BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005274
(704 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 317 SEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFG 365
+EV D Y+ YC LL G D H NL + +GKL +IDFG
Sbjct: 528 AEVMDTYIKSCAGYCVITYLLGVG----DRHLDNLLLTTNGKLFHIDFG 572
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 317 SEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFG 365
+EV D Y+ YC +L G D H NL + GKL +IDFG
Sbjct: 440 AEVMDTYVKSCAGYCVITYILGVG----DRHLDNLLLTKTGKLFHIDFG 484
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 317 SEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFG 365
+EV D Y+ YC +L G D H NL + GKL +IDFG
Sbjct: 454 AEVMDTYVKSCAGYCVITYILGVG----DRHLDNLLLTKTGKLFHIDFG 498
>pdb|2FL8|A Chain A, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|B Chain B, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|C Chain C, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|D Chain D, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|E Chain E, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|F Chain F, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|G Chain G, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|H Chain H, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|I Chain I, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|J Chain J, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|K Chain K, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|L Chain L, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|M Chain M, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|N Chain N, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|O Chain O, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|P Chain P, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|Q Chain Q, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL8|R Chain R, Fitting Of The Gp10 Trimer Structure Into The Cryoem Map
Of The Bacteriophage T4 Baseplate In The Hexagonal
Conformation.
pdb|2FL9|A Chain A, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|B Chain B, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|C Chain C, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|D Chain D, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|E Chain E, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|F Chain F, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|G Chain G, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|H Chain H, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|I Chain I, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|J Chain J, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|K Chain K, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|L Chain L, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|M Chain M, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|N Chain N, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|O Chain O, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|P Chain P, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|Q Chain Q, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
pdb|2FL9|R Chain R, Evolution Of Bacteriophage Tails: Structure Of T4 Gene
Product 10
Length = 602
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 165 ITPFSSEVAFNTIEQEL----GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVK 220
I P S EV FN I QEL G+P+ S + V + LG ++ QS +V+
Sbjct: 304 INPNSLEVRFNGILQELAGTVGMPLFHCVGADSDDEVECSVLGGTWE----QSHTDYSVE 359
Query: 221 VQRPGVQAAISLDIFILHFIAGLIRKARKFNTDL 254
G+ + D H G I FN DL
Sbjct: 360 TDENGIPEILHFDSVFEH---GDIINITWFNNDL 390
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
Query: 299 EQTTR-KVLIMEWVEGQKLSEV------------KDLYLIEVGVYCSFNQLLEKGFYHAD 345
E TTR KVLIME+ L V + ++ V N L E G H +
Sbjct: 78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN 137
Query: 346 PHPGNLFR--SYDGKLAY--IDFGMMGEFKEE 373
PGN+ R DG+ Y DFG E +++
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
Query: 299 EQTTR-KVLIMEWVEGQKLSEV------------KDLYLIEVGVYCSFNQLLEKGFYHAD 345
E TTR KVLIME+ L V + ++ V N L E G H +
Sbjct: 78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRN 137
Query: 346 PHPGNLFR--SYDGKLAY--IDFGMMGEFKEE 373
PGN+ R DG+ Y DFG E +++
Sbjct: 138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 296 MYVEQTTRKV-LIMEWVEGQKL-----------SEVKDLYLIEVGVYCSFNQLLEKGFYH 343
+Y QT K+ LI+E++ G +L + YL E+ + + L +KG +
Sbjct: 87 IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM--ALGHLHQKGIIY 144
Query: 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFI 379
D P N+ ++ G + DFG+ KE + +G +
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLC---KESIHDGTV 177
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 296 MYVEQTTRKV-LIMEWVEGQKL-----------SEVKDLYLIEVGVYCSFNQLLEKGFYH 343
+Y QT K+ LI+E++ G +L + YL E+ + + L +KG +
Sbjct: 87 IYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM--ALGHLHQKGIIY 144
Query: 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFI 379
D P N+ ++ G + DFG+ KE + +G +
Sbjct: 145 RDLKPENIMLNHQGHVKLTDFGLC---KESIHDGTV 177
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLE 338
G+ +V P+ +E+ ++ME ++ LS+V + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHERMSYLL-YQMLCGIKHLHS 144
Query: 339 KGFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLE 338
G+ +V P+ +E+ ++ME ++ LS+V + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHERMSYLL-YQMLCGIKHLHS 144
Query: 339 KGFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 47/184 (25%)
Query: 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFN 251
+SP V + + G V A ++SG VA+K + +R F
Sbjct: 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIK------------------------KLSRPFQ 62
Query: 252 TDLQAVVDEWASSLFRELDY--KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIME 309
+++ +A +REL ++ +N + G+ DV P + L+M
Sbjct: 63 SEI------FAKRAYRELLLLKHMQHENVI-------GLLDVFTPASSLRNFYDFYLVMP 109
Query: 310 WVE-------GQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYI 362
+++ G K SE K YL+ + + G H D PGNL + D +L +
Sbjct: 110 FMQTDLQKIMGLKFSEEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL 168
Query: 363 DFGM 366
DFG+
Sbjct: 169 DFGL 172
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLE 338
G+ +V P+ +E+ ++ME ++ LS+V + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHERMSYLL-YQMLCGIKHLHS 144
Query: 339 KGFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 47/184 (25%)
Query: 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFN 251
+SP V + + G V A ++SG VA+K + +R F
Sbjct: 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIK------------------------KLSRPFQ 80
Query: 252 TDLQAVVDEWASSLFRELDY--KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIME 309
+++ +A +REL ++ +N + G+ DV P + L+M
Sbjct: 81 SEI------FAKRAYRELLLLKHMQHENVI-------GLLDVFTPASSLRNFYDFYLVMP 127
Query: 310 WVE-------GQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYI 362
+++ G + SE K YL+ + + G H D PGNL + D +L +
Sbjct: 128 FMQTDLQKIMGMEFSEEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL 186
Query: 363 DFGM 366
DFG+
Sbjct: 187 DFGL 190
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 145
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 147
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 145
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 103 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 162
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 163 RVKLSDFGFCAQVSKEV 179
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 145
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 145
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 145
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 150
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 105 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 165 RVKLSDFGFCAQVSKEV 181
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 94 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 153
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 154 RVKLSDFGFCAQVSKEV 170
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 146
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 225 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 285 RVKLSDFGFCAQVSKEV 301
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 98 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 157
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 158 RVKLSDFGFCAQVSKEV 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEK 339
G+ +V P+ +E+ ++ME ++ +L + YL+ + C L
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSA 139
Query: 340 GFYHADPHPGNLFRSYDGKLAYIDFGM 366
G H D P N+ D L +DFG+
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 287 GIQDVLIPEMYVEQTTRKVLIMEWV--------EGQKLSEVKDLYLIEVGVYCSFNQLLE 338
G+ DV P+ ++ T L+M ++ + +KL E + +L+ + +
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV-YQMLKGLRYIHA 146
Query: 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL 374
G H D PGNL + D +L +DFG+ + E+
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM 182
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 309 EWVEGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFG-MM 367
E+ G L + + + YC + +L G H+D N+ G+L +IDFG ++
Sbjct: 909 EYNSGDDLDRAIEEFTLSCAGYCVASYVLGIGDRHSD----NIMVKKTGQLFHIDFGHIL 964
Query: 368 GEFK 371
G FK
Sbjct: 965 GNFK 968
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ ++DG
Sbjct: 148 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 207
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 208 RVKLSDFGFCAQVSKEV 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 296 MYVE-QTTRKVLIMEWVEGQKLSEVKDLYLIEVGVYCSFNQLLE----KGFYHADPHPGN 350
+Y++ Q RK + +W+ G+ E ++ + + ++ + +E KG H D P N
Sbjct: 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVC-LHIFLQIAEAVEFLHSKGLMHRDLKPSN 148
Query: 351 LFRSYDGKLAYIDFGMMGEFKEELRE 376
+F + D + DFG++ ++ E
Sbjct: 149 IFFTMDDVVKVGDFGLVTAMDQDEEE 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 88 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL-YQMLCGIKHLHSAGII 146
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 186
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 149
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLL-YQMLCGIKHLHSAGII 148
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 148
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 147
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 148
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 149
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2VFB|A Chain A, The Structure Of Mycobacterium Marinum Arylamine N-
Acetyltransferase
pdb|2VFC|A Chain A, The Structure Of Mycobacterium Marinum Arylamine N-
Acetyltransferase In Complex With Coa
pdb|2VFC|B Chain B, The Structure Of Mycobacterium Marinum Arylamine N-
Acetyltransferase In Complex With Coa
pdb|3LTW|A Chain A, The Structure Of Mycobacterium Marinum Arylamine
N-Acetyltransferase In Complex With Hydralazine
Length = 280
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 158 LSLLQDQITPFSSEVAFNTIEQELGLPIDELFSE 191
L +L+D ++ + +AF ++ +G+P+D+L +E
Sbjct: 22 LDVLRDLVSAHTGAIAFENLDPLMGVPVDDLSAE 55
>pdb|4B55|A Chain A, Crystal Structure Of The Covalent Adduct Formed Between
Mycobacterium Marinum Aryalamine N-acetyltransferase And
Phenyl Vinyl Ketone A Derivative Of Piperidinols
Length = 283
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 23/34 (67%)
Query: 158 LSLLQDQITPFSSEVAFNTIEQELGLPIDELFSE 191
L +L+D ++ + +AF ++ +G+P+D+L +E
Sbjct: 25 LDVLRDLVSAHTGAIAFENLDPLMGVPVDDLSAE 58
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 142
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 148
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 186
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 142
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 141
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371
H D P NL DG + DFG+ EFK
Sbjct: 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 290 DVLIPEMYVEQTTRKVLIMEWVEGQ-------KLSEVKDLYLIEVGVYCSFNQLLEKGFY 342
+V P+ +E+ L+ME ++ +L + YL+ + C L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGII 148
Query: 343 HADPHPGNLFRSYDGKLAYIDFGM 366
H D P N+ D L +DFG+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2ZFN|A Chain A, Self-Acetylation Mediated Histone H3 Lysine 56 Acetylation
By Rtt109
Length = 460
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 189 FSEISPEPVAAASLG----QVYQARLRQSGRVVAVKVQRPGVQAAISLDIF----ILHFI 240
+ +ISPE ++AAS ++ RL+QSG V +++ P Q + L IL I
Sbjct: 154 YKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTCPREILTKI 213
Query: 241 AGLIRKARKFNTDLQAVVDEWASSLFRE--LDYKIEAKNGLKFRQLYGGIQDVLIPEMYV 298
R A ++ LF + + K NG + + +G I D L+ E +
Sbjct: 214 CLFTRPASQY--------------LFPDSSKNSKKHILNGEELXKWWGFILDRLLIECFQ 259
Query: 299 EQTTRKVLI 307
T K+ I
Sbjct: 260 NDTQAKLRI 268
>pdb|2RIM|A Chain A, Crystal Structure Of Rtt109
Length = 457
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 189 FSEISPEPVAAASLG----QVYQARLRQSGRVVAVKVQRPGVQAAISLDIF----ILHFI 240
+ +ISPE ++AAS ++ RL+QSG V +++ P Q + L IL I
Sbjct: 151 YKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTCPREILTKI 210
Query: 241 AGLIRKARKFNTDLQAVVDEWASSLFRE--LDYKIEAKNGLKFRQLYGGIQDVLIPEMYV 298
R A ++ LF + + K NG + + +G I D L+ E +
Sbjct: 211 CLFTRPASQY--------------LFPDSSKNSKKHILNGEELXKWWGFILDRLLIECFQ 256
Query: 299 EQTTRKVLI 307
T K+ I
Sbjct: 257 NDTQAKLRI 265
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 10/84 (11%)
Query: 306 LIMEWVEGQKLSEV---------KDLYLIEVGVYCSFNQLLEKG-FYHADPHPGNLFRSY 355
+ ME ++G L +V + L + + V L EK H D P N+ +
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 143
Query: 356 DGKLAYIDFGMMGEFKEELREGFI 379
G++ DFG+ G+ +E+ F+
Sbjct: 144 RGEIKLCDFGVSGQLIDEMANEFV 167
>pdb|3Q66|C Chain C, Structure Of The Vps75-Rtt109 Histone Chaperone-Lysine
Acetyltransferase Complex (Full-Length Proteins In Space
Group P6122)
pdb|3Q68|C Chain C, Structure Of The Vps75-Rtt109 Histone Chaperone-Lysine
Acetyltransferase Complex (Full-Length Proteins In Space
Group P212121)
Length = 442
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 189 FSEISPEPVAAASLG----QVYQARLRQSGRVVAVKVQRPGVQAAISLDIF----ILHFI 240
+ +ISPE ++AAS ++ RL+QSG V +++ P Q + L IL I
Sbjct: 136 YKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTCPREILTKI 195
Query: 241 AGLIRKARKFNTDLQAVVDEWASSLFRE--LDYKIEAKNGLKFRQLYGGIQDVLIPEMYV 298
R A ++ LF + + K NG + + +G I D L+ E +
Sbjct: 196 CLFTRPASQY--------------LFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQ 241
Query: 299 EQTTRKVLI 307
T K+ I
Sbjct: 242 NDTQAKLRI 250
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 289 QDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHP 348
QDV I ++ +V+ ME ++ +++S + LY + VG+ L G H D P
Sbjct: 102 QDVYIVMELMDANLSQVIQME-LDHERMSYL--LYQMLVGI----KHLHSAGIIHRDLKP 154
Query: 349 GNLFRSYDGKLAYIDFGM 366
N+ D L +DFG+
Sbjct: 155 SNIVVKSDATLKILDFGL 172
>pdb|3Q33|A Chain A, Structure Of The Rtt109-AccoaVPS75 COMPLEX AND
IMPLICATIONS FOR Chaperone-Mediated Histone Acetylation
pdb|3Q35|A Chain A, Structure Of The Rtt109-AccoaVPS75 COMPLEX AND
IMPLICATIONS FOR Chaperone-Mediated Histone Acetylation
Length = 438
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 189 FSEISPEPVAAASLG----QVYQARLRQSGRVVAVKVQRPGVQAAISLDIF----ILHFI 240
+ +ISPE ++AAS ++ RL+QSG V +++ P Q + L IL I
Sbjct: 132 YKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTCPREILTKI 191
Query: 241 AGLIRKARKFNTDLQAVVDEWASSLFRE--LDYKIEAKNGLKFRQLYGGIQDVLIPEMYV 298
R A ++ LF + + K NG + + +G I D L+ E +
Sbjct: 192 CLFTRPASQY--------------LFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQ 237
Query: 299 EQTTRKVLI 307
T K+ I
Sbjct: 238 NDTQAKLRI 246
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 289 QDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHP 348
QDV I ++ +V+ ME ++ +++S + LY + VG+ L G H D P
Sbjct: 102 QDVYIVMELMDANLSQVIQME-LDHERMSYL--LYQMLVGI----KHLHSAGIIHRDLKP 154
Query: 349 GNLFRSYDGKLAYIDFGM 366
N+ D L +DFG+
Sbjct: 155 SNIVVKSDATLKILDFGL 172
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 289 QDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHP 348
QDV I ++ +V+ ME ++ +++S + LY + VG+ L G H D P
Sbjct: 102 QDVYIVMELMDANLSQVIQME-LDHERMSYL--LYQMLVGI----KHLHSAGIIHRDLKP 154
Query: 349 GNLFRSYDGKLAYIDFGM 366
N+ D L +DFG+
Sbjct: 155 SNIVVKSDATLKILDFGL 172
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 312 EGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371
+G L+E + L+L+ +G+ + KG+ H D P N+ +G+ +D G M
Sbjct: 127 KGNFLTEDQILWLL-LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN--- 182
Query: 372 EELREGFIEACLHL 385
+AC+H+
Sbjct: 183 --------QACIHV 188
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 306 LIMEWVEGQKLSEV---------KDLYLIEVGVYCSFNQLLEKG-FYHADPHPGNLFRSY 355
+ ME ++G L +V + L + + V L EK H D P N+ +
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 202
Query: 356 DGKLAYIDFGMMGEFKEELREGFI 379
G++ DFG+ G+ + + F+
Sbjct: 203 RGEIKLCDFGVSGQLIDSMANSFV 226
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 306 LIMEWVEGQKLSEV--------KDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357
++ME++EG L+++ + + + + V + + L +G H D ++ + DG
Sbjct: 119 VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG 178
Query: 358 KLAYIDFGMMGEFKEEL 374
++ DFG + +E+
Sbjct: 179 RIKLSDFGFCAQVSKEV 195
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 307 IMEWVE----GQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYI 362
++ W++ G+ L + + + YC +L G D H N+ G+L +I
Sbjct: 745 LLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIG----DRHSDNIMIRESGQLFHI 800
Query: 363 DFG-MMGEFK 371
DFG +G FK
Sbjct: 801 DFGHFLGNFK 810
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 307 IMEWVE----GQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYI 362
++ W++ G+ L + + + YC +L G H+D N+ G+L +I
Sbjct: 751 LLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSD----NIMIRESGQLFHI 806
Query: 363 DFG-MMGEFK 371
DFG +G FK
Sbjct: 807 DFGHFLGNFK 816
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,204,099
Number of Sequences: 62578
Number of extensions: 716332
Number of successful extensions: 2274
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 2258
Number of HSP's gapped (non-prelim): 84
length of query: 704
length of database: 14,973,337
effective HSP length: 106
effective length of query: 598
effective length of database: 8,340,069
effective search space: 4987361262
effective search space used: 4987361262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)