Query 005273
Match_columns 704
No_of_seqs 622 out of 5021
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 20:34:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005273.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005273hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nlc_A Uncharacterized protein 100.0 1.1E-75 3.9E-80 665.1 39.6 531 74-682 9-542 (549)
2 3v76_A Flavoprotein; structura 100.0 1.3E-29 4.5E-34 279.7 16.3 372 218-678 26-417 (417)
3 2gqf_A Hypothetical protein HI 99.9 2.1E-27 7.1E-32 261.1 20.1 370 219-680 4-400 (401)
4 2i0z_A NAD(FAD)-utilizing dehy 99.9 7.9E-26 2.7E-30 252.2 16.8 392 218-682 25-443 (447)
5 2zxi_A TRNA uridine 5-carboxym 99.9 8.9E-24 3E-28 240.5 24.5 104 583-696 332-440 (637)
6 3ces_A MNMG, tRNA uridine 5-ca 99.9 1.7E-23 5.9E-28 239.1 22.8 104 583-696 327-435 (651)
7 3cp8_A TRNA uridine 5-carboxym 99.9 2.3E-22 7.8E-27 229.7 23.7 104 583-696 321-429 (641)
8 1d4d_A Flavocytochrome C fumar 99.9 1.7E-20 5.7E-25 215.4 23.7 245 218-480 125-412 (572)
9 1y0p_A Fumarate reductase flav 99.9 1.9E-20 6.4E-25 215.1 22.0 250 218-481 125-413 (571)
10 2h88_A Succinate dehydrogenase 99.8 8.3E-21 2.9E-25 218.8 17.4 245 219-483 18-310 (621)
11 1chu_A Protein (L-aspartate ox 99.8 2.3E-20 7.8E-25 212.6 18.3 245 219-482 8-302 (540)
12 2bs2_A Quinol-fumarate reducta 99.8 1.2E-19 4.2E-24 210.5 24.1 243 219-482 5-313 (660)
13 1qo8_A Flavocytochrome C3 fuma 99.8 5.5E-20 1.9E-24 211.0 18.7 248 218-480 120-407 (566)
14 2wdq_A Succinate dehydrogenase 99.8 7E-20 2.4E-24 210.6 17.0 244 219-483 7-299 (588)
15 3k30_A Histamine dehydrogenase 99.8 1.7E-20 5.7E-25 220.2 10.1 184 39-256 228-428 (690)
16 1kf6_A Fumarate reductase flav 99.8 1.3E-18 4.4E-23 200.5 25.6 243 219-482 5-300 (602)
17 4at0_A 3-ketosteroid-delta4-5a 99.8 1.7E-18 5.9E-23 196.0 21.9 245 218-479 40-349 (510)
18 3gyx_A Adenylylsulfate reducta 99.8 1.5E-19 5.1E-24 209.7 12.0 250 219-492 22-353 (662)
19 1ps9_A 2,4-dienoyl-COA reducta 99.8 4.1E-19 1.4E-23 207.7 8.4 181 44-255 219-409 (671)
20 2e5v_A L-aspartate oxidase; ar 99.7 7.5E-18 2.5E-22 188.9 14.7 237 221-481 1-268 (472)
21 3g5s_A Methylenetetrahydrofola 99.7 1E-16 3.4E-21 171.0 17.7 102 583-695 270-377 (443)
22 1o94_A Tmadh, trimethylamine d 99.7 4.5E-18 1.5E-22 200.5 5.4 193 39-256 220-426 (729)
23 1jnr_A Adenylylsulfate reducta 99.7 1.4E-16 4.9E-21 185.0 10.6 173 219-398 22-219 (643)
24 2vdc_G Glutamate synthase [NAD 99.6 6.7E-16 2.3E-20 172.1 4.5 124 110-255 33-158 (456)
25 4dgk_A Phytoene dehydrogenase; 99.4 1E-12 3.6E-17 147.7 17.4 59 331-397 220-278 (501)
26 1gte_A Dihydropyrimidine dehyd 99.4 8E-14 2.7E-18 169.9 4.1 124 110-255 90-224 (1025)
27 3nyc_A D-arginine dehydrogenas 99.3 1.3E-11 4.6E-16 133.0 14.0 176 218-404 8-216 (381)
28 3dme_A Conserved exported prot 99.3 6.4E-12 2.2E-16 134.7 11.1 182 219-410 4-220 (369)
29 3jsk_A Cypbp37 protein; octame 99.2 6.9E-11 2.3E-15 125.6 15.6 146 219-398 79-252 (344)
30 1rp0_A ARA6, thiazole biosynth 99.2 7.6E-11 2.6E-15 122.9 15.6 146 219-398 39-192 (284)
31 1y56_B Sarcosine oxidase; dehy 99.2 7.4E-11 2.5E-15 127.7 14.9 174 219-402 5-210 (382)
32 2bry_A NEDD9 interacting prote 99.2 3.1E-12 1.1E-16 144.1 4.1 197 157-398 26-231 (497)
33 2gag_B Heterotetrameric sarcos 99.2 2E-10 6.9E-15 125.0 17.4 176 218-402 20-235 (405)
34 3dje_A Fructosyl amine: oxygen 99.2 1.6E-10 5.5E-15 127.6 16.0 62 331-400 160-224 (438)
35 2oln_A NIKD protein; flavoprot 99.2 1.6E-10 5.6E-15 125.8 15.7 167 219-400 4-211 (397)
36 3oz2_A Digeranylgeranylglycero 99.2 9.7E-11 3.3E-15 126.5 12.4 153 219-398 4-163 (397)
37 3ps9_A TRNA 5-methylaminomethy 99.2 3.1E-10 1.1E-14 132.7 17.6 170 217-399 270-475 (676)
38 2gjc_A Thiazole biosynthetic e 99.2 2.1E-10 7.1E-15 121.2 13.6 146 219-398 65-240 (326)
39 2uzz_A N-methyl-L-tryptophan o 99.1 1.7E-10 5.8E-15 124.2 12.6 168 219-399 2-206 (372)
40 3cgv_A Geranylgeranyl reductas 99.1 3.9E-10 1.3E-14 122.3 15.3 152 219-398 4-163 (397)
41 2qa1_A PGAE, polyketide oxygen 99.1 4.2E-10 1.4E-14 126.8 15.7 163 217-412 9-176 (500)
42 2gf3_A MSOX, monomeric sarcosi 99.1 4E-10 1.4E-14 122.0 14.5 169 219-399 3-207 (389)
43 2qa2_A CABE, polyketide oxygen 99.1 4.6E-10 1.6E-14 126.4 15.0 163 217-412 10-177 (499)
44 2cul_A Glucose-inhibited divis 99.1 3.8E-10 1.3E-14 113.9 12.6 123 219-398 3-126 (232)
45 3e1t_A Halogenase; flavoprotei 99.1 5.9E-10 2E-14 125.9 15.1 146 219-398 7-173 (512)
46 3pvc_A TRNA 5-methylaminomethy 99.1 6.5E-10 2.2E-14 130.2 15.8 62 330-399 410-471 (689)
47 2gmh_A Electron transfer flavo 99.1 1.7E-09 6E-14 124.0 18.9 177 219-411 35-231 (584)
48 3da1_A Glycerol-3-phosphate de 99.1 9.5E-10 3.2E-14 125.6 15.9 70 330-402 168-237 (561)
49 1ryi_A Glycine oxidase; flavop 99.0 1E-09 3.4E-14 118.6 13.1 61 330-400 162-222 (382)
50 1pj5_A N,N-dimethylglycine oxi 99.0 3E-09 1E-13 127.2 18.4 171 219-400 4-210 (830)
51 3axb_A Putative oxidoreductase 99.0 2.2E-10 7.4E-15 127.0 7.5 62 330-400 179-257 (448)
52 3ihg_A RDME; flavoenzyme, anth 99.0 2.1E-09 7.2E-14 122.1 15.6 171 219-413 5-195 (535)
53 4fk1_A Putative thioredoxin re 99.0 1.2E-09 4E-14 114.7 12.1 112 219-397 6-117 (304)
54 3alj_A 2-methyl-3-hydroxypyrid 99.0 9.7E-10 3.3E-14 119.1 11.3 136 219-398 11-161 (379)
55 3ka7_A Oxidoreductase; structu 99.0 2.7E-09 9.3E-14 117.0 14.8 58 331-397 195-252 (425)
56 4a9w_A Monooxygenase; baeyer-v 99.0 2E-09 6.9E-14 114.4 13.1 130 220-398 4-133 (357)
57 3nix_A Flavoprotein/dehydrogen 99.0 1.7E-09 5.8E-14 118.5 12.6 143 219-398 5-167 (421)
58 2rgh_A Alpha-glycerophosphate 99.0 2.5E-09 8.4E-14 122.4 13.5 68 331-401 187-254 (571)
59 3rp8_A Flavoprotein monooxygen 99.0 2.8E-09 9.7E-14 116.5 13.2 154 217-399 21-183 (407)
60 2x3n_A Probable FAD-dependent 99.0 1.2E-09 3.9E-14 119.2 9.8 148 219-398 6-167 (399)
61 3atr_A Conserved archaeal prot 99.0 2.9E-09 1E-13 118.3 13.3 150 219-398 6-163 (453)
62 3i3l_A Alkylhalidase CMLS; fla 98.9 1.3E-09 4.6E-14 124.9 10.3 158 219-398 23-189 (591)
63 3fmw_A Oxygenase; mithramycin, 98.9 2.7E-09 9.3E-14 122.0 12.8 164 219-413 49-219 (570)
64 2ywl_A Thioredoxin reductase r 98.9 5.4E-09 1.8E-13 100.7 12.7 110 220-398 2-111 (180)
65 1k0i_A P-hydroxybenzoate hydro 98.9 2.2E-09 7.5E-14 116.7 10.9 61 332-398 103-164 (394)
66 2qcu_A Aerobic glycerol-3-phos 98.9 4.7E-09 1.6E-13 118.3 13.1 68 331-402 148-215 (501)
67 2vou_A 2,6-dihydroxypyridine h 98.9 6.3E-09 2.2E-13 113.4 13.3 130 219-399 5-155 (397)
68 3lzw_A Ferredoxin--NADP reduct 98.9 4.5E-09 1.5E-13 110.7 11.7 116 219-396 7-122 (332)
69 3qj4_A Renalase; FAD/NAD(P)-bi 98.9 5.4E-09 1.9E-13 111.4 12.0 149 220-395 2-163 (342)
70 3nrn_A Uncharacterized protein 98.9 1.5E-08 5.3E-13 111.1 15.4 56 331-397 188-243 (421)
71 2zbw_A Thioredoxin reductase; 98.9 1.3E-08 4.6E-13 107.6 14.3 117 219-397 5-121 (335)
72 3ab1_A Ferredoxin--NADP reduct 98.9 9.3E-09 3.2E-13 110.3 13.1 118 219-397 14-131 (360)
73 1yvv_A Amine oxidase, flavin-c 98.9 7.1E-09 2.4E-13 109.7 11.7 38 220-257 3-40 (336)
74 3o0h_A Glutathione reductase; 98.9 3.5E-09 1.2E-13 118.7 9.3 87 303-399 204-290 (484)
75 3c4n_A Uncharacterized protein 98.9 3.5E-09 1.2E-13 115.9 8.7 62 331-402 171-241 (405)
76 3fbs_A Oxidoreductase; structu 98.8 1.7E-08 6E-13 104.4 13.1 109 220-397 3-112 (297)
77 3f8d_A Thioredoxin reductase ( 98.8 1.5E-08 5E-13 106.2 12.1 111 219-397 15-125 (323)
78 3c96_A Flavin-containing monoo 98.8 9.2E-09 3.2E-13 112.6 10.9 156 219-399 4-171 (410)
79 2q7v_A Thioredoxin reductase; 98.8 1.7E-08 5.9E-13 106.5 11.6 114 219-397 8-123 (325)
80 3itj_A Thioredoxin reductase 1 98.8 1.2E-08 3.9E-13 107.9 10.0 119 217-397 20-142 (338)
81 3d1c_A Flavin-containing putat 98.8 4.1E-08 1.4E-12 105.2 13.5 133 219-397 4-143 (369)
82 2q0l_A TRXR, thioredoxin reduc 98.8 3.8E-08 1.3E-12 102.9 12.5 112 220-397 2-114 (311)
83 4a5l_A Thioredoxin reductase; 98.7 3.3E-08 1.1E-12 103.5 11.7 118 219-397 4-121 (314)
84 3lxd_A FAD-dependent pyridine 98.7 4.9E-08 1.7E-12 107.0 13.5 126 219-425 152-290 (415)
85 2dkh_A 3-hydroxybenzoate hydro 98.7 2E-08 7E-13 116.4 10.9 166 219-412 32-222 (639)
86 4hb9_A Similarities with proba 98.7 2.2E-08 7.5E-13 108.7 10.4 36 220-255 2-37 (412)
87 4gcm_A TRXR, thioredoxin reduc 98.7 4.3E-08 1.5E-12 102.8 11.7 111 219-397 6-116 (312)
88 3gwf_A Cyclohexanone monooxyge 98.7 6.4E-08 2.2E-12 109.9 13.5 134 219-397 8-147 (540)
89 3nks_A Protoporphyrinogen oxid 98.7 4.9E-08 1.7E-12 108.7 12.1 56 333-397 235-290 (477)
90 2xve_A Flavin-containing monoo 98.7 6.6E-08 2.3E-12 107.7 13.1 149 220-397 3-166 (464)
91 2r0c_A REBC; flavin adenine di 98.7 5.4E-08 1.9E-12 110.8 12.6 59 333-398 139-197 (549)
92 2gv8_A Monooxygenase; FMO, FAD 98.7 9.8E-08 3.4E-12 105.7 14.3 157 219-397 6-177 (447)
93 2xdo_A TETX2 protein; tetracyc 98.7 3E-08 1E-12 108.0 10.0 38 218-255 25-62 (398)
94 2weu_A Tryptophan 5-halogenase 98.7 3.7E-08 1.2E-12 111.1 10.8 59 331-398 172-231 (511)
95 2aqj_A Tryptophan halogenase, 98.7 6.8E-08 2.3E-12 109.7 12.8 59 331-398 164-223 (538)
96 3cty_A Thioredoxin reductase; 98.7 8.1E-08 2.8E-12 101.0 12.3 111 219-397 16-126 (319)
97 2bcg_G Secretory pathway GDP d 98.7 1.3E-07 4.4E-12 105.1 13.7 58 332-398 242-301 (453)
98 2e4g_A Tryptophan halogenase; 98.7 7.8E-08 2.7E-12 109.5 12.1 59 331-398 193-253 (550)
99 4ap3_A Steroid monooxygenase; 98.7 7.1E-08 2.4E-12 109.8 11.6 135 219-397 21-159 (549)
100 2pyx_A Tryptophan halogenase; 98.7 1.4E-07 4.7E-12 106.9 13.9 58 332-398 175-234 (526)
101 3fg2_P Putative rubredoxin red 98.6 1.7E-07 5.7E-12 102.4 14.0 112 219-411 142-253 (404)
102 3s5w_A L-ornithine 5-monooxyge 98.6 4.1E-08 1.4E-12 109.1 9.2 153 219-397 30-192 (463)
103 1vdc_A NTR, NADPH dependent th 98.6 5.9E-08 2E-12 102.5 9.7 113 219-397 8-124 (333)
104 1fl2_A Alkyl hydroperoxide red 98.6 8.5E-08 2.9E-12 100.2 10.6 112 220-397 2-115 (310)
105 1w4x_A Phenylacetone monooxyge 98.6 1.9E-07 6.5E-12 106.1 14.0 136 219-397 16-154 (542)
106 3uox_A Otemo; baeyer-villiger 98.6 2E-07 6.8E-12 106.0 13.8 136 219-397 9-147 (545)
107 3r9u_A Thioredoxin reductase; 98.6 1E-07 3.6E-12 99.4 10.7 113 218-397 3-118 (315)
108 3ef6_A Toluene 1,2-dioxygenase 98.6 5.2E-08 1.8E-12 106.7 8.1 126 218-425 142-280 (410)
109 2eq6_A Pyruvate dehydrogenase 98.6 5.4E-08 1.8E-12 108.5 8.3 104 219-399 169-273 (464)
110 3p1w_A Rabgdi protein; GDI RAB 98.6 2.8E-07 9.6E-12 102.4 13.9 57 332-396 256-313 (475)
111 1ges_A Glutathione reductase; 98.6 3.4E-08 1.2E-12 109.6 6.5 101 219-399 167-267 (450)
112 2a87_A TRXR, TR, thioredoxin r 98.6 1.1E-07 3.8E-12 100.8 9.9 113 218-397 13-126 (335)
113 1trb_A Thioredoxin reductase; 98.6 1.5E-07 5.1E-12 98.7 10.7 112 219-397 5-116 (320)
114 2ivd_A PPO, PPOX, protoporphyr 98.6 1.3E-07 4.4E-12 105.4 10.7 45 215-259 12-56 (478)
115 4b1b_A TRXR, thioredoxin reduc 98.6 1.1E-07 3.7E-12 107.8 9.8 100 218-399 222-321 (542)
116 1hyu_A AHPF, alkyl hydroperoxi 98.6 1.4E-07 4.9E-12 106.6 10.9 115 217-397 210-326 (521)
117 2v3a_A Rubredoxin reductase; a 98.6 5E-07 1.7E-11 97.9 14.4 111 219-411 145-255 (384)
118 1pn0_A Phenol 2-monooxygenase; 98.6 2.2E-07 7.6E-12 108.1 12.3 36 219-254 8-48 (665)
119 1mo9_A ORF3; nucleotide bindin 98.6 1.3E-07 4.3E-12 107.1 9.9 112 220-411 215-329 (523)
120 1q1r_A Putidaredoxin reductase 98.6 3.3E-07 1.1E-11 101.1 13.1 111 219-410 149-261 (431)
121 3qvp_A Glucose oxidase; oxidor 98.6 9.9E-08 3.4E-12 108.9 9.0 109 301-413 185-318 (583)
122 1v59_A Dihydrolipoamide dehydr 98.5 5.5E-08 1.9E-12 108.7 6.7 106 219-399 183-289 (478)
123 1dxl_A Dihydrolipoamide dehydr 98.5 1.9E-07 6.5E-12 104.0 10.9 40 218-257 5-44 (470)
124 2r9z_A Glutathione amide reduc 98.5 8.5E-08 2.9E-12 106.8 7.8 100 219-399 166-266 (463)
125 1v59_A Dihydrolipoamide dehydr 98.5 5.5E-08 1.9E-12 108.7 6.2 38 219-256 5-42 (478)
126 3klj_A NAD(FAD)-dependent dehy 98.5 9.4E-08 3.2E-12 103.9 7.8 109 218-397 8-116 (385)
127 2gqw_A Ferredoxin reductase; f 98.5 3E-07 1E-11 100.7 11.9 96 219-398 145-240 (408)
128 2wpf_A Trypanothione reductase 98.5 8.9E-08 3.1E-12 107.6 7.8 101 219-399 191-294 (495)
129 3k7m_X 6-hydroxy-L-nicotine ox 98.5 2.4E-07 8.2E-12 101.7 10.6 40 220-259 2-41 (431)
130 2qae_A Lipoamide, dihydrolipoy 98.5 1.6E-07 5.6E-12 104.6 9.3 38 219-256 2-39 (468)
131 4gde_A UDP-galactopyranose mut 98.5 1E-07 3.5E-12 107.0 7.6 40 219-258 10-50 (513)
132 3ics_A Coenzyme A-disulfide re 98.5 1.7E-07 5.9E-12 107.5 9.5 118 215-397 32-152 (588)
133 1ojt_A Surface protein; redox- 98.5 2.4E-07 8.3E-12 103.6 10.4 38 219-256 6-43 (482)
134 3g3e_A D-amino-acid oxidase; F 98.5 6.3E-08 2.1E-12 103.4 5.1 36 220-255 1-42 (351)
135 2vvm_A Monoamine oxidase N; FA 98.5 5.5E-07 1.9E-11 100.8 13.0 58 331-397 254-312 (495)
136 1ojt_A Surface protein; redox- 98.5 9.2E-08 3.1E-12 107.1 6.4 103 219-399 185-288 (482)
137 2hqm_A GR, grase, glutathione 98.5 8.6E-08 2.9E-12 107.2 6.2 103 218-399 184-287 (479)
138 3i6d_A Protoporphyrinogen oxid 98.5 2.3E-07 7.9E-12 102.7 9.6 40 219-258 5-50 (470)
139 1zmd_A Dihydrolipoyl dehydroge 98.5 1.4E-07 4.6E-12 105.4 7.6 104 219-399 178-284 (474)
140 3oc4_A Oxidoreductase, pyridin 98.5 1.5E-07 5E-12 104.5 7.6 111 220-397 3-115 (452)
141 3lad_A Dihydrolipoamide dehydr 98.5 1.3E-07 4.5E-12 105.6 6.7 38 219-256 3-40 (476)
142 2yqu_A 2-oxoglutarate dehydrog 98.5 6.7E-07 2.3E-11 99.2 12.3 99 219-398 167-265 (455)
143 3h8l_A NADH oxidase; membrane 98.4 2.1E-07 7.2E-12 101.7 7.8 110 220-398 2-114 (409)
144 3qfa_A Thioredoxin reductase 1 98.4 3.6E-07 1.2E-11 103.2 9.8 36 217-252 30-65 (519)
145 4dna_A Probable glutathione re 98.4 1.4E-07 4.7E-12 105.1 6.2 101 218-399 169-270 (463)
146 1xdi_A RV3303C-LPDA; reductase 98.4 1.6E-07 5.5E-12 105.6 6.7 100 219-399 182-281 (499)
147 3urh_A Dihydrolipoyl dehydroge 98.4 4E-07 1.4E-11 102.1 9.9 106 218-399 197-302 (491)
148 1zk7_A HGII, reductase, mercur 98.4 2E-07 6.8E-12 103.8 7.3 97 219-398 176-272 (467)
149 3pl8_A Pyranose 2-oxidase; sub 98.4 1.5E-06 5E-11 100.4 14.7 51 346-399 274-326 (623)
150 1ebd_A E3BD, dihydrolipoamide 98.4 2.5E-07 8.7E-12 102.6 8.1 36 219-255 3-38 (455)
151 3lad_A Dihydrolipoamide dehydr 98.4 1.9E-07 6.6E-12 104.2 7.0 103 218-398 179-281 (476)
152 3q9t_A Choline dehydrogenase a 98.4 2.5E-08 8.6E-13 113.8 -0.2 66 344-413 218-295 (577)
153 1c0p_A D-amino acid oxidase; a 98.4 2.7E-07 9.2E-12 99.0 7.8 36 219-254 6-41 (363)
154 1nhp_A NADH peroxidase; oxidor 98.4 6.4E-07 2.2E-11 99.1 11.1 100 218-398 148-247 (447)
155 3dk9_A Grase, GR, glutathione 98.4 4E-07 1.4E-11 101.7 9.3 108 219-399 187-295 (478)
156 2a8x_A Dihydrolipoyl dehydroge 98.4 2.1E-07 7.2E-12 103.5 6.9 102 219-399 171-273 (464)
157 1zmd_A Dihydrolipoyl dehydroge 98.4 4.7E-07 1.6E-11 101.0 9.7 38 219-256 6-43 (474)
158 3dgz_A Thioredoxin reductase 2 98.4 1.2E-06 4E-11 98.2 12.9 34 218-251 5-38 (488)
159 4eqs_A Coenzyme A disulfide re 98.4 2.3E-07 7.8E-12 102.6 7.0 120 219-425 147-281 (437)
160 3iwa_A FAD-dependent pyridine 98.4 1.1E-06 3.8E-11 97.9 12.5 112 218-411 158-270 (472)
161 1lvl_A Dihydrolipoamide dehydr 98.4 1.4E-07 4.8E-12 104.9 5.1 101 218-399 170-270 (458)
162 1nhp_A NADH peroxidase; oxidor 98.4 3.1E-07 1.1E-11 101.7 7.9 36 220-255 1-38 (447)
163 3ef6_A Toluene 1,2-dioxygenase 98.4 3.7E-07 1.3E-11 99.9 8.4 107 220-397 3-111 (410)
164 2qae_A Lipoamide, dihydrolipoy 98.4 2.7E-07 9.2E-12 102.8 7.3 105 218-399 173-278 (468)
165 3cgb_A Pyridine nucleotide-dis 98.4 2.6E-07 8.9E-12 103.4 7.1 36 219-254 36-73 (480)
166 3ntd_A FAD-dependent pyridine 98.4 2.6E-07 8.9E-12 105.4 7.3 35 220-254 2-38 (565)
167 1s3e_A Amine oxidase [flavin-c 98.4 1.3E-06 4.4E-11 98.6 12.9 41 219-259 4-44 (520)
168 3lxd_A FAD-dependent pyridine 98.4 3.1E-07 1.1E-11 100.6 7.6 109 219-397 9-119 (415)
169 3urh_A Dihydrolipoyl dehydroge 98.4 1.1E-06 3.7E-11 98.6 11.8 39 219-257 25-63 (491)
170 2cdu_A NADPH oxidase; flavoenz 98.4 3.3E-07 1.1E-11 101.7 7.5 35 220-254 1-37 (452)
171 3c4a_A Probable tryptophan hyd 98.4 1.8E-07 6.1E-12 101.3 5.2 35 220-254 1-37 (381)
172 1dxl_A Dihydrolipoamide dehydr 98.4 1.5E-07 5E-12 104.9 4.6 102 219-399 177-281 (470)
173 1fec_A Trypanothione reductase 98.4 1.2E-06 4.1E-11 98.3 11.9 100 219-398 187-289 (490)
174 1q1r_A Putidaredoxin reductase 98.4 4E-07 1.4E-11 100.4 7.8 35 219-253 4-40 (431)
175 3kd9_A Coenzyme A disulfide re 98.4 3.8E-07 1.3E-11 101.0 7.6 36 219-254 3-40 (449)
176 1ebd_A E3BD, dihydrolipoamide 98.4 2E-06 6.9E-11 95.3 13.5 102 219-398 170-271 (455)
177 3dgz_A Thioredoxin reductase 2 98.4 6.2E-07 2.1E-11 100.5 9.5 105 219-399 185-289 (488)
178 3sx6_A Sulfide-quinone reducta 98.4 4.7E-07 1.6E-11 100.0 8.2 107 219-398 4-113 (437)
179 3iwa_A FAD-dependent pyridine 98.4 4.7E-07 1.6E-11 100.9 8.3 36 219-254 3-40 (472)
180 3oc4_A Oxidoreductase, pyridin 98.4 2E-06 6.9E-11 95.3 13.3 99 219-398 147-245 (452)
181 1trb_A Thioredoxin reductase; 98.4 1.8E-06 6.2E-11 90.4 12.3 103 219-397 145-247 (320)
182 2cdu_A NADPH oxidase; flavoenz 98.4 2E-06 6.9E-11 95.2 13.3 100 219-398 149-248 (452)
183 3dgh_A TRXR-1, thioredoxin red 98.4 9.9E-07 3.4E-11 98.7 10.8 34 218-251 8-41 (483)
184 1d5t_A Guanine nucleotide diss 98.4 7.7E-07 2.6E-11 98.2 9.8 58 332-398 234-291 (433)
185 2a8x_A Dihydrolipoyl dehydroge 98.4 3.5E-07 1.2E-11 101.8 7.1 35 220-255 4-38 (464)
186 3kkj_A Amine oxidase, flavin-c 98.4 2.4E-07 8.2E-12 92.6 5.2 39 220-258 3-41 (336)
187 2eq6_A Pyruvate dehydrogenase 98.4 6.7E-07 2.3E-11 99.5 9.3 34 219-252 6-39 (464)
188 1lvl_A Dihydrolipoamide dehydr 98.4 1.6E-06 5.6E-11 96.2 12.4 37 219-256 5-41 (458)
189 2jae_A L-amino acid oxidase; o 98.4 2.2E-06 7.4E-11 95.8 13.4 41 218-258 10-50 (489)
190 1onf_A GR, grase, glutathione 98.4 1.5E-06 5E-11 97.8 12.0 100 219-398 176-276 (500)
191 3l8k_A Dihydrolipoyl dehydroge 98.4 3.6E-07 1.2E-11 101.8 6.8 38 219-256 4-41 (466)
192 1xhc_A NADH oxidase /nitrite r 98.3 3.5E-07 1.2E-11 98.6 6.5 35 219-254 8-42 (367)
193 1y56_A Hypothetical protein PH 98.3 3.5E-07 1.2E-11 102.7 6.5 112 219-397 108-219 (493)
194 4dna_A Probable glutathione re 98.3 3.2E-07 1.1E-11 102.0 5.8 37 219-256 5-41 (463)
195 3cgb_A Pyridine nucleotide-dis 98.3 1.7E-06 5.7E-11 96.8 11.7 99 218-398 185-283 (480)
196 3fg2_P Putative rubredoxin red 98.3 7.7E-07 2.6E-11 97.1 8.5 35 220-254 2-38 (404)
197 2bc0_A NADH oxidase; flavoprot 98.3 3.8E-07 1.3E-11 102.2 5.8 36 219-254 35-73 (490)
198 2yqu_A 2-oxoglutarate dehydrog 98.3 1.3E-06 4.3E-11 97.0 9.9 37 220-256 2-38 (455)
199 1mo9_A ORF3; nucleotide bindin 98.3 2.6E-06 8.8E-11 96.3 12.6 40 217-256 41-80 (523)
200 1kdg_A CDH, cellobiose dehydro 98.3 3.2E-06 1.1E-10 96.1 13.3 62 337-398 200-262 (546)
201 4eqs_A Coenzyme A disulfide re 98.3 5.4E-07 1.8E-11 99.6 6.7 34 221-254 2-37 (437)
202 3dk9_A Grase, GR, glutathione 98.3 8.3E-07 2.8E-11 99.1 8.2 36 219-255 20-55 (478)
203 3dgh_A TRXR-1, thioredoxin red 98.3 2.4E-06 8.2E-11 95.5 12.0 104 219-398 187-290 (483)
204 3fim_B ARYL-alcohol oxidase; A 98.3 4.4E-07 1.5E-11 103.3 6.0 74 336-412 212-300 (566)
205 2gag_A Heterotetrameric sarcos 98.3 2.4E-06 8.2E-11 103.5 12.7 118 219-397 128-253 (965)
206 2bc0_A NADH oxidase; flavoprot 98.3 2.9E-06 9.9E-11 95.1 12.5 100 218-398 193-292 (490)
207 3ntd_A FAD-dependent pyridine 98.3 4E-06 1.4E-10 95.5 13.7 100 219-399 151-269 (565)
208 2hqm_A GR, grase, glutathione 98.3 4.9E-07 1.7E-11 101.1 5.9 37 219-256 11-47 (479)
209 3lov_A Protoporphyrinogen oxid 98.3 3.3E-06 1.1E-10 93.9 12.6 39 219-257 4-44 (475)
210 2r9z_A Glutathione amide reduc 98.3 1.5E-06 5.1E-11 96.7 9.7 37 219-256 4-40 (463)
211 3h28_A Sulfide-quinone reducta 98.3 5.1E-07 1.7E-11 99.4 5.4 36 220-255 3-40 (430)
212 1xhc_A NADH oxidase /nitrite r 98.3 1.7E-06 6E-11 93.2 9.4 104 219-411 143-246 (367)
213 1fec_A Trypanothione reductase 98.3 9.6E-07 3.3E-11 99.0 7.4 31 219-249 3-34 (490)
214 1xdi_A RV3303C-LPDA; reductase 98.2 2E-06 6.8E-11 96.6 9.9 36 220-256 3-41 (499)
215 3ics_A Coenzyme A-disulfide re 98.2 3.6E-06 1.2E-10 96.4 12.2 109 218-411 186-294 (588)
216 3ic9_A Dihydrolipoamide dehydr 98.2 2.9E-06 9.8E-11 95.2 11.0 103 219-399 174-276 (492)
217 4gut_A Lysine-specific histone 98.2 6.5E-06 2.2E-10 97.0 14.5 40 218-257 335-374 (776)
218 1onf_A GR, grase, glutathione 98.2 2.1E-06 7.2E-11 96.5 9.7 34 219-252 2-35 (500)
219 2wpf_A Trypanothione reductase 98.2 1.3E-06 4.3E-11 98.2 7.9 31 219-249 7-38 (495)
220 1fl2_A Alkyl hydroperoxide red 98.2 3.7E-06 1.3E-10 87.6 11.0 98 219-397 144-242 (310)
221 4b63_A L-ornithine N5 monooxyg 98.2 2.3E-06 8E-11 96.1 10.1 62 333-397 146-214 (501)
222 2jbv_A Choline oxidase; alcoho 98.2 2.5E-06 8.6E-11 96.9 9.9 52 343-397 220-273 (546)
223 3hyw_A Sulfide-quinone reducta 98.2 7.6E-07 2.6E-11 98.1 5.1 34 220-253 3-38 (430)
224 2v3a_A Rubredoxin reductase; a 98.2 1.5E-06 5E-11 94.2 7.2 34 219-252 4-39 (384)
225 2gqw_A Ferredoxin reductase; f 98.2 2E-06 6.8E-11 94.1 8.2 36 219-254 7-44 (408)
226 1m6i_A Programmed cell death p 98.2 4.6E-06 1.6E-10 93.5 11.3 101 219-399 180-284 (493)
227 3itj_A Thioredoxin reductase 1 98.2 5.2E-06 1.8E-10 87.3 11.1 99 218-397 172-271 (338)
228 3cty_A Thioredoxin reductase; 98.2 4.4E-06 1.5E-10 87.6 10.2 98 219-397 155-252 (319)
229 4b1b_A TRXR, thioredoxin reduc 98.2 2.1E-06 7.1E-11 97.3 8.0 35 219-253 42-76 (542)
230 1ges_A Glutathione reductase; 98.1 2.3E-06 7.8E-11 94.8 7.5 36 219-255 4-39 (450)
231 1zk7_A HGII, reductase, mercur 98.1 5E-06 1.7E-10 92.5 10.2 37 219-256 4-40 (467)
232 3kd9_A Coenzyme A disulfide re 98.1 6.9E-06 2.4E-10 90.8 11.1 111 218-412 147-257 (449)
233 1gpe_A Protein (glucose oxidas 98.1 6.1E-06 2.1E-10 94.5 11.0 54 341-398 240-298 (587)
234 1ju2_A HydroxynitrIle lyase; f 98.1 4.1E-06 1.4E-10 95.0 9.4 55 339-397 201-261 (536)
235 3t37_A Probable dehydrogenase; 98.1 1E-05 3.6E-10 91.1 12.8 49 344-397 223-271 (526)
236 3l8k_A Dihydrolipoyl dehydroge 98.1 1.7E-06 5.8E-11 96.3 6.2 103 218-399 171-274 (466)
237 3ab1_A Ferredoxin--NADP reduct 98.1 7E-06 2.4E-10 87.6 10.6 102 219-398 163-264 (360)
238 2q0l_A TRXR, thioredoxin reduc 98.1 1.2E-05 4.2E-10 83.6 11.9 98 219-397 143-241 (311)
239 2zbw_A Thioredoxin reductase; 98.1 1.1E-05 3.8E-10 85.0 11.6 102 219-398 152-253 (335)
240 2x8g_A Thioredoxin glutathione 98.1 2.1E-05 7.1E-10 90.3 14.3 35 217-251 105-139 (598)
241 3r9u_A Thioredoxin reductase; 98.1 1.7E-05 5.7E-10 82.5 11.8 98 219-397 147-244 (315)
242 1b37_A Protein (polyamine oxid 98.0 1.6E-05 5.3E-10 88.5 11.6 40 219-258 4-44 (472)
243 1lqt_A FPRA; NADP+ derivative, 98.0 1.4E-06 4.7E-11 96.8 3.0 37 219-255 3-46 (456)
244 1cjc_A Protein (adrenodoxin re 98.0 9.1E-07 3.1E-11 98.4 1.5 37 219-255 6-44 (460)
245 3qfa_A Thioredoxin reductase 1 98.0 5E-05 1.7E-09 85.6 15.4 103 219-398 210-316 (519)
246 3vrd_B FCCB subunit, flavocyto 98.0 6.7E-06 2.3E-10 89.3 7.7 48 635-682 273-323 (401)
247 1vdc_A NTR, NADPH dependent th 98.0 1.5E-05 5.3E-10 83.8 10.1 99 218-397 158-259 (333)
248 3klj_A NAD(FAD)-dependent dehy 98.0 8.7E-07 3E-11 96.2 0.2 111 219-424 146-269 (385)
249 2q7v_A Thioredoxin reductase; 98.0 1.7E-05 5.9E-10 83.2 10.2 97 219-397 152-249 (325)
250 3f8d_A Thioredoxin reductase ( 98.0 3.3E-05 1.1E-09 80.4 12.1 109 219-411 154-263 (323)
251 3ic9_A Dihydrolipoamide dehydr 98.0 1.2E-06 4.3E-11 98.1 1.0 37 219-256 8-44 (492)
252 1m6i_A Programmed cell death p 98.0 3.8E-06 1.3E-10 94.2 4.6 37 218-254 10-48 (493)
253 1hyu_A AHPF, alkyl hydroperoxi 98.0 2E-05 6.9E-10 88.9 10.6 98 219-397 355-453 (521)
254 3l5a_A NADH/flavin oxidoreduct 97.9 6.2E-07 2.1E-11 98.0 -2.4 115 39-166 246-375 (419)
255 4g6h_A Rotenone-insensitive NA 97.9 3.1E-05 1.1E-09 86.9 11.1 102 220-399 218-334 (502)
256 3fpz_A Thiazole biosynthetic e 97.9 5.3E-06 1.8E-10 87.6 3.9 41 217-257 63-105 (326)
257 3lzw_A Ferredoxin--NADP reduct 97.9 3.6E-05 1.2E-09 80.5 9.6 97 219-397 154-250 (332)
258 3d1c_A Flavin-containing putat 97.8 6E-05 2.1E-09 80.3 11.1 108 219-399 166-274 (369)
259 1gte_A Dihydropyrimidine dehyd 97.8 3.5E-05 1.2E-09 93.9 10.2 103 219-397 332-442 (1025)
260 1n4w_A CHOD, cholesterol oxida 97.8 4.6E-05 1.6E-09 85.6 10.4 62 337-399 226-290 (504)
261 2x8g_A Thioredoxin glutathione 97.8 0.00019 6.5E-09 82.3 15.3 100 219-398 286-396 (598)
262 2vdc_G Glutamate synthase [NAD 97.8 2.7E-05 9.1E-10 86.4 7.6 118 217-411 262-392 (456)
263 1coy_A Cholesterol oxidase; ox 97.8 6.1E-05 2.1E-09 84.7 10.3 61 337-398 231-294 (507)
264 2a87_A TRXR, TR, thioredoxin r 97.8 2.8E-05 9.6E-10 82.1 6.9 98 219-397 155-252 (335)
265 4a5l_A Thioredoxin reductase; 97.8 8.2E-05 2.8E-09 77.4 10.3 100 218-397 151-250 (314)
266 3s5w_A L-ornithine 5-monooxyge 97.7 0.00025 8.5E-09 78.4 14.6 37 218-254 226-264 (463)
267 4g6h_A Rotenone-insensitive NA 97.6 5.1E-05 1.7E-09 85.2 7.1 36 218-253 41-76 (502)
268 2b9w_A Putative aminooxidase; 97.6 3.9E-05 1.3E-09 83.7 5.9 41 218-258 5-46 (424)
269 3fbs_A Oxidoreductase; structu 97.6 5.9E-05 2E-09 77.6 6.9 86 219-397 141-226 (297)
270 2e1m_A L-glutamate oxidase; L- 97.6 4.2E-05 1.4E-09 82.4 5.4 42 217-258 42-84 (376)
271 2gag_A Heterotetrameric sarcos 97.6 0.00013 4.6E-09 88.2 9.8 99 219-399 284-385 (965)
272 2iid_A L-amino-acid oxidase; f 97.5 7.1E-05 2.4E-09 83.6 6.0 41 218-258 32-72 (498)
273 1rsg_A FMS1 protein; FAD bindi 97.5 4.4E-05 1.5E-09 85.9 4.2 40 219-258 8-48 (516)
274 1v0j_A UDP-galactopyranose mut 97.5 6.5E-05 2.2E-09 81.7 5.3 41 219-259 7-48 (399)
275 2xag_A Lysine-specific histone 97.4 6.1E-05 2.1E-09 89.4 4.5 42 216-257 275-316 (852)
276 4gcm_A TRXR, thioredoxin reduc 97.4 0.00068 2.3E-08 70.5 11.7 36 219-254 145-180 (312)
277 3hdq_A UDP-galactopyranose mut 97.4 0.0001 3.5E-09 80.0 5.3 41 218-258 28-68 (397)
278 2yg5_A Putrescine oxidase; oxi 97.4 7.9E-05 2.7E-09 82.0 4.5 40 219-258 5-44 (453)
279 3gr7_A NADPH dehydrogenase; fl 97.4 5.3E-05 1.8E-09 80.5 2.8 101 39-148 213-324 (340)
280 3ihm_A Styrene monooxygenase A 97.4 8.8E-05 3E-09 81.5 4.5 35 219-253 22-56 (430)
281 1sez_A Protoporphyrinogen oxid 97.4 0.00011 3.6E-09 82.3 4.8 40 219-258 13-52 (504)
282 1i8t_A UDP-galactopyranose mut 97.3 9.3E-05 3.2E-09 79.6 4.0 39 220-258 2-40 (367)
283 1cjc_A Protein (adrenodoxin re 97.3 0.00064 2.2E-08 75.3 10.8 55 345-399 270-335 (460)
284 4fk1_A Putative thioredoxin re 97.3 0.00023 8E-09 73.9 6.1 103 219-412 146-249 (304)
285 2bi7_A UDP-galactopyranose mut 97.3 0.0002 6.7E-09 77.5 5.5 39 220-258 4-42 (384)
286 1o94_A Tmadh, trimethylamine d 97.2 0.00064 2.2E-08 79.8 9.6 35 218-252 527-563 (729)
287 2z3y_A Lysine-specific histone 97.2 0.00024 8.1E-09 82.5 5.6 42 216-257 104-145 (662)
288 3kru_A NADH:flavin oxidoreduct 97.2 7.6E-05 2.6E-09 79.3 1.2 97 39-145 214-321 (343)
289 4dsg_A UDP-galactopyranose mut 97.2 0.0003 1E-08 78.6 6.0 41 218-258 8-49 (484)
290 3hgj_A Chromate reductase; TIM 97.2 9.3E-05 3.2E-09 79.0 1.8 102 39-148 223-335 (349)
291 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00017 5.8E-09 83.6 3.5 36 219-254 56-100 (721)
292 3gwf_A Cyclohexanone monooxyge 97.1 0.0017 5.7E-08 73.5 10.5 36 218-253 177-212 (540)
293 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.0016 5.5E-08 75.6 10.4 52 336-398 577-629 (671)
294 1z41_A YQJM, probable NADH-dep 97.0 8.1E-05 2.8E-09 79.1 -0.7 99 44-151 220-327 (338)
295 1lqt_A FPRA; NADP+ derivative, 97.0 0.0016 5.6E-08 71.9 9.5 63 335-398 249-327 (456)
296 3uox_A Otemo; baeyer-villiger 97.0 0.0029 1E-07 71.5 11.4 36 218-253 184-219 (545)
297 3l5l_A Xenobiotic reductase A; 96.9 0.00014 4.8E-09 78.0 -0.1 102 39-148 229-342 (363)
298 4ap3_A Steroid monooxygenase; 96.7 0.0095 3.3E-07 67.4 12.9 36 218-253 190-225 (549)
299 4a3u_A NCR, NADH\:flavin oxido 96.6 0.00018 6E-09 77.1 -2.0 100 38-149 221-333 (358)
300 3h28_A Sulfide-quinone reducta 96.5 0.0034 1.2E-07 68.7 7.6 57 334-399 202-258 (430)
301 3h8l_A NADH oxidase; membrane 96.5 0.005 1.7E-07 66.7 8.8 54 333-399 219-272 (409)
302 2xve_A Flavin-containing monoo 96.5 0.005 1.7E-07 68.2 8.7 36 218-253 196-231 (464)
303 2gv8_A Monooxygenase; FMO, FAD 96.4 0.0021 7.2E-08 70.7 5.2 35 218-252 211-246 (447)
304 3sx6_A Sulfide-quinone reducta 96.4 0.0069 2.4E-07 66.3 9.2 61 334-398 210-270 (437)
305 3gka_A N-ethylmaleimide reduct 96.4 0.00029 9.8E-09 75.3 -2.1 77 53-149 250-334 (361)
306 4ab4_A Xenobiotic reductase B; 96.4 0.00029 1E-08 75.3 -2.1 76 54-149 243-326 (362)
307 2hsa_B 12-oxophytodienoate red 96.2 0.00054 1.9E-08 74.3 -1.5 91 52-148 259-365 (402)
308 4a9w_A Monooxygenase; baeyer-v 96.1 0.0044 1.5E-07 64.9 5.5 33 219-252 163-195 (357)
309 2r14_A Morphinone reductase; H 96.1 0.00093 3.2E-08 71.9 0.0 86 50-148 252-345 (377)
310 2gou_A Oxidoreductase, FMN-bin 95.8 0.0014 4.7E-08 70.3 -0.1 86 49-148 246-339 (365)
311 3aty_A Tcoye, prostaglandin F2 95.7 0.00071 2.4E-08 72.8 -3.2 85 48-148 261-353 (379)
312 1vyr_A Pentaerythritol tetrani 95.6 0.0017 5.9E-08 69.5 -0.4 83 51-147 249-339 (364)
313 1icp_A OPR1, 12-oxophytodienoa 95.4 0.0019 6.6E-08 69.4 -1.0 84 52-147 255-346 (376)
314 4b63_A L-ornithine N5 monooxyg 95.2 0.083 2.8E-06 58.9 11.5 36 218-253 245-282 (501)
315 1w4x_A Phenylacetone monooxyge 95.0 0.24 8.3E-06 55.6 14.6 37 218-254 185-221 (542)
316 1y56_A Hypothetical protein PH 94.6 0.048 1.7E-06 60.6 7.3 60 341-411 266-325 (493)
317 3fwz_A Inner membrane protein 94.5 0.048 1.7E-06 49.5 6.0 37 217-253 5-41 (140)
318 1f76_A Dihydroorotate dehydrog 94.5 0.0035 1.2E-07 66.3 -2.1 93 52-144 224-332 (336)
319 3hyw_A Sulfide-quinone reducta 94.3 0.12 4.2E-06 56.2 9.7 58 334-400 202-259 (430)
320 2g1u_A Hypothetical protein TM 94.0 0.06 2.1E-06 49.7 5.6 36 218-253 18-53 (155)
321 1lss_A TRK system potassium up 93.7 0.06 2E-06 48.1 4.8 35 219-253 4-38 (140)
322 3llv_A Exopolyphosphatase-rela 93.5 0.077 2.6E-06 47.9 5.2 35 219-253 6-40 (141)
323 4gbu_A NADPH dehydrogenase 1; 93.4 0.0036 1.2E-07 67.9 -4.7 53 97-149 305-366 (400)
324 1vg0_A RAB proteins geranylger 93.1 0.07 2.4E-06 61.1 5.2 57 332-396 378-436 (650)
325 3ic5_A Putative saccharopine d 92.9 0.087 3E-06 45.5 4.4 35 219-253 5-40 (118)
326 1id1_A Putative potassium chan 92.2 0.16 5.5E-06 46.6 5.5 34 219-252 3-36 (153)
327 2hmt_A YUAA protein; RCK, KTN, 92.2 0.12 4.2E-06 46.2 4.6 34 219-252 6-39 (144)
328 2x5o_A UDP-N-acetylmuramoylala 92.0 0.09 3.1E-06 57.6 4.1 35 219-253 5-39 (439)
329 3c85_A Putative glutathione-re 91.7 0.16 5.4E-06 48.1 5.0 35 219-253 39-74 (183)
330 3lk7_A UDP-N-acetylmuramoylala 91.5 0.14 4.7E-06 56.3 4.8 34 219-252 9-42 (451)
331 3kkj_A Amine oxidase, flavin-c 90.8 0.66 2.2E-05 44.9 8.6 42 641-684 288-329 (336)
332 2ywl_A Thioredoxin reductase r 90.0 0.22 7.6E-06 46.7 4.2 43 638-682 127-170 (180)
333 3vrd_B FCCB subunit, flavocyto 90.0 0.15 5.2E-06 54.6 3.3 35 219-253 2-38 (401)
334 1kyq_A Met8P, siroheme biosynt 89.9 0.23 7.7E-06 50.7 4.3 34 219-252 13-46 (274)
335 3l4b_C TRKA K+ channel protien 89.9 0.24 8.3E-06 48.3 4.4 34 220-253 1-34 (218)
336 3ado_A Lambda-crystallin; L-gu 89.8 0.22 7.7E-06 51.9 4.3 35 219-253 6-40 (319)
337 3dfz_A SIRC, precorrin-2 dehyd 89.6 0.26 8.8E-06 48.7 4.3 34 218-251 30-63 (223)
338 3eag_A UDP-N-acetylmuramate:L- 89.5 0.3 1E-05 51.1 5.0 35 219-253 4-39 (326)
339 4e12_A Diketoreductase; oxidor 89.2 0.27 9.2E-06 50.3 4.3 34 220-253 5-38 (283)
340 4dio_A NAD(P) transhydrogenase 88.8 0.34 1.1E-05 52.2 4.8 36 218-253 189-224 (405)
341 1vg0_A RAB proteins geranylger 88.7 0.81 2.8E-05 52.3 8.2 39 219-257 8-46 (650)
342 1f0y_A HCDH, L-3-hydroxyacyl-C 88.7 0.36 1.2E-05 49.8 4.9 35 219-253 15-49 (302)
343 3fpz_A Thiazole biosynthetic e 88.6 0.19 6.5E-06 52.3 2.8 40 643-683 279-325 (326)
344 3p2y_A Alanine dehydrogenase/p 88.4 0.34 1.2E-05 51.7 4.5 36 218-253 183-218 (381)
345 2cul_A Glucose-inhibited divis 88.3 0.24 8.4E-06 48.8 3.2 40 642-682 192-231 (232)
346 3b0p_A TRNA-dihydrouridine syn 88.1 0.26 9E-06 52.1 3.5 85 54-144 145-238 (350)
347 3i83_A 2-dehydropantoate 2-red 88.1 0.36 1.2E-05 50.2 4.5 33 220-252 3-35 (320)
348 1lld_A L-lactate dehydrogenase 87.8 0.38 1.3E-05 49.9 4.4 34 219-252 7-42 (319)
349 2dpo_A L-gulonate 3-dehydrogen 87.5 0.39 1.3E-05 50.1 4.3 35 219-253 6-40 (319)
350 3doj_A AT3G25530, dehydrogenas 87.4 0.52 1.8E-05 48.8 5.2 37 217-253 19-55 (310)
351 4ffl_A PYLC; amino acid, biosy 87.4 0.51 1.7E-05 49.8 5.2 35 219-253 1-35 (363)
352 3oj0_A Glutr, glutamyl-tRNA re 87.3 0.21 7.3E-06 45.3 1.9 35 219-253 21-55 (144)
353 3k6j_A Protein F01G10.3, confi 87.3 0.49 1.7E-05 51.9 5.0 37 217-253 52-88 (460)
354 1ks9_A KPA reductase;, 2-dehyd 87.2 0.45 1.6E-05 48.2 4.5 33 221-253 2-34 (291)
355 2y0c_A BCEC, UDP-glucose dehyd 87.2 0.41 1.4E-05 52.9 4.4 35 219-253 8-42 (478)
356 1pjc_A Protein (L-alanine dehy 87.1 0.53 1.8E-05 49.9 5.1 35 219-253 167-201 (361)
357 3o0h_A Glutathione reductase; 86.9 0.46 1.6E-05 52.4 4.7 37 218-254 190-226 (484)
358 3hn2_A 2-dehydropantoate 2-red 86.9 0.4 1.4E-05 49.7 4.0 33 220-252 3-35 (312)
359 1x13_A NAD(P) transhydrogenase 86.7 0.53 1.8E-05 50.7 4.9 35 219-253 172-206 (401)
360 2raf_A Putative dinucleotide-b 86.6 0.53 1.8E-05 45.7 4.4 35 219-253 19-53 (209)
361 3dtt_A NADP oxidoreductase; st 86.6 0.61 2.1E-05 46.4 5.0 36 218-253 18-53 (245)
362 1zej_A HBD-9, 3-hydroxyacyl-CO 86.6 0.47 1.6E-05 48.8 4.2 35 218-253 11-45 (293)
363 1pzg_A LDH, lactate dehydrogen 86.4 0.62 2.1E-05 48.8 5.2 35 219-253 9-44 (331)
364 1jw9_B Molybdopterin biosynthe 86.2 0.53 1.8E-05 47.2 4.3 35 219-253 31-66 (249)
365 2eez_A Alanine dehydrogenase; 86.1 0.64 2.2E-05 49.5 5.1 35 219-253 166-200 (369)
366 1l7d_A Nicotinamide nucleotide 86.1 0.58 2E-05 50.1 4.8 36 218-253 171-206 (384)
367 3ghy_A Ketopantoate reductase 86.1 0.6 2E-05 48.9 4.8 32 220-251 4-35 (335)
368 3g17_A Similar to 2-dehydropan 86.1 0.53 1.8E-05 48.3 4.3 33 220-252 3-35 (294)
369 2ew2_A 2-dehydropantoate 2-red 86.0 0.52 1.8E-05 48.3 4.3 34 220-253 4-37 (316)
370 3gg2_A Sugar dehydrogenase, UD 85.8 0.52 1.8E-05 51.7 4.3 34 220-253 3-36 (450)
371 3vtf_A UDP-glucose 6-dehydroge 85.8 0.62 2.1E-05 50.8 4.8 36 218-253 20-55 (444)
372 2vns_A Metalloreductase steap3 85.6 0.77 2.6E-05 44.7 5.1 35 219-253 28-62 (215)
373 1zcj_A Peroxisomal bifunctiona 85.6 0.6 2.1E-05 51.3 4.7 35 219-253 37-71 (463)
374 1nyt_A Shikimate 5-dehydrogena 85.2 0.7 2.4E-05 46.8 4.7 34 219-252 119-152 (271)
375 2ewd_A Lactate dehydrogenase,; 85.1 0.69 2.3E-05 48.1 4.7 35 219-253 4-39 (317)
376 2vhw_A Alanine dehydrogenase; 85.0 0.78 2.7E-05 48.9 5.1 36 218-253 167-202 (377)
377 4a7p_A UDP-glucose dehydrogena 84.8 0.64 2.2E-05 50.8 4.4 35 219-253 8-42 (446)
378 3pef_A 6-phosphogluconate dehy 84.6 0.78 2.7E-05 46.7 4.8 34 220-253 2-35 (287)
379 3hwr_A 2-dehydropantoate 2-red 84.5 0.75 2.6E-05 47.7 4.6 33 219-252 19-51 (318)
380 3g79_A NDP-N-acetyl-D-galactos 84.4 0.69 2.4E-05 51.0 4.5 35 219-253 18-54 (478)
381 3k96_A Glycerol-3-phosphate de 84.3 0.71 2.4E-05 48.9 4.4 35 219-253 29-63 (356)
382 2hjr_A Malate dehydrogenase; m 84.3 0.83 2.8E-05 47.8 4.9 34 220-253 15-49 (328)
383 2v6b_A L-LDH, L-lactate dehydr 84.3 0.71 2.4E-05 47.7 4.3 33 220-252 1-35 (304)
384 4g65_A TRK system potassium up 84.2 0.39 1.3E-05 52.8 2.4 35 219-253 3-37 (461)
385 3l9w_A Glutathione-regulated p 84.2 0.9 3.1E-05 49.1 5.3 35 219-253 4-38 (413)
386 1bg6_A N-(1-D-carboxylethyl)-L 84.1 0.73 2.5E-05 48.3 4.4 34 220-253 5-38 (359)
387 3phh_A Shikimate dehydrogenase 83.9 0.89 3.1E-05 46.1 4.7 35 219-253 118-152 (269)
388 3tdn_A FLR symmetric alpha-bet 83.8 0.52 1.8E-05 47.0 2.9 75 54-141 36-118 (247)
389 1mv8_A GMD, GDP-mannose 6-dehy 83.6 0.63 2.2E-05 50.7 3.7 33 221-253 2-34 (436)
390 1p77_A Shikimate 5-dehydrogena 83.6 0.8 2.7E-05 46.5 4.2 34 219-252 119-152 (272)
391 1z82_A Glycerol-3-phosphate de 83.3 0.84 2.9E-05 47.6 4.4 34 219-252 14-47 (335)
392 3g0o_A 3-hydroxyisobutyrate de 83.3 0.86 2.9E-05 46.9 4.4 35 219-253 7-41 (303)
393 3ego_A Probable 2-dehydropanto 83.0 0.83 2.9E-05 47.2 4.2 33 220-253 3-35 (307)
394 2a9f_A Putative malic enzyme ( 82.8 1 3.5E-05 48.0 4.8 35 219-253 188-223 (398)
395 3pdu_A 3-hydroxyisobutyrate de 82.7 0.86 2.9E-05 46.4 4.1 34 220-253 2-35 (287)
396 3e8x_A Putative NAD-dependent 82.6 1.3 4.5E-05 43.2 5.3 36 218-253 20-56 (236)
397 1t2d_A LDH-P, L-lactate dehydr 82.4 1.2 4E-05 46.5 5.0 35 219-253 4-39 (322)
398 1txg_A Glycerol-3-phosphate de 82.3 0.82 2.8E-05 47.4 3.9 30 221-250 2-31 (335)
399 3pid_A UDP-glucose 6-dehydroge 82.3 0.87 3E-05 49.5 4.1 34 219-253 36-69 (432)
400 3ond_A Adenosylhomocysteinase; 82.1 1 3.4E-05 49.6 4.5 36 218-253 264-299 (488)
401 4dll_A 2-hydroxy-3-oxopropiona 82.1 0.91 3.1E-05 47.1 4.1 35 219-253 31-65 (320)
402 1pjq_A CYSG, siroheme synthase 82.1 1.1 3.6E-05 49.2 4.8 33 219-251 12-44 (457)
403 2h78_A Hibadh, 3-hydroxyisobut 81.9 0.89 3E-05 46.6 3.9 35 219-253 3-37 (302)
404 3mog_A Probable 3-hydroxybutyr 81.8 1 3.4E-05 49.8 4.5 35 219-253 5-39 (483)
405 2egg_A AROE, shikimate 5-dehyd 81.7 1.1 3.7E-05 46.2 4.4 34 219-252 141-175 (297)
406 1jay_A Coenzyme F420H2:NADP+ o 81.6 1.2 4.1E-05 42.8 4.5 33 221-253 2-35 (212)
407 3tl2_A Malate dehydrogenase; c 81.6 1.2 4E-05 46.3 4.7 34 219-252 8-42 (315)
408 1vl6_A Malate oxidoreductase; 81.6 1.2 4.2E-05 47.3 4.8 35 218-252 191-226 (388)
409 3tnl_A Shikimate dehydrogenase 81.5 1.4 4.9E-05 45.7 5.3 35 218-252 153-188 (315)
410 1guz_A Malate dehydrogenase; o 81.3 1.2 4E-05 46.2 4.5 34 220-253 1-36 (310)
411 3d4o_A Dipicolinate synthase s 81.3 1.5 5.1E-05 44.9 5.3 35 218-252 154-188 (293)
412 2rir_A Dipicolinate synthase, 81.2 1.5 5E-05 45.1 5.2 35 218-252 156-190 (300)
413 3gpi_A NAD-dependent epimerase 81.2 1.7 5.8E-05 43.8 5.7 35 219-253 3-37 (286)
414 3qha_A Putative oxidoreductase 81.2 0.88 3E-05 46.7 3.5 35 219-253 15-49 (296)
415 2yg5_A Putrescine oxidase; oxi 81.1 0.94 3.2E-05 49.1 3.9 52 332-396 215-267 (453)
416 2wtb_A MFP2, fatty acid multif 81.0 1.2 4.1E-05 51.8 4.9 35 219-253 312-346 (725)
417 3l6d_A Putative oxidoreductase 80.9 1.5 5.1E-05 45.2 5.2 35 219-253 9-43 (306)
418 3uog_A Alcohol dehydrogenase; 80.6 5.9 0.0002 41.6 9.9 36 217-252 188-223 (363)
419 1tv5_A Dhodehase, dihydroorota 80.6 0.38 1.3E-05 52.4 0.5 90 53-147 311-419 (443)
420 1dlj_A UDP-glucose dehydrogena 80.2 0.89 3.1E-05 48.9 3.3 32 221-253 2-33 (402)
421 3ew7_A LMO0794 protein; Q8Y8U8 80.2 1.7 5.8E-05 41.6 5.1 34 220-253 1-35 (221)
422 1y6j_A L-lactate dehydrogenase 80.1 1.5 5E-05 45.7 4.8 34 219-252 7-42 (318)
423 3gvi_A Malate dehydrogenase; N 80.0 1.5 5.1E-05 45.7 4.8 35 219-253 7-42 (324)
424 3pqe_A L-LDH, L-lactate dehydr 79.9 1.4 4.7E-05 46.0 4.5 34 219-252 5-40 (326)
425 3jyo_A Quinate/shikimate dehyd 79.8 1.5 5.2E-05 44.8 4.7 35 218-252 126-161 (283)
426 3don_A Shikimate dehydrogenase 79.6 1.1 3.8E-05 45.6 3.6 35 219-253 117-152 (277)
427 1a5z_A L-lactate dehydrogenase 79.4 1.2 4.2E-05 46.2 4.0 34 220-253 1-36 (319)
428 4e21_A 6-phosphogluconate dehy 79.4 1.4 4.8E-05 46.7 4.4 35 219-253 22-56 (358)
429 3t4e_A Quinate/shikimate dehyd 79.3 1.9 6.5E-05 44.7 5.3 35 218-252 147-182 (312)
430 2i6t_A Ubiquitin-conjugating e 79.3 1.4 4.8E-05 45.5 4.3 35 219-253 14-50 (303)
431 3h2s_A Putative NADH-flavin re 79.2 1.8 6.1E-05 41.7 4.8 33 221-253 2-35 (224)
432 2qyt_A 2-dehydropantoate 2-red 79.1 1 3.6E-05 46.2 3.3 31 220-250 9-45 (317)
433 2uyy_A N-PAC protein; long-cha 79.1 1.7 6E-05 44.7 5.0 35 219-253 30-64 (316)
434 1lu9_A Methylene tetrahydromet 79.0 2 6.7E-05 43.8 5.3 34 219-252 119-153 (287)
435 1hdo_A Biliverdin IX beta redu 78.9 2.1 7.1E-05 40.4 5.2 34 220-253 4-38 (206)
436 3fbt_A Chorismate mutase and s 78.9 1.7 5.8E-05 44.4 4.7 35 218-252 121-156 (282)
437 3fpc_A NADP-dependent alcohol 78.9 5 0.00017 41.9 8.6 36 217-252 165-201 (352)
438 3k30_A Histamine dehydrogenase 78.8 1.7 5.8E-05 50.2 5.3 103 218-399 522-626 (690)
439 3o8q_A Shikimate 5-dehydrogena 78.7 1.9 6.4E-05 44.0 5.0 35 218-252 125-160 (281)
440 2f1k_A Prephenate dehydrogenas 78.7 1.5 5.1E-05 44.2 4.3 33 221-253 2-34 (279)
441 1ur5_A Malate dehydrogenase; o 78.5 1.6 5.6E-05 45.1 4.5 33 220-252 3-36 (309)
442 3ojo_A CAP5O; rossmann fold, c 78.5 1.2 4.2E-05 48.3 3.7 35 219-253 11-45 (431)
443 3ius_A Uncharacterized conserv 78.4 1.8 6E-05 43.5 4.7 35 219-253 5-39 (286)
444 1hyh_A L-hicdh, L-2-hydroxyiso 78.4 1.4 4.7E-05 45.5 3.9 33 220-252 2-36 (309)
445 1yqg_A Pyrroline-5-carboxylate 78.3 1.5 5E-05 43.8 4.0 33 221-253 2-35 (263)
446 3rui_A Ubiquitin-like modifier 78.2 1.8 6.1E-05 45.4 4.7 35 219-253 34-69 (340)
447 3pwz_A Shikimate dehydrogenase 78.2 1.8 6.2E-05 43.9 4.7 35 218-252 119-154 (272)
448 3gvp_A Adenosylhomocysteinase 78.1 1.7 5.7E-05 47.0 4.5 36 218-253 219-254 (435)
449 3h8v_A Ubiquitin-like modifier 78.0 1.4 4.8E-05 45.2 3.8 35 219-253 36-71 (292)
450 3ce6_A Adenosylhomocysteinase; 78.0 1.6 5.5E-05 48.2 4.5 36 218-253 273-308 (494)
451 1wdk_A Fatty oxidation complex 78.0 1.5 5.3E-05 50.8 4.6 36 218-253 313-348 (715)
452 3tjl_A NADPH dehydrogenase; OL 77.9 0.1 3.4E-06 56.3 -5.1 84 55-148 263-363 (407)
453 4huj_A Uncharacterized protein 77.9 1.1 3.9E-05 43.6 3.0 35 219-253 23-58 (220)
454 2pv7_A T-protein [includes: ch 77.9 2.2 7.7E-05 43.6 5.4 34 219-252 21-55 (298)
455 1oju_A MDH, malate dehydrogena 77.9 1.5 5.1E-05 45.1 3.9 34 220-253 1-36 (294)
456 3vku_A L-LDH, L-lactate dehydr 77.8 1.7 5.8E-05 45.3 4.4 35 218-252 8-44 (326)
457 4ezb_A Uncharacterized conserv 77.7 1.5 5.1E-05 45.5 4.0 34 219-252 24-58 (317)
458 3ldh_A Lactate dehydrogenase; 77.5 1.9 6.5E-05 45.0 4.7 35 219-253 21-57 (330)
459 3q2o_A Phosphoribosylaminoimid 77.4 2.2 7.5E-05 45.4 5.3 35 218-252 13-47 (389)
460 2g5c_A Prephenate dehydrogenas 77.2 1.8 6E-05 43.8 4.3 34 220-253 2-37 (281)
461 1leh_A Leucine dehydrogenase; 77.2 1.9 6.6E-05 45.6 4.7 34 218-251 172-205 (364)
462 1zud_1 Adenylyltransferase THI 77.2 1.7 5.8E-05 43.5 4.1 35 219-253 28-63 (251)
463 2hk9_A Shikimate dehydrogenase 77.0 1.5 5.2E-05 44.4 3.7 34 219-252 129-162 (275)
464 3u62_A Shikimate dehydrogenase 77.0 2.6 8.7E-05 42.3 5.3 33 221-253 110-143 (253)
465 3p7m_A Malate dehydrogenase; p 76.8 2.1 7.3E-05 44.5 4.8 35 219-253 5-40 (321)
466 1nvt_A Shikimate 5'-dehydrogen 76.8 1.5 5E-05 44.8 3.6 33 219-252 128-160 (287)
467 2o3j_A UDP-glucose 6-dehydroge 76.7 1.6 5.4E-05 48.2 4.0 35 219-253 9-45 (481)
468 3jv7_A ADH-A; dehydrogenase, n 76.7 8 0.00027 40.1 9.4 36 217-252 170-206 (345)
469 2gf2_A Hibadh, 3-hydroxyisobut 76.5 1.8 6.2E-05 44.0 4.2 33 221-253 2-34 (296)
470 1evy_A Glycerol-3-phosphate de 76.5 1 3.4E-05 47.6 2.3 32 221-252 17-48 (366)
471 2q3e_A UDP-glucose 6-dehydroge 76.3 1.6 5.3E-05 48.0 3.8 34 220-253 6-41 (467)
472 3orq_A N5-carboxyaminoimidazol 76.3 2.5 8.5E-05 44.9 5.3 35 219-253 12-46 (377)
473 3cky_A 2-hydroxymethyl glutara 76.2 1.7 5.8E-05 44.3 3.9 35 219-253 4-38 (301)
474 3h5n_A MCCB protein; ubiquitin 76.2 2.2 7.6E-05 45.0 4.9 35 219-253 118-153 (353)
475 3ggo_A Prephenate dehydrogenas 76.2 1.9 6.4E-05 44.7 4.2 35 219-253 33-69 (314)
476 1vpd_A Tartronate semialdehyde 76.2 1.6 5.6E-05 44.4 3.7 34 220-253 6-39 (299)
477 4b4o_A Epimerase family protei 76.0 2.5 8.5E-05 42.8 5.1 34 220-253 1-35 (298)
478 3ip1_A Alcohol dehydrogenase, 76.0 5 0.00017 42.9 7.7 36 217-252 212-248 (404)
479 4id9_A Short-chain dehydrogena 75.8 2.5 8.6E-05 43.7 5.1 37 217-253 17-54 (347)
480 3ktd_A Prephenate dehydrogenas 75.7 2.3 8E-05 44.6 4.8 35 219-253 8-42 (341)
481 2aef_A Calcium-gated potassium 75.6 0.96 3.3E-05 44.4 1.7 34 219-253 9-42 (234)
482 1gpj_A Glutamyl-tRNA reductase 75.6 1.9 6.5E-05 46.3 4.2 35 218-252 166-201 (404)
483 3zwc_A Peroxisomal bifunctiona 75.6 2.1 7.1E-05 49.8 4.7 38 217-254 314-351 (742)
484 4aj2_A L-lactate dehydrogenase 75.6 2.4 8.1E-05 44.3 4.8 35 218-252 18-54 (331)
485 3c24_A Putative oxidoreductase 75.4 2.1 7.1E-05 43.5 4.3 34 220-253 12-46 (286)
486 3qsg_A NAD-binding phosphogluc 75.3 1.9 6.5E-05 44.5 4.0 33 219-251 24-57 (312)
487 1yj8_A Glycerol-3-phosphate de 75.3 1.6 5.5E-05 46.3 3.5 35 219-253 21-62 (375)
488 2zyd_A 6-phosphogluconate dehy 75.3 1.8 6.3E-05 47.6 4.1 35 219-253 15-49 (480)
489 2cvz_A Dehydrogenase, 3-hydrox 75.2 1.8 6.2E-05 43.7 3.7 33 220-253 2-34 (289)
490 1b37_A Protein (polyamine oxid 75.2 1.7 5.7E-05 47.5 3.7 55 333-396 207-269 (472)
491 3gms_A Putative NADPH:quinone 74.9 6 0.0002 41.0 7.8 37 217-253 143-180 (340)
492 1x0v_A GPD-C, GPDH-C, glycerol 74.9 1.4 4.7E-05 46.2 2.8 34 220-253 9-49 (354)
493 4hv4_A UDP-N-acetylmuramate--L 74.8 1.6 5.5E-05 48.3 3.4 35 218-252 21-56 (494)
494 1s3e_A Amine oxidase [flavin-c 74.7 2.2 7.5E-05 47.2 4.6 54 332-397 215-268 (520)
495 3qwb_A Probable quinone oxidor 74.6 7.1 0.00024 40.3 8.3 36 217-252 147-183 (334)
496 3o38_A Short chain dehydrogena 74.5 2.2 7.5E-05 42.5 4.1 36 218-253 21-58 (266)
497 3nep_X Malate dehydrogenase; h 74.4 2.2 7.6E-05 44.2 4.2 34 220-253 1-36 (314)
498 2rcy_A Pyrroline carboxylate r 74.4 2.4 8.1E-05 42.2 4.3 34 220-253 5-42 (262)
499 3krt_A Crotonyl COA reductase; 74.3 6.7 0.00023 42.6 8.3 35 217-251 227-262 (456)
500 2p4q_A 6-phosphogluconate dehy 74.0 2.6 9E-05 46.6 4.9 35 219-253 10-44 (497)
No 1
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.1e-75 Score=665.11 Aligned_cols=531 Identities=39% Similarity=0.675 Sum_probs=452.4
Q ss_pred ccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCCCChhhHHHHHhcccccccccCCCeEEEEEEEeecc-cc
Q 005273 74 EGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVASMLPAEAFTVVRKSFDARKVLKEPKFVYTVDMDVSK-LL 152 (704)
Q Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~~~p~~a~~i~~~~~DaR~~ladp~~~~kv~~~~~~-~~ 152 (704)
.-|+|++|+++|+++++ ..|.+.|++.++|+...+. .++|+++|+|||++ .++.|+|+|++.+.+ +
T Consensus 9 ~~~~~~~~~~~~~~~~~--------~~l~~~~~~~l~~~~~~~~---~~~i~~~sidar~~-~~~~~~~~v~v~~~~~~- 75 (549)
T 3nlc_A 9 SHMIRINEIKLPLDHEE--------GALLDAITKKLGIPAEKVI---SFNVFRRGYDARKK-TNIHLIYTLDIIVEGDE- 75 (549)
T ss_dssp --CEEEEEEEEETTCCT--------THHHHHHHHHHCCCGGGEE---EEEEEEEEECCC-----CEEEEEEEEEESSCH-
T ss_pred cceeEEEeEEcCCCCCH--------HHHHHHHHHHhCCCHHHCC---eEEEEEeecccCCC-CCceEEEEEEEEEccch-
Confidence 45899999999999876 5799999999999987655 57889999999998 789999999999865 2
Q ss_pred ccCCchhhhhhccccccccccccccccccCCceeeecccccccchhhhhhhhccCCCCccCCCCCCCCcEEEEcCCHHHH
Q 005273 153 DLEPRTWDFISRLEAKVGSVEHMLDKRASGDLINIIHDCKKVSDDTLLRKEISSGSEGLYNYPRTRKPKVAVVGGGPSGL 232 (704)
Q Consensus 153 ~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~v~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~aGl 232 (704)
...+.++... . .+. ..+ .. .+..+...+....+||+|||||++|+
T Consensus 76 ------~~~l~r~~~~-~-------------~~~------~~~-------~~--~~~~~~~~~~~~~~DVVIVGgGpaGL 120 (549)
T 3nlc_A 76 ------TALLAKFAND-P-------------HVR------QTP-------DM--EYKFVAKAPENLTERPIVIGFGPCGL 120 (549)
T ss_dssp ------HHHHHTTTTC-T-------------TEE------ECC-------CC--CCCCCCCCCTTCCCCCEEECCSHHHH
T ss_pred ------hHHHHhhccC-c-------------ccc------ccc-------cc--CCCCcCcCccCCCCCEEEECcCHHHH
Confidence 1233332110 0 000 000 00 11111111233458999999999999
Q ss_pred HHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCchhHHHHHHHHHHc
Q 005273 233 FASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNSNSVLAVMNTLVHF 312 (704)
Q Consensus 233 ~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~~~~~~~l~~l~~~ 312 (704)
+||+.|++.|++|+|+|+++.++.+.......|....+++.+++.++++|++.|+++++...+.........+++++..+
T Consensus 121 ~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~~~~~~~v~~~~~~~ 200 (549)
T 3nlc_A 121 FAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPNFYGRKVITEFVEA 200 (549)
T ss_dssp HHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccccccHHHHHHHHHHc
Confidence 99999999999999999999988888778888888888889999999999999999998877665544557788899999
Q ss_pred CCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEc
Q 005273 313 GAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILA 392 (704)
Q Consensus 313 G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlA 392 (704)
|.+..+.....++.++.....+.+.|++.+++.|++|+++++|+++..+++++++|.+.++ .++.||.||+|
T Consensus 201 G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G--------~~i~Ad~VVlA 272 (549)
T 3nlc_A 201 GAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--------EEIKSRHVVLA 272 (549)
T ss_dssp TCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS--------CEEECSCEEEC
T ss_pred CCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC--------CEEECCEEEEC
Confidence 9999988888999998888889999999999999999999999999998888999998865 36999999999
Q ss_pred CCCChHHHHHHHHhCCCcccccceeeEEEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCCCCCCcccc
Q 005273 393 VGHSARDIYEMLVSHNINLVPKDFAVGLRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDGDALSGVVT 472 (704)
Q Consensus 393 tG~~s~~~~~~l~~~gi~l~~~~~avG~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~ 472 (704)
+|+++++++.++...|+.+.+.++.+|+++++|+..++..+|++.. ....+|..+|++++...
T Consensus 273 ~G~~s~~~~~~l~~~Gi~~~~~~~~vgVrve~p~~~i~~~~f~~~~-----~~~~Lp~~~~~lv~~~~------------ 335 (549)
T 3nlc_A 273 VGHSARDTFEMLHERGVYMEAKPFSVGFRIEHKQSMIDEARFGPNA-----GHPILGAADYKLVHHCK------------ 335 (549)
T ss_dssp CCTTCHHHHHHHHHTTCCCEECCEEEEEEEEEEHHHHHHHHTSTTT-----TCTTTCSCCCCCEEECT------------
T ss_pred CCCChhhHHHHHHHcCCCcccceEEEEEEecCCchhchhhhccCcC-----CcccCCCCccEEEEECC------------
Confidence 9999998888999999999899999999999999999998885432 23456678899988753
Q ss_pred chhhhhhhhccCCceEEEccCCCCcceecCcccccCCCccccceeEEeeecC-CcCcccCCCCchhhHHHHHHHHHHHHh
Q 005273 473 TNRSCYSFCMCPGGQIVLTSTNPLELCINGMSFSRRSSRWANAALVVTVSAK-DFDTLDLHGPLAGVKFQREFEQRAAIM 551 (704)
Q Consensus 473 ~~r~v~~fc~~~gG~vv~~~~~~~~~~vng~s~~~r~~~~~n~~~~~~v~~~-d~~p~~~~~~l~g~~~~~~~e~~a~~~ 551 (704)
..|.+|+|||||+|+|+..+++.+.+++||||++.|++.|+|+++++++++. ||. .+||+|++||+.||++++.+
T Consensus 336 ~~~~v~tFcm~pgG~vv~~~~~~~~~~~nG~s~~~r~~~~~n~a~~v~~~~~~~~~----~~pl~~~~~~~~~~~~a~~~ 411 (549)
T 3nlc_A 336 NGRTVYSFCMCPGGTVVAATSEEGRVVTNGMSQYSRAERNANSAIVVGISPEVDYP----GDPLAGIRFQRELESNAYKL 411 (549)
T ss_dssp TSCEEEEEEEEEEEEEEECCCSTTCCCEEEECCTTCCSSEEEEEEEEEECBTTTBC----CSTTHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeeCCCCcEEEEEecCCeeEECCCCcccCCCCCcceEEEEEeecCCCCC----CCCcHHHHHHHHHHHHHHHH
Confidence 3677999999999999999999999999999999999999999999998877 773 35899999999999999999
Q ss_pred CCCceeeccccHHhhhcCCCCCC-CCCCCcccCceeEccCCccChHHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEeee
Q 005273 552 GGGNFVVPAQKVTDFLENKLSAS-PLPPSSYRLGVKAASLHELFPTHLTDALKHSISMFDEELPGFISDTGLLHGVETRT 630 (704)
Q Consensus 552 gg~~~~~p~q~l~dfl~~~~~~~-~l~~~~~~~~~~~~~l~~~~p~~~~~~l~~~l~~~~~~~~G~~~~~a~~~Gve~~~ 630 (704)
||++|.+|+|+++||+.||.+.. ....++|.+++++++|+.+||+.+.+.|+++|..|++++|||.++++++||||+|+
T Consensus 412 gg~~~~~~~q~~~d~~~g~~s~~~~~~~pt~~~~~~~~~l~~~~p~~~~~~l~e~~~~~~~~~~g~~~~~~~l~g~e~~~ 491 (549)
T 3nlc_A 412 GGENYDAPAQKIGDFLKGRDPSQLGDVEPSFTPGIKLTDLSKALPPFAVEAIREAIPAFDRKIKGFASEDGLLTGVETRT 491 (549)
T ss_dssp TTSSSCEEEEEHHHHHHTCTTCCCCSSCCCCSSCEEECCGGGTSCHHHHHHHHHHHHHHHTTSTTTTCTTCEEEEEECCS
T ss_pred cCCCCcceEEeHHHHhCCCcCCCCCCcCCCCCCCcEEechhHhCcHHHHHHHHHHHHHhhccCcCCCCCCcEEEEEeecc
Confidence 99999999999999999998753 23556799999999999999999999999999999999999999999999999999
Q ss_pred cCceeccCCCCCccccCcCCeeEccccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005273 631 SCPLQIPRNNETCESTSLKGLYPVGEGAGYAGGIVSAAADGMYAGFAVAKDF 682 (704)
Q Consensus 631 ~~p~~i~~~~~tles~~i~GLy~~GE~aG~~GGi~sA~~~G~~Aa~~i~~~~ 682 (704)
|||+||.|| ++|||.+++|||+|||++||+|||+||+++|++||++|++.+
T Consensus 492 ssp~ri~~~-~~~~~~~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~ 542 (549)
T 3nlc_A 492 SSPVCIKRG-KDFQSVNLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDI 542 (549)
T ss_dssp SCSEECCCT-TTTSCTTCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEC-CCceECCcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 679988999999999999999999999999999999999875
No 2
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.96 E-value=1.3e-29 Score=279.72 Aligned_cols=372 Identities=18% Similarity=0.229 Sum_probs=229.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCc-ccc-cCcchhhhh
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGA-GTW-SDGKLVTRI 295 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~-~~~-sdg~l~~~~ 295 (704)
..+||+|||||++|++||+.|+++|++|+|+|+.+.++++....++ ..+|+....... ..+ .++.+....
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGg--------g~~n~t~~~~~~~~~~~~~~~~~~~~ 97 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGG--------GRCNFTNIHASPRNFLSGNPHFCKSA 97 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGG--------GTCEEEETTCSGGGEEESSTTTTHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCC--------CceeccCCCCCHHHHhhcCHHHHHHH
Confidence 3579999999999999999999999999999999887543211110 111211100000 001 112222111
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKD 375 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~ 375 (704)
... .......+++...|++......+..++ ......+.+.|.+.+++.|++++++++|+++..+++. +.|.+.++
T Consensus 98 l~~-~~~~~~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~-~~V~~~~g-- 172 (417)
T 3v76_A 98 LAR-YRPQDFVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG-FRVTTSAG-- 172 (417)
T ss_dssp HHH-SCHHHHHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-EEEEETTE--
T ss_pred HHh-cCHHHHHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-EEEEECCc--
Confidence 110 123456778889999887776666665 5566789999999999999999999999999888775 34555442
Q ss_pred CCCCceeEEecCeEEEcCCCCh-------HHHHHHHHhCCCccccc-ceeeEEEEec-chhhhcccccccchhhhcccCC
Q 005273 376 NSQSDIQKLGFDAVILAVGHSA-------RDIYEMLVSHNINLVPK-DFAVGLRMEH-PQELINSIQYSELATEVQKGRG 446 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s-------~~~~~~l~~~gi~l~~~-~~avG~~~~~-p~~~~~~~~~~~l~~e~~~g~g 446 (704)
.+.||.||+|+|+++ .+.+.+++..|+++.+. |..+++.+.. ....+..++ |.
T Consensus 173 -------~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l~----------G~- 234 (417)
T 3v76_A 173 -------TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALA----------GV- 234 (417)
T ss_dssp -------EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCEEEEEEESCCEECCHHHHHHTGGGT----------TC-
T ss_pred -------EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCEecccceeeeEEecCccccccccCC----------CC-
Confidence 689999999999987 25678899999987653 4445555431 001111111 11
Q ss_pred CCccccccceecccCCCCCCCCccccchhhhhhhhccCCceEEEccCCCCcceecCcccccCCCccccceeEEeeecCCc
Q 005273 447 KVPVADYKVAKYVSGEDGDALSGVVTTNRSCYSFCMCPGGQIVLTSTNPLELCINGMSFSRRSSRWANAALVVTVSAKDF 526 (704)
Q Consensus 447 ~~~~~d~~~~~~~~~~~~~e~a~Rd~~~r~v~~fc~~~gG~vv~~~~~~~~~~vng~s~~~r~~~~~n~~~~~~v~~~d~ 526 (704)
.+ +..+ ..+. . .-.|++++|+++.+++++..+|.+.+. ...+ ..|+
T Consensus 235 --~~-~~~~--~~~~----------------~----~~~~~~lft~~G~sGp~il~~S~~~~~----~~~~-----~id~ 280 (417)
T 3v76_A 235 --AA-DAEA--RFGK----------------A----AFREAVLITHRGLSGPAILQISSYWRE----GEEI-----VLRL 280 (417)
T ss_dssp --EE-EEEE--EETT----------------E----EEEEEEEECSSEEESHHHHHHTTTCCT----TCCE-----EEEE
T ss_pred --ce-eEEE--EECC----------------E----eeeeeeEEECCCcchHHHHHHHHHhhC----CCEE-----EEEC
Confidence 00 0010 0000 0 113689999999999998444433221 1111 2455
Q ss_pred CcccCCCCchhhHHHHHHHHHHHHhCCCceeeccccHHhhhcCCCCCCCCCCCccc-CceeEccCCccChHHHHHHHHHH
Q 005273 527 DTLDLHGPLAGVKFQREFEQRAAIMGGGNFVVPAQKVTDFLENKLSASPLPPSSYR-LGVKAASLHELFPTHLTDALKHS 605 (704)
Q Consensus 527 ~p~~~~~~l~g~~~~~~~e~~a~~~gg~~~~~p~q~l~dfl~~~~~~~~l~~~~~~-~~~~~~~l~~~~p~~~~~~l~~~ 605 (704)
.|. ....+.+.+.....+ .+.+..++.+.+... +.+.... .++ ...--..+++.....|.+.
T Consensus 281 ~p~--------~~~~~~~~~~~~~~~-------~~~~~~~l~~~lp~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 343 (417)
T 3v76_A 281 MPD--------IDIASILKGMRRANG-------RQAVQTALADILPRR-LAQFFADEAKL-TGRMLADLSDKTIDALASS 343 (417)
T ss_dssp STT--------SCHHHHHHHHHHHTC-------SSBHHHHHTTTSCHH-HHHHHHHHTTC-TTCBGGGCCHHHHHHHHHH
T ss_pred CCC--------CCHHHHHHHHHHhch-------hhhHHHHHHHHhhHH-HHHHHHHhcCC-CCCchhhCCHHHHHHHHHH
Confidence 552 111222333222222 344555555433210 0000000 011 0001123345667788889
Q ss_pred HHhhhhcC---CCCCCCCeEEEEEEeeecCceeccCCCCCccccCcCCeeEcccc---chhhHH--HHHHHHHHHHHHHH
Q 005273 606 ISMFDEEL---PGFISDTGLLHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEG---AGYAGG--IVSAAADGMYAGFA 677 (704)
Q Consensus 606 l~~~~~~~---~G~~~~~a~~~Gve~~~~~p~~i~~~~~tles~~i~GLy~~GE~---aG~~GG--i~sA~~~G~~Aa~~ 677 (704)
|+.|.-.+ .||..++++.|||++++ +|++|||||.+||||||||+ +|+||| +++||++|+.||+.
T Consensus 344 l~~~~~~~~g~~~~~~a~vt~GGV~~~e-------i~~~tmesk~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 344 IQVWAVKPAGSEGYRTAEVTLGGVDTRA-------LDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp HHSEEECCCEECCTTTCSEEEEEECGGG-------BCTTTCBBTTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEecccCCcceEEEeCCCCcccc-------CChhhccccCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 99988544 57888899999999999 77899999999999999999 899999 68999999999876
Q ss_pred H
Q 005273 678 V 678 (704)
Q Consensus 678 i 678 (704)
+
T Consensus 417 ~ 417 (417)
T 3v76_A 417 V 417 (417)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.95 E-value=2.1e-27 Score=261.08 Aligned_cols=370 Identities=17% Similarity=0.206 Sum_probs=221.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCC-cccc-cCcchhhhhc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGG-AGTW-SDGKLVTRIG 296 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG-~~~~-sdg~l~~~~~ 296 (704)
.+||+|||||++|++||+.|+++|.+|+|+|+++.+++.....++ ..||+...... ...+ .++++.....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sgg--------g~cn~~~~~~~~~~~~~~~~~~~~~~l 75 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGG--------GFCNFTNLEVTPAHYLSQNPHFVKSAL 75 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGG--------GTCCCEESSCCGGGEECSCTTSTHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCC--------CeEEccCCccCHHHhccCCHHHHHHHH
Confidence 379999999999999999999999999999999876532211110 11111110000 0001 1222221110
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe----CCEEEEEEEcC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE----NARIVGVKVSD 372 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~----~g~v~GV~~~~ 372 (704)
.. ......++++..+|++......++.++.. ....+++.|.+.+++.|++++++++|+++..+ ++. +.|.+.+
T Consensus 76 ~~-~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~ 152 (401)
T 2gqf_A 76 AR-YTNWDFISLVAEQGITYHEKELGQLFCDE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNS 152 (401)
T ss_dssp HH-SCHHHHHHHHHHTTCCEEECSTTEEEETT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETT
T ss_pred Hh-CCHHHHHHHHHhCCCceEECcCCEEccCC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECC
Confidence 00 01334667888899987665555544433 56678899999999999999999999999876 454 3455543
Q ss_pred CCCCCCCceeEEecCeEEEcCCCChH-------HHHHHHHhCCCccccc-ceeeEEEEecchhhh-cccccccchhhhcc
Q 005273 373 SKDNSQSDIQKLGFDAVILAVGHSAR-------DIYEMLVSHNINLVPK-DFAVGLRMEHPQELI-NSIQYSELATEVQK 443 (704)
Q Consensus 373 ~~~~~~~~~~~i~Ad~VVlAtG~~s~-------~~~~~l~~~gi~l~~~-~~avG~~~~~p~~~~-~~~~~~~l~~e~~~ 443 (704)
+ ++.||.||+|||+++. +.+.+++..|+++.+. |..+++.+. ....+ ... .
T Consensus 153 g---------~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~~~~-~~~~~~~~l----------~ 212 (401)
T 2gqf_A 153 T---------QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPFTYR-ETDKFLTAL----------S 212 (401)
T ss_dssp E---------EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCEECC-GGGGGGGGG----------T
T ss_pred C---------EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeeceecC-CchhhcccC----------C
Confidence 2 6899999999999872 5678899999987654 222333211 11000 111 1
Q ss_pred cCCCCccccccceecccCCCCCCCCccccchhhhhhhhccCCceEEEccCCCCcceecCcccccCCCccccceeEEeeec
Q 005273 444 GRGKVPVADYKVAKYVSGEDGDALSGVVTTNRSCYSFCMCPGGQIVLTSTNPLELCINGMSFSRRSSRWANAALVVTVSA 523 (704)
Q Consensus 444 g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~~~r~v~~fc~~~gG~vv~~~~~~~~~~vng~s~~~r~~~~~n~~~~~~v~~ 523 (704)
|. .+ +-++. ..+ ... + .|++++|+++.++..+.. +++.... ... +.
T Consensus 213 g~---~~-~~~~~-i~G--------------~~~--~----~g~~l~t~~g~sG~~~l~--~s~~~~~--~~~--~~--- 258 (401)
T 2gqf_A 213 GI---SL-PVTIT-ALC--------------GKS--F----YNQLLFTHRGISGPAVLQ--ISNYWQP--TES--VE--- 258 (401)
T ss_dssp TC---EE-EEEEE-ETT--------------SCE--E----EEEEEECSSEEESHHHHH--HTTTCCT--TCC--EE---
T ss_pred Ce---ee-eeEEE-EcC--------------Cce--E----EeCEEEECCCccHHHHHH--HHHHHhc--CCE--EE---
Confidence 11 00 00111 001 001 1 278999999999988743 3332211 112 22
Q ss_pred CCcCcccCCCCchhhHHHHHHHHHHHHhCCCceeeccccHHhhhcCCCCC----CCCCCCcccCceeEccCCccChHHHH
Q 005273 524 KDFDTLDLHGPLAGVKFQREFEQRAAIMGGGNFVVPAQKVTDFLENKLSA----SPLPPSSYRLGVKAASLHELFPTHLT 599 (704)
Q Consensus 524 ~d~~p~~~~~~l~g~~~~~~~e~~a~~~gg~~~~~p~q~l~dfl~~~~~~----~~l~~~~~~~~~~~~~l~~~~p~~~~ 599 (704)
.|+.|. ++..++.+.+.+ .. |.+.+..+|.+.+.. ..+... ++....+ ..+++...
T Consensus 259 i~~~p~-----~~~~~~~~~~~~---~~-------~~~~~~~~l~~~lp~~~~~~~~~~~----~~~~~~~-~~~~~~~~ 318 (401)
T 2gqf_A 259 IDLLPN-----HNVEEEINQAKQ---SS-------PKQMLKTILVRLLPKKLVELWIEQG----IVQDEVI-ANISKVRV 318 (401)
T ss_dssp EESCSS-----SCHHHHHHHHHH---HC-------TTSBHHHHHTTTSCHHHHHHHHHTT----SSCCCBG-GGCCHHHH
T ss_pred EECCCC-----CCHHHHHHHHhh---hc-------ccccHHHHhhhhcCHHHHHHHHHHc----CCCCCch-hhCCHHHH
Confidence 356552 111222112111 11 134455555433220 000000 0110011 22344556
Q ss_pred HHHHHHHHhhhhcCC---CCCCCCeEEEEEEeeecCceeccCCCCCccccCcCCeeEcccc---chhhHH--HHHHHHHH
Q 005273 600 DALKHSISMFDEELP---GFISDTGLLHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEG---AGYAGG--IVSAAADG 671 (704)
Q Consensus 600 ~~l~~~l~~~~~~~~---G~~~~~a~~~Gve~~~~~p~~i~~~~~tles~~i~GLy~~GE~---aG~~GG--i~sA~~~G 671 (704)
..|.+.|+.+.-.+. +|..++++.|||.+++ +|++||||+.+||||||||+ +|+||| +++||++|
T Consensus 319 ~~l~~~l~~~~~~~~g~~~~~~a~vt~GGv~~~~-------~~~~tmes~~~~gly~~GE~ldv~g~~GGynlq~a~~sg 391 (401)
T 2gqf_A 319 KNLVDFIHHWEFTPNGTEGYRTAEVTMGGVDTKV-------ISSKTMESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSA 391 (401)
T ss_dssp HHHHHHHHCEEECCSEECCTTTCSEEEEEECGGG-------BCTTTCBBSSSTTEEECGGGBSCEECTTTHHHHHHHHHH
T ss_pred HHHHHHHhcCEEEecccCCcceeEEeCCcccccc-------CChhhccccCCCCEEEEEEeEEeccCCCCHHHHHHHHHH
Confidence 788888888886554 6777888999999999 78799999999999999999 899999 67999999
Q ss_pred HHHHHHHHh
Q 005273 672 MYAGFAVAK 680 (704)
Q Consensus 672 ~~Aa~~i~~ 680 (704)
+.||+++.+
T Consensus 392 ~~ag~~~~~ 400 (401)
T 2gqf_A 392 YACALSISR 400 (401)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998854
No 4
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.93 E-value=7.9e-26 Score=252.19 Aligned_cols=392 Identities=18% Similarity=0.206 Sum_probs=226.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccC--C-cccc-cCcchhh
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEG--G-AGTW-SDGKLVT 293 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~g--G-~~~~-sdg~l~~ 293 (704)
..+||+|||||++|++||+.|+++|.+|+|+|+.+.+++.....+. ..+++..... . ...+ .++.+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~--------g~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGG--------GRCNVTNRLPLDEIVKHIPGNGRFLY 96 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGG--------GTCCCEECSCHHHHHHTCTBTGGGGH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCC--------CceeccCcccHHHHHHHhccChHHHH
Confidence 3579999999999999999999999999999999876532111110 0011100000 0 0000 1111111
Q ss_pred hhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCC
Q 005273 294 RIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDS 373 (704)
Q Consensus 294 ~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~ 373 (704)
.... .......++++...|++......+..++.......+++.|.+.+++.||+|+++++|+++..+++++++|.+.++
T Consensus 97 ~~~~-~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G 175 (447)
T 2i0z_A 97 SAFS-IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG 175 (447)
T ss_dssp HHHH-HSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC
T ss_pred HHHH-hcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC
Confidence 1000 011235667888899987766555555545566789999999999999999999999999988888889988765
Q ss_pred CCCCCCceeEEecCeEEEcCCCCh-------HHHHHHHHhCCCccccc-ceeeEEEEecchhhhcccccccchhhhcccC
Q 005273 374 KDNSQSDIQKLGFDAVILAVGHSA-------RDIYEMLVSHNINLVPK-DFAVGLRMEHPQELINSIQYSELATEVQKGR 445 (704)
Q Consensus 374 ~~~~~~~~~~i~Ad~VVlAtG~~s-------~~~~~~l~~~gi~l~~~-~~avG~~~~~p~~~~~~~~~~~l~~e~~~g~ 445 (704)
..+.||.||+|+|+++ .+.+.+++..|+.+.+. +..+++....+ .... ..+. |
T Consensus 176 --------~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~~~~--~~~~---~~~~-----g- 236 (447)
T 2i0z_A 176 --------EVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEP--FIRD---RSLQ-----G- 236 (447)
T ss_dssp --------CEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCEEEEEECSCCEECCCH--HHHT---TTTT-----T-
T ss_pred --------CEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCcccCcceeeeeecCCc--cccc---cccc-----C-
Confidence 2599999999999987 35567888899887543 22222222111 0000 0000 0
Q ss_pred CCCcccccccee--cccCCCCCCCCccccchhhhhhhhccCCceEEEccCCCCcceecCcccccCCCccccc---e-eEE
Q 005273 446 GKVPVADYKVAK--YVSGEDGDALSGVVTTNRSCYSFCMCPGGQIVLTSTNPLELCINGMSFSRRSSRWANA---A-LVV 519 (704)
Q Consensus 446 g~~~~~d~~~~~--~~~~~~~~e~a~Rd~~~r~v~~fc~~~gG~vv~~~~~~~~~~vng~s~~~r~~~~~n~---~-~~~ 519 (704)
+.+.+..+.. ..+.+ + ....|++++++++.++..+...|.... ...+. . ...
T Consensus 237 --~~~~~~~~~~~~~~g~r-----------------~-~~~~ge~~~t~~~~~g~~~l~~s~~~~--~~~~~~~~~~~~~ 294 (447)
T 2i0z_A 237 --LALRDINLSVLNPKGKA-----------------I-ISHKMDMLFTHFGLSGPAALRCSQFVV--KALKKFKTNTIQM 294 (447)
T ss_dssp --CEEEEEEEEECC----C-----------------E-EEEEEEEEECSSEEESHHHHHHHHHHH--HHHHHHCCSCEEE
T ss_pred --cccCCeEEEEEecCCce-----------------E-ecccCCeEEECCcccHHHHHHHHHHHH--HHHhcccCCceEE
Confidence 1100111100 00110 1 122467888888777766532221100 00001 1 111
Q ss_pred eeecCCcCcccCCCCchhhHHHHHHHHHHHHhCCCceeeccccHHhhhcCCCCCCCCCCCccc-CceeEccCCccChHHH
Q 005273 520 TVSAKDFDTLDLHGPLAGVKFQREFEQRAAIMGGGNFVVPAQKVTDFLENKLSASPLPPSSYR-LGVKAASLHELFPTHL 598 (704)
Q Consensus 520 ~v~~~d~~p~~~~~~l~g~~~~~~~e~~a~~~gg~~~~~p~q~l~dfl~~~~~~~~l~~~~~~-~~~~~~~l~~~~p~~~ 598 (704)
..|+.| .++..++.+.+.+.. ... +.+.+..++.+.+.... .+.... .++.+..-...+.+..
T Consensus 295 ---~~d~~~-----~~~~~~~~~~l~~~~---~~~----~~~~l~~~l~~~~~~~~-~~~l~~~~~i~~~~~~~~~~~~~ 358 (447)
T 2i0z_A 295 ---SIDALP-----EENSEQLFQRMLKQM---KED----PKKGIKNVLKGYVPERY-FLFLLEKNEIDGSEQAGQVSHEK 358 (447)
T ss_dssp ---EEESCT-----TSCHHHHHHHHHHHH---TTS----TTSBHHHHTTTSSCHHH-HHHHHHHTTCCTTSBGGGSCHHH
T ss_pred ---EEECCC-----CCCHHHHHHHHHHHH---HhC----hhhhHHHhccccChHHH-HHHHHHHcCCCcCCchhhCCHHH
Confidence 133443 223344544443322 111 24556665543221000 000000 0111111112233334
Q ss_pred HHHHHHHHHhhhhc---CCCCCCCCeEEEEEEeeecCceeccCCCCCccccCcCCeeEcccc---chhhHH--HHHHHHH
Q 005273 599 TDALKHSISMFDEE---LPGFISDTGLLHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEG---AGYAGG--IVSAAAD 670 (704)
Q Consensus 599 ~~~l~~~l~~~~~~---~~G~~~~~a~~~Gve~~~~~p~~i~~~~~tles~~i~GLy~~GE~---aG~~GG--i~sA~~~ 670 (704)
.+.+.+.++.+... ..+|...+.++|||.+++ +|+.|||++.|||||+|||+ .|++|| +++||++
T Consensus 359 ~~~l~~~~~~~~~~~~~~~~~~~a~~T~GGv~~~~-------i~~~t~~~~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~ 431 (447)
T 2i0z_A 359 IRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKE-------INPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVT 431 (447)
T ss_dssp HHHHHHHHHHEEEEECEECCGGGCSSEEEEECGGG-------EETTTTEESSSBTEEECGGGBSCBCCTTTHHHHHHHHH
T ss_pred HHHHHHHhhCCEEEecCCCCccEEEEeCCceeeec-------ccccccccCcCCCEEEEEeeccCccCCCcHHHHHHHHH
Confidence 45777888887633 367777899999999999 56689999999999999999 688888 7899999
Q ss_pred HHHHHHHHHhhc
Q 005273 671 GMYAGFAVAKDF 682 (704)
Q Consensus 671 G~~Aa~~i~~~~ 682 (704)
|..||+.+.+..
T Consensus 432 G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 432 GRIAGTTAGENA 443 (447)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 999999987653
No 5
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.92 E-value=8.9e-24 Score=240.55 Aligned_cols=104 Identities=17% Similarity=0.255 Sum_probs=91.0
Q ss_pred CceeEccCCccChHHHHHHHHHHHHhhhhcCCCCCCCCeE--EEEEEeeecCceeccCCCCCccccCcCCeeEccccchh
Q 005273 583 LGVKAASLHELFPTHLTDALKHSISMFDEELPGFISDTGL--LHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEGAGY 660 (704)
Q Consensus 583 ~~~~~~~l~~~~p~~~~~~l~~~l~~~~~~~~G~~~~~a~--~~Gve~~~~~p~~i~~~~~tles~~i~GLy~~GE~aG~ 660 (704)
..+++.+++..+|.+++..+. +.+||+.+++.+ .|++|+++.+|.++. .|||+|.++|||||||++|+
T Consensus 332 ~~~y~~G~stslp~~~Q~~~~-------~~ipGle~a~~~r~Gy~ieyd~i~p~~l~---~tLe~k~~~gLf~AGqinGt 401 (637)
T 2zxi_A 332 IEIYPNGLSTSLPEEVQWEMY-------RSIPGLENVVLIRPAYAIEYDVVPPTELY---PTLETKKIRGLFHAGNFNGT 401 (637)
T ss_dssp CEEEEETCCCCSCHHHHHHHH-------TTSTTCTTCCEEECCEEEEEEECCGGGBC---TTSBBSSSBTEEECGGGGTB
T ss_pred ceeeecCCCCcCCHHHHHHHH-------hhCcCcccceEeccccccccceEchhhcC---ccccccCCCCEEEeeecCCc
Confidence 346788999999999887766 445999999999 666688898998876 78999999999999999998
Q ss_pred hHH---HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhh
Q 005273 661 AGG---IVSAAADGMYAGFAVAKDFGLFPADIESILGKA 696 (704)
Q Consensus 661 ~GG---i~sA~~~G~~Aa~~i~~~~~~~~~~~~~~~g~~ 696 (704)
+|+ ++|++++|++||..+..+.++.+.|.++|||+-
T Consensus 402 ~GyeEAaaqGl~AG~nAa~~~~~~~~~~~~r~~ayig~l 440 (637)
T 2zxi_A 402 TGYEEAAGQGIVAGINAALRAFGKEPIYLRRDESYIGVM 440 (637)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCCChhheehhhH
Confidence 877 679999999999999999999999999999973
No 6
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.91 E-value=1.7e-23 Score=239.06 Aligned_cols=104 Identities=20% Similarity=0.219 Sum_probs=91.1
Q ss_pred CceeEccCCccChHHHHHHHHHHHHhhhhcCCCCCCCCeE--EEEEEeeecCceeccCCCCCccccCcCCeeEccccchh
Q 005273 583 LGVKAASLHELFPTHLTDALKHSISMFDEELPGFISDTGL--LHGVETRTSCPLQIPRNNETCESTSLKGLYPVGEGAGY 660 (704)
Q Consensus 583 ~~~~~~~l~~~~p~~~~~~l~~~l~~~~~~~~G~~~~~a~--~~Gve~~~~~p~~i~~~~~tles~~i~GLy~~GE~aG~ 660 (704)
..+++.+++..+|.+++..+.++| ||+.+++.+ .|+||+++.+|.++. .|||+|.++|||||||++|.
T Consensus 327 ~~~y~~G~st~lp~~~q~~~~~~i-------pGle~a~i~r~Gy~ieyd~i~p~~L~---~tle~k~~~gLf~AGqinGt 396 (651)
T 3ces_A 327 NEIYPNGISTSLPFDVQMQIVRSM-------QGMENAKIVRPGYAIEYDFFDPRDLK---PTLESKFIQGLFFAGQINGT 396 (651)
T ss_dssp CEEEEETCCCCSCHHHHHHHHHTS-------TTCTTCCEEECCEEEEEEEECGGGBC---TTSBBSSSBTEEECSGGGTC
T ss_pred CeeeecCCCCCCCHHHHHHHHhhC-------CCccceEEEeccceeccCccchhhcC---ccccccCCCCeEEEEEecCC
Confidence 357888999999999987777554 999999998 555999999999886 68999999999999999998
Q ss_pred hHH---HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhh
Q 005273 661 AGG---IVSAAADGMYAGFAVAKDFGLFPADIESILGKA 696 (704)
Q Consensus 661 ~GG---i~sA~~~G~~Aa~~i~~~~~~~~~~~~~~~g~~ 696 (704)
+|+ ++|++++|++||..+..+.++.+.|.++|||+-
T Consensus 397 tGYeEAaaqGl~AG~nAa~~~~~~~~~~~~r~~ayiG~l 435 (651)
T 3ces_A 397 TGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVL 435 (651)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTCHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHhcCCCCCCCChhhhhhhhH
Confidence 877 678899999999999888899999999999974
No 7
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.89 E-value=2.3e-22 Score=229.73 Aligned_cols=104 Identities=17% Similarity=0.190 Sum_probs=86.1
Q ss_pred CceeEccCCccChHHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEe--eecCceeccCCCCCccccCcCCeeEccccchh
Q 005273 583 LGVKAASLHELFPTHLTDALKHSISMFDEELPGFISDTGLLHGVET--RTSCPLQIPRNNETCESTSLKGLYPVGEGAGY 660 (704)
Q Consensus 583 ~~~~~~~l~~~~p~~~~~~l~~~l~~~~~~~~G~~~~~a~~~Gve~--~~~~p~~i~~~~~tles~~i~GLy~~GE~aG~ 660 (704)
..+++.+++..+|...+..+.+. ++|+.+++.+.+|+.+ ++.+|.++. +|||++.++|||||||++|.
T Consensus 321 ~~~~~~g~st~l~~~~q~~~~~~-------i~gle~a~~~~~G~~~~y~~i~p~~l~---~tle~k~~~gLf~AGqi~g~ 390 (641)
T 3cp8_A 321 VEMYVNGFSTSLPEDIQIAGLRS-------IPGLEEAKMIRPGYAIEYDFFHPWQIR---STMETRPVENLFFAGQINGT 390 (641)
T ss_dssp CEEEEETCCCCSCHHHHHHHHTT-------STTCTTCCEEECCEEEEEEEECGGGBC---TTSBBSSSBTEEECSGGGTB
T ss_pred CceecCCccccccHHHHHHHHhc-------CcchhhceEecceeeecceEECHHHcC---CcccccCcCCEEEEEeecCC
Confidence 45788899999999887666644 4999999999666655 777888775 78999999999999999888
Q ss_pred hHH---HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhh
Q 005273 661 AGG---IVSAAADGMYAGFAVAKDFGLFPADIESILGKA 696 (704)
Q Consensus 661 ~GG---i~sA~~~G~~Aa~~i~~~~~~~~~~~~~~~g~~ 696 (704)
+|. +++++++|++||..+..+.++.+.|.++|||+-
T Consensus 391 ~Gy~eA~a~G~~AG~naa~~~~~~~~~~~~r~~~y~g~l 429 (641)
T 3cp8_A 391 SGYEEAAAQGLMAGINAVRKILGKELIVLGRDQAYIGVL 429 (641)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhhHHHHH
Confidence 866 567777788888888888899999999999974
No 8
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.86 E-value=1.7e-20 Score=215.45 Aligned_cols=245 Identities=20% Similarity=0.239 Sum_probs=144.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccc--cccC------------Cc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFC--FGEG------------GA 283 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~--~g~g------------G~ 283 (704)
..+||+|||+|++||++|+.|+++|++|+|+|+.+.+++.....++.+ .......+ .+.. ..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~----~~~~~~~~~~~g~~ds~~~~~~~~~~~g 200 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGM----NAAETKPQAKLGIEDKKQIMIDDTMKGG 200 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCE----ECCSSSTTGGGTCCCCTHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCee----EccCCHHHHHhCCCCCHHHHHHHHHHhc
Confidence 357999999999999999999999999999999988765432111100 00000000 0000 00
Q ss_pred ccccCcchhhhhccCchhHHHHHHHHHHcCCCceeec--CCcccc-------CCCChHHHHHHHHHHHHHCCCEEEeCeE
Q 005273 284 GTWSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILV--DGKSHL-------GTDRLIPLLRNFRQHLQRLGVTIKFGTR 354 (704)
Q Consensus 284 ~~~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~--~g~~~~-------g~~~~~~l~~~L~~~l~~~Gv~i~~~t~ 354 (704)
....+..++..+... ....++|+...|+++..+. .+.... +......++..|.+.+++.||+|+++++
T Consensus 201 ~~~~~~~~v~~~~~~---~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~ 277 (572)
T 1d4d_A 201 RNINDPELVKVLANN---SSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSR 277 (572)
T ss_dssp TTCSCHHHHHHHHHT---HHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEE
T ss_pred CCCCCHHHHHHHHHc---cHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCE
Confidence 001223333333222 3345677888888875432 222111 1112456889999999999999999999
Q ss_pred EEEEEEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc-----cccceeeE------EEE
Q 005273 355 VDDLLIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL-----VPKDFAVG------LRM 422 (704)
Q Consensus 355 V~~i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l-----~~~~~avG------~~~ 422 (704)
|++|+.++ ++|+||++.+.++ +...+.||.||+|||+++.+. ++++.+...+ ...+...| .++
T Consensus 278 v~~l~~~~~g~v~GV~~~~~~G----~~~~i~A~~VVlAtGg~~~~~-~~~~~~~p~~~~~~~~~~~~~tGdgi~~a~~~ 352 (572)
T 1d4d_A 278 VVRILEDASGKVTGVLVKGEYT----GYYVIKADAVVIAAGGFAKNN-ERVSKYDPKLKGFKATNHPGATGDGLDVALQA 352 (572)
T ss_dssp EEEEEEC--CCEEEEEEEETTT----EEEEEECSEEEECCCCCTTCH-HHHHHHCGGGTTCCBSSCTTCSSHHHHHHHHT
T ss_pred EEEEEECCCCeEEEEEEEeCCC----cEEEEEcCEEEEeCCCCccCH-HHHHHhCccccCCCccCCCCCccHHHHHHHHc
Confidence 99998887 8999998874222 234789999999999988542 3444332211 00111111 011
Q ss_pred ecchhhhccccc--------ccchhhhcccCCCCccccccceecccCCCCCCCCccccchhhhhhh
Q 005273 423 EHPQELINSIQY--------SELATEVQKGRGKVPVADYKVAKYVSGEDGDALSGVVTTNRSCYSF 480 (704)
Q Consensus 423 ~~p~~~~~~~~~--------~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~~~r~v~~f 480 (704)
......++.+|+ +.+.++.+++.+. .+++..++||++|+++||.++++++..
T Consensus 353 Ga~~~~~~~~q~~p~~~~~~~~l~~~~~~~~g~------i~vn~~G~RF~~E~~~~~~~~~ai~~~ 412 (572)
T 1d4d_A 353 GAATRDLQYIQAHPTYSPAGGVMITEAVRGNGA------IVVNREGNRFMNEITTRDKASAAILQQ 412 (572)
T ss_dssp TBCEECTTCEEEEEEEETTTTEECCHHHHHTTC------EEECTTSCCCSCTTSCHHHHHHHHHTS
T ss_pred CCeEeCCCceeEecccCCCccccchhhhccCce------EEECCCCCCccCCCCCHhHHHHHHHhC
Confidence 111111122222 2233444455443 455678999999999999999999863
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.85 E-value=1.9e-20 Score=215.14 Aligned_cols=250 Identities=18% Similarity=0.201 Sum_probs=144.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHH------HHHhhcccccc-cc-c--cCCccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALV------VRRMLEMESNF-CF-G--EGGAGTWS 287 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~------~~~~l~~~~n~-~~-g--~gG~~~~s 287 (704)
..+||+|||||++||+||+.|+++|++|+|+||.+..++.+...++.+ ....+...... .+ . ..+.....
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 357999999999999999999999999999999988765432111100 00000000000 00 0 00000113
Q ss_pred CcchhhhhccCchhHHHHHHHHHHcCCCceee--cCCcccc-------CCCChHHHHHHHHHHHHHCCCEEEeCeEEEEE
Q 005273 288 DGKLVTRIGRNSNSVLAVMNTLVHFGAPANIL--VDGKSHL-------GTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDL 358 (704)
Q Consensus 288 dg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~--~~g~~~~-------g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i 358 (704)
+.+++..+.. .....++|+...|+++..+ ..+..+. +......+++.|.+.+++.||+|+++++|++|
T Consensus 205 ~~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 205 DPALVKVLSS---HSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEV 281 (571)
T ss_dssp CHHHHHHHHH---HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEE
T ss_pred CHHHHHHHHH---ccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEe
Confidence 3344333322 2345667888889887532 1222111 11223568899999999999999999999999
Q ss_pred EEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCc-----ccccceeeE------EEEecch
Q 005273 359 LIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNIN-----LVPKDFAVG------LRMEHPQ 426 (704)
Q Consensus 359 ~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~-----l~~~~~avG------~~~~~p~ 426 (704)
+.++ ++|+||++.+.++ +..++.||.||+|||+++.+. +++..+... ..+.+...| .++....
T Consensus 282 ~~~~~g~v~Gv~~~~~~g----~~~~i~a~~VVlAtGg~~~n~-~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~~ 356 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYK----GYYWVKADAVILATGGFAKNN-ERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGAL 356 (571)
T ss_dssp EECTTSCEEEEEEEETTT----EEEEEECSEEEECCCCCTTCH-HHHHHHCGGGTTCCBCSCTTCSSHHHHHHHHTTCCE
T ss_pred EEcCCCeEEEEEEEeCCC----cEEEEECCeEEEeCCCcccCH-HHHHHhCccccCCcccCCCCCchHHHHHHHHcCCcE
Confidence 9887 8999998875222 234789999999999987532 333322111 011111111 0111111
Q ss_pred hhhcccccc--------cchhhhcccCCCCccccccceecccCCCCCCCCccccchhhhhhhh
Q 005273 427 ELINSIQYS--------ELATEVQKGRGKVPVADYKVAKYVSGEDGDALSGVVTTNRSCYSFC 481 (704)
Q Consensus 427 ~~~~~~~~~--------~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~~~r~v~~fc 481 (704)
..++.+++. .+..+.+++.+. .+++..++||++|+++||.++++++..+
T Consensus 357 ~~~~~~~~~p~~~~~~~~~~~~~~~~~g~------i~vn~~G~RF~~E~~~~~~~~~a~~~~~ 413 (571)
T 1y0p_A 357 KDMQYIQAHPTLSVKGGVMVTEAVRGNGA------ILVNREGKRFVNEITTRDKASAAILAQT 413 (571)
T ss_dssp ECTTCEEEEEEEETTTCSBCCTHHHHTTC------EEECTTSCCCSCTTSCHHHHHHHHHTSG
T ss_pred eCCcceeecCcccCCCCceeeecccCCce------EEECCCCCCCcCCCCcHhHHHHHHHhCc
Confidence 111112211 122233344332 4556778999999999999999998653
No 10
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.85 E-value=8.3e-21 Score=218.82 Aligned_cols=245 Identities=21% Similarity=0.200 Sum_probs=159.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhc--cccccc--cc--cCCcccccCcchh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLE--MESNFC--FG--EGGAGTWSDGKLV 292 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~--~~~n~~--~g--~gG~~~~sdg~l~ 292 (704)
.+||||||+|+|||+||+.|++.|++|+|+||....++.+....+.+. ..+. ...++. +. ..+.....+.+++
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~-a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGIN-AALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEE-CCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcE-ecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 469999999999999999999999999999998765433211100000 0000 000000 00 0000111233333
Q ss_pred hhhccCchhHHHHHHHHHHcCCCceeecCCccc----cC-----------------CC-ChHHHHHHHHHHHHHCCCEEE
Q 005273 293 TRIGRNSNSVLAVMNTLVHFGAPANILVDGKSH----LG-----------------TD-RLIPLLRNFRQHLQRLGVTIK 350 (704)
Q Consensus 293 ~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~----~g-----------------~~-~~~~l~~~L~~~l~~~Gv~i~ 350 (704)
..+.. .....++++.++|+++.....+..+ .+ .+ ....++..|.+.+.+.|++|+
T Consensus 97 ~~l~~---~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~ 173 (621)
T 2h88_A 97 HYMTE---QAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYF 173 (621)
T ss_dssp HHHHH---HHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEE
T ss_pred HHHHH---HHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEE
Confidence 33322 1344667888999988765433211 00 01 234688999999988999999
Q ss_pred eCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH-------------HHHHHHHhCCCccccccee
Q 005273 351 FGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------DIYEMLVSHNINLVPKDFA 417 (704)
Q Consensus 351 ~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------~~~~~l~~~gi~l~~~~~a 417 (704)
+++.|++|+.++++|.||.+.+..+ ++...+.|+.||+|||++++ +.+.|+...|..+....+
T Consensus 174 ~~~~v~~Li~~~g~v~Gv~~~~~~~---G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~- 249 (621)
T 2h88_A 174 VEYFALDLLMENGECRGVIALCIED---GTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEF- 249 (621)
T ss_dssp ETEEEEEEEEETTEEEEEEEEETTT---CCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC-
T ss_pred EceEEEEEEEECCEEEEEEEEEcCC---CcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcc-
Confidence 9999999999899999998864211 12357999999999999873 566788888887766544
Q ss_pred eEEEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCCC-------CCCccccchhhhhhhhcc
Q 005273 418 VGLRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDGD-------ALSGVVTTNRSCYSFCMC 483 (704)
Q Consensus 418 vG~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~-------e~a~Rd~~~r~v~~fc~~ 483 (704)
.+.||+.+.. .+.+++|.++|.|.+ +++..++||++ |+++||+++|+++..+..
T Consensus 250 ---~q~hPt~~~~---~~~l~se~~rg~g~i------lvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~ 310 (621)
T 2h88_A 250 ---VQFHPTGIYG---AGCLITEGCRGEGGI------LINSQGERFMERYAPVAKDLASRDVVSRSMTIEIRE 310 (621)
T ss_dssp ---EEEEEEEETT---TCCBCCTHHHHTTCE------EECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHT
T ss_pred ---eeeecccccC---CcceecccccCCccE------EECCCCCCcccccCcccccccchHHHHHHHHHHHHh
Confidence 2346654332 145677888888764 44567788876 899999999999877543
No 11
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.84 E-value=2.3e-20 Score=212.60 Aligned_cols=245 Identities=18% Similarity=0.190 Sum_probs=145.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccc--c---ccCCcccccCcchhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFC--F---GEGGAGTWSDGKLVT 293 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~--~---g~gG~~~~sdg~l~~ 293 (704)
.+||+|||+|++||+||+.|++ |.+|+|+||....++.+....+.+.. .+....+.. + -..+. ...+.+++.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~-~~~~~ds~~~~~~d~l~~g~-g~~d~~~v~ 84 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAA-VFDETDSIDSHVEDTLIAGA-GICDRHAVE 84 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--------------CCSHHHHHHHHHHHHHHTT-TCCCHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEE-ecCCCCCHHHHHHHHHHhhc-ccCCHHHHH
Confidence 4799999999999999999999 99999999998765433221111100 000000000 0 00000 112333333
Q ss_pred hhccCchhHHHHHHHHHHcCCCceeec----CCcc--------------ccCCCChHHHHHHHHHHHHH-CCCEEEeCeE
Q 005273 294 RIGRNSNSVLAVMNTLVHFGAPANILV----DGKS--------------HLGTDRLIPLLRNFRQHLQR-LGVTIKFGTR 354 (704)
Q Consensus 294 ~~~~~~~~~~~~l~~l~~~G~~~~~~~----~g~~--------------~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~ 354 (704)
.+.. .....++++.++|+++.... .+.. +.+......+++.|.+.+++ .|++|++++.
T Consensus 85 ~~~~---~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~ 161 (540)
T 1chu_A 85 FVAS---NARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTN 161 (540)
T ss_dssp HHHH---HHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEE
T ss_pred HHHH---hHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcE
Confidence 3222 13456778888999876543 2211 00101123467778888888 6999999999
Q ss_pred EEEEEE-eCC------EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH-------------HHHHHHHhCCCccccc
Q 005273 355 VDDLLI-ENA------RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------DIYEMLVSHNINLVPK 414 (704)
Q Consensus 355 V~~i~~-~~g------~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------~~~~~l~~~gi~l~~~ 414 (704)
|++|+. +++ +|.||.+.+..+ ++...+.|+.||+|||+++. +.+.|+...|..+...
T Consensus 162 v~~L~~~~~g~~~~~~~v~Gv~~~~~~~---G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~l~~~ 238 (540)
T 1chu_A 162 AVDLIVSDKIGLPGTRRVVGAWVWNRNK---ETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANL 238 (540)
T ss_dssp EEEEEEGGGTTCCSSCBEEEEEEEETTT---TEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCCEECT
T ss_pred EEEEEEcCCCCcccCCEEEEEEEEEcCC---CcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCCCcCh
Confidence 999998 546 899998875211 12347999999999999773 4667777888877765
Q ss_pred ceeeEEEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCC------CCCCccccchhhhhhhhc
Q 005273 415 DFAVGLRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDG------DALSGVVTTNRSCYSFCM 482 (704)
Q Consensus 415 ~~avG~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~------~e~a~Rd~~~r~v~~fc~ 482 (704)
.+. +.||+.+........+++|.++|.+.+ +++..++||+ +|++|||.++|+++....
T Consensus 239 e~~----q~hpt~~~~~~~~~~l~~e~~rg~g~~------lvn~~G~RF~~~~~~~~el~~rd~v~~ai~~~~~ 302 (540)
T 1chu_A 239 EFN----QFHPTALYHPQARNFLLTEALRGEGAY------LKRPDGTRFMPDFDERGELAPRDIVARAIDHEMK 302 (540)
T ss_dssp TCE----EEEEEEECSTTCTTCBCCHHHHHTTCE------EECTTSCBCGGGTCTTGGGSCHHHHHHHHHHHHH
T ss_pred HHH----hhcCeeecCCCCCcceeehhhcCCceE------EECCCCCCCcccCCcccccCcHHHHHHHHHHHHH
Confidence 432 234543222111234667788887754 4456677787 589999999999998743
No 12
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.84 E-value=1.2e-19 Score=210.47 Aligned_cols=243 Identities=18% Similarity=0.173 Sum_probs=155.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch-hHHHHHHhhcc-----ccccc--c-c-cCCcccccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI-GALVVRRMLEM-----ESNFC--F-G-EGGAGTWSD 288 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~-~~~~~~~~l~~-----~~n~~--~-g-~gG~~~~sd 288 (704)
.+||+|||||++||+||+.|++.|.+|+|+||....++.+... ++.. ..+.. ..++. + . ..+.....+
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~--a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQ--ASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEE--CCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeE--eccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 4699999999999999999999999999999987654322111 1000 00000 00000 0 0 000001122
Q ss_pred cchhhhhccCchhHHHHHHHHHHcCCCceeecCCc-------------------------ccc----------CCCChHH
Q 005273 289 GKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGK-------------------------SHL----------GTDRLIP 333 (704)
Q Consensus 289 g~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~-------------------------~~~----------g~~~~~~ 333 (704)
.+++..+.. .....++++.++|+++.....+. .+. .......
T Consensus 83 ~~~v~~~~~---~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~ 159 (660)
T 2bs2_A 83 QKVARMFVN---TAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHT 159 (660)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHH
Confidence 222222221 13446678888998876532211 000 1112346
Q ss_pred HHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh-------------HHH
Q 005273 334 LLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA-------------RDI 400 (704)
Q Consensus 334 l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s-------------~~~ 400 (704)
++..|.+.+.+.|++|++++.|++|+.++++|.||.+.+..+ ++...+.|+.||+|||+++ .+.
T Consensus 160 l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~---G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tGdG 236 (660)
T 2bs2_A 160 MLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVT---GDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTG 236 (660)
T ss_dssp HHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTT---CCEEEEECSEEEECCCCCGGGSSSBSSCTTCSCHH
T ss_pred HHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCC---CcEEEEEcCEEEEccCcchhhcCCCCCCCCcccHH
Confidence 889999999999999999999999998889999998754211 1234699999999999987 467
Q ss_pred HHHHHhCCC-cccccceeeEEEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCC-------CCCCcccc
Q 005273 401 YEMLVSHNI-NLVPKDFAVGLRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDG-------DALSGVVT 472 (704)
Q Consensus 401 ~~~l~~~gi-~l~~~~~avG~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~-------~e~a~Rd~ 472 (704)
+.|+...|. ++....+ .+.||+.+.. .+.+++|.++|.+.+ +++..++||+ .++++||+
T Consensus 237 ~~mA~~aGa~~l~~me~----~q~hPt~~~~---~~~l~se~~rg~g~i------lvn~~G~RF~~~y~p~~~ela~rdv 303 (660)
T 2bs2_A 237 TAIALETGIAQLGNMEA----VQFHPTPLFP---SGILLTEGCRGDGGI------LRDVDGHRFMPDYEPEKKELASRDV 303 (660)
T ss_dssp HHHHHTTSSSCEECTTC----EEEESCBBTT---TCCBCCTHHHHHTCE------EECTTCCBCHHHHCTTTGGGSCHHH
T ss_pred HHHHHHcCCChhcCchh----heecccccCC---CcceecccccCCCcE------EECCCCCCcCcccCcccccccchHH
Confidence 778888888 7766543 2346654332 234667777777654 3445677776 47899999
Q ss_pred chhhhhhhhc
Q 005273 473 TNRSCYSFCM 482 (704)
Q Consensus 473 ~~r~v~~fc~ 482 (704)
++|+++..+.
T Consensus 304 v~rai~~~~~ 313 (660)
T 2bs2_A 304 VSRRMIEHIR 313 (660)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987653
No 13
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.83 E-value=5.5e-20 Score=211.00 Aligned_cols=248 Identities=21% Similarity=0.232 Sum_probs=145.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHH-------HHHHhhcccccc-cc-c--cCCcccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGAL-------VVRRMLEMESNF-CF-G--EGGAGTW 286 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~-------~~~~~l~~~~n~-~~-g--~gG~~~~ 286 (704)
..+||+|||+|++||+||+.|++.|++|+||||.+.+++.+...++. .... ....... .+ . .......
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~-~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTA-HGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHH-TTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHH-hCCCCCHHHHHHHHHHhcCCC
Confidence 45799999999999999999999999999999998876543211110 0000 0000000 00 0 0000011
Q ss_pred cCcchhhhhccCchhHHHHHHHHHHcCCCceeec--CCcccc-------CCCChHHHHHHHHHHHHHCCCEEEeCeEEEE
Q 005273 287 SDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILV--DGKSHL-------GTDRLIPLLRNFRQHLQRLGVTIKFGTRVDD 357 (704)
Q Consensus 287 sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~--~g~~~~-------g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~ 357 (704)
.+..++..+.. .....++|+...|+++..+. .+..+. +......+++.|.+.+++.||+|+++++|++
T Consensus 199 ~~~~~~~~~~~---~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~ 275 (566)
T 1qo8_A 199 NDIKLVTILAE---QSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVK 275 (566)
T ss_dssp SCHHHHHHHHH---HHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEE
T ss_pred CCHHHHHHHHh---ccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 23333333322 23446678888898875432 222111 1122456889999999999999999999999
Q ss_pred EEEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc-----cccceeeE------EEEecc
Q 005273 358 LLIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL-----VPKDFAVG------LRMEHP 425 (704)
Q Consensus 358 i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l-----~~~~~avG------~~~~~p 425 (704)
|+.++ ++|+||++.+.++ +...+.||.||+|||+++.. .+|+..+...+ ...+...| .++...
T Consensus 276 l~~~~~g~v~Gv~~~~~~g----~~~~i~A~~VVlAtGg~s~~-~~~~~~~~p~~~~~~~~~~~~~tGdg~~~a~~~Ga~ 350 (566)
T 1qo8_A 276 LVVNDDHSVVGAVVHGKHT----GYYMIGAKSVVLATGGYGMN-KEMIAYYRPTMKDMTSSNNITATGDGVLMAKEIGAS 350 (566)
T ss_dssp EEECTTSBEEEEEEEETTT----EEEEEEEEEEEECCCCCTTC-HHHHHHHCGGGTTCEECSCTTCSCHHHHHHHHTTBC
T ss_pred EEECCCCcEEEEEEEeCCC----cEEEEEcCEEEEecCCcccC-HHHHHHhCccccCCcccCCCCCCcHHHHHHHHcCCe
Confidence 99888 8999998874222 23468999999999999864 23443332211 00111111 000111
Q ss_pred hhhhccccc--------ccchhhhcccCCCCccccccceecccCCCCCCCCccccchhhhhhh
Q 005273 426 QELINSIQY--------SELATEVQKGRGKVPVADYKVAKYVSGEDGDALSGVVTTNRSCYSF 480 (704)
Q Consensus 426 ~~~~~~~~~--------~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~~~r~v~~f 480 (704)
...++.+++ +.+.++.+++.+. .+++..++||++|+++||.+.+.++..
T Consensus 351 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~------i~vn~~G~Rf~~E~~~~~~~~~~~~~~ 407 (566)
T 1qo8_A 351 MTDIDWVQAHPTVGKDSRILISETVRGVGA------VMVNKDGNRFISELTTRDKASDAILKQ 407 (566)
T ss_dssp EESTTCEEEEEEEESSSCSBCCTHHHHTTC------EEECTTSCCCSCTTSCHHHHHHHHHTS
T ss_pred EecCcceeecccccCCccccchhhhccCCe------EEECCCCCCccCCCCCHHHHHHHHHhC
Confidence 111111221 1223333444432 445677899999999999999999863
No 14
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.82 E-value=7e-20 Score=210.57 Aligned_cols=244 Identities=20% Similarity=0.210 Sum_probs=154.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch-hHHHHHHhhcc--ccccc--c-c-cCCcccccCcch
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI-GALVVRRMLEM--ESNFC--F-G-EGGAGTWSDGKL 291 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~-~~~~~~~~l~~--~~n~~--~-g-~gG~~~~sdg~l 291 (704)
.+||+|||||++||+||+.|++.|.+|+|+||....++.+... ++.. ..+.. ...+. + . ..+.....+.++
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~--~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGIT--VALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEE--CCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccE--EcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 4699999999999999999999999999999997764322110 1000 00000 00000 0 0 000001122333
Q ss_pred hhhhccCchhHHHHHHHHHHcCCCceeecCCccc----cCC-----------------CChHHHHHHHHHHHHHCCCEEE
Q 005273 292 VTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSH----LGT-----------------DRLIPLLRNFRQHLQRLGVTIK 350 (704)
Q Consensus 292 ~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~----~g~-----------------~~~~~l~~~L~~~l~~~Gv~i~ 350 (704)
+..+... ....++++.++|+++.....++.+ .+. .....++..|.+.+++.|++|+
T Consensus 85 v~~~~~~---~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~ 161 (588)
T 2wdq_A 85 IEYMCKT---GPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIF 161 (588)
T ss_dssp HHHHHHH---HHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHh---HHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 3322221 234667888899988754433211 010 1135688899999999999999
Q ss_pred eCeEEEEEEEe-CCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH-------------HHHHHHHhCCCcccccce
Q 005273 351 FGTRVDDLLIE-NARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------DIYEMLVSHNINLVPKDF 416 (704)
Q Consensus 351 ~~t~V~~i~~~-~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------~~~~~l~~~gi~l~~~~~ 416 (704)
+++.|++|+.+ +++|+||.+.+..+ ++...+.|+.||+|||+++. +.+.|+...|..+....+
T Consensus 162 ~~~~v~~L~~~~~g~v~Gv~~~~~~~---g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~ 238 (588)
T 2wdq_A 162 SEWYALDLVKNQDGAVVGCTALCIET---GEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEM 238 (588)
T ss_dssp ETEEEEEEEECTTSCEEEEEEEETTT---CCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC
T ss_pred eCcEEEEEEECCCCEEEEEEEEEcCC---CeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhH
Confidence 99999999986 78899998764211 12347899999999999763 466777778877766543
Q ss_pred eeEEEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCCC-------CCCccccchhhhhhhhcc
Q 005273 417 AVGLRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDGD-------ALSGVVTTNRSCYSFCMC 483 (704)
Q Consensus 417 avG~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~-------e~a~Rd~~~r~v~~fc~~ 483 (704)
. +.||+.+.. .+.+++|.++|.|.+ +++..++||++ |+++||+++|+++..+..
T Consensus 239 ~----q~hpt~~~~---~~~l~~e~~rg~g~i------lvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~ 299 (588)
T 2wdq_A 239 W----QFHPTGIAG---AGVLVTEGCRGEGGY------LLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIRE 299 (588)
T ss_dssp E----EEEEEEETT---TCCBCCTHHHHTTCE------EECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHT
T ss_pred h----heecceecC---CcceeeehhccCCcE------EECCCCCCCccccCcccchhccHHHHHHHHHHHHHh
Confidence 2 235543321 123566777787654 44566778876 899999999999876543
No 15
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.81 E-value=1.7e-20 Score=220.16 Aligned_cols=184 Identities=22% Similarity=0.273 Sum_probs=139.0
Q ss_pred eeEee--ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC-
Q 005273 39 AIRCA--KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS- 115 (704)
Q Consensus 39 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~- 115 (704)
.+|.+ +...++....|...+.+..++ ++|+++++.|.|... ..|....+ .|++.++++.||+.+++||+.
T Consensus 228 ~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~--~~~~~~~~----~~~~~~~~~~i~~~~~~pvi~~ 300 (690)
T 3k30_A 228 ACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGD--SVTSRFAP----EGRQEEFVAGLKKLTTKPVVGV 300 (690)
T ss_dssp EEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHH--TCCTTTCC----TTTTHHHHTTSGGGCSSCEEEC
T ss_pred EEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEeccccccc--CCCCccCC----ccccHHHHHHHHHHcCCeEEEe
Confidence 56643 444556667888889888877 799999999975432 22322222 478889999999999999963
Q ss_pred --CC-hhhHHHHHhcc-cc----cccccCCCeEEEEEEEeeccccccCCchhhhhhccccccccccccccccccCCceee
Q 005273 116 --ML-PAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLEAKVGSVEHMLDKRASGDLINI 187 (704)
Q Consensus 116 --~~-p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~v~i 187 (704)
+. |+.|+++++.+ +| +|+.|+||+|+.|+..+..++ +++|++|+. |.... ..+.++
T Consensus 301 G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~~~~------i~~c~~c~~-C~~~~-------~~~~~~-- 364 (690)
T 3k30_A 301 GRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNL------IRECIGCNI-CVSGD-------LTMSPI-- 364 (690)
T ss_dssp SCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCGGG------CCCCCCCCH-HHHHH-------HTTSCC--
T ss_pred CCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcCCccc------cccccchhh-hhhcc-------cCCCcc--
Confidence 55 99999999777 89 999999999999999998754 788999875 43321 122333
Q ss_pred ecccccccchhhhhhhhccCCCCc-----c-CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 188 IHDCKKVSDDTLLRKEISSGSEGL-----Y-NYPRTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 188 ~~~c~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.|.+||.. ++|.. . ..+....++|+|||||++||+||+.|+++|++|+|+|+++..|+
T Consensus 365 --~C~vnp~~---------g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG 428 (690)
T 3k30_A 365 --RCTQNPSM---------GEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGG 428 (690)
T ss_dssp --CCSSCTTT---------TTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred --cCCcCccc---------CcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 49999853 33322 1 12445578999999999999999999999999999999887765
No 16
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.81 E-value=1.3e-18 Score=200.49 Aligned_cols=243 Identities=21% Similarity=0.266 Sum_probs=148.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCccccccccch-hHHHHHHhhccccccc--c--ccCCcccccCcch
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQAVEQRGRDI-GALVVRRMLEMESNFC--F--GEGGAGTWSDGKL 291 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~~~~~~~~~-~~~~~~~~l~~~~n~~--~--g~gG~~~~sdg~l 291 (704)
.+||+|||||++||+||+.|++.| .+|+|+||....++.+... ++.. ..+.....+. + ...+.....+..+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~--~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSA--AVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEE--CCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccE--EeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 469999999999999999999999 9999999987654321100 0000 0000000000 0 0000001122223
Q ss_pred hhhhccCchhHHHHHHHHHHcCCCceeecCCcccc----C----------CCChHHHHHHHHHHHHHCC-CEEEeCeEEE
Q 005273 292 VTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHL----G----------TDRLIPLLRNFRQHLQRLG-VTIKFGTRVD 356 (704)
Q Consensus 292 ~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~----g----------~~~~~~l~~~L~~~l~~~G-v~i~~~t~V~ 356 (704)
+..+.. .....++++..+|+++.....+..+. + ......++..|.+.+++.| +++++++.|+
T Consensus 83 v~~~~~---~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~ 159 (602)
T 1kf6_A 83 VDYFVH---HCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVL 159 (602)
T ss_dssp HHHHHH---HHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEE
T ss_pred HHHHHH---HHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEE
Confidence 222221 12345677888999887544332110 1 0113468889999998888 9999999999
Q ss_pred EEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH-------------HHHHHHHhCCCcccccceeeEEEEe
Q 005273 357 DLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------DIYEMLVSHNINLVPKDFAVGLRME 423 (704)
Q Consensus 357 ~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------~~~~~l~~~gi~l~~~~~avG~~~~ 423 (704)
+|+.++++|.||.+.+..+ ++...+.|+.||+|||+++. +.+.+....|..+....+ .+.
T Consensus 160 ~l~~~~g~v~Gv~~~~~~~---G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~----~qf 232 (602)
T 1kf6_A 160 DILVDDGHVRGLVAMNMME---GTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEF----VQY 232 (602)
T ss_dssp EEEEETTEEEEEEEEETTT---TEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTC----EEE
T ss_pred EEEEeCCEEEEEEEEEcCC---CcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhH----hhc
Confidence 9999999999997754211 12347999999999999764 345566666665554432 223
Q ss_pred cchhhhcccccccchhhhcccCCCCccccccceecccCCCCC------------------CCCccccchhhhhhhhc
Q 005273 424 HPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDGD------------------ALSGVVTTNRSCYSFCM 482 (704)
Q Consensus 424 ~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~------------------e~a~Rd~~~r~v~~fc~ 482 (704)
||+.... .+.+++|.++|.|.+.+ +..++||++ |+++||.++|+++..+.
T Consensus 233 hPt~~~~---~~~l~~e~~rg~g~~lv------n~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~ 300 (602)
T 1kf6_A 233 HPTGLPG---SGILMTEGCRGEGGILV------NKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR 300 (602)
T ss_dssp EEEECTT---TCCBCCTHHHHTTCEEE------CTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHH
T ss_pred cccccCC---CcceechhhcCCceEEE------CCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHH
Confidence 5543321 23466777788776443 445556554 68899999999987654
No 17
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.80 E-value=1.7e-18 Score=196.02 Aligned_cols=245 Identities=19% Similarity=0.206 Sum_probs=140.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHH--------HHHHhhccccccc----cccCCccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGAL--------VVRRMLEMESNFC----FGEGGAGT 285 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~--------~~~~~l~~~~n~~----~g~gG~~~ 285 (704)
..+||+|||+|++||+||+.|+++|++|+|+||.+..++.+...++. +... +....... ........
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~-~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKA-CGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHH-TTCCCCHHHHHHHHHHHSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHH-hCCCCCHHHHHHHHHHHhCC
Confidence 35799999999999999999999999999999999877643211110 0000 00000000 00000001
Q ss_pred ccCcchhhhhccCchhHHHHHHHHHHcCCCceeec----------------CC----cc-----------c--------c
Q 005273 286 WSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILV----------------DG----KS-----------H--------L 326 (704)
Q Consensus 286 ~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~----------------~g----~~-----------~--------~ 326 (704)
..+..++..+... ....++|+.+.|+++.... .+ .+ | .
T Consensus 119 ~~~~~~~~~~~~~---~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~ 195 (510)
T 4at0_A 119 GADEEKITDYCEG---SVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRT 195 (510)
T ss_dssp SCCHHHHHHHHHT---HHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBT
T ss_pred CCCHHHHHHHHHh---hHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeeccccccc
Confidence 1223333333222 2345677778888764321 00 00 0 0
Q ss_pred CCCCh-HHHHHHHHHHHHHCCCEEEeCeEEEEEEEe-CCEEEEEEEcCCCCCCCCceeEEecC-eEEEcCCCChHHHHHH
Q 005273 327 GTDRL-IPLLRNFRQHLQRLGVTIKFGTRVDDLLIE-NARIVGVKVSDSKDNSQSDIQKLGFD-AVILAVGHSARDIYEM 403 (704)
Q Consensus 327 g~~~~-~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~-~g~v~GV~~~~~~~~~~~~~~~i~Ad-~VVlAtG~~s~~~~~~ 403 (704)
+.... ..+++.|.+.+++.|++|+++++|++|+.+ +++|+||.+.+.. +..++.|+ .||+|||+++.+ .+|
T Consensus 196 g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g-----~~~~i~A~k~VVlAtGG~~~n-~~m 269 (510)
T 4at0_A 196 GEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYG-----KEVAVRARRGVVLATGSFAYN-DKM 269 (510)
T ss_dssp TTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETT-----EEEEEEEEEEEEECCCCCTTC-HHH
T ss_pred ccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECC-----cEEEEEeCCeEEEeCCChhhC-HHH
Confidence 01111 268899999999999999999999999998 6899999987642 23579995 999999999864 245
Q ss_pred HHhCCCcccc-----cceeeE------EEEecchhhhcccccccchhhhcccCCCCccccccceecccCCCCCCCCcccc
Q 005273 404 LVSHNINLVP-----KDFAVG------LRMEHPQELINSIQYSELATEVQKGRGKVPVADYKVAKYVSGEDGDALSGVVT 472 (704)
Q Consensus 404 l~~~gi~l~~-----~~~avG------~~~~~p~~~~~~~~~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~e~a~Rd~ 472 (704)
++++...+.. .+...| .++......++.++..+..... ......+++..++||++|+.+|+.
T Consensus 270 ~~~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~~~~~-------~~~~~i~vn~~G~RF~nE~~~~~~ 342 (510)
T 4at0_A 270 IEAHAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFVCDPQ-------LIVRGILVNGRGQRYVPEDTYSGR 342 (510)
T ss_dssp HHHHCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEECSCHH-------HHTTSEEECTTSCBCSCTTSCHHH
T ss_pred HHHhCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCccChh-------hccccEEECCCCCCCCCCCccHHH
Confidence 5544332211 111111 1111111112222211111000 001125667889999999999988
Q ss_pred chhhhhh
Q 005273 473 TNRSCYS 479 (704)
Q Consensus 473 ~~r~v~~ 479 (704)
+++.++.
T Consensus 343 ~~~~~~~ 349 (510)
T 4at0_A 343 IGQMTLF 349 (510)
T ss_dssp HHHCCCC
T ss_pred HHHHHHh
Confidence 8877754
No 18
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.79 E-value=1.5e-19 Score=209.72 Aligned_cols=250 Identities=14% Similarity=0.100 Sum_probs=148.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc------CCcEEEEEeCccccccccchhHHHHHHhhccc---cccccc-cCCcccccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL------GADVTLIERGQAVEQRGRDIGALVVRRMLEME---SNFCFG-EGGAGTWSD 288 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~------g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~---~n~~~g-~gG~~~~sd 288 (704)
.+||||||||+|||+||+.|++. |.+|+|+||....+......+.......+... ..+... ..+. ...+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~-gl~d 100 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLM-GLVR 100 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTT-TCCC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcC-CCcc
Confidence 47999999999999999999997 99999999987543221110100000000000 000000 0000 1223
Q ss_pred cchhhhhccCchhHHHHHHHHHHcCCCceee-cCCccc-------------------c-----CCCChHHHHHHHHHHHH
Q 005273 289 GKLVTRIGRNSNSVLAVMNTLVHFGAPANIL-VDGKSH-------------------L-----GTDRLIPLLRNFRQHLQ 343 (704)
Q Consensus 289 g~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~-~~g~~~-------------------~-----g~~~~~~l~~~L~~~l~ 343 (704)
.+++..+.. .....++++.++|+++... ..+..+ . .......+.+.|.+.++
T Consensus 101 ~~~v~~l~~---~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~ 177 (662)
T 3gyx_A 101 EDLIYDLGR---HVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAK 177 (662)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHH
Confidence 333333322 2334667888999998765 332211 0 00012247788888888
Q ss_pred HC--CCEEEeCeEEEEEEEeCC---EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH--------------------
Q 005273 344 RL--GVTIKFGTRVDDLLIENA---RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------------- 398 (704)
Q Consensus 344 ~~--Gv~i~~~t~V~~i~~~~g---~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------------- 398 (704)
+. ||+|+.++.|++|+.+++ +|.||.+.+..+ ++...+.|+.||+|||++++
T Consensus 178 ~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~---g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~~~~~~ 254 (662)
T 3gyx_A 178 NALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRA---NEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAWYPVWN 254 (662)
T ss_dssp HHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSS---SCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTTC
T ss_pred hcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCC---CcEEEEEeCEEEECCCcccccccCcCCccccccccCCCCC
Confidence 87 999999999999999877 999998754221 12457999999999998663
Q ss_pred --HHHHHHHhCCCcccccceeeEEEEecchhhhcccc---cccchhhhcccCCCCccccccceecccCCCCC--------
Q 005273 399 --DIYEMLVSHNINLVPKDFAVGLRMEHPQELINSIQ---YSELATEVQKGRGKVPVADYKVAKYVSGEDGD-------- 465 (704)
Q Consensus 399 --~~~~~l~~~gi~l~~~~~avG~~~~~p~~~~~~~~---~~~l~~e~~~g~g~~~~~d~~~~~~~~~~~~~-------- 465 (704)
+.+.|+...|..+....+ +.||+.+.+... -..+++| -.+++..++||++
T Consensus 255 tGdG~~mA~~aGA~l~~me~-----QfhPt~~~~~~~p~~~~~Lise------------~ilvn~~GeRFm~~~~p~~~~ 317 (662)
T 3gyx_A 255 AGSTYTMCAQVGAEMTMMEN-----RFVPARFKDGYGPVGAWFLLFK------------AKATNCKGEDYCATNRAMLKP 317 (662)
T ss_dssp BSHHHHHHHTTTCEEECTTC-----CBCCEEETTTCCCCHHHHHHHC------------CCEECTTSCCHHHHTGGGGHH
T ss_pred cchHHHHHHHhCCcccCCCe-----eEeccccccCCCCCCceEEEee------------eEEECCCCCEecCCcCchhhc
Confidence 334555555555544332 235544322100 0112222 1344556666666
Q ss_pred ---------CCCccccchhhhhhhhccCCceEEEcc
Q 005273 466 ---------ALSGVVTTNRSCYSFCMCPGGQIVLTS 492 (704)
Q Consensus 466 ---------e~a~Rd~~~r~v~~fc~~~gG~vv~~~ 492 (704)
||+|||+++|+++..+....|.|+++.
T Consensus 318 ~~~~~y~~~eLapRDvvsrai~~e~~~G~g~v~LD~ 353 (662)
T 3gyx_A 318 YEERGYAKGHVIPTCLRNHMMLREMREGRGPIYMDT 353 (662)
T ss_dssp HHTTTSSTTTCCCHHHHTHHHHHHHHTTCCCCEECH
T ss_pred cccccccccccCchHHHHHHHHHHHHcCCCcEEEEc
Confidence 799999999999999766555566554
No 19
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.76 E-value=4.1e-19 Score=207.73 Aligned_cols=181 Identities=19% Similarity=0.222 Sum_probs=134.7
Q ss_pred ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---C-Chh
Q 005273 44 KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---M-LPA 119 (704)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~-~p~ 119 (704)
+-..++..+.|...+.++.+++++|+++++.|++. -..|.... ....+++.++++.||+.+++||+. + +|+
T Consensus 219 ~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~---~~~~~~~~--~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~ 293 (671)
T 1ps9_A 219 DLVEDGGTFAETVELAQAIEAAGATIINTGIGWHE---ARIPTIAT--PVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQ 293 (671)
T ss_dssp CCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTT---CSSCSSST--TSCTTTTHHHHHHHTTSCSSCEEECSSCCSHH
T ss_pred ccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccc---cccccccc--cCCcchHHHHHHHHHHhcCceEEEeCCCCCHH
Confidence 43344566778889999999999999999988532 11221110 111366788999999999999963 5 599
Q ss_pred hHHHHHhcc-cc----cccccCCCeEEEEEEEeeccccccCCchhhhhhccccccccccccccccccCCceeeecccccc
Q 005273 120 EAFTVVRKS-FD----ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLEAKVGSVEHMLDKRASGDLINIIHDCKKV 194 (704)
Q Consensus 120 ~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~v~i~~~c~~~ 194 (704)
.++++++.+ +| +|+.|+||+|+.++..+..++ ++.|++|+..|...+ ..+.++. |.+|
T Consensus 294 ~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~~~------~~~c~~c~~~C~~~~-------~~~~~~~----C~~n 356 (671)
T 1ps9_A 294 VADDILSRGDADMVSMARPFLADAELLSKAQSGRADE------INTCIGCNQACLDQI-------FVGKVTS----CLVN 356 (671)
T ss_dssp HHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTCGGG------CCCCCCCCTTTHHHH-------HTTCCCC----CSSC
T ss_pred HHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCCCCC------cccccccccccchhc-------cCCCceE----EEeC
Confidence 999999877 89 999999999999998887654 567877765554321 1233443 9999
Q ss_pred cchhhhhhhhccCCCCccCC-CCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 195 SDDTLLRKEISSGSEGLYNY-PRTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
|.. ++|..+.. ++...++|+|||||+||++||..|+++|++|+|+|+.+.+|
T Consensus 357 p~~---------~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 357 PRA---------CHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp TTT---------TCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred ccc---------ccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 752 44443332 44557899999999999999999999999999999987764
No 20
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.74 E-value=7.5e-18 Score=188.90 Aligned_cols=237 Identities=17% Similarity=0.142 Sum_probs=139.0
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccc--c--ccCCcccccCcchhhhhc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFC--F--GEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~--~--g~gG~~~~sdg~l~~~~~ 296 (704)
||+|||+|++|++||+.|++.|++|+|+||. ..++.+....+.+ ...++..+... + .........+.+++..+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi-~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGV-AASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCE-ECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCe-EEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 6999999999999999999999999999998 4433211000000 00000000000 0 000000112223322221
Q ss_pred cCchhHHHHHHHHHHcCCCceee---cCCcc-----ccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEE
Q 005273 297 RNSNSVLAVMNTLVHFGAPANIL---VDGKS-----HLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGV 368 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~---~~g~~-----~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV 368 (704)
. .....++++.++|+++... ..+.. +.+......+.+.|.+.+++.|++++++++| ++..+++++.||
T Consensus 79 ~---~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv 154 (472)
T 2e5v_A 79 S---EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGF 154 (472)
T ss_dssp H---HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEE
T ss_pred H---HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEE
Confidence 1 1334567788899887641 11111 1122234568888999998889999999999 999888999999
Q ss_pred EEcCCCCCCCCceeEEecCeEEEcCCCChH-------------HHHHHHHhCCCcccccceeeEEEEecchhhhcccccc
Q 005273 369 KVSDSKDNSQSDIQKLGFDAVILAVGHSAR-------------DIYEMLVSHNINLVPKDFAVGLRMEHPQELINSIQYS 435 (704)
Q Consensus 369 ~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~-------------~~~~~l~~~gi~l~~~~~avG~~~~~p~~~~~~~~~~ 435 (704)
.+.+.+ ..+.||.||+|||+++. +...++...|..+....+ ...||..+...-. +
T Consensus 155 ~v~~~~-------g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~----~q~~p~~~~~ggg-~ 222 (472)
T 2e5v_A 155 VTEKRG-------LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEF----VQFHPTVTSLDGE-V 222 (472)
T ss_dssp EETTTE-------EECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTC----EEEEEEEECGGGC-C
T ss_pred EEEeCC-------CeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcc----eEEEeEEEccCCC-c
Confidence 886532 24779999999999874 233455555555544322 1223432221111 3
Q ss_pred cchhhhcccCCCCccccccceecccCCCC------CCCCccccchhhhhhhh
Q 005273 436 ELATEVQKGRGKVPVADYKVAKYVSGEDG------DALSGVVTTNRSCYSFC 481 (704)
Q Consensus 436 ~l~~e~~~g~g~~~~~d~~~~~~~~~~~~------~e~a~Rd~~~r~v~~fc 481 (704)
.+.++.+++.|.. +++..+++|+ .+++|||.+++.++...
T Consensus 223 ~~~ae~~~~~G~~------~v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~ 268 (472)
T 2e5v_A 223 FLLTETLRGEGAQ------IINENGERFLFNYDKRGELAPRDILSRAIYIEM 268 (472)
T ss_dssp EECCTHHHHTTCE------EEETTCCCGGGGTCTTGGGSCHHHHHHHHHHHH
T ss_pred eeeehhhcCCceE------EECCCCCCCCccCCcccCcCchhHHHHHHHHHH
Confidence 3455666666542 3344455555 37899999999998764
No 21
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=99.71 E-value=1e-16 Score=171.02 Aligned_cols=102 Identities=22% Similarity=0.170 Sum_probs=86.4
Q ss_pred CceeEccCCccChHHHHHHHHHHHHhhhhcCCCCCCCCeEEEEEEe--eecC-ceeccCCCCCccccCcCCeeEccccch
Q 005273 583 LGVKAASLHELFPTHLTDALKHSISMFDEELPGFISDTGLLHGVET--RTSC-PLQIPRNNETCESTSLKGLYPVGEGAG 659 (704)
Q Consensus 583 ~~~~~~~l~~~~p~~~~~~l~~~l~~~~~~~~G~~~~~a~~~Gve~--~~~~-p~~i~~~~~tles~~i~GLy~~GE~aG 659 (704)
..+++.+++..||..++.++. +.+||+.+++.+.+|+.. ++.+ |.++. .|||+|.++|||||||++|
T Consensus 270 ~~~y~~GfsTsLp~~~Q~~~~-------r~IpGLE~a~~~r~G~~~ey~~i~sP~~L~---~tle~k~~~~Lf~AGqi~G 339 (443)
T 3g5s_A 270 RMWSLVGFQTGLKWPEQKRLI-------QMIPGLENAEIVRYGVMHRNTYLNAPRLLG---ETLEFREAEGLYAAGVLAG 339 (443)
T ss_dssp CEEEETTCCCCBCHHHHHHHH-------TTSTTCTTCCEEECCEEEEEEEECHHHHBC---TTSEETTEEEEEECGGGGT
T ss_pred CEEeCCceecCCCHHHHHHHH-------hcCcChhhCeeeeCcEeecCceecChhHhC---hhceecCCCCEEECccccc
Confidence 457889999999999886665 566999999999666655 6766 87775 7899999999999999988
Q ss_pred hhHH---HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhh
Q 005273 660 YAGG---IVSAAADGMYAGFAVAKDFGLFPADIESILGK 695 (704)
Q Consensus 660 ~~GG---i~sA~~~G~~Aa~~i~~~~~~~~~~~~~~~g~ 695 (704)
..|+ +++++++|++||+.+..+.++.+.|. +|||.
T Consensus 340 ~~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l~r~-~yiGv 377 (443)
T 3g5s_A 340 VEGYLESAATGFLAGLNAARKALGLPPVAPPEE-SMLGG 377 (443)
T ss_dssp BCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCTT-SHHHH
T ss_pred cHHHHHHHHhHHHHHHHHHHHhcCCCCCCCChh-hhhhH
Confidence 8777 67899999999999988888999995 89997
No 22
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.70 E-value=4.5e-18 Score=200.52 Aligned_cols=193 Identities=21% Similarity=0.183 Sum_probs=132.8
Q ss_pred eeEee--ccC-CCCCC-cchhHHHHHHhhhcccccccccccceE-eecccccCCCCCCCCcccchHHHHHHHHHHcCCCC
Q 005273 39 AIRCA--KRT-GKQRY-PSEKKKLKQKHKQVLNDVNNKFEGFWR-LSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPV 113 (704)
Q Consensus 39 ~~~~~--~~~-~~~~~-~~~~~~~~~~~~~~~~d~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv 113 (704)
.+|.+ +.. .++.. ..|...+.+..++ ++|+++++.|.+. ...-..|....+ .|++.++++.||+.+++||
T Consensus 220 ~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~pv 294 (729)
T 1o94_A 220 ATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQ----QGHTIPWVKLVKQVSKKPV 294 (729)
T ss_dssp EEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCC----TTTTHHHHHHHHTTCSSCE
T ss_pred EEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccC----ccccHHHHHHHHHHCCCEE
Confidence 45543 433 23444 5688888888776 7999999998621 112123333322 4778899999999999999
Q ss_pred CC---CC-hhhHHHHHhcc-cc----cccccCCCeEEEEEEEeeccccccCCchhhhhhccccccccccccccccccCCc
Q 005273 114 AS---ML-PAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLEAKVGSVEHMLDKRASGDL 184 (704)
Q Consensus 114 ~~---~~-p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~ 184 (704)
+. +. |+.|+++++.+ +| +|+.|+||+|++|+..+..++ ++.|++|+. |.... ...+.+
T Consensus 295 i~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~~~------~~~ci~Cn~-C~~~~------~~~~~~ 361 (729)
T 1o94_A 295 LGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRYDD------IRVCIGCNV-CISRW------EIGGPP 361 (729)
T ss_dssp ECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTCGGG------CCCCCCCCH-HHHHH------HHSSSC
T ss_pred EEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcCCccc------cccccccch-hcccc------cccCCc
Confidence 74 54 99999999877 89 999999999999999887654 577777653 32210 011223
Q ss_pred eeeecccccccchhhhhhhhccCCCCccCCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 185 INIIHDCKKVSDDTLLRKEISSGSEGLYNYPRTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 185 v~i~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
+ .|.+||... .+...++......++...++|+|||||||||+||+.|+++|++|+|+|+.+.+|+
T Consensus 362 ~----~C~~n~~~g---~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 362 M----ICTQNATAG---EEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp C----CCSSCTTTT---THHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred e----eeccCcccc---ccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 3 499997532 1111111111112345578999999999999999999999999999999887653
No 23
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.65 E-value=1.4e-16 Score=184.96 Aligned_cols=173 Identities=20% Similarity=0.204 Sum_probs=104.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHH---H-cCCcEEEEEeCccccccccchhHHH-HHHhhcc------cccc----ccccCCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLA---E-LGADVTLIERGQAVEQRGRDIGALV-VRRMLEM------ESNF----CFGEGGA 283 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~---~-~g~~v~l~e~~~~~~~~~~~~~~~~-~~~~l~~------~~n~----~~g~gG~ 283 (704)
.+||+|||||+|||+||+.|+ + .|.+|+|+||....+.... ..+.+ ....+.. .... .......
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~-a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAV-AQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTT-TTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcce-ecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 479999999999999999999 6 8999999999875322111 00000 0000000 0000 0000000
Q ss_pred ccccCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCccccCC-----CChHHHHHHHHHHHHHC-CC-EEEeCeEEE
Q 005273 284 GTWSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGT-----DRLIPLLRNFRQHLQRL-GV-TIKFGTRVD 356 (704)
Q Consensus 284 ~~~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~-----~~~~~l~~~L~~~l~~~-Gv-~i~~~t~V~ 356 (704)
....+.+++..+.. .....++++.++|+++.....+..+... .....+.+.|.+.+++. || +|++++.|+
T Consensus 101 ~~l~d~~~v~~~~~---~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~ 177 (643)
T 1jnr_A 101 MGLAREDLVADYAR---HVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIF 177 (643)
T ss_dssp TTCCCHHHHHHHHH---HHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEE
T ss_pred cCcCcHHHHHHHHH---HHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEE
Confidence 01122233222221 1344677888999998655444322110 01123567777888887 99 999999999
Q ss_pred EEEEeCC---EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 357 DLLIENA---RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 357 ~i~~~~g---~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+|+.+++ +|.||.+.+..+ ++...+.|+.||+|||+++.
T Consensus 178 ~L~~~~~~~g~v~Gv~~~~~~~---g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 178 ELLKDNNDPNAVAGAVGFSVRE---PKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EEEECTTCTTBEEEEEEEESSS---SCEEEEECSEEEECCCCBCS
T ss_pred EEEEcCCccceeEEEEEEEecC---CcEEEEEcCEEEECCCcccc
Confidence 9998877 999998743211 12347899999999999764
No 24
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.57 E-value=6.7e-16 Score=172.09 Aligned_cols=124 Identities=19% Similarity=0.134 Sum_probs=90.6
Q ss_pred CCCCCCCChhhHHHHHhcccc-cccccCCCeEEEEEEEeeccccccCCchhhhhhcccccccccccccccccc-CCceee
Q 005273 110 QFPVASMLPAEAFTVVRKSFD-ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLEAKVGSVEHMLDKRAS-GDLINI 187 (704)
Q Consensus 110 ~ipv~~~~p~~a~~i~~~~~D-aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~-~~~v~i 187 (704)
+||+....|++...|.++.++ |-..| .+ .+++|.+|+|+||.+.+||.+|.++.. ++||+|
T Consensus 33 ~CP~~~~i~~~~~~~~~g~~~~A~~~~-------------~~----~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I 95 (456)
T 2vdc_G 33 HCPVSNNIPDWLKLTSEGRLEEAYEVS-------------QA----TNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTI 95 (456)
T ss_dssp TSTTCCCHHHHHHHHHHTCHHHHHHHH-------------HH----HCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCH
T ss_pred CCCCCCcHHHHHHHHHCCCHHHHHHHH-------------Hh----hCCCCccccccCCCCcchHHhcccCCCCCCCccH
Confidence 678877679998877777765 43332 11 146999999999977799999999877 899998
Q ss_pred ecccccccchhhhhhhhccCCCCccCCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 188 IHDCKKVSDDTLLRKEISSGSEGLYNYPRTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 188 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
...-.. + .|.....++..+........++|+||||||+||+||+.|++.|++|+|||+.+.+|
T Consensus 96 ~~le~~----~-~~~~~~~~~~~~~~~~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 96 GSVEKY----I-NDTAWDQGWVKPRTPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp HHHHHH----H-HHHHHHHTCCCCCCSCSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred HHHHHH----H-HHHHHHcCCCCCCCCcCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 862211 1 12222234433322233457899999999999999999999999999999987764
No 25
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.44 E-value=1e-12 Score=147.75 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
...+.+.|.+.++++|++|+++++|++|..++++++||++.++ +++.||.||.+++.+.
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g--------~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDG--------RRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS--------CEEECSCEEECCC---
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCC--------cEEEcCEEEECCCHHH
Confidence 3458899999999999999999999999999999999999987 4799999999988653
No 26
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.39 E-value=8e-14 Score=169.92 Aligned_cols=124 Identities=19% Similarity=0.152 Sum_probs=87.5
Q ss_pred CCCCCCCChhhHHHHHhcccc-cccccCCCeEEEEEEEeeccccccCCchhhhhhcccccccccccccccccc-CCceee
Q 005273 110 QFPVASMLPAEAFTVVRKSFD-ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLEAKVGSVEHMLDKRAS-GDLINI 187 (704)
Q Consensus 110 ~ipv~~~~p~~a~~i~~~~~D-aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~~~~~~~e~~~~~~~~-~~~v~i 187 (704)
+||+....|++...|-++.++ |-+.| .+ .+++|.+|+|+||.+++||..|.++.. ++||+|
T Consensus 90 ~CP~~~~ip~~~~~~~~g~~~~A~~~~-------------~~----~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I 152 (1025)
T 1gte_A 90 SCPTHLDIKSFITSISNKNYYGAAKMI-------------FS----DNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINI 152 (1025)
T ss_dssp TSTTCCCHHHHHHHHHTTCHHHHHHHH-------------HH----HCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCH
T ss_pred CCCCCCCHHHHHHHHHCCCHHHHHHHH-------------Hh----cCChhHhhcCCCCChhhHHhhCccCCCCCCCccH
Confidence 678887779998887777765 43332 11 246999999999988899999999764 589999
Q ss_pred ecccccccchhhhhhhhccCCCCccC--------CCCCCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcccc
Q 005273 188 IHDCKKVSDDTLLRKEISSGSEGLYN--------YPRTRKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAVE 255 (704)
Q Consensus 188 ~~~c~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~~ 255 (704)
+..- +++ .|.....++..... .+....++|+||||||||++||..|++.|+ +|+|||+.+.+|
T Consensus 153 ~~le----~~~-~d~~~~~~~~~~~~p~~~~~~~~~~~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 153 GGLQ----QFA-SEVFKAMNIPQIRNPCLPSQEKMPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 224 (1025)
T ss_dssp HHHH----HHH-HHHHHHHTCCCCCCTTSCCGGGSCGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred hHHH----HHH-HHHHHHhCCccccCccccccccCCccCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 8621 111 12111112211111 122346899999999999999999999999 799999987664
No 27
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.30 E-value=1.3e-11 Score=133.02 Aligned_cols=176 Identities=11% Similarity=0.054 Sum_probs=103.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc-c-cchh-----------HHHHHHhhccccccccccCCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR-G-RDIG-----------ALVVRRMLEMESNFCFGEGGAG 284 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~-~-~~~~-----------~~~~~~~l~~~~n~~~g~gG~~ 284 (704)
..+||+|||||++|+++|+.|+ +|++|+|+|+.+.++.. + ...+ ..+..........+.-..+...
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 86 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHP 86 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCcc
Confidence 3589999999999999999999 69999999999755421 1 1000 0000000000000000000000
Q ss_pred cc-cCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCc-------------------cccCCCChHHHHHHHHHHHHH
Q 005273 285 TW-SDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGK-------------------SHLGTDRLIPLLRNFRQHLQR 344 (704)
Q Consensus 285 ~~-sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~-------------------~~~g~~~~~~l~~~L~~~l~~ 344 (704)
.| ..+.+...............+.+...|++...+.... +..+......++..|.+.+++
T Consensus 87 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~ 166 (381)
T 3nyc_A 87 LLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRR 166 (381)
T ss_dssp SEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred cccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHHH
Confidence 11 1111111111122234445556666776655432110 011222345688999999999
Q ss_pred CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHH
Q 005273 345 LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEML 404 (704)
Q Consensus 345 ~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l 404 (704)
+|++|+++++|++|..++++ ++|++.++ ++.||.||+|+|.|+..+...+
T Consensus 167 ~Gv~i~~~~~V~~i~~~~~~-~~V~t~~g---------~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 167 NQGQVLCNHEALEIRRVDGA-WEVRCDAG---------SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp TTCEEESSCCCCEEEEETTE-EEEECSSE---------EEEESEEEECCGGGHHHHHHHH
T ss_pred CCCEEEcCCEEEEEEEeCCe-EEEEeCCC---------EEEcCEEEECCChhHHHHHHHh
Confidence 99999999999999988876 45665442 6999999999999997655443
No 28
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.29 E-value=6.4e-12 Score=134.67 Aligned_cols=182 Identities=16% Similarity=0.168 Sum_probs=104.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc--c-----------hh---HHHHHHhhccccccccccCC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR--D-----------IG---ALVVRRMLEMESNFCFGEGG 282 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~--~-----------~~---~~~~~~~l~~~~n~~~g~gG 282 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+++.++.... . .. ..+..........+.. ..+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCA-ARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHH-HHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHH-HcC
Confidence 47999999999999999999999999999999864432111 0 00 0000000000000000 000
Q ss_pred cccccCcchhhhh-ccCchhHHHHHHHHHHcCCC-ceeecCCc----------------cccCCCChHHHHHHHHHHHHH
Q 005273 283 AGTWSDGKLVTRI-GRNSNSVLAVMNTLVHFGAP-ANILVDGK----------------SHLGTDRLIPLLRNFRQHLQR 344 (704)
Q Consensus 283 ~~~~sdg~l~~~~-~~~~~~~~~~l~~l~~~G~~-~~~~~~g~----------------~~~g~~~~~~l~~~L~~~l~~ 344 (704)
......+.+.... ...........+.....|++ ...+.... +..+......+.+.|.+.+++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAES 162 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHHH
Confidence 0001111111000 00111233344555667765 43332110 111223345688999999999
Q ss_pred CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhC-CCc
Q 005273 345 LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSH-NIN 410 (704)
Q Consensus 345 ~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~-gi~ 410 (704)
.|++|+++++|+++..+++.++.|.+.+++ ..++.||.||+|+|.|+..+ +... |++
T Consensus 163 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~------~~~~~a~~VV~A~G~~s~~l---~~~~~g~~ 220 (369)
T 3dme_A 163 DGAQLVFHTPLIAGRVRPEGGFELDFGGAE------PMTLSCRVLINAAGLHAPGL---ARRIEGIP 220 (369)
T ss_dssp TTCEEECSCCEEEEEECTTSSEEEEECTTS------CEEEEEEEEEECCGGGHHHH---HHTEETSC
T ss_pred CCCEEECCCEEEEEEEcCCceEEEEECCCc------eeEEEeCEEEECCCcchHHH---HHHhcCCC
Confidence 999999999999999877654457766542 24799999999999998643 4444 554
No 29
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.24 E-value=6.9e-11 Score=125.64 Aligned_cols=146 Identities=25% Similarity=0.340 Sum_probs=99.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
.+||+|||||++|+++|+.|+++ |++|+|+|+...+++. .|..+.+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg---------------------------~~~~g~~~~~~~ 131 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG---------------------------AWLGGQLFSAMV 131 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT---------------------------TTCCBTTCCCEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc---------------------------cccCCccchhhh
Confidence 57999999999999999999997 9999999999776431 111111111110
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeC-------------
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIEN------------- 362 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~------------- 362 (704)
.. ....+++.++|+++... +..+ .......+.+.|.+.+.+ .|+++++++.|+++..++
T Consensus 132 ~~----~~~~~~L~~~Gv~~~~~--G~~~-~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~ 204 (344)
T 3jsk_A 132 MR----KPADVFLDEVGVPYEDE--GDYV-VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGE 204 (344)
T ss_dssp EE----TTTHHHHHHHTCCCEEC--SSEE-EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC------------
T ss_pred cc----hHHHHHHHHcCCccccc--CCeE-EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccc
Confidence 00 11245677888876532 2221 123345677889888888 499999999999998876
Q ss_pred ----C--EEEEEEEcC------CCCCCCCceeEEecCeEEEcCCCChH
Q 005273 363 ----A--RIVGVKVSD------SKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 363 ----g--~v~GV~~~~------~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+ +|.||.+.. +......+..+|+|+.||+|||+.+.
T Consensus 205 ~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 205 AEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp ----CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred cccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 3 888998741 11101112368999999999999874
No 30
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.24 E-value=7.6e-11 Score=122.88 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=96.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+||+|||||++|+++|+.|++. |.+|+|+|+.+.+++.... .+.....+..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~---------------------------~~~~~~~~~~ 91 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWL---------------------------GGQLFSAMIV 91 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTC---------------------------CSTTCCCEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceec---------------------------CCcchHHHHc
Confidence 46999999999999999999997 9999999999876532110 0000000000
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcC----
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSD---- 372 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~---- 372 (704)
.. ...+++.++|+++... +.... ......+...|.+.+.+ .|++++++++|+++..+++++.+|.+.+
T Consensus 92 ~~----~~~~~l~~~G~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 92 RK----PAHLFLDEIGVAYDEQ--DTYVV-VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVA 164 (284)
T ss_dssp ET----TTHHHHHHHTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHH
T ss_pred Cc----HHHHHHHHcCCCcccC--CCEEE-ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccc
Confidence 00 1234566778876542 11111 11234577788888876 6999999999999998889998988752
Q ss_pred --CCCCCCCceeEEecCeEEEcCCCChH
Q 005273 373 --SKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 373 --~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..++..++...+.||.||+|+|+.+.
T Consensus 165 ~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 165 QNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp TCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred cccCccccCceEEEECCEEEECCCCchH
Confidence 00000112357999999999998663
No 31
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.22 E-value=7.4e-11 Score=127.65 Aligned_cols=174 Identities=22% Similarity=0.245 Sum_probs=102.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc-chh-----------HHHHHHhhccccccccccCCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR-DIG-----------ALVVRRMLEMESNFCFGEGGAGTW 286 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~-~~~-----------~~~~~~~l~~~~n~~~g~gG~~~~ 286 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+....++.+. ..+ ..+..........+.-..+ ....
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-~~~~ 83 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYG-FSFK 83 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHT-CCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 47999999999999999999999999999999854322110 000 0000000000000000000 0000
Q ss_pred cCcchhhhh-ccCchhHHHHHHHHHHcCCCceeecCC-----cc--------------ccCCCChHHHHHHHHHHHHHCC
Q 005273 287 SDGKLVTRI-GRNSNSVLAVMNTLVHFGAPANILVDG-----KS--------------HLGTDRLIPLLRNFRQHLQRLG 346 (704)
Q Consensus 287 sdg~l~~~~-~~~~~~~~~~l~~l~~~G~~~~~~~~g-----~~--------------~~g~~~~~~l~~~L~~~l~~~G 346 (704)
..+.+.... ...........+.+...|.+...+... .| ..+......+.+.|.+.+++.|
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G 163 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYG 163 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHCC
Confidence 111110000 000112233445556677765543211 01 1112234568889999999999
Q ss_pred CEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHH
Q 005273 347 VTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYE 402 (704)
Q Consensus 347 v~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~ 402 (704)
++++++++|+++..+++++.+|++.++ .+.||.||+|+|.++..+..
T Consensus 164 v~i~~~~~v~~i~~~~~~v~gv~~~~g---------~i~a~~VV~A~G~~s~~l~~ 210 (382)
T 1y56_B 164 AKLLEYTEVKGFLIENNEIKGVKTNKG---------IIKTGIVVNATNAWANLINA 210 (382)
T ss_dssp CEEECSCCEEEEEESSSBEEEEEETTE---------EEECSEEEECCGGGHHHHHH
T ss_pred CEEECCceEEEEEEECCEEEEEEECCc---------EEECCEEEECcchhHHHHHH
Confidence 999999999999988888888887543 69999999999999865444
No 32
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.22 E-value=3.1e-12 Score=144.08 Aligned_cols=197 Identities=20% Similarity=0.203 Sum_probs=111.5
Q ss_pred chhhhhhccccc-cccccccccccccCCceeeecc---cccccchhhhhhh-hccCCCCccC-CCCCCCCcEEEEcCCHH
Q 005273 157 RTWDFISRLEAK-VGSVEHMLDKRASGDLINIIHD---CKKVSDDTLLRKE-ISSGSEGLYN-YPRTRKPKVAVVGGGPS 230 (704)
Q Consensus 157 ~~~~~i~~~~~~-~~~~e~~~~~~~~~~~v~i~~~---c~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~v~vvG~G~a 230 (704)
.++.+|+|+|+. ..+|+..|.+. ...+|.|... ++.. ........ +..-...++. ......+||+|||||++
T Consensus 26 ~~~~~~~rvc~~~~~l~~~~g~~~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~a 103 (497)
T 2bry_A 26 VQAQLCQDVLSSFQGLCRALGVES-GGGLSQYHKIKAQLNYW-SAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPC 103 (497)
T ss_dssp HHCCSHHHHHHHHHHHHHHHTCCT-TCHHHHHHHHHHTCCST-TTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC-CCCcEeehhhHHHHHHH-HHHHhhhhhhhhhccccccCccccCCCCEEEECccHH
Confidence 488999999985 34788888763 3445554431 1110 00000000 0000001111 12345689999999999
Q ss_pred HHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCchhHHHHHHHHH
Q 005273 231 GLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNSNSVLAVMNTLV 310 (704)
Q Consensus 231 Gl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~~~~~~~l~~l~ 310 (704)
||++|+.|++.|++|+|+|+.+.++.. .... .+ ...++.+.
T Consensus 104 Gl~aA~~La~~G~~V~liEk~~~~g~~-~~~~----------------------~~----------------~~~~~~l~ 144 (497)
T 2bry_A 104 GLRAAVELALLGARVVLVEKRIKFSRH-NVLH----------------------LW----------------PFTIHDLR 144 (497)
T ss_dssp HHHHHHHHHHTTCEEEEEESCSSCCCC-CEEE----------------------CC----------------HHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEEeccccCCC-Cccc----------------------CC----------------hhHHHHHH
Confidence 999999999999999999998766421 0000 00 00001111
Q ss_pred HcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe--CCEEEEEEEcCC-CCCCCCceeEEecC
Q 005273 311 HFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE--NARIVGVKVSDS-KDNSQSDIQKLGFD 387 (704)
Q Consensus 311 ~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~--~g~v~GV~~~~~-~~~~~~~~~~i~Ad 387 (704)
.+|+...................+.+.|.+.+++.|++++++++|+++..+ ++..+.|.+.+. ++ +..++.||
T Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g----~~~~i~ad 220 (497)
T 2bry_A 145 ALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPA----QLASYEFD 220 (497)
T ss_dssp TTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCH----HHHTCCBS
T ss_pred HcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCC----CEEEEEcC
Confidence 111100000000000001112457788888998899999999999999764 244556776432 21 11258999
Q ss_pred eEEEcCCCChH
Q 005273 388 AVILAVGHSAR 398 (704)
Q Consensus 388 ~VVlAtG~~s~ 398 (704)
.||+|+|+.+.
T Consensus 221 ~VV~A~G~~S~ 231 (497)
T 2bry_A 221 VLISAAGGKFV 231 (497)
T ss_dssp EEEECCCTTCC
T ss_pred EEEECCCCCcc
Confidence 99999999874
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.21 E-value=2e-10 Score=125.05 Aligned_cols=176 Identities=18% Similarity=0.200 Sum_probs=102.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-cC-CcEEEEEeCccccccccchh------------HHHHHHhhccccccccccCCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAE-LG-ADVTLIERGQAVEQRGRDIG------------ALVVRRMLEMESNFCFGEGGA 283 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~-~g-~~v~l~e~~~~~~~~~~~~~------------~~~~~~~l~~~~n~~~g~gG~ 283 (704)
..+||+|||||++|+++|+.|++ +| ++|+|+|++...++.+.... ..+....+.....+.-..+..
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEYD 99 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35799999999999999999999 99 99999999884432211000 000000000000000000000
Q ss_pred ccc-cCcchhhhh-ccCchhHHHHHHHHHHcCCCceeecCCc-----c-------------------ccCCCChHHHHHH
Q 005273 284 GTW-SDGKLVTRI-GRNSNSVLAVMNTLVHFGAPANILVDGK-----S-------------------HLGTDRLIPLLRN 337 (704)
Q Consensus 284 ~~~-sdg~l~~~~-~~~~~~~~~~l~~l~~~G~~~~~~~~g~-----~-------------------~~g~~~~~~l~~~ 337 (704)
..| ..+.+.... ...........+++...|.+...+.... | ..+......+++.
T Consensus 100 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (405)
T 2gag_B 100 FLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAWA 179 (405)
T ss_dssp CCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHHH
T ss_pred cCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHHH
Confidence 001 111111000 0001122334445556666554332110 1 1122234468889
Q ss_pred HHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHH
Q 005273 338 FRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYE 402 (704)
Q Consensus 338 L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~ 402 (704)
|.+.+++.|++++++++|+++..+++++++|.+.++ ++.||.||+|+|.++..+..
T Consensus 180 l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g---------~~~a~~vV~a~G~~s~~l~~ 235 (405)
T 2gag_B 180 FARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG---------TIHAGKVALAGAGHSSVLAE 235 (405)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC---------CEEEEEEEECCGGGHHHHHH
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc---------eEECCEEEECCchhHHHHHH
Confidence 999999999999999999999988888888887654 48999999999999865433
No 34
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.19 E-value=1.6e-10 Score=127.63 Aligned_cols=62 Identities=29% Similarity=0.362 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCe---EEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGT---RVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDI 400 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t---~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~ 400 (704)
...++..|.+.++++|++|++++ +|++|..+++++.||++.++ .++.||.||+|+|+|+..+
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G--------~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADG--------KIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTT--------EEEECSEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCC--------CEEECCEEEECCCCChhhh
Confidence 45688999999999999999999 99999999999999998875 4799999999999998643
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.19 E-value=1.6e-10 Score=125.79 Aligned_cols=167 Identities=23% Similarity=0.278 Sum_probs=97.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc--ccccchh-------------HHHH------HHhhc-ccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE--QRGRDIG-------------ALVV------RRMLE-MESNF 276 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~--~~~~~~~-------------~~~~------~~~l~-~~~n~ 276 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+....+ +.+.... .... ..+.. ....+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERRL 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCccH
Confidence 3699999999999999999999999999999987654 2110000 0000 00000 00000
Q ss_pred ccccCCcccccCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCc-----cc--------------cCCCChHHHHHH
Q 005273 277 CFGEGGAGTWSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGK-----SH--------------LGTDRLIPLLRN 337 (704)
Q Consensus 277 ~~g~gG~~~~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~-----~~--------------~g~~~~~~l~~~ 337 (704)
+...|.-.+..... ...........+++...|++...+.... +. .+......++..
T Consensus 84 -~~~~g~l~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 158 (397)
T 2oln_A 84 -IHEIGSLWFGDTDV----VTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAA 158 (397)
T ss_dssp -EECCCEEEEECSSC----CBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHH
T ss_pred -HHHCCcEEEcCCCc----cchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHH
Confidence 00111000000000 0001223445555666676544321100 10 111223457888
Q ss_pred HHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHH
Q 005273 338 FRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDI 400 (704)
Q Consensus 338 L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~ 400 (704)
|.+.+++.|++++++++|++|..+++.+. |.+.++ ++.||.||+|+|.++..+
T Consensus 159 l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~-v~t~~g---------~i~a~~VV~A~G~~s~~l 211 (397)
T 2oln_A 159 LFTLAQAAGATLRAGETVTELVPDADGVS-VTTDRG---------TYRAGKVVLACGPYTNDL 211 (397)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEE-EEESSC---------EEEEEEEEECCGGGHHHH
T ss_pred HHHHHHHcCCEEECCCEEEEEEEcCCeEE-EEECCC---------EEEcCEEEEcCCcChHHH
Confidence 99999999999999999999998877643 444332 699999999999997643
No 36
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.17 E-value=9.7e-11 Score=126.49 Aligned_cols=153 Identities=18% Similarity=0.277 Sum_probs=91.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc---chhHHHHHHh-hcccc-ccccccCCcccccCcchhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR---DIGALVVRRM-LEMES-NFCFGEGGAGTWSDGKLVT 293 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~---~~~~~~~~~~-l~~~~-n~~~g~gG~~~~sdg~l~~ 293 (704)
.+||+||||||+|+++|+.|+++|++|+|+||.+.++.... .+.......+ +.... .+.....+...++...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--- 80 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE--- 80 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCC---
Confidence 37999999999999999999999999999999876653211 1110000000 00000 0000000000000000
Q ss_pred hhccCchhHHHHHHHHHHcCCCceeec-CCccccC-CCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 294 RIGRNSNSVLAVMNTLVHFGAPANILV-DGKSHLG-TDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 294 ~~~~~~~~~~~~l~~l~~~G~~~~~~~-~g~~~~g-~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
........ ......+ .-.-..+...|.+.+.+.|++++++++|+++..+++++.++...
T Consensus 81 -------------------~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~ 141 (397)
T 3oz2_A 81 -------------------KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIR 141 (397)
T ss_dssp -------------------SSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEE
T ss_pred -------------------ceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeec
Confidence 00000000 0000111 11223466788888999999999999999999999999888765
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...+ ..+++||.||.|+|.+|.
T Consensus 142 ~~~~-----~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 142 HNNE-----IVDVRAKMVIAADGFESE 163 (397)
T ss_dssp ETTE-----EEEEEEEEEEECCCTTCH
T ss_pred cccc-----ceEEEEeEEEeCCccccH
Confidence 4422 357999999999999885
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.17 E-value=3.1e-10 Score=132.68 Aligned_cols=170 Identities=19% Similarity=0.179 Sum_probs=99.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc--ccc--------------hhHHHHHHhhcccccccccc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR--GRD--------------IGALVVRRMLEMESNFCFGE 280 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~--~~~--------------~~~~~~~~~l~~~~n~~~g~ 280 (704)
...+||+|||||++|+++|+.|+++|++|+|+|+...++.. ... ...++...... ...+.-..
T Consensus 270 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 348 (676)
T 3ps9_A 270 SSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTF-ARRFYDQL 348 (676)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHH-HHHHHHHC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHH-HHHHHHHC
Confidence 34589999999999999999999999999999997655421 110 00000000000 00000000
Q ss_pred CCcccc-cCcchhhhhccCchhHHHHHHHHHHcCCCce---eecC--------------Cc--cccCCCChHHHHHHHHH
Q 005273 281 GGAGTW-SDGKLVTRIGRNSNSVLAVMNTLVHFGAPAN---ILVD--------------GK--SHLGTDRLIPLLRNFRQ 340 (704)
Q Consensus 281 gG~~~~-sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~---~~~~--------------g~--~~~g~~~~~~l~~~L~~ 340 (704)
+....+ ..+.+... ........++.+...+++.. .+.. +. +..+......++..|.+
T Consensus 349 ~~~~~~~~~g~l~~~---~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 425 (676)
T 3ps9_A 349 PVKFDHDWCGVTQLG---WDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLE 425 (676)
T ss_dssp CSCCCEECCCEEEEC---CSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred CCCcCcCcCCeeeec---CCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHH
Confidence 000001 11111110 01112223334455565533 1110 00 11122334568899999
Q ss_pred HHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 341 HLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 341 ~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.+++.|++|+++++|++|..+++++ +|.+.++ .++.||.||+|+|+++..
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G--------~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDDCW-LLNFAGD--------QQATHSVVVLANGHQISR 475 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETTEE-EEEETTS--------CEEEESEEEECCGGGGGC
T ss_pred HHHhCCCEEEeCCeeeEEEEeCCeE-EEEECCC--------CEEECCEEEECCCcchhc
Confidence 9999999999999999999988874 6666553 269999999999999864
No 38
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.15 E-value=2.1e-10 Score=121.24 Aligned_cols=146 Identities=21% Similarity=0.288 Sum_probs=96.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
.+||+|||||++|+.||+.|++. |++|+|+|+.+.+++.. |..+.+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~---------------------------~~~g~~~~~~~ 117 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS---------------------------WLGGQLFSAMV 117 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT---------------------------TCCGGGCCCEE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc---------------------------cccCcccchhh
Confidence 45999999999999999999998 99999999988765321 11111111000
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEe---C-C--EEEEEE
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIE---N-A--RIVGVK 369 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~---~-g--~v~GV~ 369 (704)
.. .....++.++|+++... +..+. ......+...|.+.+.+. |++++.+++|+++..+ + + +|.||.
T Consensus 118 ~~----~~~~~~L~~~Gv~~~~~--g~~~~-~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVv 190 (326)
T 2gjc_A 118 MR----KPAHLFLQELEIPYEDE--GDYVV-VKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVV 190 (326)
T ss_dssp EE----TTTHHHHHHTTCCCEEC--SSEEE-ESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEE
T ss_pred hh----hHHHHHHHhhCcccccC--CCeEE-EcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEE
Confidence 00 11234667788877643 22222 223456788888888885 9999999999999987 3 5 899998
Q ss_pred EcC------CCCCCCCceeEEec---------------CeEEEcCCCChH
Q 005273 370 VSD------SKDNSQSDIQKLGF---------------DAVILAVGHSAR 398 (704)
Q Consensus 370 ~~~------~~~~~~~~~~~i~A---------------d~VVlAtG~~s~ 398 (704)
+.. +......+...+.| +.||+|||+.+.
T Consensus 191 v~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 191 TNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGP 240 (326)
T ss_dssp EEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--
T ss_pred ecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCch
Confidence 741 10001112357999 999999998764
No 39
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.14 E-value=1.7e-10 Score=124.23 Aligned_cols=168 Identities=15% Similarity=0.203 Sum_probs=97.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccc----------hh--H---HHHHHhhccccccccccCCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRD----------IG--A---LVVRRMLEMESNFCFGEGGA 283 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~----------~~--~---~~~~~~l~~~~n~~~g~gG~ 283 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+....++.+.. .+ . .+....+.....+. ..+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~--~~~~ 79 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELS--RHNE 79 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH--TTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHH--HhCC
Confidence 368999999999999999999999999999998765321110 00 0 00000000000000 0000
Q ss_pred --ccc-cCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCc-----c--------------ccCCCChHHHHHHHHHH
Q 005273 284 --GTW-SDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGK-----S--------------HLGTDRLIPLLRNFRQH 341 (704)
Q Consensus 284 --~~~-sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~-----~--------------~~g~~~~~~l~~~L~~~ 341 (704)
..+ ..+.+.. ............+.+...|.+...+.... | ..+.-....+++.|.+.
T Consensus 80 ~~~~~~~~g~l~~-~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 158 (372)
T 2uzz_A 80 DDPIFVRSGVINL-GPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQL 158 (372)
T ss_dssp SSCSEECCCEEEE-EETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHH
T ss_pred CccceeeeceEEE-eCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHH
Confidence 001 1111100 00111123344455566676654432110 1 11112234688899999
Q ss_pred HHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 342 LQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 342 l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+++.|++++++++|+++..+++.+ .|.+.++ .+.||.||+|+|.|+..
T Consensus 159 ~~~~G~~i~~~~~V~~i~~~~~~~-~v~~~~g---------~~~a~~vV~a~G~~s~~ 206 (372)
T 2uzz_A 159 AKEAGCAQLFNCPVTAIRHDDDGV-TIETADG---------EYQAKKAIVCAGTWVKD 206 (372)
T ss_dssp HHHTTCEEECSCCEEEEEECSSSE-EEEESSC---------EEEEEEEEECCGGGGGG
T ss_pred HHHCCCEEEcCCEEEEEEEcCCEE-EEEECCC---------eEEcCEEEEcCCccHHh
Confidence 999999999999999998876653 4555443 58999999999999864
No 40
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.14 E-value=3.9e-10 Score=122.33 Aligned_cols=152 Identities=19% Similarity=0.239 Sum_probs=91.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch---hHHHHHHh-hcccccc-ccccCCccccc-Ccchh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI---GALVVRRM-LEMESNF-CFGEGGAGTWS-DGKLV 292 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~---~~~~~~~~-l~~~~n~-~~g~gG~~~~s-dg~l~ 292 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.++...... .......+ +...... .....+...+. ++...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 3699999999999999999999999999999998664321110 00011110 0000000 00000000000 00000
Q ss_pred hhhccCchhHHHHHHHHHHcCCCceeecC--CccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEE
Q 005273 293 TRIGRNSNSVLAVMNTLVHFGAPANILVD--GKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKV 370 (704)
Q Consensus 293 ~~~~~~~~~~~~~l~~l~~~G~~~~~~~~--g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~ 370 (704)
...... ..+.........+.+.|.+.+++.|++++++++|+++..+++++.||.+
T Consensus 84 -----------------------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~ 140 (397)
T 3cgv_A 84 -----------------------IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKI 140 (397)
T ss_dssp -----------------------EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEE
T ss_pred -----------------------EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEE
Confidence 000000 0000011122357788999999899999999999999999999988888
Q ss_pred cCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 371 SDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 371 ~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+..+ ..++.||.||.|+|.++.
T Consensus 141 ~~~~~-----~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 141 RHNNE-----IVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EETTE-----EEEEEEEEEEECCCTTCH
T ss_pred EECCe-----EEEEEcCEEEECCCcchH
Confidence 64322 257999999999999983
No 41
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.13 E-value=4.2e-10 Score=126.76 Aligned_cols=163 Identities=22% Similarity=0.256 Sum_probs=94.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccc--hhHHHHHHhhcc-ccccccccCCcccccCcchhh
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRD--IGALVVRRMLEM-ESNFCFGEGGAGTWSDGKLVT 293 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~--~~~~~~~~~l~~-~~n~~~g~gG~~~~sdg~l~~ 293 (704)
+..+||+||||||+||++|+.|++.|++|+|+||.+.+....+. +..... .++.. +..-.+... ..+....+
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~-~~l~~lGl~~~~~~~--~~~~~~~~-- 83 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTM-EVFDQRGILPRFGEV--ETSTQGHF-- 83 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHH-HHHHTTTCGGGGCSC--CBCCEEEE--
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHH-HHHHHCCCHHHHHhc--cccccccc--
Confidence 34689999999999999999999999999999998765432221 111100 01110 000000000 00000000
Q ss_pred hhccCchhHHHHHHHHHHcCCCcee--ecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 294 RIGRNSNSVLAVMNTLVHFGAPANI--LVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 294 ~~~~~~~~~~~~l~~l~~~G~~~~~--~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
. +..... .....++...-.-..+.+.|.+.+++.|++++++++|+++..+++.+. |++.
T Consensus 84 --~----------------~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~ 144 (500)
T 2qa1_A 84 --G----------------GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVT-VEVR 144 (500)
T ss_dssp --T----------------TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEE-EEEE
T ss_pred --c----------------ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEE-EEEE
Confidence 0 000000 000001101111235778888999999999999999999998888765 6666
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCccc
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV 412 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~ 412 (704)
++.+ ..+++||.||.|+|.+|.. .+..|++..
T Consensus 145 ~~~g-----~~~~~a~~vVgADG~~S~V----R~~lg~~~~ 176 (500)
T 2qa1_A 145 GPEG-----KHTLRAAYLVGCDGGRSSV----RKAAGFDFP 176 (500)
T ss_dssp ETTE-----EEEEEESEEEECCCTTCHH----HHHTTCCCC
T ss_pred cCCC-----CEEEEeCEEEECCCcchHH----HHHcCCCcC
Confidence 5422 2479999999999999852 234565543
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.12 E-value=4e-10 Score=121.96 Aligned_cols=169 Identities=20% Similarity=0.209 Sum_probs=97.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc--ccccch--------------hHHHHHHhhccccccccccCC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE--QRGRDI--------------GALVVRRMLEMESNFCFGEGG 282 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~--~~~~~~--------------~~~~~~~~l~~~~n~~~g~gG 282 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+....+ +.+... ..+.. ........+.-. .+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~l~~~-~~ 80 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLAL-RSQELWYELEKE-TH 80 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHH-HHHHHHHHHHHH-CS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHH-HHHHHHHHHHHH-hC
Confidence 4699999999999999999999999999999987654 221100 00000 000000000000 00
Q ss_pred ccccc-CcchhhhhccCchhHHHHHHHHHHcCCCceeecCCc-----cc--------------cCCCChHHHHHHHHHHH
Q 005273 283 AGTWS-DGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGK-----SH--------------LGTDRLIPLLRNFRQHL 342 (704)
Q Consensus 283 ~~~~s-dg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~-----~~--------------~g~~~~~~l~~~L~~~l 342 (704)
...+. .+.+...............+.+...|++...+.... |. .+......++..|.+.+
T Consensus 81 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (389)
T 2gf3_A 81 HKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELA 160 (389)
T ss_dssp SCCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred CcceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHH
Confidence 00010 011100000011223444556666777654432111 10 11112356889999999
Q ss_pred HHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 343 QRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 343 ~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
++.|++++++++|+++..+++.+ .|.+.+ ..+.||.||+|+|.++..
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~-~v~~~~---------g~~~a~~vV~A~G~~~~~ 207 (389)
T 2gf3_A 161 EARGAKVLTHTRVEDFDISPDSV-KIETAN---------GSYTADKLIVSMGAWNSK 207 (389)
T ss_dssp HHTTCEEECSCCEEEEEECSSCE-EEEETT---------EEEEEEEEEECCGGGHHH
T ss_pred HHCCCEEEcCcEEEEEEecCCeE-EEEeCC---------CEEEeCEEEEecCccHHH
Confidence 99999999999999998876653 355433 268999999999999864
No 43
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.11 E-value=4.6e-10 Score=126.45 Aligned_cols=163 Identities=21% Similarity=0.240 Sum_probs=94.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch--hHHHHHHhhcc-ccccccccCCcccccCcchhh
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI--GALVVRRMLEM-ESNFCFGEGGAGTWSDGKLVT 293 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~--~~~~~~~~l~~-~~n~~~g~gG~~~~sdg~l~~ 293 (704)
+..++|+||||||+||++|+.|++.|++|+|+|+.+.....++.. ..... .++.. +..-.+... ..+....+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~-~~l~~lGl~~~~~~~--~~~~~~~~-- 84 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTM-EVFDQRGILPAFGPV--ETSTQGHF-- 84 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHH-HHHHHTTCGGGGCSC--CEESEEEE--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHH-HHHHHCCCHHHHHhc--ccccccee--
Confidence 346899999999999999999999999999999987654322211 11000 00100 000000000 00000000
Q ss_pred hhccCchhHHHHHHHHHHcCCCcee--ecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 294 RIGRNSNSVLAVMNTLVHFGAPANI--LVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 294 ~~~~~~~~~~~~l~~l~~~G~~~~~--~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
. +..... .....++...-.-..+.+.|.+.+++.|++|+++++|+++..+++.+. |++.
T Consensus 85 --~----------------~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~-v~~~ 145 (499)
T 2qa2_A 85 --G----------------GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVV-VEVE 145 (499)
T ss_dssp --T----------------TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEE-EEEE
T ss_pred --c----------------ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEE
Confidence 0 000000 000011111111235778888999999999999999999988877664 6666
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCccc
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV 412 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~ 412 (704)
++.+ ..+++||.||.|+|.+|.. .+..|++..
T Consensus 146 ~~~g-----~~~~~a~~vVgADG~~S~V----R~~lg~~~~ 177 (499)
T 2qa2_A 146 GPDG-----PRSLTTRYVVGCDGGRSTV----RKAAGFDFP 177 (499)
T ss_dssp CSSC-----EEEEEEEEEEECCCTTCHH----HHHTTCCCC
T ss_pred cCCC-----cEEEEeCEEEEccCcccHH----HHHcCCCCC
Confidence 5432 2479999999999999852 234565543
No 44
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.10 E-value=3.8e-10 Score=113.91 Aligned_cols=123 Identities=24% Similarity=0.270 Sum_probs=84.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+++|+.|++.|.+|+|+|+.....+ ..++... ..+....+...+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G---------------~~~~~~~-----~~~~~~~~~~~~~-- 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM---------------MPFLPPK-----PPFPPGSLLERAY-- 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT---------------CCSSCCC-----SCCCTTCHHHHHC--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC---------------cccCccc-----cccchhhHHhhhc--
Confidence 47999999999999999999999999999999843211 0011000 0111111111110
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
. .. +. ....+.+.|.+.+++. |++++ +++|+++..+++++++|.+.++
T Consensus 61 ----------------d----~~-----g~-~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g---- 109 (232)
T 2cul_A 61 ----------------D----PK-----DE-RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEG---- 109 (232)
T ss_dssp ----------------C----TT-----CC-CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTS----
T ss_pred ----------------c----CC-----CC-CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCC----
Confidence 0 00 11 2235778888999887 99998 5799999988888888888665
Q ss_pred CCceeEEecCeEEEcCCCChH
Q 005273 378 QSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.||.||+|+|.+++
T Consensus 110 ----~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 110 ----PPARGEKVVLAVGSFLG 126 (232)
T ss_dssp ----CCEECSEEEECCTTCSS
T ss_pred ----CEEECCEEEECCCCChh
Confidence 35899999999999864
No 45
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.10 E-value=5.9e-10 Score=125.95 Aligned_cols=146 Identities=22% Similarity=0.254 Sum_probs=91.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc-cchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG-RDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~-~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+||+|||||++|+.+|+.|++.|++|+|+|+.+...... ..+.......++... |
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~l--------g--------------- 63 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAML--------G--------------- 63 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHT--------T---------------
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHh--------C---------------
Confidence 4799999999999999999999999999999987432111 000000000000000 0
Q ss_pred CchhHHHHHHHHHHcCCCce---------------eec----CC-ccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEE
Q 005273 298 NSNSVLAVMNTLVHFGAPAN---------------ILV----DG-KSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDD 357 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~---------------~~~----~g-~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~ 357 (704)
+.+.+...+.+.. ... .. .++........+.+.|.+.+++.|++++++++|++
T Consensus 64 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~ 136 (512)
T 3e1t_A 64 -------LTDEMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVID 136 (512)
T ss_dssp -------CHHHHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEE
T ss_pred -------cHHHHHHcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 0000011111000 000 00 00111122345788899999999999999999999
Q ss_pred EEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 358 LLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 358 i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+..+++++.+|.+.+.++ +..++.||.||+|+|.++.
T Consensus 137 v~~~~~~v~gv~~~~~dG----~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 137 VLFEGERAVGVRYRNTEG----VELMAHARFIVDASGNRTR 173 (512)
T ss_dssp EEEETTEEEEEEEECSSS----CEEEEEEEEEEECCCTTCS
T ss_pred EEEECCEEEEEEEEeCCC----CEEEEEcCEEEECCCcchH
Confidence 999999999998876433 1347999999999999874
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.09 E-value=6.5e-10 Score=130.17 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=50.2
Q ss_pred ChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 330 RLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 330 ~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
....++..|.+.+++.|++|+++++|++|..+++++ .|.+.++. .++.||.||+|+|+++..
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G~-------~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQW-QLTFGQSQ-------AAKHHATVILATGHRLPE 471 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSE-EEEEC-CC-------CCEEESEEEECCGGGTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeE-EEEeCCCc-------EEEECCEEEECCCcchhc
Confidence 345688999999999999999999999999887764 56665541 158999999999999854
No 47
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.09 E-value=1.7e-09 Score=124.02 Aligned_cols=177 Identities=18% Similarity=0.247 Sum_probs=98.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc------CCcEEEEEeCccccccc---cchhHHHHHHhhccccccccccCCcccccCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL------GADVTLIERGQAVEQRG---RDIGALVVRRMLEMESNFCFGEGGAGTWSDG 289 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~------g~~v~l~e~~~~~~~~~---~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg 289 (704)
.+||+||||||+||++|+.|++. |++|+|+||++.++... ..+.......++..... .+..-.......
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~--~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKE--KGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHH--HTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHh--cCCceeeeechh
Confidence 47999999999999999999999 99999999998765421 11110001111100000 000000000000
Q ss_pred chhhhhccCchhHHHHHHHHHHcCCCceeecC--Cccc-cCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC-CEE
Q 005273 290 KLVTRIGRNSNSVLAVMNTLVHFGAPANILVD--GKSH-LGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN-ARI 365 (704)
Q Consensus 290 ~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~--g~~~-~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~-g~v 365 (704)
.+ ..+.... ...++. ... ...+ ........+.+.|.+.+++.|++|+++++|+++..++ +++
T Consensus 113 ~~-~~~~~~~-----------~~~~~~--~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V 178 (584)
T 2gmh_A 113 RF-GILTEKY-----------RIPVPI--LPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSV 178 (584)
T ss_dssp EE-EEECSSC-----------EEECCC--CTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSE
T ss_pred he-eeeccCC-----------Cccccc--cCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCE
Confidence 00 0000000 000000 000 0000 0011234578899999999999999999999998876 578
Q ss_pred EEEEEcC----CCCCCC---CceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 366 VGVKVSD----SKDNSQ---SDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 366 ~GV~~~~----~~~~~~---~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
++|.+.+ .++... ....+++||.||+|+|.++.....++..+++..
T Consensus 179 ~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~ 231 (584)
T 2gmh_A 179 KGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRA 231 (584)
T ss_dssp EEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTT
T ss_pred EEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCC
Confidence 8898864 111000 001379999999999999975556666677654
No 48
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.08 E-value=9.5e-10 Score=125.63 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=57.6
Q ss_pred ChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHH
Q 005273 330 RLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYE 402 (704)
Q Consensus 330 ~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~ 402 (704)
....+...|.+.+++.|++|+++++|+++..+++++++|++.+..+ ++...+.|+.||+|+|.|+..+..
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~t---g~~~~i~A~~VV~AaG~~s~~l~~ 237 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLT---DTTHTIYAKKVVNAAGPWVDTLRE 237 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTT---CCEEEEEEEEEEECCGGGHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCC---CceEEEECCEEEECCCcchHHHHH
Confidence 3456888899999999999999999999999999999999876321 123579999999999999875444
No 49
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.04 E-value=1e-09 Score=118.59 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHH
Q 005273 330 RLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDI 400 (704)
Q Consensus 330 ~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~ 400 (704)
....+.+.|.+.+++.|++++++++|+++..+++++ +|.+.++ .+.||.||+|+|.++..+
T Consensus 162 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~~~g---------~~~a~~vV~A~G~~s~~l 222 (382)
T 1ryi_A 162 EPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKTPSG---------DVWANHVVVASGVWSGMF 222 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEETTE---------EEEEEEEEECCGGGTHHH
T ss_pred cHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEcCCc---------eEEcCEEEECCChhHHHH
Confidence 345688999999999999999999999998877766 6666432 689999999999998643
No 50
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.03 E-value=3e-09 Score=127.16 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=102.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCccc--cccc-cchhH-----------HHHHHhhccccccccccCCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAV--EQRG-RDIGA-----------LVVRRMLEMESNFCFGEGGA 283 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~--~~~~-~~~~~-----------~~~~~~l~~~~n~~~g~gG~ 283 (704)
.+||+|||||++|+++|+.|+++|+ +|+|+|++... ++.+ ...+. .+..........+ ...+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l--~~~~~ 81 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSL--TEDGV 81 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHC--EETTE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHH--HhhCC
Confidence 4799999999999999999999998 99999998753 2211 10000 0000000000000 00000
Q ss_pred ccc-cCcchhhhh-ccCchhHHHHHHHHHHcCCCceeecCC-----cc--------------ccCCCChHHHHHHHHHHH
Q 005273 284 GTW-SDGKLVTRI-GRNSNSVLAVMNTLVHFGAPANILVDG-----KS--------------HLGTDRLIPLLRNFRQHL 342 (704)
Q Consensus 284 ~~~-sdg~l~~~~-~~~~~~~~~~l~~l~~~G~~~~~~~~g-----~~--------------~~g~~~~~~l~~~L~~~l 342 (704)
..| ..+.+.... ...........+++..+|++...+... .| ..+......++..|.+.+
T Consensus 82 ~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a 161 (830)
T 1pj5_A 82 SCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRT 161 (830)
T ss_dssp ESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHH
T ss_pred CCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHH
Confidence 011 111110000 000111223344556667665543211 01 111223456889999999
Q ss_pred HHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHH
Q 005273 343 QRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDI 400 (704)
Q Consensus 343 ~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~ 400 (704)
++.|++|+++++|++|..+++++++|.+.++ ++.||.||+|+|.|+..+
T Consensus 162 ~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G---------~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 162 ESAGVTYRGSTTVTGIEQSGGRVTGVQTADG---------VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEETTE---------EEECSEEEECCGGGHHHH
T ss_pred HHcCCEEECCceEEEEEEeCCEEEEEEECCc---------EEECCEEEECCccchHHH
Confidence 9999999999999999988888888887653 699999999999998643
No 51
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.03 E-value=2.2e-10 Score=127.02 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=52.1
Q ss_pred ChHHHHHHHHHHHHHCCCEEEeCeEEEEEEE---------------eCCEEEEEEEcCCCCCCCCceeEE--ecCeEEEc
Q 005273 330 RLIPLLRNFRQHLQRLGVTIKFGTRVDDLLI---------------ENARIVGVKVSDSKDNSQSDIQKL--GFDAVILA 392 (704)
Q Consensus 330 ~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~---------------~~g~v~GV~~~~~~~~~~~~~~~i--~Ad~VVlA 392 (704)
....++..|.+.+++.|++++++++|++|.. +++++++|.+.++ ++ .||.||+|
T Consensus 179 ~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g---------~i~~~Ad~VV~A 249 (448)
T 3axb_A 179 DAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG---------TRVEVGEKLVVA 249 (448)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS---------CEEEEEEEEEEC
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC---------EEeecCCEEEEC
Confidence 3456889999999999999999999999987 5677778887654 47 99999999
Q ss_pred CCCChHHH
Q 005273 393 VGHSARDI 400 (704)
Q Consensus 393 tG~~s~~~ 400 (704)
+|.|+..+
T Consensus 250 tG~~s~~l 257 (448)
T 3axb_A 250 AGVWSNRL 257 (448)
T ss_dssp CGGGHHHH
T ss_pred CCcCHHHH
Confidence 99998643
No 52
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.02 E-value=2.1e-09 Score=122.05 Aligned_cols=171 Identities=17% Similarity=0.172 Sum_probs=94.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccc--hhHHHHHHhhc-cccccccccCCc------c----c
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRD--IGALVVRRMLE-MESNFCFGEGGA------G----T 285 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~--~~~~~~~~~l~-~~~n~~~g~gG~------~----~ 285 (704)
.+||+||||||+||++|+.|+++|++|+||||.+......+. +..... .++. .+..-.+...+. . .
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~-~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTM-ELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHH-HHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHH-HHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 579999999999999999999999999999998765432211 111000 0000 000000000000 0 0
Q ss_pred --ccCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCccc-cCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC
Q 005273 286 --WSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSH-LGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN 362 (704)
Q Consensus 286 --~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~-~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~ 362 (704)
...+..+..+... .. .... .. ....+. .....-..+...|.+.+++.|++++++++|+++..++
T Consensus 84 ~~~~~g~~~~~~~~~---~~----~~~~-~~-----~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~ 150 (535)
T 3ihg_A 84 AESVRGEILRTVSES---FD----DMVA-AT-----EPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD 150 (535)
T ss_dssp ESSSSSCEEEEEESC---HH----HHHH-TT-----GGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC
T ss_pred EeccCCceeeecccc---cc----cccc-cc-----ccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC
Confidence 0011100000000 00 0000 00 000011 1112234577889999999999999999999999887
Q ss_pred C----EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcccc
Q 005273 363 A----RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLVP 413 (704)
Q Consensus 363 g----~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~~ 413 (704)
+ .+. +++.++++ ..+++||.||.|+|.++. ..+..|++...
T Consensus 151 ~~~~~~v~-v~~~~~~~-----~~~i~a~~vV~AdG~~S~----vR~~lgi~~~~ 195 (535)
T 3ihg_A 151 DDAGAGVT-ARLAGPDG-----EYDLRAGYLVGADGNRSL----VRESLGIGRYG 195 (535)
T ss_dssp GGGCSEEE-EEEEETTE-----EEEEEEEEEEECCCTTCH----HHHHTTCCEEE
T ss_pred CCccccEE-EEEEcCCC-----eEEEEeCEEEECCCCcch----HHHHcCCCcCC
Confidence 6 554 45554322 257999999999999984 33455666543
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.01 E-value=1.2e-09 Score=114.67 Aligned_cols=112 Identities=20% Similarity=0.207 Sum_probs=72.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||||||+||+.|+++|++|+|+|++...|.-.. ++
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~---------------~~---------------------- 48 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQ---------------NS---------------------- 48 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSS---------------CB----------------------
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeee---------------ec----------------------
Confidence 58999999999999999999999999999999754221000 00
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.+++ .........+.+.+++++.+.+...+.+..+..+...+.....|.+.++
T Consensus 49 -------------~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g----- 101 (304)
T 4fk1_A 49 -------------HGFI---------TRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH----- 101 (304)
T ss_dssp -------------CCST---------TCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTC-----
T ss_pred -------------CCcc---------CCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC-----
Confidence 0000 0000112245566667777776555555556666555444444556554
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.+|.||+|||+.+
T Consensus 102 ---~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 102 ---TKYLAERVLLATGMQE 117 (304)
T ss_dssp ---CEEEEEEEEECCCCEE
T ss_pred ---CEEEeCEEEEccCCcc
Confidence 4799999999999865
No 54
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.00 E-value=9.7e-10 Score=119.06 Aligned_cols=136 Identities=21% Similarity=0.222 Sum_probs=84.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch--hHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI--GALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~--~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.++..+..+ ...... .+..- |
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~-~l~~~--------g-------------- 67 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLR-VLEGL--------G-------------- 67 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHH-HHHHT--------T--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHH-HHHHc--------C--------------
Confidence 5799999999999999999999999999999987764322111 000000 00000 0
Q ss_pred cCchhHHHHHHHHHHcCCCce------------eecC-CccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPAN------------ILVD-GKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENA 363 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~------------~~~~-g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g 363 (704)
..+.+...+.+.. .... +.+. ....-..+.+.|.+.+.+.|++++++++|+++.. ++
T Consensus 68 --------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~ 137 (379)
T 3alj_A 68 --------ALDDVLQGSHTPPTYETWMHNKSVSKETFNGLPW-RIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG 137 (379)
T ss_dssp --------CHHHHHTTCBCCSCEEEEETTEEEEEECGGGCCE-EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT
T ss_pred --------CHHHHHhhCCCccceEEEeCCceeeeccCCCCce-EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC
Confidence 0000000000000 0000 0010 0112235788899999999999999999999976 44
Q ss_pred EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 364 RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 364 ~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.|++.++ .++.||.||+|+|.++.
T Consensus 138 ---~v~~~~g--------~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 138 ---RLTLQTG--------EVLEADLIVGADGVGSK 161 (379)
T ss_dssp ---EEEETTS--------CEEECSEEEECCCTTCH
T ss_pred ---EEEECCC--------CEEEcCEEEECCCccHH
Confidence 4666554 36999999999999985
No 55
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.00 E-value=2.7e-09 Score=117.01 Aligned_cols=58 Identities=26% Similarity=0.391 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
...+.+.|.+.++++|++|+++++|++|..+++++++|++. + .++.||.||+|+|.+.
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g--------~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-D--------RIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-T--------EEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-C--------EEEECCEEEECCCHHH
Confidence 35688999999999999999999999999999999889875 2 3799999999999875
No 56
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.99 E-value=2e-09 Score=114.41 Aligned_cols=130 Identities=20% Similarity=0.140 Sum_probs=84.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNS 299 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~ 299 (704)
+||+|||||++|+++|+.|+++|++|+|+|+.+.+++.... .. .....+ .......+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-----------~~-------~~~~~~-~~~~~~~~---- 60 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-----------AW-------HSLHLF-SPAGWSSI---- 60 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-----------SC-------TTCBCS-SCGGGSCC----
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-----------CC-------CCcEec-CchhhhhC----
Confidence 68999999999999999999999999999999876542110 00 000000 00000000
Q ss_pred hhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCC
Q 005273 300 NSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQS 379 (704)
Q Consensus 300 ~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~ 379 (704)
.+.+.. .. .........+.+.+.+.+++.|++++++++|+++..+++.+.+|.+.++
T Consensus 61 ------------~~~~~~---~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g------ 117 (357)
T 4a9w_A 61 ------------PGWPMP---AS--QGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR------ 117 (357)
T ss_dssp ------------SSSCCC---CC--SSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC------
T ss_pred ------------CCCCCC---CC--ccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC------
Confidence 000000 00 0001112457788888888999999999999999988876544554432
Q ss_pred ceeEEecCeEEEcCCCChH
Q 005273 380 DIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 380 ~~~~i~Ad~VVlAtG~~s~ 398 (704)
++.+|.||+|+|.++.
T Consensus 118 ---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 118 ---QWLARAVISATGTWGE 133 (357)
T ss_dssp ---EEEEEEEEECCCSGGG
T ss_pred ---EEEeCEEEECCCCCCC
Confidence 6899999999998763
No 57
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.99 E-value=1.7e-09 Score=118.49 Aligned_cols=143 Identities=17% Similarity=0.236 Sum_probs=85.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc-ccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR-GRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~-~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+.+..... +..+...... .+. .++
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~-~l~----------------------~~g- 60 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCME-HLD----------------------EAG- 60 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHH-HHH----------------------HTT-
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHH-HHH----------------------HcC-
Confidence 479999999999999999999999999999998643211 1000000000 000 000
Q ss_pred CchhHHHHHHHHHHcCCCce-------------eecC-----CccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEE
Q 005273 298 NSNSVLAVMNTLVHFGAPAN-------------ILVD-----GKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLL 359 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~-------------~~~~-----g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~ 359 (704)
..+.+...+.+.. .... ............+.+.|.+.+++.|++++++++|+++.
T Consensus 61 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~ 133 (421)
T 3nix_A 61 -------FLDAVKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIK 133 (421)
T ss_dssp -------CHHHHHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEE
T ss_pred -------ChHHHHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEE
Confidence 0001111111000 0000 00111112334577889999988999999999999999
Q ss_pred EeCCEE-EEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 360 IENARI-VGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 360 ~~~g~v-~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+++.+ +.+...++ +..++.||.||+|+|.++.
T Consensus 134 ~~~~~~~v~v~~~~g------~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 134 FFGTDSVTTIEDING------NKREIEARFIIDASGYGRV 167 (421)
T ss_dssp EETTEEEEEEEETTS------CEEEEEEEEEEECCGGGCH
T ss_pred EeCCEEEEEEEcCCC------CEEEEEcCEEEECCCCchh
Confidence 887654 33444443 1247999999999999873
No 58
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.97 E-value=2.5e-09 Score=122.45 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIY 401 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~ 401 (704)
...++..+.+.+++.|++|+++++|+++..+++++++|++.+..++ +...+.||.||+|+|.|+..+.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg---~~~~i~A~~VV~AaG~ws~~l~ 254 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTD---EVIEIKAKLVINTSGPWVDKVR 254 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTC---CEEEEEBSCEEECCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCC---CEEEEEcCEEEECCChhHHHHH
Confidence 3457788888899999999999999999999889999988642111 1247999999999999987543
No 59
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.96 E-value=2.8e-09 Score=116.46 Aligned_cols=154 Identities=21% Similarity=0.234 Sum_probs=83.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccch--hHHHHHHhhccc--cccc-cc--cCCccccc-C
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDI--GALVVRRMLEME--SNFC-FG--EGGAGTWS-D 288 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~--~~~~~~~~l~~~--~n~~-~g--~gG~~~~s-d 288 (704)
.+.+||+|||||++|+++|+.|+++|++|+|+|+.+.+...+..+ .......+-..+ ..+. .+ ......+. +
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 346899999999999999999999999999999987654322111 000000000000 0000 00 00000000 0
Q ss_pred -cchhhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEE
Q 005273 289 -GKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVG 367 (704)
Q Consensus 289 -g~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~G 367 (704)
+.....+.. .. .....+... ....-..+.+.|.+.+.+ ++|+++++|+++..+++.+.
T Consensus 101 ~g~~~~~~~~-----~~---~~~~~~~~~----------~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~- 159 (407)
T 3rp8_A 101 SGENMTQFSL-----AP---LIERTGSRP----------CPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVT- 159 (407)
T ss_dssp TCCEEEEEEC-----HH---HHHHHSSCC----------EEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEE-
T ss_pred CCCEeEEecc-----hh---hhhhcCCce----------EEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEE-
Confidence 111000000 00 000001000 011123467778877766 89999999999998887643
Q ss_pred EEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 368 VKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 368 V~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
|++.++ .++.||.||.|+|.++..
T Consensus 160 v~~~~g--------~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 160 VWFTDG--------SSASGDLLIAADGSHSAL 183 (407)
T ss_dssp EEETTS--------CEEEESEEEECCCTTCSS
T ss_pred EEEcCC--------CEEeeCEEEECCCcChHH
Confidence 566554 379999999999998854
No 60
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.96 E-value=1.2e-09 Score=119.17 Aligned_cols=148 Identities=18% Similarity=0.188 Sum_probs=86.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc--cchhHHHHHHhhcc-c--cccc-cc--cCCccccc-Cc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG--RDIGALVVRRMLEM-E--SNFC-FG--EGGAGTWS-DG 289 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~--~~~~~~~~~~~l~~-~--~n~~-~g--~gG~~~~s-dg 289 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.....+ ..+..... ..+.. + ..+. .+ ..+...|. ++
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~-~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGI-RVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHH-HHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHH-HHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 4699999999999999999999999999999986542111 11110000 00000 0 0000 00 00000000 00
Q ss_pred chhhhhccCchhHHHHHHHHHHcCCCceeecC--Ccccc-CCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeCCEE
Q 005273 290 KLVTRIGRNSNSVLAVMNTLVHFGAPANILVD--GKSHL-GTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIENARI 365 (704)
Q Consensus 290 ~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~--g~~~~-g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~g~v 365 (704)
..... .... ..+.. ....-..+.+.|.+.+++. |++++++++|+++..+++.+
T Consensus 85 ~~~~~-----------------------~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v 141 (399)
T 2x3n_A 85 ELLRY-----------------------FNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHA 141 (399)
T ss_dssp EEEEE-----------------------EETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSC
T ss_pred CEEEe-----------------------cchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCce
Confidence 00000 0000 00000 1122345788899999888 99999999999998877766
Q ss_pred E-EEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 366 V-GVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 366 ~-GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+ .|++.++ .++.||.||+|+|.++.
T Consensus 142 ~g~v~~~~g--------~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 142 IDQVRLNDG--------RVLRPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEETTS--------CEEEEEEEEECCCTTCH
T ss_pred EEEEEECCC--------CEEECCEEEECCCCChH
Confidence 4 5666654 36899999999999986
No 61
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.96 E-value=2.9e-09 Score=118.26 Aligned_cols=150 Identities=17% Similarity=0.086 Sum_probs=89.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc----cchhHHHHHHhhcccc---ccccccCCcccccCcch
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG----RDIGALVVRRMLEMES---NFCFGEGGAGTWSDGKL 291 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~----~~~~~~~~~~~l~~~~---n~~~g~gG~~~~sdg~l 291 (704)
.+||+||||||+|+++|+.|++.|++|+|+|+.+...... ..+.......+..... .+.....+...+..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~--- 82 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSP--- 82 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECT---
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECC---
Confidence 4799999999999999999999999999999987642110 0010000000000000 00000000000000
Q ss_pred hhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 292 VTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 292 ~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
.+. ......+ ......-..+.+.|.+.+.+.|++++++++|+++..+++++++|++.
T Consensus 83 --------------------~~~-~~~~~~~--~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~ 139 (453)
T 3atr_A 83 --------------------DMQ-TVWTVNG--EGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLF 139 (453)
T ss_dssp --------------------TSS-CEEEEEE--EEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEE
T ss_pred --------------------CCc-eEEeECC--CcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEE
Confidence 000 0000000 00011223577888899988999999999999999988999888876
Q ss_pred CC-CCCCCCceeEEecCeEEEcCCCChH
Q 005273 372 DS-KDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 372 ~~-~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+. ++ +..++.||.||+|+|.++.
T Consensus 140 ~~~~G----~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 140 NRRTN----EELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp ETTTT----EEEEEECSEEEECCGGGCT
T ss_pred EcCCC----ceEEEEcCEEEECcCCchh
Confidence 42 11 1247999999999999874
No 62
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.95 E-value=1.3e-09 Score=124.91 Aligned_cols=158 Identities=24% Similarity=0.287 Sum_probs=89.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc-cchhHHHHHHhhcc-c-------cccccccCCcccccCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG-RDIGALVVRRMLEM-E-------SNFCFGEGGAGTWSDG 289 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~-~~~~~~~~~~~l~~-~-------~n~~~g~gG~~~~sdg 289 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+.+...... ..+..... ..+.. + .......+....|...
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~-~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 101 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTM-SILNRLGLQEKIDAQNYVKKPSATFLWGQD 101 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHH-HHHHHTTCHHHHHHHCCEEECEEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHH-HHHHHcCCcHHHHhcCCcccCCcEEEecCC
Confidence 4799999999999999999999999999999986543211 11100000 00000 0 0000000000001100
Q ss_pred chhhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEE
Q 005273 290 KLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVK 369 (704)
Q Consensus 290 ~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~ 369 (704)
.....+. +..+. ......++........+...|.+.+++.|++++++++|+++..+++.+++|.
T Consensus 102 ~~~~~~~---------------~~~~~-~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~ 165 (591)
T 3i3l_A 102 QAPWTFS---------------FAAPK-VAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLT 165 (591)
T ss_dssp CCCEEEE---------------CCCC---CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEE
T ss_pred Cccceee---------------ccccc-ccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEE
Confidence 0000000 00000 0000001111223345788899999999999999999999987767777888
Q ss_pred EcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 370 VSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 370 ~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+.+.. +..++.||.||.|+|.++.
T Consensus 166 ~~~~G-----~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 166 VRRGG-----ESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp EEETT-----EEEEEEESEEEECCGGGCH
T ss_pred EecCC-----ceEEEEcCEEEECCCCcch
Confidence 87321 1247999999999999885
No 63
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.95 E-value=2.7e-09 Score=121.98 Aligned_cols=164 Identities=18% Similarity=0.149 Sum_probs=91.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccc--hhHHHHHHhhcc-ccccccccCCc---cc-ccCcch
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRD--IGALVVRRMLEM-ESNFCFGEGGA---GT-WSDGKL 291 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~--~~~~~~~~~l~~-~~n~~~g~gG~---~~-~sdg~l 291 (704)
.+||+||||||+|+++|+.|++.|++|+|||+.+......+. +..... .++.. +..-.+...+. +. |....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~-~~l~~lGl~~~l~~~~~~~~~~~~~~~~- 126 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTV-ETLDLRGLLDRFLEGTQVAKGLPFAGIF- 126 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHH-HHHHTTTCHHHHTTSCCBCSBCCBTTBC-
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHH-HHHHHcCChHHHHhcCcccCCceeCCcc-
Confidence 579999999999999999999999999999998765432211 111000 01100 00000000000 00 00000
Q ss_pred hhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 292 VTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 292 ~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
.. .++........++........+.+.|.+.+++.|++|+++++|+++..+++.+. |++.
T Consensus 127 ~~-------------------~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~-v~~~ 186 (570)
T 3fmw_A 127 TQ-------------------GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVE-VTVA 186 (570)
T ss_dssp TT-------------------CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEE-EEEE
T ss_pred cc-------------------cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEE-EEEE
Confidence 00 000000000111111223345778888999889999999999999988776654 5553
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcccc
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLVP 413 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~~ 413 (704)
+.++ ..+++||.||.|+|.++. ..+..|+....
T Consensus 187 ~~~G-----~~~~~a~~vV~ADG~~S~----vR~~lGi~~~~ 219 (570)
T 3fmw_A 187 GPSG-----PYPVRARYGVGCDGGRST----VRRLAADRFPG 219 (570)
T ss_dssp ETTE-----EEEEEESEEEECSCSSCH----HHHHTTCCCCC
T ss_pred eCCC-----cEEEEeCEEEEcCCCCch----HHHHcCCCCcc
Confidence 2221 147999999999999984 23345665543
No 64
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.94 E-value=5.4e-09 Score=100.67 Aligned_cols=110 Identities=25% Similarity=0.339 Sum_probs=78.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNS 299 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~ 299 (704)
++|+|||||++|+++|..|++.|.+|+|+|+.+..-.+.. .+. .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------------~~~-------~~------------- 46 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------------RVP-------NY------------- 46 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------------CCC-------CS-------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------------hhh-------cc-------------
Confidence 5899999999999999999999999999999863210000 000 00
Q ss_pred hhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCC
Q 005273 300 NSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQS 379 (704)
Q Consensus 300 ~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~ 379 (704)
.+.+ .......+.+.+.+.+++.|++++++ +|+++..+++. +.|.+.++
T Consensus 47 ------------~~~~-----------~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~~v~~~~g------ 95 (180)
T 2ywl_A 47 ------------PGLL-----------DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-FEVETEEG------ 95 (180)
T ss_dssp ------------TTCT-----------TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-EEEECSSC------
T ss_pred ------------CCCc-----------CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-EEEEECCC------
Confidence 0000 00112357788889999999999999 99999876554 23444332
Q ss_pred ceeEEecCeEEEcCCCChH
Q 005273 380 DIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 380 ~~~~i~Ad~VVlAtG~~s~ 398 (704)
++.+|.||+|+|.++.
T Consensus 96 ---~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 96 ---VEKAERLLLCTHKDPT 111 (180)
T ss_dssp ---EEEEEEEEECCTTCCH
T ss_pred ---EEEECEEEECCCCCCC
Confidence 6899999999999874
No 65
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.93 E-value=2.2e-09 Score=116.68 Aligned_cols=61 Identities=15% Similarity=0.086 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEE-cCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKV-SDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~-~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+.|.+.+.+.|++++++++|+++..+++..+.|++ .++ +..++.||.||.|+|.++.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g------~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDG------ERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETT------EEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCC------cEEEEEeCEEEECCCCCcH
Confidence 346778888888889999999999999765433334665 443 1236999999999999885
No 66
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.92 E-value=4.7e-09 Score=118.26 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYE 402 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~ 402 (704)
...++..|.+.+++.|++++++++|+++..++ ++++|.+.+..+ ++...++||.||+|+|.|+..+..
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~---G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDT---GKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTT---CCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCC---CCEEEEECCEEEECCChhHHHHHH
Confidence 45688899999999999999999999998876 577888853211 112479999999999999875443
No 67
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.91 E-value=6.3e-09 Score=113.37 Aligned_cols=130 Identities=22% Similarity=0.243 Sum_probs=80.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc-cccccc--hhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV-EQRGRD--IGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~-~~~~~~--~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
.++|+|||||++|+++|+.|++.|++|+|+|+.+.. ...+.. +....
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~------------------------------ 54 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPEL------------------------------ 54 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHH------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhH------------------------------
Confidence 579999999999999999999999999999998653 111111 11000
Q ss_pred ccCchhHHHHHHHHHHcCCCc-------e---ee-c-CCcc-----cc-CCCChHHHHHHHHHHHHHCCCEEEeCeEEEE
Q 005273 296 GRNSNSVLAVMNTLVHFGAPA-------N---IL-V-DGKS-----HL-GTDRLIPLLRNFRQHLQRLGVTIKFGTRVDD 357 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~-------~---~~-~-~g~~-----~~-g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~ 357 (704)
++.+...|+.. . .. . .+.. .. .......+.+.|.+.+ .|++++++++|++
T Consensus 55 ----------~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~ 122 (397)
T 2vou_A 55 ----------VHYLLEQGVELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVG 122 (397)
T ss_dssp ----------HHHHHHTTCCGGGTCBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEE
T ss_pred ----------HHHHHHcCCccccccccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEE
Confidence 00111111100 0 00 0 0000 00 0011123555555554 5899999999999
Q ss_pred EEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 358 LLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 358 i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..+++.+. |++.++ .++.||.||.|+|.++..
T Consensus 123 i~~~~~~v~-v~~~~g--------~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 123 LSQDSETVQ-MRFSDG--------TKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEECSSCEE-EEETTS--------CEEEESEEEECCCTTCHH
T ss_pred EEecCCEEE-EEECCC--------CEEECCEEEECCCcchhH
Confidence 988777653 666554 368999999999999864
No 68
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.91 E-value=4.5e-09 Score=110.74 Aligned_cols=116 Identities=21% Similarity=0.333 Sum_probs=81.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|++||+.|++.|++|+|+|+.+.+|+. +.. ..+... .+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~-------~~~--~~~~~~---------~~------------ 56 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQ-------LSA--LYPEKY---------IY------------ 56 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH-------HHH--HCTTSE---------EC------------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce-------ehh--cCCCce---------Ee------------
Confidence 469999999999999999999999999999999876532 100 000000 00
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
. ..+.+ ......+...+.+.+++.|++++++++|+++..+++..+.|.+.++
T Consensus 57 --------------~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g----- 108 (332)
T 3lzw_A 57 --------------D------VAGFP---KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEE----- 108 (332)
T ss_dssp --------------C------STTCS---SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSE-----
T ss_pred --------------c------cCCCC---CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCC-----
Confidence 0 00000 1122457788888888899999999999999887653345666543
Q ss_pred CceeEEecCeEEEcCCCC
Q 005273 379 SDIQKLGFDAVILAVGHS 396 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~ 396 (704)
.+.+|.||+|||..
T Consensus 109 ----~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 109 ----THYSKTVIITAGNG 122 (332)
T ss_dssp ----EEEEEEEEECCTTS
T ss_pred ----EEEeCEEEECCCCC
Confidence 48999999999984
No 69
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.90 E-value=5.4e-09 Score=111.39 Aligned_cols=149 Identities=13% Similarity=0.237 Sum_probs=85.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCccccc-Ccchhhhh
Q 005273 220 PKVAVVGGGPSGLFASLVLAE---LGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWS-DGKLVTRI 295 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~---~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~s-dg~l~~~~ 295 (704)
+||+|||||++|+++|+.|++ .|++|+||||+..+|++..... ........+..+ ...+. ...+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~-------~~~~~~~~~d~g-~~~~~~~~~~~--- 70 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTAC-------SPHNPQCTADLG-AQYITCTPHYA--- 70 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEE-------CSSCTTCEEESS-CCCEEECSSHH---
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeee-------cCCCCCceEecC-CceEEcCchHH---
Confidence 589999999999999999999 9999999999987765432100 000000011111 11110 01000
Q ss_pred ccCchhHHHHHHHHHHcCCCceeec--------CC-ccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEE
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILV--------DG-KSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIV 366 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~--------~g-~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~ 366 (704)
......++.+...|....... .. ..+........+.+.|.+.+ |++|+++++|++|..+++++.
T Consensus 71 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~~~~ 143 (342)
T 3qj4_A 71 ----KKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRDDKWE 143 (342)
T ss_dssp ----HHTHHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECSSSEE
T ss_pred ----HHHHHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcCCEEE
Confidence 012223333333343211110 00 11222333445666665544 899999999999998777653
Q ss_pred EEEEcCCCCCCCCceeEEecCeEEEcCCC
Q 005273 367 GVKVSDSKDNSQSDIQKLGFDAVILAVGH 395 (704)
Q Consensus 367 GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~ 395 (704)
|.+.++ ..+.+|.||+|+..
T Consensus 144 -v~~~~g--------~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 144 -VSKQTG--------SPEQFDLIVLTMPV 163 (342)
T ss_dssp -EEESSS--------CCEEESEEEECSCH
T ss_pred -EEECCC--------CEEEcCEEEECCCH
Confidence 666554 24789999999974
No 70
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.88 E-value=1.5e-08 Score=111.07 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
...+.+.|.+.+++.|++|+++++|++|..+++++ | ..++ .++.||.||+|+|.+.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v--V-~~~g--------~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV--Y-TRDN--------EEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE--E-ETTC--------CEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE--E-EeCC--------cEEEeCEEEECCCHHH
Confidence 45688999999999999999999999998877776 4 3333 3799999999999764
No 71
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.88 E-value=1.3e-08 Score=107.64 Aligned_cols=117 Identities=21% Similarity=0.313 Sum_probs=80.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+.+..++. +.. ..+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~-------~~~--~~~-------------------------- 49 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ-------LTA--LYP-------------------------- 49 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH-------HHH--TCT--------------------------
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe-------eec--cCC--------------------------
Confidence 479999999999999999999999999999998766421 100 000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
...++. .+.........+.+.+.+.+++.+++++++++|+++..+++. +.|.+.++
T Consensus 50 -----------------~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~~~g----- 105 (335)
T 2zbw_A 50 -----------------EKYIYD-VAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDL-FKVTTSQG----- 105 (335)
T ss_dssp -----------------TSEECC-STTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTE-EEEEETTS-----
T ss_pred -----------------Cceeec-cCCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCE-EEEEECCC-----
Confidence 000000 000001112356777888888889999999999999887663 23444443
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|..+
T Consensus 106 ---~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 106 ---NAYTAKAVIIAAGVGA 121 (335)
T ss_dssp ---CEEEEEEEEECCTTSE
T ss_pred ---CEEEeCEEEECCCCCC
Confidence 3689999999999864
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.88 E-value=9.3e-09 Score=110.26 Aligned_cols=118 Identities=18% Similarity=0.257 Sum_probs=81.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.+++.. .. ..+.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~-------~~--~~~~------------------------- 59 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL-------AA--LYPE------------------------- 59 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH-------HH--TCTT-------------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc-------cc--cCCC-------------------------
Confidence 4799999999999999999999999999999987664210 00 0000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
...+. .+.........+.+.+.+.+++.|++++++++|+.+..+++..+.|.+.++
T Consensus 60 ------------------~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g----- 115 (360)
T 3ab1_A 60 ------------------KHIYD-VAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG----- 115 (360)
T ss_dssp ------------------SEECC-STTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS-----
T ss_pred ------------------ccccc-CCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC-----
Confidence 00000 000000112357778888888889999999999999876543334555543
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|..+
T Consensus 116 ---~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 116 ---NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp ---CEEEEEEEEECCTTCS
T ss_pred ---cEEEeeEEEEccCCCc
Confidence 3689999999999854
No 73
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.87 E-value=7.1e-09 Score=109.73 Aligned_cols=38 Identities=29% Similarity=0.506 Sum_probs=35.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
+||+|||||++|+++|+.|++.|++|+|+|+.+.++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~ 40 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCccc
Confidence 68999999999999999999999999999999877654
No 74
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.86 E-value=3.5e-09 Score=118.74 Aligned_cols=87 Identities=17% Similarity=0.255 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCcee
Q 005273 303 LAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQ 382 (704)
Q Consensus 303 ~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~ 382 (704)
.+....+..+|....++.... .+.......+.+.+.+.+++.|++++++++|+++..+++++ .|.+.++ .
T Consensus 204 ~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g--------~ 273 (484)
T 3o0h_A 204 VEFANIFHGLGVKTTLLHRGD-LILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCY-NVVLTNG--------Q 273 (484)
T ss_dssp HHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSE-EEEETTS--------C
T ss_pred HHHHHHHHHcCCeEEEEECCC-ccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE-EEEECCC--------c
Confidence 345556777777555444332 22222334577888899999999999999999998876665 5666654 3
Q ss_pred EEecCeEEEcCCCChHH
Q 005273 383 KLGFDAVILAVGHSARD 399 (704)
Q Consensus 383 ~i~Ad~VVlAtG~~s~~ 399 (704)
.+.+|.||+|+|..++.
T Consensus 274 ~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 274 TICADRVMLATGRVPNT 290 (484)
T ss_dssp EEEESEEEECCCEEECC
T ss_pred EEEcCEEEEeeCCCcCC
Confidence 68999999999987653
No 75
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.85 E-value=3.5e-09 Score=115.88 Aligned_cols=62 Identities=19% Similarity=0.188 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEE---------EEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVD---------DLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIY 401 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~---------~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~ 401 (704)
...+...|.+.+++.|++++++++|+ ++..+++++ +|.+.+ ..+.||.||+|+|.++..+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~~~---------g~i~a~~VV~A~G~~s~~l~ 240 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVHET---------RQIRAGVIIVAAGAAGPALV 240 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CBCC---------EEEEEEEEEECCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEECC---------cEEECCEEEECCCccHHHHH
Confidence 45688999999999999999999999 887666655 554432 26999999999999986543
Q ss_pred H
Q 005273 402 E 402 (704)
Q Consensus 402 ~ 402 (704)
.
T Consensus 241 ~ 241 (405)
T 3c4n_A 241 E 241 (405)
T ss_dssp H
T ss_pred H
Confidence 3
No 76
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.84 E-value=1.7e-08 Score=104.42 Aligned_cols=109 Identities=20% Similarity=0.251 Sum_probs=76.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNS 299 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~ 299 (704)
+||+|||||++|+++|..|++.|++|+|+|+....+.... +.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~--------------------------~~------------ 44 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFAS--------------------------HS------------ 44 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCS--------------------------CC------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccch--------------------------hh------------
Confidence 6899999999999999999999999999999764321000 00
Q ss_pred hhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 300 NSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 300 ~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.+. +.........+...+.+.+.+. +++++. ++|+++..+++. +.|.+.++
T Consensus 45 ------------~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~~v~~~~g----- 96 (297)
T 3fbs_A 45 ------------HGF---------LGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFGE-FIVEIDGG----- 96 (297)
T ss_dssp ------------CSS---------TTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETTE-EEEEETTS-----
T ss_pred ------------cCC---------cCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCCe-EEEEECCC-----
Confidence 000 0001122345777888888877 677765 589999887765 34566554
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.+|.||+|||..+
T Consensus 97 ---~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 97 ---RRETAGRLILAMGVTD 112 (297)
T ss_dssp ---CEEEEEEEEECCCCEE
T ss_pred ---CEEEcCEEEECCCCCC
Confidence 3689999999999865
No 77
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.82 E-value=1.5e-08 Score=106.23 Aligned_cols=111 Identities=21% Similarity=0.246 Sum_probs=77.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|++||+.|++.|++|+|+|+. +|+.... .....
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~----------------------------~~~~~----- 59 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE----------------------------AGIVD----- 59 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG----------------------------CCEEC-----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc----------------------------ccccc-----
Confidence 479999999999999999999999999999998 4321100 00000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
..+.........+.+.+.+.+++.|+++++ ++|+++..+++.+ .|.+.++
T Consensus 60 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~-~v~~~~g----- 109 (323)
T 3f8d_A 60 -----------------------DYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEF-VVKTKRK----- 109 (323)
T ss_dssp -----------------------CSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CE-EEEESSS-----
T ss_pred -----------------------ccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEE-EEEECCC-----
Confidence 000000112235778888888889999999 8999998765543 3555543
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|..+
T Consensus 110 ---~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 110 ---GEFKADSVILGIGVKR 125 (323)
T ss_dssp ---CEEEEEEEEECCCCEE
T ss_pred ---CEEEcCEEEECcCCCC
Confidence 3789999999999875
No 78
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.82 E-value=9.2e-09 Score=112.58 Aligned_cols=156 Identities=20% Similarity=0.200 Sum_probs=83.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEEeCccccccccch--hHHHHHHhhcccc--ccc-cc--cCCcccc-cCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGAD-VTLIERGQAVEQRGRDI--GALVVRRMLEMES--NFC-FG--EGGAGTW-SDG 289 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~-v~l~e~~~~~~~~~~~~--~~~~~~~~l~~~~--n~~-~g--~gG~~~~-sdg 289 (704)
.+||+|||||++|+++|+.|++.|++ |+|+|+.+.++..+..+ .......+-..+. .+. .+ ......+ .++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 99999987654322111 0000000000000 000 00 0000000 000
Q ss_pred chhhhhccCchhHHHHHHHHHHcCCCceeecCCcccc-CCCChHHHHHHHHHHHHH-CC-CEEEeCeEEEEEEEeCCEEE
Q 005273 290 KLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHL-GTDRLIPLLRNFRQHLQR-LG-VTIKFGTRVDDLLIENARIV 366 (704)
Q Consensus 290 ~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~-g~~~~~~l~~~L~~~l~~-~G-v~i~~~t~V~~i~~~~g~v~ 366 (704)
......... ...+.... ....-..+.+.|.+.+.+ .| ++++++++|+++.. ++.+.
T Consensus 84 ~~~~~~~~~--------------------~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~ 142 (410)
T 3c96_A 84 ATVWSEPRG--------------------VEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV 142 (410)
T ss_dssp CEEEEEECG--------------------GGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE
T ss_pred CEEeeccCC--------------------ccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE
Confidence 000000000 00000000 011123477788888876 46 58999999999987 54443
Q ss_pred EEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 367 GVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 367 GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
|.+.+..+ ++..++.||.||.|+|.++..
T Consensus 143 -v~~~~~~~---g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 143 -LIGARDGH---GKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp -EEEEEETT---SCEEEEEESEEEECCCTTCHH
T ss_pred -EEEecCCC---CCceEEecCEEEECCCccchh
Confidence 55544100 112478999999999999864
No 79
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.80 E-value=1.7e-08 Score=106.46 Aligned_cols=114 Identities=19% Similarity=0.281 Sum_probs=76.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+||||||+|+++|+.|++.|++|+|+|+. .+|+.... . .. ...+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~-----------~-~~-------~~~~------------ 55 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW-----------S-EE-------VENF------------ 55 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG-----------C-SC-------BCCS------------
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc-----------c-cc-------cccC------------
Confidence 579999999999999999999999999999998 44321100 0 00 0000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe--CCEEEEEEEcCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE--NARIVGVKVSDSKDN 376 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~--~g~v~GV~~~~~~~~ 376 (704)
.+.+. ......+.+.+.+.+++.|+++++ ++|.++..+ ++..+.|.+.++
T Consensus 56 -------------~~~~~-----------~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g--- 107 (325)
T 2q7v_A 56 -------------PGFPE-----------PIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYN--- 107 (325)
T ss_dssp -------------TTCSS-----------CBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESS---
T ss_pred -------------CCCCC-----------CCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCC---
Confidence 00000 011234677788888899999987 588888776 432123444443
Q ss_pred CCCceeEEecCeEEEcCCCCh
Q 005273 377 SQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|||.++
T Consensus 108 -----~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 108 -----GEYRAKAVILATGADP 123 (325)
T ss_dssp -----CEEEEEEEEECCCEEE
T ss_pred -----CEEEeCEEEECcCCCc
Confidence 3689999999999865
No 80
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.79 E-value=1.2e-08 Score=107.87 Aligned_cols=119 Identities=24% Similarity=0.281 Sum_probs=78.8
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc----cccccccchhHHHHHHhhccccccccccCCcccccCcchh
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ----AVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLV 292 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~----~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~ 292 (704)
...+||+|||||++||++|+.|++.|++|+|+|+.+ .+|+. |......
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~----------------------------~~~~~~~ 71 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQ----------------------------LTTTTEI 71 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG----------------------------GGGSSEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcc----------------------------cccchhh
Confidence 346899999999999999999999999999999965 22211 0000000
Q ss_pred hhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcC
Q 005273 293 TRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSD 372 (704)
Q Consensus 293 ~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~ 372 (704)
..+ .+.+ .......+...+.+.+++.|+++++++ |+++..+++.+ .+.+..
T Consensus 72 ~~~----------------~~~~-----------~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~-~v~~~~ 122 (338)
T 3itj_A 72 ENF----------------PGFP-----------DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPF-KLWTEF 122 (338)
T ss_dssp CCS----------------TTCT-----------TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSE-EEEETT
T ss_pred ccc----------------CCCc-----------ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEE-EEEEEe
Confidence 000 0000 001123577888899999999999998 99887766544 344432
Q ss_pred CCCCCCCceeEEecCeEEEcCCCCh
Q 005273 373 SKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 373 ~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+ ...+.+|.||+|+|..+
T Consensus 123 ~~~-----~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 123 NED-----AEPVTTDAIILATGASA 142 (338)
T ss_dssp CSS-----SCCEEEEEEEECCCEEE
T ss_pred cCC-----CcEEEeCEEEECcCCCc
Confidence 111 13689999999999865
No 81
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.77 E-value=4.1e-08 Score=105.24 Aligned_cols=133 Identities=18% Similarity=0.261 Sum_probs=79.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+||+|||||++|+++|+.|++.|+ +|+|+|+.+ +|+. +.. ......+ +. ..+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~-------~~~----~~~~~~~-------~~-~~~~~---- 59 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS-------FKH----WPKSTRT-------IT-PSFTS---- 59 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH-------HHT----SCTTCBC-------SS-CCCCC----
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc-------ccc----Ccccccc-------cC-cchhc----
Confidence 3689999999999999999999999 999999987 5431 110 0000000 00 00000
Q ss_pred CchhHHHHHHHHHHcCCCcee-e-cCCcc----ccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc
Q 005273 298 NSNSVLAVMNTLVHFGAPANI-L-VDGKS----HLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS 371 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~-~-~~g~~----~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~ 371 (704)
..+|+.... . ....+ .........+...+.+.+++.|++++++++|+++..+++.+ .|.+.
T Consensus 60 ------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~ 126 (369)
T 3d1c_A 60 ------------NGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYY-TIATT 126 (369)
T ss_dssp ------------GGGTCCCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSE-EEEES
T ss_pred ------------ccCCchhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeE-EEEeC
Confidence 000100000 0 00000 00011123466777888888999999999999998765433 34444
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
++ .+.+|.||+|+|+++
T Consensus 127 ~g---------~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 127 TE---------TYHADYIFVATGDYN 143 (369)
T ss_dssp SC---------CEEEEEEEECCCSTT
T ss_pred CC---------EEEeCEEEECCCCCC
Confidence 32 488999999999976
No 82
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.76 E-value=3.8e-08 Score=102.94 Aligned_cols=112 Identities=22% Similarity=0.363 Sum_probs=76.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+||+|||||++|++||+.|++.|+ +|+|+|+.. .++... +.. .+ ..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~--------------------------~~~-~~-~~~--- 49 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQIT--------------------------GSS-EI-ENY--- 49 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGG--------------------------GCS-CB-CCS---
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccc--------------------------ccc-cc-ccC---
Confidence 589999999999999999999999 999999963 332100 000 00 000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.+.+ .......+.+.+.+.+++.|+++++ ++|+++..+++.+ .|.+.++
T Consensus 50 -------------~~~~-----------~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~-~v~~~~g----- 98 (311)
T 2q0l_A 50 -------------PGVK-----------EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHF-VILAEDG----- 98 (311)
T ss_dssp -------------TTCC-----------SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEE-EEEETTS-----
T ss_pred -------------CCCc-----------ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEE-EEEEcCC-----
Confidence 0000 0112234677788888889999998 7899998777643 3444443
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|.++
T Consensus 99 ---~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 99 ---KTFEAKSVIIATGGSP 114 (311)
T ss_dssp ---CEEEEEEEEECCCEEE
T ss_pred ---CEEECCEEEECCCCCC
Confidence 3689999999999765
No 83
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.75 E-value=3.3e-08 Score=103.52 Aligned_cols=118 Identities=22% Similarity=0.273 Sum_probs=73.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+||||||||++||+.|+++|++|+|+|+....+... + +.+... .++ .+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~---~-----G~~~~~----------------~~i----~~ 55 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAA---G-----GQLTTT----------------TII----EN 55 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCT---T-----CGGGGS----------------SEE----CC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCccc---C-----CCcCCh----------------HHh----hh
Confidence 5899999999999999999999999999999975432100 0 000000 000 00
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
. .+++. ......+...+.+.+++.++++...+ +.......+.. .+.+.+.
T Consensus 56 ~------------~g~~~-----------~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~-~~~~~~~----- 105 (314)
T 4a5l_A 56 F------------PGFPN-----------GIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQPF-KLFTEEG----- 105 (314)
T ss_dssp S------------TTCTT-----------CEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSE-EEEETTC-----
T ss_pred c------------cCCcc-----------cCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCce-EEEECCC-----
Confidence 0 01111 01123577788888889999988665 44443333322 2333332
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|||+.+
T Consensus 106 ---~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 106 ---KEVLTKSVIIATGATA 121 (314)
T ss_dssp ---CEEEEEEEEECCCEEE
T ss_pred ---eEEEEeEEEEcccccc
Confidence 4799999999999865
No 84
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.75 E-value=4.9e-08 Score=107.02 Aligned_cols=126 Identities=26% Similarity=0.354 Sum_probs=97.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------------------------------------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------------------------------------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----------------------------------------
Confidence 578999999999999999999999999999998754110
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.....+.+.+.+.+++.||++++++.|+++..+++++.+|.+.++
T Consensus 191 ------------------------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG----- 235 (415)
T 3lxd_A 191 ------------------------------VAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG----- 235 (415)
T ss_dssp ------------------------------TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSS-----
T ss_pred ------------------------------hcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCC-----
Confidence 000135677788889999999999999999888888889999876
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCccc-------------ccceeeEEEEecc
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV-------------PKDFAVGLRMEHP 425 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~-------------~~~~avG~~~~~p 425 (704)
.++.+|.||+|+|..++. .+++..++.+. +..|++|.....+
T Consensus 236 ---~~i~aD~Vv~a~G~~p~~--~l~~~~gl~~~~gi~vd~~~~t~~~~iyA~GD~a~~~ 290 (415)
T 3lxd_A 236 ---SVIPADIVIVGIGIVPCV--GALISAGASGGNGVDVDEFCRTSLTDVYAIGDCAAHA 290 (415)
T ss_dssp ---CEEECSEEEECSCCEESC--HHHHHTTCCCSSSEECCTTCBCSSTTEEECGGGEEEE
T ss_pred ---CEEEcCEEEECCCCccCh--HHHHhCCCCcCCCEEECCCCCcCCCCEEEEEeeeeec
Confidence 479999999999998864 23555554432 4466777655544
No 85
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.74 E-value=2e-08 Score=116.41 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=91.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEEeCccccccccc--hhHHHHHHhhc-cc--cccc---cccCCccccc--
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE-LGADVTLIERGQAVEQRGRD--IGALVVRRMLE-ME--SNFC---FGEGGAGTWS-- 287 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~-~g~~v~l~e~~~~~~~~~~~--~~~~~~~~~l~-~~--~n~~---~g~gG~~~~s-- 287 (704)
.+||+||||||+||++|+.|++ .|++|+|+||.+.....++. +..... .++. .+ ..+. ........|.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~-e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTM-EMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHH-HHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHH-HHHHHcCcHHHHHHhcccccceEEECCC
Confidence 5799999999999999999999 99999999998765432221 110000 0000 00 0000 0000000111
Q ss_pred ---CcchhhhhccCchhHHHHHHHHHHcCCCceeecCC--ccccCCCChHHHHHHHHHHHHHCCC--EEEeCeEEEEEEE
Q 005273 288 ---DGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDG--KSHLGTDRLIPLLRNFRQHLQRLGV--TIKFGTRVDDLLI 360 (704)
Q Consensus 288 ---dg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g--~~~~g~~~~~~l~~~L~~~l~~~Gv--~i~~~t~V~~i~~ 360 (704)
++.+... .. .+. ...+ .+......-..+.+.|.+.+++.|+ +|+++++|+++..
T Consensus 111 ~~~~g~~~~~-~~----------------~~~--~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~ 171 (639)
T 2dkh_A 111 PGQPGRIARH-GR----------------VQD--TEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKV 171 (639)
T ss_dssp TTSTTCEEEE-EE----------------EES--SCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEE
T ss_pred CCCCcceEee-cc----------------cCc--ccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEE
Confidence 0000000 00 000 0000 0000011223577889999999987 9999999999988
Q ss_pred eCC---EEEEEEEcC----CCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCccc
Q 005273 361 ENA---RIVGVKVSD----SKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV 412 (704)
Q Consensus 361 ~~g---~v~GV~~~~----~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~ 412 (704)
+++ ..+.|++.+ .++ +..+++||.||.|+|.+|.. .+..|++..
T Consensus 172 ~~~~~~~~v~v~~~~~~~~~~G----~~~~i~a~~vVgADG~~S~v----R~~lg~~~~ 222 (639)
T 2dkh_A 172 DHGAADYPVTVTLERCDAAHAG----QIETVQARYVVGCDGARSNV----RRAIGRQLV 222 (639)
T ss_dssp CTTCSSCCEEEEEEECSGGGTT----CEEEEEEEEEEECCCTTCHH----HHHTTCCCE
T ss_pred CCCCCcCCEEEEEEeccccCCC----CeEEEEeCEEEECCCcchHH----HHHhCCCCC
Confidence 652 233465553 111 13579999999999999852 234455543
No 86
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.74 E-value=2.2e-08 Score=108.68 Aligned_cols=36 Identities=31% Similarity=0.442 Sum_probs=33.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
.+|+||||||+||++|+.|+++|++|+||||.+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 589999999999999999999999999999987653
No 87
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.72 E-value=4.3e-08 Score=102.81 Aligned_cols=111 Identities=23% Similarity=0.306 Sum_probs=71.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.|||+||||||||++||+.|++.|++|+|+|++.. |+. +++..+-.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~-----------~~~~~~i~---------------------- 51 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQ-----------MANTEEVE---------------------- 51 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGG-----------GGGCSCBC----------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCe-----------eecccccC----------------------
Confidence 58999999999999999999999999999998643 221 11111000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
+.| + ........+.........+.+..+..+..+......... +...++
T Consensus 52 --------------~~p------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 100 (312)
T 4gcm_A 52 --------------NFP------G---FEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYK---VINFGN----- 100 (312)
T ss_dssp --------------CST------T---CSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSCE---EEECSS-----
T ss_pred --------------CcC------C---ccccchHHHHHHHHHHHhhccccccceeeeeeeeeecce---eeccCC-----
Confidence 000 0 001112345666667777788888877766555433332 122222
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.+|.||+|||+.+
T Consensus 101 ---~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 101 ---KELTAKAVIIATGAEY 116 (312)
T ss_dssp ---CEEEEEEEEECCCEEE
T ss_pred ---eEEEeceeEEcccCcc
Confidence 4799999999999765
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.71 E-value=6.4e-08 Score=109.88 Aligned_cols=134 Identities=19% Similarity=0.180 Sum_probs=84.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHH-HcCCcEEEEEeCccccccccchhHHHHHHhhccc--cccccccCCcccccCcchhhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLA-ELGADVTLIERGQAVEQRGRDIGALVVRRMLEME--SNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~-~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~--~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
.+||+|||||++|+.+|+.|+ +.|++|+|+|+.+.+|+. +.... -+. +++. .....++ +
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGt-------w~~~~-ypg~~~d~~---s~~~~~~-------~ 69 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGT-------WYWNR-YPGALSDTE---SHLYRFS-------F 69 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTH-------HHHCC-CTTCEEEEE---GGGSSCC-------S
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCc-------ccccC-CCCceecCC---cceeeec-------c
Confidence 469999999999999999999 999999999998877532 11000 000 0000 0000000 0
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCC--EEEeCeEEEEEEEeCC-EEEEEEEcC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGV--TIKFGTRVDDLLIENA-RIVGVKVSD 372 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv--~i~~~t~V~~i~~~~g-~v~GV~~~~ 372 (704)
. .. .....+.... ......+.+.+.+.+++.|+ +++++++|+++..+++ ..+.|.+.+
T Consensus 70 --~----~~---~~~~~~~~~~----------~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~ 130 (540)
T 3gwf_A 70 --D----RD---LLQESTWKTT----------YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH 130 (540)
T ss_dssp --C----HH---HHHHCCCSBS----------EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT
T ss_pred --c----cc---cccCCCCccc----------CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC
Confidence 0 00 0011111110 11123577888888888998 8999999999988764 345577765
Q ss_pred CCCCCCCceeEEecCeEEEcCCCCh
Q 005273 373 SKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 373 ~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
+ .++.||.||+|+|.++
T Consensus 131 G--------~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 131 G--------EVYRAKYVVNAVGLLS 147 (540)
T ss_dssp S--------CEEEEEEEEECCCSCC
T ss_pred C--------CEEEeCEEEECCcccc
Confidence 4 3689999999999754
No 89
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.71 E-value=4.9e-08 Score=108.70 Aligned_cols=56 Identities=29% Similarity=0.301 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 333 PLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 333 ~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.+.+.|.+.+++.|++|+++++|++|..++++++.|.+.+ .++.||.||+|++.+.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~---------~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRD---------SSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSS---------CEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECC---------eEEEcCEEEECCCHHH
Confidence 5788899999999999999999999988766544554422 2689999999998654
No 90
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.70 E-value=6.6e-08 Score=107.75 Aligned_cols=149 Identities=21% Similarity=0.281 Sum_probs=84.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCc---EEEEEeCccccccccchhHHHHHHhhccccccccccCC-ccccc----C
Q 005273 220 PKVAVVGGGPSGLFASLVLAE---LGAD---VTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGG-AGTWS----D 288 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~---~g~~---v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG-~~~~s----d 288 (704)
++|+|||||++|+.||..|++ .|++ |+|||+.+.+|+...... ..++. ..+... ...|. +
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~--------~~g~~-~~g~~~~~~~y~~l~~~ 73 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTW--------RTGLD-ENGEPVHSSMYRYLWSN 73 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCS--------CCSBC-TTSSBCCCCCCTTCBCS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCC--------CCCcc-ccCCCCcCccccchhhc
Confidence 689999999999999999999 9999 999999987764211000 00000 000000 00000 0
Q ss_pred -cchhhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCE--EEeCeEEEEEEEeCC-E
Q 005273 289 -GKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVT--IKFGTRVDDLLIENA-R 364 (704)
Q Consensus 289 -g~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~--i~~~t~V~~i~~~~g-~ 364 (704)
.+-...+.+. . .. ...+. ..........+.+.+.+.+++.|++ ++++++|+++..+++ .
T Consensus 74 ~~~~~~~~~~~-~-~~------~~~~~---------~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~ 136 (464)
T 2xve_A 74 GPKECLEFADY-T-FD------EHFGK---------PIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ 136 (464)
T ss_dssp SCGGGTCBTTB-C-HH------HHHSS---------CCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTT
T ss_pred CChhhcccCCC-C-CC------cccCC---------CCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC
Confidence 0000000000 0 00 00000 0001112345778888888888998 999999999987765 1
Q ss_pred EEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 365 IVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 365 v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.+.|++.+..+ ++..++.+|.||+|||+++
T Consensus 137 ~~~V~~~~~~~---g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 137 TFTVTVQDHTT---DTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp EEEEEEEETTT---TEEEEEEESEEEECCCSSS
T ss_pred cEEEEEEEcCC---CceEEEEcCEEEECCCCCC
Confidence 33466654211 1124689999999999765
No 91
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.70 E-value=5.4e-08 Score=110.81 Aligned_cols=59 Identities=10% Similarity=0.159 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 333 PLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 333 ~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+.+.|.+.+++. |+++++|+++..+++.|+ |++.+..+ ++..+++||.||.|+|.++.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~-v~~~~~~~---G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVR-ATITDLRT---GATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEE-EEEEETTT---CCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEE-EEEEECCC---CCEEEEEeCEEEECCCCCcH
Confidence 4667777877766 999999999998877665 55554211 11357999999999999985
No 92
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.70 E-value=9.8e-08 Score=105.72 Aligned_cols=157 Identities=25% Similarity=0.236 Sum_probs=84.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCccccccccchhHHHHHHhhcccccccccc---------CC--ccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGE---------GG--AGT 285 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~---------gG--~~~ 285 (704)
.++|+|||||++|+++|..|++.|+ +|+|||+.+.+|+....... .....++.... .+ ...
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~------~~~~~~ip~~~~~~~~~~~~~g~~~~~ 79 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTST------LSNKLPVPSTNPILTTEPIVGPAALPV 79 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSC------CCSCCCSSBCCTTCCCCCBCCSSSCCB
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCC------CCcccccccccccccccccccccccCC
Confidence 5799999999999999999999999 99999998776542111000 00000000000 00 000
Q ss_pred ccCcchhhhhccCchhHHHHHHHHHHc-CCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCE
Q 005273 286 WSDGKLVTRIGRNSNSVLAVMNTLVHF-GAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENAR 364 (704)
Q Consensus 286 ~sdg~l~~~~~~~~~~~~~~l~~l~~~-G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~ 364 (704)
|. ..++..+..+.. . .+..+ +.+.. ... ........+.+.+.+.+++.+..++++++|+++..+++.
T Consensus 80 ~~-~~~~~~l~~~~~--~----~~~~~~~~~~~---~~~--~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~ 147 (447)
T 2gv8_A 80 YP-SPLYRDLQTNTP--I----ELMGYCDQSFK---PQT--LQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGS 147 (447)
T ss_dssp CC-CCCCTTCBCSSC--H----HHHSCTTCCCC---TTC--CSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTE
T ss_pred cc-CchhhhhccCCC--H----HHhccCCCCCC---CCC--CCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCe
Confidence 00 000000000000 0 01111 11110 000 001122356777777777778889999999999877765
Q ss_pred EEEEEEcCCCCCCCCc-eeEEecCeEEEcCCCCh
Q 005273 365 IVGVKVSDSKDNSQSD-IQKLGFDAVILAVGHSA 397 (704)
Q Consensus 365 v~GV~~~~~~~~~~~~-~~~i~Ad~VVlAtG~~s 397 (704)
+ .|++.+..++ + ..++.+|.||+|+|+++
T Consensus 148 ~-~V~~~~~~~G---~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 148 W-VVTYKGTKAG---SPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp E-EEEEEESSTT---CCEEEEEESEEEECCCSSS
T ss_pred E-EEEEeecCCC---CeeEEEEeCEEEECCCCCC
Confidence 3 4555541111 1 13689999999999965
No 93
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.70 E-value=3e-08 Score=107.98 Aligned_cols=38 Identities=39% Similarity=0.674 Sum_probs=34.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 62 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDRE 62 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 35799999999999999999999999999999987543
No 94
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.70 E-value=3.7e-08 Score=111.07 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe-CCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE-NARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~-~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...+.+.|.+.+++.|++++++ +|+++..+ ++.+++|++.++ .++.||.||.|+|.++.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 3457888999999999999999 99999874 456677887664 36999999999999874
No 95
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.69 E-value=6.8e-08 Score=109.67 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 331 LIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...+.+.|.+.+++.|++++++ +|+++..++ +.+++|.+.++ .++.||.||+|+|.++.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCchh
Confidence 3468888999999999999999 899998754 45667877654 36999999999999874
No 96
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.68 E-value=8.1e-08 Score=100.96 Aligned_cols=111 Identities=16% Similarity=0.209 Sum_probs=75.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|++||+.|++.|++|+|+|+.. .++... .. .. ...+
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~-----------~~-~~-------~~~~------------ 63 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTA-----------EA-PL-------VENY------------ 63 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGG-----------GC-SC-------BCCB------------
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCcccc-----------cc-ch-------hhhc------------
Confidence 4799999999999999999999999999999953 332100 00 00 0000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
+ + + .......+...+.+.+++.|+++++ .+|.++..+++.+. |.+ ++
T Consensus 64 ----------------~------~--~-~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~~-~~----- 110 (319)
T 3cty_A 64 ----------------L------G--F-KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFD-IET-ND----- 110 (319)
T ss_dssp ----------------T------T--B-SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEE-EEE-SS-----
T ss_pred ----------------C------C--C-cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEE-EEE-CC-----
Confidence 0 0 0 0011234667788888889999988 78999887766443 444 22
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|.++
T Consensus 111 ---~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 111 ---DTYHAKYVIITTGTTH 126 (319)
T ss_dssp ---SEEEEEEEEECCCEEE
T ss_pred ---CEEEeCEEEECCCCCc
Confidence 2689999999999765
No 97
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.66 E-value=1.3e-07 Score=105.05 Aligned_cols=58 Identities=21% Similarity=0.189 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEe--CCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIE--NARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~--~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+.|.+.+++.|++|+++++|++|..+ ++++++|.+. + ..+.||.||+|+|.++.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g--------~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK-L--------GTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET-T--------EEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC-C--------eEEECCEEEECCCccch
Confidence 358889999999999999999999999988 8888888873 2 47899999999999863
No 98
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.66 E-value=7.8e-08 Score=109.51 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 331 LIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...+.+.|.+.+++. |++++++ +|+++..++ +.+++|.+.++ .++.||.||+|+|.++.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCchh
Confidence 345888999999998 9999999 999998754 56678887764 36999999999998874
No 99
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.66 E-value=7.1e-08 Score=109.76 Aligned_cols=135 Identities=17% Similarity=0.199 Sum_probs=84.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhh-ccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRML-EMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l-~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+||+|||||++|+.+|+.|++.|++|+|+|+.+.+|+. +..... ...+++. ...++ ...
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGt-------w~~~~ypg~~~dv~-----s~~y~-------~~f 81 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGV-------WYWNRYPGARCDVE-----SIDYS-------YSF 81 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-------HHHCCCTTCBCSSC-----TTTSS-------CCS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-------cccCCCCCceeCCC-----chhcc-------ccc
Confidence 579999999999999999999999999999998877632 110000 0000000 00000 000
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCC--EEEeCeEEEEEEEeCC-EEEEEEEcCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGV--TIKFGTRVDDLLIENA-RIVGVKVSDSK 374 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv--~i~~~t~V~~i~~~~g-~v~GV~~~~~~ 374 (704)
. .. ......... .......+.+.+.+.+++.|+ +++++++|+++..+++ ..+.|.+.++
T Consensus 82 ~----~~---~~~~~~~~~----------~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G- 143 (549)
T 4ap3_A 82 S----PE---LEQEWNWSE----------KYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG- 143 (549)
T ss_dssp C----HH---HHHHCCCSS----------SSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-
T ss_pred c----cc---cccCCCCcc----------CCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-
Confidence 0 00 001111110 011234577888888888888 8999999999987764 3455677654
Q ss_pred CCCCCceeEEecCeEEEcCCCCh
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.||.||+|+|.++
T Consensus 144 -------~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 144 -------DEVSARFLVVAAGPLS 159 (549)
T ss_dssp -------CEEEEEEEEECCCSEE
T ss_pred -------CEEEeCEEEECcCCCC
Confidence 3689999999999654
No 100
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.65 E-value=1.4e-07 Score=106.90 Aligned_cols=58 Identities=16% Similarity=0.183 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeC-CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 332 IPLLRNFRQHLQR-LGVTIKFGTRVDDLLIEN-ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 332 ~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+.|.+.+++ .|++++++ +|+++..++ +.+++|.+.++ .++.||.||.|+|.++.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 4578889999998 89999999 599998764 45667777654 25999999999999874
No 101
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.65 E-value=1.7e-07 Score=102.41 Aligned_cols=112 Identities=25% Similarity=0.378 Sum_probs=90.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~----------------------------------------- 180 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR----------------------------------------- 180 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh-----------------------------------------
Confidence 578999999999999999999999999999988653110
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.....+.+.+.+.+++.||+++++++|+++..+++++.+|.+.++
T Consensus 181 ------------------------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG----- 225 (404)
T 3fg2_P 181 ------------------------------VVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDG----- 225 (404)
T ss_dssp ------------------------------TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS-----
T ss_pred ------------------------------ccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCC-----
Confidence 000135677888889999999999999999988889999999876
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.++.+|.||+|+|..++. .+++..|+.+
T Consensus 226 ---~~i~aD~Vv~a~G~~p~~--~l~~~~gl~~ 253 (404)
T 3fg2_P 226 ---NTLPCDLVVVGVGVIPNV--EIAAAAGLPT 253 (404)
T ss_dssp ---CEEECSEEEECCCEEECC--HHHHHTTCCB
T ss_pred ---CEEEcCEEEECcCCccCH--HHHHhCCCCC
Confidence 379999999999988764 3455555543
No 102
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.65 E-value=4.1e-08 Score=109.09 Aligned_cols=153 Identities=13% Similarity=0.113 Sum_probs=84.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-----CcEEEEEeCccccccccchhHHHHHHhhccccccccccC-CcccccCcchh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG-----ADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEG-GAGTWSDGKLV 292 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g-----~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~g-G~~~~sdg~l~ 292 (704)
.+||+|||||++|+++|..|++.| ++|+|||+.+..+... ..+...+.+..... ...+..++...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~---------~~~~~~~~~~~~~~~~l~~~~~p~~~ 100 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG---------NTLVSQSELQISFLKDLVSLRNPTSP 100 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG---------GGCCSSCBCSSCTTSSSSTTTCTTCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC---------CCCCCCCcCCcchhhccccccCCCCC
Confidence 469999999999999999999999 9999999998765211 11111111110000 00000000000
Q ss_pred hhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe--CCEEE--EE
Q 005273 293 TRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE--NARIV--GV 368 (704)
Q Consensus 293 ~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~--~g~v~--GV 368 (704)
..+.+++...+...........++ ....+.+.+...+++.+++++++++|+++..+ +++.+ .|
T Consensus 101 ----------~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V 167 (463)
T 3s5w_A 101 ----------YSFVNYLHKHDRLVDFINLGTFYP---CRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRV 167 (463)
T ss_dssp ----------TSHHHHHHHTTCHHHHHHHCCSCC---BHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEE
T ss_pred ----------CChhHhhhhcCceeecccccCCCC---CHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEE
Confidence 001112222111000000000111 12246666777777779999999999999875 24544 34
Q ss_pred EEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 369 KVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 369 ~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.+.++.+ +..++.+|.||+|||+.+
T Consensus 168 ~~~~g~g----~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 168 ISRNADG----EELVRTTRALVVSPGGTP 192 (463)
T ss_dssp EEEETTS----CEEEEEESEEEECCCCEE
T ss_pred EEecCCC----ceEEEEeCEEEECCCCCC
Confidence 4444422 234799999999999854
No 103
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.64 E-value=5.9e-08 Score=102.52 Aligned_cols=113 Identities=27% Similarity=0.303 Sum_probs=74.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEe----CccccccccchhHHHHHHhhccccccccccCCcccccCcchhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIER----GQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTR 294 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~----~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~ 294 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+ ....++.. .+.. .+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~--------------------------~~~~-~~--- 57 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQL--------------------------TTTT-DV--- 57 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGG--------------------------GGCS-EE---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCcee--------------------------eecc-cc---
Confidence 46899999999999999999999999999998 22221110 0000 00
Q ss_pred hccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCC
Q 005273 295 IGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSK 374 (704)
Q Consensus 295 ~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~ 374 (704)
...+ + +........+...+.+.+++.|+++++++ |.++..+++.+ .|.+ ++
T Consensus 58 -----------------~~~~------~--~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~-~v~~-~~- 108 (333)
T 1vdc_A 58 -----------------ENFP------G--FPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPF-KLFT-DS- 108 (333)
T ss_dssp -----------------CCST------T--CTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSE-EEEC-SS-
T ss_pred -----------------ccCC------C--CccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEE-EEEE-CC-
Confidence 0000 0 00001123577788888888999999987 88887655533 2443 32
Q ss_pred CCCCCceeEEecCeEEEcCCCCh
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|.++
T Consensus 109 -------~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 109 -------KAILADAVILAIGAVA 124 (333)
T ss_dssp -------EEEEEEEEEECCCEEE
T ss_pred -------cEEEcCEEEECCCCCc
Confidence 4789999999999876
No 104
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.63 E-value=8.5e-08 Score=100.20 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=75.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNS 299 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~ 299 (704)
+||+||||||+|+++|+.|++.|++|+|+|+. .|+... .. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~-----------~~-~------------------------- 42 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQIL-----------DT-V------------------------- 42 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGG-----------GC-C-------------------------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceec-----------cc-c-------------------------
Confidence 68999999999999999999999999999753 221100 00 0
Q ss_pred hhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC--CEEEEEEEcCCCCCC
Q 005273 300 NSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN--ARIVGVKVSDSKDNS 377 (704)
Q Consensus 300 ~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~--g~v~GV~~~~~~~~~ 377 (704)
+++. ..+. .......+.+.+.+.+++.|++++++++|+.+..++ +..+.|.+.++
T Consensus 43 -------------~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g---- 99 (310)
T 1fl2_A 43 -------------DIEN---YISV---PKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG---- 99 (310)
T ss_dssp -------------EECC---BTTB---SSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS----
T ss_pred -------------cccc---ccCc---CCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC----
Confidence 0000 0000 001123466778888888999999999999986542 22344566544
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|.++
T Consensus 100 ----~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 100 ----AVLKARSIIVATGAKW 115 (310)
T ss_dssp ----CEEEEEEEEECCCEEE
T ss_pred ----CEEEeCEEEECcCCCc
Confidence 3689999999999865
No 105
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.62 E-value=1.9e-07 Score=106.12 Aligned_cols=136 Identities=21% Similarity=0.193 Sum_probs=82.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+.+|+.|++.|++|+|+|+.+.+|+. |.... -+.... -. ......+...
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~-------w~~~~-~pg~~~---------d~-~~~~~~~~f~ 77 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV-------WYWNR-YPGARC---------DI-ESIEYCYSFS 77 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-------HHHCC-CTTCBC---------SS-CTTTSSCCSC
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-------ccccC-CCceee---------cc-cccccccccC
Confidence 579999999999999999999999999999999877642 11000 000000 00 0000000000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCC--CEEEeCeEEEEEEEeCC-EEEEEEEcCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLG--VTIKFGTRVDDLLIENA-RIVGVKVSDSKD 375 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~G--v~i~~~t~V~~i~~~~g-~v~GV~~~~~~~ 375 (704)
.. ....+..+. .+. ....+.+.+...+++.+ ++++++++|+++..+++ ..+.|.+.++
T Consensus 78 ----~~---~~~~~~~~~-------~~~---~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-- 138 (542)
T 1w4x_A 78 ----EE---VLQEWNWTE-------RYA---SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-- 138 (542)
T ss_dssp ----HH---HHHHCCCCB-------SSC---BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--
T ss_pred ----hh---hhhccCccc-------ccC---CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--
Confidence 00 011111110 011 12346666776677765 67999999999988653 3445666654
Q ss_pred CCCCceeEEecCeEEEcCCCCh
Q 005273 376 NSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.||.||+|+|.++
T Consensus 139 ------~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 139 ------DRIRARYLIMASGQLS 154 (542)
T ss_dssp ------CEEEEEEEEECCCSCC
T ss_pred ------CEEEeCEEEECcCCCC
Confidence 3689999999999865
No 106
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.61 E-value=2e-07 Score=105.95 Aligned_cols=136 Identities=19% Similarity=0.245 Sum_probs=83.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+.+|+.|++.|++|+|+|+++.+|+. |..... + |.. .+..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt-------w~~~~y-P---------g~~--~d~~-------- 61 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT-------WYWNRY-P---------GCR--LDTE-------- 61 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-------HHHCCC-T---------TCB--CSSC--------
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-------cccCCC-C---------cee--ecCc--------
Confidence 579999999999999999999999999999999877542 110000 0 000 0000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCC--EEEeCeEEEEEEEeCC-EEEEEEEcCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGV--TIKFGTRVDDLLIENA-RIVGVKVSDSKD 375 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv--~i~~~t~V~~i~~~~g-~v~GV~~~~~~~ 375 (704)
.. .......-........ .. .......+...+.+.+++.|+ +++++++|+++..+++ ..+.|.+.++
T Consensus 62 --~~--~y~~~f~~~~~~~~~~-~~---~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-- 131 (545)
T 3uox_A 62 --SY--AYGYFALKGIIPEWEW-SE---NFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-- 131 (545)
T ss_dssp --HH--HHCHHHHTTSSTTCCC-SB---SSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--
T ss_pred --hh--hcccccCcccccCCCc-cc---cCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--
Confidence 00 0000000000000000 00 011234577778888888887 8999999999987653 3455777654
Q ss_pred CCCCceeEEecCeEEEcCCCCh
Q 005273 376 NSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.||.||+|+|.++
T Consensus 132 ------~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 132 ------EVVTCRFLISATGPLS 147 (545)
T ss_dssp ------EEEEEEEEEECCCSCB
T ss_pred ------CEEEeCEEEECcCCCC
Confidence 4789999999999754
No 107
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.61 E-value=1e-07 Score=99.37 Aligned_cols=113 Identities=22% Similarity=0.314 Sum_probs=75.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEE-EEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTL-IERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l-~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
..+||+|||||++||+||+.|++.|++|+| +|+. .+|+.... . .. +
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~-----------~-~~----------~---------- 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITS-----------S-SE----------I---------- 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGG-----------C-SC----------B----------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeee-----------e-ce----------e----------
Confidence 357999999999999999999999999999 9994 44321000 0 00 0
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC--CEEEEEEEcCCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN--ARIVGVKVSDSK 374 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~--g~v~GV~~~~~~ 374 (704)
. .+.+ +........+...+.+.+++.|++++++ +|.++ .++ +.+ .+.+.+.
T Consensus 50 ------------------~---~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~-~v~~~~~- 102 (315)
T 3r9u_A 50 ------------------E---NYPG--VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSF-TIKLEGG- 102 (315)
T ss_dssp ------------------C---CSTT--CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCE-EEEETTS-
T ss_pred ------------------c---cCCC--CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcE-EEEEecC-
Confidence 0 0000 0001123457788888888899999988 88888 655 433 2224433
Q ss_pred CCCCCceeEEecCeEEEcCCCCh
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
. .+.+|.||+|||..+
T Consensus 103 ------~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 103 ------K-TELAKAVIVCTGSAP 118 (315)
T ss_dssp ------C-EEEEEEEEECCCEEE
T ss_pred ------C-EEEeCEEEEeeCCCC
Confidence 1 689999999999754
No 108
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.60 E-value=5.2e-08 Score=106.74 Aligned_cols=126 Identities=27% Similarity=0.372 Sum_probs=94.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+..+ .+
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-----------~~--------------------------- 183 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR-----------VL--------------------------- 183 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH-----------HH---------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh-----------hc---------------------------
Confidence 3579999999999999999999999999999998654100 00
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
...+.+.+.+.+++.||++++++.|+++..+ +++.+|++.++
T Consensus 184 ---------------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~v~~~dg---- 225 (410)
T 3ef6_A 184 ---------------------------------GRRIGAWLRGLLTELGVQVELGTGVVGFSGE-GQLEQVMASDG---- 225 (410)
T ss_dssp ---------------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEECS-SSCCEEEETTS----
T ss_pred ---------------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEecc-CcEEEEEECCC----
Confidence 0135667778888999999999999998654 46667888775
Q ss_pred CCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc-------------cccceeeEEEEecc
Q 005273 378 QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL-------------VPKDFAVGLRMEHP 425 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l-------------~~~~~avG~~~~~p 425 (704)
.++.+|.||+|+|..++. .+++..|+.+ .+..|++|+....+
T Consensus 226 ----~~i~aD~Vv~a~G~~p~~--~l~~~~gl~~~~gi~vd~~~~t~~~~IyA~GD~a~~~ 280 (410)
T 3ef6_A 226 ----RSFVADSALICVGAEPAD--QLARQAGLACDRGVIVDHCGATLAKGVFAVGDVASWP 280 (410)
T ss_dssp ----CEEECSEEEECSCEEECC--HHHHHTTCCBSSSEECCTTSBCSSTTEEECGGGEEEE
T ss_pred ----CEEEcCEEEEeeCCeecH--HHHHhCCCccCCeEEEccCeeECCCCEEEEEcceecc
Confidence 479999999999998764 2355555443 24567777665544
No 109
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.60 E-value=5.4e-08 Score=108.47 Aligned_cols=104 Identities=25% Similarity=0.361 Sum_probs=79.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||||++|+++|..|++.|.+|+|+|+.+.+...
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 579999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc-CCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS-DSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~-~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++..+++.+ .|.+. +..+
T Consensus 208 -------------------------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~g-- 253 (464)
T 2eq6_A 208 -------------------------------GDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGL-HVRLEPAEGG-- 253 (464)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE-EEEEEETTCC--
T ss_pred -------------------------------cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEE-EEEEeecCCC--
Confidence 001355677788889999999999999998776654 35554 3101
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..++.+|.||+|+|..++.
T Consensus 254 --~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 254 --EGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp --SCEEEEESEEEECSCEEESC
T ss_pred --ceeEEEcCEEEECCCcccCC
Confidence 12478999999999987753
No 110
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.59 E-value=2.8e-07 Score=102.36 Aligned_cols=57 Identities=21% Similarity=0.246 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEE-eCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCC
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLI-ENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHS 396 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~-~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~ 396 (704)
..+.+.|.+.+++.|++++++++|++|.. ++++++||++.++ .++.||.||.|+|-+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G--------~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDG--------EIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTS--------CEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCC--------cEEECCEEEECCCcc
Confidence 35888999999999999999999999998 7789999999875 369999999999976
No 111
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.59 E-value=3.4e-08 Score=109.64 Aligned_cols=101 Identities=20% Similarity=0.221 Sum_probs=79.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+|+.+.+...
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 205 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS----------------------------------------- 205 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-----------------------------------------
Confidence 579999999999999999999999999999988653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.|++++++++|+++..+++....|.+.++
T Consensus 206 -------------------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g----- 249 (450)
T 1ges_A 206 -------------------------------FDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDG----- 249 (450)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTS-----
T ss_pred -------------------------------hhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCC-----
Confidence 00125567778888899999999999999876544345666654
Q ss_pred CceeEEecCeEEEcCCCChHH
Q 005273 379 SDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+.+|.||+|+|..++.
T Consensus 250 ---~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 250 ---RSETVDCLIWAIGREPAN 267 (450)
T ss_dssp ---CEEEESEEEECSCEEESC
T ss_pred ---cEEEcCEEEECCCCCcCC
Confidence 368999999999987753
No 112
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.58 E-value=1.1e-07 Score=100.78 Aligned_cols=113 Identities=23% Similarity=0.300 Sum_probs=74.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..+||+|||||++|+++|+.|++.|++|+|+|+.. +++.. .+.. .. .
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~--------------------------~~~~-~~-~---- 59 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGAL--------------------------MTTT-DV-E---- 59 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGG--------------------------GSCS-CB-C----
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCce--------------------------eccc-hh-h----
Confidence 35799999999999999999999999999999753 22110 0000 00 0
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEE-EEcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGV-KVSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV-~~~~~~~~ 376 (704)
..+ + +........+...+.+.+++.|+++++++ |.++.. ++. +.| .+.++
T Consensus 60 ---------------~~~------~--~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~-~~v~~~~~g--- 110 (335)
T 2a87_A 60 ---------------NYP------G--FRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGP-LKSVVTADG--- 110 (335)
T ss_dssp ---------------CST------T--CTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSS-SEEEEETTS---
T ss_pred ---------------hcC------C--CCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCc-EEEEEeCCC---
Confidence 000 0 00001123467778888888999999987 888765 332 223 44433
Q ss_pred CCCceeEEecCeEEEcCCCCh
Q 005273 377 SQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|..+
T Consensus 111 -----~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 111 -----QTHRARAVILAMGAAA 126 (335)
T ss_dssp -----CEEEEEEEEECCCEEE
T ss_pred -----CEEEeCEEEECCCCCc
Confidence 3689999999999865
No 113
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.58 E-value=1.5e-07 Score=98.73 Aligned_cols=112 Identities=22% Similarity=0.355 Sum_probs=74.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|+++|+.|++.|++|+|+|+.. +++.. ....... .+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~------------~~~~~~~-------~~------------ 52 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQL------------TTTTEVE-------NW------------ 52 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGG------------GGCSBCC-------CS------------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceE------------ecchhhh-------hC------------
Confidence 4689999999999999999999999999999753 32210 0000000 00
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.+.+ .......+...+.+.+++.|+++++++ |+.+..+++.+. + +.++
T Consensus 53 -------------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~-v-~~~~----- 100 (320)
T 1trb_A 53 -------------PGDP-----------NDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFR-L-NGDN----- 100 (320)
T ss_dssp -------------TTCC-----------SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEE-E-EESS-----
T ss_pred -------------CCCC-----------CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEE-E-EeCC-----
Confidence 0000 001123467777888888999999986 888866555432 2 3332
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|+|..+
T Consensus 101 ---~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 101 ---GEYTCDALIIATGASA 116 (320)
T ss_dssp ---CEEEEEEEEECCCEEE
T ss_pred ---CEEEcCEEEECCCCCc
Confidence 3689999999999865
No 114
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.58 E-value=1.3e-07 Score=105.38 Aligned_cols=45 Identities=40% Similarity=0.503 Sum_probs=37.7
Q ss_pred CCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc
Q 005273 215 PRTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR 259 (704)
Q Consensus 215 ~~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~ 259 (704)
|....+||+|||||++||+||+.|++.|++|+|+|+.+.+|++..
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 445568999999999999999999999999999999999988653
No 115
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.57 E-value=1.1e-07 Score=107.82 Aligned_cols=100 Identities=26% Similarity=0.262 Sum_probs=80.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+++++|||||+.|++.|..+++.|.+|+|+++...+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~----------------------------------------- 260 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG----------------------------------------- 260 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-----------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-----------------------------------------
Confidence 367899999999999999999999999999987543210
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
. -.++.+.+.+.+++.|+++++++.+..+...++.+. |.+.++
T Consensus 261 ------------------------------~--D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~-v~~~~~---- 303 (542)
T 4b1b_A 261 ------------------------------F--DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKIL-VEFSDK---- 303 (542)
T ss_dssp ------------------------------S--CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEE-EEETTS----
T ss_pred ------------------------------c--chhHHHHHHHHHHhhcceeecceEEEEEEecCCeEE-EEEcCC----
Confidence 0 014677788899999999999999999988877543 555544
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+.+|.|++|+|..++.
T Consensus 304 ----~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 304 ----TSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp ----CEEEESEEEECSCEEESC
T ss_pred ----CeEEEEEEEEcccccCCc
Confidence 357899999999998763
No 116
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.57 E-value=1.4e-07 Score=106.58 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=78.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
...+||+||||||+|++||+.|++.|++|+|+|+. .|+.... . .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~-----------~--------~--------------- 253 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLD-----------T--------V--------------- 253 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTT-----------C--------S---------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccc-----------c--------c---------------
Confidence 34689999999999999999999999999999863 2221000 0 0
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC--CEEEEEEEcCCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN--ARIVGVKVSDSK 374 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~--g~v~GV~~~~~~ 374 (704)
+++. ..+.+ ......+...+.+.+++.|++++++++|+.+..+. +..+.|.+.++
T Consensus 254 ----------------~~~~---~~~~~---~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g- 310 (521)
T 1hyu_A 254 ----------------DIEN---YISVP---KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG- 310 (521)
T ss_dssp ----------------CBCC---BTTBS---SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS-
T ss_pred ----------------cccc---cCCCC---CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC-
Confidence 0000 00000 11223467788888888999999999999986531 22344666554
Q ss_pred CCCCCceeEEecCeEEEcCCCCh
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.||+|||.++
T Consensus 311 -------~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 311 -------AVLKARSIIIATGAKW 326 (521)
T ss_dssp -------CEEEEEEEEECCCEEE
T ss_pred -------CEEEcCEEEECCCCCc
Confidence 3689999999999865
No 117
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.56 E-value=5e-07 Score=97.86 Aligned_cols=111 Identities=20% Similarity=0.249 Sum_probs=85.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++++|||+|+.|+++|..|++.|.+|+|+|+.+.+..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 578999999999999999999999999999998653110
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.....+.+.+.+.+++.|++++++++|+++..+++. ..|.+.++
T Consensus 184 ------------------------------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~g----- 227 (384)
T 2v3a_A 184 ------------------------------LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHLSDG----- 227 (384)
T ss_dssp ------------------------------TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTE-EEEEETTS-----
T ss_pred ------------------------------ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCE-EEEEECCC-----
Confidence 000135677788888899999999999999876664 35666554
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.++.+|.||+|+|.+++.. +++..++.+
T Consensus 228 ---~~i~~d~vv~a~G~~p~~~--l~~~~g~~~ 255 (384)
T 2v3a_A 228 ---EVIPCDLVVSAVGLRPRTE--LAFAAGLAV 255 (384)
T ss_dssp ---CEEEESEEEECSCEEECCH--HHHHTTCCB
T ss_pred ---CEEECCEEEECcCCCcCHH--HHHHCCCCC
Confidence 3689999999999988642 455666654
No 118
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.55 E-value=2.2e-07 Score=108.07 Aligned_cols=36 Identities=36% Similarity=0.580 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-----cCCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE-----LGADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~-----~g~~v~l~e~~~~~ 254 (704)
.+||+||||||+||++|+.|++ .|++|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 4699999999999999999999 99999999998654
No 119
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.55 E-value=1.3e-07 Score=107.14 Aligned_cols=112 Identities=16% Similarity=0.233 Sum_probs=84.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRNS 299 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~~ 299 (704)
++++|||+|..|+++|..|++.|.+|+++++.+.+...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 79999999999999999999999999999988653100
Q ss_pred hhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC-CEEE--EEEEcCCCCC
Q 005273 300 NSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN-ARIV--GVKVSDSKDN 376 (704)
Q Consensus 300 ~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~-g~v~--GV~~~~~~~~ 376 (704)
....+.+.+.+.+++.||+++++++|+++..++ +++. .|++.++
T Consensus 253 ------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G--- 299 (523)
T 1mo9_A 253 ------------------------------KDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG--- 299 (523)
T ss_dssp ------------------------------CSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE---
T ss_pred ------------------------------ccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC---
Confidence 001356778888999999999999999998653 4443 3444433
Q ss_pred CCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 377 SQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
..++.+|.||+|+|.+++... .++..|+.+
T Consensus 300 ----~~~i~aD~Vv~A~G~~p~~~~-~l~~~gl~~ 329 (523)
T 1mo9_A 300 ----EMRIETDFVFLGLGEQPRSAE-LAKILGLDL 329 (523)
T ss_dssp ----EEEEECSCEEECCCCEECCHH-HHHHHTCCB
T ss_pred ----cEEEEcCEEEECcCCccCCcc-CHHHcCCcc
Confidence 127999999999999887532 445445443
No 120
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.55 E-value=3.3e-07 Score=101.05 Aligned_cols=111 Identities=23% Similarity=0.362 Sum_probs=86.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------------------------------------
Confidence 5799999999999999999999999999999876531000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEE--eCCEEEEEEEcCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLI--ENARIVGVKVSDSKDN 376 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~--~~g~v~GV~~~~~~~~ 376 (704)
....+.+.+.+.+++.||+++++++|+++.. +++++.+|.+.++
T Consensus 189 -------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G--- 234 (431)
T 1q1r_A 189 -------------------------------TAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDG--- 234 (431)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTS---
T ss_pred -------------------------------hhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCC---
Confidence 0013556677888889999999999999986 5677778888765
Q ss_pred CCCceeEEecCeEEEcCCCChHHHHHHHHhCCCc
Q 005273 377 SQSDIQKLGFDAVILAVGHSARDIYEMLVSHNIN 410 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~ 410 (704)
..+.+|.||+|+|..++. .+++..++.
T Consensus 235 -----~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 261 (431)
T 1q1r_A 235 -----TRLPADLVIAGIGLIPNC--ELASAAGLQ 261 (431)
T ss_dssp -----CEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred -----CEEEcCEEEECCCCCcCc--chhhccCCC
Confidence 368999999999987753 244555544
No 121
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.55 E-value=9.9e-08 Score=108.92 Aligned_cols=109 Identities=21% Similarity=0.236 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHcCCCceeecCCcc------ccC-----CCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe----CCEE
Q 005273 301 SVLAVMNTLVHFGAPANILVDGKS------HLG-----TDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE----NARI 365 (704)
Q Consensus 301 ~~~~~l~~l~~~G~~~~~~~~g~~------~~g-----~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~----~g~v 365 (704)
....+++.+.+.|++......+.. ... ..+.......|...+.+.+++|++++.|++|+.+ ++++
T Consensus 185 ~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra 264 (583)
T 3qvp_A 185 IVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRA 264 (583)
T ss_dssp HHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEE
T ss_pred HHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEE
Confidence 345567777788887643322110 000 0111222333444445678999999999999998 6799
Q ss_pred EEEEEcCCCCCCCCceeEEecC-eEEEcCCCChHHHH---------HHHHhCCCcccc
Q 005273 366 VGVKVSDSKDNSQSDIQKLGFD-AVILAVGHSARDIY---------EMLVSHNINLVP 413 (704)
Q Consensus 366 ~GV~~~~~~~~~~~~~~~i~Ad-~VVlAtG~~s~~~~---------~~l~~~gi~l~~ 413 (704)
+||++.+.++ ...++.|+ .||||+|+....-. +.|+++||++..
T Consensus 265 ~GV~~~~~~G----~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~ 318 (583)
T 3qvp_A 265 VGVEFGTHKG----NTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVV 318 (583)
T ss_dssp EEEEEESSTT----CEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSB
T ss_pred EEEEEEecCC----cEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCcee
Confidence 9999874322 24678886 79999999753211 356667776653
No 122
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.55 E-value=5.5e-08 Score=108.71 Aligned_cols=106 Identities=23% Similarity=0.365 Sum_probs=79.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||+|+.|+++|..|++.|.+|+|+|+.+.+...
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 221 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------------------------------------- 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----------------------------------------
Confidence 579999999999999999999999999999998654210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe-CCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE-NARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~-~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++..+ ++....|.+.+..+
T Consensus 222 -------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~-- 268 (478)
T 1v59_A 222 -------------------------------MDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKT-- 268 (478)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTT--
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCC--
Confidence 00135677788889999999999999999762 33344566552100
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
++...+.+|.||+|+|..++.
T Consensus 269 -g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 269 -NKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp -TEEEEEEESEEEECSCEEECC
T ss_pred -CCceEEECCEEEECCCCCcCC
Confidence 012578999999999987753
No 123
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=1.9e-07 Score=104.04 Aligned_cols=40 Identities=35% Similarity=0.605 Sum_probs=36.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
..+||+|||||++|+.||..|++.|++|+|+|+.+.+|+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccc
Confidence 3589999999999999999999999999999999776653
No 124
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.54 E-value=8.5e-08 Score=106.81 Aligned_cols=100 Identities=22% Similarity=0.315 Sum_probs=79.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|++|+++|..|++.|.+|+|+++.+.+...
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------------------- 204 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ----------------------------------------- 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-----------------------------------------
Confidence 578999999999999999999999999999988653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.|++++++++|+++..+++. ..|.+.++
T Consensus 205 -------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G----- 247 (463)
T 2r9z_A 205 -------------------------------FDPLLSATLAENMHAQGIETHLEFAVAALERDAQG-TTLVAQDG----- 247 (463)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE-EEEEETTC-----
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe-EEEEEeCC-----
Confidence 00124566778888999999999999999876655 45666654
Q ss_pred Ccee-EEecCeEEEcCCCChHH
Q 005273 379 SDIQ-KLGFDAVILAVGHSARD 399 (704)
Q Consensus 379 ~~~~-~i~Ad~VVlAtG~~s~~ 399 (704)
. ++.+|.||+|+|..++.
T Consensus 248 ---~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 248 ---TRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ---CEEEEESEEEECSCEEESC
T ss_pred ---cEEEEcCEEEECCCCCcCC
Confidence 3 68999999999987753
No 125
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.53 E-value=5.5e-08 Score=108.68 Aligned_cols=38 Identities=29% Similarity=0.601 Sum_probs=34.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||+.|++.|++|+|+|+.+.+|+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 42 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGG 42 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCC
Confidence 47999999999999999999999999999999776654
No 126
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.53 E-value=9.4e-08 Score=103.87 Aligned_cols=109 Identities=17% Similarity=0.268 Sum_probs=73.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
+..+|+|||||+||++||..|...+++|+|+|+.+..+..... +..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~------------------------------l~~---- 53 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPR------------------------------LNE---- 53 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGG------------------------------HHH----
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccCh------------------------------hhH----
Confidence 3568999999999999999998889999999998764311000 000
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
.+ ....+.. .+.....+.+++.|++++++++|+++..++.. |++.++
T Consensus 54 ----------~l-~g~~~~~---------------~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~---v~~~~g---- 100 (385)
T 3klj_A 54 ----------II-AKNKSID---------------DILIKKNDWYEKNNIKVITSEFATSIDPNNKL---VTLKSG---- 100 (385)
T ss_dssp ----------HH-HSCCCGG---------------GTBSSCHHHHHHTTCEEECSCCEEEEETTTTE---EEETTS----
T ss_pred ----------HH-cCCCCHH---------------HccCCCHHHHHHCCCEEEeCCEEEEEECCCCE---EEECCC----
Confidence 00 0000000 01112234556789999999999999766553 555554
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.+|.||+|||+.+
T Consensus 101 ----~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 101 ----EKIKYEKLIIASGSIA 116 (385)
T ss_dssp ----CEEECSEEEECCCEEE
T ss_pred ----CEEECCEEEEecCCCc
Confidence 3789999999999765
No 127
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.53 E-value=3e-07 Score=100.66 Aligned_cols=96 Identities=23% Similarity=0.362 Sum_probs=77.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------------------------------------
Confidence 5799999999999999999999999999999986542100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||+++++++|+++. ++ .|++.++
T Consensus 185 -------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g----- 223 (408)
T 2gqw_A 185 -------------------------------APATLADFVARYHAAQGVDLRFERSVTGSV--DG---VVLLDDG----- 223 (408)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEETTS-----
T ss_pred -------------------------------cCHHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCC-----
Confidence 001355677788889999999999999987 44 5666654
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 224 ---~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 224 ---TRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---CEEECSEEEECSCEEEC
T ss_pred ---CEEEcCEEEECcCCCcc
Confidence 37899999999998876
No 128
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.53 E-value=8.9e-08 Score=107.59 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=80.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc---CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL---GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~---g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
.++++|||+|..|+++|..|++. |.+|+|+++.+.+...
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------------------------------------- 232 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-------------------------------------- 232 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc--------------------------------------
Confidence 57999999999999999999999 9999999998653100
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKD 375 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~ 375 (704)
....+.+.+.+.+++.||+++++++|+++..+++....|.+.++
T Consensus 233 ----------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G-- 276 (495)
T 2wpf_A 233 ----------------------------------FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG-- 276 (495)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTS--
T ss_pred ----------------------------------cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCC--
Confidence 00135667788889999999999999999876544456777654
Q ss_pred CCCCceeEEecCeEEEcCCCChHH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+.+|.||+|+|..++.
T Consensus 277 ------~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 277 ------KTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp ------CEEEESEEEECSCEEECC
T ss_pred ------cEEEcCEEEECCCCcccc
Confidence 368999999999987753
No 129
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.52 E-value=2.4e-07 Score=101.67 Aligned_cols=40 Identities=40% Similarity=0.509 Sum_probs=36.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR 259 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~ 259 (704)
+||+|||||++|++||+.|++.|++|+|+|+.+.+|++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 5899999999999999999999999999999888887643
No 130
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.51 E-value=1.6e-07 Score=104.58 Aligned_cols=38 Identities=37% Similarity=0.607 Sum_probs=35.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|++||+.|++.|++|+|+|+.+.+|+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 47899999999999999999999999999999977654
No 131
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.51 E-value=1e-07 Score=106.97 Aligned_cols=40 Identities=25% Similarity=0.445 Sum_probs=37.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~~~~~~~ 258 (704)
..||+|||||++||+||+.|+++ |++|+|+|+.+.+||+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 57999999999999999999984 99999999999999864
No 132
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.51 E-value=1.7e-07 Score=107.48 Aligned_cols=118 Identities=22% Similarity=0.308 Sum_probs=74.3
Q ss_pred CCCCCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchh
Q 005273 215 PRTRKPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLV 292 (704)
Q Consensus 215 ~~~~~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~ 292 (704)
++...++|+|||||++||+||..|++. |++|+|+|+.+..+-.... +.
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~------------------------------lp 81 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCG------------------------------LP 81 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGG------------------------------HH
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCC------------------------------Cc
Confidence 344568999999999999999999998 8999999999765311000 00
Q ss_pred hhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEE-c
Q 005273 293 TRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKV-S 371 (704)
Q Consensus 293 ~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~-~ 371 (704)
..+ .+... . .. ..+...+...+++.|++++++++|+++..++..+. +.. .
T Consensus 82 ~~~----------------~g~~~---~-------~~--~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~-v~~~~ 132 (588)
T 3ics_A 82 YYI----------------GGVIT---E-------RQ--KLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTIT-IKNVT 132 (588)
T ss_dssp HHH----------------TTSSC---C-------GG--GGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEE-EEETT
T ss_pred hhh----------------cCcCC---C-------hH--HhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEE-EeecC
Confidence 000 00000 0 00 00122334445678999999999999977665432 222 1
Q ss_pred CCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 372 DSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 372 ~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
++ +...+.+|.||+|||..+
T Consensus 133 ~g------~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 133 TN------ETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp TC------CEEEEECSEEEECCCEEE
T ss_pred CC------CEEEEeCCEEEECCCCCC
Confidence 22 124789999999999754
No 133
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.50 E-value=2.4e-07 Score=103.62 Aligned_cols=38 Identities=34% Similarity=0.595 Sum_probs=34.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||+.|++.|++|+|+|+.+.+|+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG 43 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGG 43 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 47999999999999999999999999999999776654
No 134
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.50 E-value=6.3e-08 Score=103.43 Aligned_cols=36 Identities=25% Similarity=0.309 Sum_probs=32.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC------CcEEEEEeCcccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG------ADVTLIERGQAVE 255 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g------~~v~l~e~~~~~~ 255 (704)
+||+|||||++|+++|+.|+++| ++|+|+|+....+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~ 42 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPL 42 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCC
Confidence 48999999999999999999998 9999999987543
No 135
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.49 E-value=5.5e-07 Score=100.81 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHCC-CEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 331 LIPLLRNFRQHLQRLG-VTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 331 ~~~l~~~L~~~l~~~G-v~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
...+.+.|.+.+.+.| ++|+++++|++|..+++.+ .|.+.++ ..+.||.||+|+|...
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v-~v~~~~g--------~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAA-RVTARDG--------REFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSE-EEEETTC--------CEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEE-EEEECCC--------CEEEcCEEEECCCHHH
Confidence 4568888999998888 9999999999998876654 3555543 3689999999999653
No 136
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.49 E-value=9.2e-08 Score=107.07 Aligned_cols=103 Identities=20% Similarity=0.267 Sum_probs=79.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||||+.|+++|..|++.|.+|+|+|+.+.+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------------------- 223 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG----------------------------------------- 223 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------------------------------------
Confidence 679999999999999999999999999999998654100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcC-CCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSD-SKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~-~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|.++..+++. ..|++.+ ..++
T Consensus 224 -------------------------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~-~~v~~~~~~~~g- 270 (482)
T 1ojt_A 224 -------------------------------ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDG-VYVTFEGANAPK- 270 (482)
T ss_dssp -------------------------------SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTE-EEEEEESSSCCS-
T ss_pred -------------------------------cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCe-EEEEEeccCCCc-
Confidence 00135567778888899999999999999876654 3566654 1101
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+.+|.||+|+|..++.
T Consensus 271 ----~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 271 ----EPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ----SCEEESCEEECCCEEECG
T ss_pred ----eEEEcCEEEECcCCCcCC
Confidence 257899999999988764
No 137
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=8.6e-08 Score=107.23 Aligned_cols=103 Identities=21% Similarity=0.304 Sum_probs=79.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++++|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 223 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK---------------------------------------- 223 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc----------------------------------------
Confidence 3579999999999999999999999999999998653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCE-EEEEEEcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENAR-IVGVKVSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~-v~GV~~~~~~~~ 376 (704)
....+.+.+.+.+++.||+++++++|+++..+++. +..|.+.++.
T Consensus 224 --------------------------------~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~-- 269 (479)
T 2hqm_A 224 --------------------------------FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSK-- 269 (479)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSC--
T ss_pred --------------------------------cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCc--
Confidence 00135567778888899999999999999765432 4556665541
Q ss_pred CCCceeEEecCeEEEcCCCChHH
Q 005273 377 SQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+.+|.||+|+|..++.
T Consensus 270 -----~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 270 -----SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----EEEEESEEEECSCEEECC
T ss_pred -----EEEEcCEEEECCCCCCcc
Confidence 368999999999987754
No 138
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.49 E-value=2.3e-07 Score=102.68 Aligned_cols=40 Identities=30% Similarity=0.470 Sum_probs=37.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC------CcEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG------ADVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g------~~v~l~e~~~~~~~~~ 258 (704)
.+||+|||||++||+||+.|+++| ++|+|+|+.+.+|++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 479999999999999999999999 9999999999888754
No 139
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.48 E-value=1.4e-07 Score=105.40 Aligned_cols=104 Identities=25% Similarity=0.359 Sum_probs=79.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||+|+.|+++|..|++.|.+|+|+++.+.+..+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 216 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----------------------------------------- 216 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------------------------------------
Confidence 579999999999999999999999999999998654210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc---CCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS---DSKD 375 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~---~~~~ 375 (704)
.....+.+.+.+.+++.||+++++++|+++..+++....+.+. +++
T Consensus 217 ------------------------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~- 265 (474)
T 1zmd_A 217 ------------------------------GIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGK- 265 (474)
T ss_dssp ------------------------------SCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCC-
T ss_pred ------------------------------ccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCC-
Confidence 0001355677888899999999999999998766542334442 221
Q ss_pred CCCCceeEEecCeEEEcCCCChHH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..++.+|.||+|+|..++.
T Consensus 266 -----~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 266 -----AEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp -----CEEEEESEEEECSCEEECC
T ss_pred -----ceEEEcCEEEECcCCCcCC
Confidence 2579999999999987753
No 140
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.48 E-value=1.5e-07 Score=104.52 Aligned_cols=111 Identities=20% Similarity=0.273 Sum_probs=71.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
+||+|||||++|++||..|++. |++|+|+|+++..+..... ...+..+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~----------------------~~~~~~~~------- 53 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG----------------------LSAYFNHT------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc----------------------chhhhcCC-------
Confidence 5899999999999999999998 8999999999865411000 00000000
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
.. ....+...+.+.+++.|++++++++|+++..++..+. +...+ +
T Consensus 54 ----------------~~--------------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~-v~~~~-~--- 98 (452)
T 3oc4_A 54 ----------------IN--------------ELHEARYITEEELRRQKIQLLLNREVVAMDVENQLIA-WTRKE-E--- 98 (452)
T ss_dssp -------------------------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEE-EEETT-E---
T ss_pred ----------------CC--------------CHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEE-EEecC-c---
Confidence 00 0000111123455678999999999999977665432 32122 1
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
...+.+|.+|+|||..+
T Consensus 99 ---~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 99 ---QQWYSYDKLILATGASQ 115 (452)
T ss_dssp ---EEEEECSEEEECCCCCB
T ss_pred ---eEEEEcCEEEECCCccc
Confidence 25799999999999865
No 141
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.46 E-value=1.3e-07 Score=105.56 Aligned_cols=38 Identities=39% Similarity=0.594 Sum_probs=34.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||+.|++.|++|+|+|+++..++
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG 40 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEG 40 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCC
Confidence 58999999999999999999999999999999975543
No 142
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.45 E-value=6.7e-07 Score=99.20 Aligned_cols=99 Identities=28% Similarity=0.413 Sum_probs=78.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|++|+++|..|++.|.+|+|+|+.+.+...
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------------------------------- 205 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT----------------------------------------- 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----------------------------------------
Confidence 578999999999999999999999999999988653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.|++++++++|+++..+++.+ .+.+.++
T Consensus 206 -------------------------------~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g----- 248 (455)
T 2yqu_A 206 -------------------------------MDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGA-RVELEGG----- 248 (455)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEE-EEEETTS-----
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEE-EEEECCC-----
Confidence 001356677788888999999999999998776643 3455443
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+|.||+|+|..++
T Consensus 249 ---~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 249 ---EVLEADRVLVAVGRRPY 265 (455)
T ss_dssp ---CEEEESEEEECSCEEEC
T ss_pred ---eEEEcCEEEECcCCCcC
Confidence 36899999999998775
No 143
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.45 E-value=2.1e-07 Score=101.70 Aligned_cols=110 Identities=22% Similarity=0.304 Sum_probs=72.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 220 PKVAVVGGGPSGLFASLVLAE---LGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~---~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
++|+|||||++|+++|..|++ .|++|+|+|+++....+.. + .+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~----------------~--------~~---------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA----------------L--------PH---------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS----------------S--------CC----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc----------------h--------hh----------
Confidence 589999999999999999999 8999999999975421100 0 00
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDN 376 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~ 376 (704)
. ..+ ......+...+.+.+++.|++++.+ +|+.+..++. .|.+.++.+
T Consensus 48 ---------------------~-~~~-----~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~~---~V~~~~g~~- 95 (409)
T 3h8l_A 48 ---------------------V-AIG-----VRDVDELKVDLSEALPEKGIQFQEG-TVEKIDAKSS---MVYYTKPDG- 95 (409)
T ss_dssp ---------------------C-CSS-----CCCCCCEEEEHHHHTGGGTCEEEEC-EEEEEETTTT---EEEEECTTS-
T ss_pred ---------------------c-ccC-----CcCHHHHHHHHHHHHhhCCeEEEEe-eEEEEeCCCC---EEEEccCCc-
Confidence 0 000 0000012233445566789999987 8888866554 355555432
Q ss_pred CCCceeEEecCeEEEcCCCChH
Q 005273 377 SQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...++.+|.||+|+|..+.
T Consensus 96 ---~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 96 ---SMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp ---CEEEEECSEEEECCCCEEC
T ss_pred ---ccceeeCCEEEECCCCCcC
Confidence 1346899999999998653
No 144
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.44 E-value=3.6e-07 Score=103.23 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
...+||+||||||+|+.||..|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999965
No 145
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.44 E-value=1.4e-07 Score=105.10 Aligned_cols=101 Identities=19% Similarity=0.274 Sum_probs=80.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++++|||+|+.|+++|..+++.|.+|+++++.+.+...
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~---------------------------------------- 208 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR---------------------------------------- 208 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc----------------------------------------
Confidence 3679999999999999999999999999999988643100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEE-EcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVK-VSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~-~~~~~~~ 376 (704)
....+.+.+.+.+++.|++++++++|+++..+++....|. +.++
T Consensus 209 --------------------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g--- 253 (463)
T 4dna_A 209 --------------------------------FDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG--- 253 (463)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC---
T ss_pred --------------------------------cCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC---
Confidence 0013567788889999999999999999987755444566 5443
Q ss_pred CCCceeEEecCeEEEcCCCChHH
Q 005273 377 SQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
. +.+|.||+|+|..++.
T Consensus 254 -----~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 254 -----E-IVADQVMLALGRMPNT 270 (463)
T ss_dssp -----E-EEESEEEECSCEEESC
T ss_pred -----e-EEeCEEEEeeCcccCC
Confidence 3 8999999999987753
No 146
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.44 E-value=1.6e-07 Score=105.59 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=79.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++++|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 220 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY----------------------------------------- 220 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------------------------------------
Confidence 578999999999999999999999999999988653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||+++++++|+++..+++++ .|...++
T Consensus 221 -------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v-~v~~~~g----- 263 (499)
T 1xdi_A 221 -------------------------------EDADAALVLEESFAERGVRLFKNARAASVTRTGAGV-LVTMTDG----- 263 (499)
T ss_dssp -------------------------------SSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSE-EEEETTS-----
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEE-EEEECCC-----
Confidence 001356777888899999999999999998766543 3444433
Q ss_pred CceeEEecCeEEEcCCCChHH
Q 005273 379 SDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.++.+|.||+|+|..++.
T Consensus 264 ---~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 264 ---RTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ---CEEEESEEEECCCEEECC
T ss_pred ---cEEEcCEEEECCCCCcCC
Confidence 368999999999988753
No 147
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.44 E-value=4e-07 Score=102.08 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=81.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 236 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG---------------------------------------- 236 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS----------------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc----------------------------------------
Confidence 3579999999999999999999999999999988653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|.++..+++.+ .+.+.+..+
T Consensus 237 --------------------------------~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~-~v~~~~~~~-- 281 (491)
T 3urh_A 237 --------------------------------MDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGA-KVTFEPVKG-- 281 (491)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEE-EEEEEETTS--
T ss_pred --------------------------------CCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEE-EEEEEecCC--
Confidence 001356777888899999999999999998777654 355553210
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
++..++.+|.||+|+|..++.
T Consensus 282 -g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 282 -GEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp -CCCEEEEESEEEECCCCEECC
T ss_pred -CceEEEEcCEEEEeeCCccCC
Confidence 112579999999999987753
No 148
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.43 E-value=2e-07 Score=103.82 Aligned_cols=97 Identities=16% Similarity=0.245 Sum_probs=78.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 213 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------------------------------------------ 213 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------------------------------------------
Confidence 57999999999999999999999999999998764310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.|++++++++|+++..+++. ..|.+.+
T Consensus 214 -------------------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~v~~~~------ 255 (467)
T 1zk7_A 214 -------------------------------EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGE-FVLTTTH------ 255 (467)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTE-EEEEETT------
T ss_pred -------------------------------CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-EEEEECC------
Confidence 00136677888889999999999999999876553 3455542
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|.+++
T Consensus 256 ---~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 256 ---GELRADKLLVATGRTPN 272 (467)
T ss_dssp ---EEEEESEEEECSCEEES
T ss_pred ---cEEEcCEEEECCCCCcC
Confidence 36899999999998875
No 149
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.43 E-value=1.5e-06 Score=100.36 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=41.1
Q ss_pred CCEEEeCeEEEEEEEeCC--EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 346 GVTIKFGTRVDDLLIENA--RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 346 Gv~i~~~t~V~~i~~~~g--~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
|++|++++.|++|..+++ +++||++.+..+ ++..++.||.||+|+|..+..
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~---g~~~~i~A~~VIlaaG~~~s~ 326 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLIS---GDRFEIKADVYVLTAGAVHNT 326 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTT---CCEEEECEEEEEECSCTTHHH
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCC---CcEEEEECCEEEEcCCCcCCH
Confidence 799999999999998753 899999876321 134679999999999988764
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2.5e-07 Score=102.63 Aligned_cols=36 Identities=39% Similarity=0.741 Sum_probs=33.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
.+||+|||||++|++||..|++.|++|+|+|+. .+|
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~g 38 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLG 38 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCC
Confidence 479999999999999999999999999999998 444
No 151
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.43 E-value=1.9e-07 Score=104.18 Aligned_cols=103 Identities=29% Similarity=0.403 Sum_probs=80.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 218 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA---------------------------------------- 218 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc----------------------------------------
Confidence 3578999999999999999999999999999998653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++..+++.+ .+.+.++++
T Consensus 219 --------------------------------~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~-~v~~~~~~g-- 263 (476)
T 3lad_A 219 --------------------------------VDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQV-TVKFVDAEG-- 263 (476)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCE-EEEEESSSE--
T ss_pred --------------------------------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEE-EEEEEeCCC--
Confidence 001356777888899999999999999998766654 355554322
Q ss_pred CCceeEEecCeEEEcCCCChH
Q 005273 378 QSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
...+.+|.||+|+|..++
T Consensus 264 ---~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 264 ---EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ---EEEEEESEEEECSCEEEC
T ss_pred ---cEEEECCEEEEeeCCccc
Confidence 247899999999998765
No 152
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.43 E-value=2.5e-08 Score=113.83 Aligned_cols=66 Identities=23% Similarity=0.223 Sum_probs=49.9
Q ss_pred HCCCEEEeCeEEEEEEEe--CCEEEEEEEcCCCCCCCCceeEEec-CeEEEcCCCChHHH---------HHHHHhCCCcc
Q 005273 344 RLGVTIKFGTRVDDLLIE--NARIVGVKVSDSKDNSQSDIQKLGF-DAVILAVGHSARDI---------YEMLVSHNINL 411 (704)
Q Consensus 344 ~~Gv~i~~~t~V~~i~~~--~g~v~GV~~~~~~~~~~~~~~~i~A-d~VVlAtG~~s~~~---------~~~l~~~gi~l 411 (704)
+.+++|++++.|++|+.+ +++++||++.+.++ ...++.| +.||||+|+....- .+.|+++|+++
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g----~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~v 293 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAG----NELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINT 293 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTS----CEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCC
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCC----cEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCe
Confidence 458999999999999998 78999999875422 2457888 67999999864321 14567788876
Q ss_pred cc
Q 005273 412 VP 413 (704)
Q Consensus 412 ~~ 413 (704)
..
T Consensus 294 v~ 295 (577)
T 3q9t_A 294 IV 295 (577)
T ss_dssp SE
T ss_pred ec
Confidence 53
No 153
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.42 E-value=2.7e-07 Score=98.95 Aligned_cols=36 Identities=33% Similarity=0.550 Sum_probs=33.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
.+||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 579999999999999999999999999999998643
No 154
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=6.4e-07 Score=99.13 Aligned_cols=100 Identities=22% Similarity=0.232 Sum_probs=78.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|++|+++|..|++.|.+|+|+|+.+.+..+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY--------------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------------------------------------
Confidence 46899999999999999999999999999999986532100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.|++++++++|+++..+ +++..+.+.+
T Consensus 189 --------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~----- 230 (447)
T 1nhp_A 189 --------------------------------LDKEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVTDK----- 230 (447)
T ss_dssp --------------------------------CCHHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEESS-----
T ss_pred --------------------------------CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEECC-----
Confidence 00135667788888999999999999998754 5554555532
Q ss_pred CCceeEEecCeEEEcCCCChH
Q 005273 378 QSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 231 ----~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 231 ----NAYDADLVVVAVGVRPN 247 (447)
T ss_dssp ----CEEECSEEEECSCEEES
T ss_pred ----CEEECCEEEECcCCCCC
Confidence 26899999999998764
No 155
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.42 E-value=4e-07 Score=101.66 Aligned_cols=108 Identities=17% Similarity=0.166 Sum_probs=80.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 225 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS----------------------------------------- 225 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-----------------------------------------
Confidence 579999999999999999999999999999987653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCE-EEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENAR-IVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~-v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||++++++.|+++..+++. ...+.+.+...+.
T Consensus 226 -------------------------------~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~ 274 (478)
T 3dk9_A 226 -------------------------------FDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLP 274 (478)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCC
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCc
Confidence 00135667788889999999999999999875443 3446665432110
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.....+.+|.||+|+|..++.
T Consensus 275 -~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 275 -VMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp -EEEEEEEESEEEECSCEEESC
T ss_pred -ccceEEEcCEEEEeeccccCC
Confidence 001478999999999987653
No 156
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.41 E-value=2.1e-07 Score=103.54 Aligned_cols=102 Identities=25% Similarity=0.381 Sum_probs=78.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||+|+.|+++|..|++.|.+|+|+++.+.+...
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 209 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN----------------------------------------- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------------------------------------
Confidence 579999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc-CCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS-DSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~-~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++..+++.+ .+.+. +++
T Consensus 210 -------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g~--- 254 (464)
T 2a8x_A 210 -------------------------------EDADVSKEIEKQFKKLGVTILTATKVESIADGGSQV-TVTVTKDGV--- 254 (464)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCE-EEEEESSSC---
T ss_pred -------------------------------cCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeE-EEEEEcCCc---
Confidence 001355667788888999999999999997665543 34444 331
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..++.+|.||+|+|..++.
T Consensus 255 ---~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 255 ---AQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ---EEEEEESEEEECSCEEECC
T ss_pred ---eEEEEcCEEEECCCCCccC
Confidence 2478999999999987753
No 157
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.41 E-value=4.7e-07 Score=101.00 Aligned_cols=38 Identities=32% Similarity=0.596 Sum_probs=35.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||..|++.|++|+|+|+.+.+|+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG 43 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCC
Confidence 47999999999999999999999999999999977654
No 158
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.41 E-value=1.2e-06 Score=98.25 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
..+||+||||||+|+.||..|++.|++|+|+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 3589999999999999999999999999999984
No 159
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.41 E-value=2.3e-07 Score=102.56 Aligned_cols=120 Identities=23% Similarity=0.307 Sum_probs=87.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||||+.|+++|..+++.|.+|+|+++.+.+....
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~---------------------------------------- 186 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM---------------------------------------- 186 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS----------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc----------------------------------------
Confidence 5689999999999999999999999999999987642100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
+ ..+.+.+.+.+++.||+++++++|+++. .+ .+.+.++
T Consensus 187 ------------------------------d--~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~---~v~~~~g----- 224 (437)
T 4eqs_A 187 ------------------------------D--ADMNQPILDELDKREIPYRLNEEINAIN--GN---EITFKSG----- 224 (437)
T ss_dssp ------------------------------C--GGGGHHHHHHHHHTTCCEEESCCEEEEE--TT---EEEETTS-----
T ss_pred ------------------------------c--chhHHHHHHHhhccceEEEeccEEEEec--CC---eeeecCC-----
Confidence 0 0134567778889999999999998863 33 3556655
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCccc---------------ccceeeEEEEecc
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV---------------PKDFAVGLRMEHP 425 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~---------------~~~~avG~~~~~p 425 (704)
+.+.+|.||+|+|..++. ..++..|+.+. |..|++|+.+..|
T Consensus 225 ---~~~~~D~vl~a~G~~Pn~--~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~ 281 (437)
T 4eqs_A 225 ---KVEHYDMIIEGVGTHPNS--KFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSH 281 (437)
T ss_dssp ---CEEECSEEEECCCEEESC--GGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEE
T ss_pred ---eEEeeeeEEEEeceecCc--HHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcc
Confidence 478999999999987753 23444444332 4567777766544
No 160
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.41 E-value=1.1e-06 Score=97.91 Aligned_cols=112 Identities=29% Similarity=0.400 Sum_probs=85.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
..++|+|||+|+.|+++|..|++. |.+|+++++.+.+..+
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~--------------------------------------- 198 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG--------------------------------------- 198 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT---------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc---------------------------------------
Confidence 357999999999999999999999 9999999988653110
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDN 376 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~ 376 (704)
.....+.+.+.+.+++.||+++++++|+++..+++++. |.+.++
T Consensus 199 --------------------------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~~~g--- 242 (472)
T 3iwa_A 199 --------------------------------FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVITDK--- 242 (472)
T ss_dssp --------------------------------TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEEESS---
T ss_pred --------------------------------ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEEeCC---
Confidence 00013667788888999999999999999987677665 666554
Q ss_pred CCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 377 SQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.++.+|.||+|+|..++.. ++...|+.+
T Consensus 243 -----~~i~aD~Vv~a~G~~p~~~--l~~~~gl~~ 270 (472)
T 3iwa_A 243 -----RTLDADLVILAAGVSPNTQ--LARDAGLEL 270 (472)
T ss_dssp -----CEEECSEEEECSCEEECCH--HHHHHTCCB
T ss_pred -----CEEEcCEEEECCCCCcCHH--HHHhCCccC
Confidence 3799999999999987632 344445544
No 161
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=1.4e-07 Score=104.88 Aligned_cols=101 Identities=25% Similarity=0.364 Sum_probs=75.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+++|+|||||++|+++|..|++.|.+|+|+|+.+.+...
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 209 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---------------------------------------- 209 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT----------------------------------------
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc----------------------------------------
Confidence 3579999999999999999999999999999998654200
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++.. +. ..+...+++
T Consensus 210 --------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~-v~v~~~~G~--- 251 (458)
T 1lvl_A 210 --------------------------------YDSELTAPVAESLKKLGIALHLGHSVEGYEN--GC-LLANDGKGG--- 251 (458)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHHTCEEETTCEEEEEET--TE-EEEECSSSC---
T ss_pred --------------------------------cCHHHHHHHHHHHHHCCCEEEECCEEEEEEe--CC-EEEEECCCc---
Confidence 0013556677788889999999999999864 43 223311221
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
...+.+|.||+|+|..++.
T Consensus 252 ---~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 252 ---QLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ---CCEECCSCEEECCCEEECC
T ss_pred ---eEEEECCEEEECcCCCcCC
Confidence 2478999999999987753
No 162
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=3.1e-07 Score=101.66 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=32.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCcccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAVE 255 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~~ 255 (704)
+||+|||||++|+.||..|++. |++|+|+|+.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999987643
No 163
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.40 E-value=3.7e-07 Score=99.91 Aligned_cols=107 Identities=19% Similarity=0.283 Sum_probs=70.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCc--EEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGAD--VTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~--v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
++|+|||||++|++||..|++.|++ |+|+|+.+..... .+.+...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~------------------------------~~~l~~~--- 49 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD------------------------------RPSLSKA--- 49 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC------------------------------SGGGGTH---
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC------------------------------CccccHH---
Confidence 5899999999999999999999987 9999998754211 0000000
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
+.....+...+ ....+.+++.|++++++++|+.+..+.. .|.+.++
T Consensus 50 -----------~~~g~~~~~~~----------------~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g---- 95 (410)
T 3ef6_A 50 -----------VLDGSLERPPI----------------LAEADWYGEARIDMLTGPEVTALDVQTR---TISLDDG---- 95 (410)
T ss_dssp -----------HHHTSSSSCCB----------------SSCTTHHHHTTCEEEESCCEEEEETTTT---EEEETTS----
T ss_pred -----------HhCCCCCHHHh----------------cCCHHHHHHCCCEEEeCCEEEEEECCCC---EEEECCC----
Confidence 00000000000 0012234568999999999999876544 3455554
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.+|+|||..+
T Consensus 96 ----~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 96 ----TTLSADAIVIATGSRA 111 (410)
T ss_dssp ----CEEECSEEEECCCEEE
T ss_pred ----CEEECCEEEEccCCcc
Confidence 3689999999999765
No 164
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=2.7e-07 Score=102.83 Aligned_cols=105 Identities=20% Similarity=0.245 Sum_probs=78.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+++|+|||+|+.|+++|..|++.|.+|+|+++.+.+...
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 212 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT---------------------------------------- 212 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT----------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc----------------------------------------
Confidence 3579999999999999999999999999999988653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHH-HHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHL-QRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l-~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~ 376 (704)
....+.+.+.+.+ ++.||+++++++|+++..+++.+ .+.+.+.++
T Consensus 213 --------------------------------~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g- 258 (468)
T 2qae_A 213 --------------------------------LDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSV-SLEVEGKNG- 258 (468)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSE-EEEEECC---
T ss_pred --------------------------------CCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeE-EEEEEcCCC-
Confidence 0013566778888 89999999999999998765543 455542111
Q ss_pred CCCceeEEecCeEEEcCCCChHH
Q 005273 377 SQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..++.+|.||+|+|..++.
T Consensus 259 ---~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 259 ---KRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ----EEEEEESEEEECSCEEECC
T ss_pred ---ceEEEECCEEEECCCcccCC
Confidence 12478999999999988753
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.40 E-value=2.6e-07 Score=103.36 Aligned_cols=36 Identities=22% Similarity=0.489 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
.+||+|||||++|++||..|++. |++|+|+|+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 47999999999999999999996 8999999998764
No 166
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.40 E-value=2.6e-07 Score=105.36 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=32.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
++|+|||||+||++||..|++. |++|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 5899999999999999999998 8899999999765
No 167
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.40 E-value=1.3e-06 Score=98.59 Aligned_cols=41 Identities=39% Similarity=0.535 Sum_probs=37.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGR 259 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~ 259 (704)
.+||+|||||++||+||+.|++.|++|+|+|+.+.+|++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 46899999999999999999999999999999999988753
No 168
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.40 E-value=3.1e-07 Score=100.61 Aligned_cols=109 Identities=22% Similarity=0.295 Sum_probs=71.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCc--EEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGAD--VTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIG 296 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~--v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~ 296 (704)
.++|+|||||++|++||..|++.|++ |+|+|+.+...... ..+...+.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~------------------------------~~l~~~~~ 58 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER------------------------------PPLSKEYL 58 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS------------------------------GGGGTTTT
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc------------------------------ccCCHHHH
Confidence 57999999999999999999999987 99999987542110 00000000
Q ss_pred cCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCC
Q 005273 297 RNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDN 376 (704)
Q Consensus 297 ~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~ 376 (704)
.+. .....+.....+.+.+.|++++.+++|+.+..++. .|.+.++
T Consensus 59 ------------------------~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g--- 103 (415)
T 3lxd_A 59 ------------------------ARE-----KTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAH---TVKLGDG--- 103 (415)
T ss_dssp ------------------------TTS-----SCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTT---EEEETTS---
T ss_pred ------------------------cCC-----CCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCC---EEEECCC---
Confidence 000 00000111123455678999999999999865544 2445544
Q ss_pred CCCceeEEecCeEEEcCCCCh
Q 005273 377 SQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+|.+|+|||+.+
T Consensus 104 -----~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 104 -----SAIEYGKLIWATGGDP 119 (415)
T ss_dssp -----CEEEEEEEEECCCEEC
T ss_pred -----CEEEeeEEEEccCCcc
Confidence 3789999999999754
No 169
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.38 E-value=1.1e-06 Score=98.59 Aligned_cols=39 Identities=26% Similarity=0.520 Sum_probs=35.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
.+||+||||||+|+.||+.|++.|++|+|+|+.+.+|+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~ 63 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGT 63 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 589999999999999999999999999999998777653
No 170
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.38 E-value=3.3e-07 Score=101.66 Aligned_cols=35 Identities=37% Similarity=0.334 Sum_probs=32.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
+||+|||||++|+.||..|++. |++|+|+|+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 9999999998754
No 171
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.38 E-value=1.8e-07 Score=101.29 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=32.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
+||+|||||++|+++|+.|++. |++|+|+|+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999999 9999999998765
No 172
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=1.5e-07 Score=104.93 Aligned_cols=102 Identities=21% Similarity=0.351 Sum_probs=78.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+++.+.+...
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 215 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------------------------------- 215 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------------------------------------
Confidence 579999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEc---CCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVS---DSKD 375 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~---~~~~ 375 (704)
....+.+.+.+.+++.||+++++++|.++..+++.+ .+.+. +++
T Consensus 216 -------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~- 262 (470)
T 1dxl_A 216 -------------------------------MDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGE- 262 (470)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSE-EEEEEESSSCC-
T ss_pred -------------------------------ccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeE-EEEEEecCCCc-
Confidence 001356677888899999999999999997655433 35544 221
Q ss_pred CCCCceeEEecCeEEEcCCCChHH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
...+.+|.||+|+|..++.
T Consensus 263 -----~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 263 -----QTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp -----CEEEEESEEECCCCEEECC
T ss_pred -----ceEEECCEEEECCCCCcCC
Confidence 2478999999999987753
No 173
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.38 E-value=1.2e-06 Score=98.26 Aligned_cols=100 Identities=19% Similarity=0.294 Sum_probs=80.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc---CCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL---GADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~---g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
.++++|||+|+.|+++|..|++. |.+|+|+++.+.+...
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------------------------------------- 228 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG-------------------------------------- 228 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------------------------
Confidence 57999999999999999999999 9999999998653100
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKD 375 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~ 375 (704)
....+.+.+.+.+++.||+++++++|+++..+++....|.+.++
T Consensus 229 ----------------------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G-- 272 (490)
T 1fec_A 229 ----------------------------------FDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG-- 272 (490)
T ss_dssp ----------------------------------SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS--
T ss_pred ----------------------------------cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC--
Confidence 00135677888889999999999999999876544345666654
Q ss_pred CCCCceeEEecCeEEEcCCCChH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+|.||+|+|..++
T Consensus 273 ------~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 273 ------AEADYDVVMLAIGRVPR 289 (490)
T ss_dssp ------CEEEESEEEECSCEEES
T ss_pred ------cEEEcCEEEEccCCCcC
Confidence 36899999999998775
No 174
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.37 E-value=4e-07 Score=100.40 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
.++|+|||||++|++||..|++.|+ +|+|+|+.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 4799999999999999999999998 7999998764
No 175
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.37 E-value=3.8e-07 Score=101.04 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=32.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
.++|+|||||++|++||+.|++. |++|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 8899999998754
No 176
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=2e-06 Score=95.33 Aligned_cols=102 Identities=18% Similarity=0.283 Sum_probs=78.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|++|+++|..|++.|.+|+|+|+.+.+...
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG----------------------------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------------------------------------
Confidence 579999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.|++++++++|+++..+++.+ .+.+.+..
T Consensus 209 -------------------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~~g---- 252 (455)
T 1ebd_A 209 -------------------------------FEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGV-TVTYEANG---- 252 (455)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEE-EEEEEETT----
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeE-EEEEEeCC----
Confidence 001355677788889999999999999998766653 34443211
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+...+.+|.||+|+|..++
T Consensus 253 -~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 253 -ETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -EEEEEEESEEEECSCEEES
T ss_pred -ceeEEEcCEEEECcCCCcc
Confidence 1247899999999998764
No 177
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.37 E-value=6.2e-07 Score=100.46 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=78.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++...+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------------------------ 222 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG------------------------------------------ 222 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc------------------------------------------
Confidence 56899999999999999999999999999998642100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||++++++.+.++...++....|.+.+..++
T Consensus 223 -------------------------------~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g-- 269 (488)
T 3dgz_A 223 -------------------------------FDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASG-- 269 (488)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTT--
T ss_pred -------------------------------CCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCC--
Confidence 00135677788889999999999999999774443334555543211
Q ss_pred CceeEEecCeEEEcCCCChHH
Q 005273 379 SDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..++.+|.||+|+|..++.
T Consensus 270 -~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 270 -KEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp -EEEEEEESEEEECSCEEESC
T ss_pred -eeEEEECCEEEEcccCCccc
Confidence 12358999999999987653
No 178
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.37 E-value=4.7e-07 Score=99.98 Aligned_cols=107 Identities=19% Similarity=0.292 Sum_probs=72.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH---cCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE---LGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~---~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
.++|+|||||++|++||..|++ .|++|+|+|+.+...... .+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-------------------------------~~---- 48 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-------------------------------SN---- 48 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-------------------------------GH----
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-------------------------------Cc----
Confidence 4689999999999999999999 899999999987532100 00
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKD 375 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~ 375 (704)
. +. ..| ......+...+.+.+++.|++++. .+|+.+..++. .|.+.++
T Consensus 49 -------~----~~-~~g--------------~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~~---~V~~~~g-- 96 (437)
T 3sx6_A 49 -------P----WV-GVG--------------WKERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEAQ---NITLADG-- 96 (437)
T ss_dssp -------H----HH-HHT--------------SSCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTTT---EEEETTS--
T ss_pred -------c----cc-ccC--------------ccCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCCC---EEEECCC--
Confidence 0 00 000 011112333455666778999984 68888866554 3555554
Q ss_pred CCCCceeEEecCeEEEcCCCChH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 97 ------~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 97 ------NTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ------CEEECSEEEECCCCEEC
T ss_pred ------CEEECCEEEECCCCCcC
Confidence 36899999999998763
No 179
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.37 E-value=4.7e-07 Score=100.92 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
.++|+|||||++|++||..|++. |++|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 36899999999999999999998 9999999999764
No 180
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.37 E-value=2e-06 Score=95.26 Aligned_cols=99 Identities=20% Similarity=0.276 Sum_probs=80.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++++|||+|..|+++|..|++.|.+|+++++.+.+..+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 185 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK----------------------------------------- 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-----------------------------------------
Confidence 578999999999999999999999999999998654110
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.....+.+.+.+.+++.||+++++++|+++..+++++ .|.+.++
T Consensus 186 ------------------------------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~~~g----- 229 (452)
T 3oc4_A 186 ------------------------------YFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLETSEQ----- 229 (452)
T ss_dssp ------------------------------TCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEESSC-----
T ss_pred ------------------------------cCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEECCC-----
Confidence 0001366778888899999999999999998777776 6666432
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
++.+|.||+|+|..++
T Consensus 230 ----~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 230 ----EISCDSGIFALNLHPQ 245 (452)
T ss_dssp ----EEEESEEEECSCCBCC
T ss_pred ----EEEeCEEEECcCCCCC
Confidence 6899999999998764
No 181
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.37 E-value=1.8e-06 Score=90.39 Aligned_cols=103 Identities=22% Similarity=0.477 Sum_probs=80.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------ 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc------------------------------------------
Confidence 57899999999999999999999999999988754210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
...+.+.+.+.+++.||+++++++|+++..+++++.+|++.+..+ +
T Consensus 183 --------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~--~ 228 (320)
T 1trb_A 183 --------------------------------EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQN--S 228 (320)
T ss_dssp --------------------------------CHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTT--C
T ss_pred --------------------------------CHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccC--C
Confidence 012445667778889999999999999987776888888876211 0
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
++..++.+|.||+|+|..+
T Consensus 229 g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 229 DNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp CCCEEEECSEEEECSCEEE
T ss_pred CceEEEEcCEEEEEeCCCC
Confidence 0125799999999999654
No 182
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.37 E-value=2e-06 Score=95.23 Aligned_cols=100 Identities=17% Similarity=0.265 Sum_probs=79.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+++.+.+..+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 187 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------------------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------------------------------
Confidence 578999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.....+.+.+.+.+++.|++++++++|+++..+++++..+.+ ++
T Consensus 188 ------------------------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g----- 231 (452)
T 2cdu_A 188 ------------------------------YFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DG----- 231 (452)
T ss_dssp ------------------------------TSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TS-----
T ss_pred ------------------------------hhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CC-----
Confidence 000135667788889999999999999999876777766654 32
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 232 ---~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 232 ---KEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ---CEEEESEEEECCCEEEC
T ss_pred ---CEEECCEEEECcCCCCC
Confidence 36899999999998765
No 183
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.36 E-value=9.9e-07 Score=98.66 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
..+||+||||||+|+.||+.|++.|++|+|+|+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999964
No 184
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.36 E-value=7.7e-07 Score=98.17 Aligned_cols=58 Identities=24% Similarity=0.319 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+.|.+.+++.|++|+++++|++|..+++++++|.. ++ .++.||.||+|+|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g--------~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EG--------EVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TT--------EEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CC--------eEEECCEEEECCCCCcc
Confidence 468889999999999999999999999999999888875 33 47999999999998863
No 185
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.36 E-value=3.5e-07 Score=101.77 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=32.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
+||+|||||++|++||+.|++.|++|+|+|+. ..|
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~g 38 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWG 38 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCC
Confidence 68999999999999999999999999999998 443
No 186
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.36 E-value=2.4e-07 Score=92.60 Aligned_cols=39 Identities=28% Similarity=0.463 Sum_probs=36.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
.||+||||||+||+||+.|+++|++|+||||.+.+|++.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc
Confidence 689999999999999999999999999999999887653
No 187
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.36 E-value=6.7e-07 Score=99.53 Aligned_cols=34 Identities=35% Similarity=0.628 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.+||+|||||++|+.||..|++.|++|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999999999999999999999999986
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.6e-06 Score=96.23 Aligned_cols=37 Identities=32% Similarity=0.651 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|++||..|++.|++|+|+|+ ..+|+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG 41 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGG 41 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCC
Confidence 47999999999999999999999999999999 45543
No 189
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.36 E-value=2.2e-06 Score=95.80 Aligned_cols=41 Identities=34% Similarity=0.536 Sum_probs=37.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
..+||+|||||++||+||+.|++.|++|+|+|+.+.+|++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 35799999999999999999999999999999999988864
No 190
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.5e-06 Score=97.77 Aligned_cols=100 Identities=21% Similarity=0.313 Sum_probs=78.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+++.+.+...
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 214 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK----------------------------------------- 214 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-----------------------------------------
Confidence 679999999999999999999999999999998654100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||+++++++|+++..+++....|.+.++
T Consensus 215 -------------------------------~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g----- 258 (500)
T 1onf_A 215 -------------------------------FDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDG----- 258 (500)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTS-----
T ss_pred -------------------------------cchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCC-----
Confidence 00135567788889999999999999999765433345666554
Q ss_pred CceeE-EecCeEEEcCCCChH
Q 005273 379 SDIQK-LGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~-i~Ad~VVlAtG~~s~ 398 (704)
.. +.+|.||+|+|..++
T Consensus 259 ---~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 259 ---RIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp ---CEEEEESEEEECCCBCCT
T ss_pred ---cEEEECCEEEECCCCCcC
Confidence 24 899999999998875
No 191
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.35 E-value=3.6e-07 Score=101.76 Aligned_cols=38 Identities=24% Similarity=0.361 Sum_probs=34.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||..|++.|++|+|+|+.+.+|+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG 41 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG 41 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 47999999999999999999999999999998877764
No 192
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=3.5e-07 Score=98.64 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
..||+|||||+||++||..|++.| +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 579999999999999999999999 99999998653
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.34 E-value=3.5e-07 Score=102.69 Aligned_cols=112 Identities=21% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||||++|++||+.|++. ++|+|+|+++.+++.... . +..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~-----------~-~~~---------------------- 152 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL-----------K-GIK---------------------- 152 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG-----------T-CSE----------------------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec-----------c-ccc----------------------
Confidence 46899999999999999999999 999999999876532100 0 000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.+|++ + ....+...+.+.+ +.|+++++++.|.++..++..+......++
T Consensus 153 ------------~~g~~-----------~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~----- 201 (493)
T 1y56_A 153 ------------QEGFN-----------K--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGD----- 201 (493)
T ss_dssp ------------ETTTT-----------E--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETT-----
T ss_pred ------------cCCCC-----------C--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCC-----
Confidence 00000 0 1123445555555 669999999999988776554433222222
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
+...+.+|.+|+|||...
T Consensus 202 -~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 202 -KLIEILAKRVVLATGAID 219 (493)
T ss_dssp -EEEEEEESCEEECCCEEE
T ss_pred -eEEEEECCEEEECCCCCc
Confidence 123689999999999865
No 194
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.33 E-value=3.2e-07 Score=102.05 Aligned_cols=37 Identities=27% Similarity=0.421 Sum_probs=33.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|++||+.|++.|++|+|+|+ ..+|+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG 41 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGG 41 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCC
Confidence 47999999999999999999999999999999 44543
No 195
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.33 E-value=1.7e-06 Score=96.77 Aligned_cols=99 Identities=21% Similarity=0.308 Sum_probs=78.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|++|+++|..|++.|.+|+|+++.+.+...
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 224 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI---------------------------------------- 224 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc----------------------------------------
Confidence 4679999999999999999999999999999988653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.|++++++++|+++..+ +++..+.+.+
T Consensus 225 --------------------------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~~~----- 266 (480)
T 3cgb_A 225 --------------------------------YDGDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVETDK----- 266 (480)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEETT-----
T ss_pred --------------------------------CCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEECC-----
Confidence 00135667788889999999999999998754 5566666542
Q ss_pred CCceeEEecCeEEEcCCCChH
Q 005273 378 QSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 267 ----~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 267 ----GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ----EEEECSEEEECSCEEES
T ss_pred ----CEEEcCEEEECcCCCcC
Confidence 36899999999998764
No 196
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.32 E-value=7.7e-07 Score=97.12 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=32.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQAV 254 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~~ 254 (704)
++|+|||||++|++||..|++.|+ +|+|+|+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 689999999999999999999999 89999998743
No 197
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.31 E-value=3.8e-07 Score=102.24 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC---CcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG---ADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g---~~v~l~e~~~~~ 254 (704)
.+||+|||||++|+.||..|++.| ++|+|+|+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 479999999999999999999988 999999998754
No 198
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.31 E-value=1.3e-06 Score=96.99 Aligned_cols=37 Identities=32% Similarity=0.605 Sum_probs=34.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
+||+||||||+|++||..|++.|++|+|+|+++.+|+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG 38 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGG 38 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCC
Confidence 6899999999999999999999999999999977654
No 199
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=2.6e-06 Score=96.33 Aligned_cols=40 Identities=25% Similarity=0.467 Sum_probs=35.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
...+||+|||||++|++||+.|++.|++|+|+|+++.+|+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG 80 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGG 80 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 3468999999999999999999999999999999976654
No 200
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.30 E-value=3.2e-06 Score=96.08 Aligned_cols=62 Identities=21% Similarity=0.233 Sum_probs=43.9
Q ss_pred HHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 337 NFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 337 ~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+.+.+.+ .|++|++++.|++|+.++++++||++.+..++.........++.||+|+|++..
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 34455554 589999999999999988899999997631110000012378999999999753
No 201
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.30 E-value=5.4e-07 Score=99.55 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCccc
Q 005273 221 KVAVVGGGPSGLFASLVLAELG--ADVTLIERGQAV 254 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~~ 254 (704)
+|+||||||||++||..|++.| .+|+|+|+++..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 6999999999999999999988 469999998653
No 202
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.30 E-value=8.3e-07 Score=99.12 Aligned_cols=36 Identities=33% Similarity=0.504 Sum_probs=33.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
.+||+|||||++|+.||+.|++.|++|+|+|++ .+|
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~G 55 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLG 55 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCC
Confidence 589999999999999999999999999999977 444
No 203
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.30 E-value=2.4e-06 Score=95.49 Aligned_cols=104 Identities=19% Similarity=0.182 Sum_probs=79.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++++|||+|+.|+++|..|++.|.+|+++++......
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------------------------ 224 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG------------------------------------------ 224 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc------------------------------------------
Confidence 56899999999999999999999999999988532100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||++++++.|.++..+++....|.+.++..
T Consensus 225 -------------------------------~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~--- 270 (483)
T 3dgh_A 225 -------------------------------FDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVET--- 270 (483)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTT---
T ss_pred -------------------------------cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCC---
Confidence 0013567778888999999999999999987554333466665431
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
++..++.+|.||+|+|..++
T Consensus 271 ~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 271 GEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp CCEEEEEESEEEECSCEEEC
T ss_pred CceeEEEcCEEEECcccccC
Confidence 12347899999999998764
No 204
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.30 E-value=4.4e-07 Score=103.30 Aligned_cols=74 Identities=15% Similarity=0.221 Sum_probs=51.9
Q ss_pred HHHHHHHHHCCCEEEeCeEEEEEEEe----C-CEEEEEEEcCCCCCCCCceeEEec-CeEEEcCCCChHH-H--------
Q 005273 336 RNFRQHLQRLGVTIKFGTRVDDLLIE----N-ARIVGVKVSDSKDNSQSDIQKLGF-DAVILAVGHSARD-I-------- 400 (704)
Q Consensus 336 ~~L~~~l~~~Gv~i~~~t~V~~i~~~----~-g~v~GV~~~~~~~~~~~~~~~i~A-d~VVlAtG~~s~~-~-------- 400 (704)
..|...+.+.+++|++++.|++|+.+ + ++++||++.+..+. ...+++| +.||||+|+.... +
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~---~~~~v~A~kEVILsAGai~SPqlL~lSGIGp 288 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGA---PTTTVCAKKEVVLSAGSVGTPILLQLSGIGD 288 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTS---CCEEEEEEEEEEECCHHHHHHHHHHHTTEEC
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCc---eEEEEEeeeEEEEecCCcCChHHHHhcCCCC
Confidence 33444445668999999999999987 3 58899998764320 2357888 7899999986421 1
Q ss_pred HHHHHhCCCccc
Q 005273 401 YEMLVSHNINLV 412 (704)
Q Consensus 401 ~~~l~~~gi~l~ 412 (704)
.+.|+++||++.
T Consensus 289 ~~~L~~~gI~vv 300 (566)
T 3fim_B 289 ENDLSSVGIDTI 300 (566)
T ss_dssp HHHHHHTTCCCS
T ss_pred hHHHhhcCCCce
Confidence 135667787765
No 205
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.29 E-value=2.4e-06 Score=103.48 Aligned_cols=118 Identities=20% Similarity=0.241 Sum_probs=76.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.+||+|||+||||+.||..|++.|++|+|||+++.+|++.. . +. +
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-----------~--~~--------------k-------- 172 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-----------D--TA--------------G-------- 172 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-----------G--SS--------------C--------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-----------c--CC--------------c--------
Confidence 47899999999999999999999999999999877653211 0 00 0
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
..+ .+ .....+...+.+.+.+. +++++.+++|.++. .++.+..+......-..
T Consensus 173 ------------------~~i-~~------~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~-~~~~~~~v~~~~~~~~v 226 (965)
T 2gag_A 173 ------------------EQI-DG------MDSSAWIEQVTSELAEAEETTHLQRTTVFGSY-DANYLIAAQRRTVHLDG 226 (965)
T ss_dssp ------------------CEE-TT------EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEE-TTTEEEEEEECSTTCSS
T ss_pred ------------------ccc-CC------CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeee-cCCceeeeEeecccccc
Confidence 000 00 00123455666677775 99999999998875 34444444321110000
Q ss_pred -------CCceeEEecCeEEEcCCCCh
Q 005273 378 -------QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 -------~~~~~~i~Ad~VVlAtG~~s 397 (704)
.+....+.+|.||+|||+.+
T Consensus 227 ~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 227 PSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp CCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred cccccCCCCceEEEECCEEEECCCCcc
Confidence 01124689999999999865
No 206
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.29 E-value=2.9e-06 Score=95.06 Aligned_cols=100 Identities=25% Similarity=0.347 Sum_probs=78.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+|+++.+.+..+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 232 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG---------------------------------------- 232 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------------------------------------
Confidence 4679999999999999999999999999999998653110
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
.....+.+.+.+.+++.||+++++++|+++.. ++++..|.+ ++
T Consensus 233 -------------------------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g---- 275 (490)
T 2bc0_A 233 -------------------------------YYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DK---- 275 (490)
T ss_dssp -------------------------------TSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SS----
T ss_pred -------------------------------HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CC----
Confidence 00013566777888899999999999999875 555555655 32
Q ss_pred CCceeEEecCeEEEcCCCChH
Q 005273 378 QSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.++.+|.||+|+|..++
T Consensus 276 ----~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 276 ----NEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ----CEEECSEEEECCCEEEC
T ss_pred ----cEEECCEEEECCCCCcC
Confidence 36899999999998764
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.29 E-value=4e-06 Score=95.47 Aligned_cols=100 Identities=25% Similarity=0.353 Sum_probs=78.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 189 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP----------------------------------------- 189 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----------------------------------------
Confidence 578999999999999999999999999999998653100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe-----------------
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE----------------- 361 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~----------------- 361 (704)
....+...+.+.+++.||++++++.|.++..+
T Consensus 190 -------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 238 (565)
T 3ntd_A 190 -------------------------------VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQ 238 (565)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTC
T ss_pred -------------------------------cCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccc
Confidence 00135567778888999999999999999873
Q ss_pred --CCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 362 --NARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 362 --~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
++++. +.+.++ .++.+|.||+|+|..++.
T Consensus 239 ~~~~~~~-v~~~~g--------~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 239 HIKGHLS-LTLSNG--------ELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CTTCEEE-EEETTS--------CEEEESEEEECSCEEECC
T ss_pred cCCCcEE-EEEcCC--------CEEEcCEEEECcCCccch
Confidence 44443 444443 378999999999998763
No 208
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.28 E-value=4.9e-07 Score=101.10 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=33.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|++||+.|++.|++|+|+|++ ..|+
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG 47 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGG 47 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTH
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCC
Confidence 579999999999999999999999999999997 4443
No 209
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.28 E-value=3.3e-06 Score=93.85 Aligned_cols=39 Identities=28% Similarity=0.510 Sum_probs=36.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCcccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQAVEQR 257 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~~~~~ 257 (704)
.+||+|||||++||+||+.|++.| ++|+|+|+.+.+|++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 469999999999999999999999 999999999888764
No 210
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.28 E-value=1.5e-06 Score=96.72 Aligned_cols=37 Identities=32% Similarity=0.478 Sum_probs=33.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|+.||..|++.|++|+|+|++ .+|+
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG 40 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGG 40 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCC
Confidence 579999999999999999999999999999998 4443
No 211
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.26 E-value=5.1e-07 Score=99.41 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=33.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHH--cCCcEEEEEeCcccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAE--LGADVTLIERGQAVE 255 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~--~g~~v~l~e~~~~~~ 255 (704)
++|+|||||++|+++|+.|++ .|++|+|+|+.+..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~ 40 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG 40 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCC
Confidence 689999999999999999999 889999999987654
No 212
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.26 E-value=1.7e-06 Score=93.17 Aligned_cols=104 Identities=23% Similarity=0.230 Sum_probs=80.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|++|+++|..|++.|.+|+++++.+.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 180 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------------------------------------ 180 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------------------------------------------
Confidence 36899999999999999999999999999998865310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||+++++++|+++. .+ +|.+.++
T Consensus 181 -------------------------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g----- 219 (367)
T 1xhc_A 181 -------------------------------LDEELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSG----- 219 (367)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTE-----
T ss_pred -------------------------------CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCC-----
Confidence 001355677888899999999999999885 22 4666543
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
. +.+|.||+|+|..++.. +++..++..
T Consensus 220 ---~-i~~D~vi~a~G~~p~~~--ll~~~gl~~ 246 (367)
T 1xhc_A 220 ---F-IEGKVKICAIGIVPNVD--LARRSGIHT 246 (367)
T ss_dssp ---E-EECSCEEEECCEEECCH--HHHHTTCCB
T ss_pred ---E-EEcCEEEECcCCCcCHH--HHHhCCCCC
Confidence 4 89999999999887642 455566543
No 213
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.25 E-value=9.6e-07 Score=99.00 Aligned_cols=31 Identities=29% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEE
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE-LGADVTLIE 249 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~-~g~~v~l~e 249 (704)
.+||+|||||++|++||+.|++ .|++|+|+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 4799999999999999999999 999999999
No 214
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.25 E-value=2e-06 Score=96.60 Aligned_cols=36 Identities=33% Similarity=0.602 Sum_probs=33.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc---CCcEEEEEeCccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL---GADVTLIERGQAVEQ 256 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~---g~~v~l~e~~~~~~~ 256 (704)
+||+|||||++|++||+.|++. |++|+|+|+.+ +|+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG 41 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGG 41 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCC
Confidence 6899999999999999999999 99999999987 554
No 215
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.24 E-value=3.6e-06 Score=96.45 Aligned_cols=109 Identities=25% Similarity=0.334 Sum_probs=83.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 225 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------------------------------------- 225 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc----------------------------------------
Confidence 3579999999999999999999999999999987653100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++.||+++++++|+++..+++ +|.+.++
T Consensus 226 --------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g---- 266 (588)
T 3ics_A 226 --------------------------------IDYEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSG---- 266 (588)
T ss_dssp --------------------------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTS----
T ss_pred --------------------------------CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCC----
Confidence 0013567778888999999999999999865444 4666654
Q ss_pred CCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 378 QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.++.+|.||+|+|..++. .+++..|+.+
T Consensus 267 ----~~i~~D~Vi~a~G~~p~~--~~l~~~g~~~ 294 (588)
T 3ics_A 267 ----SVIQTDMLILAIGVQPES--SLAKGAGLAL 294 (588)
T ss_dssp ----CEEECSEEEECSCEEECC--HHHHHTTCCB
T ss_pred ----CEEEcCEEEEccCCCCCh--HHHHhcCceE
Confidence 378999999999988764 2355566554
No 216
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.24 E-value=2.9e-06 Score=95.17 Aligned_cols=103 Identities=22% Similarity=0.214 Sum_probs=78.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
+++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 212 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL----------------------------------------- 212 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------------------------------------
Confidence 679999999999999999999999999999998754200
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++. ++++++++|+++..+++.+. +.+.+.++
T Consensus 213 -------------------------------~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~-v~~~~~~G--- 256 (492)
T 3ic9_A 213 -------------------------------QDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVE-VIYFDKSG--- 256 (492)
T ss_dssp -------------------------------CCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEE-EEEECTTC---
T ss_pred -------------------------------CCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEE-EEEEeCCC---
Confidence 0013556677777777 99999999999988776554 55542111
Q ss_pred CceeEEecCeEEEcCCCChHH
Q 005273 379 SDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+...+.+|.||+|+|..++.
T Consensus 257 -~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 257 -QKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp -CEEEEEESEEEECSCCEESC
T ss_pred -ceEEEECCEEEEeeCCccCC
Confidence 12579999999999987753
No 217
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.24 E-value=6.5e-06 Score=96.99 Aligned_cols=40 Identities=33% Similarity=0.595 Sum_probs=37.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
..+||+|||||++|++||+.|++.|++|+|+|+.+.+|++
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 3579999999999999999999999999999999888874
No 218
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=2.1e-06 Score=96.49 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.+||+|||||++|++||..|++.|++|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3799999999999999999999999999999984
No 219
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.24 E-value=1.3e-06 Score=98.16 Aligned_cols=31 Identities=29% Similarity=0.478 Sum_probs=29.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEE
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE-LGADVTLIE 249 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~-~g~~v~l~e 249 (704)
.+||+|||||++|++||+.|++ .|++|+|+|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 4799999999999999999999 999999999
No 220
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.24 E-value=3.7e-06 Score=87.61 Aligned_cols=98 Identities=26% Similarity=0.467 Sum_probs=75.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------------- 180 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------------- 180 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-------------------------------------------
Confidence 5789999999999999999999999999998875420
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
.+ ..+.+.+++ .|++++++++|+++..+++++.+|++.+..+
T Consensus 181 -----------------------------~~------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~-- 223 (310)
T 1fl2_A 181 -----------------------------AD------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS-- 223 (310)
T ss_dssp -----------------------------SC------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTT--
T ss_pred -----------------------------cc------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCC--
Confidence 00 123345566 6999999999999987767787888875321
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 224 -g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 224 -GDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp -CCEEEEECSEEEECSCEEE
T ss_pred -CcEEEEEcCEEEEeeCCcc
Confidence 1235789999999998654
No 221
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.24 E-value=2.3e-06 Score=96.12 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCEEEeCeEEEEEEEeCC-------EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 333 PLLRNFRQHLQRLGVTIKFGTRVDDLLIENA-------RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 333 ~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g-------~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
++.++|+..+++.+..++++++|+++...+. ..+-|++.++.. ++..++.|+.||+|+|..+
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~---g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET---GEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT---CCEEEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC---ceEEEEEeCEEEECcCCCC
Confidence 4677777777777888999999999986542 245677766532 2346799999999999754
No 222
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.22 E-value=2.5e-06 Score=96.92 Aligned_cols=52 Identities=25% Similarity=0.380 Sum_probs=41.6
Q ss_pred HHCCCEEEeCeEEEEEEEeC-CEEEEEEEcCCCCCCCCceeEEecC-eEEEcCCCCh
Q 005273 343 QRLGVTIKFGTRVDDLLIEN-ARIVGVKVSDSKDNSQSDIQKLGFD-AVILAVGHSA 397 (704)
Q Consensus 343 ~~~Gv~i~~~t~V~~i~~~~-g~v~GV~~~~~~~~~~~~~~~i~Ad-~VVlAtG~~s 397 (704)
++.|++|++++.|++|+.++ ++++||.+.+... ++..++.|+ .||+|+|++.
T Consensus 220 ~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~---g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 220 EQENFTLLTGLRARQLVFDADRRCTGVDIVDSAF---GHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp TCTTEEEECSCEEEEEEECTTSBEEEEEEESSTT---SCEEEEEEEEEEEECSHHHH
T ss_pred cCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCC---CcEEEEEeCccEEEecCccC
Confidence 35689999999999999987 8899999875310 124578998 9999999853
No 223
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.21 E-value=7.6e-07 Score=98.12 Aligned_cols=34 Identities=32% Similarity=0.483 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~ 253 (704)
++|||||||+||++||..|++.+ ++|+|+|+.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 57999999999999999999866 78999999865
No 224
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.20 E-value=1.5e-06 Score=94.22 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=30.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~ 252 (704)
.+||+|||||++|++||..|++.| .+|+|+|+..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 479999999999999999999999 4689999874
No 225
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.20 E-value=2e-06 Score=94.06 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=32.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCc--EEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGAD--VTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~--v~l~e~~~~~ 254 (704)
.++|+|||||++|++||..|++.|++ |+|+|+.+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 57999999999999999999999984 9999998653
No 226
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.19 E-value=4.6e-06 Score=93.50 Aligned_cols=101 Identities=20% Similarity=0.248 Sum_probs=77.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH----cCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhh
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE----LGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTR 294 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~----~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~ 294 (704)
.++|+|||+|+.|+++|..|++ .|.+|+++++.+....+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~------------------------------------ 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI------------------------------------ 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc------------------------------------
Confidence 5789999999999999999887 478899998764321000
Q ss_pred hccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCC
Q 005273 295 IGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSK 374 (704)
Q Consensus 295 ~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~ 374 (704)
. ...+...+.+.+++.||++++++.|+++..+++.+ .|++.++
T Consensus 224 -------------------l----------------~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~-~v~l~dG- 266 (493)
T 1m6i_A 224 -------------------L----------------PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKL-LIKLKDG- 266 (493)
T ss_dssp -------------------S----------------CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEE-EEEETTS-
T ss_pred -------------------C----------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeE-EEEECCC-
Confidence 0 01255667788889999999999999998766654 5777655
Q ss_pred CCCCCceeEEecCeEEEcCCCChHH
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.++.+|.||+|+|..++.
T Consensus 267 -------~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 267 -------RKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp -------CEEEESEEEECCCEEECC
T ss_pred -------CEEECCEEEECCCCCccH
Confidence 379999999999988753
No 227
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.19 E-value=5.2e-06 Score=87.30 Aligned_cols=99 Identities=18% Similarity=0.341 Sum_probs=77.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-----------------------------------------
Confidence 357899999999999999999999999999998764310
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHC-CCEEEeCeEEEEEEEeCCEEEEEEEcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRL-GVTIKFGTRVDDLLIENARIVGVKVSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~-Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~ 376 (704)
...+.+.+.+. ||++++++.|.++..+++++.+|++.+...
T Consensus 211 -------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~- 252 (338)
T 3itj_A 211 -------------------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKK- 252 (338)
T ss_dssp -------------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTT-
T ss_pred -------------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCC-
Confidence 12234455555 999999999999988877788888876321
Q ss_pred CCCceeEEecCeEEEcCCCCh
Q 005273 377 SQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 253 --g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 253 --NEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp --TEEEEEECSEEEECSCEEE
T ss_pred --CceEEEEeCEEEEEeCCCC
Confidence 1235799999999999643
No 228
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.18 E-value=4.4e-06 Score=87.60 Aligned_cols=98 Identities=22% Similarity=0.383 Sum_probs=74.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------ 192 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------ 192 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------
Confidence 47899999999999999999999999999988753210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
...+.+.+++.|++++++++|+++..+++++.+|.+.+..+
T Consensus 193 ------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~--- 233 (319)
T 3cty_A 193 ------------------------------------ENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTT--- 233 (319)
T ss_dssp ------------------------------------CHHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTT---
T ss_pred ------------------------------------CHHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCC---
Confidence 01233455678999999999999987666677888763111
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 234 g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 234 GEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp CCEEEECCSEEEECCCEEE
T ss_pred CceEEEecCEEEEeeCCcc
Confidence 1124789999999998654
No 229
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.17 E-value=2.1e-06 Score=97.25 Aligned_cols=35 Identities=31% Similarity=0.487 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.|||+|||+||+|+.||..+++.|.+|+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 48999999999999999999999999999998653
No 230
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.15 E-value=2.3e-06 Score=94.84 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVE 255 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~ 255 (704)
.+||+|||||++|++||+.|++.|++|+|+|++ ..|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~G 39 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELG 39 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCC
Confidence 479999999999999999999999999999998 444
No 231
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.14 E-value=5e-06 Score=92.46 Aligned_cols=37 Identities=46% Similarity=0.656 Sum_probs=33.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+|||||++|++||+.|++.|++|+|+|++ .+|+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG 40 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGG 40 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCc
Confidence 579999999999999999999999999999998 4543
No 232
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.14 E-value=6.9e-06 Score=90.84 Aligned_cols=111 Identities=23% Similarity=0.318 Sum_probs=81.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|+.|+++|..|++.|.+|+++++.+.+....
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 187 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS--------------------------------------- 187 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh---------------------------------------
Confidence 35799999999999999999999999999999986541100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
....+.+.+.+.+++. +++++++.|.++..++ ++..+.. ++
T Consensus 188 --------------------------------~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~-~g---- 228 (449)
T 3kd9_A 188 --------------------------------FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVT-DA---- 228 (449)
T ss_dssp --------------------------------SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEE-TT----
T ss_pred --------------------------------cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEe-CC----
Confidence 0013556777788888 9999999999986543 4434433 22
Q ss_pred CCceeEEecCeEEEcCCCChHHHHHHHHhCCCccc
Q 005273 378 QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV 412 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~ 412 (704)
.++.+|.||+|+|..++. .+++..|+.+.
T Consensus 229 ----~~i~~D~Vv~a~G~~p~~--~l~~~~gl~~~ 257 (449)
T 3kd9_A 229 ----GEYKAELVILATGIKPNI--ELAKQLGVRIG 257 (449)
T ss_dssp ----EEEECSEEEECSCEEECC--HHHHHTTCCBC
T ss_pred ----CEEECCEEEEeeCCccCH--HHHHhCCccCC
Confidence 479999999999988764 23556666543
No 233
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.14 E-value=6.1e-06 Score=94.53 Aligned_cols=54 Identities=26% Similarity=0.319 Sum_probs=41.8
Q ss_pred HHHHCCCEEEeCeEEEEEEEeC----CEEEEEEEcCCCCCCCCceeEEec-CeEEEcCCCChH
Q 005273 341 HLQRLGVTIKFGTRVDDLLIEN----ARIVGVKVSDSKDNSQSDIQKLGF-DAVILAVGHSAR 398 (704)
Q Consensus 341 ~l~~~Gv~i~~~t~V~~i~~~~----g~v~GV~~~~~~~~~~~~~~~i~A-d~VVlAtG~~s~ 398 (704)
.+++.+++|++++.|++|+.++ ++++||.+.+.++ +..++.| +.||||+|+...
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g----~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKA----VNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETT----EEEEEEEEEEEEECSCTTTH
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCC----cEEEEEecccEEEccCCCCC
Confidence 3445689999999999999874 4899999874221 2457889 899999999753
No 234
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.14 E-value=4.1e-06 Score=94.95 Aligned_cols=55 Identities=18% Similarity=0.243 Sum_probs=41.7
Q ss_pred HHHHHHCCCEEEeCeEEEEEEEeCC---EEEEEEEcCCCCCCCCceeEE---ecCeEEEcCCCCh
Q 005273 339 RQHLQRLGVTIKFGTRVDDLLIENA---RIVGVKVSDSKDNSQSDIQKL---GFDAVILAVGHSA 397 (704)
Q Consensus 339 ~~~l~~~Gv~i~~~t~V~~i~~~~g---~v~GV~~~~~~~~~~~~~~~i---~Ad~VVlAtG~~s 397 (704)
...+++.|++|++++.|++|+.+++ +++||++.+..+ +..++ .++.||||+|++.
T Consensus 201 ~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g----~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 201 LNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNG----TPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp GGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTS----CEEEEEEEEEEEEEECCHHHH
T ss_pred hhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCC----ceEEEEeccCCEEEEcCcccC
Confidence 3344567999999999999998763 899999875322 12345 5789999999874
No 235
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.14 E-value=1e-05 Score=91.12 Aligned_cols=49 Identities=24% Similarity=0.365 Sum_probs=41.4
Q ss_pred HCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 344 RLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 344 ~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
+.+.+++.++.|..+..++++++||.+...++ ...+.|+.||||+|+..
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~-----~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQG-----SAEVFADQIVLCAGALE 271 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTE-----EEEEEEEEEEECSHHHH
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCc-----eEEEeecceEEcccccC
Confidence 35789999999999999999999999876533 36788999999999754
No 236
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.14 E-value=1.7e-06 Score=96.28 Aligned_cols=103 Identities=17% Similarity=0.202 Sum_probs=74.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.+++|+|||+|+.|+++|..|++.|.+|+++++.+.+....
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 211 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL--------------------------------------- 211 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC---------------------------------------
Confidence 35789999999999999999999999999999886531100
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC-CEEEEEEEcCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN-ARIVGVKVSDSKDN 376 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~-g~v~GV~~~~~~~~ 376 (704)
....+.+.+.+.++ ++++++++|+++..++ +.+. |.+.+.++
T Consensus 212 --------------------------------~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G- 254 (466)
T 3l8k_A 212 --------------------------------EDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYE-VIYSTKDG- 254 (466)
T ss_dssp --------------------------------CCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEE-EEECCTTS-
T ss_pred --------------------------------CCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEE-EEEEecCC-
Confidence 00124444544443 9999999999998766 6553 66652111
Q ss_pred CCCceeEEecCeEEEcCCCChHH
Q 005273 377 SQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 377 ~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..++.+|.||+|+|..++.
T Consensus 255 ---~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 255 ---SKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp ---CCEEEEESCEEECCCEEECC
T ss_pred ---ceEEEEcCEEEECcCCCccc
Confidence 12479999999999987764
No 237
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=7e-06 Score=87.64 Aligned_cols=102 Identities=21% Similarity=0.284 Sum_probs=79.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~----------------------------------------- 201 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH----------------------------------------- 201 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-----------------------------------------
Confidence 578999999999999999999999999999987543100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
..+.+.+.+.+++.|++++++++|+++..+++++.+|.+...++
T Consensus 202 ---------------------------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g--- 245 (360)
T 3ab1_A 202 ---------------------------------GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDG--- 245 (360)
T ss_dssp ---------------------------------SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTC---
T ss_pred ---------------------------------HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCC---
Confidence 01334455667788999999999999988888888888762111
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+...+.+|.||+|+|..++
T Consensus 246 -~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 246 -SKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp -CEEEEECSEEEECCCBCCS
T ss_pred -CeEEEeCCEEEECCCCCCC
Confidence 1257899999999997664
No 238
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.12 E-value=1.2e-05 Score=83.64 Aligned_cols=98 Identities=17% Similarity=0.266 Sum_probs=73.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 180 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------------------------------------------ 180 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC------------------------------------------
Confidence 47999999999999999999999999999988754210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHH-HCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQ-RLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~-~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
+ ..+.+.+. +.||++++++.+.++..+++++.+|.+.+..+
T Consensus 181 ------------------------------~------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~-- 222 (311)
T 2q0l_A 181 ------------------------------A------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTAT-- 222 (311)
T ss_dssp ------------------------------C------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTT--
T ss_pred ------------------------------C------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCC--
Confidence 0 11233444 36999999999999987767777788763111
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
++..++.+|.||+|+|..+
T Consensus 223 -g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 223 -NEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp -CCEEEEECSEEEECSCEEE
T ss_pred -CceEEEecCEEEEEecCcc
Confidence 1224789999999999643
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.11 E-value=1.1e-05 Score=85.00 Aligned_cols=102 Identities=19% Similarity=0.221 Sum_probs=77.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|..|+++|..|++.|.+|+++++.+.+..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------ 189 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------ 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc------------------------------------------
Confidence 57899999999999999999999999999998754310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
. ....+.+.+.+++.||++++++.|.++.. ++++.+|.+.+..+
T Consensus 190 -----------------------------~---~~~~~~l~~~l~~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~--- 233 (335)
T 2zbw_A 190 -----------------------------H---EASVKELMKAHEEGRLEVLTPYELRRVEG-DERVRWAVVFHNQT--- 233 (335)
T ss_dssp -----------------------------C---HHHHHHHHHHHHTTSSEEETTEEEEEEEE-SSSEEEEEEEETTT---
T ss_pred -----------------------------c---HHHHHHHHhccccCCeEEecCCcceeEcc-CCCeeEEEEEECCC---
Confidence 0 02345566777888999999999999976 56666777762100
Q ss_pred CceeEEecCeEEEcCCCChH
Q 005273 379 SDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~ 398 (704)
++..++.+|.||+|+|..++
T Consensus 234 g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 234 QEELALEVDAVLILAGYITK 253 (335)
T ss_dssp CCEEEEECSEEEECCCEEEE
T ss_pred CceEEEecCEEEEeecCCCC
Confidence 11257899999999997653
No 240
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.09 E-value=2.1e-05 Score=90.32 Aligned_cols=35 Identities=29% Similarity=0.440 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
...+||+||||||||++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34689999999999999999999999999999984
No 241
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.07 E-value=1.7e-05 Score=82.46 Aligned_cols=98 Identities=23% Similarity=0.352 Sum_probs=75.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 184 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------ 184 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------------------------------
Confidence 57899999999999999999999999999988754310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
. ..+ +.+.+++.||+++++++|.++..+++++.+|++...++
T Consensus 185 ------------------------------~--~~~---~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g--- 226 (315)
T 3r9u_A 185 ------------------------------A--PST---VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDG--- 226 (315)
T ss_dssp ------------------------------C--HHH---HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTS---
T ss_pred ------------------------------C--HHH---HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCC---
Confidence 0 011 22333578999999999999988888888888872211
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
+..++.+|.||+|+|..+
T Consensus 227 -~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 227 -SIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp -CEEEECCSCEEECSCEEE
T ss_pred -CeEEeecCeEEEEEcCCC
Confidence 234799999999999643
No 242
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.04 E-value=1.6e-05 Score=88.51 Aligned_cols=40 Identities=38% Similarity=0.556 Sum_probs=36.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~~~~~ 258 (704)
.++|+|||+|++|+.+|+.|++.|+ +|+|+|+.+.+|++.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 5799999999999999999999999 899999998888754
No 243
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.04 E-value=1.4e-06 Score=96.84 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-c------CCcEEEEEeCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAE-L------GADVTLIERGQAVE 255 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~-~------g~~v~l~e~~~~~~ 255 (704)
.++|+||||||+|++||..|++ . |++|+|||+.+.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 4689999999999999999999 7 99999999987654
No 244
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.04 E-value=9.1e-07 Score=98.39 Aligned_cols=37 Identities=30% Similarity=0.548 Sum_probs=34.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCcccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQAVE 255 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~~~ 255 (704)
.++|+|||+|++|++||..|++.| ++|+|||+.+.++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 579999999999999999999998 9999999987653
No 245
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.02 E-value=5e-05 Score=85.63 Aligned_cols=103 Identities=21% Similarity=0.252 Sum_probs=73.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++++|||+|+.|+++|..|++.|.+|+|+++......
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~------------------------------------------ 247 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG------------------------------------------ 247 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc------------------------------------------
Confidence 46799999999999999999999999999998532100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC----CEEEEEEEcCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN----ARIVGVKVSDSK 374 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~----g~v~GV~~~~~~ 374 (704)
....+.+.+.+.+++.||++++++.++++...+ +.+ .+.+...+
T Consensus 248 -------------------------------~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~~~ 295 (519)
T 3qfa_A 248 -------------------------------FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQSTN 295 (519)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEESS
T ss_pred -------------------------------CCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEECC
Confidence 001356677788899999999999888876532 332 23333221
Q ss_pred CCCCCceeEEecCeEEEcCCCChH
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+. +...+.+|.||+|+|..++
T Consensus 296 g~---~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 296 SE---EIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp SS---CEEEEEESEEEECSCEEES
T ss_pred Cc---EEEEEECCEEEEecCCccc
Confidence 11 1246789999999998664
No 246
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.01 E-value=6.7e-06 Score=89.31 Aligned_cols=48 Identities=25% Similarity=0.217 Sum_probs=36.1
Q ss_pred eccCCCCCccccCcCCeeEccccchhhH---HHHHHHHHHHHHHHHHHhhc
Q 005273 635 QIPRNNETCESTSLKGLYPVGEGAGYAG---GIVSAAADGMYAGFAVAKDF 682 (704)
Q Consensus 635 ~i~~~~~tles~~i~GLy~~GE~aG~~G---Gi~sA~~~G~~Aa~~i~~~~ 682 (704)
.|.+|+.||++++.||+|++||+++... -...|...|..+|+.|...+
T Consensus 273 ~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 273 WCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp SBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 3556777899999999999999964321 13466677889999888665
No 247
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.01 E-value=1.5e-05 Score=83.79 Aligned_cols=99 Identities=23% Similarity=0.422 Sum_probs=73.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|..|+++|..|++.|.+|+++++.+.+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------------------------------------- 196 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------------------------------------- 196 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------------------------------
Confidence 357899999999999999999999999999998754210
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHH-HHHHHCCCEEEeCeEEEEEEEeCC--EEEEEEEcCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFR-QHLQRLGVTIKFGTRVDDLLIENA--RIVGVKVSDSK 374 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~-~~l~~~Gv~i~~~t~V~~i~~~~g--~v~GV~~~~~~ 374 (704)
...+. +.+++.||+++++++|.++..+++ ++.+|.+.+..
T Consensus 197 -------------------------------------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~ 239 (333)
T 1vdc_A 197 -------------------------------------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVV 239 (333)
T ss_dssp -------------------------------------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETT
T ss_pred -------------------------------------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecC
Confidence 01122 223567999999999999987654 67778776421
Q ss_pred CCCCCceeEEecCeEEEcCCCCh
Q 005273 375 DNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 375 ~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
+ ++..++.+|.||+|+|..+
T Consensus 240 ~---g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 240 T---GDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp T---CCEEEEECSEEEECSCEEE
T ss_pred C---CceEEEecCEEEEEeCCcc
Confidence 1 1235799999999999654
No 248
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.99 E-value=8.7e-07 Score=96.21 Aligned_cols=111 Identities=20% Similarity=0.226 Sum_probs=80.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+|+.+.+..+.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 185 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQ---------------------------------------- 185 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh----------------------------------------
Confidence 4789999999999999999999999999999987542100
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
....+.+.+.+.+++.||++++++.|+++ +
T Consensus 186 -------------------------------~~~~~~~~~~~~l~~~gV~~~~~~~v~~i----g--------------- 215 (385)
T 3klj_A 186 -------------------------------LDRDGGLFLKDKLDRLGIKIYTNSNFEEM----G--------------- 215 (385)
T ss_dssp -------------------------------SCHHHHHHHHHHHHTTTCEEECSCCGGGC----H---------------
T ss_pred -------------------------------cCHHHHHHHHHHHHhCCCEEEeCCEEEEc----C---------------
Confidence 00135566777888899999999988766 1
Q ss_pred CceeEEecCeEEEcCCCChHHHHHHHHhCCCcc-------------cccceeeEEEEec
Q 005273 379 SDIQKLGFDAVILAVGHSARDIYEMLVSHNINL-------------VPKDFAVGLRMEH 424 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l-------------~~~~~avG~~~~~ 424 (704)
.++.+|.||+|+|..++. .+++..++.. .+..|++|+....
T Consensus 216 ---~~~~~D~vv~a~G~~p~~--~~~~~~gl~~~~gi~vd~~~~t~~~~IyA~GD~a~~ 269 (385)
T 3klj_A 216 ---DLIRSSCVITAVGVKPNL--DFIKDTEIASKRGILVNDHMETSIKDIYACGDVAEF 269 (385)
T ss_dssp ---HHHHHSEEEECCCEEECC--GGGTTSCCCBSSSEEECTTCBCSSTTEEECGGGEEE
T ss_pred ---eEEecCeEEECcCcccCh--hhhhhcCCCcCCCEEECCCcccCCCCEEEEEeeEec
Confidence 257899999999987653 2344444432 2446677765553
No 249
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.99 E-value=1.7e-05 Score=83.21 Aligned_cols=97 Identities=23% Similarity=0.409 Sum_probs=72.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------------------------------------------ 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------------------------------------------
Confidence 47899999999999999999999999999998754210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
...+.+.+.+ .|++++++++|+++.. ++++.+|.+.+..+
T Consensus 190 ------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~v~~v~~~~~~~-- 230 (325)
T 2q7v_A 190 ------------------------------------NKVAQARAFANPKMKFIWDTAVEEIQG-ADSVSGVKLRNLKT-- 230 (325)
T ss_dssp ------------------------------------CHHHHHHHHTCTTEEEECSEEEEEEEE-SSSEEEEEEEETTT--
T ss_pred ------------------------------------chHHHHHHHhcCCceEecCCceEEEcc-CCcEEEEEEEECCC--
Confidence 0112234443 5999999999999976 46677888763111
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
++..++.+|.||+|+|..+
T Consensus 231 -g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 231 -GEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp -CCEEEEECSEEEECSCEEE
T ss_pred -CcEEEEEcCEEEEccCCCC
Confidence 1224789999999999665
No 250
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.98 E-value=3.3e-05 Score=80.36 Aligned_cols=109 Identities=22% Similarity=0.375 Sum_probs=79.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------ 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc------------------------------------------
Confidence 57899999999999999999999999999998764310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
+ ..+.+.+.+ .||++++++.|.++..+ +++.+|++.+..+
T Consensus 192 ------------------------------~------~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~-- 232 (323)
T 3f8d_A 192 ------------------------------Q------PIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKT-- 232 (323)
T ss_dssp ------------------------------C------HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTT--
T ss_pred ------------------------------C------HHHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCC--
Confidence 0 012233444 49999999999999765 5677788876211
Q ss_pred CCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 378 QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
++...+.+|.||+|+|..+.. .++...++.+
T Consensus 233 -g~~~~~~~D~vv~a~G~~p~~--~~~~~~g~~~ 263 (323)
T 3f8d_A 233 -GEIKELNVNGVFIEIGFDPPT--DFAKSNGIET 263 (323)
T ss_dssp -CCEEEEECSEEEECCCEECCH--HHHHHTTCCB
T ss_pred -CceEEEEcCEEEEEECCCCCh--hHHhhcCeee
Confidence 123478999999999987753 3455555544
No 251
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.97 E-value=1.2e-06 Score=98.14 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=33.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQ 256 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~ 256 (704)
.+||+||||||+|+.||..|++.|++|+|+|++. +|+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCC
Confidence 4799999999999999999999999999999975 554
No 252
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.96 E-value=3.8e-06 Score=94.17 Aligned_cols=37 Identities=19% Similarity=0.382 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
..++|+|||||+||++||..|++. |++|+|+|+.+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 357999999999999999999887 8899999998754
No 253
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.96 E-value=2e-05 Score=88.91 Aligned_cols=98 Identities=24% Similarity=0.458 Sum_probs=76.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|..|+++|..|++.|.+|+++++.+.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~------------------------------------------- 391 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------------- 391 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-------------------------------------------
Confidence 5799999999999999999999999999998875431
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHH-CCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQR-LGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~-~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
.+ ..+.+.+++ .||++++++.++++..+++++.+|.+.+...
T Consensus 392 -----------------------------~~------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~-- 434 (521)
T 1hyu_A 392 -----------------------------AD------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS-- 434 (521)
T ss_dssp -----------------------------SC------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTT--
T ss_pred -----------------------------cC------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCC--
Confidence 00 123445656 5999999999999987777888888875321
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 435 -g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 435 -GDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp -CCEEEEECSEEEECCCEEE
T ss_pred -CceEEEEcCEEEECcCCCC
Confidence 1235789999999999654
No 254
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.93 E-value=6.2e-07 Score=97.95 Aligned_cols=115 Identities=12% Similarity=0.046 Sum_probs=85.9
Q ss_pred eeEee--ccCCC--CCCcchhHHHHHHhhh-cccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHc--CC
Q 005273 39 AIRCA--KRTGK--QRYPSEKKKLKQKHKQ-VLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVL--QF 111 (704)
Q Consensus 39 ~~~~~--~~~~~--~~~~~~~~~~~~~~~~-~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~--~i 111 (704)
++|.+ +...+ +-...|...+.++.++ +++|++|++.|.+.......+. .+ .+++.++++.||+.+ ++
T Consensus 246 ~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~--~g----~~~~~~~a~~Ik~~v~~~i 319 (419)
T 3l5a_A 246 GFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRT--PG----DHFGRPVNQIVYEHLAGRI 319 (419)
T ss_dssp EEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCC--SS----TTTTSBHHHHHHHHHTTSS
T ss_pred EEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCC--CC----ccccHHHHHHHHHHcCCCC
Confidence 56644 44444 5678899999999998 9999999999864211111111 11 133456899999999 69
Q ss_pred CCCC---CC-hhhHHHHHhcccc----cccccCCCeEEEEEEEeeccccccCCchhhhhhccc
Q 005273 112 PVAS---ML-PAEAFTVVRKSFD----ARKVLKEPKFVYTVDMDVSKLLDLEPRTWDFISRLE 166 (704)
Q Consensus 112 pv~~---~~-p~~a~~i~~~~~D----aR~~ladp~~~~kv~~~~~~~~~~~~~~~~~i~~~~ 166 (704)
||+. |. |+.|+++++. +| +|..|+||+|+.|+..+..++ |+.|++|..
T Consensus 320 PVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~IanPdlv~ki~~G~~~~------I~~ci~~~~ 375 (419)
T 3l5a_A 320 PLIASGGINSPESALDALQH-ADMVGMSSPFVTEPDFVHKLAEQRPHD------INLEFSMAD 375 (419)
T ss_dssp CEEECSSCCSHHHHHHHGGG-CSEEEESTHHHHCTTHHHHHHTTCGGG------CCCCCCGGG
T ss_pred eEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHHCcHHHHHHHcCCccc------ceecCCHHH
Confidence 9863 54 9999999988 99 999999999999999998754 788888764
No 255
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.92 E-value=3.1e-05 Score=86.90 Aligned_cols=102 Identities=25% Similarity=0.334 Sum_probs=72.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEEeCccccccccchhHHHHHHhhccccccccccCCccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG--------------ADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGT 285 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g--------------~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~ 285 (704)
..++|||||+.|+++|..|++.+ .+|+|+|..+.+...
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~---------------------------- 269 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM---------------------------- 269 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT----------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC----------------------------
Confidence 46999999999999999887643 579999888754210
Q ss_pred ccCcchhhhhccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEE
Q 005273 286 WSDGKLVTRIGRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARI 365 (704)
Q Consensus 286 ~sdg~l~~~~~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v 365 (704)
-...+.+.+.+.+++.||+++++++|+++. ++.+
T Consensus 270 --------------------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~ 303 (502)
T 4g6h_A 270 --------------------------------------------FEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQL 303 (502)
T ss_dssp --------------------------------------------SCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEE
T ss_pred --------------------------------------------CCHHHHHHHHHHHHhcceeeecCceEEEEe--CCce
Confidence 001366778889999999999999999874 3332
Q ss_pred -EEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 366 -VGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 366 -~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
..+...++.. ..+++.+|.||+|+|..++.
T Consensus 304 ~~~~~~~dg~~----~~~~i~ad~viwa~Gv~~~~ 334 (502)
T 4g6h_A 304 LAKTKHEDGKI----TEETIPYGTLIWATGNKARP 334 (502)
T ss_dssp EEEEECTTSCE----EEEEEECSEEEECCCEECCH
T ss_pred EEEEEecCccc----ceeeeccCEEEEccCCcCCH
Confidence 2233333321 12479999999999987653
No 256
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.89 E-value=5.3e-06 Score=87.63 Aligned_cols=41 Identities=34% Similarity=0.406 Sum_probs=35.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHH--cCCcEEEEEeCcccccc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAE--LGADVTLIERGQAVEQR 257 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~--~g~~v~l~e~~~~~~~~ 257 (704)
...+||+|||||||||+||+.|++ .|++|+|||+++.+|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 346899999999999999999985 59999999999887753
No 257
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.85 E-value=3.6e-05 Score=80.54 Aligned_cols=97 Identities=22% Similarity=0.320 Sum_probs=73.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------ 191 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------------------------ 191 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS------------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc------------------------------------------
Confidence 57899999999999999999999999999988754310
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
. ....+.+++.||+++++++|.++..+++ +.+|.+.+..+
T Consensus 192 -----------------------------~-------~~~~~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~--- 231 (332)
T 3lzw_A 192 -----------------------------H-------EHSVENLHASKVNVLTPFVPAELIGEDK-IEQLVLEEVKG--- 231 (332)
T ss_dssp -----------------------------C-------HHHHHHHHHSSCEEETTEEEEEEECSSS-CCEEEEEETTS---
T ss_pred -----------------------------c-------HHHHHHHhcCCeEEEeCceeeEEecCCc-eEEEEEEecCC---
Confidence 0 0112346789999999999999976554 56677766322
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
++..++.+|.||+|+|..+
T Consensus 232 g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 232 DRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp CCEEEEECSEEEECCCEEC
T ss_pred CceEEEECCEEEEeeccCC
Confidence 1235799999999999654
No 258
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.83 E-value=6e-05 Score=80.32 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=73.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|..|+++|..|++.|.+|+++++.+.+.... .+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~-----------~d~-------------------------- 208 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD-----------ADP-------------------------- 208 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---------------------C--------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC-----------CCC--------------------------
Confidence 4689999999999999999999999999999876431000 000
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCC-CEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLG-VTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~G-v~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
. ......+.+.+.+.+++.| +++++++.|.++..+++. ..|.+.++.
T Consensus 209 --------------~--------------~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~-~~v~~~~g~--- 256 (369)
T 3d1c_A 209 --------------S--------------VRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ-YHISFDSGQ--- 256 (369)
T ss_dssp --------------T--------------TSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE-EEEEESSSC---
T ss_pred --------------C--------------ccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc-eEEEecCCe---
Confidence 0 0000124566777778887 999999999998765554 346666542
Q ss_pred CCceeEEecCeEEEcCCCChHH
Q 005273 378 QSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
....+|.||+|+|..++.
T Consensus 257 ----~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 257 ----SVHTPHEPILATGFDATK 274 (369)
T ss_dssp ----CEEESSCCEECCCBCGGG
T ss_pred ----EeccCCceEEeeccCCcc
Confidence 223469999999987753
No 259
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.83 E-value=3.5e-05 Score=93.90 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=74.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.++|+|||||..|+.+|..+++.|. +|+|+++.+... +.
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~--------------~~-------------------------- 371 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN--------------IR-------------------------- 371 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG--------------CC--------------------------
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh--------------CC--------------------------
Confidence 4589999999999999999999997 899999875310 00
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcC----C
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSD----S 373 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~----~ 373 (704)
.. ....+.+++.||++++++.+.++..+++++.+|++.+ .
T Consensus 372 -----------------------------~~-------~~e~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~ 415 (1025)
T 1gte_A 372 -----------------------------AV-------PEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDE 415 (1025)
T ss_dssp -----------------------------SC-------HHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred -----------------------------CC-------HHHHHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcC
Confidence 00 0011356678999999999999987788888887642 1
Q ss_pred CCC---CCCceeEEecCeEEEcCCCCh
Q 005273 374 KDN---SQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 374 ~~~---~~~~~~~i~Ad~VVlAtG~~s 397 (704)
++. .+++..++.+|.||+|+|..+
T Consensus 416 ~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 416 TGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp TSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CCCcccCCCceEEEECCEEEECCCCCC
Confidence 110 011234789999999999854
No 260
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.82 E-value=4.6e-05 Score=85.63 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=44.7
Q ss_pred HHHHHHHHCC-CEEEeCeEEEEEEEeC-C-EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 337 NFRQHLQRLG-VTIKFGTRVDDLLIEN-A-RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 337 ~L~~~l~~~G-v~i~~~t~V~~i~~~~-g-~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.+.+.+++.| ++|++++.|++|+.++ + +++||++.+.++. .+...++.|+.||||+|++...
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~-~~~~~~v~A~~VIlaaG~~~s~ 290 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGK-LLATKEISCRYLFLGAGSLGST 290 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCC-EEEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCc-cceeEEEeeCEEEEccCCCCCH
Confidence 3444555665 9999999999999885 3 8999998743220 0013578999999999998543
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.80 E-value=0.00019 Score=82.28 Aligned_cols=100 Identities=25% Similarity=0.284 Sum_probs=71.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||||..|+++|..|++.|.+|+|+++..... .
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~-~----------------------------------------- 323 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR-G----------------------------------------- 323 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-T-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC-c-----------------------------------------
Confidence 4689999999999999999999999999999872110 0
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe------C---CEEEEEE
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE------N---ARIVGVK 369 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~------~---g~v~GV~ 369 (704)
....+.+.+.+.+++.||++++++.++++... + +++. +.
T Consensus 324 -------------------------------~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~ 371 (598)
T 2x8g_A 324 -------------------------------FDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VK 371 (598)
T ss_dssp -------------------------------SCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EE
T ss_pred -------------------------------CCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EE
Confidence 00124556677888899999999988887542 2 3332 22
Q ss_pred --EcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 370 --VSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 370 --~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..++ +...+.+|.||+|+|..++
T Consensus 372 ~~~~~g------~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 372 GHYTDG------KKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp EEETTS------CEEEEEESEEEECSCEEEC
T ss_pred EEeCCC------cEEeccCCEEEEEeCCccc
Confidence 2232 1234569999999998764
No 262
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.79 E-value=2.7e-05 Score=86.39 Aligned_cols=118 Identities=19% Similarity=0.272 Sum_probs=77.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGAD-VTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~-v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
...++|+|||||..|+.+|..+.+.|.+ |+++++.+...
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~---------------------------------------- 301 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN---------------------------------------- 301 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT----------------------------------------
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC----------------------------------------
Confidence 3468999999999999999999999984 99998875420
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcC---
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSD--- 372 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~--- 372 (704)
.+ .. .. ..+.+++.||++++++.+.++.. ++++.+|++..
T Consensus 302 ------------------~p-----------~~--~~-----e~~~~~~~Gv~~~~~~~~~~i~~-~g~v~~v~~~~~~~ 344 (456)
T 2vdc_G 302 ------------------MP-----------GS--QR-----EVAHAEEEGVEFIWQAAPEGFTG-DTVVTGVRAVRIHL 344 (456)
T ss_dssp ------------------CS-----------SC--HH-----HHHHHHHTTCEEECCSSSCCEEE-EEEEETTEEEEEEE
T ss_pred ------------------CC-----------CC--HH-----HHHHHHHCCCEEEeCCCceEEeC-CCcEEEEEEEEEEe
Confidence 00 00 00 12356678999999999888864 45665555431
Q ss_pred ----CCCCC-----CCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 373 ----SKDNS-----QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 373 ----~~~~~-----~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.++.. +++..++.+|.||+|+|..++....++...++.+
T Consensus 345 ~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~ 392 (456)
T 2vdc_G 345 GVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKV 392 (456)
T ss_dssp EEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCB
T ss_pred cccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeE
Confidence 10000 1223579999999999986643222445555544
No 263
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.77 E-value=6.1e-05 Score=84.69 Aligned_cols=61 Identities=18% Similarity=0.175 Sum_probs=44.0
Q ss_pred HHHHHHHHC-CCEEEeCeEEEEEEEeC-C-EEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 337 NFRQHLQRL-GVTIKFGTRVDDLLIEN-A-RIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 337 ~L~~~l~~~-Gv~i~~~t~V~~i~~~~-g-~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+...+++. +++|++++.|++|+.++ + +++||++.+.++. .+...++.|+.||||+|++..
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~-~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGN-VVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSC-EEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCc-ccccEEEEeCEEEEccCccCC
Confidence 334444555 59999999999999986 4 7999998752220 001357899999999999854
No 264
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.76 E-value=2.8e-05 Score=82.11 Aligned_cols=98 Identities=21% Similarity=0.359 Sum_probs=70.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+++++.+.+..
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~------------------------------------------ 192 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA------------------------------------------ 192 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc------------------------------------------
Confidence 57899999999999999999999999999988754210
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
.. .+.+ +.+++.||+++++++|.++..++ ++.+|.+.+..+
T Consensus 193 -----------------------------~~---~~~~---~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~--- 233 (335)
T 2a87_A 193 -----------------------------SK---IMLD---RARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDTNT--- 233 (335)
T ss_dssp -----------------------------CT---THHH---HHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEETT---
T ss_pred -----------------------------cH---HHHH---HHhccCCcEEEeCceeEEEecCC-cEeEEEEEEcCC---
Confidence 00 0111 22346899999999999987543 455566653110
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 234 g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 234 GAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp SCCEEECCSCEEECSCEEE
T ss_pred CceEEeecCEEEEccCCcc
Confidence 1125799999999999765
No 265
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.75 E-value=8.2e-05 Score=77.37 Aligned_cols=100 Identities=20% Similarity=0.347 Sum_probs=72.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
..++|+|||+|..|+++|..|++.|.+|+|+++......
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~----------------------------------------- 189 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA----------------------------------------- 189 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc-----------------------------------------
Confidence 357899999999999999999999999999998654210
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
......+.....+++.+..+.+.++...++...++.+.+...
T Consensus 190 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-- 231 (314)
T 4a5l_A 190 ------------------------------------SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVS-- 231 (314)
T ss_dssp ------------------------------------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTT--
T ss_pred ------------------------------------cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccc--
Confidence 001112233445788888998888887777777777654322
Q ss_pred CCceeEEecCeEEEcCCCCh
Q 005273 378 QSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s 397 (704)
++...+.+|.||+|+|..+
T Consensus 232 -~~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 232 -GEYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp -CCEEEEECSEEEECSCEEE
T ss_pred -ccceeeccccceEeccccc
Confidence 1246899999999999643
No 266
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.75 E-value=0.00025 Score=78.36 Aligned_cols=37 Identities=30% Similarity=0.458 Sum_probs=33.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQAV 254 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~~ 254 (704)
..++|+|||+|..|+++|..|++. |.+|+++++.+.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 367999999999999999999998 8999999998754
No 267
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.64 E-value=5.1e-05 Score=85.19 Aligned_cols=36 Identities=19% Similarity=0.248 Sum_probs=32.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+++|||||||+||+++|..|++.+++|+|+|+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 356899999999999999999999999999999864
No 268
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.64 E-value=3.9e-05 Score=83.74 Aligned_cols=41 Identities=34% Similarity=0.690 Sum_probs=37.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCccccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELG-ADVTLIERGQAVEQRG 258 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~~~~~~~ 258 (704)
..+||+|||||++||+||+.|++.| ++|+|+|+.+.+|++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 3579999999999999999999999 9999999999888753
No 269
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.63 E-value=5.9e-05 Score=77.56 Aligned_cols=86 Identities=17% Similarity=0.312 Sum_probs=66.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.| +|+++++.+..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~-------------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE-------------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------------------------------------
Confidence 579999999999999999999999 99999766420
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQ 378 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~ 378 (704)
+...+.+.+++.||+++. ++|.++..+ . .|.+.++
T Consensus 176 -----------------------------------~~~~~~~~l~~~gv~i~~-~~v~~i~~~--~--~v~~~~g----- 210 (297)
T 3fbs_A 176 -----------------------------------PDADQHALLAARGVRVET-TRIREIAGH--A--DVVLADG----- 210 (297)
T ss_dssp -----------------------------------CCHHHHHHHHHTTCEEEC-SCEEEEETT--E--EEEETTS-----
T ss_pred -----------------------------------CCHHHHHHHHHCCcEEEc-ceeeeeecC--C--eEEeCCC-----
Confidence 112345677789999995 888887532 2 5677665
Q ss_pred CceeEEecCeEEEcCCCCh
Q 005273 379 SDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 379 ~~~~~i~Ad~VVlAtG~~s 397 (704)
.++.+|.||+|+|..+
T Consensus 211 ---~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 211 ---RSIALAGLFTQPKLRI 226 (297)
T ss_dssp ---CEEEESEEEECCEEEC
T ss_pred ---CEEEEEEEEEccCccc
Confidence 3689999999998543
No 270
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.60 E-value=4.2e-05 Score=82.43 Aligned_cols=42 Identities=33% Similarity=0.497 Sum_probs=38.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC-ccccccc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERG-QAVEQRG 258 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~-~~~~~~~ 258 (704)
...++|+|||||++||.||+.|++.|++|+|+|+. +.+|++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRI 84 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCce
Confidence 34689999999999999999999999999999999 8888654
No 271
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.57 E-value=0.00013 Score=88.20 Aligned_cols=99 Identities=19% Similarity=0.214 Sum_probs=76.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhccC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGRN 298 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~~ 298 (704)
.++|+|||+|+.|+++|..|++.|.+|+|+++.+.+.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------------- 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------------- 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------------------------------------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------------------------------------------
Confidence 4789999999999999999999999999999875420
Q ss_pred chhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEe-CCEEEEEEEcC--CCC
Q 005273 299 SNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIE-NARIVGVKVSD--SKD 375 (704)
Q Consensus 299 ~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~-~g~v~GV~~~~--~~~ 375 (704)
.. .+.+++.||++++++.|+++..+ ++++.+|++.+ ..+
T Consensus 321 ---------------------------------~~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~ 362 (965)
T 2gag_A 321 ---------------------------------AA-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEAR 362 (965)
T ss_dssp ---------------------------------HH-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTC
T ss_pred ---------------------------------hh-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccC
Confidence 00 34567899999999999999764 57777888765 100
Q ss_pred CCCCceeEEecCeEEEcCCCChHH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.+++..++.+|.||+|+|..++.
T Consensus 363 -~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 363 -ELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp -CEEEEEEEECSEEEEECCEEECC
T ss_pred -CCCceEEEEcCEEEECCCcCcCh
Confidence 00112579999999999987764
No 272
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.52 E-value=7.1e-05 Score=83.61 Aligned_cols=41 Identities=37% Similarity=0.494 Sum_probs=37.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
..++|+|||||++||+||+.|++.|++|+|+|+.+.+|++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 46799999999999999999999999999999999888764
No 273
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.51 E-value=4.4e-05 Score=85.88 Aligned_cols=40 Identities=35% Similarity=0.468 Sum_probs=37.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG-ADVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~~~~~~~ 258 (704)
.++|+|||||++||+||+.|++.| ++|+|+|+.+.+|++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 469999999999999999999999 9999999999999864
No 274
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.50 E-value=6.5e-05 Score=81.71 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=37.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCcccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQAVEQRGR 259 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~~~~~~~~ 259 (704)
.+||+|||||++||.||+.|++. |++|+|+|+.+.+|++..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 57999999999999999999999 999999999999887643
No 275
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.45 E-value=6.1e-05 Score=89.43 Aligned_cols=42 Identities=40% Similarity=0.581 Sum_probs=38.3
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 216 RTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 216 ~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
....++|+|||+|++||+||+.|+++|++|+|||+.+.+|++
T Consensus 275 ~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 275 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 345689999999999999999999999999999999988764
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.42 E-value=0.00068 Score=70.51 Aligned_cols=36 Identities=25% Similarity=0.509 Sum_probs=33.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
+++|+|||||+.|+++|..|++.|.+|+|+++.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 478999999999999999999999999999988653
No 277
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.41 E-value=0.0001 Score=80.04 Aligned_cols=41 Identities=22% Similarity=0.321 Sum_probs=37.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
..+||+|||||++|++||+.|++.|++|+|+|+.+.+|++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 45799999999999999999999999999999998887653
No 278
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.41 E-value=7.9e-05 Score=82.03 Aligned_cols=40 Identities=43% Similarity=0.618 Sum_probs=37.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
.+||+|||||++||+||+.|++.|++|+|+|+.+.+|++.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 4689999999999999999999999999999999888764
No 279
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.40 E-value=5.3e-05 Score=80.52 Aligned_cols=101 Identities=13% Similarity=0.202 Sum_probs=78.3
Q ss_pred eeEee--ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC-
Q 005273 39 AIRCA--KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS- 115 (704)
Q Consensus 39 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~- 115 (704)
.+|.. +-..++-+..+...+.++.+++|+|++|++.|.+.... .+ . ..+++.++++.||+.+++||+.
T Consensus 213 ~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~--~~--~-----~~~~~~~~~~~ik~~~~iPVi~~ 283 (340)
T 3gr7_A 213 FVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPAR--MN--V-----YPGYQVPFAELIRREADIPTGAV 283 (340)
T ss_dssp EEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCC--CC--C-----CTTTTHHHHHHHHHHTTCCEEEE
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCC--CC--C-----CccccHHHHHHHHHHcCCcEEee
Confidence 45543 44445667888899999999999999999988643211 11 1 1477889999999999999963
Q ss_pred --CC-hhhHHHHHhcc-cc----cccccCCCeEEEEEEEee
Q 005273 116 --ML-PAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 116 --~~-p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
+. |+.|+++++.+ +| +|..|+||+|+.++..+.
T Consensus 284 GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l 324 (340)
T 3gr7_A 284 GLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAREL 324 (340)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHHHC
Confidence 54 99999999877 99 999999999988776554
No 280
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.38 E-value=8.8e-05 Score=81.48 Aligned_cols=35 Identities=31% Similarity=0.568 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+||||||+|+++|+.|+++|++|+|+|+.+.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~ 56 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKP 56 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCCh
Confidence 47899999999999999999999999999999863
No 281
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.36 E-value=0.00011 Score=82.29 Aligned_cols=40 Identities=35% Similarity=0.425 Sum_probs=37.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
.+||+|||||++||+||+.|++.|++|+|+|+.+.+|++.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 5799999999999999999999999999999999988753
No 282
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.35 E-value=9.3e-05 Score=79.57 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=36.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
+||+|||||++|+.+|+.|++.|++|+|+|+.+.+|++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 589999999999999999999999999999998888754
No 283
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.34 E-value=0.00064 Score=75.33 Aligned_cols=55 Identities=16% Similarity=0.332 Sum_probs=38.4
Q ss_pred CCCEEEeCeEEEEEEEeC-C-EEEEEEEcCCC-------CC--CCCceeEEecCeEEEcCCCChHH
Q 005273 345 LGVTIKFGTRVDDLLIEN-A-RIVGVKVSDSK-------DN--SQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 345 ~Gv~i~~~t~V~~i~~~~-g-~v~GV~~~~~~-------~~--~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.|+++++++.+.++..++ + ++.+|++.... .. .+++...+.+|.||+|+|..++.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 789999999999987653 5 67777765210 00 01123579999999999987753
No 284
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.28 E-value=0.00023 Score=73.94 Aligned_cols=103 Identities=8% Similarity=0.144 Sum_probs=73.5
Q ss_pred CCcEEEEcCCH-HHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhhcc
Q 005273 219 KPKVAVVGGGP-SGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRIGR 297 (704)
Q Consensus 219 ~~~v~vvG~G~-aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~~~ 297 (704)
.++++|||||. +++++|..+.+.|.+|+++++.+..
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~------------------------------------------- 182 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL------------------------------------------- 182 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC-------------------------------------------
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc-------------------------------------------
Confidence 45688888775 5689999998889999998776432
Q ss_pred CchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCC
Q 005273 298 NSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNS 377 (704)
Q Consensus 298 ~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~ 377 (704)
...+.+.+++.|+.++.++ +..+..+++++.+|++.++
T Consensus 183 -------------------------------------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g---- 220 (304)
T 4fk1_A 183 -------------------------------------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSG---- 220 (304)
T ss_dssp -------------------------------------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTS----
T ss_pred -------------------------------------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeecccc----
Confidence 1223456677899998765 6777666777888888776
Q ss_pred CCceeEEecCeEEEcCCCChHHHHHHHHhCCCccc
Q 005273 378 QSDIQKLGFDAVILAVGHSARDIYEMLVSHNINLV 412 (704)
Q Consensus 378 ~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l~ 412 (704)
.++.+|.+|+++|+...+ ..+...|+.+.
T Consensus 221 ----~~i~~~~~vi~~g~~~~~--~~~~~~g~~~~ 249 (304)
T 4fk1_A 221 ----LRIERAGGFIVPTFFRPN--QFIEQLGCELQ 249 (304)
T ss_dssp ----CEECCCEEEECCEEECSS--CHHHHTTCCCC
T ss_pred ----ceeeecceeeeeccccCC--hhhhhcCeEEC
Confidence 468899999998876543 23455565543
No 285
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.27 E-value=0.0002 Score=77.54 Aligned_cols=39 Identities=31% Similarity=0.465 Sum_probs=36.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccccccc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQRG 258 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~ 258 (704)
++|+|||||++|+.+|+.|++.|++|+|+|+.+.+|++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcc
Confidence 689999999999999999999999999999999887653
No 286
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.23 E-value=0.00064 Score=79.80 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=32.5
Q ss_pred CCCcEEEEc--CCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 218 RKPKVAVVG--GGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG--~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
..++|+||| ||..|+++|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 357999999 99999999999999999999999986
No 287
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.21 E-value=0.00024 Score=82.52 Aligned_cols=42 Identities=40% Similarity=0.581 Sum_probs=38.3
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 216 RTRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 216 ~~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
....++|+|||+|++||+||+.|+++|++|+|+|+.+.+|++
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 345689999999999999999999999999999999888764
No 288
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.19 E-value=7.6e-05 Score=79.29 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=75.7
Q ss_pred eeEee--ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC-
Q 005273 39 AIRCA--KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS- 115 (704)
Q Consensus 39 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~- 115 (704)
.+|.. +-..++....|...+.++.+++ +|+++++.|.+... +... ..|++.++++.||+.+++||+.
T Consensus 214 ~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~----~~~~-----~~~~~~~~~~~ir~~~~iPVi~~ 283 (343)
T 3kru_A 214 FVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNV----DINL-----YPGYQVKYAETIKKRCNIKTSAV 283 (343)
T ss_dssp EEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCC----CCCC-----CTTTTHHHHHHHHHHHTCEEEEE
T ss_pred EEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEee----eecc-----cCceeehHHHHHHHhcCccccee
Confidence 45543 4444456678889999999999 99999988854321 1111 1477889999999999999963
Q ss_pred --CC-hhhHHHHHhcc-cc----cccccCCCeEEEEEE
Q 005273 116 --ML-PAEAFTVVRKS-FD----ARKVLKEPKFVYTVD 145 (704)
Q Consensus 116 --~~-p~~a~~i~~~~-~D----aR~~ladp~~~~kv~ 145 (704)
+. |+.|+++++.+ +| +|..|+||+|+.|+.
T Consensus 284 Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 284 GLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred eeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 54 99999999877 89 999999999999887
No 289
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.19 E-value=0.0003 Score=78.56 Aligned_cols=41 Identities=34% Similarity=0.558 Sum_probs=37.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCccccccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELG-ADVTLIERGQAVEQRG 258 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~~~~~~~ 258 (704)
..++|+|||||++||+||+.|++.| .+|+|+|+.+.+|++.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 3579999999999999999999999 7999999999887754
No 290
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.18 E-value=9.3e-05 Score=79.01 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=78.3
Q ss_pred eeEee--ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC-
Q 005273 39 AIRCA--KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS- 115 (704)
Q Consensus 39 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~- 115 (704)
.+|.+ +...++-.+.|...+.++.+++++|++|++.|.+... ..+| . ..+++.++++.|++.+++||+.
T Consensus 223 ~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~-~~~~--~-----~~~~~~~~~~~ir~~~~iPVi~~ 294 (349)
T 3hgj_A 223 FVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLR-VRIP--L-----APGFQVPFADAVRKRVGLRTGAV 294 (349)
T ss_dssp EEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSS-SCCC--C-----CTTTTHHHHHHHHHHHCCEEEEC
T ss_pred EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcc-cccC--C-----CccccHHHHHHHHHHcCceEEEE
Confidence 55544 5555566778899999999999999999998754321 1112 1 1367889999999999999963
Q ss_pred --C-ChhhHHHHHhcc-cc----cccccCCCeEEEEEEEee
Q 005273 116 --M-LPAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 116 --~-~p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
+ +|+.|+++++.+ +| +|+.|+||+|+.|+..++
T Consensus 295 Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 335 (349)
T 3hgj_A 295 GLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL 335 (349)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHHHC
Confidence 5 499999999877 89 999999999988766544
No 291
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.14 E-value=0.00017 Score=83.63 Aligned_cols=36 Identities=33% Similarity=0.568 Sum_probs=34.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--------CcEEEEEeCc-cc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--------ADVTLIERGQ-AV 254 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--------~~v~l~e~~~-~~ 254 (704)
.++|+|||||++||+||+.|++.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999999 9999999998 77
No 292
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.05 E-value=0.0017 Score=73.46 Aligned_cols=36 Identities=25% Similarity=0.293 Sum_probs=33.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|+|||+|..|+++|..|++.|.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 468999999999999999999999999999999876
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.03 E-value=0.0016 Score=75.60 Aligned_cols=52 Identities=21% Similarity=0.323 Sum_probs=38.8
Q ss_pred HHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEE-cCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 336 RNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKV-SDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 336 ~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~-~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
..+.+.+++.||+++++++|+++. ++. +.+ .++ +..++.+|.||+|+|..++
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~---v~~~~~G------~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG---LHVVING------ETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE---EEEEETT------EEEEECCSEEEECCCEEEC
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe---EEEecCC------eEEEEeCCEEEECCCcccc
Confidence 445677888999999999999875 333 333 333 1247999999999998775
No 294
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=97.02 E-value=8.1e-05 Score=79.14 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=77.4
Q ss_pred ccCCCCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---C-Chh
Q 005273 44 KRTGKQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---M-LPA 119 (704)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~-~p~ 119 (704)
+...++-...+...+.++.++.++|++|++.|++... ..| . ..+++.++++.|++.+++||+. + +|+
T Consensus 220 ~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~--~~~---~----~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~ 290 (338)
T 1z41_A 220 DYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHA--DIN---V----FPGYQVSFAEKIREQADMATGAVGMITDGS 290 (338)
T ss_dssp CCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCC--CCC---C----CTTTTHHHHHHHHHHHCCEEEECSSCCSHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccC--CCC---C----CccchHHHHHHHHHHCCCCEEEECCCCCHH
Confidence 3344466777889999999999999999999864211 111 1 1366788999999999999963 6 499
Q ss_pred hHHHHHhcc-cc----cccccCCCeEEEEEEEeeccc
Q 005273 120 EAFTVVRKS-FD----ARKVLKEPKFVYTVDMDVSKL 151 (704)
Q Consensus 120 ~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~~~~ 151 (704)
.++++++.+ +| +|..|+||+|+.++..+..++
T Consensus 291 ~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~~ 327 (338)
T 1z41_A 291 MAEEILQNGRADLIFIGRELLRDPFFARTAAKQLNTE 327 (338)
T ss_dssp HHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTCC
T ss_pred HHHHHHHcCCceEEeecHHHHhCchHHHHHHcCCCcc
Confidence 999999877 99 999999999999887776543
No 295
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.99 E-value=0.0016 Score=71.94 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=41.5
Q ss_pred HHHHHHHHHH------CCCEEEeCeEEEEEEEeCCEEEEEEEcCC----CC------CCCCceeEEecCeEEEcCCCChH
Q 005273 335 LRNFRQHLQR------LGVTIKFGTRVDDLLIENARIVGVKVSDS----KD------NSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 335 ~~~L~~~l~~------~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~----~~------~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
.+.|.+.+++ .|+++++++.+.++..+ +++.+|++.+. ++ ..+++..++.+|.||+|+|..+.
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~ 327 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGV 327 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccC
Confidence 3455555555 78999999999998643 55666666420 00 00112357999999999998764
No 296
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.96 E-value=0.0029 Score=71.55 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=33.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|+|||+|+.|+++|..|++.+.+|+|+++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 467999999999999999999999999999999875
No 297
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.91 E-value=0.00014 Score=78.04 Aligned_cols=102 Identities=19% Similarity=0.278 Sum_probs=76.4
Q ss_pred eeEee--ccCCCC-CCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC
Q 005273 39 AIRCA--KRTGKQ-RYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS 115 (704)
Q Consensus 39 ~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~ 115 (704)
.+|.+ +-..++ -...|...+.++.+++++|++|++.|.+... ...| .. .+++.++++.||+.+++||+.
T Consensus 229 ~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~-~~~~--~~-----~~~~~~~~~~ir~~~~iPVi~ 300 (363)
T 3l5l_A 229 TARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPD-TNIP--WG-----PAFMGPIAERVRREAKLPVTS 300 (363)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC-CCCC--CC-----TTTTHHHHHHHHHHHTCCEEE
T ss_pred EEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccc-cccC--CC-----cchhHHHHHHHHHHcCCcEEE
Confidence 55544 333333 4567888999999999999999999864321 1112 11 367789999999999999963
Q ss_pred ---CC-hhhHHHHHhcc-cc----cccccCCCeEEEEEEEee
Q 005273 116 ---ML-PAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 116 ---~~-p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
+. |+.|+++++.+ +| +|..|+||+|+.++...+
T Consensus 301 ~GgI~s~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l 342 (363)
T 3l5l_A 301 AWGFGTPQLAEAALQANQLDLVSVGRAHLADPHWAYFAAKEL 342 (363)
T ss_dssp CSSTTSHHHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHT
T ss_pred eCCCCCHHHHHHHHHCCCccEEEecHHHHhCchHHHHHHHHc
Confidence 54 99999999877 89 999999999988766543
No 298
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.69 E-value=0.0095 Score=67.39 Aligned_cols=36 Identities=25% Similarity=0.465 Sum_probs=33.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|+|||+|..|+++|..|++.|.+|+++++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 467999999999999999999999999999999875
No 299
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=96.61 E-value=0.00018 Score=77.09 Aligned_cols=100 Identities=14% Similarity=0.027 Sum_probs=70.9
Q ss_pred ceeEee--ccCCCCCCcchh---HHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCC
Q 005273 38 PAIRCA--KRTGKQRYPSEK---KKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFP 112 (704)
Q Consensus 38 ~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ip 112 (704)
..+|.+ +...++....+. ..+.....+.++|.++++.|.+.. ..+ .+...++++.||+.++.|
T Consensus 221 v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~---------~~~~~~~a~~ik~~~~~~ 288 (358)
T 4a3u_A 221 TAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDG---TFG---------KTDQPKLSPEIRKVFKPP 288 (358)
T ss_dssp EEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTC---SSS---------BCSSCCCHHHHHHHCCSC
T ss_pred eEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccC---ccc---------ccccHHHHHHHHHhcCCc
Confidence 356744 444444433322 445666778899999999985321 111 233446889999999999
Q ss_pred CCC---CChhhHHHHHhcc-cc----cccccCCCeEEEEEEEeec
Q 005273 113 VAS---MLPAEAFTVVRKS-FD----ARKVLKEPKFVYTVDMDVS 149 (704)
Q Consensus 113 v~~---~~p~~a~~i~~~~-~D----aR~~ladp~~~~kv~~~~~ 149 (704)
+.. .+|+.|+++|+.+ +| +|+.|+||+|++|++.+..
T Consensus 289 v~~~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k~~~g~p 333 (358)
T 4a3u_A 289 LVLNQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRRFFEKAP 333 (358)
T ss_dssp EEEESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred EEEeCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHHHHhCCC
Confidence 863 4599999999777 89 9999999999999888753
No 300
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.54 E-value=0.0034 Score=68.66 Aligned_cols=57 Identities=7% Similarity=0.049 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 334 LLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 334 l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+...+.+.+++.||+++++++|+++. ++. +++.+..+ +..++.+|.||+|+|..+..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~--~~~---v~~~~~~~----~g~~i~~D~vv~a~G~~~~~ 258 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDK---VIYEDLNG----NTHEVPAKFTMFMPSFQGPE 258 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSE---EEEECTTS----CEEEEECSEEEEECEEECCH
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEe--CCe---EEEEecCC----CceEEeeeEEEECCCCccch
Confidence 44667788889999999999999884 332 44544211 12579999999999976653
No 301
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.52 E-value=0.005 Score=66.69 Aligned_cols=54 Identities=9% Similarity=0.133 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHH
Q 005273 333 PLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 333 ~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
.+.+.+.+.+++.||+++++++|+++.. + +|++.++ .++.+|.||+|+|..+..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~---~v~~~~g--------~~~~~D~vi~a~G~~~~~ 272 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIRE--H---EIVDEKG--------NTIPADITILLPPYTGNP 272 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECS--S---EEEETTS--------CEEECSEEEEECCEECCH
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECC--C---eEEECCC--------CEEeeeEEEECCCCCccH
Confidence 3567778888899999999999998843 3 3666664 379999999999987764
No 302
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.50 E-value=0.005 Score=68.17 Aligned_cols=36 Identities=19% Similarity=0.071 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|+|||+|.+|+.+|..|++.|.+|+++++.+.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 367999999999999999999999999999998754
No 303
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.44 E-value=0.0021 Score=70.69 Aligned_cols=35 Identities=23% Similarity=0.128 Sum_probs=32.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGAD-VTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~-v~l~e~~~ 252 (704)
..++|+|||+|.+|+..|..|++.|.+ |+|+++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 367999999999999999999999999 99998864
No 304
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.42 E-value=0.0069 Score=66.32 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChH
Q 005273 334 LLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSAR 398 (704)
Q Consensus 334 l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~ 398 (704)
+...+.+.+++.||+++++++|+++. ++.+. +...+.++ ...+..++.+|.||+|+|..+.
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~-~~~~~~~g-~~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVE--DNKMY-VTQVDEKG-ETIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEE--TTEEE-EEEECTTS-CEEEEEEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--CCeEE-EEecccCC-ccccceEEEEeEEEEcCCCcCc
Confidence 34566778889999999999999884 34322 11111111 0111357899999999996554
No 305
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=96.39 E-value=0.00029 Score=75.30 Aligned_cols=77 Identities=9% Similarity=0.100 Sum_probs=64.1
Q ss_pred chhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCC---CCChhhHHHHHhcc-
Q 005273 53 SEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVA---SMLPAEAFTVVRKS- 128 (704)
Q Consensus 53 ~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~---~~~p~~a~~i~~~~- 128 (704)
.+...+.++.+++++|+++++.|+ + .+ ++++.||+.+++||+ .++|+.|+++++.+
T Consensus 250 ~~~~~la~~l~~~Gvd~i~v~~~~---~--------~~---------~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~ 309 (361)
T 3gka_A 250 ATFGHVARELGRRRIAFLFARESF---G--------GD---------AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQ 309 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC---S--------TT---------CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC---C--------CH---------HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCC
Confidence 356889999999999999999985 1 01 368899999999986 36899999999776
Q ss_pred cc----cccccCCCeEEEEEEEeec
Q 005273 129 FD----ARKVLKEPKFVYTVDMDVS 149 (704)
Q Consensus 129 ~D----aR~~ladp~~~~kv~~~~~ 149 (704)
+| +|..|+||+|+.|+..+..
T Consensus 310 aD~V~iGR~~ladPdl~~k~~~g~~ 334 (361)
T 3gka_A 310 ADAVAWGKLFIANPDLPRRFKLNAP 334 (361)
T ss_dssp CSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred ccEEEECHHhHhCcHHHHHHHhCCC
Confidence 89 9999999999998877653
No 306
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=96.38 E-value=0.00029 Score=75.26 Aligned_cols=76 Identities=12% Similarity=0.014 Sum_probs=63.6
Q ss_pred hhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CChhhHHHHHhcc-c
Q 005273 54 EKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---MLPAEAFTVVRKS-F 129 (704)
Q Consensus 54 ~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~p~~a~~i~~~~-~ 129 (704)
+...+.+..+++++|+++++.|+ . .+ ++++.||+.+++||+. ++|+.|+++++.+ +
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~---~--------~~---------~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~a 302 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRERE---A--------DD---------SIGPLIKEAFGGPYIVNERFDKASANAALASGKA 302 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC---C--------TT---------CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhCCCEEEECCCC---C--------CH---------HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCc
Confidence 56888999999999999999985 0 01 3688999999999963 6799999999776 8
Q ss_pred c----cccccCCCeEEEEEEEeec
Q 005273 130 D----ARKVLKEPKFVYTVDMDVS 149 (704)
Q Consensus 130 D----aR~~ladp~~~~kv~~~~~ 149 (704)
| +|+.|+||+|+.|+..+..
T Consensus 303 D~V~iGR~~lanPdl~~k~~~g~~ 326 (362)
T 4ab4_A 303 DAVAFGVPFIANPDLPARLAADAP 326 (362)
T ss_dssp SEEEESHHHHHCTTHHHHHHTTCC
T ss_pred cEEEECHHhHhCcHHHHHHHcCCC
Confidence 9 9999999999998877643
No 307
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=96.17 E-value=0.00054 Score=74.33 Aligned_cols=91 Identities=9% Similarity=0.055 Sum_probs=69.0
Q ss_pred cchhHHHHHHhhhcc------cccccccccceEeecccccCC-CCCCCCccc-chHHHHHHHHHHcCCCCCC---CChhh
Q 005273 52 PSEKKKLKQKHKQVL------NDVNNKFEGFWRLSKLAVPVH-KDPGKDFIG-VSHALLDEITKVLQFPVAS---MLPAE 120 (704)
Q Consensus 52 ~~~~~~~~~~~~~~~------~d~~~~~~g~~~~~~~~~~~~-~~~~~~~~g-~~~~l~~~i~k~~~ipv~~---~~p~~ 120 (704)
..+...+.++.++++ +|+++++.|++.. ...+.. ..+ .+ ...++++.||+.+++||+. ++|+.
T Consensus 259 ~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~ 332 (402)
T 2hsa_B 259 LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVA--YGQTEAGRLG----SEEEEARLMRTLRNAYQGTFICSGGYTREL 332 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCT--TTTSSSTTTT----HHHHHHHHHHHHHHHCSSCEEEESSCCHHH
T ss_pred HHHHHHHHHHHHhcCCccCCceEEEEEecCcccc--ccCCcccccc----CCcchHHHHHHHHHHCCCCEEEeCCCCHHH
Confidence 456788999999999 9999999997532 111110 000 13 2467889999999999963 67999
Q ss_pred HHHHHhcc-cc----cccccCCCeEEEEEEEee
Q 005273 121 AFTVVRKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 121 a~~i~~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
|+++++.+ +| +|+.|+||+|+.|+..+.
T Consensus 333 a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~ 365 (402)
T 2hsa_B 333 GIEAVAQGDADLVSYGRLFISNPDLVMRIKLNA 365 (402)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred HHHHHHCCCCceeeecHHHHhCchHHHHHHhCC
Confidence 99999777 99 999999999999887553
No 308
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.15 E-value=0.0044 Score=64.94 Aligned_cols=33 Identities=27% Similarity=0.450 Sum_probs=30.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|+|||+|..|+++|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 579999999999999999999998 699998873
No 309
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=96.11 E-value=0.00093 Score=71.88 Aligned_cols=86 Identities=8% Similarity=0.004 Sum_probs=66.7
Q ss_pred CCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CChhhHHHHHh
Q 005273 50 RYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---MLPAEAFTVVR 126 (704)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~p~~a~~i~~ 126 (704)
....+...+.++.+++++|+++++.|++... +. +...++++.||+.+++||+. +.|+.|+++++
T Consensus 252 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~----~~---------~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~ 318 (377)
T 2r14_A 252 EPEAMAFYLAGELDRRGLAYLHFNEPDWIGG----DI---------TYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLD 318 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC-------------------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCC----CC---------cchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
Confidence 3456678899999999999999999975321 11 11246889999999999963 67999999998
Q ss_pred cc-cc----cccccCCCeEEEEEEEee
Q 005273 127 KS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 127 ~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
.+ +| +|..|+||+|+.++..+.
T Consensus 319 ~g~aD~V~igR~~l~~P~l~~k~~~g~ 345 (377)
T 2r14_A 319 DNTADAVAFGRPFIANPDLPERFRLGA 345 (377)
T ss_dssp TTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred CCCceEEeecHHHHhCchHHHHHHcCC
Confidence 77 99 999999999998776553
No 310
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=95.84 E-value=0.0014 Score=70.27 Aligned_cols=86 Identities=9% Similarity=-0.015 Sum_probs=68.0
Q ss_pred CCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CChhhHHHHH
Q 005273 49 QRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---MLPAEAFTVV 125 (704)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~p~~a~~i~ 125 (704)
+....+...+.++.+++++|+++++.+.+.. .+ ++..++++.||+.+++||+. ++|+.|++++
T Consensus 246 ~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~---------~~-----~~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l 311 (365)
T 2gou_A 246 ADPILTYTAAAALLNKHRIVYLHIAEVDWDD---------AP-----DTPVSFKRALREAYQGVLIYAGRYNAEKAEQAI 311 (365)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEECCBTTB---------CC-----CCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC---------CC-----CccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHH
Confidence 3445567888999999999999999985421 11 12357899999999999963 6799999999
Q ss_pred hcc-cc----cccccCCCeEEEEEEEee
Q 005273 126 RKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 126 ~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
+.+ +| +|..|+||+|+.++..+.
T Consensus 312 ~~g~aD~V~igR~~i~~P~l~~~~~~g~ 339 (365)
T 2gou_A 312 NDGLADMIGFGRPFIANPDLPERLRHGY 339 (365)
T ss_dssp HTTSCSEEECCHHHHHCTTHHHHHHHTC
T ss_pred HCCCcceehhcHHHHhCchHHHHHHcCC
Confidence 877 99 999999999988776543
No 311
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=95.69 E-value=0.00071 Score=72.84 Aligned_cols=85 Identities=14% Similarity=0.020 Sum_probs=67.1
Q ss_pred CCCCcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CChhhHHHH
Q 005273 48 KQRYPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---MLPAEAFTV 124 (704)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~p~~a~~i 124 (704)
.+-...+...+.++.++.++|+++++.|.+.. + ..| .+ ++.||+.+++||+. ++|+.|+++
T Consensus 261 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~-----~--~~~--------~~-~~~ir~~~~iPvi~~G~it~~~a~~~ 324 (379)
T 3aty_A 261 DSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN-----Q--QIG--------DV-VAWVRGSYSGVKISNLRYDFEEADQQ 324 (379)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS-----C--CCC--------CH-HHHHHTTCCSCEEEESSCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC-----C--Ccc--------HH-HHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 34445667889999999999999999985421 1 111 26 88999999999963 679999999
Q ss_pred Hhcc-cc----cccccCCCeEEEEEEEee
Q 005273 125 VRKS-FD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 125 ~~~~-~D----aR~~ladp~~~~kv~~~~ 148 (704)
++.+ +| +|..|+||+|+.++..+.
T Consensus 325 l~~g~aD~V~igR~~l~~P~l~~k~~~g~ 353 (379)
T 3aty_A 325 IREGKVDAVAFGAKFIANPDLVERAQQNW 353 (379)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred HHcCCCeEEEecHHHHhCcHHHHHHHcCC
Confidence 9877 99 999999999998776553
No 312
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=95.63 E-value=0.0017 Score=69.50 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=66.1
Q ss_pred CcchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CChhhHHHHHhc
Q 005273 51 YPSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---MLPAEAFTVVRK 127 (704)
Q Consensus 51 ~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~p~~a~~i~~~ 127 (704)
...+...+.++.+++++|+++++.+.+.. .| ....++++.||+.+++||+. ++|+.++++++.
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~----~~----------~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~ 314 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAG----GK----------PYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGK 314 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTB----CC----------CCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccC----CC----------cccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHC
Confidence 44567788999999999999999975421 01 11256889999999999963 679999999987
Q ss_pred c-cc----cccccCCCeEEEEEEEe
Q 005273 128 S-FD----ARKVLKEPKFVYTVDMD 147 (704)
Q Consensus 128 ~-~D----aR~~ladp~~~~kv~~~ 147 (704)
+ +| +|..|+||+|+.++..+
T Consensus 315 g~aD~V~~gR~~l~~P~~~~~~~~g 339 (364)
T 1vyr_A 315 GLIDAVAFGRDYIANPDLVARLQKK 339 (364)
T ss_dssp TSCSEEEESHHHHHCTTHHHHHHHT
T ss_pred CCccEEEECHHHHhChhHHHHHHcC
Confidence 7 99 99999999998877654
No 313
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=95.40 E-value=0.0019 Score=69.38 Aligned_cols=84 Identities=7% Similarity=-0.004 Sum_probs=64.2
Q ss_pred cchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCC---CCChhhHHHHHhcc
Q 005273 52 PSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVA---SMLPAEAFTVVRKS 128 (704)
Q Consensus 52 ~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~---~~~p~~a~~i~~~~ 128 (704)
..+...+.++.+++++|+++++.|++... -|... ..++++.||+.+++||+ .+.|+.++++++.+
T Consensus 255 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~---~~~~~---------~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g 322 (376)
T 1icp_A 255 TALGLYMVESLNKYDLAYCHVVEPRMKTA---WEKIE---------CTESLVPMRKAYKGTFIVAGGYDREDGNRALIED 322 (376)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEECCSCCC------------------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCC---CCccc---------cHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCC
Confidence 34568899999999999999999865310 01000 12467889999999996 36799999999777
Q ss_pred -cc----cccccCCCeEEEEEEEe
Q 005273 129 -FD----ARKVLKEPKFVYTVDMD 147 (704)
Q Consensus 129 -~D----aR~~ladp~~~~kv~~~ 147 (704)
+| +|+.|+||+|+.|+..+
T Consensus 323 ~aD~V~~gR~~l~~P~l~~k~~~g 346 (376)
T 1icp_A 323 RADLVAYGRLFISNPDLPKRFELN 346 (376)
T ss_dssp SCSEEEESHHHHHCTTHHHHHHHT
T ss_pred CCcEEeecHHHHhCccHHHHHHcC
Confidence 99 99999999999877654
No 314
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.21 E-value=0.083 Score=58.86 Aligned_cols=36 Identities=31% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~ 253 (704)
.+++|+|||+|.+|...+..|++. +.+|+++-|...
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 468999999999999999999875 678999988753
No 315
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.99 E-value=0.24 Score=55.59 Aligned_cols=37 Identities=27% Similarity=0.441 Sum_probs=33.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
..++|+|||+|..|+..|..|++.|.+|+++++.+..
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 3689999999999999999999999999999997643
No 316
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.56 E-value=0.048 Score=60.62 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=44.5
Q ss_pred HHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHHHHHHHhCCCcc
Q 005273 341 HLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDIYEMLVSHNINL 411 (704)
Q Consensus 341 ~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~~~~l~~~gi~l 411 (704)
.+++.||++++++.|+++..+ +++.+|.+.++ .++.+|.||+|+|.+++. ++++..|+.+
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~-~~v~~v~~~~g--------~~i~aD~Vv~a~G~~p~~--~l~~~~g~~~ 325 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGN-EKVERVIDMNN--------HEYKVDALIFADGRRPDI--NPITQAGGKL 325 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECS-SSCCEEEETTC--------CEEECSEEEECCCEEECC--HHHHHTTCCE
T ss_pred HHHhCCcEEEeCCeeEEEecC-CceEEEEeCCC--------eEEEeCEEEECCCcCcCc--hHHHhcCCCc
Confidence 355679999999999998643 44666766554 479999999999998864 3455666654
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.53 E-value=0.048 Score=49.48 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
....+|+|+|.|..|...|..|.+.|++|+++|+.+.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3356899999999999999999999999999999864
No 318
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.50 E-value=0.0035 Score=66.30 Aligned_cols=93 Identities=11% Similarity=0.036 Sum_probs=64.6
Q ss_pred cchhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCccc-----chHHHHHHHHHHc--CCCCCC---CC-hhh
Q 005273 52 PSEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIG-----VSHALLDEITKVL--QFPVAS---ML-PAE 120 (704)
Q Consensus 52 ~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g-----~~~~l~~~i~k~~--~ipv~~---~~-p~~ 120 (704)
..|...+.++.+++|+|+++++.+.+....+..+....+..-..| ...++.+.|++.+ ++||+. |. ++.
T Consensus 224 ~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~d 303 (336)
T 1f76_A 224 EEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIA 303 (336)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHH
Confidence 346788889999999999999987643322222221111000012 2347888999999 899963 55 999
Q ss_pred HHHHHhcccc----cccccC-CCeEEEEE
Q 005273 121 AFTVVRKSFD----ARKVLK-EPKFVYTV 144 (704)
Q Consensus 121 a~~i~~~~~D----aR~~la-dp~~~~kv 144 (704)
++++++.++| +|..|+ ||+|+.++
T Consensus 304 a~~~l~~GAd~V~igr~~l~~~P~~~~~i 332 (336)
T 1f76_A 304 AREKIAAGASLVQIYSGFIFKGPPLIKEI 332 (336)
T ss_dssp HHHHHHHTCSEEEESHHHHHHCHHHHHHH
T ss_pred HHHHHHCCCCEEEeeHHHHhcCcHHHHHH
Confidence 9999988898 999988 89887654
No 319
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.31 E-value=0.12 Score=56.16 Aligned_cols=58 Identities=7% Similarity=0.066 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCChHHH
Q 005273 334 LLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSARDI 400 (704)
Q Consensus 334 l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s~~~ 400 (704)
..+.+.+.++++||++++++.|+++. .++ +.+.+.++ ..+++.+|.||+|+|..+.+.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~---~~~~~~~g----~~~~i~~d~vi~~~G~~~~~~ 259 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDK---VIYEDLNG----NTHEVPAKFTMFMPSFQGPEV 259 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSE---EEEECTTS----CEEEEECSEEEEECEEECCHH
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--CCc---eEEEeeCC----CceEeecceEEEeccCCCchH
Confidence 44566778889999999999999873 443 34444322 236899999999999877643
No 320
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.04 E-value=0.06 Score=49.68 Aligned_cols=36 Identities=14% Similarity=0.355 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
...+|+|+|+|..|...|..|.+.|++|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 356899999999999999999999999999998754
No 321
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.72 E-value=0.06 Score=48.13 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|+|+|..|...|..|.+.|++|+++++.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998653
No 322
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.50 E-value=0.077 Score=47.90 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|+|+|..|...|..|.+.|++|+++|+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998754
No 323
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=93.39 E-value=0.0036 Score=67.88 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=42.4
Q ss_pred chHHHHHHHHHHcCCCCCC---CC--hhhHHHHHhcccc----cccccCCCeEEEEEEEeec
Q 005273 97 VSHALLDEITKVLQFPVAS---ML--PAEAFTVVRKSFD----ARKVLKEPKFVYTVDMDVS 149 (704)
Q Consensus 97 ~~~~l~~~i~k~~~ipv~~---~~--p~~a~~i~~~~~D----aR~~ladp~~~~kv~~~~~ 149 (704)
+....++.||+.+++||+. +. |+.++.++++.+| +|+.|+||+||+|++.+..
T Consensus 305 ~~~~~~~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G~p 366 (400)
T 4gbu_A 305 YEGGSNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLP 366 (400)
T ss_dssp CCSCCSTHHHHHCCSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCC
T ss_pred hhhHHHHHHHHHhCCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcCCC
Confidence 4445667799999999963 43 6667777777799 9999999999999998864
No 324
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.14 E-value=0.07 Score=61.05 Aligned_cols=57 Identities=14% Similarity=0.048 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEeC--CEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCC
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIEN--ARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHS 396 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~--g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~ 396 (704)
..+.++|.+.++..|+++++++.|..|..++ ++++||+..++ ..+.||.||.+....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~G--------e~i~A~~VVs~~~~l 436 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFG--------QRIISKHFIIEDSYL 436 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTS--------CEEECSEEEEEGGGB
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCC--------CEEEcCEEEEChhhc
Confidence 3578889999999999999999999999988 88999986555 478999999855443
No 325
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.86 E-value=0.087 Score=45.46 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG-ADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~~ 253 (704)
.++|+|+|+|..|..++..|.+.| ++|+++++...
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 468999999999999999999999 89999998753
No 326
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.23 E-value=0.16 Score=46.58 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
..+|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999963
No 327
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.23 E-value=0.12 Score=46.20 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|+|+|+|..|...|..|.+.|++|+++++..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 328
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.02 E-value=0.09 Score=57.55 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|||.|++||++|..|+++|++|+++|....
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 46899999999999999999999999999998754
No 329
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.73 E-value=0.16 Score=48.10 Aligned_cols=35 Identities=26% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~~ 253 (704)
..+|+|+|+|..|...|..|.+. |++|+++|+.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 46899999999999999999999 999999999754
No 330
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.47 E-value=0.14 Score=56.27 Aligned_cols=34 Identities=41% Similarity=0.408 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 5789999999999999999999999999999865
No 331
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.80 E-value=0.66 Score=44.93 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=34.0
Q ss_pred CCccccCcCCeeEccccchhhHHHHHHHHHHHHHHHHHHhhcCC
Q 005273 641 ETCESTSLKGLYPVGEGAGYAGGIVSAAADGMYAGFAVAKDFGL 684 (704)
Q Consensus 641 ~tles~~i~GLy~~GE~aG~~GGi~sA~~~G~~Aa~~i~~~~~~ 684 (704)
..+. ++.++||+|||..+. +|+..|+.+|..||++|++.|..
T Consensus 288 ~~~~-~~~~~v~l~GDa~~g-~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 288 GALS-DADLGIYVCGDWCLS-GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp SSEE-ETTTTEEECCGGGTT-SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccee-eCCCCEEEEecccCC-cCHHHHHHHHHHHHHHHHHHhhc
Confidence 3344 478999999998543 35899999999999999998865
No 332
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.01 E-value=0.22 Score=46.66 Aligned_cols=43 Identities=23% Similarity=0.410 Sum_probs=34.7
Q ss_pred CCCCCccccCcCCeeEccccchhhH-HHHHHHHHHHHHHHHHHhhc
Q 005273 638 RNNETCESTSLKGLYPVGEGAGYAG-GIVSAAADGMYAGFAVAKDF 682 (704)
Q Consensus 638 ~~~~tles~~i~GLy~~GE~aG~~G-Gi~sA~~~G~~Aa~~i~~~~ 682 (704)
+| +.|++ ++||+|++||+++... -+..|+..|..||..|...+
T Consensus 127 vd-~~~~t-~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 127 TD-EGGRT-SYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp CC-TTCBC-SSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CCCCc-CCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHh
Confidence 45 46885 9999999999987765 46678889999999988654
No 333
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=89.95 E-value=0.15 Score=54.55 Aligned_cols=35 Identities=40% Similarity=0.525 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~~ 253 (704)
+|+|||||||+||++||..|++.+ .+|+|+|+.+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 578999999999999999998876 58999998764
No 334
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.89 E-value=0.23 Score=50.67 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
+++|+|||||..|...|..|.+.|++|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 6789999999999999999999999999998754
No 335
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.87 E-value=0.24 Score=48.31 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|+|+|+|..|...|..|.+.|++|+++|+.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998764
No 336
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.79 E-value=0.22 Score=51.89 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+|.|||+|..|...|..++..|++|+|+|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998764
No 337
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.61 E-value=0.26 Score=48.68 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
..++|+|||||..|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999999999999999999999865
No 338
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.48 E-value=0.3 Score=51.13 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=31.5
Q ss_pred CCcEEEEcCCHHHHH-HHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLF-ASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~-aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|.+||+ +|..|.++|++|++.|+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578999999999997 78899999999999998753
No 339
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.15 E-value=0.27 Score=50.27 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=31.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..+++.|++|+++++.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5899999999999999999999999999998764
No 340
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.76 E-value=0.34 Score=52.15 Aligned_cols=36 Identities=33% Similarity=0.391 Sum_probs=32.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+.+|+|||+|.+|+.+|..+...|.+|+++|+...
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 357899999999999999999999999999998864
No 341
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=88.73 E-value=0.81 Score=52.27 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=27.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcccccc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAVEQR 257 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~ 257 (704)
.+||+|||+|..|...|..|++.|.+|+++||++..|+.
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 467777777777777777777777777777777766654
No 342
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.67 E-value=0.36 Score=49.76 Aligned_cols=35 Identities=31% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 36799999999999999999999999999998754
No 343
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=88.63 E-value=0.19 Score=52.29 Aligned_cols=40 Identities=20% Similarity=0.278 Sum_probs=29.9
Q ss_pred ccccCcCCeeEccccchhhHH-------HHHHHHHHHHHHHHHHhhcC
Q 005273 643 CESTSLKGLYPVGEGAGYAGG-------IVSAAADGMYAGFAVAKDFG 683 (704)
Q Consensus 643 les~~i~GLy~~GE~aG~~GG-------i~sA~~~G~~Aa~~i~~~~~ 683 (704)
++ +++||||++||.++..-| +..++.+|.+||+.|.+.|.
T Consensus 279 ~~-t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 279 AY-AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp EC-TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eE-ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 44 589999999998653332 22456789999999998763
No 344
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.39 E-value=0.34 Score=51.68 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=32.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+.+|+|||+|.+|+.+|..|...|.+|+++++...
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998864
No 345
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=88.25 E-value=0.24 Score=48.80 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=32.6
Q ss_pred CccccCcCCeeEccccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005273 642 TCESTSLKGLYPVGEGAGYAGGIVSAAADGMYAGFAVAKDF 682 (704)
Q Consensus 642 tles~~i~GLy~~GE~aG~~GGi~sA~~~G~~Aa~~i~~~~ 682 (704)
+++.+++||||++||++ ..|-+..++-+|..+|..|.+.+
T Consensus 192 ~~~~t~~p~iya~G~~a-~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 192 TFRLKRLEGLYAVGLCV-REGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTEETTSBSEEECGGGT-SCCCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccceeeeecc-cCccHHHHHHHHHHHHHHHHhhc
Confidence 34546999999999999 55546678899999999998775
No 346
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=88.10 E-value=0.26 Score=52.13 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=59.6
Q ss_pred hhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHc-CCCCCC---CC-hhhHHHHHhcc
Q 005273 54 EKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVL-QFPVAS---ML-PAEAFTVVRKS 128 (704)
Q Consensus 54 ~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~-~ipv~~---~~-p~~a~~i~~~~ 128 (704)
+...+.++.+++|+|+++++.+.... .+..... ....+...++.+.|++.+ ++||+. |. ++.++++++ +
T Consensus 145 ~~~~~a~~l~~aG~d~I~V~~r~~~~---g~~g~~~--~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-G 218 (350)
T 3b0p_A 145 GLAQSVEAMAEAGVKVFVVHARSALL---ALSTKAN--REIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-R 218 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCBC---------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-T
T ss_pred HHHHHHHHHHHcCCCEEEEecCchhc---ccCcccc--cCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-C
Confidence 56778888999999999998874210 0000000 001134568899999999 999963 54 999999998 7
Q ss_pred cc----cccccCCCeEEEEE
Q 005273 129 FD----ARKVLKEPKFVYTV 144 (704)
Q Consensus 129 ~D----aR~~ladp~~~~kv 144 (704)
+| +|+.|+||+|+.++
T Consensus 219 aD~V~iGRa~l~~P~l~~~i 238 (350)
T 3b0p_A 219 VDGVMLGRAVYEDPFVLEEA 238 (350)
T ss_dssp SSEEEECHHHHHCGGGGTTH
T ss_pred CCEEEECHHHHhCcHHHHHH
Confidence 88 99999998886544
No 347
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=88.05 E-value=0.36 Score=50.22 Aligned_cols=33 Identities=30% Similarity=0.533 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
++|.|||+|..|...|..|++.|++|+++.|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999875
No 348
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.83 E-value=0.38 Score=49.89 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
.++|+|||+|..|...|..|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999875
No 349
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.51 E-value=0.39 Score=50.10 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998864
No 350
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.44 E-value=0.52 Score=48.81 Aligned_cols=37 Identities=27% Similarity=0.273 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
...++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4457899999999999999999999999999998764
No 351
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=87.39 E-value=0.51 Score=49.82 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|+|||..|.++|+.+.+.|++|+++|..+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 36899999999999999999999999999998654
No 352
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=87.31 E-value=0.21 Score=45.27 Aligned_cols=35 Identities=20% Similarity=0.128 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|||+|..|...|..|++.|++|+++++...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 57899999999999999999999999999998754
No 353
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.27 E-value=0.49 Score=51.88 Aligned_cols=37 Identities=24% Similarity=0.432 Sum_probs=33.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
...++|.|||+|..|...|..+++.|++|+++|+.+.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3347899999999999999999999999999999865
No 354
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.18 E-value=0.45 Score=48.20 Aligned_cols=33 Identities=27% Similarity=0.301 Sum_probs=30.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|.|||+|..|...|..|++.|++|+++++...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 355
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.17 E-value=0.41 Score=52.92 Aligned_cols=35 Identities=31% Similarity=0.585 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|+..|..|++.|++|+++++...
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 47899999999999999999999999999998753
No 356
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.13 E-value=0.53 Score=49.94 Aligned_cols=35 Identities=31% Similarity=0.470 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+|+|+|+|.+|+.++..|...|.+|+++++...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~ 201 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVE 201 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 37899999999999999999999999999998753
No 357
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.92 E-value=0.46 Score=52.39 Aligned_cols=37 Identities=30% Similarity=0.542 Sum_probs=33.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
..++++|||+|+.|+++|..|++.|.+|+++++.+.+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 3679999999999999999999999999999998754
No 358
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=86.91 E-value=0.4 Score=49.67 Aligned_cols=33 Identities=33% Similarity=0.626 Sum_probs=30.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
++|.|||+|..|...|..|++.|++|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 359
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.69 E-value=0.53 Score=50.74 Aligned_cols=35 Identities=34% Similarity=0.400 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+.+|+|||+|.+|+.+|..+...|.+|+++++...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 57899999999999999999999999999998754
No 360
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=86.61 E-value=0.53 Score=45.72 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999988653
No 361
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=86.60 E-value=0.61 Score=46.45 Aligned_cols=36 Identities=36% Similarity=0.476 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 457899999999999999999999999999998754
No 362
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=86.56 E-value=0.47 Score=48.84 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|.|||+|..|...|..|+ .|++|+++|+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 3689999999999999999999 9999999998864
No 363
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.44 E-value=0.62 Score=48.80 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|...|..|+..|+ +|+|+|....
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4689999999999999999999998 9999998753
No 364
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.20 E-value=0.53 Score=47.21 Aligned_cols=35 Identities=34% Similarity=0.451 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|..+|..|++.|. +++|+|+...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4689999999999999999999997 7999998753
No 365
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.15 E-value=0.64 Score=49.45 Aligned_cols=35 Identities=29% Similarity=0.541 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+++|+|+|+|..|+.+|..|+..|++|+++++...
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 47899999999999999999999999999998753
No 366
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.13 E-value=0.58 Score=50.11 Aligned_cols=36 Identities=33% Similarity=0.331 Sum_probs=32.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+.+|+|+|+|.+|+.+|..+...|.+|+++++...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 367999999999999999999999999999998753
No 367
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.11 E-value=0.6 Score=48.86 Aligned_cols=32 Identities=28% Similarity=0.598 Sum_probs=30.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
++|.|||+|..|...|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999985
No 368
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.07 E-value=0.53 Score=48.28 Aligned_cols=33 Identities=30% Similarity=0.352 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
++|.|||+|..|...|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999974
No 369
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=86.04 E-value=0.52 Score=48.34 Aligned_cols=34 Identities=38% Similarity=0.538 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPA 37 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 5799999999999999999999999999998653
No 370
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=85.79 E-value=0.52 Score=51.67 Aligned_cols=34 Identities=41% Similarity=0.583 Sum_probs=31.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||.|..|+..|..|++.|++|+++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5799999999999999999999999999998754
No 371
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=85.77 E-value=0.62 Score=50.77 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=32.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
...+|.|||.|..||..|..|++.|++|+.+|-++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 457899999999999999999999999999998753
No 372
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.63 E-value=0.77 Score=44.72 Aligned_cols=35 Identities=26% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++...
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 373
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.62 E-value=0.6 Score=51.34 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998764
No 374
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=85.23 E-value=0.7 Score=46.83 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++++|+|+|.+|..+|..|++.|.+|+++.|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 5689999999999999999999999999998774
No 375
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=85.10 E-value=0.69 Score=48.06 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|+ +|+++|+...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999998 9999998753
No 376
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.99 E-value=0.78 Score=48.94 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+++|+|||+|.+|..+|..+...|.+|+++++...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998754
No 377
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.83 E-value=0.64 Score=50.84 Aligned_cols=35 Identities=20% Similarity=0.536 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.-++.|||.|..|+..|..|++.|++|+++++.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999864
No 378
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.62 E-value=0.78 Score=46.71 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=31.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998764
No 379
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.51 E-value=0.75 Score=47.74 Aligned_cols=33 Identities=36% Similarity=0.525 Sum_probs=29.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|.|||+|..|...|..|++.|++|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 654
No 380
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.41 E-value=0.69 Score=50.98 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=32.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL-GA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~-g~-~v~l~e~~~~ 253 (704)
.++|.|||+|..|+..|..|++. |+ +|+++++.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999999865
No 381
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.34 E-value=0.71 Score=48.89 Aligned_cols=35 Identities=34% Similarity=0.453 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 382
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.32 E-value=0.83 Score=47.78 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|+..|+ +|+++|....
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999999 9999998754
No 383
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.31 E-value=0.71 Score=47.72 Aligned_cols=33 Identities=36% Similarity=0.549 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
++|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999999 999999875
No 384
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.25 E-value=0.39 Score=52.84 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|+|+|-.|...|..|...|++|+++|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 57899999999999999999999999999999864
No 385
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=84.23 E-value=0.9 Score=49.11 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+|+|||.|..|...|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46799999999999999999999999999999864
No 386
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.13 E-value=0.73 Score=48.30 Aligned_cols=34 Identities=26% Similarity=0.205 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~ 38 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQ 38 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999988643
No 387
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.91 E-value=0.89 Score=46.12 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++++|+|+|.+|..+|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 67999999999999999999999999999988753
No 388
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=83.78 E-value=0.52 Score=47.05 Aligned_cols=75 Identities=5% Similarity=-0.016 Sum_probs=55.5
Q ss_pred hhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CC-hhhHHHHHhccc
Q 005273 54 EKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---ML-PAEAFTVVRKSF 129 (704)
Q Consensus 54 ~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~-p~~a~~i~~~~~ 129 (704)
+-..+.++.++.|+|.+++..-. .... ..|.+.++.+.|++.+++|+.. +. |+.++++++.++
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~---------~~~~----~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Ga 102 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSID---------RDGT----KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGA 102 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETT---------TTTC----SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHcCCCEEEEEecC---------cccC----CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCC
Confidence 45678888889999999764320 0011 1366789999999999999963 54 899999998888
Q ss_pred c----cccccCCCeEE
Q 005273 130 D----ARKVLKEPKFV 141 (704)
Q Consensus 130 D----aR~~ladp~~~ 141 (704)
| +|..+.||+|+
T Consensus 103 d~V~ig~~~l~dp~~~ 118 (247)
T 3tdn_A 103 DKVSINTAAVENPSLI 118 (247)
T ss_dssp SEECCSHHHHHCTHHH
T ss_pred CeeehhhHHhhChHHH
Confidence 8 77777777763
No 389
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.65 E-value=0.63 Score=50.70 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|.|||+|..|+..|..|++.|++|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999998753
No 390
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=83.56 E-value=0.8 Score=46.46 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=31.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++++|+|+|.+|..+|..|++.|.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 5789999999999999999999999999999875
No 391
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.32 E-value=0.84 Score=47.64 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
+.+|.|||+|..|...|..|++.|++|+++++..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999998864
No 392
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.26 E-value=0.86 Score=46.86 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998754
No 393
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=83.05 E-value=0.83 Score=47.17 Aligned_cols=33 Identities=39% Similarity=0.698 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|+|||+|..|...|..|+ .|++|+++.|...
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~ 35 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQE 35 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHH
Confidence 58999999999999999999 9999999998753
No 394
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=82.84 E-value=1 Score=47.98 Aligned_cols=35 Identities=31% Similarity=0.478 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
.-+|||+|+|.||+.+|..+...|. +|+++|+.-.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 4689999999999999999999999 8999999753
No 395
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=82.71 E-value=0.86 Score=46.40 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998764
No 396
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.62 E-value=1.3 Score=43.21 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=32.0
Q ss_pred CCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|+|.|| |..|...+..|+++|++|+++.|...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999997 99999999999999999999998754
No 397
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=82.35 E-value=1.2 Score=46.50 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|...|..|+..|+ +|+|+|....
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3589999999999999999999998 9999998653
No 398
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.32 E-value=0.82 Score=47.43 Aligned_cols=30 Identities=27% Similarity=0.436 Sum_probs=28.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEe
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIER 250 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~ 250 (704)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 689999999999999999999999999998
No 399
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=82.26 E-value=0.87 Score=49.45 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=31.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|+..|..|++ |++|+++++.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 4689999999999999999998 999999998764
No 400
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=82.13 E-value=1 Score=49.58 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++.|+|+|+|..|..+|..|+..|.+|++.++.+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~ 299 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPI 299 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 367899999999999999999999999999988653
No 401
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=82.13 E-value=0.91 Score=47.15 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 402
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=82.08 E-value=1.1 Score=49.25 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
+++|+|||+|..|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 578999999999999999999999999999975
No 403
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=81.92 E-value=0.89 Score=46.59 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++...
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 404
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.78 E-value=1 Score=49.79 Aligned_cols=35 Identities=31% Similarity=0.344 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++|+.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35799999999999999999999999999998864
No 405
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.70 E-value=1.1 Score=46.20 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
.++|+|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5689999999999999999999998 899998874
No 406
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=81.62 E-value=1.2 Score=42.84 Aligned_cols=33 Identities=33% Similarity=0.478 Sum_probs=30.2
Q ss_pred cEEEEc-CCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVG-GGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG-~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|+||| +|..|...|..|++.|++|+++++...
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~ 35 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE 35 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 689999 999999999999999999999998743
No 407
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=81.58 E-value=1.2 Score=46.34 Aligned_cols=34 Identities=35% Similarity=0.559 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
.++|.|||+|..|...|+.|+..|+ +|+++|..+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 4689999999999999999999999 999999873
No 408
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=81.57 E-value=1.2 Score=47.29 Aligned_cols=35 Identities=31% Similarity=0.444 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
...+|+|+|+|.+|..+|..|...|. +|+++|+.-
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35799999999999999999999998 799999874
No 409
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=81.49 E-value=1.4 Score=45.67 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=31.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 36789999999999999999999998 899998873
No 410
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=81.28 E-value=1.2 Score=46.16 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~ 253 (704)
++|+|||+|..|...|..|++. |++|+++|+...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 3699999999999999999985 789999999753
No 411
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.28 E-value=1.5 Score=44.92 Aligned_cols=35 Identities=34% Similarity=0.432 Sum_probs=32.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.+++|.|||.|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36789999999999999999999999999999875
No 412
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.23 E-value=1.5 Score=45.12 Aligned_cols=35 Identities=34% Similarity=0.504 Sum_probs=32.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
..++|.|||+|.+|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999999999999999875
No 413
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.20 E-value=1.7 Score=43.77 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|.|+|..|...+..|.+.|++|+++.|...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 36899999999999999999999999999998753
No 414
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=81.15 E-value=0.88 Score=46.66 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999998764
No 415
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=81.13 E-value=0.94 Score=49.05 Aligned_cols=52 Identities=17% Similarity=0.172 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCE-EEEEEEcCCCCCCCCceeEEecCeEEEcCCCC
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIENAR-IVGVKVSDSKDNSQSDIQKLGFDAVILAVGHS 396 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~-v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~ 396 (704)
..+.+.|.+.+ |++|+++++|++|..++++ +. |.+ ++ .++.||.||+|++..
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~v~-v~~-~~--------~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 215 QQVSIRMAEAL---GDDVFLNAPVRTVKWNESGATV-LAD-GD--------IRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHHH---GGGEECSCCEEEEEEETTEEEE-EET-TT--------EEEEEEEEEECSCGG
T ss_pred HHHHHHHHHhc---CCcEEcCCceEEEEEeCCceEE-EEE-CC--------eEEEcCEEEEcCCHH
Confidence 34666665544 7899999999999988876 43 443 22 478999999999865
No 416
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=81.04 E-value=1.2 Score=51.84 Aligned_cols=35 Identities=31% Similarity=0.295 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..+++.|++|+++|+.+.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 46899999999999999999999999999999864
No 417
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.87 E-value=1.5 Score=45.16 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998764
No 418
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=80.62 E-value=5.9 Score=41.58 Aligned_cols=36 Identities=25% Similarity=0.382 Sum_probs=31.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.....|+|+|+|+.|+.++..+...|.+|+++++.+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~ 223 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSR 223 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 346789999999999999988888999999998764
No 419
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=80.58 E-value=0.38 Score=52.40 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=63.7
Q ss_pred chhHHHHHHhhhcccccccccccceEeecccccCCCCCCCCcccc--------hHHHHHHHHHHc--CCCCCC---CC-h
Q 005273 53 SEKKKLKQKHKQVLNDVNNKFEGFWRLSKLAVPVHKDPGKDFIGV--------SHALLDEITKVL--QFPVAS---ML-P 118 (704)
Q Consensus 53 ~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~--------~~~l~~~i~k~~--~ipv~~---~~-p 118 (704)
.+...+++..+++|+|.+.++.++..-..+. ++.... .|+ ..++.+.|++.+ +|||+. |. +
T Consensus 311 ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~-~~~~~~----GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~ 385 (443)
T 1tv5_A 311 EQKKEIADVLLETNIDGMIISNTTTQINDIK-SFENKK----GGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 385 (443)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCBSCCCCCG-GGTTCC----SEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCccccccc-cccccc----CCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCH
Confidence 3677889999999999999999865211111 111111 233 357889999999 899974 54 9
Q ss_pred hhHHHHHhcccc----cccccC-CCeEEEEEEEe
Q 005273 119 AEAFTVVRKSFD----ARKVLK-EPKFVYTVDMD 147 (704)
Q Consensus 119 ~~a~~i~~~~~D----aR~~la-dp~~~~kv~~~ 147 (704)
+.|++.++.++| +|+.+. +|.|+.++..+
T Consensus 386 ~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~ 419 (443)
T 1tv5_A 386 LDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRE 419 (443)
T ss_dssp HHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHH
Confidence 999999988888 888776 78776554433
No 420
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.19 E-value=0.89 Score=48.94 Aligned_cols=32 Identities=31% Similarity=0.466 Sum_probs=29.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|.|||.|..|+..|..|++ |++|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 68999999999999999999 999999998753
No 421
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.18 E-value=1.7 Score=41.58 Aligned_cols=34 Identities=26% Similarity=0.354 Sum_probs=30.4
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|+|.|| |..|...+..|+++|++|+++.|...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 36999995 99999999999999999999998753
No 422
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=80.14 E-value=1.5 Score=45.66 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=30.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
+.+|+|||+|..|...|+.|+..|+ +++++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999988 899999864
No 423
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=80.05 E-value=1.5 Score=45.75 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|.|||+|..|...|..|+..|+ +|+|+|....
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4689999999999999999999999 9999998754
No 424
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=79.87 E-value=1.4 Score=46.05 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
..+|.|||+|..|...|+.|+..|+ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 5689999999999999999999997 899999864
No 425
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=79.83 E-value=1.5 Score=44.77 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 36789999999999999999999998 699998874
No 426
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=79.56 E-value=1.1 Score=45.65 Aligned_cols=35 Identities=14% Similarity=0.183 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
.++++|+|+|.+|..+|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 5789999999999999999999998 8999988753
No 427
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=79.44 E-value=1.2 Score=46.20 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.|+ +|+++|+...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~ 36 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKK 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChH
Confidence 369999999999999999999999 9999998753
No 428
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.41 E-value=1.4 Score=46.66 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 429
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=79.32 E-value=1.9 Score=44.66 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=31.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 35789999999999999999999998 799998873
No 430
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=79.28 E-value=1.4 Score=45.47 Aligned_cols=35 Identities=29% Similarity=0.577 Sum_probs=30.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
..+|.|||+|..|...|+.++..|+ +|+|+|....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4689999999999999999999998 8999998764
No 431
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=79.16 E-value=1.8 Score=41.66 Aligned_cols=33 Identities=27% Similarity=0.370 Sum_probs=30.1
Q ss_pred cEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|+|.|| |..|...+..|+++|++|+++.|...
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ 35 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 6999997 99999999999999999999998753
No 432
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=79.14 E-value=1 Score=46.18 Aligned_cols=31 Identities=39% Similarity=0.475 Sum_probs=29.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc-----C-CcEEEEEe
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL-----G-ADVTLIER 250 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~-----g-~~v~l~e~ 250 (704)
++|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999987
No 433
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.11 E-value=1.7 Score=44.67 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++...
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998754
No 434
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=78.97 E-value=2 Score=43.75 Aligned_cols=34 Identities=35% Similarity=0.496 Sum_probs=31.1
Q ss_pred CCcEEEEc-CCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVG-GGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG-~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++++|+| +|.+|..+|..|++.|.+|+++.|..
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 57899999 99999999999999999999998864
No 435
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=78.93 E-value=2.1 Score=40.37 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=31.0
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|+|+|| |..|...+..|.+.|++|+++.|...
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 57999998 99999999999999999999998754
No 436
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=78.92 E-value=1.7 Score=44.40 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=31.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 36799999999999999999999998 899998875
No 437
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=78.92 E-value=5 Score=41.90 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=30.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
....+|+|+|+|+.|+.++..+...|. +|+.+++.+
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~ 201 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRK 201 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCH
Confidence 446789999999999999888888898 799887654
No 438
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=78.80 E-value=1.7 Score=50.23 Aligned_cols=103 Identities=20% Similarity=0.199 Sum_probs=74.0
Q ss_pred CCCcEEEEc--CCHHHHHHHHHHHHcCCcEEEEEeCccccccccchhHHHHHHhhccccccccccCCcccccCcchhhhh
Q 005273 218 RKPKVAVVG--GGPSGLFASLVLAELGADVTLIERGQAVEQRGRDIGALVVRRMLEMESNFCFGEGGAGTWSDGKLVTRI 295 (704)
Q Consensus 218 ~~~~v~vvG--~G~aGl~aA~~l~~~g~~v~l~e~~~~~~~~~~~~~~~~~~~~l~~~~n~~~g~gG~~~~sdg~l~~~~ 295 (704)
..++|+||| +|..|+++|..|++.|.+|+++++.+.+......
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~----------------------------------- 566 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNN----------------------------------- 566 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGG-----------------------------------
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccccc-----------------------------------
Confidence 356899999 9999999999999999999999998764210000
Q ss_pred ccCchhHHHHHHHHHHcCCCceeecCCccccCCCChHHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCC
Q 005273 296 GRNSNSVLAVMNTLVHFGAPANILVDGKSHLGTDRLIPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKD 375 (704)
Q Consensus 296 ~~~~~~~~~~l~~l~~~G~~~~~~~~g~~~~g~~~~~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~ 375 (704)
. .+...+.+.+++.||+++++++|+++.. +.+ .+......
T Consensus 567 --------------------------------~----~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~-~v~~~~~~- 606 (690)
T 3k30_A 567 --------------------------------T----FEVNRIQRRLIENGVARVTDHAVVAVGA--GGV-TVRDTYAS- 606 (690)
T ss_dssp --------------------------------G----TCHHHHHHHHHHTTCEEEESEEEEEEET--TEE-EEEETTTC-
T ss_pred --------------------------------c----hhHHHHHHHHHHCCCEEEcCcEEEEEEC--CeE-EEEEccCC-
Confidence 0 0234566778889999999999999853 322 22222111
Q ss_pred CCCCceeEEecCeEEEcCCCChHH
Q 005273 376 NSQSDIQKLGFDAVILAVGHSARD 399 (704)
Q Consensus 376 ~~~~~~~~i~Ad~VVlAtG~~s~~ 399 (704)
+..++.+|.||+|+|..++.
T Consensus 607 ----~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 607 ----IERELECDAVVMVTARLPRE 626 (690)
T ss_dssp ----CEEEEECSEEEEESCEEECC
T ss_pred ----eEEEEECCEEEECCCCCCCh
Confidence 12579999999999987653
No 439
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=78.73 E-value=1.9 Score=44.02 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 35789999999999999999999996 899998875
No 440
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.68 E-value=1.5 Score=44.21 Aligned_cols=33 Identities=30% Similarity=0.261 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 34 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQS 34 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 689999999999999999999999999988753
No 441
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=78.48 E-value=1.6 Score=45.07 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=30.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
++|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999997 899999764
No 442
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.46 E-value=1.2 Score=48.26 Aligned_cols=35 Identities=37% Similarity=0.465 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+..|||.|..|+..|..|++.|++|+++|+.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 46789999999999999999999999999999864
No 443
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.39 E-value=1.8 Score=43.52 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|.|+|..|...+..|.++|++|+++.|...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 36899999999999999999999999999998754
No 444
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=78.38 E-value=1.4 Score=45.53 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEEeCc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG--ADVTLIERGQ 252 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g--~~v~l~e~~~ 252 (704)
++|.|||+|..|...|..|++.| ++|+++++..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7899999875
No 445
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=78.27 E-value=1.5 Score=43.82 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELG-ADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~~ 253 (704)
+|.|||+|..|...|..|++.| ++|+++++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~ 35 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAE 35 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHH
Confidence 6899999999999999999999 99999988753
No 446
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=78.24 E-value=1.8 Score=45.36 Aligned_cols=35 Identities=29% Similarity=0.592 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 5789999999999999999999997 6888987653
No 447
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=78.20 E-value=1.8 Score=43.91 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
..++++|+|+|.+|..+|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 36789999999999999999999996 899998864
No 448
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.05 E-value=1.7 Score=46.99 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++.|+|||.|.+|..+|..|...|.+|+++|+.+.
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ 254 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPI 254 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 468999999999999999999999999999998753
No 449
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.05 E-value=1.4 Score=45.21 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999996 7899987653
No 450
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.04 E-value=1.6 Score=48.19 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+++|+|||.|..|..+|..|...|.+|+++|+.+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467999999999999999999999999999998754
No 451
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=77.99 E-value=1.5 Score=50.82 Aligned_cols=36 Identities=19% Similarity=0.197 Sum_probs=32.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..++|.|||+|..|...|..+++.|++|+++|+.+.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 346899999999999999999999999999998864
No 452
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=77.94 E-value=0.1 Score=56.31 Aligned_cols=84 Identities=11% Similarity=0.031 Sum_probs=55.5
Q ss_pred hHHHHHHh---hhcc--cccccccccceEeecccccCCCCCCCCcccchHHHHHHHHHHcCCCCCC---CC-hhhHHHHH
Q 005273 55 KKKLKQKH---KQVL--NDVNNKFEGFWRLSKLAVPVHKDPGKDFIGVSHALLDEITKVLQFPVAS---ML-PAEAFTVV 125 (704)
Q Consensus 55 ~~~~~~~~---~~~~--~d~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~l~~~i~k~~~ipv~~---~~-p~~a~~i~ 125 (704)
...|.+++ ++.+ +|++|++.|.+.. +...+ + ++..+..+.+++.+++|++. +. ++.|.+++
T Consensus 263 ~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~-~~~~~----~-----~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i 332 (407)
T 3tjl_A 263 FSYLVHELQQRADKGQGIAYISVVEPRVSG-NVDVS----E-----EDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTL 332 (407)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEECTTEET-TEECC----G-----GGCCCCSHHHHHHCCSEEEEESCGGGGTTTTHHH
T ss_pred HHHHHHHHHhHhhcCCceeEEEEEccccCC-CCcCC----c-----cchhHHHHHHHHHhCCCEEecCCCCCHHHHHHHH
Confidence 35566666 6678 9999999875432 11111 1 11123456788999999964 55 44466666
Q ss_pred h----cccc----cccccCCCeEEEEEEEee
Q 005273 126 R----KSFD----ARKVLKEPKFVYTVDMDV 148 (704)
Q Consensus 126 ~----~~~D----aR~~ladp~~~~kv~~~~ 148 (704)
+ ..+| +|..|+||+|+.++..+.
T Consensus 333 ~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~ 363 (407)
T 3tjl_A 333 KEDIADKRTLVGFSRYFTSNPNLVWKLRDGI 363 (407)
T ss_dssp HHHHTTSSEEEECSHHHHHCTTHHHHHHHTC
T ss_pred HhhccCCCeEEEeChhhhhCchHHHHHHcCC
Confidence 4 4488 999999999998776664
No 453
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=77.93 E-value=1.1 Score=43.63 Aligned_cols=35 Identities=20% Similarity=0.267 Sum_probs=30.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEE-EEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTL-IERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l-~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|++ +++...
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 36899999999999999999999999998 777643
No 454
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=77.93 E-value=2.2 Score=43.64 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.0
Q ss_pred CCcEEEEc-CCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVG-GGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG-~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|.||| .|..|...|..|++.|++|+++++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35899999 99999999999999999999998765
No 455
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=77.87 E-value=1.5 Score=45.09 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
++|.|||+|..|...|+.|+..|+ +|+|+|..+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 369999999999999999999998 8999998753
No 456
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=77.76 E-value=1.7 Score=45.34 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=31.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
...+|+|||+|..|...|+.|+..|+ +++|+|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 35789999999999999999999887 899999864
No 457
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.74 E-value=1.5 Score=45.48 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG-ADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g-~~v~l~e~~~ 252 (704)
.++|.|||.|..|...|..|++.| ++|+++++..
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 367999999999999999999999 9999999875
No 458
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.54 E-value=1.9 Score=45.01 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
..+|.|||+|..|...|+.++..|+ +++++|....
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~ 57 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMED 57 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHH
Confidence 4789999999999999999999997 8999998653
No 459
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=77.36 E-value=2.2 Score=45.41 Aligned_cols=35 Identities=20% Similarity=0.529 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.+++|+|||+|..|..+|..+.+.|++|++++...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 35789999999999999999999999999998764
No 460
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.17 E-value=1.8 Score=43.78 Aligned_cols=34 Identities=21% Similarity=0.122 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.|+ +|+++++...
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~ 37 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 37 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHH
Confidence 479999999999999999999998 8999988753
No 461
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=77.17 E-value=1.9 Score=45.63 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=31.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
..++|+|+|.|..|..+|..|.+.|.+|++.|+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4688999999999999999999999999988765
No 462
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=77.16 E-value=1.7 Score=43.49 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=30.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4689999999999999999999997 6889887643
No 463
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=77.04 E-value=1.5 Score=44.42 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++|+|||+|.+|...|..|.+.|.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998874
No 464
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=76.99 E-value=2.6 Score=42.28 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
+++|||+|.+|..++..|++.|. +|+++.|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 89999999999999999999998 8999998753
No 465
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=76.80 E-value=2.1 Score=44.49 Aligned_cols=35 Identities=26% Similarity=0.313 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|.|||+|..|...|..|+..|+ +++++|....
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3689999999999999999999988 9999998753
No 466
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=76.77 E-value=1.5 Score=44.79 Aligned_cols=33 Identities=15% Similarity=0.306 Sum_probs=29.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.++++|+|+|.+|..+|..|++.| +|+++.|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 568999999999999999999999 999998764
No 467
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=76.72 E-value=1.6 Score=48.20 Aligned_cols=35 Identities=29% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|+..|..|++. |++|+++++.+.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 35899999999999999999998 799999998653
No 468
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=76.68 E-value=8 Score=40.11 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=29.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEEeCc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAEL-GADVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~-g~~v~l~e~~~ 252 (704)
.....|+|+|+|+.|+.++..+... |.+|+.+++.+
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~ 206 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDD 206 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 3467899999999999988777666 78899998764
No 469
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=76.51 E-value=1.8 Score=43.96 Aligned_cols=33 Identities=18% Similarity=0.138 Sum_probs=30.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+|.|||.|..|...|..|++.|++|+++++...
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999988753
No 470
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=76.47 E-value=1 Score=47.62 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 221 KVAVVGGGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 221 ~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 471
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=76.33 E-value=1.6 Score=48.04 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAEL--GADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~--g~~v~l~e~~~~ 253 (704)
++|.|||.|..|+..|..|++. |++|+++++...
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999999 899999998753
No 472
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=76.32 E-value=2.5 Score=44.88 Aligned_cols=35 Identities=17% Similarity=0.473 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|+|||+|..|...+..+.+.|++|++++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57899999999999999999999999999987643
No 473
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=76.24 E-value=1.7 Score=44.30 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999988753
No 474
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=76.23 E-value=2.2 Score=44.96 Aligned_cols=35 Identities=34% Similarity=0.566 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~~ 253 (704)
..+|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4689999999999999999999997 6999997653
No 475
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.19 E-value=1.9 Score=44.70 Aligned_cols=35 Identities=20% Similarity=0.105 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
.++|.|||.|..|...|..|++.|+ +|+++++.+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 3689999999999999999999999 9999998753
No 476
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=76.16 E-value=1.6 Score=44.37 Aligned_cols=34 Identities=26% Similarity=0.273 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.|++|+++++...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 4799999999999999999999999999988753
No 477
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=76.01 E-value=2.5 Score=42.81 Aligned_cols=34 Identities=35% Similarity=0.466 Sum_probs=30.9
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|+|.|| |..|-..+..|.++|++|+++.|.+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999998 99999999999999999999998754
No 478
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.96 E-value=5 Score=42.86 Aligned_cols=36 Identities=39% Similarity=0.608 Sum_probs=30.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
.....|+|+|+|+.|+.++..+...|. +|+.+++.+
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 248 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSE 248 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 446789999999999999888888999 788887654
No 479
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.75 E-value=2.5 Score=43.69 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=30.7
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 217 TRKPKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 217 ~~~~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.+.++|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 44678999998 99999999999999999999998753
No 480
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=75.69 E-value=2.3 Score=44.57 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.++|.|||.|..|-+.|..|.+.|++|+++++.+.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998754
No 481
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.61 E-value=0.96 Score=44.42 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=30.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+|+|+|+|..|...|..|.+.|+ |+++|+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4689999999999999999999999 999998754
No 482
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=75.59 E-value=1.9 Score=46.34 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=31.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA-DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~~ 252 (704)
.+++|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 36789999999999999999999998 899998864
No 483
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=75.57 E-value=2.1 Score=49.83 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=34.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCccc
Q 005273 217 TRKPKVAVVGGGPSGLFASLVLAELGADVTLIERGQAV 254 (704)
Q Consensus 217 ~~~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~~ 254 (704)
..-++|.|||+|..|-..|..++..|++|+|+|..+..
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~ 351 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQ 351 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhh
Confidence 34579999999999999999999999999999988653
No 484
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=75.55 E-value=2.4 Score=44.33 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=31.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~ 252 (704)
...+|.|||+|..|...|+.|+.+|+ +++|+|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 35789999999999999999999997 899999864
No 485
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=75.40 E-value=2.1 Score=43.45 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=31.1
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGG-GPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+ |..|...|..|++.|++|+++++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE 46 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 58999999 99999999999999999999988753
No 486
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=75.34 E-value=1.9 Score=44.53 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=30.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEEeC
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGA-DVTLIERG 251 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~-~v~l~e~~ 251 (704)
.++|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999986
No 487
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=75.33 E-value=1.6 Score=46.30 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-------CcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELG-------ADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g-------~~v~l~e~~~~ 253 (704)
.++|.|||+|..|...|..|++.| ++|+++++...
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 357999999999999999999999 99999998754
No 488
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=75.33 E-value=1.8 Score=47.64 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
+++|.|||.|..|...|..|++.|++|+++++...
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 489
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=75.22 E-value=1.8 Score=43.72 Aligned_cols=33 Identities=27% Similarity=0.200 Sum_probs=29.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++ |++|+++++...
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 469999999999999999999 999999988753
No 490
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=75.20 E-value=1.7 Score=47.53 Aligned_cols=55 Identities=11% Similarity=0.196 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHC--------CCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCC
Q 005273 333 PLLRNFRQHLQRL--------GVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHS 396 (704)
Q Consensus 333 ~l~~~L~~~l~~~--------Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~ 396 (704)
.+++.|.+.+.+. |++|+++++|++|..+++++. |++.++ .++.||.||+|++.+
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~g--------~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTEDN--------SVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETTS--------CEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECCC--------CEEEcCEEEEecCHH
Confidence 4677777776554 689999999999998887765 666654 368999999999853
No 491
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=74.93 E-value=6 Score=41.04 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=31.2
Q ss_pred CCCCcEEEEcCC-HHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 217 TRKPKVAVVGGG-PSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 217 ~~~~~v~vvG~G-~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
.....|+|+|+| +.|+.++..+...|.+|+++++.+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 180 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK 180 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 346789999987 9999999888889999999987653
No 492
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=74.86 E-value=1.4 Score=46.25 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC-------CcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG-------ADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g-------~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.| ++|+++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 57999999999999999999999 99999998765
No 493
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=74.81 E-value=1.6 Score=48.32 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=31.0
Q ss_pred CCCcEEEEcCCHHHHH-HHHHHHHcCCcEEEEEeCc
Q 005273 218 RKPKVAVVGGGPSGLF-ASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 218 ~~~~v~vvG~G~aGl~-aA~~l~~~g~~v~l~e~~~ 252 (704)
..++|.|||.|.+||+ +|..|.++|++|++.|...
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3578999999999997 6999999999999999764
No 494
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=74.72 E-value=2.2 Score=47.20 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHCCCEEEeCeEEEEEEEeCCEEEEEEEcCCCCCCCCceeEEecCeEEEcCCCCh
Q 005273 332 IPLLRNFRQHLQRLGVTIKFGTRVDDLLIENARIVGVKVSDSKDNSQSDIQKLGFDAVILAVGHSA 397 (704)
Q Consensus 332 ~~l~~~L~~~l~~~Gv~i~~~t~V~~i~~~~g~v~GV~~~~~~~~~~~~~~~i~Ad~VVlAtG~~s 397 (704)
..+.+.|.+.+ |++|+++++|++|..+++++. |.+.++ ..+.||.||+|++...
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~v~-v~~~~g--------~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDLL---GDRVKLERPVIYIDQTRENVL-VETLNH--------EMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHHH---GGGEESSCCEEEEECSSSSEE-EEETTS--------CEEEESEEEECSCGGG
T ss_pred HHHHHHHHHHc---CCcEEcCCeeEEEEECCCeEE-EEECCC--------eEEEeCEEEECCCHHH
Confidence 35666666544 789999999999988777665 666554 3689999999999754
No 495
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.58 E-value=7.1 Score=40.29 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=31.2
Q ss_pred CCCCcEEEEc-CCHHHHHHHHHHHHcCCcEEEEEeCc
Q 005273 217 TRKPKVAVVG-GGPSGLFASLVLAELGADVTLIERGQ 252 (704)
Q Consensus 217 ~~~~~v~vvG-~G~aGl~aA~~l~~~g~~v~l~e~~~ 252 (704)
.....|+|+| +|+.|+.++..+...|.+|+++++.+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3467899999 79999999998888999999998754
No 496
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.46 E-value=2.2 Score=42.55 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCCcEEEEcC-C-HHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 218 RKPKVAVVGG-G-PSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 218 ~~~~v~vvG~-G-~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+.++|.|| | -.|...|..|+++|++|+++.+...
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~ 58 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER 58 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH
Confidence 3578999998 7 5999999999999999999998753
No 497
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=74.44 E-value=2.2 Score=44.20 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=30.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELGA--DVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g~--~v~l~e~~~~ 253 (704)
++|.|||+|..|...|+.|+..|+ +++++|....
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 369999999999999999999887 8999998753
No 498
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=74.44 E-value=2.4 Score=42.21 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC----CcEEEEEeCcc
Q 005273 220 PKVAVVGGGPSGLFASLVLAELG----ADVTLIERGQA 253 (704)
Q Consensus 220 ~~v~vvG~G~aGl~aA~~l~~~g----~~v~l~e~~~~ 253 (704)
++|.|||+|..|...|..|++.| ++|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 79999988753
No 499
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=74.27 E-value=6.7 Score=42.65 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEEeC
Q 005273 217 TRKPKVAVVGG-GPSGLFASLVLAELGADVTLIERG 251 (704)
Q Consensus 217 ~~~~~v~vvG~-G~aGl~aA~~l~~~g~~v~l~e~~ 251 (704)
+....|+|+|+ |+.|+.++..+...|.+|+++.+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECC
Confidence 34578999998 999999998888899999888764
No 500
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=74.00 E-value=2.6 Score=46.62 Aligned_cols=35 Identities=23% Similarity=0.213 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEEeCcc
Q 005273 219 KPKVAVVGGGPSGLFASLVLAELGADVTLIERGQA 253 (704)
Q Consensus 219 ~~~v~vvG~G~aGl~aA~~l~~~g~~v~l~e~~~~ 253 (704)
..+|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
Done!