi~~~~ 183 (705)
+|+++|++++..+
T Consensus 139 ~Ll~~ga~~~~~d 151 (232)
T 2rfa_A 139 LLIEHGADIRAQD 151 (232)
T ss_dssp HHHHTTCCTTCCC
T ss_pred HHHHCCCCCCCCC
Confidence 9999999996554
No 16
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=190.55 Aligned_cols=132 Identities=20% Similarity=0.255 Sum_probs=121.5
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.||..|+.+.++.+|. .|+++|..+ ..|+||||+|+..|+.++|++|++.| +|+|..
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d-------------~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~ 83 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPN-------------EEGITALHNAICGANYSIVDFLITAG-ANVNSP 83 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred cchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC
Confidence 356688999999999988888776 899999987 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCCCCHHHHH--HhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYGNRPADLI--AKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G~TPLh~A--a~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|+||||+|+..|+ .+++++|+++|++++..+ .+|.||||+| +. .++.+++++|+++|++++..+
T Consensus 84 -d~~g~tpLh~A~~~g~---~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~------~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 84 -DSHGWTPLHCAASCND---TVICMALVQHGAAIFATTLSDGATAFEKCDPYR------EGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp -CTTCCCHHHHHHHTTC---HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTS------TTHHHHHHHHHHHHHHTTTSG
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHh------cChHHHHHHHHHcCCCccccc
Confidence 9999999999999999 999999999999999987 6999999999 65 899999999999999996554
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.83 E-value=1.5e-20 Score=191.69 Aligned_cols=194 Identities=18% Similarity=0.142 Sum_probs=140.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCC---CcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHD---IDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gad---vn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn 104 (705)
++.++||.||..|+.+.++.+|. .|++ ++..+ ..|+||||+|+..|+.++|++|+++| ++++
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~ 72 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQN-------------DLGQTALHLAAILGEASTVEKLYAAG-AGVL 72 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH-HHTTSGGGGCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCSS
T ss_pred CCCcHHHHHHHcCCHHHHHHHHh-cCCCcccccccC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCC
Confidence 46789999999999888877665 7777 66665 89999999999999999999999999 9999
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCC---------------------------------------------
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASAD--------------------------------------------- 139 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAd--------------------------------------------- 139 (705)
.. +..|.||||+|+..|+ .+++++|+++|++
T Consensus 73 ~~-~~~g~tpL~~A~~~~~---~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T 1oy3_D 73 VA-ERGGHTALHLACRVRA---HTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (282)
T ss_dssp CC-CTTSCCHHHHHTTTTC---HHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred CC-CCCCCCHHHHHHHcCC---cchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhh
Confidence 98 9999999999999999 9999999998765
Q ss_pred --CcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhcCCCCcc-chhccc-----
Q 005270 140 --VNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEIST-PRVLKD----- 211 (705)
Q Consensus 140 --in~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e~~~~~~-~~ll~~----- 211 (705)
++..|..|.||||+|+. .++.+++++|+++|++++..+ ...+.++.++... .+.... ..|+..
T Consensus 149 ~~~~~~~~~g~t~L~~A~~------~g~~~~v~~Ll~~g~~~~~~~--~~~g~tpL~~A~~-~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVI------HKDAEMVRLLRDAGADLNKPE--PTCGRTPLHLAVE-AQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHTCCTTCCC--TTTCCCHHHHHHH-TTCHHHHHHHHHTTCCTT
T ss_pred hcCCCcCCCCcCHHHHHHH------cCCHHHHHHHHHcCCCCCCCC--CCCCcCHHHHHHH-cCCHHHHHHHHHcCCCCc
Confidence 77889999999999998 899999999999999995433 2212222222222 222222 222222
Q ss_pred -cccccCCCcccccCCCcCC------ccccccccccccccccCcc
Q 005270 212 -GAEKKEYPVDLTLPDIKNG------IYGTDEFRMYTFKVKPCSR 249 (705)
Q Consensus 212 -~~~kke~Pldlalpd~~~~------~y~sdefrm~sfKv~PCsr 249 (705)
.+..+.+|+++++...... .+|++.......+.+|+..
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccc
Confidence 2556788888887654432 3444544444445555443
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.82 E-value=4.8e-20 Score=179.24 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=121.7
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.|+..|+.+.++.++. .|.+++..+ ..|+||||+|+..|+.+++++|++.| ++++..
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 97 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVE-NFDKLEDKD-------------IEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTK 97 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHH-HHCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-hcccccccc-------------ccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCC
Confidence 456799999999999988877776 789999887 88999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 98 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 98 -DFSGKTPLMWSIIFGY---SEMSYFLLEHGANVNDRNLEGETPLIVASK------YGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp -CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCSSCCCTTCCCHHHHHHH------HTCHHHHHHHHHTTCCTTCB
T ss_pred -CCCCCcHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCCCCc
Confidence 9999999999999999 999999999999999999999999999998 89999999999999999443
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=7.4e-20 Score=189.07 Aligned_cols=171 Identities=19% Similarity=0.292 Sum_probs=132.3
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.||..|+.+.++.+|. .|+++|..+ ..|.||||+|+..|+.++|++|+++| +++|..
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~ 102 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLE-RGADINYAN-------------VDGLTALHQACIDDNVDMVKFLVENG-ANINQP 102 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHH-HCCCTTCBC-------------TTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred cCCccHHHHHHHcCCHHHHHHHHH-cCCCCcccC-------------CCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC
Confidence 345688889999999999888776 899999987 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCC----------------------------------------
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAY---------------------------------------- 146 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~---------------------------------------- 146 (705)
+..|.||||+|+..|+ .+++++|+++|++++..|..
T Consensus 103 -~~~g~tpL~~A~~~g~---~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 178 (299)
T 1s70_B 103 -DNEGWIPLHAAASCGY---LDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML 178 (299)
T ss_dssp -CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred -CCCCCcHHHHHHHcCC---HHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHH
Confidence 9999999999999999 99999999999999877755
Q ss_pred --------------------CCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhcCCCCcc-
Q 005270 147 --------------------GNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEIST- 205 (705)
Q Consensus 147 --------------------G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e~~~~~~- 205 (705)
|.||||+|+. .++.+++++|+++|++++..+.. +.+++...+.. +....
T Consensus 179 ~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~------~g~~~~v~~Ll~~g~d~~~~d~~--g~tpL~~A~~~--~~~~~v 248 (299)
T 1s70_B 179 RDARQWLNSGHINDVRHAKSGGTALHVAAA------KGYTEVLKLLIQARYDVNIKDYD--GWTPLHAAAHW--GKEEAC 248 (299)
T ss_dssp HHHHHHHHHTCCCCCCCTTTCCCHHHHHHH------HTCHHHHHHHHTTTCCTTCCCTT--CCCHHHHHHHT--TCHHHH
T ss_pred HHHHHHHhccCcchhhhcCCCCCHHHHHHH------CCcHHHHHHHHHcCCCCCCcCCC--CCcHHHHHHhc--CCHHHH
Confidence 5566666666 77889999999999998554432 22222222222 22221
Q ss_pred chhccc------cccccCCCcccccCC
Q 005270 206 PRVLKD------GAEKKEYPVDLTLPD 226 (705)
Q Consensus 206 ~~ll~~------~~~kke~Pldlalpd 226 (705)
..|+.. .+..+.+|++++..+
T Consensus 249 ~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 249 RILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 122222 256778888887553
No 20
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=4.8e-20 Score=173.57 Aligned_cols=125 Identities=21% Similarity=0.257 Sum_probs=111.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+. |+.+.++.++. .|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 37 ~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 99 (162)
T 1ihb_A 37 FGRTALQVMKL-GNPEIARRLLL-RGANPDLKD-------------RTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIE- 99 (162)
T ss_dssp TSCCHHHHCCS-SCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred cCccHHHHHHc-CcHHHHHHHHH-cCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCc-
Confidence 45567766655 77766665555 899999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASAD-VNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAd-in~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gad 178 (705)
+..|.||||+|+..|+ .+++++|+++|++ ++..|..|.||||+|+. .++.+++++|+++||+
T Consensus 100 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~------~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 100 DNEGNLPLHLAAKEGH---LRVVEFLVKHTASNVGHRNHKGDTACDLARL------YGRNEVVSLMQANGAG 162 (162)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTC--
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHccCCCCCCcCCCCCcHHHHHHH------cCCHHHHHHHHHhCCC
Confidence 9999999999999999 9999999999998 69999999999999998 8999999999999986
No 21
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=1.4e-19 Score=172.97 Aligned_cols=124 Identities=30% Similarity=0.468 Sum_probs=115.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+ ..|.||||+|+..|+.+++++|+++| ++++..
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~- 109 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHLEIVEVLLK-NGADVNAVD-------------HAGMTPLRLAALFGHLEIVEVLLKNG-ADVNAN- 109 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCC-
Confidence 46788999999998887766665 899999887 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS 176 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G 176 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|
T Consensus 110 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 110 DMEGHTPLHLAAMFGH---LEIVEVLLKNGADVNAQDKFGKTAFDISID------NGNEDLAEILQKLN 169 (169)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHTC-
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------hCCHHHHHHHHHcC
Confidence 9999999999999999 999999999999999999999999999998 89999999999876
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=4.1e-20 Score=176.29 Aligned_cols=128 Identities=27% Similarity=0.284 Sum_probs=119.1
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|++.| ++++..
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 98 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIETVRFLLE-WGADPHILA-------------KERESALSLASTGGYTDIVGLLLERD-VDINIY 98 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCchhhc-------------ccCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCC
Confidence 356788999999999887776665 899999987 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 99 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 99 -DWNGGTPLLYAVRGNH---VKCVEALLARGADLTTEADSGYTPMDLAVA------LGYRKVQQVIENHILKL 161 (172)
T ss_dssp -CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHHHHHH------hCcHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999998 89999999999998877
No 23
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=6.1e-20 Score=178.63 Aligned_cols=132 Identities=23% Similarity=0.325 Sum_probs=112.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.||..|+.+.++.+|.+.+.+++..+ ..|.||||+|+..|+.++|++|++.| ++++..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 68 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVD-------------TEGNTPLNIAVHNNDIEIAKALIDRG-ADINLQ- 68 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCC-
Confidence 456888999999999999888887677888887 78899999999999999999999998 898887
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHH-HCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC-CCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLL-DASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS-GTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL-~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G-adi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|+ ..+++++..|..|.||||+|+. .++.+++++|+++| ++++..+
T Consensus 69 ~~~g~t~l~~A~~~~~---~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~~~ 137 (201)
T 3hra_A 69 NSISDSPYLYAGAQGR---TEILAYMLKHATPDLNKHNRYGGNALIPAAE------KGHIDNVKLLLEDGREDIDFQN 137 (201)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH------TTCHHHHHHHHHHCCCCTTCCC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHhccCcccccccCCCCcHHHHHHH------cCCHHHHHHHHHcCCCCcCCCC
Confidence 8889999999999888 89999988 5677889899999999999988 78889999999888 7774433
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=6.5e-20 Score=186.96 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=91.5
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCcc------c----------------ccc------------------
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLW------Y----------------GRI------------------ 66 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlw------y----------------g~~------------------ 66 (705)
..+.++|+.||..|+.+.++.+|. .|++++..+.. + +..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 121 (282)
T 1oy3_D 43 DLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121 (282)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCc
Confidence 346799999999999888776665 89999988710 0 000
Q ss_pred ---------------------------ccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHH
Q 005270 67 ---------------------------IGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAA 119 (705)
Q Consensus 67 ---------------------------~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa 119 (705)
...+..+..|.||||+|+..|+.++|++|+++| ++++...+..|.||||+|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~ 200 (282)
T 1oy3_D 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAV 200 (282)
T ss_dssp ----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHH
T ss_pred chhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHH
Confidence 012233455666666666666666666666666 6666652234666666666
Q ss_pred hCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 120 SGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 120 ~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
..|+ .++|++||++|++++.+|..|.||||+|+. .++.+++++|+++|+++
T Consensus 201 ~~~~---~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~------~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 201 EAQA---ASVLELLLKAGADPTARMYGGRTPLGSALL------RPNPILARLLRAHGAPE 251 (282)
T ss_dssp HTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHT------SSCHHHHHHHHHTTCCC
T ss_pred HcCC---HHHHHHHHHcCCCCcccccCCCCHHHHHHH------cCCcHHHHHHHHcCCCc
Confidence 6666 666666666666666666666666666665 56666666666666666
No 25
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.82 E-value=1.6e-19 Score=184.75 Aligned_cols=128 Identities=23% Similarity=0.294 Sum_probs=102.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++. .|++++..+ ..|+||||+|+..|+.+++++|++.| ++++.
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-- 97 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLK-HGAQVNGVT-------------ADWHTPLFNACVSGSWDCVNLLLQHG-ASVQP-- 97 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC--
Confidence 45577777777777766655554 678887776 77888888888888888888888888 88775
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+.+|.||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 98 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 98 ESDLASPIHEAARRGH---VECVNSLIAYGGNIDHKISHLGTPLYLACE------NQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp SCTTCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCBTTTBCHHHHHHH------TTCHHHHHHHHHHTCCTTC
T ss_pred CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCCcCCCCCCCHHHHHHH------hCCHHHHHHHHHcCCCCCC
Confidence 4568888888888888 888888888888888888888888888887 7888888888888888853
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.82 E-value=1.2e-19 Score=180.42 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=101.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++. .|++++..+ ..|+||||+|+..|+.+++++|+++| ++++..
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 102 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQ-LGVPVNDKD-------------DAGWSPLHIAASAGXDEIVKALLVKG-AHVNAV- 102 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH-hCCCCCCcC-------------CCCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCC-
Confidence 45677777777777776665554 677777776 77888888888888888888888887 888877
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 103 ~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~ 168 (231)
T 3aji_A 103 NQNGCTPLHYAASKNR---HEIAVMLLEGGANPDAKDHYDATAMHRAAA------KGNLKMVHILLFYKASTNIQ 168 (231)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHTTCCSCCC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCcHHHHHHH------cCCHHHHHHHHhcCCCcccc
Confidence 7788888888888887 888888888888888888888888888877 77788888888888877443
No 27
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=6.9e-20 Score=176.39 Aligned_cols=128 Identities=23% Similarity=0.238 Sum_probs=119.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+ ..|.||||+|+..|+.++|++|+++| +++|..
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 101 (179)
T 3f6q_A 38 HGFSPLHWACREGRSAVVEMLIM-RGARINVMN-------------RGDDTPLHLAASHGHRDIVQKLLQYK-ADINAV- 101 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcc-
Confidence 46688999998888877766655 899999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++
T Consensus 102 d~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~------~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 102 NEHGNVPLHYACFWGQ---DQVAEDLVANGALVSICNKYGEMPVDKAKA------PLRELLRERAEKMGQNLN 165 (179)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCSSBCCTTSCCGGGGSCH------HHHHHHHHHHHHTTCCCS
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCcchhccCCCCcHHHHHH------HHHHHHHHHHHHhhcCcc
Confidence 9999999999999999 999999999999999999999999999987 889999999999999994
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.81 E-value=5.1e-20 Score=187.33 Aligned_cols=133 Identities=23% Similarity=0.228 Sum_probs=117.8
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|++.+..+++..
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 120 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLE-ASADANIQD-------------NMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 120 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 456789999999999887766665 899999987 889999999999999999999999984488887
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.|++++.+|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 121 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~~~ 187 (253)
T 1yyh_A 121 -MHDGTTPLILAARLAV---EGMLEDLINSHADVNAVDDLGKSALHWAAA------VNNVDAAVVLLKNGANKDMQN 187 (253)
T ss_dssp -CTTCCCHHHHHHHHTC---SSHHHHHHHTTCCTTCBCTTSCBHHHHHHH------HTCHHHHHHHHHTTCCTTCCC
T ss_pred -CCCCCcHHHHHHHcCh---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCCCcC
Confidence 8899999999999998 899999999999999999999999999998 889999999999999985543
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=9.6e-20 Score=186.37 Aligned_cols=130 Identities=23% Similarity=0.264 Sum_probs=118.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.||..|+.+.++.+|. .|+++|..+ ..|.||||+|+..|+.++|++|++.| ++++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~- 65 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIIT-------------ADHVSPLHEACLGGHLSCVKILLKHG-AQVNGV- 65 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-TTCCSSCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCC-
Confidence 46789999999999988877776 799999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|+++|++++. +.+|.||||+|+. .++.+++++|+++|++++..+
T Consensus 66 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~~ 131 (261)
T 2xai_A 66 TADWHTPLFNACVSGS---WDCVNLLLQHGASVQP-ESDLASPIHEAAR------RGHVECVNSLIAYGGNIDHKI 131 (261)
T ss_dssp CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCSSC-SCTTCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCB
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCC-CCCCCCHHHHHHH------cCcHHHHHHHHHcCCCCCcCC
Confidence 9999999999999999 9999999999999986 4569999999998 899999999999999995544
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=2e-19 Score=168.54 Aligned_cols=125 Identities=25% Similarity=0.318 Sum_probs=117.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGS 109 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~ 109 (705)
.++|+.||..|+.+.++.+|...+.+++..+ ..|+||||+ +..|+.+++++|++.| ++++.. +.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~-~~ 66 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALN-------------RFGKTALQV-MMFGSTAIALELLKQG-ASPNVQ-DT 66 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCC-------------TTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCC-CT
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccC-------------CCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCc-CC
Confidence 4789999999999999999997566888887 889999999 9999999999999999 999998 99
Q ss_pred CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 110 DGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 110 ~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
.|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++ ++++
T Consensus 67 ~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 67 SGTSPVHDAARTGF---LDTLKVLVEHGADVNVPDGTGALPIHLAVQ------EGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp TSCCHHHHHHHTTC---HHHHHHHHHTTCCSCCCCTTSCCHHHHHHH------HTCHHHHHHHHTT-SCTT
T ss_pred CCCCHHHHHHHcCc---HHHHHHHHHcCCCCCCcCCCCCcHHHHHHH------hChHHHHHHHHhc-cCCC
Confidence 99999999999999 999999999999999999999999999998 8999999999999 8773
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.81 E-value=2.6e-19 Score=177.37 Aligned_cols=172 Identities=18% Similarity=0.134 Sum_probs=123.5
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcC--CCCcc-cCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCC
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDG--HDIDE-SGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSG-HVD 102 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~G--advn~-~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G-~aD 102 (705)
..+.++|+.|+..|+.+.++.++. .| .+++. .+ ..|.||||+|+..|+.+++++|++.| .++
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 99 (228)
T 2dzn_A 34 QDGRIPLHWSVSFQAHEITSFLLS-KMENVNLDDYPD-------------DSGWTPFHIACSVGNLEVVKSLYDRPLKPD 99 (228)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-TCTTCCGGGCCC-------------TTSCCHHHHHHHHCCHHHHHHHHSSSSCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-ccccccccccCC-------------CCCCCHHHHHHHcCCHHHHHHHHhCCCCcc
Confidence 456688888888888877766655 77 55555 43 78889999999999999999998876 367
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC-CCCCc
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS-GTGCV 181 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G-adi~~ 181 (705)
++.. +..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++| ++++.
T Consensus 100 ~~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 100 LNKI-TNQGVTCLHLAVGKKW---FEVSQFLIENGASVRIKDKFNQIPLHRAAS------VGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp TTCC-CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCSCCCCTTSCCHHHHHHH------TTCHHHHHHHHTTTCCCSCC
T ss_pred cccC-CcCCCCHHHHHHHcCC---HhHHHHHHHcCCCccccCCCCCCHHHHHHH------cCCHHHHHHHHhcCcccccC
Confidence 7776 7888999999998888 899999999999999889999999999988 78889999999888 77744
Q ss_pred cccccchhhHHHHHHhhcCCCCccchhc-cc------cccccCCCcccccC
Q 005270 182 EEIDNLCDQVVYKMEEQEQPEISTPRVL-KD------GAEKKEYPVDLTLP 225 (705)
Q Consensus 182 ~~~~~~~~~~~~~~l~~e~~~~~~~~ll-~~------~~~kke~Pldlalp 225 (705)
.+.. +.+++...+... .......|+ .. .+..+.+|++++..
T Consensus 170 ~d~~--g~t~L~~A~~~~-~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 170 QDKQ--GWTPLFHALAEG-HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp CCTT--SCCHHHHHHHTT-CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred cCCC--CCCHHHHHHHcC-CHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 4322 222222222221 111122222 21 25667888888754
No 32
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=4.1e-20 Score=191.77 Aligned_cols=124 Identities=25% Similarity=0.285 Sum_probs=115.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Q 005270 31 SILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSD 110 (705)
Q Consensus 31 s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~ 110 (705)
++|+.||..|+.+.++.+| +.|++++..+ ..|.||||+|+..++.+++++|++.| +++|.+ +..
T Consensus 88 TpLh~A~~~g~~~~v~~Ll-~~~a~~~~~~-------------~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~-d~~ 151 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLL-KHGANAGARN-------------ADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKK-DLS 151 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHH-HTTCCTTCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCC-CTT
T ss_pred CHHHHHHHcCcHHHHHHHH-hcCCCcCccC-------------CCCCCccccccccChHHHHHHHHHCC-CCCCCC-CCC
Confidence 7788888888877665555 5899999887 89999999999999999999999999 999998 999
Q ss_pred CChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 111 GVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 111 G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
|+||||+|+..|+ .++|++||++|+|+|..|..|+||||+|+. .++.++|++||++|+++
T Consensus 152 g~TpL~~A~~~g~---~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~------~g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 152 GNTPLIYACSGGH---HELVALLLQHGASINASNNKGNTALHEAVI------EKHVFVVELLLLHGASV 211 (269)
T ss_dssp CCCHHHHHHHTTC---GGGHHHHHHTTCCTTCBCTTSCBHHHHHHH------TTCHHHHHHHHHTTCCS
T ss_pred CCCHHHHHHHCCC---HHHHHHHHHCCCCCCccccCCCcHHHHHHH------cCCHHHHHHHHHCCCCC
Confidence 9999999999999 999999999999999999999999999999 89999999999999999
No 33
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.81 E-value=1.1e-19 Score=172.02 Aligned_cols=124 Identities=26% Similarity=0.316 Sum_probs=112.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|+++| ++++..
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 104 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVEYLLQ-HGADVHAKD-------------KGGLVPLHNACSYGHYEVAELLVKHG-AVVNVA- 104 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcChHHHHHHHHh-cCCCCCccC-------------CCCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCc-
Confidence 35688888888888877766655 899999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Ga 177 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+ .++.+++++|+++|+
T Consensus 105 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~-------~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 105 DLWKFTPLHEAAAKGK---YEICKLLLQHGADPTKKNRDGNTPLDLVK-------DGDTDIQDLLRGDAA 164 (165)
T ss_dssp CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCTGGGSC-------TTCHHHHHHHHTC--
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCcccCCCCCChhHhHh-------cCChHHHHHHhhccc
Confidence 9999999999999999 99999999999999999999999999974 478899999999886
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=1.9e-19 Score=177.95 Aligned_cols=133 Identities=23% Similarity=0.228 Sum_probs=116.4
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|++.+..+++..
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 88 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLE-ASADANIQD-------------NMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 88 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCC
T ss_pred CCCCchHHHHHHcCCHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 356789999999999888877765 899999887 889999999999999999999999984488887
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 89 -~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~~ 155 (223)
T 2f8y_A 89 -MHDGTTPLILAARLAV---EGMLEDLINSHADVNAVDDLGKSALHWAAA------VNNVDAAVVLLKNGANKDMQN 155 (223)
T ss_dssp -CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred -CCCCCcHHHHHHHhCc---HHHHHHHHHcCCCCcCcCCCCCcHHHHHHH------cCCHHHHHHHHHcCCCCCCcC
Confidence 8899999999999998 999999999999999999999999999988 888999999999999885443
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.81 E-value=1.3e-19 Score=180.30 Aligned_cols=132 Identities=30% Similarity=0.417 Sum_probs=121.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++.+|...+..++..+ ..|+||||+|+..|+.++|++|++.| ++++..
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~- 69 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTD-------------QDSRTALHWACSAGHTEIVEFLLQLG-VPVNDK- 69 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCC-
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCC-------------CCCCCHHHHHHHcCcHHHHHHHHHhC-CCCCCc-
Confidence 345789999999999999999997666667666 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|+||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 70 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~~~~ 136 (231)
T 3aji_A 70 DDAGWSPLHIAASAGX---DEIVKALLVKGAHVNAVNQNGCTPLHYAAS------KNRHEIAVMLLEGGANPDAKD 136 (231)
T ss_dssp CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCH---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999 999999999999999999999999999998 899999999999999985443
No 36
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=2.9e-19 Score=167.63 Aligned_cols=121 Identities=26% Similarity=0.320 Sum_probs=112.6
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.|+..|+.+.++.++. .|++++..+ ..|+||||+|+..|+.+++++|+++| ++++..
T Consensus 32 ~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 96 (153)
T 1awc_B 32 WLGTSPLHLAAQYGHFSTTEVLLR-AGVSRDART-------------KVDRTPLHMAASEGHANIVEVLLKHG-ADVNAK 96 (153)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCC-------------TTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCC-------------CCCCCHHHHHHHcChHHHHHHHHHcC-CCCCCC
Confidence 346789999999999887766665 899999887 88999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHH
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQAL 172 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelL 172 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|
T Consensus 97 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------~~~~~i~~~L 152 (153)
T 1awc_B 97 -DMLKMTALHWATEHNH---QEVVELLIKYGADVHTQSKFCKTAFDISID------NGNEDLAEIL 152 (153)
T ss_dssp -CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHH
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHHHHHH------cCCHHHHHHh
Confidence 9999999999999999 999999999999999999999999999998 8999999987
No 37
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=7.2e-20 Score=185.77 Aligned_cols=133 Identities=21% Similarity=0.225 Sum_probs=117.0
Q ss_pred chHHHHHHHHhCCHHHH---HHHHHhcCCCCcc----cCccccccccCccCCCCCChHHHHHHHc---CCHHHHHHHHHc
Q 005270 29 NFSILLELTASDDLDGF---RKAIEEDGHDIDE----SGLWYGRIIGSRKMGFEERTPLMIASMF---GSKDVVSYVIKS 98 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v---~~lL~e~Gadvn~----~dlwyg~~~~s~~~~~~G~TPLh~AA~~---G~~~vVk~LL~~ 98 (705)
+.++|+.||..|+.+.+ .++|.+.|++++. .+ ..|+||||+|+.. |+.++|++|++.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d-------------~~g~t~L~~A~~~~~~g~~~~v~~Ll~~ 68 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEG-------------STGKTCLMKAVLNLQDGVNACIMPLLQI 68 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBT-------------TTTBCHHHHHHHTCBTTBCTTHHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCC-------------CCCCCHHHHHHHccccchHHHHHHHHhc
Confidence 56899999999999854 4555578999998 55 8999999999999 999999999999
Q ss_pred CCCCccccc----------CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCC-------------CCCHHHHHH
Q 005270 99 GHVDVNRAC----------GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAY-------------GNRPADLIA 155 (705)
Q Consensus 99 G~aDVn~~~----------d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~-------------G~TPLh~Aa 155 (705)
| ++++... +..|.||||+|+..|+ .+++++|+++|++++..|.. |.||||+|+
T Consensus 69 g-~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 144 (256)
T 2etb_A 69 D-KDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRS---LQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA 144 (256)
T ss_dssp H-HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHH
T ss_pred C-CcccchhhhcccccccccccCCCHHHHHHHcCC---HHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHH
Confidence 8 8776331 3679999999999999 99999999999999999986 999999999
Q ss_pred hhCccCCCChHHHHHHHHh---CCCCCCcccc
Q 005270 156 KNCNLGFNSRKKVLQALLK---GSGTGCVEEI 184 (705)
Q Consensus 156 ~~~~~~~~g~~eivelLL~---~Gadi~~~~~ 184 (705)
. .++.+++++|++ +|++++..+.
T Consensus 145 ~------~~~~~~v~~Ll~~~~~ga~~n~~d~ 170 (256)
T 2etb_A 145 C------TKQWDVVTYLLENPHQPASLEATDS 170 (256)
T ss_dssp H------TTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred H------cCCHHHHHHHHhccccCCCcCccCC
Confidence 8 899999999999 9999955443
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.80 E-value=2e-19 Score=179.34 Aligned_cols=130 Identities=20% Similarity=0.237 Sum_probs=106.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHH---hcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 005270 28 YNFSILLELTASDDLDGFRKAIE---EDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~---e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn 104 (705)
++.++|+.||..|+.+.++.++. +.|.+++..+ ..|+||||+|+..|+.+++++|++.| ++++
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~ 73 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-------------NLRQTPLHLAVITTLPSVVRLLVTAG-ASPM 73 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc-------------ccCCCHHHHHHHcCCHHHHHHHHHcC-CCcc
Confidence 45688888888888888777775 4788888876 77888888888888888888888888 8888
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCC----CCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASA----DVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GA----din~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
.. +..|.||||+|+..|+ .+++++|++.++ +++..|..|.||||+|+. .++.+++++|+++|++++
T Consensus 74 ~~-~~~g~t~l~~A~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~ 143 (241)
T 1k1a_A 74 AL-DRHGQTAAHLACEHRS---PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN------TECQETVQLLLERGADID 143 (241)
T ss_dssp CC-CTTSCCHHHHHHHTTC---HHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHTTCCTT
T ss_pred cc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccccccccCcCCCcHHHHHHH------cCCHHHHHHHHHcCCCcc
Confidence 77 7888888888888888 888888888876 778888888888888887 778888888888888874
Q ss_pred c
Q 005270 181 V 181 (705)
Q Consensus 181 ~ 181 (705)
.
T Consensus 144 ~ 144 (241)
T 1k1a_A 144 A 144 (241)
T ss_dssp C
T ss_pred c
Confidence 4
No 39
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.4e-19 Score=154.77 Aligned_cols=93 Identities=43% Similarity=0.633 Sum_probs=88.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLI 154 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~A 154 (705)
+|+||||+|+..|+.+++++|++.| +++|.+ +..|+||||+|+..|+ .+++++|+++|++++.+|..|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~-d~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAK-DKNGRTPLHLAARNGH---LEVVKLLLEAGADVNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCccc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 4899999999999999999999999 999998 9999999999999999 9999999999999999999999999999
Q ss_pred HhhCccCCCChHHHHHHHHhCCCC
Q 005270 155 AKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 155 a~~~~~~~~g~~eivelLL~~Gad 178 (705)
+. .++.+++++|+++|++
T Consensus 76 ~~------~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 76 AR------NGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HH------TTCHHHHHHHHHTTCC
T ss_pred HH------cCCHHHHHHHHHcCCC
Confidence 98 8999999999999985
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.80 E-value=3.1e-19 Score=178.82 Aligned_cols=128 Identities=23% Similarity=0.269 Sum_probs=114.9
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-----
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD----- 102 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD----- 102 (705)
.+.++|+.|+..|+.+.++.+| +.|++++..+ ..|+||||+|+..|+.+++++|++.+ ++
T Consensus 44 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~ 108 (236)
T 1ikn_D 44 LQQTPLHLAVITNQPEIAEALL-GAGCDPELRD-------------FRGNTPLHLACEQGCLASVGVLTQSC-TTPHLHS 108 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHST-TTTSSSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHhcc-cchhHHH
Confidence 4668888888888887766555 4899999987 89999999999999999999999998 65
Q ss_pred -cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 103 -VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDA-YGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 103 -Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~-~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
++.. +..|.||||+|+..|+ .+++++|+++|++++.++. .|.||||+|+. .++.+++++|+++|++++
T Consensus 109 ~~~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~------~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 109 ILKAT-NYNGHTCLHLASIHGY---LGIVELLVSLGADVNAQEPCNGRTALHLAVD------LQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp GGGCC-CTTCCCHHHHHHHTTC---HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH------TTCHHHHHHHHTTTCCSC
T ss_pred Hhhcc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCC
Confidence 4555 8889999999999999 9999999999999999998 99999999998 899999999999999983
No 41
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=5.3e-20 Score=169.52 Aligned_cols=127 Identities=28% Similarity=0.367 Sum_probs=111.1
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.+++++|++.| ++++..
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~ 72 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQ-NGSDPNVKD-------------HAGWTPLHEACNHGHLKVVELLLQHK-ALVNTT 72 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCc
Confidence 346789999999999988877766 899999887 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGT 178 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gad 178 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .+..+++++|.+.+..
T Consensus 73 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~------~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 73 -GYQNDSPLHDAAKNGH---VDIVKLLLSYGASRNAVNIFGLRPVDYTDD------ESMKSLLLLPEKNESS 134 (137)
T ss_dssp -CGGGCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCGGGGCCC------HHHHHHHSCC------
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHhh------ccHHHHHhhccccccC
Confidence 9999999999999999 999999999999999999999999999976 7788888887766543
No 42
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.80 E-value=1.9e-19 Score=170.81 Aligned_cols=127 Identities=26% Similarity=0.289 Sum_probs=117.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 98 (167)
T 3v31_A 35 EGFTPLMWAAAHGQIAVVEFLLQ-NGADPQLLG-------------KGRESALSLACSKGYTDIVKMLLDCG-VDVNEY- 98 (167)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC-
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcC-------------CCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcC-
Confidence 46688999999998877766665 799999887 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++++++
T Consensus 99 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 99 DWNGGTPLLYAVHGNH---VKCVKMLLESGADPTIETDSGYNSMDLAVA------LGYRSVQQVIESHLLKL 161 (167)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------cCcHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999998 89999999999987665
No 43
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=3.2e-19 Score=173.37 Aligned_cols=124 Identities=24% Similarity=0.375 Sum_probs=115.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..++.+.++.++. .|++++..+ ..|.||||+|+..|+.+++++|+++| ++++..
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 130 (192)
T 2rfm_A 67 EGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKD-------------FSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDR- 130 (192)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCC-
T ss_pred cCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCC-
Confidence 46688999998888877766665 899999887 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS 176 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G 176 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|
T Consensus 131 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 131 NLEGETPLIVASKYGR---SEIVKKLLELGADISARDLTGLTAEASARI------FGRQEVIKIFTEVR 190 (192)
T ss_dssp CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCTTCBCTTSCBHHHHHHH------TTCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------hCcHHHHHHHHhcc
Confidence 9999999999999999 999999999999999999999999999998 89999999999865
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=3.7e-19 Score=177.57 Aligned_cols=131 Identities=29% Similarity=0.370 Sum_probs=112.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++.++. .|++++..+ ..|+||||+|+..|+.++|++|++.| ++++..
T Consensus 10 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 73 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVDICHMLVQ-AGANIDTCS-------------EDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPK- 73 (237)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHTTT-CCCCCC-
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH-cCCCcCccC-------------CCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCC-
Confidence 45688999999999887766665 799998887 78899999999999999999999988 888887
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDAS-ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.| ++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 74 ~~~g~t~L~~A~~~~~---~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~~~~ 141 (237)
T 3b7b_A 74 DAEGSTCLHLAAKKGH---YEVVQYLLSNGQMDVNCQDDGGWTPMIWATE------YKHVDLVKLLLSKGSDINIRD 141 (237)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCcHHHHHHHcCC---HHHHHHHHhCCCCCcccCCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCCCccC
Confidence 8889999999999888 89999999888 8888888899999999988 788899999999988885443
No 45
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=3.4e-19 Score=185.28 Aligned_cols=132 Identities=23% Similarity=0.244 Sum_probs=108.1
Q ss_pred cCcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 005270 26 LCYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 26 ~~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~ 105 (705)
...+.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|++.| ++++.
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 120 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIIT-------------ADHVSPLHEACLGGHLSCVKILLKHG-AQVNG 120 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHH-TTCCSCEEC-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCSSC
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCC
Confidence 3456789999999999988877766 899999887 78888888888888888888888888 88888
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
. +..|.||||+|+..|+ .+++++|++.|++++..+ .|.||||+|+. .++.+++++|+++|++++..+
T Consensus 121 ~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~------~g~~~~v~~Ll~~g~~~~~~d 187 (285)
T 3d9h_A 121 V-TADWHTPLFNACVSGS---WDCVNLLLQHGASVQPES-DLASPIHEAAR------RGHVECVNSLIAYGGNIDHKI 187 (285)
T ss_dssp C-CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCSSCSC-TTSCHHHHHHH------HTCHHHHHHHHHTTCCTTCCB
T ss_pred C-CCCCCCHHHHHHHcCH---HHHHHHHHHCCCCCCCCC-CCCCHHHHHHH------cCCHHHHHHHHHCCCCCCCcC
Confidence 7 8888888888888888 888888888888887544 48888888887 778888888888888874433
No 46
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.80 E-value=7.8e-19 Score=175.08 Aligned_cols=131 Identities=23% Similarity=0.239 Sum_probs=110.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC----Cc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHV----DV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~a----DV 103 (705)
.+.++|+.|+..|+.+.++.++. .|++++..+ ..|.||||+|+..|+.+++++|++.+ + ++
T Consensus 45 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~ 109 (241)
T 1k1a_A 45 LRQTPLHLAVITTLPSVVRLLVT-AGASPMALD-------------RHGQTAAHLACEHRSPTCLRALLDSA-APGTLDL 109 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHS-CTTSCCT
T ss_pred cCCCHHHHHHHcCCHHHHHHHHH-cCCCccccC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccc
Confidence 46688888888888877766655 899999887 78889999999999999999998887 5 77
Q ss_pred ccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 104 NRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+.. +..|.||||+|+..|+ .+++++|++.|++++..+ ..|.||||+|+. .++.+++++|+++|++++..
T Consensus 110 ~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~ 179 (241)
T 1k1a_A 110 EAR-NYDGLTALHVAVNTEC---QETVQLLLERGADIDAVDIKSGRSPLIHAVE------NNSLSMVQLLLQHGANVNAQ 179 (241)
T ss_dssp TCC-CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH------TTCHHHHHHHHHTTCCTTCB
T ss_pred ccc-CcCCCcHHHHHHHcCC---HHHHHHHHHcCCCcccccccCCCcHHHHHHH------cCCHHHHHHHHHcCCCCCCc
Confidence 776 8888899999998888 889999999999888888 788899999888 78889999999988888544
Q ss_pred c
Q 005270 183 E 183 (705)
Q Consensus 183 ~ 183 (705)
+
T Consensus 180 ~ 180 (241)
T 1k1a_A 180 M 180 (241)
T ss_dssp C
T ss_pred C
Confidence 3
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=4.3e-19 Score=185.95 Aligned_cols=132 Identities=27% Similarity=0.339 Sum_probs=124.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++++|.+.+.+++..+ ..|+||||+|+..|+.++|++|++.| ++++..
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~- 87 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASD-------------GRKSTPLHLAAGYNRVRIVQLLLQHG-ADVHAK- 87 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSS-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcc-
Confidence 356899999999999999999998899999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 88 ~~~g~t~L~~A~~~g~---~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 88 DKGGLVPLHNACSYGH---YEVTELLLKHGACVNAMDLWQFTPLHEAAS------KNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCcHHHHHHHCCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCCcccc
Confidence 9999999999999999 999999999999999999999999999998 899999999999999985443
No 48
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=2.2e-19 Score=162.55 Aligned_cols=109 Identities=24% Similarity=0.332 Sum_probs=101.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..|+.+.++.+|. .|.+++..+ ..|+||||+|+..|+.+++++|++.| +++|.. +
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-d 70 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVA-KGEDVNRTL-------------EGGRKPLHYAADCGQLEILEFLLLKG-ADINAP-D 70 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCC-------------TTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCC-C
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCCcCccC-------------CCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcC-C
Confidence 4588999999999988888776 899999887 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
..|+||||+|+..|+ .+++++|+++|++++.+|..|.||||+|..
T Consensus 71 ~~g~tpL~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 71 KHHITPLLSAVYEGH---VSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999 999999999999999999999999999843
No 49
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=7.5e-19 Score=182.72 Aligned_cols=167 Identities=21% Similarity=0.245 Sum_probs=133.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|++.| ++++.
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~-- 153 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLK-HGAQVNGVT-------------ADWHTPLFNACVSGSWDCVNLLLQHG-ASVQP-- 153 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH-TTCCSSCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHTT-CCSSC--
T ss_pred CCCCHHHHHHHCCcHHHHHHHHH-CCCCCCCCC-------------CCCCCHHHHHHHcCHHHHHHHHHHCC-CCCCC--
Confidence 56688999998888877766665 899999987 89999999999999999999999999 99986
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNL 187 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~ 187 (705)
+.+|.||||+|+..|+ .+++++|++.|++++.+|..|.||||+|+. .++.+++++|+++|++++. +..
T Consensus 154 ~~~g~t~L~~A~~~g~---~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~---~~~ 221 (285)
T 3d9h_A 154 ESDLASPIHEAARRGH---VECVNSLIAYGGNIDHKISHLGTPLYLACE------NQQRACVKKLLESGADVNQ---GKG 221 (285)
T ss_dssp SCTTSCHHHHHHHHTC---HHHHHHHHHTTCCTTCCBTTTBCHHHHHHH------TTCHHHHHHHHHTTCCTTC---CBT
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHH------cCcHHHHHHHHHCCCCCCC---CCC
Confidence 4569999999999999 999999999999999999999999999998 8999999999999999963 222
Q ss_pred hhhHHHHHHhhcCCCCcc-chhccc------cccccCCCcccccC
Q 005270 188 CDQVVYKMEEQEQPEIST-PRVLKD------GAEKKEYPVDLTLP 225 (705)
Q Consensus 188 ~~~~~~~~l~~e~~~~~~-~~ll~~------~~~kke~Pldlalp 225 (705)
+.+++...+. .+.... ..|+.. .+..+.+|++++..
T Consensus 222 g~t~L~~A~~--~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 222 QDSPLHAVVR--TASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp TBCHHHHHHH--TTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred CCCHHHHHHH--cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 2222222222 222222 222222 25667888888763
No 50
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.79 E-value=4.6e-19 Score=176.90 Aligned_cols=132 Identities=26% Similarity=0.293 Sum_probs=116.5
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++ +.|++++..+ ..|.||||+|+..|+.+++++|++.+.++++..
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~- 107 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLI-KAGALVDPKD-------------AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQ- 107 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCC-------------TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCC-------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccC-
Confidence 4568888888888887776655 5899999887 889999999999999999999999987888887
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 108 ~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~~~~ 174 (237)
T 3b7b_A 108 DDGGWTPMIWATEYKH---VDLVKLLLSKGSDINIRDNEENICLHWAAF------SGCVDIAEILLAAKCDLHAVN 174 (237)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HCCHHHHHHHHTTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCccCCCCCCHHHHHHH------CCCHHHHHHHHHcCCCCCCcC
Confidence 8899999999999999 999999999999999999999999999998 789999999999999985443
No 51
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=9.6e-20 Score=181.43 Aligned_cols=131 Identities=21% Similarity=0.241 Sum_probs=110.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCccccc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKS-GHVDVNRAC 107 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~-G~aDVn~~~ 107 (705)
+.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+||..|+.++|++||+. | +++|..
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~g-~~~~~~- 136 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLD-NRVGVNGLD-------------KAGSTALYWACHGGHKDIVEMLFTQPN-IELNQQ- 136 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHTTSTT-CCCCCC-
T ss_pred cccccccccccCcHHHHHHHHh-CCCCccccC-------------CCCCCHHHHHHHcCCHHHHHHHHcCCC-CCcccc-
Confidence 4589999999999988877776 899999887 8999999999999999999999999 7 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
+..|+||||+|+..|+ .+++++||++|++++.+|..|.||||+|+. .+..++++.|++.|+...+.+.
T Consensus 137 d~~g~tpL~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~------~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGY---ADIVQLLLAKGARTDLRNIEKKLAFDMATN------AACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp CTTSCCHHHHHHHHTC---HHHHHHHHHHTCCSCCCCTTSCCHHHHCCS------HHHHHHHC--------------
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCccccCCCCCHHHHhcc------hhHHHHHHHHhccchhhhccch
Confidence 9999999999999999 999999999999999999999999999987 8999999999999998844443
No 52
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=1.1e-19 Score=183.88 Aligned_cols=130 Identities=28% Similarity=0.314 Sum_probs=115.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.+|. .|+++|..+ ..|+||||+|+..|+.++|++||++| +|+|.+
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~- 99 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIY-EVDDPSLPN-------------DEGITALHNAVCAGHTEIVKFLVQFG-VNVNAA- 99 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTS-TTSSCCCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC-
T ss_pred hhhHHHHHHHHcCCHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcc-
Confidence 45788999999999888877665 888999887 88999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCC-CHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGN-RPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~-TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
+..|+||||+|+..|+ .+++++|+++|++++.+|..|. ||||+|.. ...++.+++++|+++|++++
T Consensus 100 d~~g~tpL~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~----~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 100 DSDGWTPLHCAASCNN---VQVCKFLVESGAAVFAMTYSDMQTAADKCEE----MEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCSSSCCCHHHHCCS----SSTTCCCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcceecCCCCcchHHHHHH----hhhccHHHHHHHHHhhhccc
Confidence 8999999999999999 9999999999999999998877 99999832 33788999999999998883
No 53
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=5.2e-19 Score=165.67 Aligned_cols=121 Identities=20% Similarity=0.271 Sum_probs=111.2
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+. |..|+.+.++.++. .|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 35 ~g~t~L~~-~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 97 (156)
T 1bd8_A 35 FGKTALQV-MMFGSTAIALELLK-QGASPNVQD-------------TSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVP- 97 (156)
T ss_dssp TSCCHHHH-SCTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCC-
T ss_pred CCCcHHHH-HHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCc-
Confidence 45677777 88888877766665 899999987 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
+..|.||||+|+..|+ .+++++|++. ++++.+|..|.||||+|+. .++.+++++|+++
T Consensus 98 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~------~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 98 DGTGALPIHLAVQEGH---TAVVSFLAAE-SDLHRRDARGLTPLELALQ------RGAQDLVDILQGH 155 (156)
T ss_dssp CTTSCCHHHHHHHHTC---HHHHHHHHTT-SCTTCCCTTSCCHHHHHHH------SCCHHHHHHHHTT
T ss_pred CCCCCcHHHHHHHhCh---HHHHHHHHhc-cCCCCcCCCCCCHHHHHHH------cCcHHHHHHHHhh
Confidence 9999999999999999 9999999999 9999999999999999998 8999999999975
No 54
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=6.8e-19 Score=171.25 Aligned_cols=131 Identities=21% Similarity=0.326 Sum_probs=118.2
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. .|++++..+ ..|.||||+|+..|+.+++++|++.+.++++..
T Consensus 38 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~- 102 (201)
T 3hra_A 38 EGNTPLNIAVHNNDIEIAKALID-RGADINLQN-------------SISDSPYLYAGAQGRTEILAYMLKHATPDLNKH- 102 (201)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHhccCcccccc-
Confidence 56789999999999887766665 899999987 899999999999999999999996654899998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCC-CCCcccCCCCCCHHHHHHhhCccCCCCh-----HHHHHHHHhCCCCCCc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDAS-ADVNSVDAYGNRPADLIAKNCNLGFNSR-----KKVLQALLKGSGTGCV 181 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~-----~eivelLL~~Gadi~~ 181 (705)
+..|.||||+|+..|+ .+++++|++.| ++++.+|..|.||||+|+. .+. .+++++|+++|++++.
T Consensus 103 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~------~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 103 NRYGGNALIPAAEKGH---IDNVKLLLEDGREDIDFQNDFGYTALIEAVG------LREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp CTTSCCSHHHHHHTTC---HHHHHHHHHHCCCCTTCCCTTSCCHHHHHHH------SSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred cCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCcCCCCCCCCCHHHHHHH------hccchhhHHHHHHHHHHCCCCCCc
Confidence 9999999999999999 99999999999 9999999999999999997 444 8999999999999944
Q ss_pred c
Q 005270 182 E 182 (705)
Q Consensus 182 ~ 182 (705)
.
T Consensus 174 ~ 174 (201)
T 3hra_A 174 K 174 (201)
T ss_dssp C
T ss_pred c
Confidence 3
No 55
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=9.8e-19 Score=172.87 Aligned_cols=133 Identities=23% Similarity=0.288 Sum_probs=120.0
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.|+..++.+.++.++.....+++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~ 121 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-------------HDGTTPLILAARLAVEGMLEDLINSH-ADVNAV 121 (223)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC-------------CCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCc
Confidence 3456889999999998888777774444888876 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 122 -~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 122 -DDLGKSALHWAAAVNN---VDAAVVLLKNGANKDMQNNREETPLFLAAR------EGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp -CTTSCBHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH------HTCHHHHHHHHHTTCCTTCCC
T ss_pred -CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCcCHHHHHHH------cCCHHHHHHHHHcCCCCcccc
Confidence 9999999999999999 999999999999999999999999999998 899999999999999994443
No 56
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=8.4e-19 Score=178.33 Aligned_cols=131 Identities=23% Similarity=0.285 Sum_probs=119.6
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
..+.++|+.|+..++.+.++.++.....+++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 88 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 153 (253)
T 1yyh_A 88 NMGRTPLHAAVSADAQGVFQILIRNRATDLDARM-------------HDGTTPLILAARLAVEGMLEDLINSH-ADVNAV 153 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC-------------TTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC-------------CCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCc
Confidence 3466899999999998888777764334888887 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 154 -d~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~------~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 154 -DDLGKSALHWAAAVNN---VDAAVVLLKNGANKDMQNNREETPLFLAAR------EGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp -CTTSCBHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHTTCCTTC
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------CCCHHHHHHHHHcCCCccc
Confidence 9999999999999999 999999999999999999999999999998 8999999999999999943
No 57
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=1.2e-18 Score=179.96 Aligned_cols=131 Identities=29% Similarity=0.376 Sum_probs=117.0
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|+++| ++++..
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~-------------~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~- 135 (299)
T 1s70_B 72 DGLTALHQACIDDNVDMVKFLVE-NGANINQPD-------------NEGWIPLHAAASCGYLDIAEYLISQG-AHVGAV- 135 (299)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCC-------------CCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCc-
Confidence 45688999998888877766655 899999987 89999999999999999999999999 888754
Q ss_pred C------------------------------------------------------------CCCChHHHHHHhCCCCChH
Q 005270 108 G------------------------------------------------------------SDGVTALHCAASGGSANSV 127 (705)
Q Consensus 108 d------------------------------------------------------------~~G~TpLH~Aa~~G~~~~~ 127 (705)
+ ..|.||||+|+..|+ .
T Consensus 136 ~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~---~ 212 (299)
T 1s70_B 136 NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGY---T 212 (299)
T ss_dssp CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTC---H
T ss_pred CCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCc---H
Confidence 3 357788999999999 9
Q ss_pred HHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 128 EVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 128 eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 213 ~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~------~~~~~~v~~Ll~~gad~~~~d 262 (299)
T 1s70_B 213 EVLKLLIQARYDVNIKDYDGWTPLHAAAH------WGKEEACRILVENLCDMEAVN 262 (299)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHh------cCCHHHHHHHHHcCCCCCCcC
Confidence 99999999999999999999999999999 899999999999999995544
No 58
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=9e-19 Score=182.82 Aligned_cols=131 Identities=22% Similarity=0.308 Sum_probs=117.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCcccc
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMF---GSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~---G~~~vVk~LL~~G~aDVn~~ 106 (705)
+..|+.|+..+|.+.++.++. .|.+++... .....+..|+||||+|+.. |+.++|++|+++| +|+|.+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~-~g~~~~~~~-------~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~ 201 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYA-DGVDLTEKI-------PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQ 201 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH-TTCCTTSBC-------CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCC
T ss_pred hhhhhhHhhhcccHHHHHHHH-hhcchhhhc-------cccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCcccc
Confidence 478899999999999988776 788866542 0112247899999999999 8999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|+||||+|+..|+ .++|++||++|+|++.+|.+|.||||+|+. .++.+++++|+++|++.
T Consensus 202 -d~~g~TpLh~A~~~g~---~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~------~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 202 -TGKGSTALHYCCLTDN---AECLKLLLRGKASIEIANESGETPLDIAKR------LKHEHCEELLTQALSGR 264 (278)
T ss_dssp -CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHHTTC
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCccCCCCCHHHHHHH------cCCHHHHHHHHHcCCCC
Confidence 9999999999999999 999999999999999999999999999998 89999999999999876
No 59
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.78 E-value=6.7e-19 Score=175.40 Aligned_cols=133 Identities=23% Similarity=0.285 Sum_probs=114.8
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.+|. .|+++.... ....+..|+||||+|+..|+.+++++|+++| ++++..
T Consensus 35 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~ 104 (232)
T 2rfa_A 35 AMGETALHIAALYDNLEAAMVLME-AAPELVFEP--------MTSELYEGQTALHIAVINQNVNLVRALLARG-ASVSAR 104 (232)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-HCGGGGGCC--------CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCchhcccc--------ccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCCCcc
Confidence 356788999999998887776666 787763221 1122478999999999999999999999999 999986
Q ss_pred cCC-------------CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHH----
Q 005270 107 CGS-------------DGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVL---- 169 (705)
Q Consensus 107 ~d~-------------~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eiv---- 169 (705)
+. .|.||||+|+..|+ .+++++|+++|+|++.+|..|+||||+|+. .++.+++
T Consensus 105 -~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~------~~~~~~~~~i~ 174 (232)
T 2rfa_A 105 -ATGSVFHYRPHNLIYYGEHPLSFAACVGS---EEIVRLLIEHGADIRAQDSLGNTVLHILIL------QPNKTFACQMY 174 (232)
T ss_dssp -CCSGGGSCCTTCSCCCCSSHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHT------CSCHHHHHHHH
T ss_pred -cCCcceeecccccccCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHH------cCChHHHHHHH
Confidence 44 79999999999999 999999999999999999999999999998 7888877
Q ss_pred HHHHhCCCCC
Q 005270 170 QALLKGSGTG 179 (705)
Q Consensus 170 elLL~~Gadi 179 (705)
++|+++|+++
T Consensus 175 ~~Ll~~g~~~ 184 (232)
T 2rfa_A 175 NLLLSYDGGD 184 (232)
T ss_dssp HHHHHTTCSC
T ss_pred HHHHhcCCch
Confidence 9999999988
No 60
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=5.3e-19 Score=186.74 Aligned_cols=132 Identities=25% Similarity=0.296 Sum_probs=117.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCccc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMF---GSKDVVSYVIKSGHVDVNR 105 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~---G~~~vVk~LL~~G~aDVn~ 105 (705)
..+.|+.|+..|+++.++.+|. .|++++... .....+..|+||||+|+.. |+.++|++||++| +|+|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~-~g~d~~~~~-------~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~ 221 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFA-NGQDFGQPL-------PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDA 221 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCE-------ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHh-cCCcccccC-------CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCC
Confidence 3467999999999999998875 899998731 0001138899999999997 8999999999999 99999
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+ +.+|+||||+|+..|+ .+++++||++|+|++.+|.+|.||||+|+. .++.+++++|+++|++.
T Consensus 222 ~-d~~G~TpLh~A~~~g~---~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~------~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 222 K-AADGNTALHYAALYNQ---PDCLKLLLKGRALVGTVNEAGETALDIARK------KHHKECEELLEQAQAGT 285 (301)
T ss_dssp C-CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCCSCCCTTSCCHHHHHHH------HTCHHHHHHHHHHHHHT
T ss_pred C-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------cCCHHHHHHHHHhcCCC
Confidence 8 9999999999999999 999999999999999999999999999998 89999999999887654
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.78 E-value=4.5e-19 Score=179.86 Aligned_cols=141 Identities=21% Similarity=0.220 Sum_probs=117.8
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHH---cCCCCc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK---SGHVDV 103 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~---~G~aDV 103 (705)
..+.++|+.|+..|+.+.++.+|. .|++++..+.-.--....+..+..|.||||+|+..|+.++|++|++ .| +|+
T Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-a~~ 165 (256)
T 2etb_A 88 YQGHSALHIAIEKRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP-ASL 165 (256)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCT
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCc
Confidence 347799999999998887766665 8999998871000001111122349999999999999999999999 88 999
Q ss_pred ccccCCCCChHHHHHHh--CCCCChHH-------HHHHHHHCCCCC-------cccCCCCCCHHHHHHhhCccCCCChHH
Q 005270 104 NRACGSDGVTALHCAAS--GGSANSVE-------VVKLLLDASADV-------NSVDAYGNRPADLIAKNCNLGFNSRKK 167 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~--~G~~~~~e-------ivklLL~~GAdi-------n~~D~~G~TPLh~Aa~~~~~~~~g~~e 167 (705)
|.+ +..|+||||+|+. .++ .+ ++++|+++|+++ +.+|..|.||||+|+. .++.+
T Consensus 166 n~~-d~~g~TpLh~A~~~~~~~---~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~------~g~~~ 235 (256)
T 2etb_A 166 EAT-DSLGNTVLHALVMIADNS---PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAK------EGKIE 235 (256)
T ss_dssp TCC-CTTSCCHHHHHHHHCCSC---HHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHH------TTCHH
T ss_pred Ccc-CCCCCCHHHHHHHcccCC---chhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHH------hCCHH
Confidence 998 9999999999999 677 77 999999999999 9999999999999999 89999
Q ss_pred HHHHHHhCCCCC
Q 005270 168 VLQALLKGSGTG 179 (705)
Q Consensus 168 ivelLL~~Gadi 179 (705)
++++||++|++.
T Consensus 236 ~v~~Ll~~g~~~ 247 (256)
T 2etb_A 236 IFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhCCCCC
Confidence 999999998765
No 62
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=9.8e-19 Score=196.74 Aligned_cols=132 Identities=25% Similarity=0.283 Sum_probs=117.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHH---cCCHHHHHHHHHcCCCCcccc
Q 005270 30 FSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASM---FGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 30 ~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~---~G~~~vVk~LL~~G~aDVn~~ 106 (705)
...|+.|+..|+.+.++.+|. .|+++|.... ....+..|+||||+|+. .|+.++|++||++| +|+|.+
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~-~g~~~n~~~~-------~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~ 203 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFA-NGQDFGQPLP-------GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAK 203 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-TTCCSSSCBC-------CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCC
T ss_pred HHHHHHHHhccCHHHHHHHHh-hcccccCCCC-------CcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCcc
Confidence 367999999999999988887 8999987721 11124789999999976 89999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
|.+|+||||+|+..|+ .++|++||++|||++.+|.+|.||||+|+. .++.+++++|+++|++++
T Consensus 204 -d~~g~TpLh~A~~~g~---~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~------~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 204 -AADGNTALHYAALYNQ---PDCLKLLLKGRALVGTVNEAGETALDIARK------KHHKECEELLEQAQAGTF 267 (497)
T ss_dssp -CSSSCCHHHHHTTTTC---HHHHHHHHHTCCCCSCCCTTCCCHHHHHHH------TTCHHHHHHHHHTCC---
T ss_pred -CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH------cCCHHHHHHHHHhCCCCC
Confidence 9999999999999999 999999999999999999999999999998 899999999999999993
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=2.5e-19 Score=181.38 Aligned_cols=129 Identities=22% Similarity=0.216 Sum_probs=92.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..++.+.++.+|. +|++++.. ..|.||||+|+..|+.++|++||+.| +|+|.. +
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~-~g~~~~~~--------------~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~-d 67 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIA-HGMRVKFN--------------PLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLP-N 67 (239)
T ss_dssp -----------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCC-C
T ss_pred ccccCchhhhhhhHHHHHHHhc-cCCCcccC--------------chhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCc-C
Confidence 5677877777777776666555 89998854 57899999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
..|.||||+|+..|+ .+++++||++|++++.+|..|+||||+|+. .++.+++++|+++|++++..+
T Consensus 68 ~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~------~~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 68 DEGITALHNAVCAGH---TEIVKFLVQFGVNVNAADSDGWTPLHCAAS------CNNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp TTSCCHHHHHHHHTC---HHHHHHHHHHTCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCccCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCcceec
Confidence 999999999999999 999999999999999999999999999998 899999999999999994443
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=4e-19 Score=189.79 Aligned_cols=128 Identities=17% Similarity=0.181 Sum_probs=94.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|++.| ++++.
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~-- 81 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIE-TGVSPTIQN-------------RFGCTALHLACKFGCVDTAKYLASVG-EVHSL-- 81 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHHCCHHHHHHHHHHC-CCCCC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCccccC-------------CCCCcHHHHHHHcCCHHHHHHHHHCC-CCccc--
Confidence 46789999999999988877776 799999987 78889999999989999999888888 76654
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHC----CCCCcc-----------------cCCCCCCHHHHHHhhCccCCCC--
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDA----SADVNS-----------------VDAYGNRPADLIAKNCNLGFNS-- 164 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~----GAdin~-----------------~D~~G~TPLh~Aa~~~~~~~~g-- 164 (705)
.+|.||||+|+..|+ .+++++|++. |++++. .|..|.||||+|+. .+
T Consensus 82 -~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~------~g~~ 151 (364)
T 3ljn_A 82 -WHGQKPIHLAVMANK---TDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVG------LGPE 151 (364)
T ss_dssp -BTTBCHHHHHHHTTC---HHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHH------SCGG
T ss_pred -cCCCCHHHHHHHcCC---HHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHH------cCCc
Confidence 356666666666666 6666666666 555555 66666666666666 55
Q ss_pred hHHHHHHHHhCCCCCCcc
Q 005270 165 RKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 165 ~~eivelLL~~Gadi~~~ 182 (705)
+.+++++|+++|++++..
T Consensus 152 ~~~~v~~Ll~~ga~~~~~ 169 (364)
T 3ljn_A 152 YLEMIKILVQLGASPTAK 169 (364)
T ss_dssp GHHHHHHHHHHTCCTTCC
T ss_pred hHHHHHHHHHcCCCCccc
Confidence 666666666666666433
No 65
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=2.3e-18 Score=174.73 Aligned_cols=132 Identities=20% Similarity=0.283 Sum_probs=123.0
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCC
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS----KDVVSYVIKSGHVD 102 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~----~~vVk~LL~~G~aD 102 (705)
..+.++|+.|+..|+.+.++.++...|++++..+ ..|+||||+|+..++ .+++++|++.| ++
T Consensus 146 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~ 211 (285)
T 1wdy_A 146 KGGATALMDAAEKGHVEVLKILLDEMGADVNACD-------------NMGRNALIHALLSSDDSDVEAITHLLLDHG-AD 211 (285)
T ss_dssp CCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCC-------------TTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CC
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccC-------------CCCCCHHHHHHHccccchHHHHHHHHHHcC-CC
Confidence 3466899999999999999888886699999987 899999999999999 99999999999 99
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
++.+ +..|.||||+|+..|+ .+++++|++ .|++++.+|..|.||||+|+. .++.+++++|+++|++++.
T Consensus 212 ~~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~------~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 212 VNVR-GERGKTPLILAVEKKH---LGLVQRLLEQEHIEINDTDSDGKTALLLAVE------LKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp SSCC-CTTSCCHHHHHHHTTC---HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHSSCSCC
T ss_pred CCCc-CCCCCcHHHHHHHcCC---HHHHHHHHhccCCCccccCCCCCcHHHHHHH------cCcHHHHHHHHHcCCCCCc
Confidence 9998 9999999999999999 999999999 899999999999999999998 8999999999999999954
Q ss_pred c
Q 005270 182 E 182 (705)
Q Consensus 182 ~ 182 (705)
.
T Consensus 282 ~ 282 (285)
T 1wdy_A 282 G 282 (285)
T ss_dssp S
T ss_pred c
Confidence 3
No 66
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.7e-18 Score=159.34 Aligned_cols=96 Identities=32% Similarity=0.403 Sum_probs=93.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
+..|+||||+|+..|+.+++++|++.| ++++.. +..|.||||+|+..|+ .+++++|+++|++++.+|..|.||||
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVK-DHAGWTPLHEACNHGH---LKVVELLLQHKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCC-CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCGGGCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcC-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCcccCcCCCCCCHHH
Confidence 489999999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+|+. .++.+++++|+++|+++
T Consensus 82 ~A~~------~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 82 DAAK------NGHVDIVKLLLSYGASR 102 (137)
T ss_dssp HHHH------TTCHHHHHHHHHTTCCT
T ss_pred HHHH------cCCHHHHHHHHHcCCCC
Confidence 9998 89999999999999998
No 67
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=1.2e-18 Score=168.97 Aligned_cols=110 Identities=25% Similarity=0.319 Sum_probs=102.2
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. |.++|..+ ..|+||||+|+..|+.++|++|+++| +++|...
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~ 106 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDAVD-------------ENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRD 106 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCC
Confidence 45688999999999988888776 89999987 89999999999999999999999999 9999883
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
+..|+||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+.
T Consensus 107 ~~~g~tpL~~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 107 MRGGLTALHMAAGYVR---PEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp SSSSCCHHHHHHHTTC---HHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHhcCc---HHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 3899999999999999 999999999999999999999999999987
No 68
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.77 E-value=1.6e-18 Score=171.71 Aligned_cols=131 Identities=20% Similarity=0.269 Sum_probs=114.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCc-ccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc--cc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDID-ESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDV--NR 105 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn-~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDV--n~ 105 (705)
+.++|+.|+..|+.+.++.+|. .+.+++ ..+ ..|+||||+|+..|+.+++++|++.| +++ +.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~ 66 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLH-SKPSLLLQKD-------------QDGRIPLHWSVSFQAHEITSFLLSKM-ENVNLDD 66 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHH-HCGGGTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTC-TTCCGGG
T ss_pred CccHHHHHHHhCCHHHHHHHHh-cCccccccCC-------------CCCCCHHHHHHHcCCHHHHHHHHhcc-ccccccc
Confidence 3578999999999999988887 455543 354 89999999999999999999999998 554 44
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCC--CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDAS--ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~G--Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
..+..|.||||+|+..|+ .+++++|++.| ++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 67 ~~~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~~~~ 137 (228)
T 2dzn_A 67 YPDDSGWTPFHIACSVGN---LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG------KKWFEVSQFLIENGASVRIKD 137 (228)
T ss_dssp CCCTTSCCHHHHHHHHCC---HHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHHTTCCSCCCC
T ss_pred cCCCCCCCHHHHHHHcCC---HHHHHHHHhCCCCcccccCCcCCCCHHHHHHH------cCCHhHHHHHHHcCCCccccC
Confidence 127899999999999999 99999999998 9999999999999999998 899999999999999995544
No 69
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.77 E-value=1.1e-19 Score=178.82 Aligned_cols=130 Identities=12% Similarity=0.134 Sum_probs=102.6
Q ss_pred cchHHHHHHHHhCCHH---HHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC------HHHHHHHHHc
Q 005270 28 YNFSILLELTASDDLD---GFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS------KDVVSYVIKS 98 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~---~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~------~~vVk~LL~~ 98 (705)
.+.++||.|+..++.+ .+.++|++.|+++|..+ .+|+||||+|+..|+ .++|++||++
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~ 103 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-------------KEGTTLFFPLFQGGGNDITGTTELCKIFLEK 103 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-------------TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-------------CCCCcHHHHHHHcCCcchhhHHHHHHHHHHC
Confidence 3567788777777754 46677777888888887 888888888888886 5788888888
Q ss_pred CCCCcccccCCCCC-hHHHHHHhCCCC--ChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh
Q 005270 99 GHVDVNRACGSDGV-TALHCAASGGSA--NSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK 174 (705)
Q Consensus 99 G~aDVn~~~d~~G~-TpLH~Aa~~G~~--~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~ 174 (705)
| +|||.+ |..|. ||||+|+..+.. ...+++++||+ +|+|++.+|..|.||||+|+. .++.+++++|++
T Consensus 104 G-adin~~-d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~------~~~~~~v~~L~~ 175 (186)
T 3t8k_A 104 G-ADITAL-YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR------CQKPIALKMMED 175 (186)
T ss_dssp T-CCSSSC-BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT------TTCHHHHHHHHH
T ss_pred C-CCCCcc-CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH------cCCHHHHHHHHH
Confidence 8 888887 88888 888888885531 12568888888 888888888888888888887 788888888887
Q ss_pred CCCC
Q 005270 175 GSGT 178 (705)
Q Consensus 175 ~Gad 178 (705)
+..+
T Consensus 176 ~~~~ 179 (186)
T 3t8k_A 176 YIKK 179 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6433
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.77 E-value=7.2e-19 Score=180.32 Aligned_cols=143 Identities=17% Similarity=0.184 Sum_probs=116.8
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCcc-ccccccCccCCCCCChHHHHHHHcCCHHHHHHHHH---cCCCCc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLW-YGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK---SGHVDV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlw-yg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~---~G~aDV 103 (705)
.+.++|+.|+..|+.+.++.||. .|++++..+-- +-........+..|.||||+|+..|+.++|++||+ .| +|+
T Consensus 100 ~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-ad~ 177 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP-ADI 177 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC-CCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC-CCc
Confidence 57799999999998887766665 89999988710 00000111123479999999999999999999999 88 999
Q ss_pred ccccCCCCChHHHHHHhCCCCCh------HHHHHHHHHCCCCCc-------ccCCCCCCHHHHHHhhCccCCCChHHHHH
Q 005270 104 NRACGSDGVTALHCAASGGSANS------VEVVKLLLDASADVN-------SVDAYGNRPADLIAKNCNLGFNSRKKVLQ 170 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~------~eivklLL~~GAdin-------~~D~~G~TPLh~Aa~~~~~~~~g~~eive 170 (705)
|.+ +..|+||||+|+..|+... .+++++|+++|++++ .+|..|+||||+|+. .++.++++
T Consensus 178 ~~~-d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~------~g~~~iv~ 250 (273)
T 2pnn_A 178 SAR-DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAAS------SGKIGVLA 250 (273)
T ss_dssp TCC-CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH------TTCHHHHH
T ss_pred eee-CCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHH------hChHHHHH
Confidence 998 9999999999999876221 589999999999997 589999999999999 89999999
Q ss_pred HHHhCCC-CC
Q 005270 171 ALLKGSG-TG 179 (705)
Q Consensus 171 lLL~~Ga-di 179 (705)
+||++|+ +.
T Consensus 251 ~Ll~~ga~dp 260 (273)
T 2pnn_A 251 YILQREIHEP 260 (273)
T ss_dssp HHHHHHTC--
T ss_pred HHHHCCCCCc
Confidence 9999999 55
No 71
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.77 E-value=3.1e-18 Score=169.66 Aligned_cols=132 Identities=23% Similarity=0.271 Sum_probs=119.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++. .|++++..+ ..|.||||+|+..|+.++|++|++.+ ++++...
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~ 72 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVE-AGYDVRQPD-------------KENVTLLHWAAINNRIDLVKYYISKG-AIVDQLG 72 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCB
T ss_pred ccchHHHHHHHcCChHHHHHHHH-cCCCcCCCC-------------CCCCCHHHHHHHhCCHHHHHHHHHcC-Ccchhhc
Confidence 34577999999999988877776 899999887 88999999999999999999999999 8888765
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 73 ~~~~~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~------~~~~~~~~~Ll~~~~~~~~~~ 139 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGH---LSMVVQLMKYGADPSLIDGEGCSCIHLAAQ------FGHTSIVAYLIAKGQDVDMMD 139 (240)
T ss_dssp TTTTBCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcCCChhHHHHHcCC---HHHHHHHHHcCCCCcccCCCCCCHHHHHHH------cCHHHHHHHHHhcCCCccccC
Confidence 6679999999999999 999999999999999999999999999998 899999999999999985443
No 72
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.8e-18 Score=179.79 Aligned_cols=98 Identities=28% Similarity=0.283 Sum_probs=81.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|+++| ++++..
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~-------------~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~- 120 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQ-HGADVHAKD-------------KGGLVPLHNACSYGHYEVTELLLKHG-ACVNAM- 120 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccC-------------CCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCC-
Confidence 45688888888888877766665 899999987 78889999999999999999999988 888887
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD 144 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D 144 (705)
+..|.||||+|+..|+ .+++++|+++|++++..+
T Consensus 121 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 121 DLWQFTPLHEAASKNR---VEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCcccc
Confidence 8888888888888888 888888888887776544
No 73
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.77 E-value=1.3e-18 Score=185.95 Aligned_cols=127 Identities=18% Similarity=0.170 Sum_probs=116.6
Q ss_pred cchHHHHHHHHhC--CHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC---
Q 005270 28 YNFSILLELTASD--DLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD--- 102 (705)
Q Consensus 28 ~~~s~LL~aAa~g--d~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD--- 102 (705)
++.++|+.|+..| +.+.++.||. .|++++..+ ..|+||||+|+..|+.++|++|++.| ++
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~-~ga~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~ 201 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQ-LGASPTAKD-------------KADETPLMRAMEFRNREALDLMMDTV-PSKSS 201 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHH-HTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHC-SCSSS
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHH-cCCCCcccC-------------CCCCCHHHHHHHcCCHHHHHHHHhcc-ccccc
Confidence 4668888888888 6666655554 799999987 89999999999999999999999999 88
Q ss_pred --cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 103 --VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 103 --Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+|.. +..|+||||+|+..|+ .++|++||++|+|++.+|..|.||||+|+. .++.+++++||++|+++
T Consensus 202 ~~~~~~-~~~g~t~L~~A~~~g~---~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~------~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 202 LRLDYA-NKQGNSHLHWAILINW---EDVAMRFVEMGIDVNMEDNEHTVPLYLSVR------AAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTCC-CTTCCCTTHHHHTTTC---HHHHHHHHTTTCCTTCCCTTSCCHHHHHHH------TCCHHHHHHHHHHSCHH
T ss_pred cccccc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH------hChHHHHHHHHHcCCch
Confidence 9988 9999999999999999 999999999999999999999999999999 89999999999999877
No 74
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=8.3e-19 Score=182.55 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=116.0
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.+|. .|++++.. +|+||||+|+..|+.++|++|+++| ++++..
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~---------------~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~ 91 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLN-AGALKNLL---------------ENEFPLHQAATLEDTKIVKILLFSG-LDDSQF 91 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-TTGGGSCC---------------TTCCHHHHHTTSSSCHHHHHHHHTT-CCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCC---------------CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCc
Confidence 356789999999999988877766 78888765 3799999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCC-CCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYG-NRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G-~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|.||||+|+..|+ .+++++|+++|++++..|..| .||||+|+. .++.+++++|+++|+++
T Consensus 92 -d~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~------~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 92 -DDKGNTALYYAVDSGN---MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM------LNDVSIVSYFLSEIPST 155 (285)
T ss_dssp -CTTSCCHHHHHHHTTC---HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH------TTCHHHHHHHHTTSCTT
T ss_pred -CCCCCcHHHHHHHcCC---HHHHHHHHhcCCCCCccCCCCCCCHHHHHHH------cCCHHHHHHHHhCCCcc
Confidence 9999999999999999 999999999999999999999 799999998 89999999999999887
No 75
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.76 E-value=1.5e-18 Score=173.80 Aligned_cols=133 Identities=24% Similarity=0.228 Sum_probs=116.1
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.|+..|+.+.++.++. .|.+.+... .....+..|.||||+|+..|+.++|++|++.| ++++..
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~-------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 146 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQ-SCTTPHLHS-------ILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQ- 146 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH-STTTTSSSC-------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cccchhHHH-------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCC-
Confidence 56789999999999888776666 776533221 01223488999999999999999999999999 999998
Q ss_pred CC-CCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 108 GS-DGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 108 d~-~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+. .|.||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++.
T Consensus 147 ~~~~g~tpL~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~------~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 147 EPCNGRTALHLAVDLQN---PDLVSLLLKCGADVNRVTYQGYSPYQLTWG------RPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp CTTTCCCHHHHHHHTTC---HHHHHHHHTTTCCSCCCCTTCCCGGGGCTT------SSCHHHHHHHHTTSCGG
T ss_pred CCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCcccCCCCCHHHHHHc------cCchHHHHHHHHcchhh
Confidence 66 99999999999999 999999999999999999999999999987 89999999999999987
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.76 E-value=1e-18 Score=185.70 Aligned_cols=129 Identities=17% Similarity=0.078 Sum_probs=114.1
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC---HHHHHHHHHcCCCCc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS---KDVVSYVIKSGHVDV 103 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~---~~vVk~LL~~G~aDV 103 (705)
.++.++||.||..|+.+.++.||. .|+++|..+ ..|+||||+|+.+|+ .++++.|++.+.+++
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~-~Gad~n~~d-------------~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~ 194 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVK-HGSNRLYGD-------------NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 194 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTBCC-------------TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGG
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHhcccccHHHHHHHHHhhhccc
Confidence 456789999999998877766655 899999987 899999999999998 788888888865789
Q ss_pred ccccCCCCChHHHHHHh----CCCCChHHHHHHHHHCCC-----------------------------------------
Q 005270 104 NRACGSDGVTALHCAAS----GGSANSVEVVKLLLDASA----------------------------------------- 138 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~----~G~~~~~eivklLL~~GA----------------------------------------- 138 (705)
+.+ +..|+||||+|+. .|+ .+++++|++.++
T Consensus 195 ~~~-d~~g~tpLh~A~~~~~~~g~---~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~ 270 (327)
T 1sw6_A 195 ILE-DSMNRTILHHIIITSGMTGC---SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 270 (327)
T ss_dssp GEE-CTTCCCHHHHHHHHHTSTTC---HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred cCC-CCCCCCHHHHHHHHcccccc---HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHH
Confidence 988 9999999999999 888 999999998743
Q ss_pred ----CCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 139 ----DVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 139 ----din~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+++.+|..|+||||+|+. .++.+++++||++|+++
T Consensus 271 Ll~~~~n~~d~~G~TpLh~A~~------~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 271 IIANMLNAQDSNGDTCLNIAAR------LGNISIVDALLDYGADP 309 (327)
T ss_dssp HHHHTTTCCCTTSCCHHHHHHH------HCCHHHHHHHHHTTCCT
T ss_pred HHHhCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCC
Confidence 688899999999999998 89999999999999999
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=6.3e-18 Score=171.51 Aligned_cols=131 Identities=27% Similarity=0.349 Sum_probs=120.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. .|.+++... +..|+||||+|+..|+.++|++|++.| ++++..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~------------~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~- 68 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQE------------EEGGWTPLHNAVQMSREDIVELLLRHG-ADPVLR- 68 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCC------------TTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCccccc------------CCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCccc-
Confidence 35688899999999988877776 899998874 378999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+.+|.||||+|+..|+ .+++++|+++|++++..|..|.||||+|+. .++.+++++|+++|++++..
T Consensus 69 ~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~------~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 69 KKNGATPFLLAAIAGS---VKLLKLFLSKGADVNECDFYGFTAFMEAAV------YGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCTTCBCTTCCBHHHHHHH------TTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCccCcccCCHHHHHHH------hCCHHHHHHHHHhCCCcccc
Confidence 9999999999999999 999999999999999999999999999998 89999999999999998544
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=1.3e-18 Score=176.58 Aligned_cols=143 Identities=17% Similarity=0.194 Sum_probs=117.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCcc-ccccccCccCCCCCChHHHHHHHcCCHHHHHHHHH---cCCCCc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLW-YGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIK---SGHVDV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlw-yg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~---~G~aDV 103 (705)
.+.++|+.|+..|+.+.++.+|. .|++++..+-. +-........+..|+||||+|+..|+.++|++||+ .| +|+
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-a~~ 169 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ-ADL 169 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCC
Confidence 56789999999998887766655 89999988610 00000111122579999999999999999999999 88 999
Q ss_pred ccccCCCCChHHHHHHhCCCCCh------HHHHHHHHHCCCCC-------cccCCCCCCHHHHHHhhCccCCCChHHHHH
Q 005270 104 NRACGSDGVTALHCAASGGSANS------VEVVKLLLDASADV-------NSVDAYGNRPADLIAKNCNLGFNSRKKVLQ 170 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~------~eivklLL~~GAdi-------n~~D~~G~TPLh~Aa~~~~~~~~g~~eive 170 (705)
|.+ +..|+||||+|+..|+... .+++++|+++|+++ +.+|..|+||||+|+. .++.++++
T Consensus 170 ~~~-d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~------~g~~~~v~ 242 (260)
T 3jxi_A 170 RRQ-DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAK------TGKIGIFQ 242 (260)
T ss_dssp TCC-CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHH------TTCHHHHH
T ss_pred ccc-CCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHH------cCCHHHHH
Confidence 998 9999999999998765221 48999999999999 7899999999999999 89999999
Q ss_pred HHHhCCCCC
Q 005270 171 ALLKGSGTG 179 (705)
Q Consensus 171 lLL~~Gadi 179 (705)
+||++|++.
T Consensus 243 ~Ll~~g~~~ 251 (260)
T 3jxi_A 243 HIIRREIAD 251 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhCCCc
Confidence 999998765
No 79
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.76 E-value=1.8e-18 Score=179.31 Aligned_cols=131 Identities=24% Similarity=0.274 Sum_probs=111.6
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCC-CCcccCccccccccCccCCCCCChHHHHHH-----HcCCHHHHHHHHHcCC
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGH-DIDESGLWYGRIIGSRKMGFEERTPLMIAS-----MFGSKDVVSYVIKSGH 100 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Ga-dvn~~dlwyg~~~~s~~~~~~G~TPLh~AA-----~~G~~~vVk~LL~~G~ 100 (705)
.++.++|+.|+..|+.+.++.+|. .|+ +++..+ ..|+||||+|+ ..++.+++++|++.|
T Consensus 109 ~~g~T~Lh~A~~~g~~~~v~~Ll~-~g~~~~~~~~-------------~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g- 173 (276)
T 4hbd_A 109 SNGNTALHYSVSHANFPVVQQLLD-SGVCKVDKQN-------------RAGYSPIMLTALATLKTQDDIETVLQLFRLG- 173 (276)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-TSCCCTTCCC-------------TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHH-CCCCcCCCCC-------------CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-
Confidence 356789999999999888777766 776 888887 88899999998 567888999999998
Q ss_pred CCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHh-CCCCC
Q 005270 101 VDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLK-GSGTG 179 (705)
Q Consensus 101 aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~-~Gadi 179 (705)
++++.. +..|+||||+|+..|+ .++|++||++|+|+|.+|.+|+||||+|+. .++.+++++||+ .|+++
T Consensus 174 ~~~~~~-~~~g~tpLh~A~~~g~---~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~------~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 174 NINAKA-SQAGQTALMLAVSHGR---VDVVKALLACEADVNVQDDDGSTALMCACE------HGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp CTTCCC-TTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHTSTTCCT
T ss_pred CCcccc-CCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCCCCCCCCCHHHHHHH------CCCHHHHHHHHhcCCCCC
Confidence 777776 8889999999999988 899999999999999999999999999988 788899999998 78888
Q ss_pred Ccc
Q 005270 180 CVE 182 (705)
Q Consensus 180 ~~~ 182 (705)
+..
T Consensus 244 ~~~ 246 (276)
T 4hbd_A 244 SLT 246 (276)
T ss_dssp TCC
T ss_pred cCc
Confidence 443
No 80
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=2.6e-18 Score=174.98 Aligned_cols=133 Identities=23% Similarity=0.223 Sum_probs=114.4
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
.+.++|+.||..|+.+.++.+|. |+++|..+ ..|+||||+|+..|+.++|++||++| +++|...
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~ 107 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVD-------------ENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRD 107 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBC-------------TTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcC-------------CCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCC
Confidence 45688888888899988877776 89999987 89999999999999999999999999 9999983
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCc----------cCCCChHHHHHHHHhCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCN----------LGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~----------~~~~g~~eivelLL~~Ga 177 (705)
+..|+||||+|+..|+ .+++++|+++|++++.+|..|.||||+|+.... .+..++.+++++|++++.
T Consensus 108 ~~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVR---PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp SSSCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 3889999999999999 999999999999999999999999999984110 012577888898887755
Q ss_pred CC
Q 005270 178 TG 179 (705)
Q Consensus 178 di 179 (705)
+.
T Consensus 185 ~~ 186 (244)
T 3ui2_A 185 EY 186 (244)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.76 E-value=3.6e-19 Score=175.14 Aligned_cols=137 Identities=13% Similarity=0.193 Sum_probs=112.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCH----HHHHHHHHcCCCCcc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSK----DVVSYVIKSGHVDVN 104 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~----~vVk~LL~~G~aDVn 104 (705)
+++.|+.||..|+.+.++.++. .+ ++..+ +..|+||||+|+..|+. ++|++||+.| +|||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~-~~--~~~~~------------~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn 69 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFE-KG--YEDKE------------SVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIK 69 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHH-HS--SSCHH------------HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSS
T ss_pred cccHHHHHHHcCCHHHHHHHHh-cC--ccccc------------ccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCC
Confidence 4578999999999999988876 33 33332 25699999999999975 5999999999 9999
Q ss_pred cccCCCCChHHHHHHhCCCCCh---HHHHHHHHHCCCCCcccCCCCC-CHHHHHHhhCccCCCChHHHHHHHHh-CCCCC
Q 005270 105 RACGSDGVTALHCAASGGSANS---VEVVKLLLDASADVNSVDAYGN-RPADLIAKNCNLGFNSRKKVLQALLK-GSGTG 179 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~---~eivklLL~~GAdin~~D~~G~-TPLh~Aa~~~~~~~~g~~eivelLL~-~Gadi 179 (705)
.+ +.+|+||||+|+..|+.+. .+++++||++|||+|.+|..|. ||||+|+.. .....+..+++++||+ +|+++
T Consensus 70 ~~-d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~-~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 70 SR-TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNY-FVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp CC-CTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGC-CSCHHHHHHHHHHHHTSTTCCT
T ss_pred CC-CCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHc-CCChhhHHHHHHHHHHhcCCCC
Confidence 98 9999999999999886432 5889999999999999999999 999999861 1011235679999999 99999
Q ss_pred Cccc
Q 005270 180 CVEE 183 (705)
Q Consensus 180 ~~~~ 183 (705)
++.+
T Consensus 148 ~~~d 151 (186)
T 3t8k_A 148 LIKD 151 (186)
T ss_dssp TCCC
T ss_pred cccC
Confidence 4443
No 82
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=7.4e-18 Score=178.05 Aligned_cols=130 Identities=21% Similarity=0.296 Sum_probs=114.9
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCC----HHHHHHHHHcCCCCc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGS----KDVVSYVIKSGHVDV 103 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~----~~vVk~LL~~G~aDV 103 (705)
.+.++|+.|+..|+.+.++.||.+.|+++|..+ ..|+|+||+++..+. ..++++|+++| +|+
T Consensus 167 ~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d-------------~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~ 232 (337)
T 4g8k_A 167 GGATALMDAAEKGHVEVLKILLDEMGADVNACD-------------NMGRNALIHALLSSDDSDVEAITHLLLDHG-ADV 232 (337)
T ss_dssp CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC-------------TTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCT
T ss_pred CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC-------------CCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCC
Confidence 466899999999999999888888899999987 889999998887654 45888999999 999
Q ss_pred ccccCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 104 NRACGSDGVTALHCAASGGSANSVEVVKLLLDA-SADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 104 n~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~-GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
|.+ +..|.||||+|+..|+ .+++++|++. |++++.+|.+|+||||+|+. .++.++|++||++|++++.
T Consensus 233 n~~-d~~g~t~L~~a~~~~~---~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~------~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 233 NVR-GERGKTPLILAVEKKH---LGLVQRLLEQEHIEINDTDSDGKTALLLAVE------LKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp TCC-CGGGCCHHHHHHHTTC---HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHH------TTCHHHHHHHHTTSCSSTT
T ss_pred CCc-CCCCCCHHHHHHHhhh---hHHHHHHHHhcCCcccCcCCCCCCHHHHHHH------cCCHHHHHHHHHCCCCCCC
Confidence 988 8899999999999998 9999999975 89999999999999999998 8899999999999999844
No 83
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=6.3e-18 Score=184.72 Aligned_cols=96 Identities=31% Similarity=0.422 Sum_probs=68.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADL 153 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~ 153 (705)
..|.||||+|+..|+.+++++|+++| +++|.. +..|.||||+|+..|+ .++|++|+++|+++|.+|..|.||||+
T Consensus 276 ~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~g~---~~~v~~Ll~~gad~n~~~~~g~t~L~~ 350 (437)
T 1n11_A 276 KSGLTPLHLVAQEGHVPVADVLIKHG-VMVDAT-TRMGYTPLHVASHYGN---IKLVKFLLQHQADVNAKTKLGYSPLHQ 350 (437)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC-CSSCCCHHHHHHHSSC---SHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCC-CCCCCCHHHHHHHcCc---HHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 66677777777777777777777776 777766 6677777777777776 677777777777777777777777777
Q ss_pred HHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 154 IAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 154 Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
|+. .++.+++++|+++|++++
T Consensus 351 A~~------~g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 351 AAQ------QGHTDIVTLLLKNGASPN 371 (437)
T ss_dssp HHH------TTCHHHHHHHHHTTCCSC
T ss_pred HHH------CChHHHHHHHHHCcCCCC
Confidence 766 667777777777777763
No 84
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=4.5e-18 Score=185.85 Aligned_cols=99 Identities=22% Similarity=0.348 Sum_probs=81.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHH
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADL 153 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~ 153 (705)
..|.||||+|+..|+.++|++|++.+ ++++.. +..|.||||+|+..|+ .+++++|+++|++++..|..|.||||+
T Consensus 243 ~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 317 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLG-NKSGLTPLHLVAQEGH---VPVADVLIKHGVMVDATTRMGYTPLHV 317 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCC-CTTCCCHHHHHHHHTC---HHHHHHHHHHTCCTTCCCSSCCCHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCCC-CCCCCCHHHHHHHcCC---HHHHHHHHhCCccCCCCCCCCCCHHHH
Confidence 77888888888888888888888888 888877 7888888888888888 888888888888888888888888888
Q ss_pred HHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 154 IAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 154 Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+. .++.+++++|+++|++++..+
T Consensus 318 A~~------~g~~~~v~~Ll~~gad~n~~~ 341 (437)
T 1n11_A 318 ASH------YGNIKLVKFLLQHQADVNAKT 341 (437)
T ss_dssp HHH------SSCSHHHHHHHHTTCCTTCCC
T ss_pred HHH------cCcHHHHHHHHhcCCCCCCCC
Confidence 887 778888888888888885443
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=6.5e-18 Score=178.50 Aligned_cols=126 Identities=21% Similarity=0.282 Sum_probs=112.0
Q ss_pred cchHHHHHHHHh---CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 005270 28 YNFSILLELTAS---DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 28 ~~~s~LL~aAa~---gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn 104 (705)
.+.+++++++.. ++.+.+.++|.+.|+++|.++ ..|+||||+|+..|+.++|++|+..+++++|
T Consensus 201 ~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d-------------~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn 267 (337)
T 4g8k_A 201 MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG-------------ERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 267 (337)
T ss_dssp TSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCC-------------GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT
T ss_pred CCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcC-------------CCCCCHHHHHHHhhhhHHHHHHHHhcCCccc
Confidence 345777777654 456788899999999999997 8999999999999999999999987449999
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
.+ +.+|+||||+|+..|+ .++|++||++|||+|.. +|||+|+. .++.++|++||++||++++
T Consensus 268 ~~-d~~G~TpL~~A~~~g~---~~iv~~Ll~~GAd~n~~-----~~L~~A~~------~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 268 DT-DSDGKTALLLAVELKL---KKIAELLCKRGASTDCG-----DLVMTARR------NYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp CB-CTTSCBHHHHHHHTTC---HHHHHHHHTTSCSSTTC-----CHHHHHHH------TTCHHHHHHHHHTTCCC--
T ss_pred Cc-CCCCCCHHHHHHHcCC---HHHHHHHHHCCCCCCCC-----CHHHHHHH------cCCHHHHHHHHHCcCCCCC
Confidence 98 9999999999999999 99999999999999865 59999998 8999999999999999944
No 86
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.75 E-value=2.2e-18 Score=176.66 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=112.4
Q ss_pred CcchHHHHHHHHh---CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc
Q 005270 27 CYNFSILLELTAS---DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDV 103 (705)
Q Consensus 27 ~~~~s~LL~aAa~---gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDV 103 (705)
.++.++|+.|+.. |+.+.++.+|. .|++++..... ........+..|+||||+|+..|+.++|++||++| +|+
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~-~ga~~~~~~~~--i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~ 127 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLD-VARKTDSLKQF--VNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADV 127 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHH-HHHHTTCHHHH--HTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHH-hhccccchhHH--hhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCc
Confidence 3567888888875 77766655555 67653321100 00011123478999999999999999999999999 999
Q ss_pred ccccCC--------------CCChHHHHHHhCCCCChHHHHHHHHH---CCCCCcccCCCCCCHHHHHHhhCccCCCCh-
Q 005270 104 NRACGS--------------DGVTALHCAASGGSANSVEVVKLLLD---ASADVNSVDAYGNRPADLIAKNCNLGFNSR- 165 (705)
Q Consensus 104 n~~~d~--------------~G~TpLH~Aa~~G~~~~~eivklLL~---~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~- 165 (705)
+.. +. .|.||||+|+..|+ .+++++||+ .|++++.+|.+|+||||+|+. .++
T Consensus 128 ~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~---~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~------~~~~ 197 (273)
T 2pnn_A 128 QAA-ANGDFFKKTKGRPGFYFGELPLSLAACTNQ---LAIVKFLLQNSWQPADISARDSVGNTVLHALVE------VADN 197 (273)
T ss_dssp TCC-BCSGGGSSCSSSCCCCSCBSHHHHHHHTTC---HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH------HCCS
T ss_pred Ccc-ccccccccccccccccCCCCHHHHHHHcCC---HHHHHHHHhcccCCCCceeeCCCCCcHHHHHHH------ccCc
Confidence 988 65 79999999999999 999999999 999999999999999999998 455
Q ss_pred --------HHHHHHHHhCCCCCC
Q 005270 166 --------KKVLQALLKGSGTGC 180 (705)
Q Consensus 166 --------~eivelLL~~Gadi~ 180 (705)
.+++++|+++|++++
T Consensus 198 ~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 198 TVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHHhhhhcc
Confidence 789999999999883
No 87
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.74 E-value=2.6e-18 Score=174.42 Aligned_cols=139 Identities=19% Similarity=0.160 Sum_probs=110.2
Q ss_pred CcchHHHHHHH---HhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCc
Q 005270 27 CYNFSILLELT---ASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDV 103 (705)
Q Consensus 27 ~~~~s~LL~aA---a~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDV 103 (705)
.++.++|+.|+ ..|+.+.++.+|. .|++++..... ........+..|+||||+|+..|+.++|++||++| +++
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~-~g~~~~~~~~~--~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~ 119 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLD-IAEKTGNMREF--INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADV 119 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHH-HHHHTTCHHHH--HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHH-hcccccchHhh--hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCc
Confidence 34678888888 4566666655555 66543321100 00111122368999999999999999999999999 999
Q ss_pred ccccC--------------CCCChHHHHHHhCCCCChHHHHHHHHH---CCCCCcccCCCCCCHHHHHHhhCccCCCCh-
Q 005270 104 NRACG--------------SDGVTALHCAASGGSANSVEVVKLLLD---ASADVNSVDAYGNRPADLIAKNCNLGFNSR- 165 (705)
Q Consensus 104 n~~~d--------------~~G~TpLH~Aa~~G~~~~~eivklLL~---~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~- 165 (705)
+.. + ..|.||||+|+..|+ .++|++||+ .|++++.+|..|+||||+|+. .++
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~---~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~------~~~~ 189 (260)
T 3jxi_A 120 HAQ-ARGRFFQPKDEGGYFYFGELPLSLAACTNQ---PHIVHYLTENGHKQADLRRQDSRGNTVLHALVA------IADN 189 (260)
T ss_dssp TCC-CEECCCSSSCCCCSCCSCSSHHHHHHHTTC---HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH------HCCS
T ss_pred Ccc-ccccccCcccccccccCCCCHHHHHHHcCC---HHHHHHHHhccccCCCCcccCCCCCcHHHHHHH------hccC
Confidence 988 6 689999999999999 999999999 999999999999999999997 333
Q ss_pred --------HHHHHHHHhCCCCC
Q 005270 166 --------KKVLQALLKGSGTG 179 (705)
Q Consensus 166 --------~eivelLL~~Gadi 179 (705)
.+++++|+++|+++
T Consensus 190 ~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 190 TRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhCccc
Confidence 68999999999987
No 88
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.73 E-value=1.7e-18 Score=186.96 Aligned_cols=131 Identities=21% Similarity=0.327 Sum_probs=119.4
Q ss_pred CcchHHHHHHHHhCCHHHHHHHH-------HhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcC
Q 005270 27 CYNFSILLELTASDDLDGFRKAI-------EEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSG 99 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL-------~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G 99 (705)
.++.++|+.||..|+.+.++.+| .+.|+++|..+ ..|.||||+|+..|+.++|++|+++|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d-------------~~g~TpL~~A~~~g~~~iv~~Ll~~g 189 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD-------------CDENTPLMLAVLARRRRLVAYLMKAG 189 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCC-------------TTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCC-------------CCCCCHHHHHHHcChHHHHHHHHHCC
Confidence 35678999999998886665554 36899999997 89999999999999999999999999
Q ss_pred CCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCC---CCCcccCCCCCCHHHHHHhhCccCCCC---hHHHHHHHH
Q 005270 100 HVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDAS---ADVNSVDAYGNRPADLIAKNCNLGFNS---RKKVLQALL 173 (705)
Q Consensus 100 ~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~G---Adin~~D~~G~TPLh~Aa~~~~~~~~g---~~eivelLL 173 (705)
++++.. +..|.||||+|+..|+ .+++++|++.| ++++..|..|.||||+|+. .+ +.+++++|+
T Consensus 190 -a~~~~~-~~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~------~~~~~~~~~v~~Ll 258 (373)
T 2fo1_E 190 -ADPTIY-NKSERSALHQAAANRD---FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAH------NEGRDQVASAKLLV 258 (373)
T ss_dssp -CCSCCC-CTTCCCHHHHHHHTTC---HHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHH------SCSTTHHHHHHHHH
T ss_pred -CCCccc-CCCCCCHHHHHHHCCC---HHHHHHHHhcCccccChhhcCCCCCCHHHHHHH------hCCcchHHHHHHHH
Confidence 999998 9999999999999999 99999999998 8999999999999999998 55 899999999
Q ss_pred hCCCCCCc
Q 005270 174 KGSGTGCV 181 (705)
Q Consensus 174 ~~Gadi~~ 181 (705)
++|++++.
T Consensus 259 ~~g~~~~~ 266 (373)
T 2fo1_E 259 EKGAKVDY 266 (373)
T ss_dssp HHTCCSSC
T ss_pred HCCCCccc
Confidence 99999954
No 89
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.73 E-value=5.7e-18 Score=175.61 Aligned_cols=124 Identities=26% Similarity=0.344 Sum_probs=110.7
Q ss_pred cchHHHHHHH-----HhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 005270 28 YNFSILLELT-----ASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD 102 (705)
Q Consensus 28 ~~~s~LL~aA-----a~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD 102 (705)
.+.++|+.++ ..++.+.++.+ .+.|.+++..+ ..|+||||+|+..|+.++|++||+.| +|
T Consensus 144 ~g~tpL~~a~~~~~~~~~~~~~v~~L-l~~g~~~~~~~-------------~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad 208 (276)
T 4hbd_A 144 AGYSPIMLTALATLKTQDDIETVLQL-FRLGNINAKAS-------------QAGQTALMLAVSHGRVDVVKALLACE-AD 208 (276)
T ss_dssp TSCCHHHHGGGCCCCSHHHHHHHHHH-HHHSCTTCCCT-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred CCCCHHHHHHHHHhhhhhhHHHHHHH-HHcCCCccccC-------------CCCCCHHHHHHHcCCHHHHHHHHhCC-CC
Confidence 4668888887 44556555555 45888887776 88999999999999999999999999 99
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCC
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLD-ASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGS 176 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~-~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~G 176 (705)
+|.+ +.+|+||||+|+..|+ .+++++||+ .|+|++.+|..|.||||+|+. .++.+++++|+++.
T Consensus 209 ~n~~-d~~G~TpLh~A~~~g~---~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~------~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 209 VNVQ-DDDGSTALMCACEHGH---KEIAGLLLAVPSCDISLTDRDGSTALMVALD------AGQSEIASMLYSRM 273 (276)
T ss_dssp TTCC-CTTSCCHHHHHHHHTC---HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH------HTCHHHHHHHHHHC
T ss_pred CCCC-CCCCCCHHHHHHHCCC---HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH------cCCHHHHHHHHhcc
Confidence 9998 9999999999999999 999999999 899999999999999999999 89999999999864
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.73 E-value=1.3e-17 Score=180.15 Aligned_cols=138 Identities=21% Similarity=0.314 Sum_probs=116.9
Q ss_pred CcchHHHHHHHHhCC--HHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 005270 27 CYNFSILLELTASDD--LDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVN 104 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd--~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn 104 (705)
..+.++|+.|+..++ ...+.++|.+.|++++..+. ......+..|+||||+|+..|+.++|++|++.+++++|
T Consensus 233 ~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~-----~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 233 RNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA-----ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 307 (373)
T ss_dssp TTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG-----GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT
T ss_pred CCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc-----cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc
Confidence 345688888888774 66666777778999887531 11122357899999999999999999999988669999
Q ss_pred cccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 105 RACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 105 ~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
.. +.+|.||||+|+..|+ .++|++|+++|++++.+|..|.||||+|+. .++.+++++|++++++.
T Consensus 308 ~~-d~~g~TpL~~A~~~g~---~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~------~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 308 KQ-DEDGKTPIMLAAQEGR---IEVVMYLIQQGASVEAVDATDHTARQLAQA------NNHHNIVDIFDRCRPER 372 (373)
T ss_dssp CC-CTTCCCHHHHHHHHTC---HHHHHHHHHTTCCSSCCCSSSCCHHHHHHH------TTCHHHHHHHHTTC---
T ss_pred Cc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccCCCCCCCCHHHHHHH------cCCHHHHHHHHhcCccc
Confidence 98 9999999999999999 999999999999999999999999999999 89999999999998864
No 91
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.73 E-value=1.2e-17 Score=181.82 Aligned_cols=128 Identities=23% Similarity=0.334 Sum_probs=113.7
Q ss_pred chHHHHHHHHh-CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 29 NFSILLELTAS-DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 29 ~~s~LL~aAa~-gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
..++|+.|+.. ++++.++.+|. .|+++|..+ .+..|.||||+|+..|+.++|++||++| +|+|..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~-~Gadvn~~~-----------~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~- 264 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALA-HGADVNWVN-----------GGQDNATPLIQATAANSLLACEFLLQNG-ANVNQA- 264 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHH-TTCCTTCCC-----------TTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCcHHHHHHHccCCHHHHHHHHH-cCCCCCccc-----------cccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCC-
Confidence 34567777777 88888877765 899999875 1268999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|+||||+|+..|+ .+++++||++|++++.+|.+|.||||+|+. .++.+++++|+.++...
T Consensus 265 d~~G~TpLh~A~~~g~---~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~------~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 265 DSAGRGPLHHATILGH---TGLACLFLKRGADLGARDSEGRDPLTIAME------TANADIVTLLRLAKMRE 327 (368)
T ss_dssp CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH------TTCHHHHHHHHHHHC--
T ss_pred CCCCCCHHHHHHHcCc---HHHHHHHHHCcCCCCCcCCCCCCHHHHHHH------CCCHHHHHHHHHcCCCc
Confidence 9999999999999999 999999999999999999999999999998 89999999999887544
No 92
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.73 E-value=7e-18 Score=155.53 Aligned_cols=97 Identities=24% Similarity=0.228 Sum_probs=93.0
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCC-CCCHHH
Q 005270 74 FEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAY-GNRPAD 152 (705)
Q Consensus 74 ~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~-G~TPLh 152 (705)
..|.||||+|+..|+.++|++|++.| ++++.+ +..|.||||+|+. |+ .+++++|+++|++++.+|.. |.||||
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~-~~~g~t~L~~A~~-~~---~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLEAG-ADPNAL-NRFGRRPIQVMMM-GS---AQVAELLLLHGAEPNCADPATLTRPVH 83 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-CTTCCTTTTTSTT-SC---HHHHHHHHHHTCCSSCCBTTTTBCHHH
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCc-CCCCCCHHHHHHc-CC---HHHHHHHHHCCCCCCCcCCCCCCCHHH
Confidence 89999999999999999999999999 999998 9999999999999 99 99999999999999999999 999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCCCcc
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTGCVE 182 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi~~~ 182 (705)
+|+. .++.+++++|+++|++++..
T Consensus 84 ~A~~------~~~~~~v~~Ll~~ga~~~~~ 107 (136)
T 1d9s_A 84 DAAR------EGFLDTLVVLHRAGARLDVC 107 (136)
T ss_dssp HHHH------HTCHHHHHHHHHTCCCCCCC
T ss_pred HHHH------cCCHHHHHHHHHcCCCCCcc
Confidence 9998 89999999999999998443
No 93
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=4.4e-18 Score=151.86 Aligned_cols=96 Identities=36% Similarity=0.484 Sum_probs=93.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
+..|+||||+|+..|+.+++++|++.| ++++.. +..|.||||+|+..|+ .+++++|++.|++++.+|..|.||||
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~-d~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNAR-SKDGNTPLHLAAKNGH---AEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCC-CSSSCCTTHHHHTTTC---HHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCc-CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 589999999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+|+. .++.+++++|+++|+++
T Consensus 81 ~A~~------~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 81 LAKK------NGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HHHT------TTCHHHHHHHHTTSSSH
T ss_pred HHHH------CCCHHHHHHHHHcCCCC
Confidence 9998 89999999999999999
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.72 E-value=1.9e-17 Score=149.75 Aligned_cols=97 Identities=28% Similarity=0.296 Sum_probs=91.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
+..|.||||+|+..|+.+++++|++.| ++++.. +..|+||||+|+..|+ .+++++|++.|++++.+|..|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRT-LEGGRKPLHYAADCGQ---LEILEFLLLKGADINAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSC-CTTSSCHHHHHHHTTC---HHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC-CCcCcc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 367899999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
+|+. .++.+++++|+++|++++
T Consensus 79 ~A~~------~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 79 SAVY------EGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHHH------HTCHHHHHHHHHTTCCTT
T ss_pred HHHH------cCCHHHHHHHHHcCCCCC
Confidence 9998 899999999999999983
No 95
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.72 E-value=2.4e-17 Score=163.26 Aligned_cols=133 Identities=24% Similarity=0.284 Sum_probs=115.6
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.++. .|.+++... +..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~------------~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~- 105 (240)
T 3eu9_A 41 ENVTLLHWAAINNRIDLVKYYIS-KGAIVDQLG------------GDLNSTPLHWATRQGHLSMVVQLMKYG-ADPSLI- 105 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCB------------TTTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-
T ss_pred CCCCHHHHHHHhCCHHHHHHHHH-cCCcchhhc------------CCcCCChhHHHHHcCCHHHHHHHHHcC-CCCccc-
Confidence 45688888888888877766665 888887765 356899999999999999999999999 999988
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..|.||||+|+..|+ .+++++|++.|++++..|..|.||||+|+.. ....+++++|++.|++++..+
T Consensus 106 ~~~g~t~l~~A~~~~~---~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~-----~~~~~~~~~L~~~~~~~~~~~ 173 (240)
T 3eu9_A 106 DGEGCSCIHLAAQFGH---TSIVAYLIAKGQDVDMMDQNGMTPLMWAAYR-----THSVDPTRLLLTFNVSVNLGD 173 (240)
T ss_dssp CTTSCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-----CCSSTTHHHHHHTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCH---HHHHHHHHhcCCCccccCCCCCcHHHHHHHh-----CChHHHHHHHHhcCCCcchhh
Confidence 8999999999999999 9999999999999999999999999999951 344789999999999995443
No 96
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=165.77 Aligned_cols=111 Identities=24% Similarity=0.319 Sum_probs=97.9
Q ss_pred HHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHH
Q 005270 49 IEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVE 128 (705)
Q Consensus 49 L~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~e 128 (705)
|++.|.+++..+ ..+..+.||||+|+..|+.++|++|++.| +++|.. +..|+||||+|+..|+ .+
T Consensus 4 ll~~~~~~~~~~----------~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~-d~~g~tpLh~A~~~g~---~~ 68 (229)
T 2vge_A 4 VLRKAGSPRKAR----------RARLNPLVLLLDAALTGELEVVQQAVKEM-NDPSQP-NEEGITALHNAICGAN---YS 68 (229)
T ss_dssp ------CCCCCC----------CTTSCHHHHHHHHHHHTCHHHHHHHHHHS-SCTTCC-CTTSCCHHHHHHHTTC---HH
T ss_pred hhccCCCCcccc----------ccccchhHHHHHHHHcCCHHHHHHHHhcC-CCCCCC-CCCCCCHHHHHHHcCC---HH
Confidence 444788877654 23477889999999999999999999999 999998 9999999999999999 99
Q ss_pred HHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCC
Q 005270 129 VVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGC 180 (705)
Q Consensus 129 ivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~ 180 (705)
++++|++.|++++.+|..|+||||+|+. .++.+++++|+++|++++
T Consensus 69 ~v~~Ll~~ga~~n~~d~~g~tpLh~A~~------~g~~~~v~~Ll~~ga~~~ 114 (229)
T 2vge_A 69 IVDFLITAGANVNSPDSHGWTPLHCAAS------CNDTVICMALVQHGAAIF 114 (229)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHH------TTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHH------cCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999998 899999999999999993
No 97
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.71 E-value=7.4e-18 Score=175.37 Aligned_cols=130 Identities=18% Similarity=0.091 Sum_probs=112.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..|+.+.++.+|. .|++++..+ ..|+||||+|+..|+.++|++|+++| ++++..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d-------------~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~- 124 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLF-SGLDDSQFD-------------DKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFY- 124 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcC-------------CCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCcc-
Confidence 46788888888888877766655 899999987 89999999999999999999999999 999988
Q ss_pred CCCC-ChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 108 GSDG-VTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 108 d~~G-~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
+..| .||||+|+..|+ .+++++|+++|+++... ..|.||||+|+. .++.+++++|+++|++++..+
T Consensus 125 ~~~g~~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~------~g~~~~v~~Ll~~gad~n~~~ 191 (285)
T 3kea_A 125 GKTGWKTSFYHAVMLND---VSIVSYFLSEIPSTFDL-AILLSCIHITIK------NGHVDMMILLLDYMTSTNTNN 191 (285)
T ss_dssp SSSGGGSHHHHHHHTTC---HHHHHHHHTTSCTTCCC-STHHHHHHHHHH------TTCHHHHHHHHHHHHHTCTTC
T ss_pred CCCCCCCHHHHHHHcCC---HHHHHHHHhCCCccccc-cCCccHHHHHHH------cChHHHHHHHHHcCCCCCccc
Confidence 8888 799999999999 99999999999887332 288999999998 889999999999999885443
No 98
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.69 E-value=7.6e-17 Score=148.55 Aligned_cols=98 Identities=34% Similarity=0.432 Sum_probs=93.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPAD 152 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh 152 (705)
...+.||||+|+..|+.++|++|++.| +++|.. +..|.||||+|+..|+ .+++++|+++|++++..|..|.||||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~t~L~ 85 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG-ADVNAK-DEYGLTPLYLATAHGH---LEIVEVLLKNGADVNAVDAIGFTPLH 85 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCC-CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC-CCCCCc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCcCCCCCCCHHH
Confidence 367899999999999999999999999 999998 9999999999999999 99999999999999999999999999
Q ss_pred HHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 153 LIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 153 ~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+|+. .++.+++++|+++|++++.
T Consensus 86 ~A~~------~~~~~~v~~Ll~~g~~~~~ 108 (136)
T 2jab_A 86 LAAF------IGHLEIAEVLLKHGADVNA 108 (136)
T ss_dssp HHHH------HTCHHHHHHHHHTTCCTTC
T ss_pred HHHH------cCCHHHHHHHHHcCCCCcC
Confidence 9998 8999999999999999843
No 99
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.68 E-value=5.4e-18 Score=180.02 Aligned_cols=126 Identities=14% Similarity=0.090 Sum_probs=106.4
Q ss_pred HHHHHHhCCHHHHHHHHHhcCCCCcc-cCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Q 005270 33 LLELTASDDLDGFRKAIEEDGHDIDE-SGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDG 111 (705)
Q Consensus 33 LL~aAa~gd~~~v~~lL~e~Gadvn~-~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G 111 (705)
+++++..+.+..+.++|.+.|+++|. .+ ..|+||||+||..|+.++|++||++| +|+|.+ +.+|
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d-------------~~g~TpLh~Aa~~g~~~~v~~Ll~~G-ad~n~~-d~~g 164 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVD-------------EHGNTPLHWLTSIANLELVKHLVKHG-SNRLYG-DNMG 164 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCS-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTBC-CTTC
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccC-------------CCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCc-CCCC
Confidence 34566677788888999999999999 66 89999999999999999999999999 999998 9999
Q ss_pred ChHHHHHHhCCCCChHHHHHHHHHCC-CCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhC
Q 005270 112 VTALHCAASGGSANSVEVVKLLLDAS-ADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKG 175 (705)
Q Consensus 112 ~TpLH~Aa~~G~~~~~eivklLL~~G-Adin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~ 175 (705)
+||||+|+..|+....++++.|++.+ ++++.+|..|+||||+|+. .....++.+++++|++.
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~--~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIII--TSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHH--HHTSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHH--HccccccHHHHHHHHHH
Confidence 99999999987511136777888876 7899999999999999986 33336889999999987
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.67 E-value=3.8e-16 Score=139.56 Aligned_cols=96 Identities=42% Similarity=0.603 Sum_probs=92.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHH
Q 005270 75 EERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLI 154 (705)
Q Consensus 75 ~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~A 154 (705)
+|+||||+|+..|+.+++++|++.| ++++.. +..|.||||+|+..|+ .+++++|++.|++++.+|..|.||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAK-DKNGRTPLHLAARNGH---LEVVKLLLEAGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCC-CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC-CCCCCc-CCCCCcHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCcHHHHH
Confidence 4899999999999999999999999 999998 9999999999999999 9999999999999999999999999999
Q ss_pred HhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 155 AKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 155 a~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
+. .++.+++++|+++|++++.
T Consensus 76 ~~------~~~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 76 AR------NGHLEVVKLLLEAGADVNA 96 (126)
T ss_dssp HH------TTCHHHHHHHHHTTCCTTC
T ss_pred HH------cChHHHHHHHHHcCCCCcc
Confidence 98 8999999999999999843
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.67 E-value=7.9e-17 Score=160.26 Aligned_cols=98 Identities=22% Similarity=0.285 Sum_probs=93.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHC-CCCCcccCCCCCCHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDA-SADVNSVDAYGNRPA 151 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~-GAdin~~D~~G~TPL 151 (705)
+..|.||||+||..|+.++|++||+.| +++|.. +..|+||||+|+..|+ .++|++||+. |++++.+|..|+|||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~-~~~g~t~L~~A~~~~~---~~~v~~Ll~~~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNR-VGVNGL-DKAGSTALYWACHGGH---KDIVEMLFTQPNIELNQQNKLGDTAL 144 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTT-CCTTCC-CTTSCCHHHHHHHTTC---HHHHHHHTTSTTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccCcHHHHHHHHhCC-CCcccc-CCCCCCHHHHHHHcCC---HHHHHHHHcCCCCCccccCCCCCCHH
Confidence 567899999999999999999999999 999998 9999999999999999 9999999999 999999999999999
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCCCCCc
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSGTGCV 181 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Gadi~~ 181 (705)
|+|+. .++.+++++||++|++++.
T Consensus 145 ~~A~~------~~~~~~v~~Ll~~ga~~~~ 168 (222)
T 3ehr_A 145 HAAAW------KGYADIVQLLLAKGARTDL 168 (222)
T ss_dssp HHHHH------HTCHHHHHHHHHHTCCSCC
T ss_pred HHHHH------cCCHHHHHHHHHcCCCCcc
Confidence 99998 8999999999999999943
No 102
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=2e-16 Score=141.15 Aligned_cols=93 Identities=35% Similarity=0.527 Sum_probs=85.5
Q ss_pred CccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCC
Q 005270 69 SRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGN 148 (705)
Q Consensus 69 s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~ 148 (705)
...++.+|.|+||+|+..|+.+++++|++.| +++|.. +..|.||||+|+..|+ .+++++|+++|++++.+|..|+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~-d~~g~tpLh~A~~~~~---~~~v~~Ll~~ga~~~~~d~~g~ 91 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAK-DKNGSTPLHLAARNGH---LEVVKLLLEAGADVXAQDKFGK 91 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCC-CTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCcc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCccccccCCC
Confidence 3455789999999999999999999999999 999998 9999999999999999 9999999999999999999999
Q ss_pred CHHHHHHhhCccCCCChHHHHHHH
Q 005270 149 RPADLIAKNCNLGFNSRKKVLQAL 172 (705)
Q Consensus 149 TPLh~Aa~~~~~~~~g~~eivelL 172 (705)
||||+|+. .++.+++++|
T Consensus 92 tpl~~A~~------~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISID------NGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHH------HTCHHHHHHH
T ss_pred cHHHHHHH------cCCHHHHHHh
Confidence 99999998 8999999987
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.66 E-value=5.8e-16 Score=133.39 Aligned_cols=92 Identities=36% Similarity=0.497 Sum_probs=84.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACG 108 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d 108 (705)
+.++|+.|+..|+.+.++.++. .|+++|..+ ..|+||||+|+..|+.+++++|++.| ++++.+ +
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~g~~~n~~d-------------~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~-d 65 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNAKD-------------KNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAK-D 65 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC-C
T ss_pred CCcHHHHHHHcCCHHHHHHHHH-cCCCCcccC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcc-C
Confidence 5688999999999887776665 899999997 89999999999999999999999999 999998 9
Q ss_pred CCCChHHHHHHhCCCCChHHHHHHHHHCCCC
Q 005270 109 SDGVTALHCAASGGSANSVEVVKLLLDASAD 139 (705)
Q Consensus 109 ~~G~TpLH~Aa~~G~~~~~eivklLL~~GAd 139 (705)
.+|.||||+|+..|+ .+++++|+++||+
T Consensus 66 ~~g~t~l~~A~~~~~---~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 66 KNGRTPLHLAARNGH---LEVVKLLLEAGAY 93 (93)
T ss_dssp TTSCCHHHHHHHTTC---HHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHcCC---HHHHHHHHHcCCC
Confidence 999999999999999 9999999999986
No 104
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.65 E-value=1e-16 Score=151.16 Aligned_cols=99 Identities=22% Similarity=0.192 Sum_probs=92.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCC-HH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNR-PA 151 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~T-PL 151 (705)
+..|.||||+|+..|+.++|++|+++| +++|.. +..|.||||+|+ .|+ .+++++|+++|++++.+|..|.| ||
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~-~~~g~t~L~~A~-~~~---~~~v~~Ll~~g~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAG-ANPNAP-NSYGRRPIQVMM-MGS---ARVAELLLLHGAEPNCADPATLTRPV 82 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTT-CCTTCC-CSSSCCTTTSSC-TTC---HHHHHHHHTTTCCCCCCCTTTCCCHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcC-CCCCCC-CCCCCCHHHHHH-cCC---HHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 478999999999999999999999999 999998 999999999985 788 99999999999999999999999 99
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+|+. .++.+++++|+++|++++..+
T Consensus 83 ~~A~~------~~~~~~v~~Ll~~ga~~~~~d 108 (156)
T 1bi7_B 83 HDAAR------EGFLDTLVVLHRAGARLDVRD 108 (156)
T ss_dssp HHHHH------HTCHHHHHHHHHHTCCSSCCC
T ss_pred HHHHH------CCCHHHHHHHHHcCCCCcccC
Confidence 99998 899999999999999995544
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.64 E-value=1.8e-16 Score=141.43 Aligned_cols=105 Identities=28% Similarity=0.371 Sum_probs=95.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccccc
Q 005270 28 YNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRAC 107 (705)
Q Consensus 28 ~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~ 107 (705)
++.++|+.|+..++.+.++.+|. .|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d-------------~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~- 71 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLS-KGADVNARS-------------KDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNAR- 71 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTT-TTCCSSCCC-------------SSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcC-------------CCCCCHHHHHHHcCcHHHHHHHHHcC-CCCccc-
Confidence 46789999999999988876665 899999887 89999999999999999999999999 999998
Q ss_pred CCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHH
Q 005270 108 GSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPA 151 (705)
Q Consensus 108 d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPL 151 (705)
+..|.||||+|+..|+ .+++++|+++|+++|..+..|.+|-
T Consensus 72 d~~g~tpl~~A~~~~~---~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 72 SKDGNTPEHLAKKNGH---HEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CTTCCCTTHHHHTTTC---HHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCCCCHHHHHHHCCC---HHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999 9999999999999999999999874
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=5.3e-16 Score=150.31 Aligned_cols=99 Identities=29% Similarity=0.308 Sum_probs=92.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCCCCHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYGNRPA 151 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G~TPL 151 (705)
+.+|.||||+|+..|+.+++++|++ + +++|.. +..|+||||+|+..|+ .+++++|+++|++++.+| ..|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~-d~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D-RDVDAV-DENGRTALLFVAGLGS---DKCVRLLAEAGADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T-SCTTCC-CTTSCCHHHHHHHHTC---HHHHHHHHHTTCCTTCCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c-CCCCCc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 4578999999999999999999999 7 999998 9999999999999999 999999999999999998 8999999
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+|+. .++.+++++|+++|++++..+
T Consensus 115 ~~A~~------~~~~~~v~~Ll~~ga~~~~~d 140 (183)
T 3deo_A 115 HMAAG------YVRPEVVEALVELGADIEVED 140 (183)
T ss_dssp HHHHH------TTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHh------cCcHHHHHHHHHcCCCCcCCC
Confidence 99998 899999999999999994433
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.60 E-value=1e-15 Score=155.75 Aligned_cols=99 Identities=29% Similarity=0.308 Sum_probs=93.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccC-CCCCCHH
Q 005270 73 GFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVD-AYGNRPA 151 (705)
Q Consensus 73 ~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D-~~G~TPL 151 (705)
+.+|.||||+|+..|+.++|++||+ + +++|.. +..|+||||+|+..|+ .++|++||++|++++.+| ..|+|||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~-~~~~~~-d~~g~t~L~~A~~~g~---~~~v~~Ll~~ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-D-RDVDAV-DENGRTALLFVAGLGS---DKCVRLLAEAGADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-T-CCTTCB-CTTSCBHHHHHHHHTC---HHHHHHHHHTTCCTTCCCSSSCCCHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-C-CCCCCc-CCCCCCHHHHHHHCCC---HHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 3578999999999999999999999 8 999998 9999999999999999 999999999999999998 8899999
Q ss_pred HHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 152 DLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 152 h~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
|+|+. .++.+++++|+++|++++..+
T Consensus 116 ~~A~~------~g~~~~v~~Ll~~ga~~~~~d 141 (244)
T 3ui2_A 116 HMAAG------YVRPEVVEALVELGADIEVED 141 (244)
T ss_dssp HHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHH------cCCHHHHHHHHHCCCCCCCCC
Confidence 99998 899999999999999995444
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.53 E-value=1e-15 Score=167.01 Aligned_cols=126 Identities=13% Similarity=0.052 Sum_probs=102.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC---ccc
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD---VNR 105 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD---Vn~ 105 (705)
..++|+.||..|+.+.++.+|. .|......+ ..+..|.||||+||.+|+.++|++|+++| +| ++.
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~-~ga~~~~~~----------~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i 159 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCL-LLTSDEIVK----------VIQAENYQAFRLAAENGHLHVLNRLCELA-PTEIMAMI 159 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTT-C--CCSSCC------------CHHHHHHHHHHHHTTCHHHHHHHHHSC-TTTHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHH-cCCcHHHHH----------HhccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcccccc
Confidence 3488899999999988877776 666221111 01246789999999999999999999999 76 233
Q ss_pred ccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcc--cCCCCCCHHHHHH-hhCccCCCChHHHHHHHHhCCC
Q 005270 106 ACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNS--VDAYGNRPADLIA-KNCNLGFNSRKKVLQALLKGSG 177 (705)
Q Consensus 106 ~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~--~D~~G~TPLh~Aa-~~~~~~~~g~~eivelLL~~Ga 177 (705)
. +.+ .||||+|+..|+ .++|++|+++|++++. .|..|.||||+|+ . .|+.+++++|+++|+
T Consensus 160 ~-~~~-~TpLh~Aa~~G~---~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~------~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 160 Q-AEN-YHAFRLAAENGH---LHVLNRLCELAPTEATAMIQAENYYAFRWAAVG------RGHHNVINFLLDCPV 223 (376)
T ss_dssp S-HHH-HHHHHHHHHTTC---HHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST------TCCHHHHHHHTTSHH
T ss_pred C-CCC-CCHHHHHHHCCC---HHHHHHHHHcCCccchhccCCCCCCHHHHHHHH------CCCHHHHHHHHhCCC
Confidence 2 223 999999999999 9999999999999988 8999999999999 8 999999999999764
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.52 E-value=8.9e-15 Score=154.36 Aligned_cols=106 Identities=21% Similarity=0.170 Sum_probs=89.9
Q ss_pred cCcchHHHHHHHHh---CCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Q 005270 26 LCYNFSILLELTAS---DDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVD 102 (705)
Q Consensus 26 ~~~~~s~LL~aAa~---gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aD 102 (705)
...+.++|+.|+.. ++.+.+ ++|++.|+++|..+ ..|+||||+|+..|+.++|++||++| +|
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv-~~Ll~~gadvn~~d-------------~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad 251 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLV-DFIIQNGGHLDAKA-------------ADGNTALHYAALYNQPDCLKLLLKGR-AL 251 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHH-HHHHHHSSCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred CCCCccHHHHHHHhcccCcHHHH-HHHHhcCCCCCCCC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 34566888888876 555544 55555899999987 89999999999999999999999999 99
Q ss_pred cccccCCCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHh
Q 005270 103 VNRACGSDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAK 156 (705)
Q Consensus 103 Vn~~~d~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~ 156 (705)
++.+ |.+|.||||+|+..|+ .+++++|+++|++ .|.||||+|+.
T Consensus 252 ~~~~-d~~G~TpL~~A~~~~~---~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 252 VGTV-NEAGETALDIARKKHH---KECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp CSCC-CTTSCCHHHHHHHHTC---HHHHHHHHHHHHH------TTSSCCC----
T ss_pred CCCc-CCCCCCHHHHHHHcCC---HHHHHHHHHhcCC------CCCChhHHHHh
Confidence 9998 9999999999999999 9999999999986 58999999987
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.48 E-value=9.8e-14 Score=155.99 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=98.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCcccc-----cCCCCChHHHHHHh---CCCCChHHHHHHHHHCCCCCcccCCCC
Q 005270 76 ERTPLMIASMFGSKDVVSYVIKSGHVDVNRA-----CGSDGVTALHCAAS---GGSANSVEVVKLLLDASADVNSVDAYG 147 (705)
Q Consensus 76 G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~-----~d~~G~TpLH~Aa~---~G~~~~~eivklLL~~GAdin~~D~~G 147 (705)
..+.||.|+..|++++|+.||+.| +|+|.. .+..|.||||+|+. .|+ .++|++||++|+|+|.+|.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g-~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~---~~~v~~Ll~~ga~vn~~d~~g 207 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANG-QDFGQPLPGPDAQAPEELVLHLAVKVANQAS---LPLVDFIIQNGGHLDAKAADG 207 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTT-CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTT---HHHHHHHHHHSCCTTCCCSSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhhc-ccccCCCCCcccccccchHHHHHHHhccccc---HHHHHHHHHcCCCCCccCCCC
Confidence 347899999999999999999999 999864 26789999999976 777 999999999999999999999
Q ss_pred CCHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccccccchhhHHHHHHhhcCCCCccchhccccccccCCCcccc
Q 005270 148 NRPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEIDNLCDQVVYKMEEQEQPEISTPRVLKDGAEKKEYPVDLT 223 (705)
Q Consensus 148 ~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~~~~~~~~~~~~l~~e~~~~~~~~ll~~~~~kke~Pldla 223 (705)
+||||+|+. .++.+++++||++|++++..+.. +.++ .++....+.......|+..+.+...+|+++.
T Consensus 208 ~TpLh~A~~------~g~~~~v~~Ll~~ga~~~~~d~~--g~tp-l~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~ 274 (497)
T 3lvq_E 208 NTALHYAAL------YNQPDCLKLLLKGRALVGTVNEA--GETA-LDIARKKHHKECEELLEQAQAGTFAFPLHVD 274 (497)
T ss_dssp CCHHHHHTT------TTCHHHHHHHHHTCCCCSCCCTT--CCCH-HHHHHHTTCHHHHHHHHHTCC----------
T ss_pred CcHHHHHHH------cCCHHHHHHHHHcCCCCCCcCCC--CCCH-HHHHHHcCCHHHHHHHHHhCCCCCCCcceee
Confidence 999999988 89999999999999999555432 2222 2222222222223344445555555555544
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.46 E-value=1.1e-13 Score=150.67 Aligned_cols=100 Identities=23% Similarity=0.233 Sum_probs=92.7
Q ss_pred CCCChHHHHHHHc-CCHHHHHHHHHcCCCCcccccC--CCCChHHHHHHhCCCCChHHHHHHHHHCCCCCcccCCCCCCH
Q 005270 74 FEERTPLMIASMF-GSKDVVSYVIKSGHVDVNRACG--SDGVTALHCAASGGSANSVEVVKLLLDASADVNSVDAYGNRP 150 (705)
Q Consensus 74 ~~G~TPLh~AA~~-G~~~vVk~LL~~G~aDVn~~~d--~~G~TpLH~Aa~~G~~~~~eivklLL~~GAdin~~D~~G~TP 150 (705)
..+.|+||+|+.. |++++|++||+.| +|+|.. + ..|.||||+|+..|+ .++|++||++|+++|..|..|+||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~G-advn~~-~~~~~g~TpLh~Aa~~g~---~~iv~~LL~~Gadvn~~d~~G~Tp 271 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHG-ADVNWV-NGGQDNATPLIQATAANS---LLACEFLLQNGANVNQADSAGRGP 271 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTT-CCTTCC-CTTTTCCCHHHHHHHTTC---HHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcC-CCCCcc-ccccCCCCHHHHHHHCCC---HHHHHHHHHcCCCCCCCCCCCCCH
Confidence 3456899999999 9999999999999 999987 6 889999999999999 999999999999999999999999
Q ss_pred HHHHHhhCccCCCChHHHHHHHHhCCCCCCcccc
Q 005270 151 ADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEEI 184 (705)
Q Consensus 151 Lh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~~ 184 (705)
||+|+. .++.+++++||++|++++..+.
T Consensus 272 Lh~A~~------~g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 272 LHHATI------LGHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp HHHHHH------HTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHH------cCcHHHHHHHHHCcCCCCCcCC
Confidence 999998 8999999999999999955443
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.44 E-value=4.2e-13 Score=119.43 Aligned_cols=88 Identities=25% Similarity=0.345 Sum_probs=80.2
Q ss_pred CcchHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCcccc
Q 005270 27 CYNFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNRA 106 (705)
Q Consensus 27 ~~~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~ 106 (705)
.++.++|+.|+..|+.+.++.+|. .|+++|..+ ..|+||||+|+..|+.+++++|+++| ++++.+
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~i~~~d-------------~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~ 86 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMA-NGADVAAKD-------------KNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQ 86 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCC-------------TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred CccchHHHHHHHcCCHHHHHHHHH-cCCCCCccC-------------CCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccc
Confidence 345688999999999988877775 799999987 89999999999999999999999999 999998
Q ss_pred cCCCCChHHHHHHhCCCCChHHHHHHH
Q 005270 107 CGSDGVTALHCAASGGSANSVEVVKLL 133 (705)
Q Consensus 107 ~d~~G~TpLH~Aa~~G~~~~~eivklL 133 (705)
+..|.||||+|+..|+ .+++++|
T Consensus 87 -d~~g~tpl~~A~~~~~---~~~~~~L 109 (110)
T 2zgd_A 87 -DKFGKTAFDISIDNGN---EDLAEIL 109 (110)
T ss_dssp -CTTSCCHHHHHHHHTC---HHHHHHH
T ss_pred -ccCCCcHHHHHHHcCC---HHHHHHh
Confidence 9999999999999999 9999987
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.42 E-value=3.8e-13 Score=140.12 Aligned_cols=97 Identities=20% Similarity=0.217 Sum_probs=88.0
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCccccc-----CCCCChHHHHHHhC---CCCChHHHHHHHHHCCCCCcccCCCCC
Q 005270 77 RTPLMIASMFGSKDVVSYVIKSGHVDVNRAC-----GSDGVTALHCAASG---GSANSVEVVKLLLDASADVNSVDAYGN 148 (705)
Q Consensus 77 ~TPLh~AA~~G~~~vVk~LL~~G~aDVn~~~-----d~~G~TpLH~Aa~~---G~~~~~eivklLL~~GAdin~~D~~G~ 148 (705)
.++|+.|+..|+++.++.+++.| ++++... +..|.||||+|+.. |+ .+++++|+++|+++|.+|..|+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g-~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~---~~~v~~Ll~~ga~in~~d~~g~ 206 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTS---LHIVDFLVQNSGNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTT---HHHHHHHHHHCSCTTCCCTTCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhh-cchhhhccccccccCCCCcchHHHHhcccch---HHHHHHHHHCCCCccccCCCCC
Confidence 47899999999999999999999 8855332 77899999999999 66 9999999999999999999999
Q ss_pred CHHHHHHhhCccCCCChHHHHHHHHhCCCCCCccc
Q 005270 149 RPADLIAKNCNLGFNSRKKVLQALLKGSGTGCVEE 183 (705)
Q Consensus 149 TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi~~~~ 183 (705)
||||+|+. .++.+++++||++|++++..+
T Consensus 207 TpLh~A~~------~g~~~~v~~Ll~~gad~~~~d 235 (278)
T 1dcq_A 207 TALHYCCL------TDNAECLKLLLRGKASIEIAN 235 (278)
T ss_dssp CHHHHHHH------TTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHH------cCCHHHHHHHHHcCCCCCCcc
Confidence 99999998 899999999999999995544
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.39 E-value=1e-14 Score=159.15 Aligned_cols=121 Identities=13% Similarity=0.052 Sum_probs=100.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhcCCCCcccCccccccccCccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCccc--c
Q 005270 29 NFSILLELTASDDLDGFRKAIEEDGHDIDESGLWYGRIIGSRKMGFEERTPLMIASMFGSKDVVSYVIKSGHVDVNR--A 106 (705)
Q Consensus 29 ~~s~LL~aAa~gd~~~v~~lL~e~Gadvn~~dlwyg~~~~s~~~~~~G~TPLh~AA~~G~~~vVk~LL~~G~aDVn~--~ 106 (705)
+.++|+.||..|+.+.++.++. .|++++..+. + +.. .||||+||..|+.++|++|+++| ++++. .
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~-~gad~~~~~i--------~--~~~-~TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~~~~ 194 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCE-LAPTEIMAMI--------Q--AEN-YHAFRLAAENGHLHVLNRLCELA-PTEATAMI 194 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH-SCTTTHHHHH--------S--HHH-HHHHHHHHHTTCHHHHHHHHHSC-GGGHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-CCCCcccccc--------C--CCC-CCHHHHHHHCCCHHHHHHHHHcC-Cccchhcc
Confidence 4468888888888877766655 8876332210 0 022 89999999999999999999999 99886 6
Q ss_pred cCCCCChHHHHHH-hCCCCChHHHHHHHHHCCCCCcccCCCCCCHHHHHHhhCccCCCChHHHHHHHHhCCCCC
Q 005270 107 CGSDGVTALHCAA-SGGSANSVEVVKLLLDASADVNSVDAYGNRPADLIAKNCNLGFNSRKKVLQALLKGSGTG 179 (705)
Q Consensus 107 ~d~~G~TpLH~Aa-~~G~~~~~eivklLL~~GAdin~~D~~G~TPLh~Aa~~~~~~~~g~~eivelLL~~Gadi 179 (705)
+..|.||||+|+ ..|+ .++|++|++.|++ |.||||+|+. .|+.+++++|+++|+++
T Consensus 195 -d~~g~TpL~~Aa~~~G~---~eiv~~Ll~~ga~-------~~taL~~Aa~------~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 195 -QAENYYAFRWAAVGRGH---HNVINFLLDCPVM-------LAYAEIHEFE------YGEKYVNPFIARHVNRL 251 (376)
T ss_dssp -HHHHHHHHHHHHSTTCC---HHHHHHHTTSHHH-------HHHHHHCTTT------TTTTTHHHHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHHCCC---HHHHHHHHhCCCc-------cchHHHHHHH------CCCHHHHHHHHhcCccc
Confidence 778999999999 9999 9999999998753 8899999987 89999999999999877
No 115
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=99.00 E-value=1.1e-10 Score=98.66 Aligned_cols=60 Identities=38% Similarity=0.884 Sum_probs=29.2
Q ss_pred cccccCCCCc-cCCCCCCCCCcccCCCcccccc---CCcccccccCCCC---CCCCCCc-cccCCCCCC
Q 005270 276 HYSCVPCPEF-RKGSCRQGDACEYAHGIFECWL---HPAQYRTRLCKDE---TNCNRRV-CFFAHKPEE 336 (705)
Q Consensus 276 ~Y~~~~Cp~f-~kg~C~~Gd~C~~aHg~~E~~~---hP~~ykT~~C~~~---~~C~~~~-C~FaH~~~e 336 (705)
.|++.+|+.| .+|.|++|+.|.|+|+..|++. || .|||.+|+.| |.|+++. |.|+|+.+|
T Consensus 9 ~~kt~~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~-~~k~~~C~~f~~~G~C~~G~~C~f~H~~~e 76 (77)
T 1m9o_A 9 RYKTELCRTYSESGRCRYGAKCQFAHGLGELRQANRHP-KYKTELCHKFKLQGRCPYGSRCHFIHNPTE 76 (77)
T ss_dssp CCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGGGTC----------------------------------
T ss_pred CccchhCHHhhhCCCcCCCCCccCCCCChhhccccccc-cccCCcccchhhCcCCCCcCcCCCCCCCCC
Confidence 5899999999 5899999999999999999875 44 7999999976 8899976 999999877
No 116
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=98.63 E-value=3.4e-09 Score=88.26 Aligned_cols=62 Identities=26% Similarity=0.679 Sum_probs=56.3
Q ss_pred cccCCCCccCCCCCCCC-CcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCcCC
Q 005270 278 SCVPCPEFRKGSCRQGD-ACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEELRP 339 (705)
Q Consensus 278 ~~~~Cp~f~kg~C~~Gd-~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr~ 339 (705)
+.+.|++|.+|.|.+|+ .|.|+|...+.+.++..+++..|.+| |.|.++.|.|.|.+.+|+.
T Consensus 5 k~~vC~~f~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flkG~C~r~~C~y~H~~~~L~~ 69 (70)
T 3d2q_A 5 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQA 69 (70)
T ss_dssp EEEBCHHHHTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHTTCCCCTTCCSBCCCHHHHC
T ss_pred cchhCHHHhcCCCCCCCCCCCCccCcccccccccCCcceeccccCcCCCCCCCcCeeCCHHHHhc
Confidence 34589999999999999 59999999999988889999999998 9999999999999988763
No 117
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=98.13 E-value=1.2e-06 Score=77.51 Aligned_cols=49 Identities=31% Similarity=0.632 Sum_probs=43.4
Q ss_pred cccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC---CCCCCCc-cccCCCCCC
Q 005270 276 HYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE---TNCNRRV-CFFAHKPEE 336 (705)
Q Consensus 276 ~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~---~~C~~~~-C~FaH~~~e 336 (705)
.++..+|+.|.+|.|.+|+.|.|+|. +.+|+.| |.|+++. |.|+|....
T Consensus 10 ~~k~~lC~~f~~G~C~~G~~C~f~H~------------~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 10 PKKRELCKFYITGFCARAENCPYMHG------------DFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp SCCCSBCTTTTTTCCSCSTTCSSBSS------------SSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred CCCCccCcccccCcCCCCCCCCCCCC------------CCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 47888999999999999999999999 6779977 8999976 999998653
No 118
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1.6e-07 Score=83.10 Aligned_cols=63 Identities=27% Similarity=0.652 Sum_probs=55.6
Q ss_pred ccccCCCCccCCCCCCCC-CcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCcCC
Q 005270 277 YSCVPCPEFRKGSCRQGD-ACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEELRP 339 (705)
Q Consensus 277 Y~~~~Cp~f~kg~C~~Gd-~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr~ 339 (705)
.+.+.|++|..|.|.+|+ .|.|+|...+....+...++..|.+| |.|.++.|.|.|.+.+|+.
T Consensus 18 ~k~~VCr~FlrG~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~flkG~C~r~~C~y~H~~~~l~~ 83 (98)
T 2e5s_A 18 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHLQA 83 (98)
T ss_dssp SEEEBCSHHHHTCCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHHHTCCCCTTCCSBCCCHHHHH
T ss_pred hhhhhhHHHhcCcCCCCCCCCCCcCCchhccccccCCccccchhhccCCCCCCCcCccCChHHHHH
Confidence 345689999999999999 79999999888777777888899999 9999999999999988763
No 119
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.01 E-value=2.7e-06 Score=71.98 Aligned_cols=60 Identities=25% Similarity=0.489 Sum_probs=48.9
Q ss_pred cCCcccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC---CCCCCCccccCCCCCCcCC
Q 005270 273 RKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE---TNCNRRVCFFAHKPEELRP 339 (705)
Q Consensus 273 r~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~---~~C~~~~C~FaH~~~elr~ 339 (705)
..-.++.+.|..|.+|.|.+|+.|.|+|...+ -++..|+.| +.|....|.|.|...+.+.
T Consensus 4 ~~~~~k~~~C~~fl~G~C~~G~~C~fsH~~~~-------~~~~~C~~f~~~G~C~~~~C~f~H~~~~~~~ 66 (77)
T 2d9n_A 4 GSSGEKTVVCKHWLRGLCKKGDQCEFLHEYDM-------TKMPECYFYSKFGECSNKECPFLHIDPESKI 66 (77)
T ss_dssp CCSCCTTSBCHHHHTTCCSCTTSSSSBCSCCT-------TTSCBCHHHHHTCCCCCSSCSSBCCCTTSSC
T ss_pred CCCCCcceeCHhHccCcCCCCCCCCCcccccc-------CcCCCCcccCCCCccCCCCeeccCCCccccC
Confidence 34457888999999999999999999999654 256679988 8999667999998866543
No 120
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=97.80 E-value=4.4e-06 Score=69.76 Aligned_cols=56 Identities=27% Similarity=0.559 Sum_probs=45.4
Q ss_pred cccccCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCC---CCCCCCccccCCCCCCcC
Q 005270 276 HYSCVPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE---TNCNRRVCFFAHKPEELR 338 (705)
Q Consensus 276 ~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~---~~C~~~~C~FaH~~~elr 338 (705)
.++...|..|.+|.|.+|+.|.|+|.... .++.+|+.| +.|.+..|.|.|...+.|
T Consensus 13 ~~k~~vCk~fl~G~C~~G~~C~fsH~~~~-------~~~~~C~~f~~~G~C~~~~C~y~H~~p~~k 71 (72)
T 2rhk_C 13 GEKTVVCKHWLRGLCKKGDQCEFLHEYDM-------TKMSECYFYSKFGECSNKECPFLHIDPESK 71 (72)
T ss_dssp CCCCSBCHHHHTTCCCCGGGSSSBCSCCT-------TSCCBCHHHHHHSCCSBTTCCSBCCCCC--
T ss_pred CCcCeeCHHHhcCCCCCCCCCCCcccccc-------ccCCcccccCCCCCCCCCCeeccCCCcccc
Confidence 36677999999999999999999999532 367789986 899997799999876544
No 121
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=6.2e-06 Score=67.67 Aligned_cols=50 Identities=26% Similarity=0.569 Sum_probs=38.9
Q ss_pred ccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCcccccc---CCcccccccCCC
Q 005270 267 ARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECWL---HPAQYRTRLCKD 319 (705)
Q Consensus 267 ~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~---hP~~ykT~~C~~ 319 (705)
|.-|.|.. .| .+|..|.+|.|++|+.|.||||..|+.- .+...++++|+.
T Consensus 11 W~~R~P~~-k~--~LC~~~~~G~C~~G~~C~FAHG~~ELr~~~~R~~~~k~k~~~A 63 (69)
T 2d9m_A 11 WQHRFPTG-YF--SICDRYMNGTCPEGNSCKFAHGNAELHEWEERRDALKMKLNKA 63 (69)
T ss_dssp CCCCCCCS-CC--SBCHHHHHSCCSSCSSCSSBSSHHHHHHHHHHHHHHTTTCCSC
T ss_pred ccccCCCC-Cc--ccCcccCcCCCCCCCccCCcCCHHHHhhHHHHHHHHHHHHHHH
Confidence 44444432 33 7999998899999999999999999876 466678888874
No 122
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=97.48 E-value=2.6e-05 Score=66.91 Aligned_cols=61 Identities=31% Similarity=0.730 Sum_probs=48.0
Q ss_pred ccccCCCCccCCCCCCCC-CcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCcCC
Q 005270 277 YSCVPCPEFRKGSCRQGD-ACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEELRP 339 (705)
Q Consensus 277 Y~~~~Cp~f~kg~C~~Gd-~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr~ 339 (705)
.+.+.|++|..|.|.+|| .|.|+|........ ..+...|.+| |.|.++.|.|.|.+..+..
T Consensus 7 ~~~~VCr~FlrG~C~r~d~~C~f~H~~~~~~~~--~~~~~vC~dflkG~C~r~~C~y~H~~~~l~~ 70 (83)
T 3d2n_A 7 LTLEVCREFQRGTCSRPDTECKFAHPSKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPPHLKT 70 (83)
T ss_dssp GEEEBCTTGGGTCCCSCTTTCSSBCCCTTCCEE--TTEEECCHHHHTTCCCCSSCSSCCCCHHHHH
T ss_pred ccchhcHHHhcCCCCCCCCCCCCcCCCcccccc--CCceeehhHhhhccccCCCcceeCChHHHHH
Confidence 344589999999999997 99999997543211 2345569999 9999999999999887653
No 123
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.27 E-value=2.7e-05 Score=63.90 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=25.2
Q ss_pred cccccCCCC--CCCCCCc-cccCCCCCCcCC
Q 005270 312 YRTRLCKDE--TNCNRRV-CFFAHKPEELRP 339 (705)
Q Consensus 312 ykT~~C~~~--~~C~~~~-C~FaH~~~elr~ 339 (705)
.++++|+.| |.|+++. |.|||+.+|||.
T Consensus 18 ~k~~LC~~~~~G~C~~G~~C~FAHG~~ELr~ 48 (69)
T 2d9m_A 18 GYFSICDRYMNGTCPEGNSCKFAHGNAELHE 48 (69)
T ss_dssp SCCSBCHHHHHSCCSSCSSCSSBSSHHHHHH
T ss_pred CCcccCcccCcCCCCCCCccCCcCCHHHHhh
Confidence 466999997 8999987 999999999996
No 124
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=97.21 E-value=5.4e-05 Score=65.71 Aligned_cols=59 Identities=31% Similarity=0.743 Sum_probs=47.0
Q ss_pred cccCCCCccCCCCCCCC-CcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCCcC
Q 005270 278 SCVPCPEFRKGSCRQGD-ACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEELR 338 (705)
Q Consensus 278 ~~~~Cp~f~kg~C~~Gd-~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~elr 338 (705)
+.+.|++|.+|.|.+|+ .|.|+|........+ -+...|.+| |.|.+..|.|.|.+..|.
T Consensus 16 ~~~VCrdFlrG~C~r~d~~CrfsH~~~~~~v~~--~~~~vC~dflkG~C~r~~Cky~H~~~hl~ 77 (89)
T 2rpp_A 16 TLEVCRQFQRGTCSRSDEECKFAHPPKSCQVEN--GRVIACFDSLKGRCSRENCKYLHPPTHLK 77 (89)
T ss_dssp EECBCHHHHHTCCCCCTTTSSSBCCCSSSCCBT--TBEEBCHHHHHTCCCCTTCCSBCCCHHHH
T ss_pred hhhhchHHhcCCCCCCCCCCCCcCCCccccccC--CceeeehhhhhCcCCCCCcceecCHHHHH
Confidence 34589999999999998 999999975432222 245569999 999999999999987654
No 125
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.80 E-value=0.0006 Score=57.06 Aligned_cols=54 Identities=26% Similarity=0.518 Sum_probs=13.4
Q ss_pred ccCCCCcccccccCCCCccCCCCcCCcccccCCCCc-cCCCCCCCCCcccCCCccc
Q 005270 250 AYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEF-RKGSCRQGDACEYAHGIFE 304 (705)
Q Consensus 250 a~shD~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f-~kg~C~~Gd~C~~aHg~~E 304 (705)
+.+.....|.|.|..+..+. ....-.|++.+|+.| ..|.|++|+.|.|+|+..|
T Consensus 22 G~C~~G~~C~f~H~~~e~~~-~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~e 76 (77)
T 1m9o_A 22 GRCRYGAKCQFAHGLGELRQ-ANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPTE 76 (77)
T ss_dssp SCCTTTTTCSSCSSSCCGGG-TC---------------------------------
T ss_pred CCcCCCCCccCCCCChhhcc-ccccccccCCcccchhhCcCCCCcCcCCCCCCCCC
Confidence 34555678999998754332 222235788899987 5799999999999999766
No 126
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=93.30 E-value=0.069 Score=46.92 Aligned_cols=39 Identities=28% Similarity=0.847 Sum_probs=30.6
Q ss_pred ccCCCCcccccccCCCCccCCCCcCCcccccCCCCc-cCCCCCCCCCcccCCCcc
Q 005270 250 AYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEF-RKGSCRQGDACEYAHGIF 303 (705)
Q Consensus 250 a~shD~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f-~kg~C~~Gd~C~~aHg~~ 303 (705)
+.+.....|+|.|. ...|+.| .+|.|++|+.|.|.|...
T Consensus 22 G~C~~G~~C~f~H~---------------~~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 22 GFCARAENCPYMHG---------------DFPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp TCCSCSTTCSSBSS---------------SSBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred CcCCCCCCCCCCCC---------------CCcCcCcccCCcCCCCCCCcccCCCC
Confidence 33444557888886 4689999 689999999999999953
No 127
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.44 E-value=0.079 Score=44.33 Aligned_cols=54 Identities=22% Similarity=0.447 Sum_probs=39.2
Q ss_pred cccCCCCcccccccCCCCccCCCCcCCcccccCCCCccC-CCCCCCCCcccCCCccccccCCcccccccCCCC
Q 005270 249 RAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRK-GSCRQGDACEYAHGIFECWLHPAQYRTRLCKDE 320 (705)
Q Consensus 249 ra~shD~teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~k-g~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~ 320 (705)
++.+.....|.|.|..... +...|..|.+ |.|. |+.|.|.|...+ .++..|.+|
T Consensus 18 ~G~C~~G~~C~fsH~~~~~----------~~~~C~~f~~~G~C~-~~~C~f~H~~~~-------~~~~~C~~f 72 (77)
T 2d9n_A 18 RGLCKKGDQCEFLHEYDMT----------KMPECYFYSKFGECS-NKECPFLHIDPE-------SKIKDCPWS 72 (77)
T ss_dssp TTCCSCTTSSSSBCSCCTT----------TSCBCHHHHHTCCCC-CSSCSSBCCCTT-------SSCSSSSCC
T ss_pred cCcCCCCCCCCCccccccC----------cCCCCcccCCCCccC-CCCeeccCCCcc-------ccCCCCccc
Confidence 3445555689999975421 2347999987 9999 899999999643 356778876
No 128
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=91.65 E-value=0.07 Score=43.85 Aligned_cols=53 Identities=21% Similarity=0.487 Sum_probs=37.1
Q ss_pred ccCCCCc-ccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCccccc
Q 005270 250 AYSHDWT-ECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECW 306 (705)
Q Consensus 250 a~shD~t-eCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~ 306 (705)
+.+.... +|+|.|+.+...- ..-.++...|.+|.+|.|.+| .|.|.|...++.
T Consensus 15 G~C~rg~~~C~f~H~~~~~~~---~~~~~~~~vC~~flkG~C~r~-~C~y~H~~~~L~ 68 (70)
T 3d2q_A 15 GNCNRGENDCRFAHPADSTMI---DTNDNTVTVCMDYIKGRCSRE-KCKYFHPPAHLQ 68 (70)
T ss_dssp TCCSSCTTTCSSBCCCTTSCC---BTTTTEEEBCHHHHTTCCCCT-TCCSBCCCHHHH
T ss_pred CCCCCCCCCCCCccCcccccc---cccCCcceeccccCcCCCCCC-CcCeeCCHHHHh
Confidence 3344444 5999997542111 122456779999999999999 999999976653
No 129
>2lhn_A Nuclear polyadenylated RNA-binding protein NAB2; nuclear protein; NMR {Saccharomyces cerevisiae S288C}
Probab=90.62 E-value=0.038 Score=46.78 Aligned_cols=40 Identities=28% Similarity=0.658 Sum_probs=27.2
Q ss_pred cCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCCCCCCCCccccCCC
Q 005270 280 VPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDETNCNRRVCFFAHK 333 (705)
Q Consensus 280 ~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~~~C~~~~C~FaH~ 333 (705)
..|+.... |.+ ..|.|.|. ....|+++..|.+..|.|.|-
T Consensus 32 ~~Cr~g~~--C~~-~~C~f~HP-----------~~~~Crf~~~C~n~~C~F~Hp 71 (80)
T 2lhn_A 32 IMCREGAN--CTR-IDCLFGHP-----------INEDCRFGVNCKNIYCLFRHP 71 (80)
Confidence 35555444 555 45667664 235798888999988999994
No 130
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.40 E-value=0.13 Score=45.19 Aligned_cols=54 Identities=24% Similarity=0.513 Sum_probs=38.0
Q ss_pred cccCCCCc-ccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCccccc
Q 005270 249 RAYSHDWT-ECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFECW 306 (705)
Q Consensus 249 ra~shD~t-eCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~~ 306 (705)
++.+.... +|+|.|+.+.... + .-......|.+|.+|.|.++ .|.|.|...++.
T Consensus 28 rG~C~rgd~~C~FsH~~~~~~~-~--~~~~~~~vC~~flkG~C~r~-~C~y~H~~~~l~ 82 (98)
T 2e5s_A 28 RGNCARGETDCRFAHPADSTMI-D--TSDNTVTVCMDYIKGRCMRE-KCKYFHPPAHLQ 82 (98)
T ss_dssp HTCCSSHHHHCSSBCCSSCCSC-C--TTTCEEEBCHHHHHTCCCCT-TCCSBCCCHHHH
T ss_pred cCcCCCCCCCCCCcCCchhccc-c--ccCCccccchhhccCCCCCC-CcCccCChHHHH
Confidence 34444444 6999998653221 1 12356679999999999999 999999986653
No 131
>2lhn_A Nuclear polyadenylated RNA-binding protein NAB2; nuclear protein; NMR {Saccharomyces cerevisiae S288C}
Probab=88.11 E-value=0.089 Score=44.50 Aligned_cols=41 Identities=29% Similarity=0.745 Sum_probs=32.9
Q ss_pred cCCCCccCCCCCCCCCcccCCCccccccCCcccccccCCCCCCCCCCccccCCC
Q 005270 280 VPCPEFRKGSCRQGDACEYAHGIFECWLHPAQYRTRLCKDETNCNRRVCFFAHK 333 (705)
Q Consensus 280 ~~Cp~f~kg~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~~~C~~~~C~FaH~ 333 (705)
+.|..+.. |.+ ..|.|.|... ..+|+++..|.+..|.|+|-
T Consensus 10 e~CKf~~~--Ctn-~~C~f~Hp~~----------~~~Cr~g~~C~~~~C~f~HP 50 (80)
T 2lhn_A 10 EQCKFGTH--CTN-KRCKYRHARS----------HIMCREGANCTRIDCLFGHP 50 (80)
Confidence 46766665 888 8999999642 34799999999999999994
No 132
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=85.88 E-value=0.29 Score=40.45 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=24.7
Q ss_pred CcccccccCCCC--CCCCCCc-cccCCCCCCcC
Q 005270 309 PAQYRTRLCKDE--TNCNRRV-CFFAHKPEELR 338 (705)
Q Consensus 309 P~~ykT~~C~~~--~~C~~~~-C~FaH~~~elr 338 (705)
...+++..|++| |.|.++. |.|+|.....+
T Consensus 11 ~~~~k~~vCk~fl~G~C~~G~~C~fsH~~~~~~ 43 (72)
T 2rhk_C 11 MSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTK 43 (72)
T ss_dssp SSCCCCSBCHHHHTTCCCCGGGSSSBCSCCTTS
T ss_pred CCCCcCeeCHHHhcCCCCCCCCCCCcccccccc
Confidence 456789999988 9999976 99999976544
No 133
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=80.51 E-value=0.86 Score=34.76 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=19.9
Q ss_pred cccccCCCC---CCCCCCc-cccCCCCC
Q 005270 312 YRTRLCKDE---TNCNRRV-CFFAHKPE 335 (705)
Q Consensus 312 ykT~~C~~~---~~C~~~~-C~FaH~~~ 335 (705)
.+|.+|..| |.|+++. |.|.|+.+
T Consensus 18 ~~~~iC~~FSayGwCp~G~~Cp~SHDiD 45 (50)
T 2fc6_A 18 HPTSICDNFSAYGWCPLGPQCPQSHDIS 45 (50)
T ss_dssp CCSCBCSHHHHTCCCTTGGGCSSBCCCC
T ss_pred cccchhhhccccccCCCCCCCCccccCC
Confidence 578889987 8899876 99999865
No 134
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=79.76 E-value=0.79 Score=38.92 Aligned_cols=50 Identities=26% Similarity=0.496 Sum_probs=34.4
Q ss_pred ccCCCC-cccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCcccc
Q 005270 250 AYSHDW-TECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFEC 305 (705)
Q Consensus 250 a~shD~-teCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E~ 305 (705)
+.+... .+|.|.|+..... .-.-....|-+|.+|.|.++ .|.|.|...++
T Consensus 18 G~C~r~d~~C~f~H~~~~~~-----~~~~~~~vC~dflkG~C~r~-~C~y~H~~~~l 68 (83)
T 3d2n_A 18 GTCSRPDTECKFAHPSKSCQ-----VENGRVIACFDSLKGRCSRE-NCKYLHPPPHL 68 (83)
T ss_dssp TCCCSCTTTCSSBCCCTTCC-----EETTEEECCHHHHTTCCCCS-SCSSCCCCHHH
T ss_pred CCCCCCCCCCCCcCCCcccc-----ccCCceeehhHhhhccccCC-CcceeCChHHH
Confidence 333334 3799999864211 11233458999999999998 99999997544
No 135
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=67.28 E-value=2 Score=36.92 Aligned_cols=49 Identities=24% Similarity=0.527 Sum_probs=33.8
Q ss_pred ccCCCCc-ccccccCCCCccCCCCcCCcccccCCCCccCCCCCCCCCcccCCCccc
Q 005270 250 AYSHDWT-ECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCRQGDACEYAHGIFE 304 (705)
Q Consensus 250 a~shD~t-eCp~~hp~E~~RRRdPr~y~Y~~~~Cp~f~kg~C~~Gd~C~~aHg~~E 304 (705)
+.+.... +|.|.|+......+ .-....|-+|.+|.|.++ .|.|.|....
T Consensus 26 G~C~r~d~~CrfsH~~~~~~v~-----~~~~~vC~dflkG~C~r~-~Cky~H~~~h 75 (89)
T 2rpp_A 26 GTCSRSDEECKFAHPPKSCQVE-----NGRVIACFDSLKGRCSRE-NCKYLHPPTH 75 (89)
T ss_dssp TCCCCCTTTSSSBCCCSSSCCB-----TTBEEBCHHHHHTCCCCT-TCCSBCCCHH
T ss_pred CCCCCCCCCCCCcCCCcccccc-----CCceeeehhhhhCcCCCC-CcceecCHHH
Confidence 3334443 79999986532111 123558999999999998 9999999643
No 136
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=62.97 E-value=1.5 Score=44.53 Aligned_cols=22 Identities=50% Similarity=0.905 Sum_probs=20.5
Q ss_pred CCCCccCCCCCCCCCcccCCCc
Q 005270 281 PCPEFRKGSCRQGDACEYAHGI 302 (705)
Q Consensus 281 ~Cp~f~kg~C~~Gd~C~~aHg~ 302 (705)
.|..|.+|.|.+|+.|.|.|..
T Consensus 72 ~C~ffakG~C~~G~~C~y~H~l 93 (240)
T 3u1l_A 72 FCLFFAKGMCCLGPKCEYLHHI 93 (240)
T ss_dssp BCHHHHTTCCSCGGGCSSBBSC
T ss_pred EcCccccCCCCCCCCCCccCCC
Confidence 8999999999999999999974
No 137
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=50.16 E-value=8.8 Score=38.38 Aligned_cols=43 Identities=30% Similarity=0.612 Sum_probs=34.6
Q ss_pred cccCCCCccCC-----CCCCCCCcccCCCccccccCCcccccccCCCC--CCCCCCccccCCCCCC
Q 005270 278 SCVPCPEFRKG-----SCRQGDACEYAHGIFECWLHPAQYRTRLCKDE--TNCNRRVCFFAHKPEE 336 (705)
Q Consensus 278 ~~~~Cp~f~kg-----~C~~Gd~C~~aHg~~E~~~hP~~ykT~~C~~~--~~C~~~~C~FaH~~~e 336 (705)
-++.|..| +| .|..++.|..-|- |++| |.|++..|.-.|+..+
T Consensus 150 LPeiC~~Y-kG~g~~g~C~~~~~C~kLHI---------------C~~Fl~G~C~f~~CkRsH~~~~ 199 (229)
T 3u9g_A 150 LPEICKSY-KGEGRKQTCGQPQPCERLHI---------------CEHFTRGNCSYLNCLRSHNLMD 199 (229)
T ss_dssp SCCBCTTC-CCSSSCCSCSSSSCCCSBCS---------------CHHHHTTCCCCSSCSSCCCTTS
T ss_pred CchHHHHh-CCCCCCCcCCCCCCCcceec---------------cchhhcCCcCCCCccCccCccC
Confidence 47889999 64 8888888887775 8888 8898877999998754
No 138
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=48.71 E-value=5.1 Score=30.58 Aligned_cols=26 Identities=31% Similarity=0.629 Sum_probs=22.5
Q ss_pred ccccCCCCcc-CCCCCCCCCcccCCCc
Q 005270 277 YSCVPCPEFR-KGSCRQGDACEYAHGI 302 (705)
Q Consensus 277 Y~~~~Cp~f~-kg~C~~Gd~C~~aHg~ 302 (705)
+.+.+|..|. -|-|++|..|.+.|.+
T Consensus 18 ~~~~iC~~FSayGwCp~G~~Cp~SHDi 44 (50)
T 2fc6_A 18 HPTSICDNFSAYGWCPLGPQCPQSHDI 44 (50)
T ss_dssp CCSCBCSHHHHTCCCTTGGGCSSBCCC
T ss_pred cccchhhhccccccCCCCCCCCccccC
Confidence 6677999994 4899999999999984
No 139
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=47.24 E-value=4.7 Score=40.37 Aligned_cols=22 Identities=41% Similarity=0.807 Sum_probs=0.0
Q ss_pred cccCCCCccCCCCCCCCCcccCCC
Q 005270 278 SCVPCPEFRKGSCRQGDACEYAHG 301 (705)
Q Consensus 278 ~~~~Cp~f~kg~C~~Gd~C~~aHg 301 (705)
+..+||+-+| |.||.+|.|-|.
T Consensus 191 ~~~~~~~~~~--~~~~~~~~~~~~ 212 (223)
T 3v33_A 191 RKQPCPYGRK--CTYGIKCRFFHP 212 (223)
T ss_dssp ------------------------
T ss_pred CCCCCCCCcc--cccCCcceecCC
Confidence 4557877776 888888888765
No 140
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=30.58 E-value=11 Score=37.82 Aligned_cols=23 Identities=26% Similarity=0.616 Sum_probs=0.0
Q ss_pred ccccCCCCCCCCCCc-cccCCCCC
Q 005270 313 RTRLCKDETNCNRRV-CFFAHKPE 335 (705)
Q Consensus 313 kT~~C~~~~~C~~~~-C~FaH~~~ 335 (705)
+-++|.++..|.|+. |.|.|-+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~ 214 (223)
T 3v33_A 191 RKQPCPYGRKCTYGIKCRFFHPER 214 (223)
T ss_dssp ------------------------
T ss_pred CCCCCCCCcccccCCcceecCCcc
Confidence 567899999999987 99999654
Done!