Query 005274
Match_columns 704
No_of_seqs 628 out of 4239
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 20:51:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005274.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005274hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 1.3E-81 2.7E-86 706.3 42.5 481 70-571 4-496 (517)
2 PRK04750 ubiB putative ubiquin 100.0 2.2E-75 4.7E-80 660.0 42.6 378 120-497 50-441 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 4E-72 8.6E-77 625.2 42.6 378 119-497 47-434 (437)
4 KOG1235 Predicted unusual prot 100.0 4.8E-63 1E-67 553.8 31.2 294 122-418 94-402 (538)
5 KOG1236 Predicted unusual prot 100.0 6.8E-51 1.5E-55 431.9 28.3 363 122-484 121-553 (565)
6 KOG1234 ABC (ATP binding casse 100.0 8.5E-29 1.8E-33 251.9 14.9 312 148-462 8-334 (363)
7 KOG0660 Mitogen-activated prot 100.0 2.8E-28 6.2E-33 256.3 16.7 313 194-572 27-351 (359)
8 KOG0659 Cdk activating kinase 99.9 1.7E-27 3.6E-32 241.4 14.0 264 194-526 7-285 (318)
9 KOG0600 Cdc2-related protein k 99.9 6.1E-26 1.3E-30 246.4 12.9 279 180-525 110-403 (560)
10 KOG0581 Mitogen-activated prot 99.9 2.4E-25 5.2E-30 235.1 16.0 234 195-525 85-338 (364)
11 KOG0663 Protein kinase PITSLRE 99.9 1.8E-25 4E-30 232.4 12.9 266 188-526 77-365 (419)
12 KOG0593 Predicted protein kina 99.9 3.8E-25 8.2E-30 227.5 15.0 266 189-525 4-287 (396)
13 PF03109 ABC1: ABC1 family; I 99.9 8.5E-26 1.8E-30 209.3 8.6 118 179-297 1-119 (119)
14 KOG0594 Protein kinase PCTAIRE 99.9 1.7E-24 3.7E-29 228.1 13.6 268 187-525 11-305 (323)
15 KOG0658 Glycogen synthase kina 99.9 1.6E-24 3.4E-29 228.6 11.4 258 193-525 28-309 (364)
16 KOG0595 Serine/threonine-prote 99.9 1.9E-23 4.2E-28 222.6 17.7 138 195-373 16-168 (429)
17 KOG0661 MAPK related serine/th 99.9 1.4E-23 3E-28 226.8 12.5 271 187-525 10-294 (538)
18 KOG0615 Serine/threonine prote 99.9 2E-23 4.4E-28 222.2 13.2 244 194-525 177-440 (475)
19 KOG0598 Ribosomal protein S6 k 99.9 2E-23 4.3E-28 220.6 12.4 228 195-515 31-270 (357)
20 KOG0605 NDR and related serine 99.9 4E-23 8.6E-28 226.3 13.3 255 195-525 147-448 (550)
21 KOG0616 cAMP-dependent protein 99.9 5.8E-23 1.2E-27 211.2 13.2 168 195-403 50-230 (355)
22 KOG0575 Polo-like serine/threo 99.9 1.8E-22 3.8E-27 224.2 16.7 234 195-525 24-272 (592)
23 KOG0592 3-phosphoinositide-dep 99.9 1.2E-21 2.6E-26 214.6 17.1 253 195-526 79-342 (604)
24 KOG0597 Serine-threonine prote 99.9 9E-22 2E-26 215.6 14.4 231 195-524 8-253 (808)
25 KOG0583 Serine/threonine prote 99.9 2.4E-21 5.2E-26 212.5 16.9 238 194-525 22-278 (370)
26 KOG0662 Cyclin-dependent kinas 99.9 2.8E-22 6.1E-27 193.2 7.2 263 195-525 8-286 (292)
27 KOG0578 p21-activated serine/t 99.9 4.9E-21 1.1E-25 211.3 15.8 243 183-525 269-526 (550)
28 KOG0667 Dual-specificity tyros 99.9 3.3E-21 7.3E-26 215.9 14.7 171 194-404 191-378 (586)
29 KOG0588 Serine/threonine prote 99.8 1.4E-21 3.1E-26 217.8 9.6 234 195-525 18-266 (786)
30 KOG0694 Serine/threonine prote 99.8 6E-21 1.3E-25 214.2 12.9 231 195-516 374-613 (694)
31 cd05571 STKc_PKB Catalytic dom 99.8 1.7E-20 3.6E-25 201.2 14.7 239 196-525 2-254 (323)
32 KOG0201 Serine/threonine prote 99.8 3.9E-21 8.3E-26 206.5 8.2 243 183-525 9-266 (467)
33 cd07871 STKc_PCTAIRE3 Catalyti 99.8 7.4E-20 1.6E-24 192.5 17.1 260 195-524 11-287 (288)
34 cd05600 STKc_Sid2p_Dbf2p Catal 99.8 4.8E-20 1E-24 198.1 15.0 245 195-525 7-260 (333)
35 PLN00034 mitogen-activated pro 99.8 6.6E-20 1.4E-24 198.9 15.7 245 195-525 80-331 (353)
36 KOG0599 Phosphorylase kinase g 99.8 3.3E-20 7.2E-25 188.7 11.2 259 187-525 14-286 (411)
37 KOG0032 Ca2+/calmodulin-depend 99.8 6E-20 1.3E-24 201.9 14.2 242 195-525 41-296 (382)
38 cd05594 STKc_PKB_alpha Catalyt 99.8 1E-19 2.2E-24 195.1 15.2 135 196-370 2-146 (325)
39 cd05631 STKc_GRK4 Catalytic do 99.8 1.8E-19 3.8E-24 189.4 16.5 243 195-525 6-264 (285)
40 cd07848 STKc_CDKL5 Catalytic d 99.8 9.6E-20 2.1E-24 190.4 14.3 137 195-372 7-152 (287)
41 cd05593 STKc_PKB_gamma Catalyt 99.8 1.1E-19 2.4E-24 195.5 14.8 239 196-525 2-254 (328)
42 cd07869 STKc_PFTAIRE1 Catalyti 99.8 7.3E-20 1.6E-24 193.7 12.8 134 195-370 11-153 (303)
43 cd05590 STKc_nPKC_eta Catalyti 99.8 2E-19 4.4E-24 192.7 15.9 240 196-525 2-256 (320)
44 cd05599 STKc_NDR_like Catalyti 99.8 8.7E-20 1.9E-24 198.3 13.2 259 195-525 7-299 (364)
45 cd05612 STKc_PRKX_like Catalyt 99.8 2E-19 4.4E-24 189.6 15.5 138 195-372 7-153 (291)
46 KOG0198 MEKK and related serin 99.8 2.2E-19 4.9E-24 191.4 15.7 236 194-525 22-279 (313)
47 cd05626 STKc_LATS2 Catalytic d 99.8 2.2E-19 4.7E-24 197.2 15.8 136 195-370 7-151 (381)
48 cd05595 STKc_PKB_beta Catalyti 99.8 1.5E-19 3.3E-24 193.9 14.1 239 196-525 2-254 (323)
49 KOG0591 NIMA (never in mitosis 99.8 7.1E-20 1.5E-24 187.3 10.8 169 195-403 25-217 (375)
50 KOG0574 STE20-like serine/thre 99.8 7.3E-21 1.6E-25 195.3 3.0 185 172-403 18-218 (502)
51 cd05598 STKc_LATS Catalytic do 99.8 2.4E-19 5.3E-24 196.0 14.7 136 195-370 7-151 (376)
52 PTZ00263 protein kinase A cata 99.8 3.1E-19 6.7E-24 192.0 14.9 228 195-516 24-260 (329)
53 cd05592 STKc_nPKC_theta_delta 99.8 7E-19 1.5E-23 188.2 17.4 240 196-525 2-251 (316)
54 cd05627 STKc_NDR2 Catalytic do 99.8 3.9E-19 8.4E-24 193.5 15.6 138 195-372 7-153 (360)
55 cd05585 STKc_YPK1_like Catalyt 99.8 4E-19 8.7E-24 189.4 15.3 238 197-525 1-250 (312)
56 cd06649 PKc_MEK2 Catalytic dom 99.8 1.3E-18 2.8E-23 187.2 18.8 136 195-372 11-156 (331)
57 cd05588 STKc_aPKC Catalytic do 99.8 6.8E-19 1.5E-23 189.4 16.6 135 196-369 2-145 (329)
58 cd05591 STKc_nPKC_epsilon Cata 99.8 7.9E-19 1.7E-23 187.9 16.7 240 196-525 2-257 (321)
59 KOG4236 Serine/threonine prote 99.8 1.6E-19 3.4E-24 196.4 11.2 246 184-525 559-822 (888)
60 cd05629 STKc_NDR_like_fungal C 99.8 5.1E-19 1.1E-23 193.7 15.3 136 195-370 7-151 (377)
61 cd07874 STKc_JNK3 Catalytic do 99.8 5.9E-19 1.3E-23 191.3 15.7 274 195-525 23-314 (355)
62 cd05573 STKc_ROCK_NDR_like Cat 99.8 4E-19 8.6E-24 191.5 14.2 259 195-525 7-288 (350)
63 cd07875 STKc_JNK1 Catalytic do 99.8 6E-19 1.3E-23 192.1 15.7 273 195-525 30-321 (364)
64 PTZ00284 protein kinase; Provi 99.8 1.8E-18 3.8E-23 195.3 19.8 268 195-525 135-441 (467)
65 cd05145 RIO1_like RIO kinase f 99.8 8.4E-19 1.8E-23 174.9 15.1 172 195-394 3-184 (190)
66 cd07876 STKc_JNK2 Catalytic do 99.8 5.1E-19 1.1E-23 192.3 14.7 136 195-371 27-174 (359)
67 cd07878 STKc_p38beta_MAPK11 Ca 99.8 1.6E-18 3.5E-23 186.8 18.5 142 195-372 21-170 (343)
68 cd05625 STKc_LATS1 Catalytic d 99.8 4.6E-19 1E-23 194.4 14.4 136 195-370 7-151 (382)
69 PHA03212 serine/threonine kina 99.8 1.2E-18 2.5E-23 192.8 17.5 159 195-403 98-272 (391)
70 cd05620 STKc_nPKC_delta Cataly 99.8 9.5E-19 2.1E-23 187.2 16.3 240 196-525 2-251 (316)
71 cd05628 STKc_NDR1 Catalytic do 99.8 4.6E-19 9.9E-24 193.3 14.1 139 195-373 7-154 (363)
72 cd06650 PKc_MEK1 Catalytic dom 99.8 2.5E-18 5.3E-23 185.5 19.4 136 195-372 11-156 (333)
73 cd05618 STKc_aPKC_iota Catalyt 99.8 7.7E-19 1.7E-23 189.1 15.2 136 195-369 1-145 (329)
74 cd05096 PTKc_DDR1 Catalytic do 99.8 2.2E-18 4.7E-23 182.4 17.6 135 195-371 11-189 (304)
75 cd05601 STKc_CRIK Catalytic do 99.8 9E-19 2E-23 187.8 14.4 138 195-372 7-154 (330)
76 cd05614 STKc_MSK2_N N-terminal 99.8 2.3E-18 4.9E-23 184.9 17.3 245 195-525 6-270 (332)
77 cd05587 STKc_cPKC Catalytic do 99.8 1.5E-18 3.2E-23 186.0 15.9 232 195-516 6-246 (324)
78 cd05616 STKc_cPKC_beta Catalyt 99.8 1.4E-18 3E-23 186.1 15.6 232 195-516 6-246 (323)
79 cd05608 STKc_GRK1 Catalytic do 99.8 2.1E-18 4.5E-23 180.8 16.4 242 197-525 1-260 (280)
80 KOG4250 TANK binding protein k 99.8 1.2E-19 2.7E-24 204.2 7.5 150 189-374 13-178 (732)
81 cd07862 STKc_CDK6 Catalytic do 99.8 2.5E-18 5.4E-23 180.1 16.9 258 195-524 7-289 (290)
82 cd05617 STKc_aPKC_zeta Catalyt 99.8 2.3E-18 4.9E-23 185.2 16.7 135 196-369 2-145 (327)
83 cd05575 STKc_SGK Catalytic dom 99.8 1E-18 2.3E-23 187.1 13.9 240 196-525 2-254 (323)
84 KOG0585 Ca2+/calmodulin-depend 99.8 7.5E-19 1.6E-23 190.1 12.3 148 195-370 103-260 (576)
85 cd07863 STKc_CDK4 Catalytic do 99.8 3.3E-18 7.2E-23 178.7 16.8 261 195-524 6-287 (288)
86 PTZ00426 cAMP-dependent protei 99.8 1.6E-18 3.5E-23 187.9 14.6 237 195-525 36-287 (340)
87 KOG0577 Serine/threonine prote 99.8 6.2E-19 1.4E-23 193.9 11.3 251 182-525 21-281 (948)
88 cd05615 STKc_cPKC_alpha Cataly 99.8 2.2E-18 4.9E-23 184.9 15.2 232 195-516 6-246 (323)
89 PRK10359 lipopolysaccharide co 99.8 2E-18 4.4E-23 176.9 14.2 166 195-403 37-211 (232)
90 cd05147 RIO1_euk RIO kinase fa 99.8 1.4E-18 3E-23 173.8 12.6 158 195-373 3-170 (190)
91 cd07872 STKc_PCTAIRE2 Catalyti 99.8 6.3E-18 1.4E-22 179.5 18.4 262 195-526 12-290 (309)
92 cd05589 STKc_PKN Catalytic dom 99.8 2.5E-18 5.3E-23 184.3 14.8 233 195-515 5-245 (324)
93 cd05602 STKc_SGK1 Catalytic do 99.8 2.4E-18 5.1E-23 184.6 14.4 234 195-518 1-243 (325)
94 cd05584 STKc_p70S6K Catalytic 99.8 3.7E-18 8.1E-23 183.0 15.8 241 195-525 2-259 (323)
95 KOG0033 Ca2+/calmodulin-depend 99.8 9.9E-20 2.1E-24 183.0 3.2 245 186-526 10-271 (355)
96 KOG0580 Serine/threonine prote 99.8 1.1E-18 2.5E-23 175.2 10.8 235 194-525 27-276 (281)
97 cd05084 PTKc_Fes Catalytic dom 99.8 1E-17 2.2E-22 171.6 18.2 135 195-371 1-145 (252)
98 cd05586 STKc_Sck1_like Catalyt 99.8 4.4E-18 9.5E-23 182.7 16.1 137 197-370 1-146 (330)
99 cd07868 STKc_CDK8 Catalytic do 99.8 3.4E-18 7.4E-23 181.7 14.7 134 193-372 5-164 (317)
100 cd05582 STKc_RSK_N N-terminal 99.8 4.4E-18 9.5E-23 181.7 15.5 136 195-371 2-149 (318)
101 cd05603 STKc_SGK2 Catalytic do 99.8 2.8E-18 6.1E-23 183.5 13.8 231 196-517 2-242 (321)
102 cd05596 STKc_ROCK Catalytic do 99.8 3.3E-18 7.1E-23 187.5 14.5 249 195-525 49-307 (370)
103 PTZ00036 glycogen synthase kin 99.8 1.4E-17 3.1E-22 186.9 19.9 265 177-526 56-355 (440)
104 cd07859 STKc_TDY_MAPK_plant Ca 99.8 2.1E-17 4.5E-22 176.9 20.2 134 195-370 6-153 (338)
105 cd05604 STKc_SGK3 Catalytic do 99.8 4.2E-18 9.1E-23 182.6 14.8 135 196-369 2-145 (325)
106 cd05605 STKc_GRK4_like Catalyt 99.8 4.4E-18 9.5E-23 178.8 14.2 243 195-525 6-264 (285)
107 cd05597 STKc_DMPK_like Catalyt 99.8 1.4E-17 3E-22 179.3 18.3 251 195-525 7-269 (331)
108 cd05570 STKc_PKC Catalytic dom 99.8 7E-18 1.5E-22 180.5 15.8 135 196-369 2-145 (318)
109 cd05619 STKc_nPKC_theta Cataly 99.8 8.2E-18 1.8E-22 180.1 16.1 240 196-525 2-251 (316)
110 cd05607 STKc_GRK7 Catalytic do 99.8 8.9E-18 1.9E-22 175.7 15.9 242 197-525 1-257 (277)
111 KOG0664 Nemo-like MAPK-related 99.8 3.5E-18 7.5E-23 174.0 12.2 263 194-525 58-346 (449)
112 KOG0668 Casein kinase II, alph 99.8 1.8E-18 3.9E-23 172.6 9.5 258 195-528 44-328 (338)
113 cd05632 STKc_GRK5 Catalytic do 99.8 9.2E-18 2E-22 176.3 15.5 243 195-526 6-265 (285)
114 cd07861 STKc_CDK1_euk Catalyti 99.8 5.1E-18 1.1E-22 176.8 13.0 135 195-371 6-152 (285)
115 cd05630 STKc_GRK6 Catalytic do 99.8 1.4E-17 3.1E-22 175.0 16.4 241 195-525 6-264 (285)
116 cd07853 STKc_NLK Catalytic dom 99.8 2.8E-17 6E-22 179.7 19.0 267 195-525 6-291 (372)
117 cd05102 PTKc_VEGFR3 Catalytic 99.8 1.5E-17 3.2E-22 178.8 16.5 237 195-518 13-326 (338)
118 PF00069 Pkinase: Protein kina 99.7 2.2E-17 4.7E-22 169.0 16.6 134 195-369 5-147 (260)
119 PTZ00283 serine/threonine prot 99.7 2E-17 4.4E-22 188.5 18.0 242 195-525 38-300 (496)
120 cd07873 STKc_PCTAIRE1 Catalyti 99.7 9.1E-18 2E-22 177.4 14.1 134 195-371 12-155 (301)
121 KOG0589 Serine/threonine prote 99.7 3E-18 6.6E-23 187.7 10.7 234 195-525 10-261 (426)
122 cd06619 PKc_MKK5 Catalytic dom 99.7 1.8E-17 4E-22 173.1 16.2 245 195-525 7-256 (279)
123 cd07867 STKc_CDC2L6 Catalytic 99.7 1.6E-17 3.4E-22 176.3 15.7 134 193-372 5-164 (317)
124 cd07832 STKc_CCRK Catalytic do 99.7 1.4E-17 3E-22 173.4 14.9 136 195-372 6-151 (286)
125 cd05621 STKc_ROCK2 Catalytic d 99.7 2.4E-17 5.2E-22 180.8 17.6 249 195-525 49-307 (370)
126 PRK13184 pknD serine/threonine 99.7 8.4E-18 1.8E-22 200.1 14.0 257 195-523 8-286 (932)
127 cd05623 STKc_MRCK_alpha Cataly 99.7 4.3E-17 9.3E-22 175.5 18.2 251 195-525 7-269 (332)
128 PHA03207 serine/threonine kina 99.7 2.3E-17 5E-22 182.1 16.5 260 195-525 98-378 (392)
129 cd05624 STKc_MRCK_beta Catalyt 99.7 1.7E-17 3.7E-22 178.6 14.9 138 195-372 7-154 (331)
130 cd05609 STKc_MAST Catalytic do 99.7 2.9E-17 6.2E-22 174.1 16.3 256 195-525 7-276 (305)
131 cd06657 STKc_PAK4 Catalytic do 99.7 3.4E-17 7.3E-22 173.1 16.7 240 195-525 26-273 (292)
132 PTZ00267 NIMA-related protein 99.7 5.8E-17 1.3E-21 183.8 19.8 241 194-525 72-326 (478)
133 cd07839 STKc_CDK5 Catalytic do 99.7 1.7E-17 3.8E-22 172.9 14.1 135 195-371 6-150 (284)
134 cd06629 STKc_MAPKKK_Bck1_like 99.7 6.4E-17 1.4E-21 167.6 17.6 261 189-523 1-270 (272)
135 KOG0669 Cyclin T-dependent kin 99.7 3.1E-19 6.7E-24 180.1 0.2 142 195-372 23-176 (376)
136 cd05622 STKc_ROCK1 Catalytic d 99.7 6.7E-17 1.5E-21 177.3 18.6 247 195-524 49-306 (371)
137 PHA03211 serine/threonine kina 99.7 3E-17 6.4E-22 185.4 16.0 159 195-403 175-351 (461)
138 cd06625 STKc_MEKK3_like Cataly 99.7 1.2E-16 2.5E-21 164.4 19.0 246 194-523 7-261 (263)
139 KOG0579 Ste20-like serine/thre 99.7 1.6E-17 3.5E-22 183.6 13.2 242 185-525 30-292 (1187)
140 cd07880 STKc_p38gamma_MAPK12 C 99.7 1.4E-16 3E-21 172.4 20.4 287 178-526 3-302 (343)
141 cd07870 STKc_PFTAIRE2 Catalyti 99.7 2.8E-17 6.1E-22 172.4 14.4 134 195-370 11-153 (291)
142 KOG0610 Putative serine/threon 99.7 1.1E-17 2.4E-22 178.9 11.2 134 195-370 83-229 (459)
143 PHA03209 serine/threonine kina 99.7 4.6E-17 1E-21 177.4 16.3 125 195-369 72-206 (357)
144 cd07860 STKc_CDK2_3 Catalytic 99.7 1.7E-17 3.8E-22 172.9 12.4 135 195-371 6-151 (284)
145 KOG0608 Warts/lats-like serine 99.7 2.1E-17 4.5E-22 183.1 13.0 142 187-370 629-779 (1034)
146 cd06615 PKc_MEK Catalytic doma 99.7 9.6E-17 2.1E-21 170.6 17.9 135 195-371 7-151 (308)
147 cd07850 STKc_JNK Catalytic dom 99.7 4.2E-17 9E-22 176.9 15.4 142 195-372 22-170 (353)
148 cd06642 STKc_STK25-YSK1 Cataly 99.7 9.5E-17 2.1E-21 167.2 17.3 144 185-372 2-153 (277)
149 cd05633 STKc_GRK3 Catalytic do 99.7 8.5E-17 1.8E-21 168.6 16.9 139 196-371 1-148 (279)
150 cd05581 STKc_PDK1 Catalytic do 99.7 4.9E-17 1.1E-21 168.2 14.5 255 195-523 7-278 (280)
151 PLN03225 Serine/threonine-prot 99.7 9.3E-17 2E-21 185.6 17.9 265 194-525 137-453 (566)
152 cd06628 STKc_MAPKKK_Byr2_like 99.7 2.3E-16 4.9E-21 162.8 18.8 252 195-524 6-266 (267)
153 cd08227 PK_STRAD_alpha Pseudok 99.7 1.5E-16 3.1E-21 170.7 17.7 133 196-369 5-150 (327)
154 cd05085 PTKc_Fer Catalytic dom 99.7 2.6E-16 5.6E-21 160.8 18.8 134 195-371 1-144 (250)
155 cd06637 STKc_TNIK Catalytic do 99.7 2.1E-17 4.6E-22 171.0 10.7 143 184-371 3-162 (272)
156 KOG0690 Serine/threonine prote 99.7 1.5E-17 3.2E-22 172.8 9.4 236 195-526 174-428 (516)
157 cd06646 STKc_MAP4K5 Catalytic 99.7 1.4E-16 3E-21 164.6 16.5 134 195-371 15-157 (267)
158 smart00090 RIO RIO-like kinase 99.7 1.1E-16 2.4E-21 165.6 15.6 180 195-406 34-227 (237)
159 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-16 3.4E-21 159.1 16.2 159 194-378 20-183 (198)
160 cd07845 STKc_CDK10 Catalytic d 99.7 4.2E-17 9E-22 173.0 12.8 136 195-372 13-160 (309)
161 cd07841 STKc_CDK7 Catalytic do 99.7 5.6E-17 1.2E-21 170.5 13.4 139 195-372 6-154 (298)
162 KOG0666 Cyclin C-dependent kin 99.7 8.2E-18 1.8E-22 174.1 6.7 148 185-373 20-189 (438)
163 cd05104 PTKc_Kit Catalytic dom 99.7 9.9E-17 2.1E-21 176.1 15.7 240 194-520 40-368 (375)
164 cd06640 STKc_MST4 Catalytic do 99.7 1.6E-16 3.5E-21 165.6 16.6 144 185-372 2-153 (277)
165 cd08529 STKc_FA2-like Catalyti 99.7 4.1E-16 9E-21 159.4 19.1 238 195-523 6-254 (256)
166 cd07877 STKc_p38alpha_MAPK14 C 99.7 4.7E-16 1E-20 168.4 20.6 141 195-371 23-171 (345)
167 cd06631 STKc_YSK4 Catalytic do 99.7 2.7E-16 5.9E-21 162.3 17.7 250 195-524 6-264 (265)
168 cd06622 PKc_MAPKK_PBS2_like Ca 99.7 1.3E-16 2.7E-21 166.8 15.2 246 195-525 7-265 (286)
169 cd07857 STKc_MPK1 Catalytic do 99.7 4.3E-16 9.4E-21 167.4 19.8 302 195-569 6-331 (332)
170 cd08219 STKc_Nek3 Catalytic do 99.7 4.1E-16 9E-21 160.0 18.6 136 195-372 6-152 (255)
171 cd07844 STKc_PCTAIRE_like Cata 99.7 2.4E-16 5.1E-21 165.2 17.0 133 195-370 11-153 (291)
172 cd05611 STKc_Rim15_like Cataly 99.7 1.5E-16 3.3E-21 163.7 15.2 137 195-370 2-147 (260)
173 PHA03210 serine/threonine kina 99.7 1.3E-16 2.9E-21 182.0 16.0 279 195-525 154-457 (501)
174 cd05577 STKc_GRK Catalytic dom 99.7 1.9E-16 4.1E-21 165.1 15.5 238 197-525 1-257 (277)
175 KOG0611 Predicted serine/threo 99.7 9.7E-17 2.1E-21 170.5 13.3 214 195-463 59-287 (668)
176 cd06620 PKc_MAPKK_Byr1_like Ca 99.7 3.6E-16 7.7E-21 163.7 17.5 134 195-370 11-154 (284)
177 cd07847 STKc_CDKL1_4 Catalytic 99.7 4.8E-16 1E-20 161.8 18.3 138 195-373 7-153 (286)
178 cd07843 STKc_CDC2L1 Catalytic 99.7 2E-16 4.3E-21 166.1 15.5 136 195-372 11-158 (293)
179 cd05097 PTKc_DDR_like Catalyti 99.7 3E-16 6.5E-21 165.3 16.9 135 195-371 11-180 (295)
180 KOG4717 Serine/threonine prote 99.7 8.5E-17 1.8E-21 175.0 12.8 169 194-403 23-208 (864)
181 cd07879 STKc_p38delta_MAPK13 C 99.7 3.2E-16 6.9E-21 169.4 17.3 271 194-526 20-301 (342)
182 cd06641 STKc_MST3 Catalytic do 99.7 4.8E-16 1E-20 162.1 18.0 247 185-525 2-256 (277)
183 cd06645 STKc_MAP4K3 Catalytic 99.7 2.8E-16 6.1E-21 162.3 16.1 134 195-371 15-157 (267)
184 KOG0582 Ste20-like serine/thre 99.7 2.2E-16 4.8E-21 170.2 15.6 136 195-372 32-178 (516)
185 cd05088 PTKc_Tie2 Catalytic do 99.7 6.1E-16 1.3E-20 164.1 18.7 134 195-369 13-173 (303)
186 KOG0670 U4/U6-associated splic 99.7 1.5E-16 3.3E-21 173.4 14.1 262 196-525 439-749 (752)
187 cd05606 STKc_beta_ARK Catalyti 99.7 4.5E-16 9.7E-21 163.0 17.2 242 196-525 1-258 (278)
188 cd07849 STKc_ERK1_2_like Catal 99.7 4E-16 8.7E-21 167.9 17.3 139 195-371 11-157 (336)
189 cd07837 STKc_CdkB_plant Cataly 99.7 1.6E-16 3.5E-21 166.5 13.9 135 195-371 7-162 (295)
190 cd06635 STKc_TAO1 Catalytic do 99.7 8.4E-16 1.8E-20 164.1 19.6 153 176-371 14-176 (317)
191 KOG0192 Tyrosine kinase specif 99.7 2.9E-16 6.3E-21 171.6 16.2 165 196-403 48-235 (362)
192 cd07836 STKc_Pho85 Catalytic d 99.7 3.5E-16 7.7E-21 162.9 16.2 134 195-371 6-151 (284)
193 cd07833 STKc_CDKL Catalytic do 99.7 2.9E-16 6.2E-21 163.6 15.4 138 195-373 7-153 (288)
194 cd06630 STKc_MEKK1 Catalytic d 99.7 5.3E-16 1.1E-20 159.9 16.9 249 195-525 6-267 (268)
195 cd00192 PTKc Catalytic domain 99.7 4.5E-16 9.7E-21 158.7 16.1 136 195-372 1-157 (262)
196 KOG4645 MAPKKK (MAP kinase kin 99.7 9.8E-18 2.1E-22 198.2 4.3 233 194-524 1240-1496(1509)
197 cd07840 STKc_CDK9_like Catalyt 99.7 3.9E-16 8.4E-21 162.1 15.6 137 195-373 5-153 (287)
198 cd05041 PTKc_Fes_like Catalyti 99.7 8.9E-16 1.9E-20 156.9 17.9 134 195-371 1-144 (251)
199 PTZ00024 cyclin-dependent prot 99.7 3.7E-16 8.1E-21 167.8 15.7 285 195-525 15-316 (335)
200 cd06659 STKc_PAK6 Catalytic do 99.7 2.8E-16 6E-21 166.4 14.4 248 185-525 19-274 (297)
201 cd05105 PTKc_PDGFR_alpha Catal 99.7 4.9E-16 1.1E-20 172.5 17.0 45 327-371 244-288 (400)
202 KOG0612 Rho-associated, coiled 99.7 5.4E-17 1.2E-21 189.9 9.7 230 195-507 81-321 (1317)
203 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 2.9E-16 6.3E-21 169.0 14.7 287 195-559 16-315 (328)
204 cd05064 PTKc_EphR_A10 Catalyti 99.7 8.6E-16 1.9E-20 159.4 17.7 134 195-370 11-157 (266)
205 cd05048 PTKc_Ror Catalytic Dom 99.7 3.6E-16 7.8E-21 162.9 14.9 135 195-371 11-175 (283)
206 cd05119 RIO RIO kinase family, 99.7 7E-16 1.5E-20 152.0 16.1 163 195-380 3-174 (187)
207 cd07846 STKc_CDKL2_3 Catalytic 99.7 2.8E-16 6.1E-21 163.8 14.0 137 195-372 7-152 (286)
208 cd05049 PTKc_Trk Catalytic dom 99.7 9.1E-16 2E-20 159.4 17.8 134 195-370 11-172 (280)
209 cd06605 PKc_MAPKK Catalytic do 99.7 1.5E-15 3.3E-20 156.3 19.3 239 195-525 7-260 (265)
210 KOG0986 G protein-coupled rece 99.7 1.3E-16 2.7E-21 172.1 11.4 232 195-514 191-433 (591)
211 cd08223 STKc_Nek4 Catalytic do 99.7 5.8E-16 1.3E-20 158.6 16.0 238 195-523 6-255 (257)
212 cd06623 PKc_MAPKK_plant_like C 99.7 1.2E-15 2.7E-20 156.3 18.4 240 195-525 7-259 (264)
213 cd08224 STKc_Nek6_Nek7 Catalyt 99.7 5.7E-16 1.2E-20 159.4 15.8 138 195-372 8-158 (267)
214 cd06658 STKc_PAK5 Catalytic do 99.7 3.4E-16 7.3E-21 165.4 14.4 247 186-525 21-275 (292)
215 cd06643 STKc_SLK Catalytic dom 99.7 1E-15 2.2E-20 159.8 17.7 252 186-525 4-265 (282)
216 cd05122 PKc_STE Catalytic doma 99.7 2.6E-15 5.7E-20 151.7 20.2 237 195-523 6-252 (253)
217 cd05062 PTKc_IGF-1R Catalytic 99.7 2E-15 4.4E-20 157.2 19.9 135 195-371 12-170 (277)
218 cd05052 PTKc_Abl Catalytic dom 99.7 1.5E-15 3.3E-20 156.9 18.7 134 195-372 12-156 (263)
219 cd05103 PTKc_VEGFR2 Catalytic 99.7 7.2E-16 1.6E-20 166.8 17.0 137 195-371 13-230 (343)
220 cd05106 PTKc_CSF-1R Catalytic 99.7 5.2E-16 1.1E-20 170.5 16.0 136 195-371 44-263 (374)
221 cd05034 PTKc_Src_like Catalyti 99.7 2.9E-15 6.2E-20 154.1 20.4 133 195-372 12-155 (261)
222 cd06612 STKc_MST1_2 Catalytic 99.7 7.7E-16 1.7E-20 157.4 16.1 236 195-523 9-254 (256)
223 cd06644 STKc_STK10_LOK Catalyt 99.7 1.3E-15 2.9E-20 160.0 18.3 253 185-525 10-272 (292)
224 cd06636 STKc_MAP4K4_6 Catalyti 99.7 1.7E-16 3.7E-21 165.5 11.3 243 195-524 22-281 (282)
225 cd05047 PTKc_Tie Catalytic dom 99.7 2.2E-15 4.7E-20 156.6 19.6 134 195-369 1-161 (270)
226 cd05039 PTKc_Csk_like Catalyti 99.7 1.5E-15 3.3E-20 155.9 18.1 132 195-372 12-154 (256)
227 cd05574 STKc_phototropin_like 99.7 1.3E-15 2.9E-20 161.8 18.3 137 195-371 7-154 (316)
228 cd05051 PTKc_DDR Catalytic dom 99.7 1.1E-15 2.3E-20 160.4 17.4 135 195-371 11-181 (296)
229 PHA02988 hypothetical protein; 99.7 1.5E-15 3.3E-20 160.0 18.4 236 192-519 23-272 (283)
230 smart00219 TyrKc Tyrosine kina 99.7 1.2E-15 2.6E-20 155.7 17.1 137 195-373 5-156 (258)
231 cd05579 STKc_MAST_like Catalyt 99.7 6.2E-16 1.3E-20 158.2 14.9 134 197-370 1-143 (265)
232 cd05580 STKc_PKA Catalytic dom 99.7 2.1E-15 4.6E-20 158.5 19.3 237 195-525 7-257 (290)
233 cd05109 PTKc_HER2 Catalytic do 99.7 2.2E-15 4.8E-20 157.1 18.8 134 195-371 13-160 (279)
234 cd05090 PTKc_Ror1 Catalytic do 99.7 7.7E-16 1.7E-20 160.8 15.4 135 195-371 11-175 (283)
235 cd05053 PTKc_FGFR Catalytic do 99.7 2.1E-15 4.5E-20 158.2 18.7 239 195-521 18-286 (293)
236 cd06632 STKc_MEKK1_plant Catal 99.7 5.5E-16 1.2E-20 158.4 14.0 141 194-372 5-154 (258)
237 PLN00009 cyclin-dependent kina 99.7 8.2E-16 1.8E-20 161.5 15.6 135 195-371 8-154 (294)
238 cd07835 STKc_CDK1_like Catalyt 99.7 4.9E-16 1.1E-20 161.9 13.7 135 195-371 5-150 (283)
239 cd06654 STKc_PAK1 Catalytic do 99.7 1.2E-15 2.7E-20 161.3 16.9 240 195-525 26-273 (296)
240 cd05572 STKc_cGK_PKG Catalytic 99.7 1.5E-15 3.2E-20 156.6 16.9 137 197-373 1-146 (262)
241 cd05578 STKc_Yank1 Catalytic d 99.7 4.9E-16 1.1E-20 159.7 13.4 138 195-372 6-152 (258)
242 cd06655 STKc_PAK2 Catalytic do 99.7 2.3E-15 4.9E-20 159.4 18.8 252 181-526 14-273 (296)
243 cd08228 STKc_Nek6 Catalytic do 99.7 9.9E-16 2.1E-20 158.0 15.6 138 195-372 8-158 (267)
244 cd05079 PTKc_Jak1_rpt2 Catalyt 99.7 1.9E-15 4E-20 158.3 17.8 135 195-371 10-160 (284)
245 PRK09188 serine/threonine prot 99.7 5.5E-16 1.2E-20 169.5 14.1 137 195-372 24-164 (365)
246 cd07858 STKc_TEY_MAPK_plant Ca 99.7 2.2E-15 4.8E-20 162.4 18.7 141 195-372 11-160 (337)
247 cd05123 STKc_AGC Catalytic dom 99.7 1.1E-15 2.4E-20 155.7 15.5 136 197-372 1-145 (250)
248 KOG0603 Ribosomal protein S6 k 99.7 2.6E-16 5.7E-21 176.3 11.7 229 196-525 329-566 (612)
249 cd05040 PTKc_Ack_like Catalyti 99.7 2E-15 4.3E-20 154.9 17.3 135 195-372 1-149 (257)
250 cd07855 STKc_ERK5 Catalytic do 99.7 7.5E-16 1.6E-20 165.7 14.8 136 195-371 11-158 (334)
251 cd05059 PTKc_Tec_like Catalyti 99.7 2.2E-15 4.8E-20 155.1 17.6 132 195-371 10-151 (256)
252 cd06609 STKc_MST3_like Catalyt 99.7 2E-15 4.4E-20 156.7 17.5 240 195-525 7-254 (274)
253 cd06621 PKc_MAPKK_Pek1_like Ca 99.7 2.8E-15 6.1E-20 157.3 18.7 135 195-371 7-156 (287)
254 cd06617 PKc_MKK3_6 Catalytic d 99.7 1.4E-15 3.1E-20 158.3 16.3 243 195-525 7-264 (283)
255 cd07838 STKc_CDK4_6_like Catal 99.7 2.7E-15 5.9E-20 156.0 18.3 260 195-523 5-285 (287)
256 cd06917 STKc_NAK1_like Catalyt 99.7 5.1E-15 1.1E-19 153.8 20.3 244 195-525 7-258 (277)
257 cd07842 STKc_CDK8_like Catalyt 99.7 1.2E-15 2.6E-20 161.4 15.8 137 195-372 6-164 (316)
258 cd06627 STKc_Cdc7_like Catalyt 99.7 6.3E-15 1.4E-19 150.0 20.5 138 195-373 6-152 (254)
259 KOG0671 LAMMER dual specificit 99.7 6.1E-16 1.3E-20 164.3 13.3 271 195-525 95-409 (415)
260 cd06611 STKc_SLK_like Catalyti 99.7 1.9E-15 4.2E-20 157.4 17.0 134 195-371 11-154 (280)
261 cd05095 PTKc_DDR2 Catalytic do 99.7 2.6E-15 5.7E-20 158.2 18.2 135 195-371 11-181 (296)
262 cd05035 PTKc_Axl_like Catalyti 99.7 2.1E-15 4.6E-20 155.6 17.0 136 195-371 5-164 (273)
263 PTZ00266 NIMA-related protein 99.7 8.4E-16 1.8E-20 184.0 15.9 241 195-525 19-298 (1021)
264 cd05063 PTKc_EphR_A2 Catalytic 99.7 1.7E-15 3.7E-20 156.5 16.3 137 194-372 10-159 (268)
265 cd05089 PTKc_Tie1 Catalytic do 99.7 3.4E-15 7.4E-20 157.6 18.8 134 195-369 8-168 (297)
266 cd06656 STKc_PAK3 Catalytic do 99.7 8.3E-16 1.8E-20 162.6 14.2 141 187-372 19-167 (297)
267 KOG4279 Serine/threonine prote 99.7 7.8E-16 1.7E-20 172.0 14.2 218 195-476 581-820 (1226)
268 cd05070 PTKc_Fyn_Yrk Catalytic 99.7 3.1E-15 6.8E-20 154.1 17.9 131 195-371 12-153 (260)
269 cd08229 STKc_Nek7 Catalytic do 99.7 1.8E-15 3.9E-20 156.1 16.0 137 195-371 8-157 (267)
270 cd08218 STKc_Nek1 Catalytic do 99.7 2.8E-15 6.1E-20 153.7 17.3 238 195-523 6-254 (256)
271 cd07864 STKc_CDK12 Catalytic d 99.7 1E-15 2.2E-20 161.0 14.5 136 195-372 13-168 (302)
272 cd05115 PTKc_Zap-70 Catalytic 99.7 3.7E-15 8E-20 154.1 18.2 133 196-371 2-146 (257)
273 cd05101 PTKc_FGFR2 Catalytic d 99.7 3.4E-15 7.4E-20 158.0 18.2 137 195-372 21-189 (304)
274 cd06648 STKc_PAK_II Catalytic 99.7 2E-15 4.4E-20 158.5 16.4 240 195-525 25-272 (285)
275 PHA03390 pk1 serine/threonine- 99.7 2.6E-15 5.7E-20 156.4 16.9 230 197-524 24-264 (267)
276 PRK14879 serine/threonine prot 99.6 8.2E-15 1.8E-19 147.1 19.9 139 195-371 2-145 (211)
277 cd05114 PTKc_Tec_Rlk Catalytic 99.6 4.9E-15 1.1E-19 152.3 18.6 132 195-371 10-151 (256)
278 cd05066 PTKc_EphR_A Catalytic 99.6 3.6E-15 7.9E-20 154.5 17.7 136 195-372 10-158 (267)
279 cd05037 PTK_Jak_rpt1 Pseudokin 99.6 2.6E-15 5.6E-20 153.8 16.4 132 195-371 1-159 (259)
280 cd05061 PTKc_InsR Catalytic do 99.6 5.4E-15 1.2E-19 155.2 19.1 135 195-371 12-170 (288)
281 cd05082 PTKc_Csk Catalytic dom 99.6 4.7E-15 1E-19 152.5 18.2 130 195-371 12-153 (256)
282 cd06624 STKc_ASK Catalytic dom 99.6 2.1E-15 4.6E-20 156.1 15.8 134 195-371 14-160 (268)
283 cd07852 STKc_MAPK15 Catalytic 99.6 5.1E-15 1.1E-19 159.3 19.1 136 195-372 13-159 (337)
284 cd06651 STKc_MEKK3 Catalytic d 99.6 3.4E-15 7.4E-20 154.5 17.2 140 194-371 7-157 (266)
285 cd05116 PTKc_Syk Catalytic dom 99.6 4.1E-15 8.9E-20 153.2 17.6 134 196-371 2-146 (257)
286 cd06638 STKc_myosinIIIA Cataly 99.6 3.4E-15 7.5E-20 155.8 17.3 243 195-523 24-284 (286)
287 cd05118 STKc_CMGC Catalytic do 99.6 1.6E-15 3.6E-20 157.3 14.8 137 195-373 5-151 (283)
288 cd05075 PTKc_Axl Catalytic dom 99.6 3.5E-15 7.6E-20 154.4 17.0 136 195-371 5-163 (272)
289 cd07851 STKc_p38 Catalytic dom 99.6 4.7E-15 1E-19 160.4 18.8 143 194-372 20-170 (343)
290 cd07830 STKc_MAK_like Catalyti 99.6 1.8E-15 4E-20 157.4 14.9 136 195-372 5-151 (283)
291 cd05108 PTKc_EGFR Catalytic do 99.6 1.9E-15 4E-20 161.2 15.3 135 195-372 13-161 (316)
292 cd05068 PTKc_Frk_like Catalyti 99.6 3.8E-15 8.2E-20 153.6 17.1 132 195-371 12-154 (261)
293 KOG1035 eIF-2alpha kinase GCN2 99.6 1.5E-16 3.3E-21 187.5 7.4 194 302-525 669-874 (1351)
294 cd06610 STKc_OSR1_SPAK Catalyt 99.6 5.8E-15 1.3E-19 151.7 18.3 248 195-524 7-266 (267)
295 cd05069 PTKc_Yes Catalytic dom 99.6 7.3E-15 1.6E-19 151.6 19.1 131 195-371 12-153 (260)
296 cd05036 PTKc_ALK_LTK Catalytic 99.6 7.2E-15 1.6E-19 153.2 19.2 135 195-371 12-170 (277)
297 cd07866 STKc_BUR1 Catalytic do 99.6 6.7E-16 1.5E-20 162.7 11.5 143 195-371 14-166 (311)
298 cd06608 STKc_myosinIII_like Ca 99.6 1.4E-15 3.1E-20 156.6 13.7 243 195-523 12-273 (275)
299 cd06614 STKc_PAK Catalytic dom 99.6 5E-15 1.1E-19 155.0 18.0 247 185-525 17-273 (286)
300 cd05054 PTKc_VEGFR Catalytic d 99.6 2.3E-15 4.9E-20 162.9 15.8 45 327-371 180-224 (337)
301 cd06606 STKc_MAPKKK Catalytic 99.6 1E-15 2.2E-20 155.4 12.2 138 195-373 6-154 (260)
302 KOG1989 ARK protein kinase fam 99.6 2.6E-15 5.6E-20 173.5 16.8 249 194-520 42-305 (738)
303 cd06613 STKc_MAP4K3_like Catal 99.6 2.5E-15 5.3E-20 154.2 15.1 135 195-372 9-153 (262)
304 cd05072 PTKc_Lyn Catalytic dom 99.6 5.4E-15 1.2E-19 152.3 17.6 133 195-372 12-155 (261)
305 cd05042 PTKc_Aatyk Catalytic d 99.6 8.7E-15 1.9E-19 151.6 19.2 133 196-370 2-150 (269)
306 cd06626 STKc_MEKK4 Catalytic d 99.6 3.9E-15 8.4E-20 152.9 16.5 247 195-523 6-262 (264)
307 cd05065 PTKc_EphR_B Catalytic 99.6 5.4E-15 1.2E-19 153.1 17.6 135 195-371 10-157 (269)
308 cd06633 STKc_TAO3 Catalytic do 99.6 3.4E-15 7.5E-20 159.2 16.5 147 181-370 15-171 (313)
309 cd08221 STKc_Nek9 Catalytic do 99.6 3.7E-15 8.1E-20 152.8 16.1 137 195-372 6-153 (256)
310 cd08220 STKc_Nek8 Catalytic do 99.6 2E-15 4.3E-20 154.3 14.1 237 195-523 6-254 (256)
311 cd05113 PTKc_Btk_Bmx Catalytic 99.6 8.4E-15 1.8E-19 151.2 18.8 132 195-371 10-151 (256)
312 TIGR03724 arch_bud32 Kae1-asso 99.6 7.8E-15 1.7E-19 146.1 17.9 138 197-372 2-141 (199)
313 cd05112 PTKc_Itk Catalytic dom 99.6 9.4E-15 2E-19 149.8 19.0 132 195-371 10-151 (256)
314 cd07865 STKc_CDK9 Catalytic do 99.6 1.7E-15 3.7E-20 159.5 13.8 142 195-372 18-171 (310)
315 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.6 6.6E-15 1.4E-19 153.7 18.1 135 195-372 10-160 (284)
316 cd07831 STKc_MOK Catalytic dom 99.6 7.1E-15 1.5E-19 152.7 18.1 135 195-371 5-150 (282)
317 cd08226 PK_STRAD_beta Pseudoki 99.6 4.2E-15 9.2E-20 159.4 16.9 131 197-368 6-149 (328)
318 KOG0983 Mitogen-activated prot 99.6 4E-16 8.7E-21 159.3 8.3 166 196-403 99-283 (391)
319 cd05033 PTKc_EphR Catalytic do 99.6 6.8E-15 1.5E-19 152.1 17.7 135 195-371 10-157 (266)
320 cd05032 PTKc_InsR_like Catalyt 99.6 3.9E-15 8.4E-20 154.5 15.9 135 195-371 12-170 (277)
321 cd05050 PTKc_Musk Catalytic do 99.6 5E-15 1.1E-19 155.1 16.9 134 195-370 11-180 (288)
322 cd06639 STKc_myosinIIIB Cataly 99.6 5.1E-15 1.1E-19 155.3 16.9 245 195-525 28-290 (291)
323 cd05107 PTKc_PDGFR_beta Cataly 99.6 6.8E-15 1.5E-19 163.5 18.6 45 327-371 246-290 (401)
324 cd08217 STKc_Nek2 Catalytic do 99.6 3E-15 6.4E-20 153.2 14.6 239 195-524 6-264 (265)
325 cd05060 PTKc_Syk_like Catalyti 99.6 3.7E-15 7.9E-20 153.4 15.3 134 196-372 2-147 (257)
326 cd00180 PKc Catalytic domain o 99.6 5.9E-15 1.3E-19 143.4 15.9 135 197-373 1-146 (215)
327 cd05098 PTKc_FGFR1 Catalytic d 99.6 8.9E-15 1.9E-19 155.2 18.6 136 195-371 24-191 (307)
328 cd05099 PTKc_FGFR4 Catalytic d 99.6 8.6E-15 1.9E-19 156.0 18.5 137 195-372 18-186 (314)
329 cd05091 PTKc_Ror2 Catalytic do 99.6 3.4E-15 7.3E-20 155.8 14.9 136 195-372 11-176 (283)
330 cd05045 PTKc_RET Catalytic dom 99.6 6.7E-15 1.4E-19 154.5 16.9 135 195-371 6-178 (290)
331 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.6 7.7E-15 1.7E-19 152.2 17.1 133 196-370 2-150 (269)
332 cd05613 STKc_MSK1_N N-terminal 99.6 5.7E-15 1.2E-19 154.8 16.3 140 195-372 6-157 (290)
333 cd05100 PTKc_FGFR3 Catalytic d 99.6 1.1E-14 2.4E-19 156.6 18.9 137 195-372 18-186 (334)
334 cd05055 PTKc_PDGFR Catalytic d 99.6 1E-14 2.2E-19 154.9 18.2 138 194-372 40-193 (302)
335 cd07834 STKc_MAPK Catalytic do 99.6 1.8E-15 4E-20 161.7 12.5 142 195-373 6-156 (330)
336 cd05093 PTKc_TrkB Catalytic do 99.6 1E-14 2.2E-19 153.2 17.9 134 195-371 11-171 (288)
337 cd05077 PTK_Jak1_rpt1 Pseudoki 99.6 8.1E-15 1.8E-19 152.1 16.7 133 195-370 1-162 (262)
338 cd05583 STKc_MSK_N N-terminal 99.6 6.8E-15 1.5E-19 154.1 16.1 139 195-371 6-156 (288)
339 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.6 5.2E-15 1.1E-19 154.7 15.1 82 289-370 76-174 (274)
340 cd06607 STKc_TAO Catalytic dom 99.6 1.9E-14 4.2E-19 152.6 19.7 250 183-525 11-270 (307)
341 cd08215 STKc_Nek Catalytic dom 99.6 1.7E-14 3.8E-19 146.6 18.6 239 195-524 6-257 (258)
342 KOG0665 Jun-N-terminal kinase 99.6 1.6E-16 3.4E-21 165.5 3.5 284 190-526 18-314 (369)
343 cd05148 PTKc_Srm_Brk Catalytic 99.6 7.3E-15 1.6E-19 151.1 15.9 134 195-372 12-156 (261)
344 cd06616 PKc_MKK4 Catalytic dom 99.6 1.1E-14 2.3E-19 152.5 17.2 246 195-525 10-270 (288)
345 cd06652 STKc_MEKK2 Catalytic d 99.6 7.4E-15 1.6E-19 151.8 15.6 244 195-523 8-262 (265)
346 cd06634 STKc_TAO2 Catalytic do 99.6 1.2E-14 2.6E-19 154.5 17.7 253 180-525 8-270 (308)
347 cd07829 STKc_CDK_like Catalyti 99.6 5.3E-15 1.2E-19 153.4 14.4 136 195-372 5-150 (282)
348 cd05057 PTKc_EGFR_like Catalyt 99.6 1.9E-14 4.1E-19 150.0 18.6 135 195-372 13-161 (279)
349 cd05044 PTKc_c-ros Catalytic d 99.6 8.4E-15 1.8E-19 151.3 15.7 134 196-371 2-162 (269)
350 cd05058 PTKc_Met_Ron Catalytic 99.6 1.8E-14 3.9E-19 148.2 18.0 134 196-371 2-149 (262)
351 cd05071 PTKc_Src Catalytic dom 99.6 1.8E-14 4E-19 149.1 18.1 132 195-372 12-154 (262)
352 KOG0196 Tyrosine kinase, EPH ( 99.6 6.2E-16 1.3E-20 175.4 7.5 199 164-407 606-827 (996)
353 KOG0197 Tyrosine kinases [Sign 99.6 3.1E-15 6.8E-20 164.9 12.8 210 195-462 212-440 (468)
354 cd05083 PTKc_Chk Catalytic dom 99.6 1.2E-14 2.6E-19 149.2 16.4 127 195-370 12-150 (254)
355 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.6 6.6E-15 1.4E-19 153.8 14.5 136 195-372 10-159 (283)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.6 8.2E-15 1.8E-19 151.2 14.7 134 195-371 1-159 (258)
357 cd05067 PTKc_Lck_Blk Catalytic 99.6 1.6E-14 3.4E-19 148.9 16.7 131 195-371 12-153 (260)
358 cd06653 STKc_MEKK3_like_1 Cata 99.6 2.4E-14 5.2E-19 148.1 18.1 244 195-523 8-262 (264)
359 cd05038 PTKc_Jak_rpt2 Catalyti 99.6 1.4E-14 2.9E-19 150.5 16.3 135 195-371 10-160 (284)
360 cd07854 STKc_MAPK4_6 Catalytic 99.6 2.2E-14 4.7E-19 155.1 18.4 142 195-371 11-166 (342)
361 KOG0695 Serine/threonine prote 99.6 6.7E-16 1.5E-20 160.9 6.2 170 195-403 256-440 (593)
362 cd06647 STKc_PAK_I Catalytic d 99.6 1.2E-14 2.5E-19 153.6 15.7 240 195-525 25-272 (293)
363 PLN03224 probable serine/threo 99.6 1.5E-14 3.3E-19 164.5 17.4 195 302-525 258-503 (507)
364 PF07714 Pkinase_Tyr: Protein 99.6 2.7E-14 5.8E-19 148.1 17.2 134 195-370 5-153 (259)
365 KOG0586 Serine/threonine prote 99.6 5.2E-15 1.1E-19 165.2 12.1 138 195-373 62-208 (596)
366 cd05056 PTKc_FAK Catalytic dom 99.6 3.3E-14 7.1E-19 147.4 17.1 134 195-372 12-159 (270)
367 cd05073 PTKc_Hck Catalytic dom 99.6 2.4E-14 5.3E-19 147.7 15.9 131 195-371 12-153 (260)
368 PHA02882 putative serine/threo 99.6 2.1E-14 4.6E-19 151.8 15.7 99 304-403 102-222 (294)
369 cd08225 STKc_Nek5 Catalytic do 99.6 1.4E-14 3E-19 148.3 13.8 137 195-372 6-154 (257)
370 KOG0696 Serine/threonine prote 99.6 4.9E-16 1.1E-20 165.5 3.0 206 195-457 355-575 (683)
371 KOG0604 MAP kinase-activated p 99.6 6.2E-16 1.3E-20 159.7 3.5 243 192-525 65-325 (400)
372 cd08530 STKc_CNK2-like Catalyt 99.6 8E-14 1.7E-18 142.3 19.1 137 195-372 6-155 (256)
373 KOG1006 Mitogen-activated prot 99.6 1.1E-15 2.4E-20 155.6 5.3 171 195-407 70-262 (361)
374 cd05094 PTKc_TrkC Catalytic do 99.6 4.4E-14 9.6E-19 148.5 17.5 134 195-371 11-174 (291)
375 KOG4721 Serine/threonine prote 99.6 1.1E-15 2.4E-20 168.0 5.4 183 151-403 104-300 (904)
376 cd06618 PKc_MKK7 Catalytic dom 99.6 4.1E-14 8.8E-19 149.2 16.9 245 194-525 20-276 (296)
377 cd05576 STKc_RPK118_like Catal 99.6 9.6E-15 2.1E-19 149.3 11.7 124 200-371 4-136 (237)
378 cd05092 PTKc_TrkA Catalytic do 99.6 4.9E-14 1.1E-18 147.3 17.3 134 195-371 11-173 (280)
379 cd08528 STKc_Nek10 Catalytic d 99.6 4.7E-14 1E-18 145.9 16.6 146 195-372 6-166 (269)
380 KOG0984 Mitogen-activated prot 99.6 3.8E-15 8.2E-20 147.2 7.6 167 195-403 52-241 (282)
381 KOG0193 Serine/threonine prote 99.6 8.8E-15 1.9E-19 162.8 11.2 233 194-514 397-641 (678)
382 cd05086 PTKc_Aatyk2 Catalytic 99.6 1E-13 2.2E-18 144.1 18.2 69 301-369 67-148 (268)
383 cd05074 PTKc_Tyro3 Catalytic d 99.6 1.3E-13 2.9E-18 142.6 18.8 134 195-371 5-164 (273)
384 KOG0607 MAP kinase-interacting 99.6 2E-14 4.2E-19 149.7 12.1 143 185-370 75-229 (463)
385 cd08216 PK_STRAD Pseudokinase 99.6 2.5E-14 5.3E-19 151.8 13.0 130 201-371 12-152 (314)
386 cd05046 PTK_CCK4 Pseudokinase 99.6 4.4E-14 9.6E-19 146.6 14.6 134 195-370 11-167 (275)
387 cd05610 STKc_MASTL Catalytic d 99.5 3E-14 6.6E-19 168.1 13.7 137 195-371 10-155 (669)
388 KOG0596 Dual specificity; seri 99.5 2.5E-14 5.5E-19 157.6 12.0 248 195-525 367-630 (677)
389 KOG1187 Serine/threonine prote 99.5 2.3E-14 5.1E-19 157.0 11.1 177 195-443 81-274 (361)
390 KOG0587 Traf2- and Nck-interac 99.5 3.1E-14 6.7E-19 163.8 11.6 175 184-403 16-217 (953)
391 KOG1167 Serine/threonine prote 99.5 1.9E-14 4.1E-19 154.7 9.2 134 195-372 42-185 (418)
392 cd08222 STKc_Nek11 Catalytic d 99.5 1E-13 2.2E-18 142.7 13.5 138 195-371 6-156 (260)
393 KOG0194 Protein tyrosine kinas 99.5 5.4E-14 1.2E-18 157.0 12.0 193 195-440 163-375 (474)
394 cd05043 PTK_Ryk Pseudokinase d 99.5 4.2E-13 9.1E-18 139.8 18.1 135 195-371 12-168 (280)
395 cd05111 PTK_HER3 Pseudokinase 99.5 6.8E-14 1.5E-18 146.4 12.1 72 301-372 80-161 (279)
396 cd05110 PTKc_HER4 Catalytic do 99.5 5.9E-14 1.3E-18 148.8 11.8 135 195-372 13-161 (303)
397 PRK09605 bifunctional UGMP fam 99.5 4.3E-13 9.3E-18 154.5 16.0 142 192-372 336-479 (535)
398 smart00220 S_TKc Serine/Threon 99.5 1.2E-12 2.7E-17 130.9 16.8 131 201-373 1-140 (244)
399 KOG1163 Casein kinase (serine/ 99.5 1.7E-13 3.6E-18 138.3 10.2 130 195-371 21-165 (341)
400 KOG0576 Mitogen-activated prot 99.5 2.3E-14 5E-19 160.6 3.8 144 185-373 13-165 (829)
401 KOG1095 Protein tyrosine kinas 99.5 3.6E-13 7.7E-18 160.4 14.0 133 195-370 698-852 (1025)
402 KOG1094 Discoidin domain recep 99.4 4.3E-13 9.3E-18 148.6 12.6 135 194-371 543-688 (807)
403 KOG1027 Serine/threonine prote 99.4 8.7E-14 1.9E-18 159.5 6.8 134 192-373 512-664 (903)
404 PRK12274 serine/threonine prot 99.4 1.2E-12 2.6E-17 132.5 13.5 134 195-373 8-145 (218)
405 KOG0614 cGMP-dependent protein 99.4 1.1E-13 2.4E-18 151.1 5.6 167 196-403 427-608 (732)
406 KOG1152 Signal transduction se 99.4 1.8E-13 3.8E-18 151.5 7.0 179 194-406 566-761 (772)
407 PLN00113 leucine-rich repeat r 99.4 1.1E-12 2.4E-17 160.7 14.1 238 194-520 695-945 (968)
408 cd05151 ChoK Choline Kinase (C 99.4 2.6E-12 5.7E-17 124.1 13.0 129 195-371 4-138 (170)
409 smart00221 STYKc Protein kinas 99.4 9.5E-13 2.1E-17 131.0 10.2 137 195-373 5-151 (225)
410 KOG3653 Transforming growth fa 99.4 1E-12 2.2E-17 143.1 9.6 137 195-373 216-369 (534)
411 KOG1151 Tousled-like protein k 99.4 8.9E-13 1.9E-17 141.9 7.7 260 195-525 469-744 (775)
412 KOG2345 Serine/threonine prote 99.4 5.7E-12 1.2E-16 127.9 12.4 251 195-519 27-293 (302)
413 KOG0199 ACK and related non-re 99.3 6.1E-13 1.3E-17 149.7 4.8 166 195-404 116-305 (1039)
414 PRK10345 hypothetical protein; 99.3 1.9E-11 4E-16 124.5 14.0 135 193-370 6-159 (210)
415 KOG4278 Protein tyrosine kinas 99.3 6E-12 1.3E-16 139.9 10.9 166 194-403 272-455 (1157)
416 KOG1026 Nerve growth factor re 99.3 5.9E-12 1.3E-16 145.6 11.2 170 195-406 492-697 (774)
417 PF01163 RIO1: RIO1 family; I 99.3 1.4E-11 3E-16 123.2 12.4 170 205-402 2-181 (188)
418 cd05120 APH_ChoK_like Aminogly 99.3 2.6E-11 5.6E-16 112.6 12.9 131 195-372 4-141 (155)
419 PRK01723 3-deoxy-D-manno-octul 99.3 3.5E-11 7.6E-16 124.8 14.7 145 194-371 36-193 (239)
420 KOG1164 Casein kinase (serine/ 99.3 1E-11 2.2E-16 134.0 9.8 133 194-368 23-175 (322)
421 KOG2052 Activin A type IB rece 99.3 1E-11 2.2E-16 134.5 9.5 135 195-373 217-369 (513)
422 PF06176 WaaY: Lipopolysacchar 99.3 9.7E-11 2.1E-15 119.0 15.1 75 295-370 109-184 (229)
423 KOG0584 Serine/threonine prote 99.3 2.1E-11 4.7E-16 136.8 11.4 250 182-525 34-299 (632)
424 cd05146 RIO3_euk RIO kinase fa 99.2 9E-11 2E-15 118.0 14.2 154 196-374 4-178 (197)
425 COG3642 Mn2+-dependent serine/ 99.2 5.1E-10 1.1E-14 110.3 16.5 137 195-369 2-140 (204)
426 KOG1345 Serine/threonine kinas 99.2 5.9E-11 1.3E-15 121.8 8.4 145 184-372 21-175 (378)
427 KOG1290 Serine/threonine prote 99.2 1.1E-10 2.4E-15 127.7 10.9 133 185-354 71-222 (590)
428 KOG1165 Casein kinase (serine/ 99.2 1.1E-10 2.4E-15 122.7 10.3 131 195-372 34-181 (449)
429 KOG1166 Mitotic checkpoint ser 99.1 1.7E-10 3.6E-15 137.8 11.3 131 195-369 704-850 (974)
430 KOG4257 Focal adhesion tyrosin 99.1 2.3E-10 5E-15 127.9 8.1 165 195-402 395-580 (974)
431 KOG0200 Fibroblast/platelet-de 99.0 1.6E-09 3.6E-14 126.7 14.2 167 196-403 303-510 (609)
432 COG1718 RIO1 Serine/threonine 99.0 7.3E-09 1.6E-13 106.6 15.9 176 196-402 55-241 (268)
433 KOG1025 Epidermal growth facto 99.0 7.3E-10 1.6E-14 127.2 6.7 167 194-403 701-889 (1177)
434 COG0478 RIO-like serine/threon 98.9 8.6E-09 1.9E-13 107.1 12.7 160 190-374 93-256 (304)
435 PLN00181 protein SPA1-RELATED; 98.9 2.4E-09 5.1E-14 129.2 8.1 187 302-525 53-268 (793)
436 cd05154 ACAD10_11_like Acyl-Co 98.9 6.6E-09 1.4E-13 104.2 9.7 35 338-372 173-209 (223)
437 PF14531 Kinase-like: Kinase-l 98.8 3.8E-08 8.3E-13 104.4 13.0 152 194-372 17-197 (288)
438 COG0515 SPS1 Serine/threonine 98.7 8.4E-08 1.8E-12 97.8 12.6 136 195-372 6-154 (384)
439 KOG3087 Serine/threonine prote 98.7 1.3E-07 2.8E-12 93.3 13.0 139 193-368 11-164 (229)
440 KOG0606 Microtubule-associated 98.7 1.1E-08 2.4E-13 120.9 5.8 150 330-514 153-304 (1205)
441 PRK15123 lipopolysaccharide co 98.7 2.6E-07 5.7E-12 97.5 15.4 94 271-369 75-194 (268)
442 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 5.5E-07 1.2E-11 92.7 13.6 32 339-371 153-184 (226)
443 KOG1240 Protein kinase contain 98.6 9.3E-08 2E-12 113.4 7.7 250 194-523 28-291 (1431)
444 PF01636 APH: Phosphotransfera 98.6 7.2E-07 1.6E-11 89.7 13.2 131 195-372 3-200 (239)
445 KOG0603 Ribosomal protein S6 k 98.5 1.6E-08 3.4E-13 114.5 0.3 165 197-403 2-180 (612)
446 PF06293 Kdo: Lipopolysacchari 98.5 1.6E-06 3.5E-11 87.8 13.7 97 270-371 57-172 (206)
447 KOG0590 Checkpoint kinase and 98.5 1.7E-07 3.7E-12 109.4 6.9 169 308-525 400-588 (601)
448 cd05150 APH Aminoglycoside 3'- 98.3 1.9E-05 4.2E-10 81.5 17.2 34 339-372 163-196 (244)
449 PRK05231 homoserine kinase; Pr 98.3 1.1E-05 2.4E-10 86.7 14.8 31 339-369 187-217 (319)
450 PRK10593 hypothetical protein; 98.2 1.3E-05 2.8E-10 85.9 13.7 93 172-316 3-100 (297)
451 cd05153 HomoserineK_II Homoser 98.2 2.1E-05 4.6E-10 83.4 13.3 31 339-369 175-205 (296)
452 cd05155 APH_ChoK_like_1 Unchar 98.1 2.8E-05 6E-10 80.1 11.6 33 339-371 164-196 (235)
453 KOG2270 Serine/threonine prote 98.1 8.6E-05 1.9E-09 80.5 15.4 184 188-402 144-339 (520)
454 PRK09550 mtnK methylthioribose 98.0 0.00029 6.2E-09 78.6 18.9 111 167-315 6-117 (401)
455 TIGR02721 ycfN_thiK thiamine k 98.0 3.2E-05 6.9E-10 80.6 10.7 32 340-372 147-178 (256)
456 cd05157 ETNK_euk Ethanolamine 98.0 7.7E-05 1.7E-09 76.3 12.9 33 339-371 170-203 (235)
457 COG2112 Predicted Ser/Thr prot 98.0 8.5E-05 1.8E-09 73.4 11.8 123 195-368 28-154 (201)
458 PRK09902 hypothetical protein; 97.9 0.00015 3.2E-09 74.0 13.5 140 191-369 20-179 (216)
459 TIGR00938 thrB_alt homoserine 97.9 0.00011 2.4E-09 78.8 12.9 31 339-369 187-217 (307)
460 smart00750 KIND kinase non-cat 97.9 2.8E-05 6.1E-10 75.3 7.3 143 327-525 24-168 (176)
461 KOG1024 Receptor-like protein 97.8 2.3E-05 5E-10 84.7 5.5 79 325-403 401-487 (563)
462 KOG2268 Serine/threonine prote 97.8 3.3E-05 7.1E-10 82.5 5.6 155 195-373 98-255 (465)
463 KOG1033 eIF-2alpha kinase PEK/ 97.6 4E-05 8.8E-10 85.8 3.6 174 302-522 329-512 (516)
464 PLN02876 acyl-CoA dehydrogenas 97.6 0.00082 1.8E-08 81.9 15.2 109 167-317 17-132 (822)
465 PRK06148 hypothetical protein; 97.6 0.002 4.2E-08 80.2 18.4 56 161-225 4-59 (1013)
466 KOG4158 BRPK/PTEN-induced prot 97.6 0.00012 2.6E-09 79.6 6.6 65 303-368 317-393 (598)
467 PRK12396 5-methylribose kinase 97.6 0.00069 1.5E-08 75.2 12.6 112 165-314 7-118 (409)
468 PF03881 Fructosamin_kin: Fruc 97.4 0.001 2.2E-08 71.1 11.5 94 170-314 2-97 (288)
469 PLN02756 S-methyl-5-thioribose 97.4 0.0013 2.9E-08 73.3 12.5 85 192-313 35-119 (418)
470 cd05156 ChoK_euk Choline Kinas 97.4 0.0008 1.7E-08 71.8 10.4 34 339-372 179-216 (302)
471 COG2334 Putative homoserine ki 97.4 0.0014 3E-08 71.5 12.2 29 341-369 199-228 (331)
472 cd05152 MPH2' Macrolide 2'-Pho 97.4 0.0017 3.8E-08 69.0 12.1 34 339-372 185-219 (276)
473 PLN02236 choline kinase 97.3 0.0031 6.7E-08 69.1 13.7 34 339-372 200-234 (344)
474 PRK11768 serine/threonine prot 97.3 0.0033 7.1E-08 68.3 13.6 29 339-369 196-224 (325)
475 PRK06149 hypothetical protein; 97.2 0.0039 8.4E-08 77.4 14.4 59 158-226 7-65 (972)
476 COG3173 Predicted aminoglycosi 97.0 0.0094 2E-07 64.6 13.4 35 339-373 198-232 (321)
477 TIGR01767 MTRK 5-methylthiorib 97.0 0.0055 1.2E-07 67.4 11.7 30 339-369 192-221 (370)
478 PLN02421 phosphotransferase, a 96.9 0.0068 1.5E-07 66.1 11.1 32 341-372 184-216 (330)
479 PF10707 YrbL-PhoP_reg: PhoP r 96.7 0.031 6.7E-07 56.7 13.6 145 194-364 6-166 (199)
480 TIGR02906 spore_CotS spore coa 96.4 0.027 5.9E-07 60.0 12.0 30 339-369 187-216 (313)
481 COG3001 Uncharacterized protei 95.9 0.14 3.1E-06 53.1 13.2 96 170-317 2-99 (286)
482 PF13095 FTA2: Kinetochore Sim 95.9 0.069 1.5E-06 54.3 10.7 55 304-367 152-206 (207)
483 KOG0590 Checkpoint kinase and 95.6 0.00092 2E-08 78.5 -4.3 169 195-403 26-219 (601)
484 PF04655 APH_6_hur: Aminoglyco 95.5 0.026 5.6E-07 59.4 6.3 31 195-226 8-38 (253)
485 KOG0601 Cyclin-dependent kinas 95.5 0.0031 6.7E-08 72.0 -0.6 139 195-374 120-277 (524)
486 PRK10271 thiK thiamine kinase; 95.5 0.012 2.6E-07 59.1 3.5 32 340-372 78-109 (188)
487 KOG2269 Serine/threonine prote 95.4 0.067 1.5E-06 57.8 9.1 188 187-402 251-458 (531)
488 PTZ00384 choline kinase; Provi 95.4 0.21 4.6E-06 55.7 13.6 30 339-369 227-256 (383)
489 PTZ00296 choline kinase; Provi 95.1 0.31 6.8E-06 55.4 13.9 32 339-371 284-315 (442)
490 COG5072 ALK1 Serine/threonine 94.4 0.1 2.2E-06 57.3 7.3 175 190-368 155-369 (488)
491 KOG0601 Cyclin-dependent kinas 94.3 0.036 7.8E-07 63.5 3.8 133 195-369 271-416 (524)
492 KOG1243 Protein kinase [Genera 93.3 0.43 9.4E-06 55.8 10.2 72 299-372 79-157 (690)
493 PF12260 PIP49_C: Protein-kina 93.2 0.34 7.3E-06 48.7 8.0 78 292-371 21-113 (188)
494 PF01633 Choline_kinase: Choli 92.6 0.059 1.3E-06 54.5 1.8 33 339-371 143-176 (211)
495 COG4857 Predicted kinase [Gene 91.6 0.71 1.5E-05 49.1 8.2 31 194-224 35-65 (408)
496 smart00587 CHK ZnF_C4 abd HLH 91.3 0.15 3.2E-06 51.3 2.9 35 338-372 119-158 (196)
497 COG0510 ycfN Thiamine kinase a 90.3 0.21 4.6E-06 53.0 3.1 32 340-371 154-185 (269)
498 TIGR02904 spore_ysxE spore coa 89.4 0.19 4.2E-06 53.9 2.0 31 339-369 196-226 (309)
499 KOG3741 Poly(A) ribonuclease s 89.1 4.8 0.0001 46.4 12.5 71 302-372 350-445 (655)
500 cd05610 STKc_MASTL Catalytic d 88.4 0.21 4.5E-06 59.8 1.4 34 493-526 605-638 (669)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-81 Score=706.29 Aligned_cols=481 Identities=36% Similarity=0.596 Sum_probs=416.4
Q ss_pred cCCHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhhhhhh--hhhhhcccchHHHHHHHHHHHhcCchhhhHhHHhhcCC
Q 005274 70 EYDLRKIASVYRRKPLILLRRVFQVGTTFGWWFGSRFVDE--LMERSDQMFPVRAAELRKILVELGPAYVKIAQAVSSRP 147 (704)
Q Consensus 70 ~yd~~~i~~~~~~rp~~~~~R~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~lr~~l~~lGp~~IKlGQ~lStr~ 147 (704)
.|....+......+.+..+.+.......+.++.....+.. ..........+++++|+++|++|||+|||+||+|||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~ 83 (517)
T COG0661 4 LYAVSRLPRIIRVRLRYLLGRLLRLTGRLALLLRLLSWLGKSKLASSEELREKRAERLRLALEELGPTFIKLGQILSTRP 83 (517)
T ss_pred hhhhhhhccceeeeehHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCc
Confidence 3455555666666777777777776665555444333322 11122333456789999999999999999999999999
Q ss_pred CCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChh
Q 005274 148 DLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQ 227 (704)
Q Consensus 148 Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~ 227 (704)
|++|++|++||++|||++||||+++++++|++++|.+++++|++|+++|||+||+||||+|+++ +|+.|||||||||++
T Consensus 84 Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~ 162 (517)
T COG0661 84 DLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLK-SGEEVAVKVQRPGIR 162 (517)
T ss_pred cccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEec-CCCEEEEEecCCChH
Confidence 9999999999999999999999999999999999999999999999999999999999999998 799999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhh--ccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeeccccee
Q 005274 228 AAISLDIFILHFIAGLIRKARK--FNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKV 305 (704)
Q Consensus 228 ~~i~~Dl~ilr~la~~~~~~~~--~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~v 305 (704)
+.+..|+.+|+.++.++++..+ .+.++.++++|+.+.+..|+||++||+|+++|+++|++.+.++||+|||++|+++|
T Consensus 163 ~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~V 242 (517)
T COG0661 163 ERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRV 242 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcE
Confidence 9999999999999999999854 45899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCChhhHHh--------hhhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH
Q 005274 306 LIMEWVEGQKLSEVKD--------LYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG 377 (704)
Q Consensus 306 LVmE~i~G~~L~d~~~--------~~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~ 377 (704)
|||||++|.++++... ..+.+.++.++++|++.+||||||||||||+++.+|+++++|||+++.+++.+|..
T Consensus 243 LtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~ 322 (517)
T COG0661 243 LTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRY 322 (517)
T ss_pred EEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCHHHHHH
Confidence 9999999999999853 25777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHH
Q 005274 378 FIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSL 457 (704)
Q Consensus 378 ~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~l 457 (704)
+.+++.+++++|++.++..+..+|++++..|...+..++..++.++++.+..+++++.+..++.++++++++++|+++.+
T Consensus 323 l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~p~~l~l 402 (517)
T COG0661 323 LAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYGKPLEEISFGEILDKLFEVARRFPMRLPPELVL 402 (517)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhHHHHHHHhhhhcc
Q 005274 458 VIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESLRARTEKALVKKQ 537 (704)
Q Consensus 458 iiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~~~~~~~~~~~~ 537 (704)
+.|++.++||+++.+||+++++..+.||..+......+|+ +.+-+..+....+++...+-.... ..+
T Consensus 403 l~r~~~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~l~~~~~--~~~------- 469 (517)
T COG0661 403 LQRTLLLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK----LLRELKDEAVAVLNALPLLPRLLR--DLL------- 469 (517)
T ss_pred HHHHHHHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH----HHHHHHHhHHHHHHHHHhhHHHHH--HHH-------
Confidence 9999999999999999999999999999999999999998 223333333344444444443221 000
Q ss_pred cCCcchhHhHHHHHhhhccccchhHHHHHHHHHH
Q 005274 538 TEDTDSRLITKEILSFTLTEKGAFVREILLQEFA 571 (704)
Q Consensus 538 ~~~~~~~~~~~~~l~~~~s~~g~~~r~~l~~e~~ 571 (704)
+.+.. .+.+.++++..+.+........
T Consensus 470 --~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 496 (517)
T COG0661 470 --DNDRE-----ELSLRSSEELALLLLKAVARLS 496 (517)
T ss_pred --hhhhh-----hhhccccHHHHHHHHHHHHHHH
Confidence 00111 4566677777777777665544
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.2e-75 Score=660.00 Aligned_cols=378 Identities=34% Similarity=0.563 Sum_probs=361.4
Q ss_pred HHHHHHHHHHHhcCchhhhHhHHhhcCCCCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccc
Q 005274 120 VRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAA 199 (704)
Q Consensus 120 ~~a~~lr~~l~~lGp~~IKlGQ~lStr~Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgs 199 (704)
.+|+++|.+|++|||+|||+||+||||+|++|++|++||++|||++||+|+++++++|+++||.+++++|.+||++|+|+
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~Plas 129 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLAS 129 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhh--ccCChHHHHHHHHHHHHHHHHHHHHHhh
Q 005274 200 ASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARK--FNTDLQAVVDEWASSLFRELDYKIEAKN 277 (704)
Q Consensus 200 GS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~--~~~dl~~ivde~~~~l~~Eld~l~Ea~n 277 (704)
||+||||+|+++.+|+.|||||+||++.+.|..|+.+|+.++.++++..+ ...++.++++|+.+.+.+|+||.+|++|
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N 209 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAAN 209 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 99999999999866999999999999999999999999999999998743 2367899999999999999999999999
Q ss_pred HHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh--------hhhHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 278 GLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD--------LYLIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 278 ~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~--------~~l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
+.+|+++|.+.+.++||++||++|+++|||||||+|++++++.. ..+.+.++..++.|++.+||||||||||
T Consensus 210 ~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPG 289 (537)
T PRK04750 210 ASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPG 289 (537)
T ss_pred HHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChH
Confidence 99999999999999999999999999999999999999988532 1477788999999999999999999999
Q ss_pred cEEEecCC----cEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 350 NLFRSYDG----KLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 350 NILv~~dG----~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
||+++++| +++++|||+++.++++.|..+...+.+++++|++.++..+..+|+++++++.+.+..++..++..+++
T Consensus 290 NIlv~~~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~ 369 (537)
T PRK04750 290 NIFVSYDPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFD 369 (537)
T ss_pred HeEEecCCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 99999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.++++++++.++.++++++++|++.+|++++++.|++.++||+++.+||++++++.++||+.+.+....+|.
T Consensus 370 ~~l~~i~~~~~l~~l~~~~r~~~~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~ 441 (537)
T PRK04750 370 KPLAEISFGHVLLRLFNTARRFNVEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPR 441 (537)
T ss_pred CCcccccHHHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChH
Confidence 999999999999999999999999999999999999999999999999999999999999998888888774
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=4e-72 Score=625.21 Aligned_cols=378 Identities=35% Similarity=0.584 Sum_probs=357.3
Q ss_pred hHHHHHHHHHHHhcCchhhhHhHHhhcCCCCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCcccc
Q 005274 119 PVRAAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVA 198 (704)
Q Consensus 119 ~~~a~~lr~~l~~lGp~~IKlGQ~lStr~Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIg 198 (704)
..+|++++.++++|||+|||+||+||||+|++|++||++|++|||++||+|+++++++|+++||.+++++|.+||++|||
T Consensus 47 ~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~pla 126 (437)
T TIGR01982 47 MSRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLA 126 (437)
T ss_pred ccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCccee
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhc--cCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 199 AASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKF--NTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 199 sGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~--~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
+||+||||+|+++ +|+.||||||+|++.+.+..|+.+|+.++.++++..+. ..++..+++++...+.+|+||.+|++
T Consensus 127 saSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~ 205 (437)
T TIGR01982 127 AASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAA 205 (437)
T ss_pred eeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHH
Confidence 9999999999997 89999999999999999999999999999999886432 36889999999999999999999999
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADPHP 348 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~DphP 348 (704)
|+.+|++++++.+.+++|++|+++|++.+|||||++|.++.+.... .+....+..++.|+|.+|++|+||||
T Consensus 206 n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hP 285 (437)
T TIGR01982 206 NASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHP 285 (437)
T ss_pred HHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCc
Confidence 9999999999999999999999999999999999999999887432 24445566788999999999999999
Q ss_pred CcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccC
Q 005274 349 GNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGV 428 (704)
Q Consensus 349 gNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~ 428 (704)
|||+++++|+++++|||+++.+++..+..+..++.+++.+|++.+...+..+|+++++.|...+...+..++..+++.+.
T Consensus 286 gNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~~~~~ 365 (437)
T TIGR01982 286 GNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIFGQPL 365 (437)
T ss_pred ccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred CccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 429 RNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 429 ~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.++++++++.++...++++++++|+++..++|++.++||++..+||++++++.++||+.+.+....+|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~ 434 (437)
T TIGR01982 366 KEISVGRLLAGLFKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPK 434 (437)
T ss_pred hhCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChh
Confidence 999999999999999999999999999999999999999999999999999999999998888877775
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-63 Score=553.84 Aligned_cols=294 Identities=40% Similarity=0.633 Sum_probs=272.0
Q ss_pred HHHHHHHHHhcCchhhhHhHHhhcCCCCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccc
Q 005274 122 AAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAAS 201 (704)
Q Consensus 122 a~~lr~~l~~lGp~~IKlGQ~lStr~Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS 201 (704)
|.+|+++++.|||+|||+||.+|||||++|+||.++|+.|||++||+|++++.+++|+|+|.+++++|.+||++|||+||
T Consensus 94 a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaAS 173 (538)
T KOG1235|consen 94 AERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAAS 173 (538)
T ss_pred HHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 005274 202 LGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKF 281 (704)
Q Consensus 202 ~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f 281 (704)
+||||+|+++ +|+.|||||||||+++.+..|+++++.++.+++++.+ ..++.+++||+++++..|+||.+||+|+++|
T Consensus 174 laQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p-~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~ 251 (538)
T KOG1235|consen 174 LAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFP-DFDLVWLVDEIAKSLPQELDFTKEAKNAERF 251 (538)
T ss_pred hhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCc-CCchhhHHHHHHhhhHhhcchHHHHHhHHHH
Confidence 9999999998 7999999999999999999999999999999998754 3459999999999999999999999999999
Q ss_pred HHHhcCCc---ceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCCCCCc
Q 005274 282 RQLYGGIQ---DVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADPHPGN 350 (704)
Q Consensus 282 ~~~~~~~~---~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~DphPgN 350 (704)
+++|++.. .|+||+|||++|+++|||||||+|.+++|+... .+....+.++..||+.+|||||||||||
T Consensus 252 ~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGN 331 (538)
T KOG1235|consen 252 RENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGN 331 (538)
T ss_pred HHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCc
Confidence 99999998 899999999999999999999999999998542 4666788899999999999999999999
Q ss_pred EEEec----CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH
Q 005274 351 LFRSY----DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG 418 (704)
Q Consensus 351 ILv~~----dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~ 418 (704)
|++++ +++++++|||+++.+++..|..++.+|.+++..|...+....-.+|..+ +.+...+..++..
T Consensus 332 ilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~~~~fa~~l~~ 402 (538)
T KOG1235|consen 332 ILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDLYPLFATALTG 402 (538)
T ss_pred EEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chhhhhhHHHHhC
Confidence 99984 6789999999999999999999999999999977777777777788765 5555555555544
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=6.8e-51 Score=431.89 Aligned_cols=363 Identities=26% Similarity=0.411 Sum_probs=329.4
Q ss_pred HHHHHHHHHhcCchhhhHhHHhhcCCCCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCC-ChhhhhcccCCcccccc
Q 005274 122 AAELRKILVELGPAYVKIAQAVSSRPDLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGL-PIDELFSEISPEPVAAA 200 (704)
Q Consensus 122 a~~lr~~l~~lGp~~IKlGQ~lStr~Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~-~~~eiF~~~~~~PIgsG 200 (704)
-.-|+.+++..||+|||+|||.|||+|+|++++|.+|++||.+++|+++...++.|+.++|. .++++|.+|+++|||+|
T Consensus 121 ~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG 200 (565)
T KOG1236|consen 121 LRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSG 200 (565)
T ss_pred HHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccc
Confidence 34688999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred ccceEEEEEEcc---------------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhcc-CChHHHHHHHHHH
Q 005274 201 SLGQVYQARLRQ---------------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFN-TDLQAVVDEWASS 264 (704)
Q Consensus 201 S~GQVyrA~lk~---------------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~-~dl~~ivde~~~~ 264 (704)
+++|||+|+++. +.+.|||||.+|+++++|++|+.||++.|+..+..+.+. .++...++.|.-.
T Consensus 201 ~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ 280 (565)
T KOG1236|consen 201 CIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVG 280 (565)
T ss_pred hhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHH
Confidence 999999998741 236799999999999999999999999999999776655 6788889999999
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQ 335 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~q 335 (704)
+...+|..+||.|..+|..+|++...|.+|+++..+.++.+|+-+|..|..+..+.+ ..+...++...++|
T Consensus 281 ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkM 360 (565)
T KOG1236|consen 281 LNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKM 360 (565)
T ss_pred HHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999887643 13455788888999
Q ss_pred HHHCCccccCCCCCcEEEec--C-----------------------------------------CcEEEEecCCccccCh
Q 005274 336 LLEKGFYHADPHPGNLFRSY--D-----------------------------------------GKLAYIDFGMMGEFKE 372 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~--d-----------------------------------------G~l~liDFGl~~~l~~ 372 (704)
+.-++|+|+|+|||||++.. . .+++++|-|++..+++
T Consensus 361 l~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs~ 440 (565)
T KOG1236|consen 361 LIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLSH 440 (565)
T ss_pred HHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhccCh
Confidence 99999999999999999842 1 3699999999999999
Q ss_pred hHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh-hccCCccCHHhHHHHHHHHHhhcCCCC
Q 005274 373 ELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV-AKGVRNISFGDLLGNLGATMYKFKFRI 451 (704)
Q Consensus 373 ~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~-~~~~~~~s~~~i~~~L~~~~~~~~~~i 451 (704)
..+.++..++.+++..|.|...+-+....-.....|.+.+...++..+..+- +.+.+.+++++++.++++++++|++++
T Consensus 441 qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V~i 520 (565)
T KOG1236|consen 441 QNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHVRI 520 (565)
T ss_pred hhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhhcccCcCcHHHHHHHHHHHHHHhheee
Confidence 9999999999999999999888888877665667788888888888887665 667889999999999999999999999
Q ss_pred ChhHHHHHHHHHhhhhhhhhcCCCCccccccch
Q 005274 452 PSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYP 484 (704)
Q Consensus 452 P~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P 484 (704)
..+|+.++-+++++||.++++||+++++...-+
T Consensus 521 ds~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~ 553 (565)
T KOG1236|consen 521 DSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTF 553 (565)
T ss_pred ccchHHHHHHHHHHhhhccccCCCcchhhhHHH
Confidence 999999999999999999999999998873333
No 6
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=99.96 E-value=8.5e-29 Score=251.93 Aligned_cols=312 Identities=25% Similarity=0.317 Sum_probs=253.9
Q ss_pred CCCCHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChh
Q 005274 148 DLIPPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQ 227 (704)
Q Consensus 148 Dllp~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~ 227 (704)
.++|+...+.+++.+..+-.+|..+..+++..++|.+|.+-|++||..|.+++|+||||+|+++ +|..||||+|+||+.
T Consensus 8 ~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~-~g~eVavKiQYPGva 86 (363)
T KOG1234|consen 8 SLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLA-DGPEVAVKIQYPGVA 86 (363)
T ss_pred CccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhc-CCCeeeeecCCCchh
Confidence 4799999999999999999999999999999999999999999999999999999999999998 799999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEE
Q 005274 228 AAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLI 307 (704)
Q Consensus 228 ~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLV 307 (704)
+.|..|+..+..++++.... +.+.-+...++-..+.+..|.||.+||..+.+|+.++++.++++||.|+.++|+.++++
T Consensus 87 ~sI~SD~~nl~~lLn~s~ll-PkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvlt 165 (363)
T KOG1234|consen 87 RSIDSDANNLSRLLNFSGLL-PKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVLT 165 (363)
T ss_pred hhccCcHHHHHHHHhhcccc-cccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhhh
Confidence 99999999998887765543 22344667777788889999999999999999999999999999999999999999999
Q ss_pred EEeccCCChhhHHh------hhhHHHHHHHHHHHHHHCCccccCCCCCcEEEecC-CcEEEEecCCccccChhHHHHHHH
Q 005274 308 MEWVEGQKLSEVKD------LYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYD-GKLAYIDFGMMGEFKEELREGFIE 380 (704)
Q Consensus 308 mE~i~G~~L~d~~~------~~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~d-G~l~liDFGl~~~l~~~~r~~~~~ 380 (704)
||++.|.++..... ..+....+...|+.+++..|+..||.-+|+|.+.. .++.++|||.++...+++...++.
T Consensus 166 ~el~~G~pid~~~~~sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F~d~Y~~ 245 (363)
T KOG1234|consen 166 LELGQGLPIDKTAKLSQETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKFIDKYIR 245 (363)
T ss_pred hhhhcCccchhhhcccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEeccccccccHHHHHHHHH
Confidence 99999999887632 23344445567899999999999999999999754 569999999999999999999999
Q ss_pred HHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH-HHHHH--HHHhhc----cCCccCHHhHHHHHHHHHhhcCCCCCh
Q 005274 381 ACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA-LTGVF--QNAVAK----GVRNISFGDLLGNLGATMYKFKFRIPS 453 (704)
Q Consensus 381 ~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~-L~~v~--~~~~~~----~~~~~s~~~i~~~L~~~~~~~~~~iP~ 453 (704)
++.+...+|.++..+--..+||+...-. ..+..+ +..++ +..+.. .+.+-++.+-+.++..+|.++....||
T Consensus 246 ~~~aaa~~dr~~v~e~S~~lgfLtg~Es-~~m~DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~hRL~pPP 324 (363)
T KOG1234|consen 246 LLKAAADRDREGVIEMSRELGFLTGYES-KVMEDAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRHRLCPPP 324 (363)
T ss_pred HHHHHHhcchHHHHHHHHHhcccccchH-HHHHHHhhhHhhhccccccCCCCcCcCccHHHHHHHhhhHHHHhccCCCCc
Confidence 9999999999999888899999865321 112221 22222 111111 122223334455677788888888777
Q ss_pred hH-HHHHHHH
Q 005274 454 YF-SLVIRSL 462 (704)
Q Consensus 454 ~~-~liiRsl 462 (704)
+= ..+.|-+
T Consensus 325 eEtYsLHRkl 334 (363)
T KOG1234|consen 325 EETYSLHRKL 334 (363)
T ss_pred HHHHHHHHHh
Confidence 53 3344443
No 7
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-28 Score=256.32 Aligned_cols=313 Identities=18% Similarity=0.209 Sum_probs=194.5
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+|||.|++|.|+.|+.+.||+.||||.+..-+... -.+++..+|+.+++
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~------------------------------~~akRtlRElklLr 76 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQ------------------------------IDAKRTLRELKLLR 76 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhch------------------------------HHHHHHHHHHHHHH
Confidence 489999999999999999999999999865222211 23578899999999
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
+.+| +++-...+|..|... +--...|+|+|++ +.+|.++.+. .+.-.++.++++++|+.|++||
T Consensus 77 ~~~H-----eNIi~l~di~~p~~~-~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHR 149 (359)
T KOG0660|consen 77 HLRH-----ENIIGLLDIFRPPSR-DKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHR 149 (359)
T ss_pred HhcC-----CCcceEEeecccccc-cccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccccc
Confidence 9987 344444556666222 2235789999999 6677776432 3444788999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH-H
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN-A 423 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~-~ 423 (704)
|+||+|++++.++.+|+||||+++..++.....+ ....+...+|...+.+++..-....+|+|.+++.+++++.+ .
T Consensus 150 DLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~---mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 150 DLKPSNLLLNADCDLKICDFGLARYLDKFFEDGF---MTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred ccchhheeeccCCCEEeccccceeeccccCcccc---hhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCC
Confidence 9999999999999999999999998864311111 11112222223333333322222223333333333343331 1
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
+..|-+.+ .++.-++.-.+.. +++...-+++-..-. ...--|.. ...| ...++...+|.+.++|+
T Consensus 227 lFpG~d~v------~Ql~lI~~~lGtP-~~e~l~~i~s~~ar~--yi~slp~~----p~~~--f~~~fp~a~p~AidLle 291 (359)
T KOG0660|consen 227 LFPGKDYV------HQLQLILELLGTP-SEEDLQKIRSEKARP--YIKSLPQI----PKQP--FSSIFPNANPLAIDLLE 291 (359)
T ss_pred CCCCCchH------HHHHHHHHhcCCC-CHHHHHHhccHHHHH--HHHhCCCC----CCCC--HHHHcCCCCHHHHHHHH
Confidence 22222222 1222222111111 222222222111111 01111111 1122 35677899999999999
Q ss_pred HhhhccccCCCCHHHHHhhhhHHHHHHHhhhhcccCCcchhHhHHHHHhhhcc--ccchhHHHHHHHHHHh
Q 005274 504 ALLYKEGVFRIDRLESLLTESLRARTEKALVKKQTEDTDSRLITKEILSFTLT--EKGAFVREILLQEFAK 572 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s--~~g~~~r~~l~~e~~~ 572 (704)
+||..||.+|+++-|+|.|+++ ...+|.+.||++...... +. ..-+.+|+.+.+|+.+
T Consensus 292 kmL~fdP~kRita~eAL~hPYl----------~~~hdp~dEP~~~~~~~~-~~~~~~~~~~r~~i~~e~~~ 351 (359)
T KOG0660|consen 292 KMLVFDPKKRITAEEALAHPYL----------APYHDPEDEPVCQPIFDS-FEHELTEEELRELIYKEILD 351 (359)
T ss_pred HHhccCccccCCHHHHhcChhh----------hhhcCCccCCCCCCCCcc-ccccccHHHHHHHHHHHHHh
Confidence 9999999999999999999998 567788888877665432 11 1246788888888544
No 8
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.95 E-value=1.7e-27 Score=241.37 Aligned_cols=264 Identities=22% Similarity=0.251 Sum_probs=191.6
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.+|+|.||.||+|++..||+.||||.++.+- .-|.+..+..+|+.+++
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~------------------------------~kdGi~~talREIK~Lq 56 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGN------------------------------AKDGINRTALREIKLLQ 56 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccc------------------------------cccCccHHHHHHHHHHH
Confidence 357999999999999999999999999998652 12344567889999999
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
|.+| +++.++...+++ .+...||.||++. +|..+.+. +-...++..++.++|++.++|
T Consensus 57 el~h-~nIi~LiD~F~~----------~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH 124 (318)
T KOG0659|consen 57 ELKH-PNIIELIDVFPH----------KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH 124 (318)
T ss_pred HccC-cchhhhhhhccC----------CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9997 555555443333 5677899999964 66665431 122256677889999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
||+||.|+|++++|.+|+.|||+++.+....+.... .++.+.|.+. +.+ .|. +.
T Consensus 125 RDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~----~V~TRWYRAP-ELL--fGs-------------------r~ 178 (318)
T KOG0659|consen 125 RDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH----QVVTRWYRAP-ELL--FGS-------------------RQ 178 (318)
T ss_pred ccCCccceEEcCCCcEEeecccchhccCCCCccccc----ceeeeeccCh-HHh--ccc-------------------hh
Confidence 999999999999999999999999988766543221 1334444322 111 121 45
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCC-hhHHHHHHHHHhh---hhhhhhcCCCCccccccchhH-HhhhccCCChHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIP-SYFSLVIRSLAVL---EGIAISSNPNYKVLGSTYPYI-ARKVLTDSSPQL 498 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP-~~~~liiRsl~~l---EGi~~~ldP~~~i~~~a~P~i-~r~ll~d~sp~l 498 (704)
|+.++|.|++|||+.+|+....-++-.-. .++..|+|++++- ++-..+--|+|.-+. .+|.. ...++...+.++
T Consensus 179 Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-~~P~~~~~~lf~aas~d~ 257 (318)
T KOG0659|consen 179 YGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-QFPKPPLNNLFPAASSDA 257 (318)
T ss_pred cCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh-cCCCCccccccccccHHH
Confidence 77889999999999888642211111111 3578888888873 444555566766554 23433 344888999999
Q ss_pred HHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 499 KSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
.|+|..|+.+||..||++-|+|.|++|.
T Consensus 258 ldLl~~m~~ynP~~Rita~qaL~~~yf~ 285 (318)
T KOG0659|consen 258 LDLLSKMLTYNPKKRITASQALKHPYFK 285 (318)
T ss_pred HHHHHhhhccCchhcccHHHHhcchhhh
Confidence 9999999999999999999999999983
No 9
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=6.1e-26 Score=246.39 Aligned_cols=279 Identities=19% Similarity=0.238 Sum_probs=182.3
Q ss_pred HhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHH
Q 005274 180 ELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVD 259 (704)
Q Consensus 180 elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivd 259 (704)
-++..-.+.|+.++ .||.|.|||||+|+...||+.||+|.++-+.. -+
T Consensus 110 ~w~~r~~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~------------------------------~~ 157 (560)
T KOG0600|consen 110 GWGPRRADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNE------------------------------KE 157 (560)
T ss_pred cccccchHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccC------------------------------CC
Confidence 34444567788884 59999999999999999999999999874322 23
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh----------hhhHHHHH
Q 005274 260 EWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD----------LYLIEVGV 329 (704)
Q Consensus 260 e~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~----------~~l~e~~v 329 (704)
+|.....+||.+++.+.|. ++.+ ...++ +...++..|||+||++. +|.-+.. .+....++
T Consensus 158 ~~~~t~~REI~ILr~l~Hp-NIik----L~eiv----t~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQL 227 (560)
T KOG0600|consen 158 GFPITAIREIKILRRLDHP-NIIK----LEEIV----TSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQL 227 (560)
T ss_pred cchHHHHHHHHHHHhcCCC-cccc----eeeEE----EecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHH
Confidence 6667888999999988872 2221 12222 22247789999999975 4444422 12333566
Q ss_pred HHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccch
Q 005274 330 YCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEK 409 (704)
Q Consensus 330 ~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~ 409 (704)
..+|.++|..||+|||+|..|||++.+|.+||.|||+++.++......+..-+ +++-|-+||.-.
T Consensus 228 l~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rV---------------vTLWYRpPELLL 292 (560)
T KOG0600|consen 228 LEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRV---------------VTLWYRPPELLL 292 (560)
T ss_pred HHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccce---------------EEeeccChHHhc
Confidence 66777779999999999999999999999999999999977766544332222 222222322211
Q ss_pred HHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCC-hhHHHHHHHHHhh-hhhh-hhcCCCCccccccchhH
Q 005274 410 EAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIP-SYFSLVIRSLAVL-EGIA-ISSNPNYKVLGSTYPYI 486 (704)
Q Consensus 410 ~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP-~~~~liiRsl~~l-EGi~-~~ldP~~~i~~~a~P~i 486 (704)
. ...|+.++|.|+.|||+.+|+..-.-++-+-. .++-.|++.++.- |... ..--|.+..+....||-
T Consensus 293 G----------~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~ 362 (560)
T KOG0600|consen 293 G----------ATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYK 362 (560)
T ss_pred C----------CcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCccc
Confidence 1 02344455666666666555432111111100 2344455554431 1111 11225556666666652
Q ss_pred --HhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 487 --ARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 487 --~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+....+.++.+.++|..||..||.+|.++.++|-+++|
T Consensus 363 r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 363 RRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred chHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 333477899999999999999999999999999999998
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.93 E-value=2.4e-25 Score=235.13 Aligned_cols=234 Identities=20% Similarity=0.296 Sum_probs=163.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||+|+-|.||+++++.||+.+|+|+++-+... ++.+++.+|++++++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~-------------------------------~~~~Qi~rEl~il~~ 133 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP-------------------------------ALQKQILRELEILRS 133 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH-------------------------------HHHHHHHHHHHHHhh
Confidence 4699999999999999999999999998644332 566789999999998
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeeccc-ceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTT-RKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss-~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H 343 (704)
..+ +.|+--+-.+.... ...++||||+|++|.++... .-+..++..+|.|||+ ++|+|
T Consensus 134 ~~s-----------pyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIH 202 (364)
T KOG0581|consen 134 CQS-----------PYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIH 202 (364)
T ss_pred CCC-----------CCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeee
Confidence 854 33322222222234 47899999999999998652 1233678899999995 99999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHH----HHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
||+||.|||++..|++||||||.++.+......++++ +.++-+.++.|+...|+|++|..
T Consensus 203 RDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLs---------------- 266 (364)
T KOG0581|consen 203 RDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLS---------------- 266 (364)
T ss_pred ccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHH----------------
Confidence 9999999999999999999999999887765444444 33344555566666777777752
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCC----hhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC-C
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIP----SYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD-S 494 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP----~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d-~ 494 (704)
+-++.. -+||+..| .....++-.+ . .+|.-.. | .+ .
T Consensus 267 -----------------llE~a~--GrfP~~~~~~~~~~~~~Ll~~I------v--~~ppP~l-----P-------~~~f 307 (364)
T KOG0581|consen 267 -----------------LLELAI--GRFPYPPPNPPYLDIFELLCAI------V--DEPPPRL-----P-------EGEF 307 (364)
T ss_pred -----------------HHHHhh--CCCCCCCcCCCCCCHHHHHHHH------h--cCCCCCC-----C-------cccC
Confidence 112211 11222221 1222121111 1 1121111 1 23 7
Q ss_pred ChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 495 SPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 495 sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
||++++.+...|.|||..||+..|-|-|+.+
T Consensus 308 S~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 308 SPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 9999999999999999999999998888876
No 11
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.92 E-value=1.8e-25 Score=232.41 Aligned_cols=266 Identities=21% Similarity=0.294 Sum_probs=174.6
Q ss_pred hhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 188 LFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 188 iF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
-|+.+ +-|++|+||.||||++++|++.||+|.+++.-+. +.|.-.-.+
T Consensus 77 efe~l--nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek------------------------------~GFPItsLR 124 (419)
T KOG0663|consen 77 EFEKL--NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK------------------------------EGFPITSLR 124 (419)
T ss_pred HHHHH--hhcccCcceeEEEeccCCcceeEEeeeccccccc------------------------------CCCcchhHH
Confidence 35666 4599999999999999999999999998865322 234445678
Q ss_pred HHHHHHHHhhHHHHHHHhcCCccee-eceeee-ecccceeEEEEeccCCChhhHHh----------hhhHHHHHHHHHHH
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVL-IPEMYV-EQTTRKVLIMEWVEGQKLSEVKD----------LYLIEVGVYCSFNQ 335 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~-e~ss~~vLVmE~i~G~~L~d~~~----------~~l~e~~v~~~L~q 335 (704)
|++.+..++| ++|+ |-+|+. ..-+..++|||||+. +|..+.+ .+....++..++++
T Consensus 125 EIniLl~~~H-----------~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~ 192 (419)
T KOG0663|consen 125 EINILLKARH-----------PNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKH 192 (419)
T ss_pred HHHHHHhcCC-----------CCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHH
Confidence 8888888776 3322 222222 122457899999975 4544432 13344678889999
Q ss_pred HHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 336 LLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
||.+.|+|||+||.|+|++.+|.++++|||+++.+....+ .+..+++ ++-|-+|+.-..
T Consensus 193 lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k-~~T~lVV---------------TLWYRaPELLLG----- 251 (419)
T KOG0663|consen 193 LHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK-PYTPLVV---------------TLWYRAPELLLG----- 251 (419)
T ss_pred HhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc-cCcceEE---------------EeeecCHHHhcC-----
Confidence 9999999999999999999999999999999998876521 1222222 222222221110
Q ss_pred HHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCC-ChhHHHHHHHHHhhhhhhhhcCCCCcccc-------ccchhH-
Q 005274 416 LTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRI-PSYFSLVIRSLAVLEGIAISSNPNYKVLG-------STYPYI- 486 (704)
Q Consensus 416 L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~i-P~~~~liiRsl~~lEGi~~~ldP~~~i~~-------~a~P~i- 486 (704)
...|+.++|.||+|||+.+++..-.-++-.- ..++..|++-+++ ......|.|..+. ..+||-
T Consensus 252 -----~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt---Pte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 252 -----AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT---PSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred -----CcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC---CccccCCCccccchhhccccCCCCchh
Confidence 0234556677777777777664322222211 1234444444443 3334455555433 234552
Q ss_pred -HhhhccC-CChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 487 -ARKVLTD-SSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 487 -~r~ll~d-~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
.+++... .|....++|+.||.+||..|+++-++|-|.+|+
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~ 365 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFR 365 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccc
Confidence 3333333 468899999999999999999999999999983
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.92 E-value=3.8e-25 Score=227.53 Aligned_cols=266 Identities=15% Similarity=0.181 Sum_probs=168.6
Q ss_pred hcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 189 FSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 189 F~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
|+.+. .+|+||+|.||+|+.+.||+.||||...-.-.+ ..+.+...+|
T Consensus 4 YE~Lg--kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd------------------------------~~VkKIAlRE 51 (396)
T KOG0593|consen 4 YEKLG--KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD------------------------------PVVKKIALRE 51 (396)
T ss_pred Hhhhh--ccccCcceEEEEeccCCcccEEEEEeeccCCcc------------------------------HHHHHHHHHH
Confidence 44453 489999999999999999999999986422110 1345667899
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh---HHHHHHHHHHHHHHC
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL---IEVGVYCSFNQLLEK 339 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l---~e~~v~~~L~qLh~~ 339 (704)
+.+++..+| +++..+..-+. -..+.+||+|||+-.-|.+++.. .+ .-.++..++.++|++
T Consensus 52 IrmLKqLkH-~NLVnLiEVFr----------rkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 52 IRMLKQLKH-ENLVNLIEVFR----------RKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred HHHHHhccc-chHHHHHHHHH----------hcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 999999986 34443332221 14577899999999888877542 11 225667788899999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHH-------HHhhcc-ChhHHHHHHHhcCCCCCccchHH
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEAC-------LHLVNR-DFDALAKDFVTLGLLPPTAEKEA 411 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~-------~~l~~~-d~~~la~d~~slG~l~p~~d~~~ 411 (704)
+++|||+||+|||++.+|.+|+||||+++.+... -..|.+.+ +.++-+ -.|+.+.|+|+.||+
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv-------- 191 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP-GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCV-------- 191 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCC-cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHH--------
Confidence 9999999999999999999999999999988732 11222211 112222 233444455555543
Q ss_pred HHHHHHHHHHH-HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhh
Q 005274 412 VTKALTGVFQN-AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKV 490 (704)
Q Consensus 412 i~~~L~~v~~~-~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~l 490 (704)
+.+++.+ .+-.|-+++ ++|..++. ---.++|....++.+--..-|+...--++... +++-
T Consensus 192 ----~aEl~~G~pL~PG~SDi------DQLy~I~k-tLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep--------Le~k 252 (396)
T KOG0593|consen 192 ----FAELLTGEPLWPGRSDI------DQLYLIRK-TLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP--------LERK 252 (396)
T ss_pred ----HHHHhcCCcCCCCcchH------HHHHHHHH-HHcccCHHHHHHhccCCceeeeecCCCCCccc--------hhhh
Confidence 2222221 111111221 12222211 12234445544544444444443332223333 3334
Q ss_pred ccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 491 LTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 491 l~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
..+.++-+.|+++..|..||..||+--+-|-|++|
T Consensus 253 ~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yF 287 (396)
T KOG0593|consen 253 YPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYF 287 (396)
T ss_pred cccchHHHHHHHHHHhcCCccccccHHHHhcChHH
Confidence 44778899999999999999999999888888887
No 13
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.92 E-value=8.5e-26 Score=209.25 Aligned_cols=118 Identities=47% Similarity=0.780 Sum_probs=112.8
Q ss_pred HHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhc-cCChHHH
Q 005274 179 QELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKF-NTDLQAV 257 (704)
Q Consensus 179 ~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~-~~dl~~i 257 (704)
++||.+++++|++||++|||+||+||||+|+++ +|++||||||||++.+.+..|+.+|+.+++++++.... ..++..+
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~ 79 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEI 79 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHH
Confidence 479999999999999999999999999999998 79999999999999999999999999999999988544 5899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceee
Q 005274 258 VDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMY 297 (704)
Q Consensus 258 vde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~ 297 (704)
++++.+.+.+|+||.+|++|+++|++++.+.+.++||++|
T Consensus 80 ~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 80 VDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 9999999999999999999999999999999999999987
No 14
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.91 E-value=1.7e-24 Score=228.11 Aligned_cols=268 Identities=22% Similarity=0.274 Sum_probs=179.0
Q ss_pred hhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHH
Q 005274 187 ELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLF 266 (704)
Q Consensus 187 eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~ 266 (704)
+.|+.++ .+|.|+||.||+|+.+.+|+.||+|+++-..++ +.......
T Consensus 11 ~~~~~~e--klGeGtyg~Vykar~~~~g~~VALKkirl~~~~------------------------------EG~P~tai 58 (323)
T KOG0594|consen 11 FDYEKVE--KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------------------------------EGVPSTAI 58 (323)
T ss_pred HHHHHHH--HhCCCCceEEEEEEEecCCCEEEEEEEeccccc------------------------------cCCCchhh
Confidence 4455564 499999999999999999999999998733211 11234667
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecc-----cceeEEEEeccCCChhhHHhh-------------hhHHHH
Q 005274 267 RELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQT-----TRKVLIMEWVEGQKLSEVKDL-------------YLIEVG 328 (704)
Q Consensus 267 ~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~s-----s~~vLVmE~i~G~~L~d~~~~-------------~l~e~~ 328 (704)
+|+.++++.+|... -+..-.+....+ +..+||+||++- +|.++.+. +..-.|
T Consensus 59 REisllk~L~~~~~---------iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Q 128 (323)
T KOG0594|consen 59 REISLLKRLSHANH---------IVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQ 128 (323)
T ss_pred HHHHHHHHhCCCcc---------eEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHH
Confidence 89999999888421 222223333333 277899999964 55554321 122367
Q ss_pred HHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccc
Q 005274 329 VYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAE 408 (704)
Q Consensus 329 v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d 408 (704)
+..++.++|++||+|||+||.|||++++|.+|++|||+++...-..+. +...++++-+-+|++
T Consensus 129 ll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~----------------yt~evvTlWYRaPEv- 191 (323)
T KOG0594|consen 129 LLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT----------------YTPEVVTLWYRAPEV- 191 (323)
T ss_pred HHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc----------------ccccEEEeeccCHHH-
Confidence 888999999999999999999999999999999999999865533321 122223333444443
Q ss_pred hHHHHHHHHHHHH-HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhH---HHHHHHHHhh---hhhhhhcCCCCcc-cc
Q 005274 409 KEAVTKALTGVFQ-NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYF---SLVIRSLAVL---EGIAISSNPNYKV-LG 480 (704)
Q Consensus 409 ~~~i~~~L~~v~~-~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~---~liiRsl~~l---EGi~~~ldP~~~i-~~ 480 (704)
+++ ..|+.++|.|++|||+.++... +-.|.--.++ ..|++.+++- .+-....-|+++. +.
T Consensus 192 ----------LlGs~~Ys~~vDiWs~GcIfaEm~~~--~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~ 259 (323)
T KOG0594|consen 192 ----------LLGSTSYSTSVDIWSLGCIFAEMFTR--RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP 259 (323)
T ss_pred ----------hcCCCcCCCCcchHhHHHHHHHHHhC--CCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCc
Confidence 222 2467778888888888888762 2223323333 3444444432 2223334455552 22
Q ss_pred ccc-hhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 481 STY-PYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 481 ~a~-P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
... |-.........+++..+++.+||.++|+.|+++..+|-|++|
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf 305 (323)
T KOG0594|consen 260 KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYF 305 (323)
T ss_pred CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhh
Confidence 222 333445556667899999999999999999999999999998
No 15
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.6e-24 Score=228.56 Aligned_cols=258 Identities=21% Similarity=0.237 Sum_probs=178.1
Q ss_pred CCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 193 SPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 193 ~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.+-+|+||||.||+|++..+++.||||..-++-+- --+|+.++
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------------------------------------knrEl~im 71 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------------------------------------KNRELQIM 71 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------------------------------------CcHHHHHH
Confidence 347899999999999999999999999987654221 12566666
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeeccc-c----eeEEEEeccCCChhhHHh-------------hhhHHHHHHHHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTT-R----KVLIMEWVEGQKLSEVKD-------------LYLIEVGVYCSFN 334 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss-~----~vLVmE~i~G~~L~d~~~-------------~~l~e~~v~~~L~ 334 (704)
+.+.| ++|+--..++..++ . ..|||||++. +|.++.+ .++...|+.+++.
T Consensus 72 ~~l~H-----------pNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~ 139 (364)
T KOG0658|consen 72 RKLDH-----------PNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLA 139 (364)
T ss_pred HhcCC-----------cCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHH
Confidence 65555 56554444433222 2 2399999964 6666543 1466789999999
Q ss_pred HHHHCCccccCCCCCcEEEecC-CcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHH
Q 005274 335 QLLEKGFYHADPHPGNLFRSYD-GKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVT 413 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~d-G~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~ 413 (704)
+||+.|++|||+||.|||++++ |.+||||||.++.+...... ...+...||+..+-+ +|+
T Consensus 140 yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn------iSYicSRyYRaPELi--fga----------- 200 (364)
T KOG0658|consen 140 YLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN------ISYICSRYYRAPELI--FGA----------- 200 (364)
T ss_pred HHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc------eeEEEeccccCHHHH--cCc-----------
Confidence 9999999999999999999987 99999999999988765432 112233444444332 232
Q ss_pred HHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCC-hhHHHHHHHHHhh-hhhhhhcCCCCcccc--ccc-hhHHh
Q 005274 414 KALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIP-SYFSLVIRSLAVL-EGIAISSNPNYKVLG--STY-PYIAR 488 (704)
Q Consensus 414 ~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP-~~~~liiRsl~~l-EGi~~~ldP~~~i~~--~a~-P~i~r 488 (704)
..|+..+|.||.||++.+|+..-.-++-.-. ..+..|++.+++- +.-...++|++.-.. ... ....+
T Consensus 201 --------~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~ 272 (364)
T KOG0658|consen 201 --------TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK 272 (364)
T ss_pred --------cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccccee
Confidence 2245567777888877777643222222111 3578888888872 223456777754221 111 12223
Q ss_pred hhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 489 KVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 489 ~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+....+|++.+++.++|.++|..|.+++|+|.|+.|
T Consensus 273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fF 309 (364)
T KOG0658|consen 273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFF 309 (364)
T ss_pred ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhh
Confidence 4667889999999999999999999999999999987
No 16
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.91 E-value=1.9e-23 Score=222.59 Aligned_cols=138 Identities=22% Similarity=0.292 Sum_probs=111.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||+||||.||+|+++.+|..||||.+... .+..+..+.+..|+.+++|
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~------------------------------~l~~k~~e~L~~Ei~iLke 65 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK------------------------------KLNKKLVELLLSEIKILKE 65 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh------------------------------ccCHHHHHHHHHHHHHHHh
Confidence 3499999999999999999999999987532 1112445677889999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ++|+--.-..+..+..+||||||+|++|.++... +..-.++..+++.||+.+|+|||
T Consensus 66 l~H-----------~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRD 134 (429)
T KOG0595|consen 66 LKH-----------PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRD 134 (429)
T ss_pred cCC-----------cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 987 4555444455667789999999999999998653 22336777889999999999999
Q ss_pred CCCCcEEEecC------CcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYD------GKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~d------G~l~liDFGl~~~l~~~ 373 (704)
+||.|||++.. -.+||.|||+++.+.+.
T Consensus 135 LKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 135 LKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred CCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 99999999765 45999999999998864
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=226.79 Aligned_cols=271 Identities=17% Similarity=0.262 Sum_probs=170.6
Q ss_pred hhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHH
Q 005274 187 ELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLF 266 (704)
Q Consensus 187 eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~ 266 (704)
+.|.-+ +.||.|+||.||+|+-+.+|+.||||.++..... +. |. .-.
T Consensus 10 ~RY~~i--~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-------------------------~e----e~--~nL 56 (538)
T KOG0661|consen 10 DRYTVI--RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-------------------------WE----EC--MNL 56 (538)
T ss_pred HHHHHH--HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-------------------------HH----HH--HHH
Confidence 334444 4599999999999999999999999987532111 00 00 113
Q ss_pred HHHHHHHHHh-hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHH
Q 005274 267 RELDYKIEAK-NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQ 335 (704)
Q Consensus 267 ~Eld~l~Ea~-n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~q 335 (704)
+|+..++... | .++ |.+-+++.+-.+..++||||++. .|.++.+. +-+-.++..+|.+
T Consensus 57 REvksL~kln~h-pni---------ikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~h 125 (538)
T KOG0661|consen 57 REVKSLRKLNPH-PNI---------IKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAH 125 (538)
T ss_pred HHHHHHHhcCCC-Ccc---------hhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHH
Confidence 5555555544 2 111 22233444444578899999964 67766432 1223688889999
Q ss_pred HHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 336 LLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
+|.+||||||+||+|||++...-|||.|||+++++....-+ ...+...+|+..+.+..-|+....+|++++++.
T Consensus 126 iHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY------TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI 199 (538)
T KOG0661|consen 126 IHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY------TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCI 199 (538)
T ss_pred HHhcCcccccCChhheEecccceeEecccccccccccCCCc------chhhhcccccchHHhhhccccCCchHHHHHHHH
Confidence 99999999999999999998889999999999998654321 112334445555555556665555555555555
Q ss_pred HHHHHH-HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhh--hhhhcCCCCccccccchhHHhhhcc
Q 005274 416 LTGVFQ-NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEG--IAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 416 L~~v~~-~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEG--i~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
+.++.. +.+..|.++++ ++..++--. +-|..= +. .|| ++..+ +|++ ....|.-...+++
T Consensus 200 ~aEl~sLrPLFPG~sE~D------qi~KIc~VL--GtP~~~-----~~--~eg~~La~~m--nf~~-P~~~~~~l~~L~p 261 (538)
T KOG0661|consen 200 MAELYSLRPLFPGASEID------QIYKICEVL--GTPDKD-----SW--PEGYNLASAM--NFRF-PQVKPSPLKDLLP 261 (538)
T ss_pred HHHHHHhcccCCCCcHHH------HHHHHHHHh--CCCccc-----cc--hhHHHHHHHh--ccCC-CcCCCCChHHhCc
Confidence 444432 22233333321 222221111 111000 00 011 12222 3332 3445667888999
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
..++++.+++.+||..||..|.++-|+|-|++|
T Consensus 262 ~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 262 NASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred ccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 999999999999999999999999999999987
No 18
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=2e-23 Score=222.22 Aligned_cols=244 Identities=18% Similarity=0.196 Sum_probs=155.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.+|+|.||.|-.|..++||+.||||++....-..-. . +.. -...+.+|+++++
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s-------------~----------~~~--~~~~v~~EieILk 231 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCS-------------R----------AIA--KTRDVQNEIEILK 231 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhccccc-------------c----------ccc--chhhhHHHHHHHH
Confidence 46899999999999999999999999998743110000 0 000 0012457777777
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+.| |+|+--+-+.+-....|+||||++|+.|.+..- .+..-.++..+++|||+.||+||
T Consensus 232 kL~H-----------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HR 300 (475)
T KOG0615|consen 232 KLSH-----------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHR 300 (475)
T ss_pred hcCC-----------CCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccc
Confidence 7666 666666666666667799999999999998642 13445788899999999999999
Q ss_pred CCCCCcEEEecC---CcEEEEecCCccccChh-HHHHHHHH----HHHhh-ccC--hhHHHHHHHhcCCCCCccchHHHH
Q 005274 345 DPHPGNLFRSYD---GKLAYIDFGMMGEFKEE-LREGFIEA----CLHLV-NRD--FDALAKDFVTLGLLPPTAEKEAVT 413 (704)
Q Consensus 345 DphPgNILv~~d---G~l~liDFGl~~~l~~~-~r~~~~~~----~~~l~-~~d--~~~la~d~~slG~l~p~~d~~~i~ 413 (704)
|+||+|||+..+ ..+|+.|||+++...+. ...++|+. .++++ +++ ++.-..|+|++||+
T Consensus 301 DiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcv---------- 370 (475)
T KOG0615|consen 301 DIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCV---------- 370 (475)
T ss_pred cCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccce----------
Confidence 999999999766 78999999999987543 33444442 22222 222 22224456666654
Q ss_pred HHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC
Q 005274 414 KALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 414 ~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d 493 (704)
+.-.+. ..||+-.... ....-|-|... .|.+-. |+. ..
T Consensus 371 -----------------------LfvcLs-------G~pPFS~~~~-~~sl~eQI~~G---~y~f~p---~~w-----~~ 408 (475)
T KOG0615|consen 371 -----------------------LFVCLS-------GYPPFSEEYT-DPSLKEQILKG---RYAFGP---LQW-----DR 408 (475)
T ss_pred -----------------------EEEEec-------cCCCcccccC-CccHHHHHhcC---cccccC---hhh-----hh
Confidence 211110 1111100000 00000000000 111110 111 25
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.|.++++++..||..||..|.+..|+|-|+-+
T Consensus 409 Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 409 ISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred hhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 68899999999999999999999999999977
No 19
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.89 E-value=2e-23 Score=220.57 Aligned_cols=228 Identities=18% Similarity=0.255 Sum_probs=153.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.||||+|+.++.+.||+.+|+||+++.. | ++ ..-.+.+..|.+++.+
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~---i-------------v~-------------~~e~~~~~~Er~IL~~ 81 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK---I-------------VE-------------KKEVRHTKAERNILSK 81 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhH---h-------------hh-------------hhhHHHHHHHHHHHHh
Confidence 68999999999999999999999999987421 0 00 0123566778777777
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| |.++--..-++..++.|||+||+.|+.|.-... .++.-..+.++|.+||+.||+|||
T Consensus 82 v~h-----------PFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRD 150 (357)
T KOG0598|consen 82 IKH-----------PFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRD 150 (357)
T ss_pred CCC-----------CcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 665 554444445566788999999999999876543 134456788999999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh--HHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE--LREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~--~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+||+|||++.+|+++++|||+++..-.. ...++++ +.-+++||+- ....
T Consensus 151 lKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcG------------------T~eYmAPEil-----------~~~g 201 (357)
T KOG0598|consen 151 LKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCG------------------TPEYMAPEIL-----------LGKG 201 (357)
T ss_pred CCHHHeeecCCCcEEEeccccchhcccCCCccccccC------------------CccccChHHH-----------hcCC
Confidence 9999999999999999999999853222 1112221 1223333321 1123
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc-CCChHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT-DSSPQLKSSL 502 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~-d~sp~lr~lL 502 (704)
++..+|+|++|.++.+++ ...||+...-.+-+ .+.|...- ..... ..|+++++++
T Consensus 202 y~~~vDWWsLGillYeML-------~G~pPF~~~~~~~~--~~~I~~~k---------------~~~~p~~ls~~ardll 257 (357)
T KOG0598|consen 202 YDKAVDWWSLGILLYEML-------TGKPPFYAEDVKKM--YDKILKGK---------------LPLPPGYLSEEARDLL 257 (357)
T ss_pred CCcccchHhHHHHHHHHh-------hCCCCCcCccHHHH--HHHHhcCc---------------CCCCCccCCHHHHHHH
Confidence 455667777666555554 36676653221111 11111110 01112 3689999999
Q ss_pred HHhhhccccCCCC
Q 005274 503 VALLYKEGVFRID 515 (704)
Q Consensus 503 ~~lL~~d~~~R~~ 515 (704)
+.||.+||..|+.
T Consensus 258 ~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 258 KKLLKRDPRQRLG 270 (357)
T ss_pred HHHhccCHHHhcC
Confidence 9999999999985
No 20
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.89 E-value=4e-23 Score=226.26 Aligned_cols=255 Identities=19% Similarity=0.249 Sum_probs=160.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|+||+||.|+-+.||+.+|+|++++.. +. -.+-.+.+..|-|++.|
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~-------M~----------------------~~~Qv~hV~aERdiL~~ 197 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKSE-------ML----------------------KKNQVEHVRAERDILAE 197 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHHH-------HH----------------------hhhhHHHHHHHHHHhhh
Confidence 78999999999999999999999999987421 10 01222456667777776
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
+.. +.|+-...-++.....||||||++||++..+... ++.-....+++.-||..||+|||
T Consensus 198 ~ds-----------~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRD 266 (550)
T KOG0605|consen 198 VDS-----------PWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRD 266 (550)
T ss_pred cCC-----------CcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 443 3443332233445668999999999999877431 33335566788999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHH-------HHHHhhccChhH-----------------------HH-
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE-------ACLHLVNRDFDA-----------------------LA- 394 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~-------~~~~l~~~d~~~-----------------------la- 394 (704)
|||+|+|++.+|+++|.|||++.-+....+..+.. ........++.. ++
T Consensus 267 IKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~ 346 (550)
T KOG0605|consen 267 IKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAY 346 (550)
T ss_pred CChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999997766544433211 000001111110 00
Q ss_pred HHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHH----HHHHHhhhhhhh
Q 005274 395 KDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLV----IRSLAVLEGIAI 470 (704)
Q Consensus 395 ~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~li----iRsl~~lEGi~~ 470 (704)
..+.+..+++||+ +.+.-++...|.||+|+|+.+++ ++.||+.+.- .|.+..-. .
T Consensus 347 StVGTPDYiAPEV-----------ll~kgY~~~cDwWSLG~ImyEmL-------vGyPPF~s~tp~~T~rkI~nwr---~ 405 (550)
T KOG0605|consen 347 STVGTPDYIAPEV-----------LLGKGYGKECDWWSLGCIMYEML-------VGYPPFCSETPQETYRKIVNWR---E 405 (550)
T ss_pred cccCCccccchHH-----------HhcCCCCccccHHHHHHHHHHHH-------hCCCCCCCCCHHHHHHHHHHHh---h
Confidence 1122333343332 23345677889999888776655 4677765322 12211100 0
Q ss_pred hcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCC--HHHHH-hhhhH
Q 005274 471 SSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRID--RLESL-LTESL 525 (704)
Q Consensus 471 ~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~--rle~L-l~~~~ 525 (704)
+ +. .| --.+.|++++|++.++|+ ||..|+. -.+.+ -|+.|
T Consensus 406 ~----l~-----fP-----~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 406 T----LK-----FP-----EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFF 448 (550)
T ss_pred h----cc-----CC-----CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCcc
Confidence 0 00 01 112467999999999999 9998876 33333 45665
No 21
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.89 E-value=5.8e-23 Score=211.16 Aligned_cols=168 Identities=18% Similarity=0.211 Sum_probs=120.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..+|.||||.||.++.+.+|..+|+|+.... +.+. | ...+.+..|...++.
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~--~vVk-----l----------------------KQveH~~nEk~vL~~ 100 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ--KVVK-----L----------------------KQVEHTHNEKRVLKA 100 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHH--HHHH-----H----------------------HHHHHHhhHHHHHhh
Confidence 5799999999999999999999999998632 0000 0 111233344333333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
..+ |.+..-.--+...+..+|||||++|+.|..+.+. ++...++.+++++||+.++++||
T Consensus 101 v~~-----------PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRD 169 (355)
T KOG0616|consen 101 VSH-----------PFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRD 169 (355)
T ss_pred ccC-----------ceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeecc
Confidence 332 4443333234456778999999999999988653 46668999999999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHH----HHHHhhccChhHHHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE----ACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~----~~~~l~~~d~~~la~d~~slG~l 403 (704)
+||+|||++.+|.|+++|||.++.++.. ..++|+ +.++++....++.+.|+|++|++
T Consensus 170 LKPENiLlD~~G~iKitDFGFAK~v~~r-T~TlCGTPeYLAPEii~sk~ynkavDWWalGVL 230 (355)
T KOG0616|consen 170 LKPENLLLDQNGHIKITDFGFAKRVSGR-TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVL 230 (355)
T ss_pred CChHHeeeccCCcEEEEeccceEEecCc-EEEecCCccccChHHhhcCCCCcchhHHHHHHH
Confidence 9999999999999999999999998876 233333 34445555555556666666654
No 22
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.8e-22 Score=224.17 Aligned_cols=234 Identities=18% Similarity=0.238 Sum_probs=169.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.-||+|+|+.||+++...+|+.||+||+....-. -....+.+.+|+.+.+.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-----------------------------k~~~reKv~~EIeIHr~ 74 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-----------------------------KPKQREKVLNEIEIHRS 74 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-----------------------------CcchHHHHHHHHHHHHh
Confidence 5799999999999999889999999998632100 01234577888888888
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
++| ++|+--.-++|.++..|+|.|+|+.+.|..+.+. +..-.+|.++++|||+.||+|||
T Consensus 75 L~H-----------pnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 75 LKH-----------PNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred cCC-----------CcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 877 5666666678889999999999999999988652 23337899999999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh--HHHHHHH----HHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE--LREGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~--~r~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+|-||||++.+-+|||+|||++..+..+ .+.++|+ ..++++++...++..|+|++||+
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcv---------------- 207 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCV---------------- 207 (592)
T ss_pred cchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhH----------------
Confidence 9999999999999999999999998743 3334443 34555555555566666666654
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
+.-| -+.-||+-..-++.. ..-| -.-+|.+ | ++.|++++
T Consensus 208 -----------------mYtL-------L~G~PPFetk~vket--y~~I---k~~~Y~~-----P-------~~ls~~A~ 246 (592)
T KOG0575|consen 208 -----------------MYTL-------LVGRPPFETKTVKET--YNKI---KLNEYSM-----P-------SHLSAEAK 246 (592)
T ss_pred -----------------HHhh-------hhCCCCcccchHHHH--HHHH---HhcCccc-----c-------cccCHHHH
Confidence 2222 234444433221111 0111 0112322 2 36799999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++.||..||..|.+.-+.|-|+.|
T Consensus 247 dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 247 DLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred HHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 99999999999999999999989876
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-21 Score=214.64 Aligned_cols=253 Identities=16% Similarity=0.218 Sum_probs=164.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||.|||.+|++|+.+.+++++||||..+.. |+|. .-.+-+..|-+.+.
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~---------Iike--------------------~KvkYV~~Ek~~l~- 128 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY---------IIKE--------------------KKVKYVTREKEALT- 128 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH---------HHhh--------------------cccchhhHHHHHHH-
Confidence 45999999999999999999999999975310 0000 00011222322222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+.++|.|+-...-++.....|+|+||+++|.|-++... +....++..++++||++||+|||
T Consensus 129 ---------~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRD 199 (604)
T KOG0592|consen 129 ---------QLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRD 199 (604)
T ss_pred ---------HhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 233567766555556667789999999999999887642 45557888999999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhH--HHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDA--LAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~--la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+||+|||++.||+++|.|||.++.+++.....- +-...++.. ...-+.+.-|+.||.-.+ +.
T Consensus 200 lKPENILLd~dmhikITDFGsAK~l~~~~~~~~-----~~~~~~~a~s~~~SFVGTAeYVSPElL~~-----------~~ 263 (604)
T KOG0592|consen 200 LKPENILLDKDGHIKITDFGSAKILSPSQKSQE-----NPVDPNQASSRRSSFVGTAEYVSPELLND-----------SP 263 (604)
T ss_pred CChhheeEcCCCcEEEeeccccccCChhhcccc-----CccCcccccCcccceeeeecccCHHHhcC-----------CC
Confidence 999999999999999999999999987654311 000111100 011223444555543211 23
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
.+.+-|-|.||||+.+++.. ..||+--.++ ++++.++-+ +|.+ | .+.++.++++++
T Consensus 264 ~~~~sDiWAlGCilyQmlaG--~PPFra~Ney-liFqkI~~l---------~y~f-----p-------~~fp~~a~dLv~ 319 (604)
T KOG0592|consen 264 AGPSSDLWALGCILYQMLAG--QPPFRAANEY-LIFQKIQAL---------DYEF-----P-------EGFPEDARDLIK 319 (604)
T ss_pred CCcccchHHHHHHHHHHhcC--CCCCccccHH-HHHHHHHHh---------cccC-----C-------CCCCHHHHHHHH
Confidence 34556677777777666652 1222222223 233332211 2222 1 366789999999
Q ss_pred HhhhccccCCCCHHHHHhhhhHH
Q 005274 504 ALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
++|..||.-|++.-+--.|..|.
T Consensus 320 KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 320 KLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred HHHccCccccccHHHHhhCcccc
Confidence 99999999999997777787763
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.87 E-value=9e-22 Score=215.59 Aligned_cols=231 Identities=21% Similarity=0.283 Sum_probs=161.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.||||.||||+-|.|++.||+|++.+.-+. + .-.+.+.+|++++++
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~--~----------------------------k~l~~l~~ev~i~r~ 57 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN--E----------------------------KELKNLRQEVRILRS 57 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCc--h----------------------------HHHHHHHHHHHHHHh
Confidence 4699999999999999999999999997542111 1 112567789999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--h-------hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--Y-------LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~-------l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| .++.+.+. .+|.++..++|.||+.| +|..+... . -+..++..+|.+||+.+|.|||
T Consensus 58 lkH-pniv~m~e----------sfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd 125 (808)
T KOG0597|consen 58 LKH-PNIVEMLE----------SFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRD 125 (808)
T ss_pred cCC-cchhhHHH----------hhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 987 34444443 33457788999999999 88776432 2 2335667889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhH------HHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEEL------REGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~------r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+||.|||+...|.+|+||||+++..+... +.+-..+.+.++.+..+....|+|++||+
T Consensus 126 ~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGci---------------- 189 (808)
T KOG0597|consen 126 MKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCI---------------- 189 (808)
T ss_pred CCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHH----------------
Confidence 99999999999999999999998776542 22223345556666666666777777764
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
+.++. ..-||+++.-+-.+. +-| .. ||- .+| ...|+..+
T Consensus 190 -----------------lYE~~-------~G~PPF~a~si~~Lv--~~I-~~-d~v------~~p-------~~~S~~f~ 228 (808)
T KOG0597|consen 190 -----------------LYELY-------VGQPPFYARSITQLV--KSI-LK-DPV------KPP-------STASSSFV 228 (808)
T ss_pred -----------------HHHHh-------cCCCCchHHHHHHHH--HHH-hc-CCC------CCc-------ccccHHHH
Confidence 22222 356777764443332 111 11 211 112 26788999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhh
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
.+|+.+|.|||..|++.-.-|-|..
T Consensus 229 nfl~gLL~kdP~~RltW~~Ll~HpF 253 (808)
T KOG0597|consen 229 NFLQGLLIKDPAQRLTWTDLLGHPF 253 (808)
T ss_pred HHHHHHhhcChhhcccHHHHhcChH
Confidence 9999999999999977666566654
No 25
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.4e-21 Score=212.50 Aligned_cols=238 Identities=21% Similarity=0.268 Sum_probs=157.3
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|+||.|+.|+...+|+.||||+....... . .. ....+.+.+|+..++
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~---~-----------------------~~-~~~~~~i~rEi~~~~ 74 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS---S-----------------------KS-QKLDELIKREISILR 74 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhccc---c-----------------------cc-cccchhhHHHHHHHH
Confidence 36899999999999999999999999987642000 0 00 012234446665555
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hh-------HHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YL-------IEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l-------~e~~v~~~L~qLh~~G~~H~ 344 (704)
..+ ++|+|.-..-+.+..+..++||||+.|+.|.+.... ++ .-.++.+++.++|+.|++||
T Consensus 75 ~~~----------~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 75 RLR----------SHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred Hhc----------cCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 444 235666666667778889999999999998887532 22 22677888999999999999
Q ss_pred CCCCCcEEEecC-CcEEEEecCCccccC-h-hHHHHHHH----HHHHhhcc-C-hhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 345 DPHPGNLFRSYD-GKLAYIDFGMMGEFK-E-ELREGFIE----ACLHLVNR-D-FDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 345 DphPgNILv~~d-G~l~liDFGl~~~l~-~-~~r~~~~~----~~~~l~~~-d-~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
|+||+|||++.+ +.+|++|||++.... + ..-...++ +.+.++.+ . |.+.+.|+|++|++
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GVi------------ 212 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVI------------ 212 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHH------------
Confidence 999999999999 999999999998773 2 22222222 33444433 4 66677777777764
Q ss_pred HHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCC-
Q 005274 416 LTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDS- 494 (704)
Q Consensus 416 L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~- 494 (704)
+..|.. -.+||.-+ ....+.+.+ ..-.|.+ | ...
T Consensus 213 ---------------------Ly~ml~--G~~PF~d~-~~~~l~~ki---------~~~~~~~-----p-------~~~~ 247 (370)
T KOG0583|consen 213 ---------------------LYVLLC--GRLPFDDS-NVPNLYRKI---------RKGEFKI-----P-------SYLL 247 (370)
T ss_pred ---------------------HHHHHh--CCCCCCCc-cHHHHHHHH---------hcCCccC-----C-------CCcC
Confidence 111111 11222211 111111110 0012222 1 122
Q ss_pred ChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 495 SPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 495 sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
|+++++++++||..||..|++-.+-+.|+-+
T Consensus 248 S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~ 278 (370)
T KOG0583|consen 248 SPEARSLIEKMLVPDPSTRITLLEILEHPWF 278 (370)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHhhChhh
Confidence 9999999999999999999999999988877
No 26
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.86 E-value=2.8e-22 Score=193.22 Aligned_cols=263 Identities=21% Similarity=0.226 Sum_probs=169.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|.+|.|++|+.+.|++.||+|..|-+-. -+....+..+|+.+++|
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddd------------------------------degvpssalreicllke 57 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDD------------------------------DEGVPSSALREICLLKE 57 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCC------------------------------CCCCcHHHHHHHHHHHH
Confidence 569999999999999999999999998873311 12345677899999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---h-------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---L-------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---~-------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| .++.+++ -......+..||+|||+. +|..+.+ . +-...++..++...|++++.||
T Consensus 58 lkh-knivrl~----------dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhr 125 (292)
T KOG0662|consen 58 LKH-KNIVRLH----------DVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHR 125 (292)
T ss_pred hhh-cceeehh----------hhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhc
Confidence 987 2222221 122234567799999964 4444321 1 1122456667778899999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||.|++++.+|.+++.|||+++.+.-..|..- ..++++-+-+|++--.. +.|
T Consensus 126 dlkpqnllin~ngelkladfglarafgipvrcys----------------aevvtlwyrppdvlfga----------kly 179 (292)
T KOG0662|consen 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYS----------------AEVVTLWYRPPDVLFGA----------KLY 179 (292)
T ss_pred cCCcceEEeccCCcEEecccchhhhcCCceEeee----------------ceeeeeeccCcceeeee----------ehh
Confidence 9999999999999999999999987765443221 11222333333322110 123
Q ss_pred hccCCccCHHhHHHHHHHHHhh-cC-CCCChhHHHHHHHHHhh---hhhhhhcCCCCccccccchh-HHhhhccCCChHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYK-FK-FRIPSYFSLVIRSLAVL---EGIAISSNPNYKVLGSTYPY-IARKVLTDSSPQL 498 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~-~~-~~iP~~~~liiRsl~~l---EGi~~~ldP~~~i~~~a~P~-i~r~ll~d~sp~l 498 (704)
+.+++.||.|+|+.++.+.-+. +| -.+...+..|+|.+++. .+...+--|+|+..+...+- -...+.+..+...
T Consensus 180 ~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~g 259 (292)
T KOG0662|consen 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTG 259 (292)
T ss_pred ccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchh
Confidence 3344455555555554432211 11 11223555666666553 22334445666654332221 1345666778889
Q ss_pred HHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 499 KSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
||+|+++|..+|..|+++-++|-|.+|
T Consensus 260 rdllqkll~cnp~qrisaeaalqhpyf 286 (292)
T KOG0662|consen 260 RDLLQKLLKCNPAQRISAEAALQHPYF 286 (292)
T ss_pred HHHHHHHhccCcccccCHHHHhcCccc
Confidence 999999999999999999999999997
No 27
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=4.9e-21 Score=211.30 Aligned_cols=243 Identities=22% Similarity=0.260 Sum_probs=175.7
Q ss_pred CChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHH
Q 005274 183 LPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWA 262 (704)
Q Consensus 183 ~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~ 262 (704)
.++...|..+ +.||+|+-|.||.|+...+++.||||.+.-. .+- -.
T Consensus 269 ~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~--~Q~------------------------------~k 314 (550)
T KOG0578|consen 269 GDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLR--KQP------------------------------KK 314 (550)
T ss_pred CChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEEec--cCC------------------------------ch
Confidence 3455566666 5599999999999999999999999987421 110 12
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-hh-------HHHHHHHHHH
Q 005274 263 SSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-YL-------IEVGVYCSFN 334 (704)
Q Consensus 263 ~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~l-------~e~~v~~~L~ 334 (704)
+-++.|+..+++.+| .++..++..+. ..+..|.||||++|+.|+|+... .+ +-..++.+|.
T Consensus 315 eLilnEi~Vm~~~~H-~NiVnfl~Syl----------v~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~ 383 (550)
T KOG0578|consen 315 ELLLNEILVMRDLHH-PNIVNFLDSYL----------VGDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLK 383 (550)
T ss_pred hhhHHHHHHHHhccc-hHHHHHHHHhc----------ccceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHH
Confidence 457889999999887 45555544321 13788999999999999998542 12 2245667899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhH--HHHHHH----HHHHhhccChhHHHHHHHhcCCCCCccc
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL--REGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTAE 408 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~--r~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~d 408 (704)
+||..||+|||+|..|||++.+|.+|+.|||++.+++++. |.++.+ +.+.++.+..|+...|+|+||++
T Consensus 384 fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIM----- 458 (550)
T KOG0578|consen 384 FLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIM----- 458 (550)
T ss_pred HHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhH-----
Confidence 9999999999999999999999999999999999998764 444433 34456666666667777777764
Q ss_pred hHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhH-HHHHHHHHhhhhhhhhcCCCCccccccchhHH
Q 005274 409 KEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYF-SLVIRSLAVLEGIAISSNPNYKVLGSTYPYIA 487 (704)
Q Consensus 409 ~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~-~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~ 487 (704)
.-+|.+ +-|||| ..-+|++- -|+...-|.++..
T Consensus 459 ----------------------------aIEMve-------GEPPYlnE~PlrAly---LIa~ng~P~lk~~-------- 492 (550)
T KOG0578|consen 459 ----------------------------AIEMVE-------GEPPYLNENPLRALY---LIATNGTPKLKNP-------- 492 (550)
T ss_pred ----------------------------HHHHhc-------CCCCccCCChHHHHH---HHhhcCCCCcCCc--------
Confidence 222222 345555 33344432 2233344554432
Q ss_pred hhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 488 RKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 488 r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...||++++.|.++|+.|+..|+++.|-|-|+.+
T Consensus 493 ----~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 493 ----EKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred ----cccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 3579999999999999999999999998888876
No 28
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.85 E-value=3.3e-21 Score=215.92 Aligned_cols=171 Identities=18% Similarity=0.179 Sum_probs=122.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|+||||-||.++.||+.||||+++..- .+..+-..|+.++.
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---------------------------------~f~~Q~~~Ei~iL~ 237 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---------------------------------RFLRQAQIEIRILE 237 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccCh---------------------------------HHHHHHHHHHHHHH
Confidence 368999999999999999999999999998532 22334445555555
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
..+.. --.+.-+++--.-|..+-+..+||.|.. +..|.++.+. +-...++..+|..||+.||+
T Consensus 238 ~ln~~-----d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~II 311 (586)
T KOG0667|consen 238 LLNKH-----DPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGII 311 (586)
T ss_pred HHhcc-----CCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 44410 0112224444455667788899999999 6688887542 22346788899999999999
Q ss_pred ccCCCCCcEEEecC--CcEEEEecCCccccChhHHHHHHH----HHHHhhccChhHHHHHHHhcCCCC
Q 005274 343 HADPHPGNLFRSYD--GKLAYIDFGMMGEFKEELREGFIE----ACLHLVNRDFDALAKDFVTLGLLP 404 (704)
Q Consensus 343 H~DphPgNILv~~d--G~l~liDFGl~~~l~~~~r~~~~~----~~~~l~~~d~~~la~d~~slG~l~ 404 (704)
||||||+|||+..- .+||++|||.++..++..- .++. -.++++-+-.+..+.|||++||+.
T Consensus 312 HcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIl 378 (586)
T KOG0667|consen 312 HCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCIL 378 (586)
T ss_pred eccCChhheeeccCCcCceeEEecccccccCCcce-eeeeccccccchhhccCCCCCccceeehhhhH
Confidence 99999999998643 4799999999998776543 2222 234466666677788899999873
No 29
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=1.4e-21 Score=217.80 Aligned_cols=234 Identities=20% Similarity=0.211 Sum_probs=169.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.||-|.|..|++..||+.+|||++..... +-+.....+.+||-+++=
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~-----------------------------~s~s~~~~IerEIviMkL 68 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSE-----------------------------LSSSQPAGIEREIVIMKL 68 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccc-----------------------------cccccccchhhhhHHHHH
Confidence 579999999999999999999999999853210 011122345566666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hhHH-------HHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YLIE-------VGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l~e-------~~v~~~L~qLh~~G~~H~D 345 (704)
..| ++|..-.-.|+-....|||.||++||.|.++.-. .+.+ .++.+++.++|..+|+|||
T Consensus 69 i~H-----------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRD 137 (786)
T KOG0588|consen 69 IEH-----------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRD 137 (786)
T ss_pred hcC-----------CCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceecc
Confidence 554 5666666677888899999999999999997432 2222 5778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccc-cChhHHHHHHH----HHHHh-hccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGE-FKEELREGFIE----ACLHL-VNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~-l~~~~r~~~~~----~~~~l-~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+||+|+|++..++|||.||||+.- .+...-++.|+ +++++ ..+.|++.+.|+|++|++. -.+
T Consensus 138 LKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVIL------------fAL 205 (786)
T KOG0588|consen 138 LKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVIL------------FAL 205 (786)
T ss_pred CCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHH------------HHH
Confidence 999999999999999999999874 34444455554 45554 4567899999999999861 112
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
+.+ ..++++.|+..++.++ .+..|.+| ...+++++
T Consensus 206 LtG--~LPFdDdNir~LLlKV----~~G~f~MP---------------------------------------s~Is~eaQ 240 (786)
T KOG0588|consen 206 LTG--KLPFDDDNIRVLLLKV----QRGVFEMP---------------------------------------SNISSEAQ 240 (786)
T ss_pred HhC--CCCCCCccHHHHHHHH----HcCcccCC---------------------------------------CcCCHHHH
Confidence 221 1256666655544333 23333333 24588999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++|++||..||..|++--+-+-|+.+
T Consensus 241 dLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 241 DLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred HHHHHHhccCccccccHHHHhhCchh
Confidence 99999999999999998887878754
No 30
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=6e-21 Score=214.21 Aligned_cols=231 Identities=21% Similarity=0.189 Sum_probs=157.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..+|.||||.|+.|.++.+++.+|||+++++.- +..| -.++++.|-.++
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I--l~~d---------------------------~Ve~~~~EkrI~-- 422 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI--LQRD---------------------------EVESLMCEKRIF-- 422 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccce--eccc---------------------------cHHHHHHHHHHH--
Confidence 579999999999999999999999999987631 1111 112333342222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh--------hhhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD--------LYLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~--------~~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+...+|.+.-....++..++.+.||||+.|+++..... ..++...+.++|++||++||++||+
T Consensus 423 --------~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDl 494 (694)
T KOG0694|consen 423 --------ELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDL 494 (694)
T ss_pred --------HHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeec
Confidence 222245666666667778889999999999999765532 3566788899999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccC-hhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFK-EELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~-~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
|-+|||++.+|.++|+||||+++-- ... ....-..+..|+.|++-.+ ..|+
T Consensus 495 KLdNiLLD~eGh~kiADFGlcKe~m~~g~-----------------~TsTfCGTpey~aPEil~e-----------~~Yt 546 (694)
T KOG0694|consen 495 KLDNLLLDTEGHVKIADFGLCKEGMGQGD-----------------RTSTFCGTPEFLAPEVLTE-----------QSYT 546 (694)
T ss_pred chhheEEcccCcEEecccccccccCCCCC-----------------ccccccCChhhcChhhhcc-----------Cccc
Confidence 9999999999999999999999742 111 1122223445565554322 4567
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
..+|+|++|.++.+|+..-..|+-.-.. .++-++. .-|| .|| ...|.++.++|++|
T Consensus 547 ~aVDWW~lGVLlyeML~Gq~PF~gddEe---e~FdsI~-------~d~~-------~yP-------~~ls~ea~~il~~l 602 (694)
T KOG0694|consen 547 RAVDWWGLGVLLYEMLVGESPFPGDDEE---EVFDSIV-------NDEV-------RYP-------RFLSKEAIAIMRRL 602 (694)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHh-------cCCC-------CCC-------CcccHHHHHHHHHH
Confidence 7778888777776665432222211111 2222322 1122 244 35788999999999
Q ss_pred hhccccCCCCH
Q 005274 506 LYKEGVFRIDR 516 (704)
Q Consensus 506 L~~d~~~R~~r 516 (704)
|.+||..|...
T Consensus 603 l~k~p~kRLG~ 613 (694)
T KOG0694|consen 603 LRKNPEKRLGS 613 (694)
T ss_pred hccCcccccCC
Confidence 99999999865
No 31
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.84 E-value=1.7e-20 Score=201.17 Aligned_cols=239 Identities=18% Similarity=0.199 Sum_probs=148.2
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+.+.+|+.||||+.++.... ..+......+|+..++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~l 52 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVII-----------------------------AKDEVAHTLTESRVLQNT 52 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhHHHHHHHHHHHHHHhC
Confidence 589999999999999999999999998742100 001112233444444433
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
+| +++.-...+.+.....++||||++|+.|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ~h-----------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl 121 (323)
T cd05571 53 RH-----------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121 (323)
T ss_pred CC-----------CCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 33 4443333344556778999999999999776421 122357788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.||+++.+|.++++|||+++........ ......+.++++||.-. ...++.
T Consensus 122 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 174 (323)
T cd05571 122 KLENLMLDKDGHIKITDFGLCKEGISDGAT----------------MKTFCGTPEYLAPEVLE-----------DNDYGR 174 (323)
T ss_pred CHHHEEECCCCCEEEeeCCCCcccccCCCc----------------ccceecCccccChhhhc-----------CCCCCc
Confidence 999999999999999999998753211100 00011233444444211 112334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-. ....+...+. .-++.+ | ...++++++++++||
T Consensus 175 ~~DiwSlG~il~elltg--~~Pf~~~-~~~~~~~~~~-------~~~~~~-------p-------~~~~~~~~~li~~~L 230 (323)
T cd05571 175 AVDWWGLGVVMYEMMCG--RLPFYNQ-DHEKLFELIL-------MEEIRF-------P-------RTLSPEAKSLLAGLL 230 (323)
T ss_pred cccCcccchhhhhhhcC--CCCCCCC-CHHHHHHHHH-------cCCCCC-------C-------CCCCHHHHHHHHHHc
Confidence 45667777666665431 1222111 1111111111 001111 1 356889999999999
Q ss_pred hccccCCC-----CHHHHHhhhhH
Q 005274 507 YKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~-----~rle~Ll~~~~ 525 (704)
.+||..|+ ++.+.+.|+.+
T Consensus 231 ~~dP~~R~~~~~~~~~~ll~h~~f 254 (323)
T cd05571 231 KKDPKQRLGGGPEDAKEIMEHRFF 254 (323)
T ss_pred cCCHHHcCCCCCCCHHHHHcCCCc
Confidence 99999999 67777777765
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=3.9e-21 Score=206.48 Aligned_cols=243 Identities=23% Similarity=0.328 Sum_probs=174.5
Q ss_pred CChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHH
Q 005274 183 LPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWA 262 (704)
Q Consensus 183 ~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~ 262 (704)
.+++..|..+ +-||.||||.||||.+..|++.||+|++.-. ..-++ .
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le------------------------------~~~de-I 55 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE------------------------------EAEDE-I 55 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechh------------------------------hcchh-h
Confidence 4566777777 5699999999999999999999999998621 11111 2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHH
Q 005274 263 SSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSF 333 (704)
Q Consensus 263 ~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L 333 (704)
..+.+|+.++.+.+. ..+.++|+..- ..+..+++||||.|+.+.+.... .++-..+..++
T Consensus 56 ediqqei~~Ls~~~~-~~it~yygsyl----------~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l 124 (467)
T KOG0201|consen 56 EDIQQEISVLSQCDS-PNITEYYGSYL----------KGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGL 124 (467)
T ss_pred HHHHHHHHHHHhcCc-chHHhhhhhee----------ecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHh
Confidence 345678888888877 66666665322 15778999999999999887542 12335677889
Q ss_pred HHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHH--HHHHH----HHHHhhccChhHHHHHHHhcCCCCCcc
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELR--EGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTA 407 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r--~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~ 407 (704)
.++|.++.+|+|+|+.||++..+|.++++|||.+.+++.... .+|.+ +.+.++....|....|+|+||+..-+
T Consensus 125 ~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiE- 203 (467)
T KOG0201|consen 125 DYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIE- 203 (467)
T ss_pred hhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHH-
Confidence 999999999999999999999999999999999999876643 34433 55668888888899999999974211
Q ss_pred chHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHH
Q 005274 408 EKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIA 487 (704)
Q Consensus 408 d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~ 487 (704)
+..|-..++ ++ +| .|. -|-|-+...|-+
T Consensus 204 ----------------la~GePP~s--~~----------hP----------mrv-------------lflIpk~~PP~L- 231 (467)
T KOG0201|consen 204 ----------------LAKGEPPHS--KL----------HP----------MRV-------------LFLIPKSAPPRL- 231 (467)
T ss_pred ----------------HhcCCCCCc--cc----------Cc----------ceE-------------EEeccCCCCCcc-
Confidence 111111111 00 00 000 011222333422
Q ss_pred hhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 488 RKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 488 r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
-.+.||.+++.+...|.+||++|+++.+.|-|+..
T Consensus 232 ---~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FI 266 (467)
T KOG0201|consen 232 ---DGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFI 266 (467)
T ss_pred ---ccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHH
Confidence 12678999999999999999999999999989876
No 33
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.83 E-value=7.4e-20 Score=192.51 Aligned_cols=260 Identities=15% Similarity=0.152 Sum_probs=148.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.+..... .....+.+|+..++.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-------------------------------GAPCTAIREVSLLKN 59 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccC-------------------------------CcchhHHHHHHHHHh
Confidence 5799999999999999989999999997632111 001123345544444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| ++|.-..-+.......++||||++| .|.+.... ...-.++..++.+||+.|++|+
T Consensus 60 l~h-----------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 127 (288)
T cd07871 60 LKH-----------ANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHR 127 (288)
T ss_pred CCC-----------CCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 433 4444333334445567899999987 66654321 1122577889999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHH------HHHHHHHHhhc-cChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE------GFIEACLHLVN-RDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~------~~~~~~~~l~~-~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
|+||+|||++.+|.++++|||++......... ......+.++. ...+....|+|++|++. .
T Consensus 128 dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l------------~ 195 (288)
T cd07871 128 DLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIL------------Y 195 (288)
T ss_pred CCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHH------------H
Confidence 99999999999999999999998754322110 11112233332 23344566777777641 1
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.++.+. .++...+..+.+..+... .+...+..+. .+...+.......|.++ ..|+. ......+++
T Consensus 196 ~l~~g~--~pf~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~ 260 (288)
T cd07871 196 EMATGR--PMFPGSTVKEELHLIFRL---LGTPTEETWP----GITSNEEFRSYLFPQYR----AQPLI--NHAPRLDTD 260 (288)
T ss_pred HHHhCC--CCCCCCCHHHHHHHHHHH---hCCCChHHhh----ccccchhhhccccCccC----CCchH--HhCCCCCHH
Confidence 111110 111122222221111111 1111111110 00001111111122221 11221 234567899
Q ss_pred HHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 498 LKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
++++|+.||.+||..|+++-+.|-|+.
T Consensus 261 ~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 261 GIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 999999999999999999999988864
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.83 E-value=4.8e-20 Score=198.10 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=150.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|+.||||+.++..... ......+..|++.+..
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~ 57 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK-----------------------------LNEVRHVLTERDILTT 57 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----------------------------hhHHHHHHHHHHHHHh
Confidence 57999999999999999899999999986421100 0111234445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-...+.+.....++||||++|++|.++... ...-.++..++.+||+.|++|+|
T Consensus 58 ~~h-----------~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 126 (333)
T cd05600 58 TKS-----------EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126 (333)
T ss_pred CCC-----------CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 333 3333222344456678999999999999887532 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||.||+++.+|.++++|||++........ ....+.++++|+.-. ...++
T Consensus 127 lkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~-------------------~~~gt~~y~aPE~~~-----------~~~~~ 176 (333)
T cd05600 127 LKPENFLIDASGHIKLTDFGLSKGIVTYAN-------------------SVVGSPDYMAPEVLR-----------GKGYD 176 (333)
T ss_pred CCHHHEEECCCCCEEEEeCcCCcccccccC-------------------CcccCccccChhHhc-----------CCCCC
Confidence 999999999999999999999876543100 001123444444211 11233
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++.... .|+... ........+.... .....|... .| ....++++.+++.+|
T Consensus 177 ~~~DvwslG~il~ell~g~--~pf~~~-~~~~~~~~i~~~~--~~~~~~~~~-----~~------~~~~s~~~~~li~~~ 240 (333)
T cd05600 177 FTVDYWSLGCMLYEFLCGF--PPFSGS-TPNETWENLKYWK--ETLQRPVYD-----DP------RFNLSDEAWDLITKL 240 (333)
T ss_pred CccceecchHHHhhhhhCC--CCCCCC-CHHHHHHHHHhcc--ccccCCCCC-----cc------ccccCHHHHHHHHHH
Confidence 4456677777766665422 222111 0111111111000 000011110 00 034688999999999
Q ss_pred hhccccCCCCHHHHHhhhhH
Q 005274 506 LYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 506 L~~d~~~R~~rle~Ll~~~~ 525 (704)
|..+|..|.+.-+.+.|+.+
T Consensus 241 l~~~~~rr~s~~~ll~h~~~ 260 (333)
T cd05600 241 INDPSRRFGSLEDIKNHPFF 260 (333)
T ss_pred hhChhhhcCCHHHHHhCccc
Confidence 99889999998888878765
No 35
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.83 E-value=6.6e-20 Score=198.93 Aligned_cols=245 Identities=16% Similarity=0.236 Sum_probs=155.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+++.+|+.||||+...+... .....+.+|+..++.
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 128 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHED-------------------------------TVRRQICREIEILRD 128 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcH-------------------------------HHHHHHHHHHHHHHh
Confidence 4699999999999999989999999998643211 222345566666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-----hhhHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-----LYLIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-----~~l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
.+| ++|.-..-+.+..+..+++|||++|+.|.+... ...+-.++..++.+||+.|++|+|+||.
T Consensus 129 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~ 197 (353)
T PLN00034 129 VNH-----------PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPS 197 (353)
T ss_pred CCC-----------CCcceeeeEeccCCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence 444 333332334455677889999999998865421 1123367788999999999999999999
Q ss_pred cEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCC
Q 005274 350 NLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVR 429 (704)
Q Consensus 350 NILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~ 429 (704)
|||++.+|.++|+|||++..+...... ......+.+|++||.-..... ...+.+...|
T Consensus 198 NIll~~~~~~kL~DfG~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~D 255 (353)
T PLN00034 198 NLLINSAKNVKIADFGVSRILAQTMDP----------------CNSSVGTIAYMSPERINTDLN------HGAYDGYAGD 255 (353)
T ss_pred HEEEcCCCCEEEcccccceeccccccc----------------ccccccCccccCccccccccc------cCcCCCcchh
Confidence 999999999999999998765432110 000112344555553211000 0011122456
Q ss_pred ccCHHhHHHHHHHHHhhcCCCC--ChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhh
Q 005274 430 NISFGDLLGNLGATMYKFKFRI--PSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLY 507 (704)
Q Consensus 430 ~~s~~~i~~~L~~~~~~~~~~i--P~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~ 507 (704)
.|++|.++.++... +.+|.. ...+..+.... .....+. .....++++++++.++|.
T Consensus 256 vwslGvil~el~~g--~~pf~~~~~~~~~~~~~~~------~~~~~~~--------------~~~~~~~~l~~li~~~l~ 313 (353)
T PLN00034 256 IWSLGVSILEFYLG--RFPFGVGRQGDWASLMCAI------CMSQPPE--------------APATASREFRHFISCCLQ 313 (353)
T ss_pred HHHHHHHHHHHHhC--CCCCCCCCCccHHHHHHHH------hccCCCC--------------CCCccCHHHHHHHHHHcc
Confidence 67777777665532 233321 12222222111 1111111 113567899999999999
Q ss_pred ccccCCCCHHHHHhhhhH
Q 005274 508 KEGVFRIDRLESLLTESL 525 (704)
Q Consensus 508 ~d~~~R~~rle~Ll~~~~ 525 (704)
.||..|++..|.|.|..+
T Consensus 314 ~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 314 REPAKRWSAMQLLQHPFI 331 (353)
T ss_pred CChhhCcCHHHHhcCccc
Confidence 999999999999999876
No 36
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.3e-20 Score=188.73 Aligned_cols=259 Identities=18% Similarity=0.222 Sum_probs=185.6
Q ss_pred hhhcccC-CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHH
Q 005274 187 ELFSEIS-PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSL 265 (704)
Q Consensus 187 eiF~~~~-~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l 265 (704)
+.|+..+ .+.+|.|..+.|.++..+.||.+.|+|++.-..... ..+-..++.+..
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~------------------------~~e~~~~~~EaT 69 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE------------------------SGETPYEMREAT 69 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc------------------------CCccHHHHHHHH
Confidence 4455554 357899999999999999999999999975321110 011144556667
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHH
Q 005274 266 FRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQL 336 (704)
Q Consensus 266 ~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qL 336 (704)
.+|+++++... ++|++.--.-.++..+-.++|+|.++-+.|.|+... +-+..++..++.+|
T Consensus 70 ~~Ev~ILRqv~----------GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeyl 139 (411)
T KOG0599|consen 70 RQEISILRQVM----------GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYL 139 (411)
T ss_pred HHHHHHHHHhc----------CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHH
Confidence 77777766543 346665555566677778899999999999998532 22335667788899
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|..+|+|||+||+|||.+++-++++.|||.++++.+..+ +.+...+.|++.|++-..++...
T Consensus 140 Ha~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek-----------------LrelCGTPgYLAPEtikC~m~e~- 201 (411)
T KOG0599|consen 140 HARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK-----------------LRELCGTPGYLAPETIKCSMYEN- 201 (411)
T ss_pred HHhhhhhcccChhheeeccccceEEeccceeeccCCchh-----------------HHHhcCCCcccChhheeeecccC-
Confidence 999999999999999999999999999999999887543 33445568888887644322110
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHH----HHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFS----LVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~----liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
...|++.+|.|..|.|+..|+. .-||++- +++|.+ +||--.--+|++ .
T Consensus 202 ----~pGYs~EVD~Wa~GVImyTLLa-------GcpPFwHRkQmlMLR~I--meGkyqF~speW---------------a 253 (411)
T KOG0599|consen 202 ----HPGYSKEVDEWACGVIMYTLLA-------GCPPFWHRKQMLMLRMI--MEGKYQFRSPEW---------------A 253 (411)
T ss_pred ----CCCccchhhHHHHHHHHHHHHc-------CCCchhHHHHHHHHHHH--HhcccccCCcch---------------h
Confidence 0235677888988777666554 6777763 233332 355332223322 2
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
|.|.+.++++.++|+.||..|+++.|+|.|+.+
T Consensus 254 dis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 254 DISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred hccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 788999999999999999999999999999876
No 37
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.82 E-value=6e-20 Score=201.86 Aligned_cols=242 Identities=21% Similarity=0.230 Sum_probs=164.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|.||+||+|+.+.||+.+|+|++.+..... ++....+.+|+.+++.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~-----------------------------~~~~~~v~~Ev~il~~ 91 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG-----------------------------KEDREDVRREVAILQQ 91 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccc-----------------------------cccHHHHHHHHHHHHh
Confidence 57999999999999999999999999986432110 0012345566666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-hH-------HHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-LI-------EVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-l~-------e~~v~~~L~qLh~~G~~H~Dp 346 (704)
... +++++--.-..+.....++|||+|+|+.|.+..... +. ..++..+++++|+.|++|||+
T Consensus 92 l~~----------hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDl 161 (382)
T KOG0032|consen 92 LSG----------HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDL 161 (382)
T ss_pred ccC----------CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence 542 366555555566777889999999999998865432 22 256777899999999999999
Q ss_pred CCCcEEEec----CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 347 HPGNLFRSY----DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 347 hPgNILv~~----dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
||+|+|+.. ++.++++|||++.......+ +...+.+.++++|++... .
T Consensus 162 KpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~-----------------~~~~~Gtp~y~APEvl~~-----------~ 213 (382)
T KOG0032|consen 162 KPENLLLASKDEGSGRIKLIDFGLAKFIKPGER-----------------LHTIVGTPEYVAPEVLGG-----------R 213 (382)
T ss_pred CHHHeeeccccCCCCcEEEeeCCCceEccCCce-----------------EeeecCCccccCchhhcC-----------C
Confidence 999999853 35899999999998765211 122234456666654321 3
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHH--HHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLV--IRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKS 500 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~li--iRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~ 500 (704)
.++..++.|+.|.++.-|+. ..||+...- .....+ ... ++++-.... .+.|..+++
T Consensus 214 ~y~~~~DiWS~Gvi~yiLL~-------G~~PF~~~~~~~~~~~i-----~~~--~~~f~~~~w--------~~is~~akd 271 (382)
T KOG0032|consen 214 PYGDEVDVWSIGVILYILLS-------GVPPFWGETEFEIFLAI-----LRG--DFDFTSEPW--------DDISESAKD 271 (382)
T ss_pred CCCcccchhHHHHHHHHHhh-------CCCCCcCCChhHHHHHH-----HcC--CCCCCCCCc--------cccCHHHHH
Confidence 45666777877777666543 334433111 000111 112 333322222 367999999
Q ss_pred HHHHhhhccccCCCCHHHHHhhhhH
Q 005274 501 SLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 501 lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++.+|.+||..|.++-++|-|+-+
T Consensus 272 ~i~~ll~~dp~~R~ta~~~L~HpWi 296 (382)
T KOG0032|consen 272 FIRKLLEFDPRKRLTAAQALQHPWI 296 (382)
T ss_pred HHHHhcccCcccCCCHHHHhcCccc
Confidence 9999999999999999999999754
No 38
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.82 E-value=1e-19 Score=195.07 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=96.0
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||+||+|+.+.+|+.||||+.++..... .........|+..++..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~~ 52 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-----------------------------KDEVAHTLTENRVLQNS 52 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----------------------------hhHHHHHHHHHHHHHhC
Confidence 5899999999999999899999999986421100 00011222333333222
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCccccC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHAD 345 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~D 345 (704)
+ ++++.....+.......++||||++|++|.+.... ...-.++..++.+||+ .|++|+|
T Consensus 53 ~-----------hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrD 121 (325)
T cd05594 53 R-----------HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 121 (325)
T ss_pred C-----------CCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecC
Confidence 2 24443333344556778999999999998765421 1223577888999997 7999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||.|||++.+|.++++|||++...
T Consensus 122 ikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 122 LKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCeEEECCCCCEEEecCCCCeec
Confidence 9999999999999999999998753
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.82 E-value=1.8e-19 Score=189.35 Aligned_cols=243 Identities=14% Similarity=0.118 Sum_probs=148.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|..+.+|+.||||+..+..... ......+.+|++.+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~~~~~~E~~il~~ 56 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----------------------------RKGEAMALNEKRILEK 56 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-----------------------------hhhHHHHHHHHHHHHh
Confidence 56999999999999999899999999876431110 0001123345444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
..| +++.....+.......+++|||++|++|.+.... .....++..++.+||+.|++|
T Consensus 57 l~~-----------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05631 57 VNS-----------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVY 125 (285)
T ss_pred cCC-----------CcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 333 3333322233445678899999999999765321 112357788899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||.||+++.++.++++|||++..+...... .....+.++++|+.-. ...
T Consensus 126 ~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-----------------~~~~g~~~y~aPE~~~-----------~~~ 177 (285)
T cd05631 126 RDLKPENILLDDRGHIRISDLGLAVQIPEGETV-----------------RGRVGTVGYMAPEVIN-----------NEK 177 (285)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee-----------------cCCCCCCCccCHhhhc-----------CCC
Confidence 999999999999999999999998765432110 0011234455554221 112
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
++...|.|++|.++.++... +.+|.-....... ..+ ...+ ..+... .....++++.++++
T Consensus 178 ~~~~~DvwslGvil~el~~g--~~pf~~~~~~~~~-~~~--~~~~---~~~~~~------------~~~~~s~~~~~li~ 237 (285)
T cd05631 178 YTFSPDWWGLGCLIYEMIQG--QSPFRKRKERVKR-EEV--DRRV---KEDQEE------------YSEKFSEDAKSICR 237 (285)
T ss_pred CCcccCchhHHHHHHHHHhC--CCCCCCCCcchhH-HHH--HHHh---hccccc------------CCccCCHHHHHHHH
Confidence 33445778888777666542 2222211110000 000 0000 011100 12356889999999
Q ss_pred HhhhccccCCCC-----HHHHHhhhhH
Q 005274 504 ALLYKEGVFRID-----RLESLLTESL 525 (704)
Q Consensus 504 ~lL~~d~~~R~~-----rle~Ll~~~~ 525 (704)
+||.+||..|++ .-+.+-|+.+
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~ 264 (285)
T cd05631 238 MLLTKNPKERLGCRGNGAAGVKQHPIF 264 (285)
T ss_pred HHhhcCHHHhcCCCCCCHHHHhcCHhh
Confidence 999999999987 5666667665
No 40
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.82 E-value=9.6e-20 Score=190.45 Aligned_cols=137 Identities=20% Similarity=0.297 Sum_probs=100.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+..... ++....+.+|+..++.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 56 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN------------------------------EEVKETTLRELKMLRT 56 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccc------------------------------ccchhhHHHHHHHHHh
Confidence 5699999999999999989999999998643110 1122344566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.+.....++||||++|+.+..+... ...-.++..++.+||+.|++|+|
T Consensus 57 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 125 (287)
T cd07848 57 LKQ-----------ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD 125 (287)
T ss_pred CCC-----------ccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 554 2222222223345678999999999877655321 11235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+||+||+++.+|.++++|||++..+..
T Consensus 126 lkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 126 IKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred CCHHHEEEcCCCcEEEeeccCcccccc
Confidence 999999999999999999999987643
No 41
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.82 E-value=1.1e-19 Score=195.53 Aligned_cols=239 Identities=18% Similarity=0.188 Sum_probs=150.3
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||+||+|+.+.+|+.||||+.++.... ..+....+.+|+..++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~~~~~~~E~~~l~~l 52 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVII-----------------------------AKDEVAHTLTESRVLKNT 52 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhHHHHHHHHHHHHHhC
Confidence 589999999999999989999999998743110 001112333444444333
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
+| +++.-...+.......++||||++|+.|.+.... .....++..++.+||+.|++|+|+
T Consensus 53 ~h-----------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDi 121 (328)
T cd05593 53 RH-----------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDL 121 (328)
T ss_pred CC-----------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccc
Confidence 22 4433333344556678999999999999765421 123357788899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.|||++.+|.++++|||+++........ ......+.+|++||.-. ...++.
T Consensus 122 kp~NIll~~~~~~kL~DfG~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 174 (328)
T cd05593 122 KLENLMLDKDGHIKITDFGLCKEGITDAAT----------------MKTFCGTPEYLAPEVLE-----------DNDYGR 174 (328)
T ss_pred CHHHeEECCCCcEEEecCcCCccCCCcccc----------------cccccCCcCccChhhhc-----------CCCCCc
Confidence 999999999999999999998753221100 00011234555555311 122345
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..||.-. ....+.+.+. .. ++. +....++++++++++||
T Consensus 175 ~~DiwslGvil~elltG--~~Pf~~~-~~~~~~~~~~-------~~--~~~------------~p~~~~~~~~~li~~~L 230 (328)
T cd05593 175 AVDWWGLGVVMYEMMCG--RLPFYNQ-DHEKLFELIL-------ME--DIK------------FPRTLSADAKSLLSGLL 230 (328)
T ss_pred cCCccccchHHHHHhhC--CCCCCCC-CHHHHHHHhc-------cC--Ccc------------CCCCCCHHHHHHHHHHc
Confidence 56788888887777652 2222211 1111111110 00 111 11356889999999999
Q ss_pred hccccCCC-----CHHHHHhhhhH
Q 005274 507 YKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~-----~rle~Ll~~~~ 525 (704)
.+||..|+ +..+.+-|..+
T Consensus 231 ~~dP~~R~~~~~~~~~~il~h~~~ 254 (328)
T cd05593 231 IKDPNKRLGGGPDDAKEIMRHSFF 254 (328)
T ss_pred CCCHHHcCCCCCCCHHHHhcCCCc
Confidence 99999998 56666666554
No 42
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.81 E-value=7.3e-20 Score=193.74 Aligned_cols=134 Identities=21% Similarity=0.301 Sum_probs=95.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.+..... +......+|+..++.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-------------------------------GTPFTAIREASLLKG 59 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEecccccc-------------------------------ccchhHHHHHHHHhh
Confidence 6799999999999999989999999997632110 001123345555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++....-+.......++||||++|..+..+... ...-.++..++.+||+.|++|+|
T Consensus 60 l~h-----------~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 128 (303)
T cd07869 60 LKH-----------ANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD 128 (303)
T ss_pred CCC-----------CCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 433 4444333344556678999999976433322211 12235778899999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+||+++.+|.++++|||++...
T Consensus 129 lkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 129 LKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred CCHHHEEECCCCCEEECCCCcceec
Confidence 9999999999999999999998754
No 43
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.81 E-value=2e-19 Score=192.67 Aligned_cols=240 Identities=21% Similarity=0.177 Sum_probs=147.4
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||+||+|+.+.+|+.||||+.+++... . ++-......|...+...
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---~--------------------------~~~~~~~~~e~~~l~~~ 52 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL---Q--------------------------DDDVECTMTEKRILSLA 52 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh---h--------------------------ccHHHHHHHHHHHHHhc
Confidence 589999999999999989999999998743110 0 01112233344433332
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
. +++++.-...+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ~----------~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dl 122 (320)
T cd05590 53 R----------NHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL 122 (320)
T ss_pred c----------CCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 2 234433222334456678999999999999875431 122357788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+||+++.+|.++++|||++......... ......+.++++||.-. ...++.
T Consensus 123 kp~NIli~~~~~~kL~DfG~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (320)
T cd05590 123 KLDNVLLDHEGHCKLADFGMCKEGIFNGKT----------------TSTFCGTPDYIAPEILQ-----------EMLYGP 175 (320)
T ss_pred CHHHeEECCCCcEEEeeCCCCeecCcCCCc----------------ccccccCccccCHHHHc-----------CCCCCC
Confidence 999999999999999999998753211100 00011233455544211 112344
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..||...... .+.+. +.. .... .| ...++++++++++||
T Consensus 176 ~~DiwslG~il~el~~g--~~Pf~~~~~~-~~~~~------i~~---~~~~-----~~-------~~~~~~~~~li~~~L 231 (320)
T cd05590 176 SVDWWAMGVLLYEMLCG--HAPFEAENED-DLFEA------ILN---DEVV-----YP-------TWLSQDAVDILKAFM 231 (320)
T ss_pred ccchhhhHHHHHHHhhC--CCCCCCCCHH-HHHHH------Hhc---CCCC-----CC-------CCCCHHHHHHHHHHc
Confidence 56778888877776542 2333322211 11111 110 0110 11 245789999999999
Q ss_pred hccccCCCCH------HHHHhhhhH
Q 005274 507 YKEGVFRIDR------LESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~r------le~Ll~~~~ 525 (704)
.+||..|++. -+.+-|+.+
T Consensus 232 ~~dP~~R~~~~~~~~~~~~~~h~~f 256 (320)
T cd05590 232 TKNPTMRLGSLTLGGEEAILRHPFF 256 (320)
T ss_pred ccCHHHCCCCCCCCCHHHHHcCCCc
Confidence 9999999987 444555554
No 44
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.81 E-value=8.7e-20 Score=198.30 Aligned_cols=259 Identities=19% Similarity=0.206 Sum_probs=157.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||.||+|+.+.+|+.||||+.+..-. .-.+....+.+|++.+.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------~~~~~~~~~~~E~~il~~ 57 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-----------------------------LEKEQVAHVRAERDILAE 57 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-----------------------------hhhhHHHHHHHHHHHHHh
Confidence 579999999999999998999999999863200 001222345566666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-...+.......++||||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 58 l~h-----------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~D 126 (364)
T cd05599 58 ADN-----------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRD 126 (364)
T ss_pred CCC-----------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 543 4433333344556678999999999999876431 12235778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhh--------------cc---ChhH-----HHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLV--------------NR---DFDA-----LAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~--------------~~---d~~~-----la~d~~slG~l 403 (704)
+||+|||++.+|.++++|||++..+.............+.. .. .+.. ....+.+.+++
T Consensus 127 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 206 (364)
T cd05599 127 IKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYI 206 (364)
T ss_pred CCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCcccc
Confidence 99999999999999999999987654322111100000000 00 0000 00011234455
Q ss_pred CCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccc
Q 005274 404 PPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTY 483 (704)
Q Consensus 404 ~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~ 483 (704)
+||.- ....++...|.|++|+++.++.... .+|.-.... ...+.+. .+ .+.+.+
T Consensus 207 aPE~~-----------~~~~~~~~~DiwSlG~il~el~~G~--~Pf~~~~~~-~~~~~i~--~~-----~~~~~~----- 260 (364)
T cd05599 207 APEVF-----------LQTGYNKECDWWSLGVIMYEMLVGY--PPFCSDNPQ-ETYRKII--NW-----KETLQF----- 260 (364)
T ss_pred CHHHH-----------cCCCCCCeeeeecchhHHHHhhcCC--CCCCCCCHH-HHHHHHH--cC-----CCccCC-----
Confidence 54421 1223455678899999988876532 222211111 1111111 10 111111
Q ss_pred hhHHhhhccCCChHHHHHHHHhhhccccCCCC---HHHHHhhhhH
Q 005274 484 PYIARKVLTDSSPQLKSSLVALLYKEGVFRID---RLESLLTESL 525 (704)
Q Consensus 484 P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~---rle~Ll~~~~ 525 (704)
|. ....++++++++++||. +|..|++ ..+.|.|+.+
T Consensus 261 ~~-----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~ 299 (364)
T cd05599 261 PD-----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299 (364)
T ss_pred CC-----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence 10 01358899999999996 8999987 7777778765
No 45
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.81 E-value=2e-19 Score=189.61 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=100.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+....... .......+.+|+..++.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~E~~~l~~ 57 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-----------------------------RLKQEQHVHNEKRVLKE 57 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-----------------------------hhHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999997632100 00112345566666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| .++.+.+. +.......+++|||++|++|.++... ...-.++..++.+||+.|++|+|
T Consensus 58 l~h-p~iv~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 126 (291)
T cd05612 58 VSH-PFIIRLFW----------TEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRD 126 (291)
T ss_pred CCC-CcHhhhHh----------hhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 655 22222221 22234567899999999999876432 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+||.||+++.+|.++++|||++..+..
T Consensus 127 lkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 127 LKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred CCHHHeEECCCCCEEEEecCcchhccC
Confidence 999999999999999999999876543
No 46
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.81 E-value=2.2e-19 Score=191.38 Aligned_cols=236 Identities=21% Similarity=0.239 Sum_probs=151.5
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+-||.|+||.||.|.++++|+..|||...-.- ....+.+.+|+.++.
T Consensus 22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~--------------------------------~~~~~~l~~Ei~iL~ 69 (313)
T KOG0198|consen 22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELED--------------------------------SPTSESLEREIRILS 69 (313)
T ss_pred hccccCccceEEEEEEecCCCcceeeeeeeccc--------------------------------chhHHHHHHHHHHHH
Confidence 357999999999999999889999999764110 001456778888877
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecc-cceeEEEEeccCCChhhHHhh---hh-------HHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQT-TRKVLIMEWVEGQKLSEVKDL---YL-------IEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~s-s~~vLVmE~i~G~~L~d~~~~---~l-------~e~~v~~~L~qLh~~G~~ 342 (704)
+.+| .++.+.++.. .... ....+.|||+.|++|.++... .+ ...++..+|.|||++||+
T Consensus 70 ~l~~-p~IV~~~G~~---------~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~v 139 (313)
T KOG0198|consen 70 RLNH-PNIVQYYGSS---------SSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIV 139 (313)
T ss_pred hCCC-CCEEeeCCcc---------ccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 7764 2222222211 1111 257799999999999997542 12 236778899999999999
Q ss_pred ccCCCCCcEEEec-CCcEEEEecCCccccCh--h-------HHHHHHHHHHHhhccC-hhHHHHHHHhcCCCCCccchHH
Q 005274 343 HADPHPGNLFRSY-DGKLAYIDFGMMGEFKE--E-------LREGFIEACLHLVNRD-FDALAKDFVTLGLLPPTAEKEA 411 (704)
Q Consensus 343 H~DphPgNILv~~-dG~l~liDFGl~~~l~~--~-------~r~~~~~~~~~l~~~d-~~~la~d~~slG~l~p~~d~~~ 411 (704)
|||+||.|||+++ +|.+++.|||+++.... . .+..-..+.+.++... ....+.|+|++||+-=+
T Consensus 140 H~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvE----- 214 (313)
T KOG0198|consen 140 HCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVE----- 214 (313)
T ss_pred ccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEe-----
Confidence 9999999999999 79999999999987763 1 1111112334444422 22246777777775211
Q ss_pred HHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhc
Q 005274 412 VTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVL 491 (704)
Q Consensus 412 i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll 491 (704)
+ ++ +...|+- + ..........|... ..| .+.
T Consensus 215 -------M----~T-g~~PW~~---------------------~-~~~~~~~~~ig~~~-~~P--------------~ip 245 (313)
T KOG0198|consen 215 -------M----LT-GKPPWSE---------------------F-FEEAEALLLIGRED-SLP--------------EIP 245 (313)
T ss_pred -------c----cC-CCCcchh---------------------h-cchHHHHHHHhccC-CCC--------------CCC
Confidence 0 11 1112210 0 00001111111111 122 122
Q ss_pred cCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 492 TDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 492 ~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...|+++++.|++.+.+||..||++.+-|.|..+
T Consensus 246 ~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 246 DSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 4579999999999999999999999998888764
No 47
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.81 E-value=2.2e-19 Score=197.16 Aligned_cols=136 Identities=19% Similarity=0.274 Sum_probs=102.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||+||+|+.+.+|+.||||+.+.... .-.+....+..|++.+++
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-----------------------------~~~~~~~~~~~E~~il~~ 57 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-----------------------------LNRNQVAHVKAERDILAE 57 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-----------------------------hhhHHHHHHHHHHHHHHh
Confidence 569999999999999999999999999863100 001222345566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-...+.......++||||++|+.|.++... ...-.++..++.+||+.||+|||
T Consensus 58 l~h-----------~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 126 (381)
T cd05626 58 ADN-----------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRD 126 (381)
T ss_pred cCC-----------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 544 4444333444556778999999999999876432 22235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+|||++.+|+++++|||++..+
T Consensus 127 lKp~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 127 IKPDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred CcHHHEEECCCCCEEEeeCcCCccc
Confidence 9999999999999999999998654
No 48
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.81 E-value=1.5e-19 Score=193.93 Aligned_cols=239 Identities=18% Similarity=0.210 Sum_probs=148.7
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+.+.+|+.||+|+.++.... ..+....+.+|+..++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------~~~~~~~~~~E~~~l~~l 52 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVII-----------------------------AKDEVAHTVTESRVLQNT 52 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhHHHHHHHHHHHHHHhC
Confidence 589999999999999989999999998742110 001112233444444443
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
+| +++.-...........++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ~h-----------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl 121 (323)
T cd05595 53 RH-----------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121 (323)
T ss_pred CC-----------CCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 33 3333222234456678999999999999765421 122357788899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.|||++.+|.++++|||++......... ......+.++++||.-.. ..++.
T Consensus 122 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~~-----------~~~~~ 174 (323)
T cd05595 122 KLENLMLDKDGHIKITDFGLCKEGISDGAT----------------MKTFCGTPEYLAPEVLED-----------NDYGR 174 (323)
T ss_pred CHHHEEEcCCCCEEecccHHhccccCCCCc----------------cccccCCcCcCCcccccC-----------CCCCc
Confidence 999999999999999999987653211100 000112345555553211 12334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-. ....+.+.+. ..+..+ | ...++++++++++||
T Consensus 175 ~~DiwSlGvil~ell~g--~~Pf~~~-~~~~~~~~~~---------~~~~~~-----p-------~~~~~~~~~li~~~L 230 (323)
T cd05595 175 AVDWWGLGVVMYEMMCG--RLPFYNQ-DHERLFELIL---------MEEIRF-----P-------RTLSPEAKSLLAGLL 230 (323)
T ss_pred hhchhhhHHHHHHHHhC--CCCCCCC-CHHHHHHHHh---------cCCCCC-----C-------CCCCHHHHHHHHHHc
Confidence 45777888777776642 2222211 1111111111 111111 1 356899999999999
Q ss_pred hccccCCC-----CHHHHHhhhhH
Q 005274 507 YKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~-----~rle~Ll~~~~ 525 (704)
.+||..|+ +..+.+-|+.+
T Consensus 231 ~~dP~~R~~~~~~~~~~~l~h~~~ 254 (323)
T cd05595 231 KKDPKQRLGGGPSDAKEVMEHRFF 254 (323)
T ss_pred cCCHHHhCCCCCCCHHHHHcCCCc
Confidence 99999998 66666666654
No 49
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=7.1e-20 Score=187.25 Aligned_cols=169 Identities=19% Similarity=0.268 Sum_probs=124.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.||||.|||+....+|..||.|.+.=+. +...-...+..|+++++.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~------------------------------md~k~rq~~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM------------------------------MDAKARQDCVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhh------------------------------ccHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999765221 112234567789999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccc-eeEEEEeccCCChhhHHhh------hhHH-------HHHHHHHHHHHH--
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTR-KVLIMEWVEGQKLSEVKDL------YLIE-------VGVYCSFNQLLE-- 338 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~-~vLVmE~i~G~~L~d~~~~------~l~e-------~~v~~~L~qLh~-- 338 (704)
++| .++.+.+.+.-+ + ... .+||||||++++|+++... .+.| .+++.+|..+|.
T Consensus 75 L~H-pNIVqYy~~~f~--------~-~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 75 LNH-PNIVQYYAHSFI--------E-DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred cCC-chHHHHHHHhhh--------c-cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 998 566665542111 1 223 5799999999999998643 2344 345556666676
Q ss_pred CC--ccccCCCCCcEEEecCCcEEEEecCCccccChhHHH--HHHH----HHHHhhccChhHHHHHHHhcCCC
Q 005274 339 KG--FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE--GFIE----ACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 339 ~G--~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~--~~~~----~~~~l~~~d~~~la~d~~slG~l 403 (704)
.. ++|||+||+||+++.+|.+|+.|||+.+.++....- .+.+ +.+..+....+....|+|++||+
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCL 217 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence 44 999999999999999999999999999988766432 2222 34556666777778888888886
No 50
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.81 E-value=7.3e-21 Score=195.34 Aligned_cols=185 Identities=24% Similarity=0.373 Sum_probs=138.0
Q ss_pred HHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhcc
Q 005274 172 VAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFN 251 (704)
Q Consensus 172 ~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~ 251 (704)
..++.=+..|.++++++|.-+. .+|.||||.||+|.++.+|+.||||...- .
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--------------------------~ 69 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVPV--------------------------D 69 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecCc--------------------------c
Confidence 3455667789999999999884 59999999999999999999999997641 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---hhHH--
Q 005274 252 TDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---YLIE-- 326 (704)
Q Consensus 252 ~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~l~e-- 326 (704)
.|++++ ..|+.+++..+. ....++|+. |+ -.+..++|||||..++++|+.+. .+.+
T Consensus 70 sDLQEI--------IKEISIMQQC~S-~yVVKYYGS---------YF-K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~E 130 (502)
T KOG0574|consen 70 TDLQEI--------IKEISIMQQCKS-KYVVKYYGS---------YF-KHSDLWIVMEYCGAGSISDIMRARRKPLSEQE 130 (502)
T ss_pred chHHHH--------HHHHHHHHHcCC-chhhhhhhh---------hc-cCCceEeehhhcCCCcHHHHHHHhcCCccHHH
Confidence 344433 456666666654 223333331 11 14678999999999999998653 2333
Q ss_pred -----HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhH--HHHHHH----HHHHhhccChhHHHH
Q 005274 327 -----VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL--REGFIE----ACLHLVNRDFDALAK 395 (704)
Q Consensus 327 -----~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~--r~~~~~----~~~~l~~~d~~~la~ 395 (704)
.....+|+|||...-+|||+|.||||++.+|..++.|||.++++++.+ |.+.++ +.+.++..-.|....
T Consensus 131 Is~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~A 210 (502)
T KOG0574|consen 131 ISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKA 210 (502)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhh
Confidence 233457899999999999999999999999999999999999998764 334433 334456555666788
Q ss_pred HHHhcCCC
Q 005274 396 DFVTLGLL 403 (704)
Q Consensus 396 d~~slG~l 403 (704)
|+|++|+.
T Consensus 211 DIWSLGIT 218 (502)
T KOG0574|consen 211 DIWSLGIT 218 (502)
T ss_pred hHhhhcch
Confidence 99999985
No 51
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.80 E-value=2.4e-19 Score=195.99 Aligned_cols=136 Identities=21% Similarity=0.339 Sum_probs=102.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.+..-. ...+....+.+|++.+++
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-----------------------------~~~~~~~~~~~E~~il~~ 57 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-----------------------------LMRNQAAHVKAERDILAE 57 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-----------------------------HhhhhHHHHHHHHHHHHh
Confidence 579999999999999999999999999763200 001122445567777766
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
+.| ++|.-....++..+..++||||++|++|.++... ...-.++..++.+||+.||+|||
T Consensus 58 l~h-----------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrD 126 (376)
T cd05598 58 ADN-----------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRD 126 (376)
T ss_pred CCC-----------CCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 655 3333333344556778999999999999887432 11235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+|||++.+|.++++|||++..+
T Consensus 127 lkp~Nill~~~~~ikL~DFG~a~~~ 151 (376)
T cd05598 127 IKPDNILIDRDGHIKLTDFGLCTGF 151 (376)
T ss_pred CCHHHEEECCCCCEEEEeCCCCccc
Confidence 9999999999999999999997643
No 52
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.80 E-value=3.1e-19 Score=192.03 Aligned_cols=228 Identities=19% Similarity=0.208 Sum_probs=145.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+..... ..+....+.+|+..++.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~E~~~l~~ 74 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-----------------------------KMKQVQHVAQEKSILME 74 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-----------------------------hhhhHHHHHHHHHHHHh
Confidence 6799999999999999989999999998632100 00112334455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+....+..+++|||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 75 l~h-----------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d 143 (329)
T PTZ00263 75 LSH-----------PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRD 143 (329)
T ss_pred CCC-----------CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 443 3433333344556778999999999999876431 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||.|||++.+|.++++|||++..+...... . ..+.++++||.- ....++
T Consensus 144 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~------------------~gt~~y~aPE~~-----------~~~~~~ 193 (329)
T PTZ00263 144 LKPENLLLDNKGHVKVTDFGFAKKVPDRTFT-L------------------CGTPEYLAPEVI-----------QSKGHG 193 (329)
T ss_pred CCHHHEEECCCCCEEEeeccCceEcCCCcce-e------------------cCChhhcCHHHH-----------cCCCCC
Confidence 9999999999999999999999876542210 0 012233343321 111234
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..+|.-.... .+.+.+ .+| .+.+ | ...++++++++++|
T Consensus 194 ~~~DiwslG~il~elltg--~~pf~~~~~~-~~~~~i--~~~-------~~~~-----p-------~~~~~~~~~li~~~ 249 (329)
T PTZ00263 194 KAVDWWTMGVLLYEFIAG--YPPFFDDTPF-RIYEKI--LAG-------RLKF-----P-------NWFDGRARDLVKGL 249 (329)
T ss_pred CcceeechHHHHHHHHcC--CCCCCCCCHH-HHHHHH--hcC-------CcCC-----C-------CCCCHHHHHHHHHH
Confidence 456778888887776542 2222211111 111111 111 1111 1 23578899999999
Q ss_pred hhccccCCCCH
Q 005274 506 LYKEGVFRIDR 516 (704)
Q Consensus 506 L~~d~~~R~~r 516 (704)
|.+||..|+++
T Consensus 250 L~~dP~~R~~~ 260 (329)
T PTZ00263 250 LQTDHTKRLGT 260 (329)
T ss_pred hhcCHHHcCCC
Confidence 99999999985
No 53
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.80 E-value=7e-19 Score=188.20 Aligned_cols=240 Identities=19% Similarity=0.181 Sum_probs=148.0
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+.+.+|+.||||+.++..... +........|...+..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~- 51 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-----------------------------DDDVECTMVERRVLAL- 51 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----------------------------hhhHHHHHHHHHHHHh-
Confidence 5899999999999999899999999987432100 0001112222222221
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
..+++++.....+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 52 ---------~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl 122 (316)
T cd05592 52 ---------AWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDL 122 (316)
T ss_pred ---------ccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 12334443333344455678899999999999776431 123357788899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+||+++.+|.++++|||++......... ......+.++++|+.-. ...++.
T Consensus 123 kp~Nill~~~~~~kL~Dfg~a~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (316)
T cd05592 123 KLDNVLLDKDGHIKIADFGMCKENMNGEGK----------------ASTFCGTPDYIAPEILK-----------GQKYNE 175 (316)
T ss_pred CHHHeEECCCCCEEEccCcCCeECCCCCCc----------------cccccCCccccCHHHHc-----------CCCCCC
Confidence 999999999999999999998754321100 00011234455554211 122344
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-... ..+...+. ...|.+ | ...++++++++++||
T Consensus 176 ~~DvwslG~il~ell~G--~~Pf~~~~~-~~~~~~i~-------~~~~~~-------~-------~~~~~~~~~ll~~~l 231 (316)
T cd05592 176 SVDWWSFGVLLYEMLIG--QSPFHGEDE-DELFDSIL-------NDRPHF-------P-------RWISKEAKDCLSKLF 231 (316)
T ss_pred cccchhHHHHHHHHHhC--CCCCCCCCH-HHHHHHHH-------cCCCCC-------C-------CCCCHHHHHHHHHHc
Confidence 56788888888777642 233322111 11111111 111111 1 246788999999999
Q ss_pred hccccCCCCHHHHHh-hhhH
Q 005274 507 YKEGVFRIDRLESLL-TESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll-~~~~ 525 (704)
..||..|++..+.++ |..+
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~ 251 (316)
T cd05592 232 ERDPTKRLGVDGDIRQHPFF 251 (316)
T ss_pred cCCHHHcCCChHHHHcCccc
Confidence 999999998765554 4443
No 54
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.80 E-value=3.9e-19 Score=193.46 Aligned_cols=138 Identities=21% Similarity=0.305 Sum_probs=101.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||+||+|+.+.+|+.||||+.++.... -.+....+..|+..+.+
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 57 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-----------------------------EKEQVAHIRAERDILVE 57 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-----------------------------hhhhHHHHHHHHHHHHh
Confidence 5799999999999999999999999998632100 01122344455555444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-.....+.....++||||++|++|.+.... ...-.++..++.+||+.|++|||
T Consensus 58 l~~-----------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrD 126 (360)
T cd05627 58 ADG-----------AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRD 126 (360)
T ss_pred CCC-----------CCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccC
Confidence 433 3333222334445678999999999999887431 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+||+||+++.+|.++++|||++..+..
T Consensus 127 Lkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 127 IKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred CCHHHEEECCCCCEEEeeccCCccccc
Confidence 999999999999999999999886654
No 55
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.80 E-value=4e-19 Score=189.40 Aligned_cols=238 Identities=17% Similarity=0.191 Sum_probs=148.9
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|+||.||+|+.+.+|+.||||+.++.... .......+.+|+..+...+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-----------------------------~~~~~~~~~~E~~~l~~l~ 51 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-----------------------------SRSEVTHTLAERTVLAQVN 51 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhHHHHHHHHHHHHHhCC
Confidence 69999999999999989999999997632100 0011122334444443332
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
++++.-...+.......++||||++|++|.+.... ...-.++..++.+||+.|++|||+|
T Consensus 52 -----------h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 52 -----------CPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -----------CCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 24443333344556778999999999999876431 1223577788999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhcc
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKG 427 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~ 427 (704)
|+||+++.+|.++++|||++......... ......+.++++||.-. ...++..
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~~ 173 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDDDK----------------TNTFCGTPEYLAPELLL-----------GHGYTKA 173 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCCCc----------------cccccCCcccCCHHHHc-----------CCCCCCc
Confidence 99999999999999999998753221100 00011234455555211 1223445
Q ss_pred CCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhh
Q 005274 428 VRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLY 507 (704)
Q Consensus 428 ~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~ 507 (704)
.|.|++|.++.++... ..+|.-. ....+.+.+. . ..+. +....++++++++.+||.
T Consensus 174 ~DvwslGvil~el~tg--~~pf~~~-~~~~~~~~~~------~---~~~~------------~~~~~~~~~~~li~~~L~ 229 (312)
T cd05585 174 VDWWTLGVLLYEMLTG--LPPFYDE-NVNEMYRKIL------Q---EPLR------------FPDGFDRDAKDLLIGLLS 229 (312)
T ss_pred cceechhHHHHHHHhC--CCCcCCC-CHHHHHHHHH------c---CCCC------------CCCcCCHHHHHHHHHHcC
Confidence 6788888888777642 1222111 1111111111 0 0111 113568899999999999
Q ss_pred ccccCCCC---HHHHHhhhhH
Q 005274 508 KEGVFRID---RLESLLTESL 525 (704)
Q Consensus 508 ~d~~~R~~---rle~Ll~~~~ 525 (704)
+||..|++ +.+.|.|+.+
T Consensus 230 ~dp~~R~~~~~~~e~l~hp~~ 250 (312)
T cd05585 230 RDPTRRLGYNGAQEIKNHPFF 250 (312)
T ss_pred CCHHHcCCCCCHHHHHcCCCc
Confidence 99999984 5666777765
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.80 E-value=1.3e-18 Score=187.20 Aligned_cols=136 Identities=21% Similarity=0.294 Sum_probs=102.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|..||+|+.+..... +....+.+|++.+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP-------------------------------AIRNQIIRELQVLHE 59 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCH-------------------------------HHHHHHHHHHHHHHH
Confidence 5699999999999999999999999998754221 223455667776666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHC-Ccccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEK-GFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~-G~~H~ 344 (704)
.+| +++.-..-+....+..++||||++|++|.++... ...-.++..++.+||+. |++|+
T Consensus 60 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~ 128 (331)
T cd06649 60 CNS-----------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 128 (331)
T ss_pred CCC-----------CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence 554 3332222233445678999999999999887532 11225677889999985 69999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||+||+++.+|.++++|||++..+..
T Consensus 129 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 129 DVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred CCChhhEEEcCCCcEEEccCcccccccc
Confidence 9999999999999999999999886644
No 57
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.80 E-value=6.8e-19 Score=189.36 Aligned_cols=135 Identities=20% Similarity=0.240 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+.+.+|+.||||+.++..... .+....+..|...+...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-----------------------------~~~~~~~~~e~~il~~~ 52 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-----------------------------DEDIDWVQTEKHVFETA 52 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----------------------------hhHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999987431100 01112233444433332
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.++++|.--..+.+..+..++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ----------~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dl 122 (329)
T cd05588 53 ----------SNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDL 122 (329)
T ss_pred ----------cCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 2234443223334456678999999999999765421 122357778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~ 369 (704)
||+||+++.+|.++++|||+++.
T Consensus 123 kp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 123 KLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred CHHHeEECCCCCEEECcCccccc
Confidence 99999999999999999999864
No 58
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.80 E-value=7.9e-19 Score=187.90 Aligned_cols=240 Identities=19% Similarity=0.128 Sum_probs=145.4
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||+||+|+.+.+|+.||||+.+++... .++.......|...+...
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~il~~~ 52 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-----------------------------QDDDVDCTMTEKRILALA 52 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-----------------------------hhhHHHHHHHHHHHHHhc
Confidence 589999999999999989999999998643110 001112223333333222
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.++++|.....+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ----------~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDi 122 (321)
T cd05591 53 ----------AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDL 122 (321)
T ss_pred ----------cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 2334443333344556678999999999999765421 122357788899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.||+++.+|.++++|||++......... ......+.++++|+.-. ...++.
T Consensus 123 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (321)
T cd05591 123 KLDNILLDAEGHCKLADFGMCKEGILNGVT----------------TTTFCGTPDYIAPEILQ-----------ELEYGP 175 (321)
T ss_pred CHHHeEECCCCCEEEeecccceecccCCcc----------------ccccccCccccCHHHHc-----------CCCCCC
Confidence 999999999999999999998753211100 00001123344443210 112344
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..|+.-...- .+...+. . -++. .| ...+++++++++.||
T Consensus 176 ~~DvwslG~il~el~tg--~~Pf~~~~~~-~~~~~i~------~-~~~~-------~p-------~~~~~~~~~ll~~~L 231 (321)
T cd05591 176 SVDWWALGVLMYEMMAG--QPPFEADNED-DLFESIL------H-DDVL-------YP-------VWLSKEAVSILKAFM 231 (321)
T ss_pred ccceechhHHHHHHhcC--CCCCCCCCHH-HHHHHHH------c-CCCC-------CC-------CCCCHHHHHHHHHHh
Confidence 56778888877776542 2233221111 1111111 0 0110 11 135789999999999
Q ss_pred hccccCCC-------CHHHHHhhhhH
Q 005274 507 YKEGVFRI-------DRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~-------~rle~Ll~~~~ 525 (704)
.+||..|+ +.-+.+-|+.+
T Consensus 232 ~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 232 TKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred ccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 99999998 55555555543
No 59
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.80 E-value=1.6e-19 Score=196.38 Aligned_cols=246 Identities=20% Similarity=0.223 Sum_probs=169.6
Q ss_pred ChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHH
Q 005274 184 PIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWAS 263 (704)
Q Consensus 184 ~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~ 263 (704)
++..+|.-|..+.+|+|-||.||-|++++||+.|||||+.+- ++.. .-..
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl-------------------------rFp~-----kqes 608 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL-------------------------RFPT-----KQES 608 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc-------------------------cCCC-----chHH
Confidence 467888889999999999999999999999999999998531 0000 0114
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---h-------hhHHHHHHHHH
Q 005274 264 SLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---L-------YLIEVGVYCSF 333 (704)
Q Consensus 264 ~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---~-------~l~e~~v~~~L 333 (704)
++..|+.+++...| |.|+--....|...+.+.|||-+.|.-|.-+.. . ++.-.++.++|
T Consensus 609 qlR~EVaILq~l~H-----------PGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~AL 677 (888)
T KOG4236|consen 609 QLRNEVAILQNLHH-----------PGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVAL 677 (888)
T ss_pred HHHHHHHHHHhcCC-----------CCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 55666666655544 888888888999999999999999977765532 1 23447899999
Q ss_pred HHHHHCCccccCCCCCcEEEec---CCcEEEEecCCccccChh-HHHHHHH----HHHHhhccChhHHHHHHHhcCCCCC
Q 005274 334 NQLLEKGFYHADPHPGNLFRSY---DGKLAYIDFGMMGEFKEE-LREGFIE----ACLHLVNRDFDALAKDFVTLGLLPP 405 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~---dG~l~liDFGl~~~l~~~-~r~~~~~----~~~~l~~~d~~~la~d~~slG~l~p 405 (704)
++||..||+|||+||+|+|+.. -.++|+||||.++.+.+. +|+...+ +.+.++.+..+.-.-|||+.|++
T Consensus 678 r~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVI-- 755 (888)
T KOG4236|consen 678 RYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVI-- 755 (888)
T ss_pred HHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEE--
Confidence 9999999999999999999854 358999999999999875 4544332 22333333333334455555554
Q ss_pred ccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchh
Q 005274 406 TAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPY 485 (704)
Q Consensus 406 ~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~ 485 (704)
+.-- +--.|||.-..++..-|.. -.++-...||
T Consensus 756 -------------------------------iYVs--LSGTFPFNEdEdIndQIQN--------------AaFMyPp~PW 788 (888)
T KOG4236|consen 756 -------------------------------IYVS--LSGTFPFNEDEDINDQIQN--------------AAFMYPPNPW 788 (888)
T ss_pred -------------------------------EEEE--ecccccCCCccchhHHhhc--------------cccccCCCch
Confidence 1000 0012333333333222211 1122223466
Q ss_pred HHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 486 IARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 486 i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...|+++.|++..+|+..=++|.+--++|-|.-+
T Consensus 789 ------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 789 ------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWL 822 (888)
T ss_pred ------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhh
Confidence 3689999999999999988999998888888765
No 60
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.80 E-value=5.1e-19 Score=193.73 Aligned_cols=136 Identities=19% Similarity=0.273 Sum_probs=99.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+....-. . ..+....+..|++.+..
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~---------------------------~~~~~~~~~~E~~il~~ 57 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--F---------------------------KKDQLAHVKAERDVLAE 57 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--H---------------------------HhHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999753100 0 00112334455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|||
T Consensus 58 l~h-----------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrD 126 (377)
T cd05629 58 SDS-----------PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRD 126 (377)
T ss_pred CCC-----------CCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 433 4433333344556678999999999999876421 12335778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+|||++.+|.++++|||+++.+
T Consensus 127 lkp~NIll~~~~~~kl~DfGla~~~ 151 (377)
T cd05629 127 IKPDNILIDRGGHIKLSDFGLSTGF 151 (377)
T ss_pred CCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999999999999998754
No 61
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.80 E-value=5.9e-19 Score=191.34 Aligned_cols=274 Identities=18% Similarity=0.210 Sum_probs=149.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+...+|+.||||+....... ........+|+..++.
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 72 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN------------------------------QTHAKRAYRELVLMKC 72 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccC------------------------------hHHHHHHHHHHHHHHH
Confidence 6899999999999999889999999987643211 0112344566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh------hhhHHHHHHHHHHHHHHCCccccCCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD------LYLIEVGVYCSFNQLLEKGFYHADPHP 348 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~------~~l~e~~v~~~L~qLh~~G~~H~DphP 348 (704)
.+| .++.+.++ +..+....+.....+++|||++|........ ....-.++..+|.+||+.|++|+|+||
T Consensus 73 l~h-~niv~~~~----~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp 147 (355)
T cd07874 73 VNH-KNIISLLN----VFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 147 (355)
T ss_pred hCC-Cchhceee----eeeccccccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 554 22222211 1111111122245689999998753332211 112335778899999999999999999
Q ss_pred CcEEEecCCcEEEEecCCccccChhHHH-----HHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 349 GNLFRSYDGKLAYIDFGMMGEFKEELRE-----GFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 349 gNILv~~dG~l~liDFGl~~~l~~~~r~-----~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+||+++.+|.++++|||+++........ ......+.+..+.......|+|++|++ +.+++...
T Consensus 148 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i------------l~el~~g~ 215 (355)
T cd07874 148 SNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI------------MGEMVRHK 215 (355)
T ss_pred HHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHH------------HHHHHhCC
Confidence 9999999999999999999865443211 011122333333333445667776654 22222111
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCcccc-------ccchhHHhhhccCCCh
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLG-------STYPYIARKVLTDSSP 496 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~-------~a~P~i~r~ll~d~sp 496 (704)
.++...+..+ .+...+.......|.....+...... . ..-.|++.-.. ...|.. ...-...+.
T Consensus 216 --~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (355)
T cd07874 216 --ILFPGRDYID---QWNKVIEQLGTPCPEFMKKLQPTVRN---Y-VENRPKYAGLTFPKLFPDSLFPAD-SEHNKLKAS 285 (355)
T ss_pred --CCCCCCCHHH---HHHHHHHHhCCCCHHHHHhhcHHHHH---H-HhcCCccccccchhhccccccccc-cccccccch
Confidence 0111111111 12222222222222222111111000 0 00112221100 000100 001122356
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++++.+||..||..|++.-|.|.|+.+
T Consensus 286 ~~~~li~~mL~~dP~~Rps~~ell~hp~~ 314 (355)
T cd07874 286 QARDLLSKMLVIDPAKRISVDEALQHPYI 314 (355)
T ss_pred HHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence 78999999999999999999999999876
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.80 E-value=4e-19 Score=191.53 Aligned_cols=259 Identities=16% Similarity=0.157 Sum_probs=153.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+|+.||||+.+..... ..+....+..|++.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 57 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-----------------------------KRNQIAHVRAERDILAD 57 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-----------------------------hccHHHHHHHHHHHHHh
Confidence 5699999999999999989999999998632100 00112334455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-...++......++||||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 58 ~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~D 126 (350)
T cd05573 58 ADS-----------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRD 126 (350)
T ss_pred cCC-----------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 543 3322222233445678999999999999887432 12235778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHH--HH---------Hh--hccChhHHHHHHHhcCCCCCccchHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEA--CL---------HL--VNRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~--~~---------~l--~~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
+||.||+++.+|.++++|||++..+........... .. .. .............+.++++||.-
T Consensus 127 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---- 202 (350)
T cd05573 127 IKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVL---- 202 (350)
T ss_pred CCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHH----
Confidence 999999999999999999999887654320000000 00 00 00000000011123344444421
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
....++...|.|++|.++.++... ..++....... ....+. .. ...+.+ |. ..
T Consensus 203 -------~~~~~~~~~DiwSlG~il~ell~g--~~Pf~~~~~~~-~~~~i~--~~-----~~~~~~-----p~-----~~ 255 (350)
T cd05573 203 -------RGTPYGLECDWWSLGVILYEMLYG--FPPFYSDTLQE-TYNKII--NW-----KESLRF-----PP-----DP 255 (350)
T ss_pred -------cCCCCCCceeeEecchhhhhhccC--CCCCCCCCHHH-HHHHHh--cc-----CCcccC-----CC-----CC
Confidence 112344556788888887776642 22332221111 111111 00 001110 10 01
Q ss_pred CCChHHHHHHHHhhhccccCCCC-HHHHHhhhhH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRID-RLESLLTESL 525 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~-rle~Ll~~~~ 525 (704)
..+++++++++.||. ||..|++ .-+.|.|+.+
T Consensus 256 ~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~ 288 (350)
T cd05573 256 PVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288 (350)
T ss_pred CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence 258999999999997 9999999 7777777665
No 63
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.80 E-value=6e-19 Score=192.11 Aligned_cols=273 Identities=18% Similarity=0.204 Sum_probs=150.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+....... .+....+.+|+..++.
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 79 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN------------------------------QTHAKRAYRELVLMKC 79 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccC------------------------------chhHHHHHHHHHHHHh
Confidence 5799999999999999989999999997643211 0112344566666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
.+| .++...+ .+..+.-..+.....++||||++|. +.+.... ...-.++..++.+||+.|++|+|+|
T Consensus 80 l~h-~~ii~~~----~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 153 (364)
T cd07875 80 VNH-KNIIGLL----NVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153 (364)
T ss_pred cCC-CCccccc----eeecccccccccCeEEEEEeCCCCC-HHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence 544 1221111 1111111112234568999999874 4433221 1233677889999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCccccChhHHH-----HHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKEELRE-----GFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~~~r~-----~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|+||+++.+|.++++|||+++........ ......+.++.+.......|+|++|++ +.+++.+
T Consensus 154 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i------------l~ell~g 221 (364)
T cd07875 154 PSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI------------MGEMIKG 221 (364)
T ss_pred HHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHH------------HHHHHhC
Confidence 99999999999999999999765432110 111122333333334456677777764 2222221
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCcccc-------ccchhHHhhhccCCC
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLG-------STYPYIARKVLTDSS 495 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~-------~a~P~i~r~ll~d~s 495 (704)
. .++...+..+.. ..++...+...| .+...+..... . ...-.|.+.-.. ...|+. ...-...+
T Consensus 222 ~--~pf~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 291 (364)
T cd07875 222 G--VLFPGTDHIDQW---NKVIEQLGTPCP-EFMKKLQPTVR--T-YVENRPKYAGYSFEKLFPDVLFPAD-SEHNKLKA 291 (364)
T ss_pred C--CCCCCCCHHHHH---HHHHHhcCCCCH-HHHHhhhHHHH--H-HHhhCCCcCCCChHhhCcccccccc-cccccccc
Confidence 0 112222222222 222222222222 22221111110 0 001112221100 001110 00111245
Q ss_pred hHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 496 PQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 496 p~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++++|.+||..||..|++.-+.|-|+.+
T Consensus 292 ~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred HHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 789999999999999999999999999876
No 64
>PTZ00284 protein kinase; Provisional
Probab=99.79 E-value=1.8e-18 Score=195.31 Aligned_cols=268 Identities=15% Similarity=0.091 Sum_probs=149.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||.||+|++..+|+.||||+.+... ........|+.++++
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---------------------------------~~~~~~~~e~~~l~~ 181 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---------------------------------KYTRDAKIEIQFMEK 181 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecch---------------------------------hhHHHHHHHHHHHHH
Confidence 57999999999999998899999999986310 111233456666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
.++... ..+...+.+...+.......++|||++ |+.|.+.... ..+-.++..+|.+||. .||+||
T Consensus 182 l~~~~~----~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHr 256 (467)
T PTZ00284 182 VRQADP----ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHT 256 (467)
T ss_pred HhhcCc----ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecC
Confidence 655211 111112223333333345678999998 5566554321 1223577889999997 599999
Q ss_pred CCCCCcEEEecCC----------------cEEEEecCCccccChhHHH---HHHHHHHHhhccChhHHHHHHHhcCCCCC
Q 005274 345 DPHPGNLFRSYDG----------------KLAYIDFGMMGEFKEELRE---GFIEACLHLVNRDFDALAKDFVTLGLLPP 405 (704)
Q Consensus 345 DphPgNILv~~dG----------------~l~liDFGl~~~l~~~~r~---~~~~~~~~l~~~d~~~la~d~~slG~l~p 405 (704)
|+||+|||++.+| .++|+|||.+......... ......++++.+..+..+.|+|++|++
T Consensus 257 DlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvi-- 334 (467)
T PTZ00284 257 DLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCI-- 334 (467)
T ss_pred CCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHH--
Confidence 9999999998765 4999999987543221110 011123344444445566778888775
Q ss_pred ccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHH-----HHHHhhhhhhhhcCCCCccc-
Q 005274 406 TAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVI-----RSLAVLEGIAISSNPNYKVL- 479 (704)
Q Consensus 406 ~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~lii-----Rsl~~lEGi~~~ldP~~~i~- 479 (704)
+.+++.+. .+++..+-.+.+ ..+.+....+|..+.... +.+... ...+.|.++.-
T Consensus 335 ----------l~elltG~--~pf~~~~~~~~~----~~i~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 395 (467)
T PTZ00284 335 ----------IYELYTGK--LLYDTHDNLEHL----HLMEKTLGRLPSEWAGRCGTEEARLLYNS---AGQLRPCTDPKH 395 (467)
T ss_pred ----------HHHHHhCC--CCCCCCChHHHH----HHHHHHcCCCCHHHHhhccchhHHHHhhh---cccccccCCHHH
Confidence 22222211 112221211111 112222223444432110 000000 00111111100
Q ss_pred ----cccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 480 ----GSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 480 ----~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
....+. ..+ ..++.+.++|++||.+||..|+++-|.|-|+.+
T Consensus 396 ~~~~~~~~~~--~~~--~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 396 LARIARARPV--REV--IRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred HHhhhcccch--hhh--hchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 000010 011 135788999999999999999999999999987
No 65
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=8.4e-19 Score=174.87 Aligned_cols=172 Identities=20% Similarity=0.232 Sum_probs=109.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.+||+|++|+||+|++. +|+.||||+.+++... ...+...+.....+.... ...+...++.+ ....|
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~E 69 (190)
T cd05145 3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLS-FKDRDKYIEGDPRFRSRY--SKSNPRKLVFA---------WAEKE 69 (190)
T ss_pred ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcce-EeeHHHHhcCCccccccc--ccCCHHHHHHH---------HHHHH
Confidence 58999999999999987 9999999999987432 111111100000000000 00111111111 12356
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhH--Hhh-------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEV--KDL-------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~--~~~-------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
.+++.++.+ +++.+|.++.. ...+|||||++|..+... ... .-+-.++..++.++|. .|++|+
T Consensus 70 ~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHr 142 (190)
T cd05145 70 FRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHG 142 (190)
T ss_pred HHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 666666554 45677777653 346999999999754321 111 1122466778899999 999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHH
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALA 394 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la 394 (704)
|+||+||+++ +|+++++|||+++.++...- ..++.+|+..+.
T Consensus 143 DlkP~NIll~-~~~~~liDFG~a~~~~~~~~-------~~~~~~~~~~~~ 184 (190)
T cd05145 143 DLSEYNILYH-DGKPYIIDVSQAVELDHPNA-------LEFLRRDIRNIN 184 (190)
T ss_pred CCChhhEEEE-CCCEEEEEcccceecCCCCH-------HHHHHHHHHHHH
Confidence 9999999998 89999999999998876532 234556665544
No 66
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.79 E-value=5.1e-19 Score=192.30 Aligned_cols=136 Identities=22% Similarity=0.327 Sum_probs=94.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+....... ......+.+|+..++.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 76 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN------------------------------QTHAKRAYRELVLLKC 76 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccc------------------------------hhHHHHHHHHHHHHHh
Confidence 6899999999999999989999999997633211 0112334456655555
Q ss_pred HhhHHHHHHHhcCCccee-eceeee-----ecccceeEEEEeccCCChhhHHh------hhhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYV-----EQTTRKVLIMEWVEGQKLSEVKD------LYLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~-----e~ss~~vLVmE~i~G~~L~d~~~------~~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++. +..++. +.....++||||++|........ ....-.++..++.+||+.|++
T Consensus 77 l~h-----------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv 145 (359)
T cd07876 77 VNH-----------KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGII 145 (359)
T ss_pred CCC-----------CCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 444 2221 112221 11234689999998754332211 112235788899999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|+||+||+++.+|.++++|||+++...
T Consensus 146 HrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 146 HRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 99999999999999999999999987643
No 67
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.79 E-value=1.6e-18 Score=186.84 Aligned_cols=142 Identities=23% Similarity=0.306 Sum_probs=100.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|+||+||+|+...+|+.||||+........ .....+.+|+..++.
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------~~~~~~~~E~~~l~~ 70 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL------------------------------IHARRTYRELRLLKH 70 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh------------------------------HHHHHHHHHHHHHHh
Confidence 68999999999999998899999999986432110 112334567777776
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| .++.+.+. +..+....+.....+++||++ |++|.++... ...-.++..++.+||+.|++|+|+
T Consensus 71 l~h-~~iv~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdi 144 (343)
T cd07878 71 MKH-ENVIGLLD----VFTPATSIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDL 144 (343)
T ss_pred cCC-Cchhhhhh----hhcccccccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccC
Confidence 655 22332222 111111112234578999998 6677765431 123367788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccCh
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
||+||+++.+|.++++|||++.....
T Consensus 145 kp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 145 KPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred ChhhEEECCCCCEEEcCCccceecCC
Confidence 99999999999999999999887654
No 68
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.79 E-value=4.6e-19 Score=194.40 Aligned_cols=136 Identities=21% Similarity=0.325 Sum_probs=100.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||+||+|+.+.+|+.||||+.+..-. ...+....+.+|++.+++
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-----------------------------~~~~~~~~~~~E~~il~~ 57 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-----------------------------LLRNQVAHVKAERDILAE 57 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-----------------------------hhHHHHHHHHHHHHHHHh
Confidence 579999999999999999999999999763200 001222345566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ++|.-...........++||||++|++|.+.... ...-.++..++.+||+.||+|||
T Consensus 58 ~~h-----------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrD 126 (382)
T cd05625 58 ADN-----------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRD 126 (382)
T ss_pred CCC-----------CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 544 3333222333445678999999999999876432 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+|||++.+|.++++|||++..+
T Consensus 127 lKp~NILl~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 127 IKPDNILIDRDGHIKLTDFGLCTGF 151 (382)
T ss_pred CCHHHEEECCCCCEEEeECCCCccc
Confidence 9999999999999999999997643
No 69
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.79 E-value=1.2e-18 Score=192.82 Aligned_cols=159 Identities=18% Similarity=0.145 Sum_probs=109.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+... ..+.+|+..++.
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------------------------------------~~~~~E~~il~~ 139 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------------------------------------GGTATEAHILRA 139 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh--------------------------------------hhhHHHHHHHHh
Confidence 569999999999999999999999996421 123456666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ++|.-..-+.......+++||++.| .|.+.... ..+-.++..+|.++|+.|++|||
T Consensus 140 l~H-----------pnIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD 207 (391)
T PHA03212 140 INH-----------PSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRD 207 (391)
T ss_pred CCC-----------CCCCCEeEEEEECCeeEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 554 3433222234456678899999965 55444221 12226778899999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHH---HH----HHHHHHHhhccChhHHHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELR---EG----FIEACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r---~~----~~~~~~~l~~~d~~~la~d~~slG~l 403 (704)
+||+||+++.+|.++++|||++........ .. .....++++.+..+....|+|++|++
T Consensus 208 iKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 272 (391)
T PHA03212 208 IKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIV 272 (391)
T ss_pred CChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHH
Confidence 999999999999999999999865322111 11 11123445555555667788888765
No 70
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.79 E-value=9.5e-19 Score=187.17 Aligned_cols=240 Identities=20% Similarity=0.178 Sum_probs=146.9
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||.|+||.||+|+.+.+|+.||||+.+++... .++.......|...+...
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~~ 52 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-----------------------------IDDDVECTMVEKRVLALA 52 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hcchHHHHHHHHHHHHhc
Confidence 589999999999999999999999998743210 000111222232222211
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+++++.-...+.+..+..++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ----------~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDl 122 (316)
T cd05620 53 ----------WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDL 122 (316)
T ss_pred ----------cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 1234433222334556678999999999999766431 122357788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+||+++.+|.++++|||++......... ......+.++++||.-. ...++.
T Consensus 123 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (316)
T cd05620 123 KLDNVMLDRDGHIKIADFGMCKENVFGDNR----------------ASTFCGTPDYIAPEILQ-----------GLKYTF 175 (316)
T ss_pred CHHHeEECCCCCEEeCccCCCeecccCCCc----------------eeccCCCcCccCHHHHc-----------CCCCCc
Confidence 999999999999999999998643211000 00011234455444211 112334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-... ..+.+.+ . ...|.+ | ...++++++++++||
T Consensus 176 ~~DiwslGvil~el~~g--~~Pf~~~~~-~~~~~~~------~-~~~~~~-------~-------~~~~~~~~~li~~~l 231 (316)
T cd05620 176 SVDWWSFGVLLYEMLIG--QSPFHGDDE-DELFESI------R-VDTPHY-------P-------RWITKESKDILEKLF 231 (316)
T ss_pred ccchhhhHHHHHHHHhC--CCCCCCCCH-HHHHHHH------H-hCCCCC-------C-------CCCCHHHHHHHHHHc
Confidence 46778888777776642 233322111 1111111 1 111211 1 236889999999999
Q ss_pred hccccCCCCHHHHHh-hhhH
Q 005274 507 YKEGVFRIDRLESLL-TESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll-~~~~ 525 (704)
..||..|++..+.++ |+.+
T Consensus 232 ~~dP~~R~~~~~~~~~h~~f 251 (316)
T cd05620 232 ERDPTRRLGVVGNIRGHPFF 251 (316)
T ss_pred cCCHHHcCCChHHHHcCCCc
Confidence 999999999876666 6654
No 71
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.79 E-value=4.6e-19 Score=193.25 Aligned_cols=139 Identities=22% Similarity=0.299 Sum_probs=101.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.+..... -.+....+..|+..+.+
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~E~~il~~ 57 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-----------------------------EKEQVGHIRAERDILVE 57 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-----------------------------HhhHHHHHHHHHHHHHh
Confidence 5799999999999999989999999998632100 01122344556665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-.....+.....++||||++|+.|.+.... ...-.++..++.+||+.|++|||
T Consensus 58 ~~~-----------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrD 126 (363)
T cd05628 58 ADS-----------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRD 126 (363)
T ss_pred CCC-----------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 443 3322222233445568899999999999886432 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
+||+|||++.+|.++++|||+++.+...
T Consensus 127 lKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 127 IKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred CCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999999999999999876543
No 72
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.79 E-value=2.5e-18 Score=185.47 Aligned_cols=136 Identities=21% Similarity=0.301 Sum_probs=100.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+++.+|+.||+|+.+..... +....+.+|+..++.
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP-------------------------------AIRNQIIRELQVLHE 59 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCH-------------------------------HHHHHHHHHHHHHHH
Confidence 5699999999999999989999999998654221 122344556665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
.+| +++.-..-+.......++||||++|++|.++... ...-.++..++.+||+ .|++|+
T Consensus 60 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~ 128 (333)
T cd06650 60 CNS-----------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 128 (333)
T ss_pred CCC-----------CcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 443 3433333333446678999999999999887532 1122466778999997 589999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||+||+++.+|.++++|||++..+..
T Consensus 129 dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 129 DVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred CCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999999999999999876543
No 73
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.79 E-value=7.7e-19 Score=189.06 Aligned_cols=136 Identities=21% Similarity=0.261 Sum_probs=97.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||+|+.++..... .+....+..|+..+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~E~~~l~~ 51 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-----------------------------DEDIDWVQTEKHVFEQ 51 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-----------------------------hhHHHHHHHHHHHHHh
Confidence 36899999999999999999999999987432110 0111223344443332
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.. +++++.-..-+....+..++||||++|++|.+.... .....++..++.+||+.|++|+|
T Consensus 52 ~~----------~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~D 121 (329)
T cd05618 52 AS----------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 121 (329)
T ss_pred cC----------CCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 21 234433333344556788999999999999765321 12235778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~ 369 (704)
+||+||+++.+|.++++|||++..
T Consensus 122 ikp~Nili~~~~~~kL~DfG~~~~ 145 (329)
T cd05618 122 LKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred CCHHHEEECCCCCEEEeeCCcccc
Confidence 999999999999999999999875
No 74
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.79 E-value=2.2e-18 Score=182.39 Aligned_cols=135 Identities=18% Similarity=0.246 Sum_probs=98.1
Q ss_pred ccccccccceEEEEEEcc----------------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ----------------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVV 258 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~----------------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~iv 258 (704)
+.||+|+||.||+|++.. ++..||||+.+++....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 579999999999998642 34579999988653221
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---------------
Q 005274 259 DEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--------------- 323 (704)
Q Consensus 259 de~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--------------- 323 (704)
....+.+|++.+...+| +++.-..-+....+..+++|||++|++|.++....
T Consensus 62 --~~~~~~~E~~~l~~l~h-----------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (304)
T cd05096 62 --ARNDFLKEVKILSRLKD-----------PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP 128 (304)
T ss_pred --HHHHHHHHHHHHhhcCC-----------CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccccccc
Confidence 11233455554444433 45443333444556789999999999998764210
Q ss_pred -------------hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 324 -------------LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 324 -------------l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.+-.++..++.+||+.|++|+|+||+||+++.+|.++++|||+++.+.
T Consensus 129 ~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~ 189 (304)
T cd05096 129 AHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY 189 (304)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecc
Confidence 123567788999999999999999999999999999999999987653
No 75
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.79 E-value=9e-19 Score=187.81 Aligned_cols=138 Identities=20% Similarity=0.264 Sum_probs=99.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.+..... ..+..+.+.+|+..++.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~i~~~ 57 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-----------------------------AQETVSFFEEERDILSI 57 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhHHHHHHHHHHHHHh
Confidence 5799999999999999999999999998742110 00111223344443332
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.. ++++.-...+.+.....++||||++|++|.++... ...-.++..++.++|+.|++|+
T Consensus 58 ~~-----------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~ 126 (330)
T cd05601 58 SN-----------SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126 (330)
T ss_pred CC-----------CCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 22 23332222234445678999999999999887532 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||.||+++.+|.++++|||++..+..
T Consensus 127 Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 127 DIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred cCchHheEECCCCCEEeccCCCCeECCC
Confidence 9999999999999999999999987643
No 76
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.78 E-value=2.3e-18 Score=184.90 Aligned_cols=245 Identities=18% Similarity=0.201 Sum_probs=146.6
Q ss_pred ccccccccceEEEEEEc---cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR---QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk---~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|+||.||+|+.. .+|+.||||+.++.... . -....+....|+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~-------------------------~~~~~~~~~~e~~~ 57 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV---Q-------------------------KAKTVEHTRTERNV 57 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh---h-------------------------hhhHHHHHHHHHHH
Confidence 57999999999999864 47899999998632100 0 00111233344444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
+...+ +++++.....+.+.....+++|||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 58 l~~l~----------~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 58 LEHVR----------QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred HHhcc----------CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 43332 234444333344556678899999999999776421 12224677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|||+||+|||++.+|+++++|||++..+....... ......+.++++||.-.. ..
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~---------------~~~~~gt~~y~aPE~~~~----------~~ 182 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKER---------------TYSFCGTIEYMAPEIIRG----------KG 182 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCccccccCCCc---------------cccccCCccccCHHHhcC----------CC
Confidence 99999999999999999999999987643221100 000112334444442100 00
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCC---hhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIP---SYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP---~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
..+...|.|++|.++.+++.. ..++... .....+.+.+ ...+|.+ ....++.++
T Consensus 183 ~~~~~~DiwslG~il~elltg--~~pf~~~~~~~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~ 239 (332)
T cd05614 183 GHGKAVDWWSLGILIFELLTG--ASPFTLEGERNTQSEVSRRI-------LKCDPPF--------------PSFIGPEAQ 239 (332)
T ss_pred CCCCccccccchhhhhhhhcC--CCCCCCCCCCCCHHHHHHHH-------hcCCCCC--------------CCCCCHHHH
Confidence 123345667777776666542 2222111 1111111111 1122221 124688999
Q ss_pred HHHHHhhhccccCCC-----CHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
+++++||..||..|+ ++-+.+-|+.+
T Consensus 240 ~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 270 (332)
T cd05614 240 DLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270 (332)
T ss_pred HHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence 999999999999999 55566666654
No 77
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.78 E-value=1.5e-18 Score=186.02 Aligned_cols=232 Identities=21% Similarity=0.163 Sum_probs=142.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.+++... . ++-...+..|...+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~---~--------------------------~~~~~~~~~e~~~l~~ 56 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVII---Q--------------------------DDDVECTMVEKRVLAL 56 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh---h--------------------------hhHHHHHHHHHHHHHh
Confidence 5799999999999999989999999998743210 0 0001122233322222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
..+.+.+.....+.......++||||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 57 ----------~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 126 (324)
T cd05587 57 ----------PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRD 126 (324)
T ss_pred ----------cCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 22223332222233455678999999999999776421 12235778899999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||+|||++.+|.++++|||++......... ......+.++++||.-. ...++
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~ 179 (324)
T cd05587 127 LKLDNVMLDAEGHIKIADFGMCKENIFGGKT----------------TRTFCGTPDYIAPEIIA-----------YQPYG 179 (324)
T ss_pred CCHHHeEEcCCCCEEEeecCcceecCCCCCc----------------eeeecCCccccChhhhc-----------CCCCC
Confidence 9999999999999999999998642111000 00011234555554211 11234
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... +.++.-.... .+.+.+. + ..+. .| ...++++++++++|
T Consensus 180 ~~~DiwslGvil~elltG--~~pf~~~~~~-~~~~~i~--~-----~~~~-------~~-------~~~~~~~~~li~~~ 235 (324)
T cd05587 180 KSVDWWAFGVLLYEMLAG--QPPFDGEDED-ELFQSIM--E-----HNVS-------YP-------KSLSKEAVSICKGL 235 (324)
T ss_pred cccchhhhHHHHHHHHhC--CCCCCCCCHH-HHHHHHH--c-----CCCC-------CC-------CCCCHHHHHHHHHH
Confidence 456778888887776642 2333222111 1111211 0 1111 11 24688999999999
Q ss_pred hhccccCCCCH
Q 005274 506 LYKEGVFRIDR 516 (704)
Q Consensus 506 L~~d~~~R~~r 516 (704)
|.+||..|++.
T Consensus 236 l~~~P~~R~~~ 246 (324)
T cd05587 236 LTKHPAKRLGC 246 (324)
T ss_pred hhcCHHHcCCC
Confidence 99999999975
No 78
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.78 E-value=1.4e-18 Score=186.14 Aligned_cols=232 Identities=20% Similarity=0.172 Sum_probs=142.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.++..... +........|...+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~l-- 54 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-----------------------------DDDVECTMVEKRVL-- 54 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----------------------------hhHHHHHHHHHHHH--
Confidence 56999999999999999899999999987432100 00001111121111
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
....+++.+.....+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 55 --------~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 126 (323)
T cd05616 55 --------ALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRD 126 (323)
T ss_pred --------HhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecC
Confidence 1123344444333344556678899999999999776431 12235778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||+|||++.+|.++++|||++.......... .....+.++++||.-. ...++
T Consensus 127 lkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~----------------~~~~gt~~y~aPE~~~-----------~~~~~ 179 (323)
T cd05616 127 LKLDNVMLDSEGHIKIADFGMCKENMWDGVTT----------------KTFCGTPDYIAPEIIA-----------YQPYG 179 (323)
T ss_pred CCHHHeEECCCCcEEEccCCCceecCCCCCcc----------------ccCCCChhhcCHHHhc-----------CCCCC
Confidence 99999999999999999999987533211000 0001123344443211 12234
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..|+.-.... .+.+.+. ++ .+ ..| ...++++++++++|
T Consensus 180 ~~~DiwSlGvil~elltg--~~Pf~~~~~~-~~~~~i~--~~-----~~-------~~p-------~~~s~~~~~li~~~ 235 (323)
T cd05616 180 KSVDWWAFGVLLYEMLAG--QAPFEGEDED-ELFQSIM--EH-----NV-------AYP-------KSMSKEAVAICKGL 235 (323)
T ss_pred CccchhchhHHHHHHHhC--CCCCCCCCHH-HHHHHHH--hC-----CC-------CCC-------CcCCHHHHHHHHHH
Confidence 456778888877776642 2333222211 1111111 10 11 112 25688999999999
Q ss_pred hhccccCCCCH
Q 005274 506 LYKEGVFRIDR 516 (704)
Q Consensus 506 L~~d~~~R~~r 516 (704)
|.+||..|++.
T Consensus 236 l~~~p~~R~~~ 246 (323)
T cd05616 236 MTKHPGKRLGC 246 (323)
T ss_pred cccCHHhcCCC
Confidence 99999999974
No 79
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.78 E-value=2.1e-18 Score=180.76 Aligned_cols=242 Identities=17% Similarity=0.152 Sum_probs=144.7
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|+||.||+|+.+.+|+.||||+........ ......+..|+..++..+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~~~~~~E~~il~~l~ 51 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK-----------------------------RKGYEGAMVEKRILAKVH 51 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh-----------------------------hHHHHHHHHHHHHHHhCC
Confidence 689999999999999999999999976321000 001122334444443332
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHHHHHHHCCccc
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L~qLh~~G~~H 343 (704)
| +++.....+.+..+..++||||++|++|.+.... ...-.++..++.+||+.|++|
T Consensus 52 ~-----------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 52 S-----------RFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred C-----------CcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2 4444333334455678999999999999754310 112257788899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||.||+++.+|.++++|||++..+....... . ....+.++++|+.-. ...
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----------~------~~~g~~~y~aPE~~~-----------~~~ 173 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT----------K------GYAGTPGFMAPELLQ-----------GEE 173 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCCccc----------c------ccCCCcCccCHHHhc-----------CCC
Confidence 9999999999999999999999987654322100 0 001123344444211 112
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
++...|.|++|.++.++... +.++......... +.. ... .+.+... .....++++++++.
T Consensus 174 ~~~~~DvwslG~il~el~~g--~~pf~~~~~~~~~-~~~--~~~---~~~~~~~------------~~~~~~~~~~~li~ 233 (280)
T cd05608 174 YDFSVDYFALGVTLYEMIAA--RGPFRARGEKVEN-KEL--KQR---ILNDSVT------------YPDKFSPASKSFCE 233 (280)
T ss_pred CCccccHHHHHHHHHHHHhC--CCCCCCCCcchhH-HHH--HHh---hcccCCC------------CcccCCHHHHHHHH
Confidence 23345667777776666542 2222211111000 000 000 0011100 11346889999999
Q ss_pred HhhhccccCCC-----CHHHHHhhhhH
Q 005274 504 ALLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 504 ~lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
+||..||..|+ +.-+.+-|+.+
T Consensus 234 ~~l~~~P~~R~~~~~~~~~~~l~h~~~ 260 (280)
T cd05608 234 ALLAKDPEKRLGFRDGNCDGLRTHPLF 260 (280)
T ss_pred HHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence 99999999998 55666667765
No 80
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.78 E-value=1.2e-19 Score=204.22 Aligned_cols=150 Identities=25% Similarity=0.353 Sum_probs=111.5
Q ss_pred hcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 189 FSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 189 F~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
+.+.-.+-+|.|+||.||+|+.+.||+.||||+.++-... .-.+...+|
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~-------------------------------r~~e~~~~E 61 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL-------------------------------RPRERWCRE 61 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhccc-------------------------------chHHHHHHH
Confidence 4445567899999999999999999999999997752100 112456789
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----hhHH-------HHHHHHHHHH
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----YLIE-------VGVYCSFNQL 336 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----~l~e-------~~v~~~L~qL 336 (704)
++.++..+| .++.+.++-... ..+ .--+...|++||||.|++|....+. .+.+ ..+..++++|
T Consensus 62 ieilkKLnh-~NIVk~f~iee~-~~~---~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~L 136 (732)
T KOG4250|consen 62 IEILKKLNH-PNIVKLFDIEET-KFL---GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHL 136 (732)
T ss_pred HHHHHHcCc-hhhhhhcccCCc-ccc---CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 999999985 677776652221 111 1125567999999999999887542 1222 4566789999
Q ss_pred HHCCccccCCCCCcEEEe--cCCc--EEEEecCCccccChhH
Q 005274 337 LEKGFYHADPHPGNLFRS--YDGK--LAYIDFGMMGEFKEEL 374 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~--~dG~--l~liDFGl~~~l~~~~ 374 (704)
|++||+|||+|||||++- .||+ -|++|||.++.+++..
T Consensus 137 rEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 137 RENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 999999999999999964 5566 5799999999998764
No 81
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.78 E-value=2.5e-18 Score=180.09 Aligned_cols=258 Identities=21% Similarity=0.237 Sum_probs=142.6
Q ss_pred ccccccccceEEEEEEcc-CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+.||+|+||.||+|+... +|+.||||+.+...... .......+|+..++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~------------------------------~~~~~~~~e~~~l~ 56 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE------------------------------GMPLSTIREVAVLR 56 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC------------------------------CchHHHHHHHHHHH
Confidence 569999999999999854 57889999876432110 01112223433332
Q ss_pred HHhhHHHHHHHhcCCccee-eceeee----ecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHH
Q 005274 274 EAKNGLKFRQLYGGIQDVL-IPEMYV----EQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~-vP~v~~----e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh 337 (704)
..+. + .++++. +..++. +..+..+++|||++| .+.+.... ...-.++..++.+||
T Consensus 57 ~l~~-------~-~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH 127 (290)
T cd07862 57 HLET-------F-EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 127 (290)
T ss_pred hhcc-------c-CCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2211 1 123322 111111 223567899999976 56554321 112357788899999
Q ss_pred HCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 338 EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
+.|++|+|+||+|||++.+|.++++|||++......... .....+..+.+|+.-.
T Consensus 128 ~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-----------------~~~~~~~~y~aPE~~~-------- 182 (290)
T cd07862 128 SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-----------------TSVVVTLWYRAPEVLL-------- 182 (290)
T ss_pred HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCccc-----------------ccccccccccChHHHh--------
Confidence 999999999999999999999999999998765432100 0001122333333110
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCc--------cccccchhHHhh
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYK--------VLGSTYPYIARK 489 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~--------i~~~a~P~i~r~ 489 (704)
...++...|.|++|.++.++... ..+|.-......+.+. +++.+.....++. .+....+.....
T Consensus 183 ---~~~~~~~~DiwslG~il~el~~g--~~~f~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (290)
T cd07862 183 ---QSSYATPVDLWSVGCIFAEMFRR--KPLFRGSSDVDQLGKI---LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK 254 (290)
T ss_pred ---CCCCCCccchHHHHHHHHHHHcC--CCCcCCCCHHHHHHHH---HHHhCCCChhhchhhhcccchhccCCCCCCHHH
Confidence 01122234555555555444321 1122211111111111 1111111000100 011111122344
Q ss_pred hccCCChHHHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 490 VLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 490 ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
+..+.++.+++++.+||.+||+.|++..+.|.|+.
T Consensus 255 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 255 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 55678899999999999999999999999998865
No 82
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.78 E-value=2.3e-18 Score=185.16 Aligned_cols=135 Identities=22% Similarity=0.263 Sum_probs=98.1
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+.+.+|+.||||+.++.... .++....+..|...+...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~~~~~ 52 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-----------------------------DDEDIDWVQTEKHVFEQA 52 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhHHHHHHHHHHHHHhh
Confidence 589999999999999999999999998743110 001112233444333322
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+++++.....+.+..+..++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ----------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDl 122 (327)
T cd05617 53 ----------SSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDL 122 (327)
T ss_pred ----------cCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 2234444333344556778999999999999765321 123357778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~ 369 (704)
||+||+++.+|.++++|||++..
T Consensus 123 kp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 123 KLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred CHHHEEEeCCCCEEEecccccee
Confidence 99999999999999999999874
No 83
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.78 E-value=1e-18 Score=187.14 Aligned_cols=240 Identities=15% Similarity=0.138 Sum_probs=141.5
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|++|+||+|+.+.+|+.||||+..+..... ......+..|...+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~~--- 49 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-----------------------------KKEQKHIMAERNVL--- 49 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----------------------------hhHHHHHHHHHHHH---
Confidence 5899999999999999999999999986421000 00011122222111
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+.+ +++++.-...+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 50 ------~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di 122 (323)
T cd05575 50 ------LKNV-KHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122 (323)
T ss_pred ------HhhC-CCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 1111 123333222233455678999999999999765421 122367788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+|||++.+|.++++|||++.......... .....+.++++||.-. ...++.
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~----------------~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (323)
T cd05575 123 KPENILLDSQGHVVLTDFGLCKEGIEHSKTT----------------STFCGTPEYLAPEVLR-----------KQPYDR 175 (323)
T ss_pred CHHHeEECCCCcEEEeccCCCcccccCCCcc----------------ccccCChhhcChhhhc-----------CCCCCc
Confidence 9999999999999999999987532211000 0001123344444211 112334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..+|.-. ....+.+.+. . .... +....++++.+++++||
T Consensus 176 ~~DvwslG~il~ell~g--~~pf~~~-~~~~~~~~i~--~-------~~~~------------~~~~~~~~~~~li~~~l 231 (323)
T cd05575 176 TVDWWCLGAVLYEMLYG--LPPFYSR-DTAEMYDNIL--N-------KPLR------------LKPNISVSARHLLEGLL 231 (323)
T ss_pred cccccccchhhhhhhcC--CCCCCCC-CHHHHHHHHH--c-------CCCC------------CCCCCCHHHHHHHHHHh
Confidence 45667777776665532 1222111 1111111111 0 0111 11346889999999999
Q ss_pred hccccCCCCHH----HHHhhhhH
Q 005274 507 YKEGVFRIDRL----ESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rl----e~Ll~~~~ 525 (704)
.+||..|++.. +.+-|+.+
T Consensus 232 ~~~p~~R~~~~~~~~~il~~~~~ 254 (323)
T cd05575 232 QKDRTKRLGAKDDFLEIKNHVFF 254 (323)
T ss_pred hcCHHhCCCCCCCHHHHHcCCCc
Confidence 99999999863 44445443
No 84
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.78 E-value=7.5e-19 Score=190.13 Aligned_cols=148 Identities=21% Similarity=0.231 Sum_probs=102.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.|-+|+...+|+.||||++...-. .+.....+. ...--.-.+.+.+|+.+++.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~----------------~~~~~~~~~--~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKEL----------------RRQYGFPRQ--PAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhh----------------hhhcccccc--cccccCcHHHHHHHHHHHHh
Confidence 459999999999999999999999999864210 000000000 00000001456788888777
Q ss_pred HhhHHHHHHHhcCCcceeeceeee-ecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV-EQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~-e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
+.| .++.++ -++.. ..++..|||+|||..+.+..... .+.+-.++.++|.|||.+||+||
T Consensus 165 l~H-~nVV~L---------iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHR 234 (576)
T KOG0585|consen 165 LHH-PNVVKL---------IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHR 234 (576)
T ss_pred cCC-cCeeEE---------EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 776 222222 12221 23678899999999888765421 12233677889999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCcccc
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|+||.|+|++.+|++||.|||.+-..
T Consensus 235 DIKPsNLLl~~~g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 235 DIKPSNLLLSSDGTVKISDFGVSNEF 260 (576)
T ss_pred ccchhheEEcCCCcEEeeccceeeec
Confidence 99999999999999999999998765
No 85
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.78 E-value=3.3e-18 Score=178.72 Aligned_cols=261 Identities=18% Similarity=0.187 Sum_probs=145.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.+...... .......+|+..++.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~e~~~l~~ 55 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED------------------------------GLPLSTVREVALLKR 55 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC------------------------------CCchHHHHHHHHHHH
Confidence 46999999999999999999999999876432110 001122334444333
Q ss_pred HhhHHHHHHHhcCCcceeec-eeeee----cccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIP-EMYVE----QTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP-~v~~e----~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~ 338 (704)
.++ + +++++.-. .++.. .....+++|||++| .+.++... ...-.++..++.++|+
T Consensus 56 l~~-------~-~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (288)
T cd07863 56 LEA-------F-DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA 126 (288)
T ss_pred hhh-------c-CCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 321 1 12333221 11111 12346899999986 55544321 1122577788999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG 418 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~ 418 (704)
.|++|+|+||+||+++.+|.++++|||++..+....... ....+..+.+||.-
T Consensus 127 ~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~-----------------~~~~~~~y~aPE~~---------- 179 (288)
T cd07863 127 NCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALT-----------------PVVVTLWYRAPEVL---------- 179 (288)
T ss_pred CCeecCCCCHHHEEECCCCCEEECccCccccccCcccCC-----------------CccccccccCchHh----------
Confidence 999999999999999999999999999987654321100 00012334444421
Q ss_pred HHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhh-hcCCCCc----cccccchhHHhhhccC
Q 005274 419 VFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAI-SSNPNYK----VLGSTYPYIARKVLTD 493 (704)
Q Consensus 419 v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~-~ldP~~~----i~~~a~P~i~r~ll~d 493 (704)
....++...|.|++|.++.++... ..+|.-......+.+.......... ....+.. .+....+-....+..+
T Consensus 180 -~~~~~~~~~DiwslG~~l~~l~~g--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (288)
T cd07863 180 -LQSTYATPVDMWSVGCIFAEMFRR--KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPE 256 (288)
T ss_pred -hCCCCCCcchhhhHHHHHHHHHhC--CcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcC
Confidence 011223344566666666555421 1112111111111111100000000 0000000 0111112223455567
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
.+.++++++.+||.+||..|+++.+.|.|+.
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 257 IEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 7889999999999999999999999888764
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.78 E-value=1.6e-18 Score=187.93 Aligned_cols=237 Identities=16% Similarity=0.121 Sum_probs=145.0
Q ss_pred ccccccccceEEEEEEccCC-cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG-RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG-~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+.||+|+||.||+|+++.++ ..||||+....... ..+....+.+|+..+.
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-----------------------------~~~~~~~~~~E~~~l~ 86 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-----------------------------KQKQVDHVFSERKILN 86 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-----------------------------hhhhHHHHHHHHHHHH
Confidence 67999999999999976554 68999987521100 0011223445555544
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
..+| +++.-..-+....+..++||||++|+.|.+.... .....++..++.+||+.|++||
T Consensus 87 ~l~h-----------p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 155 (340)
T PTZ00426 87 YINH-----------PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYR 155 (340)
T ss_pred hCCC-----------CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 4433 4443333344455678999999999999877532 1223577788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||+|||++.+|.++++|||++..+...... ...+.++++|+.-. ...+
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~-------------------~~gt~~y~aPE~~~-----------~~~~ 205 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAKVVDTRTYT-------------------LCGTPEYIAPEILL-----------NVGH 205 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCeecCCCcce-------------------ecCChhhcCHHHHh-----------CCCC
Confidence 99999999999999999999998865432110 01122334433210 1122
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++... ..||.-..... +.+.+ .++. .. .| ...++++++++++
T Consensus 206 ~~~~DiwSlGvil~ell~G--~~Pf~~~~~~~-~~~~i--~~~~-------~~-----~p-------~~~~~~~~~li~~ 261 (340)
T PTZ00426 206 GKAADWWTLGIFIYEILVG--CPPFYANEPLL-IYQKI--LEGI-------IY-----FP-------KFLDNNCKHLMKK 261 (340)
T ss_pred CccccccchhhHHHHHhcC--CCCCCCCCHHH-HHHHH--hcCC-------CC-----CC-------CCCCHHHHHHHHH
Confidence 3345677777777666542 12222211111 11111 1110 00 11 2457889999999
Q ss_pred hhhccccCCC-----CHHHHHhhhhH
Q 005274 505 LLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 505 lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
||..||..|+ +.-+.+-|+.+
T Consensus 262 ~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 262 LLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred HcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 9999999998 34444445554
No 87
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=6.2e-19 Score=193.90 Aligned_cols=251 Identities=21% Similarity=0.226 Sum_probs=158.9
Q ss_pred CCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHH
Q 005274 182 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEW 261 (704)
Q Consensus 182 G~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~ 261 (704)
..+++.+|..+ .-||.||||-||.|++..|.+.||||.+.-.-+.. . |-
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs----------------------------~-EK 69 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----------------------------N-EK 69 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccccc----------------------------H-HH
Confidence 46788999877 45999999999999999999999999875222211 1 22
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---hh-------HHHHHHH
Q 005274 262 ASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---YL-------IEVGVYC 331 (704)
Q Consensus 262 ~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~l-------~e~~v~~ 331 (704)
...+..|+.|++..+|. +.+--+..+--.+..|||||||-| +-+|+... .+ +-.|+..
T Consensus 70 WqDIlKEVrFL~~l~HP-----------ntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~ 137 (948)
T KOG0577|consen 70 WQDILKEVRFLRQLRHP-----------NTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQ 137 (948)
T ss_pred HHHHHHHHHHHHhccCC-----------CcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 34567888898888873 222112122224567899999976 44554321 22 2256778
Q ss_pred HHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHH
Q 005274 332 SFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEA 411 (704)
Q Consensus 332 ~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~ 411 (704)
+|.|||+++.+|||+|.||||++..|.+|+.|||.+....+... |++ .. -++.|++-
T Consensus 138 gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns--FvG-------TP-----------ywMAPEVI--- 194 (948)
T KOG0577|consen 138 GLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS--FVG-------TP-----------YWMAPEVI--- 194 (948)
T ss_pred HHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhc--ccC-------Cc-----------cccchhHh---
Confidence 89999999999999999999999999999999999887665431 111 00 11111100
Q ss_pred HHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhc
Q 005274 412 VTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVL 491 (704)
Q Consensus 412 i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll 491 (704)
-.+=.+.|+..+|.||+|-.--+|. -+-||.|..- ++..|=-|+..-.|.+. -
T Consensus 195 -----LAMDEGqYdgkvDvWSLGITCIELA-------ERkPPlFnMN--AMSALYHIAQNesPtLq-------------s 247 (948)
T KOG0577|consen 195 -----LAMDEGQYDGKVDVWSLGITCIELA-------ERKPPLFNMN--AMSALYHIAQNESPTLQ-------------S 247 (948)
T ss_pred -----eeccccccCCccceeeccchhhhhh-------hcCCCccCch--HHHHHHHHHhcCCCCCC-------------C
Confidence 0000122333444444432111222 2556666432 23333344444344332 1
Q ss_pred cCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 492 TDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 492 ~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.++|...+..+...|.|-|.-|.+.-+.|-|.+.
T Consensus 248 ~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 248 NEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred chhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 3567788889999999999999999888888753
No 88
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.78 E-value=2.2e-18 Score=184.86 Aligned_cols=232 Identities=19% Similarity=0.172 Sum_probs=141.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||+||+|+.+.+|+.||||+.+..... . ++-.+....|...+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~--------------------------~~~~~~~~~e~~~l~~ 56 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI---Q--------------------------DDDVECTMVEKRVLAL 56 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh---h--------------------------hhHHHHHHHHHHHHHh
Confidence 5799999999999999989999999998632100 0 0001122233333222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
. .+.+.+..-..+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 57 ~----------~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrD 126 (323)
T cd05615 57 Q----------DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRD 126 (323)
T ss_pred c----------cCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 2 2223322222233445678899999999999876432 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||+||+++.+|.++++|||++......... .. ....+.++++||.-. ...++
T Consensus 127 ikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~----------~~------~~~gt~~y~aPE~~~-----------~~~~~ 179 (323)
T cd05615 127 LKLDNVMLDSEGHIKIADFGMCKEHMVDGVT----------TR------TFCGTPDYIAPEIIA-----------YQPYG 179 (323)
T ss_pred CCHHHeEECCCCCEEEeccccccccCCCCcc----------cc------CccCCccccCHHHHc-----------CCCCC
Confidence 9999999999999999999998753221100 00 001134455444211 12234
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..++.-.... .+.+.+. + .. .. +| ...++++++++++|
T Consensus 180 ~~~DiwslGvil~elltG--~~pf~~~~~~-~~~~~i~--~-----~~--~~-----~p-------~~~~~~~~~li~~~ 235 (323)
T cd05615 180 KSVDWWAYGVLLYEMLAG--QPPFDGEDED-ELFQSIM--E-----HN--VS-----YP-------KSLSKEAVSICKGL 235 (323)
T ss_pred CccchhhhHHHHHHHHhC--CCCCCCCCHH-HHHHHHH--h-----CC--CC-----CC-------ccCCHHHHHHHHHH
Confidence 456778888877776642 2233222111 1111111 1 01 11 12 24678999999999
Q ss_pred hhccccCCCCH
Q 005274 506 LYKEGVFRIDR 516 (704)
Q Consensus 506 L~~d~~~R~~r 516 (704)
|.+||..|++.
T Consensus 236 l~~~p~~R~~~ 246 (323)
T cd05615 236 MTKHPSKRLGC 246 (323)
T ss_pred cccCHhhCCCC
Confidence 99999999874
No 89
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=2e-18 Score=176.91 Aligned_cols=166 Identities=17% Similarity=0.259 Sum_probs=118.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|.||.||.+.. ++..||||+.+|..... +.+..++...=-|.+|
T Consensus 37 ~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~-----------------------------~~~~~~f~~g~~~e~E 85 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRT-----------------------------ERFLKSFVKGDYYENL 85 (232)
T ss_pred EEecCCCceEEEEEec--CCCcEEEEEechhcCch-----------------------------HHHHHhhhhhHHHHHH
Confidence 6899999999999765 57789999999764321 1111222222235677
Q ss_pred HhhHHHHHHHhcCCcceeeceeee--------ecccceeEEEEeccCCChhhHHhhh-hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV--------EQTTRKVLIMEWVEGQKLSEVKDLY-LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~--------e~ss~~vLVmE~i~G~~L~d~~~~~-l~e~~v~~~L~qLh~~G~~H~D 345 (704)
++++.++.+ +++..|..+. .+++..+|||||++|.+|.++.... -...++..++.++|+.|++|||
T Consensus 86 a~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi~H~D 160 (232)
T PRK10359 86 IVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGMVSGD 160 (232)
T ss_pred HHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCCccCC
Confidence 777777654 4455555442 2356789999999999998874321 1124677789999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l 403 (704)
|||||++++++| ++++|||.++...++.-... .+..+.|. ...|.|++|+.
T Consensus 161 ikp~Nili~~~g-i~liDfg~~~~~~e~~a~d~-----~vler~y~-~~~di~~lg~~ 211 (232)
T PRK10359 161 PHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKDR-----IDLERHYG-IKNEIKDLGYY 211 (232)
T ss_pred CChHHEEEeCCC-EEEEECCCcccccchhhHHH-----HHHHhHhc-ccccccceeEe
Confidence 999999999999 99999999987754332222 23455555 78999999985
No 90
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=1.4e-18 Score=173.78 Aligned_cols=158 Identities=21% Similarity=0.247 Sum_probs=99.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||+|++|+||+|++. +|+.||||+++++.......| ..+..... +.. .....+...++.++ ..+|
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~~~---------~~~E 69 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRD-RYVSGEFR-FRH-GYCKSNPRKMVRTW---------AEKE 69 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHH-HhhcCCch-hhc-cccCCCHHHHHHHH---------HHHH
Confidence 47999999999999997 999999999998743222111 00000000 000 00112222222222 2346
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH--hh-----hh--HHHHHHHHHHHH-HHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK--DL-----YL--IEVGVYCSFNQL-LEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~--~~-----~l--~e~~v~~~L~qL-h~~G~~H~ 344 (704)
.+++.++.+ +.+..|.++. ....+|||||++|..+.... .. .+ .-.++..++.++ |+.|++||
T Consensus 70 ~~~l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHr 142 (190)
T cd05147 70 MRNLKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHA 142 (190)
T ss_pred HHHHHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 666655543 3444555543 34569999999997654321 11 11 124567889998 69999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
||||+||+++ +|+++++|||++......
T Consensus 143 DlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 143 DLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred CCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 9999999998 589999999999866543
No 91
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.77 E-value=6.3e-18 Score=179.48 Aligned_cols=262 Identities=15% Similarity=0.162 Sum_probs=148.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+++.||||+.+..... .......+|+..++.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 60 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-------------------------------GAPCTAIREVSLLKD 60 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccC-------------------------------CcchhHHHHHHHHHh
Confidence 5799999999999999989999999987643211 001122345544444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++....-+.......++||||+++ .+.+.... ...-.++..++.+||+.|++||
T Consensus 61 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~ 128 (309)
T cd07872 61 LKH-----------ANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHR 128 (309)
T ss_pred CCC-----------CCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 433 3433333344455678999999987 55443211 1223577888999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHH------HHHHHHHHhh-ccChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE------GFIEACLHLV-NRDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~------~~~~~~~~l~-~~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
|+||+||+++.+|.++++|||++......... ......+... .........|+|++|++ +.
T Consensus 129 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i------------l~ 196 (309)
T cd07872 129 DLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCI------------FF 196 (309)
T ss_pred CCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHH------------HH
Confidence 99999999999999999999998754322110 0011112222 12223445666666653 22
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.++.+ ..++...+..+....+...+ +...+..+. .+.........-.|.+.. .++ .......+++
T Consensus 197 el~tg--~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~ 261 (309)
T cd07872 197 EMASG--RPLFPGSTVEDELHLIFRLL---GTPTEETWP----GISSNDEFKNYNFPKYKP----QPL--INHAPRLDTE 261 (309)
T ss_pred HHHhC--CCCCCCCChHHHHHHHHHHh---CCCCHHHHh----hhcchhhhhhhhcCccCC----Cch--hhhccCCCHH
Confidence 22211 01222223222222222211 111111111 100000000000111111 111 1223457889
Q ss_pred HHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 498 LKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
+++++++||..||..|++.-|.|.|+.++
T Consensus 262 ~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 290 (309)
T cd07872 262 GIELLTKFLQYESKKRISAEEAMKHAYFR 290 (309)
T ss_pred HHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence 99999999999999999999999998873
No 92
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.77 E-value=2.5e-18 Score=184.33 Aligned_cols=233 Identities=18% Similarity=0.136 Sum_probs=141.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.++.... . ....+.+.+|...+.-
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~---------------------------~~~~~~l~~e~~~~~~ 55 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII--A---------------------------RDEVESLMCEKRIFET 55 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h---------------------------hhHHHHHHHHHHHHHh
Confidence 5699999999999999989999999998743100 0 0011223333322211
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+ .+ .++++.-..-+.+.....++||||++|++|...... ...-.++..++.+||+.|++|+|+
T Consensus 56 ~~-------~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdl 127 (324)
T cd05589 56 AN-------SE-RHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDL 127 (324)
T ss_pred cc-------cc-CCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCC
Confidence 11 11 234443333344556778999999999998765421 122357778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+||+++.+|.++++|||++......... ......+.++++|+.-. ...++.
T Consensus 128 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~----------------~~~~~g~~~y~aPE~~~-----------~~~~~~ 180 (324)
T cd05589 128 KLDNLLLDTEGFVKIADFGLCKEGMGFGDR----------------TSTFCGTPEFLAPEVLT-----------ETSYTR 180 (324)
T ss_pred CHHHeEECCCCcEEeCcccCCccCCCCCCc----------------ccccccCccccCHhHhc-----------CCCCCc
Confidence 999999999999999999998753221100 00011223455554211 112334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++.. -+.++.-.... .+...+. . ..+. .| ...++++.+++++||
T Consensus 181 ~~DiwslG~il~el~~--G~~pf~~~~~~-~~~~~i~--~-----~~~~-------~p-------~~~~~~~~~li~~~L 236 (324)
T cd05589 181 AVDWWGLGVLIYEMLV--GESPFPGDDEE-EVFDSIV--N-----DEVR-------YP-------RFLSREAISIMRRLL 236 (324)
T ss_pred ccchhhHHHHHHHHHh--CCCCCCCCCHH-HHHHHHH--h-----CCCC-------CC-------CCCCHHHHHHHHHHh
Confidence 4577888877777654 22333322211 1111111 0 0111 11 246888999999999
Q ss_pred hccccCCCC
Q 005274 507 YKEGVFRID 515 (704)
Q Consensus 507 ~~d~~~R~~ 515 (704)
.+||..|++
T Consensus 237 ~~dP~~R~~ 245 (324)
T cd05589 237 RRNPERRLG 245 (324)
T ss_pred hcCHhHcCC
Confidence 999999984
No 93
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.77 E-value=2.4e-18 Score=184.55 Aligned_cols=234 Identities=15% Similarity=0.144 Sum_probs=140.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||+|+....... .-..+.++..|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~~~~~~~~~~e 45 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-----------------------------------KKKEEKHIMSE 45 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-----------------------------------hhhHHHHHHHH
Confidence 3589999999999999989999999998632100 00011111222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
... +.+.+ +++++.-...+.+.....+++|||++|+.|.+.... ...-.++..++.+||+.|++|||
T Consensus 46 ~~~---~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrD 121 (325)
T cd05602 46 RNV---LLKNV-KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRD 121 (325)
T ss_pred HHH---HHHhC-CCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 111 11112 224443333344556678999999999999876432 12335778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||+||+++.+|.++++|||++......... ......+.+|++||.-. ...++
T Consensus 122 lkp~Nili~~~~~~kl~DfG~a~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~ 174 (325)
T cd05602 122 LKPENILLDSQGHIVLTDFGLCKENIEHNGT----------------TSTFCGTPEYLAPEVLH-----------KQPYD 174 (325)
T ss_pred CCHHHeEECCCCCEEEccCCCCcccccCCCC----------------cccccCCccccCHHHHc-----------CCCCC
Confidence 9999999999999999999998753221100 00001233444444210 11233
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..+|.-... ..+.+.+. . .... +..+.++++++++++|
T Consensus 175 ~~~DiwslG~il~el~~g--~~pf~~~~~-~~~~~~i~--~-------~~~~------------~~~~~~~~~~~li~~~ 230 (325)
T cd05602 175 RTVDWWCLGAVLYEMLYG--LPPFYSRNT-AEMYDNIL--N-------KPLQ------------LKPNITNSARHLLEGL 230 (325)
T ss_pred CccccccccHHHHHHhcC--CCCCCCCCH-HHHHHHHH--h-------CCcC------------CCCCCCHHHHHHHHHH
Confidence 446777777777666532 122211111 11111110 0 0000 1235688999999999
Q ss_pred hhccccCCCCHHH
Q 005274 506 LYKEGVFRIDRLE 518 (704)
Q Consensus 506 L~~d~~~R~~rle 518 (704)
|.+||..|++..+
T Consensus 231 l~~~p~~R~~~~~ 243 (325)
T cd05602 231 LQKDRTKRLGAKD 243 (325)
T ss_pred cccCHHHCCCCCC
Confidence 9999999997653
No 94
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.77 E-value=3.7e-18 Score=183.00 Aligned_cols=241 Identities=18% Similarity=0.213 Sum_probs=148.1
Q ss_pred ccccccccceEEEEEEc---cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR---QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk---~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|+||.||+|+.. .+|+.||||+.+.... ..+ ......+..|+..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~---~~~-------------------------~~~~~~~~~E~~i 53 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRN-------------------------QKDTAHTKAERNI 53 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH---Hhh-------------------------hhhHHHHHHHHHH
Confidence 46999999999999863 4789999999863210 000 0111233455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
++..+| ++|.-..-+....+..++||||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 54 l~~l~h-----------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 54 LEAVKH-----------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHhCCC-----------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 554443 3332222234455678999999999999876432 11225677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|+|+||+||+++.+|.++|+|||+++........ . .....+.++++||.-.. .
T Consensus 123 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------~------~~~~gt~~y~aPE~~~~-----------~ 175 (323)
T cd05584 123 YRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV----------T------HTFCGTIEYMAPEILMR-----------S 175 (323)
T ss_pred cCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc----------c------cccCCCccccChhhccC-----------C
Confidence 9999999999999999999999998753221100 0 00112345666653211 1
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
..+...|.|++|.++.++... ..+|.-..... .. +.+. ...+.+ | ...++++++++
T Consensus 176 ~~~~~~DiwslG~il~ell~G--~~pf~~~~~~~-~~------~~~~---~~~~~~-----~-------~~~~~~~~~li 231 (323)
T cd05584 176 GHGKAVDWWSLGALMYDMLTG--APPFTAENRKK-TI------DKIL---KGKLNL-----P-------PYLTPEARDLL 231 (323)
T ss_pred CCCCcceecccHHHHHHHhcC--CCCCCCCCHHH-HH------HHHH---cCCCCC-----C-------CCCCHHHHHHH
Confidence 233456788888888777542 23333222211 11 1111 111111 1 24578999999
Q ss_pred HHhhhccccCCC-----CHHHHHhhhhH
Q 005274 503 VALLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 503 ~~lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
++||.+||..|+ +.-+.+-|+.+
T Consensus 232 ~~~l~~~p~~R~~~~~~~~~~l~~h~~~ 259 (323)
T cd05584 232 KKLLKRNPSSRLGAGPGDAAEVQSHPFF 259 (323)
T ss_pred HHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence 999999999999 45554445543
No 95
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.77 E-value=9.9e-20 Score=183.04 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=148.7
Q ss_pred hhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHH
Q 005274 186 DELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSL 265 (704)
Q Consensus 186 ~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l 265 (704)
++.|+-. +.||.|.|+.||++..+.||+.+|+|++.-+ .|..+-
T Consensus 10 ~d~y~l~--e~igkG~FSvVrRc~~~~tg~~fa~kiin~~----------------------------------k~~~~~ 53 (355)
T KOG0033|consen 10 SDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTK----------------------------------KLSARD 53 (355)
T ss_pred chhhhHH--HHHccCchHHHHHHHhccchHHHHHHHhhhh----------------------------------hhcccc
Confidence 3444434 4599999999999999999999999986421 111111
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH-hhh-hH-------HHHHHHHHHHH
Q 005274 266 FRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK-DLY-LI-------EVGVYCSFNQL 336 (704)
Q Consensus 266 ~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~-~~~-l~-------e~~v~~~L~qL 336 (704)
+++ +-+|++- .+++++ |+|+-..--....+-++||+|+++|+.|..-. .+. .. -.++..++.|.
T Consensus 54 ~e~--l~rEarI----C~~LqH-P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yC 126 (355)
T KOG0033|consen 54 FQK--LEREARI----CRKLQH-PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYC 126 (355)
T ss_pred HHH--HHHHHHH----HHhcCC-CcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2234333 333433 33332222222345688999999999986432 221 11 25677788899
Q ss_pred HHCCccccCCCCCcEEEecC---CcEEEEecCCccccChhHH-HHHHH----HHHHhhccChhHHHHHHHhcCCCCCccc
Q 005274 337 LEKGFYHADPHPGNLFRSYD---GKLAYIDFGMMGEFKEELR-EGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTAE 408 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~d---G~l~liDFGl~~~l~~~~r-~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~d 408 (704)
|.+||+|||+||.|+++... .-+|++|||++.+++.... .++.+ +.+.++.+|.++...|+|+.|++
T Consensus 127 H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGVi----- 201 (355)
T KOG0033|consen 127 HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI----- 201 (355)
T ss_pred HhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHH-----
Confidence 99999999999999998543 3599999999999873321 11111 33445566666666666666553
Q ss_pred hHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHh
Q 005274 409 KEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIAR 488 (704)
Q Consensus 409 ~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r 488 (704)
+.-|+. .-||++..- .--..|+|... .+++-....
T Consensus 202 ----------------------------LfiLL~-------G~~PF~~~~--~~rlye~I~~g---~yd~~~~~w----- 236 (355)
T KOG0033|consen 202 ----------------------------LYILLV-------GYPPFWDED--QHRLYEQIKAG---AYDYPSPEW----- 236 (355)
T ss_pred ----------------------------HHHHHh-------CCCCCCCcc--HHHHHHHHhcc---ccCCCCccc-----
Confidence 222221 112221100 00011222111 222221111
Q ss_pred hhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 489 KVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 489 ~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
...+|++++++++||..||.+||++.|+|-|+-..
T Consensus 237 ---~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 237 ---DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred ---CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 36799999999999999999999999999998763
No 96
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.1e-18 Score=175.24 Aligned_cols=235 Identities=23% Similarity=0.276 Sum_probs=160.1
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+|+|.|-||.||.|+.++++-.||+||.... +| .......++.+|+.+..
T Consensus 27 gr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi--------------------------~~~~v~~qlrREiEIqs 77 (281)
T KOG0580|consen 27 GRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QI--------------------------LKTQVEHQLRREIEIQS 77 (281)
T ss_pred cccccCCccccEeEeeeccCCcEEEEeeeeHH---HH--------------------------HHhcchhhhhheeEeec
Confidence 46999999999999999999999999998632 11 12244567778877766
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.++| +++-+.|+ |.....+.||++||..++.+...... .-.-.++..++.++|..+++
T Consensus 78 ~L~h-pnilrlY~----------~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VI 146 (281)
T KOG0580|consen 78 HLRH-PNILRLYG----------YFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVI 146 (281)
T ss_pred ccCC-ccHHhhhh----------heeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcc
Confidence 6666 34444444 33447788999999998888765431 11225777889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHH----HHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEA----CLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG 418 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~----~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~ 418 (704)
|||+||+|+|++.+|.+++.|||.+..-+...|.++|+. .+.++++....-..|+|++|++
T Consensus 147 hRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl--------------- 211 (281)
T KOG0580|consen 147 HRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVL--------------- 211 (281)
T ss_pred cCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHH---------------
Confidence 999999999999999999999999887766666666552 2334444433344444444432
Q ss_pred HHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHH
Q 005274 419 VFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQL 498 (704)
Q Consensus 419 v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~l 498 (704)
+|++-+..||+-+..-... ...| +.+ ++. .| ...+.++
T Consensus 212 -------------------------~yeflvg~ppFes~~~~et--YkrI-~k~--~~~-----~p-------~~is~~a 249 (281)
T KOG0580|consen 212 -------------------------CYEFLVGLPPFESQSHSET--YKRI-RKV--DLK-----FP-------STISGGA 249 (281)
T ss_pred -------------------------HHHHHhcCCchhhhhhHHH--HHHH-HHc--ccc-----CC-------cccChhH
Confidence 3333445555543331110 0000 001 111 12 3578899
Q ss_pred HHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 499 KSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+|++.++|.++|..|..=-|.+-|...
T Consensus 250 ~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 250 ADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred HHHHHHHhccCccccccHHHHhhhHHH
Confidence 999999999999999988887777653
No 97
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.77 E-value=1e-17 Score=171.58 Aligned_cols=135 Identities=21% Similarity=0.248 Sum_probs=99.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+++.+|+.||+|+.+..... +....+.+|+..++.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 49 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPP-------------------------------DLKAKFLQEARILKQ 49 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCH-------------------------------HHHHHHHHHHHHHHh
Confidence 3689999999999999989999999987643211 222344455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||++|++|.++... ...-.++..++.+||+.|++|+
T Consensus 50 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 118 (252)
T cd05084 50 YSH-----------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHR 118 (252)
T ss_pred CCC-----------CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 433 4433333334445678899999999999877432 1122566778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.++.++++|||++....
T Consensus 119 dl~p~nil~~~~~~~kl~dfg~~~~~~ 145 (252)
T cd05084 119 DLAARNCLVTEKNVLKISDFGMSREEE 145 (252)
T ss_pred ccchheEEEcCCCcEEECccccCcccc
Confidence 999999999999999999999987654
No 98
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.77 E-value=4.4e-18 Score=182.68 Aligned_cols=137 Identities=19% Similarity=0.266 Sum_probs=93.8
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|+||.||+|+.+.+|+.||||+..... +... .+ ......|...+..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~---~~~~-------------------------~~-~~~~~~e~~~l~~-- 49 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKE---IVAK-------------------------KE-VAHTIGERNILVR-- 49 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHH---Hhhh-------------------------hH-HHHHHHHHHHHHH--
Confidence 699999999999999899999999975210 0000 00 0011112111111
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
....+++++.--....+..+..++||||++|++|.+.... ...-.++..++.+||+.|++|+|+|
T Consensus 50 ------~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlk 123 (330)
T cd05586 50 ------TLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLK 123 (330)
T ss_pred ------hccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCC
Confidence 1112344443333344556778999999999998765321 1223577888999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCcccc
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l 370 (704)
|.|||++.+|.++++|||++...
T Consensus 124 p~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 124 PENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred HHHeEECCCCCEEEecCCcCcCC
Confidence 99999999999999999998753
No 99
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.77 E-value=3.4e-18 Score=181.73 Aligned_cols=134 Identities=19% Similarity=0.302 Sum_probs=91.8
Q ss_pred CCccccccccceEEEEEEc--cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 193 SPEPVAAASLGQVYQARLR--QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 193 ~~~PIgsGS~GQVyrA~lk--~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+...||.|+||.||+|+.+ .+++.||||+...... .....+|+.
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----------------------------------~~~~~~E~~ 50 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----------------------------------SMSACREIA 50 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----------------------------------cHHHHHHHH
Confidence 3467999999999999975 3678999998763210 112345666
Q ss_pred HHHHHhhHHHHHHHhcCCccee-eceeeee-cccceeEEEEeccCCChhhHHh------------------hhhHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVL-IPEMYVE-QTTRKVLIMEWVEGQKLSEVKD------------------LYLIEVGVY 330 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~e-~ss~~vLVmE~i~G~~L~d~~~------------------~~l~e~~v~ 330 (704)
+++..+| +++. +...+.. .....+++|||+++ .+.++.. ....-.++.
T Consensus 51 ~l~~l~h-----------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 118 (317)
T cd07868 51 LLRELKH-----------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 118 (317)
T ss_pred HHHhcCC-----------CCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHH
Confidence 6665554 3322 2222222 23346799999966 5544321 012236778
Q ss_pred HHHHHHHHCCccccCCCCCcEEE----ecCCcEEEEecCCccccCh
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFR----SYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv----~~dG~l~liDFGl~~~l~~ 372 (704)
.++.+||+.|++|+|+||+|||+ +.+|.++++|||++..+..
T Consensus 119 ~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07868 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred HHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCC
Confidence 89999999999999999999999 4568899999999976543
No 100
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.77 E-value=4.4e-18 Score=181.75 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=96.1
Q ss_pred ccccccccceEEEEEE---ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARL---RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~l---k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|+||.||+++. +.+|+.||||+.+..... ..-......|+..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~------------------------------~~~~~~~~~E~~~ 51 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK------------------------------VRDRVRTKMERDI 51 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh------------------------------hhhHHHHHHHHHH
Confidence 4699999999999986 357899999998632100 0001123344444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
+...+| ++|.-...+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 52 l~~l~h-----------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 120 (318)
T cd05582 52 LAEVNH-----------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 120 (318)
T ss_pred HHhCCC-----------CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 433332 4433333344456678999999999998776432 12235777889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|+||.||+++.+|.++++|||++....
T Consensus 121 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 121 YRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred cCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 99999999999999999999999987653
No 101
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.77 E-value=2.8e-18 Score=183.49 Aligned_cols=231 Identities=17% Similarity=0.158 Sum_probs=137.4
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH-HHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD-YKIE 274 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld-~l~E 274 (704)
.||.|+||+||+|+.+.+|+.||||+....... . ......+..|.. +++.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~---~--------------------------~~~~~~~~~e~~~~l~~ 52 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL---K--------------------------KKEQNHIMAERNVLLKN 52 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH---H--------------------------hhHHHHHHHHHHHHHHh
Confidence 589999999999999989999999998632100 0 001112222222 1111
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
. +++++.-...+.+.....++||||++|+.|.+.... ...-.++..++.+||+.|++|+|
T Consensus 53 ~-----------~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~D 121 (321)
T cd05603 53 L-----------KHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRD 121 (321)
T ss_pred C-----------CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 1 123433222234455678999999999998765321 12235778889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||+||+++.+|+++++|||++.......... .....+.++++||.-. ...++
T Consensus 122 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~----------------~~~~gt~~y~aPE~~~-----------~~~~~ 174 (321)
T cd05603 122 LKPENILLDSQGHVVLTDFGLCKEGVEPEETT----------------STFCGTPEYLAPEVLR-----------KEPYD 174 (321)
T ss_pred CCHHHeEECCCCCEEEccCCCCccCCCCCCcc----------------ccccCCcccCCHHHhc-----------CCCCC
Confidence 99999999999999999999987532111000 0001223444444211 11233
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..+|.-. ....+. +.+... | .. +-...+.++.+++.+|
T Consensus 175 ~~~DiwslG~il~el~~g--~~pf~~~-~~~~~~------~~i~~~--~-~~------------~~~~~~~~~~~li~~~ 230 (321)
T cd05603 175 RTVDWWCLGAVLYEMLYG--LPPFYSR-DVSQMY------DNILHK--P-LQ------------LPGGKTVAACDLLVGL 230 (321)
T ss_pred CcCcccccchhhhhhhcC--CCCCCCC-CHHHHH------HHHhcC--C-CC------------CCCCCCHHHHHHHHHH
Confidence 445677777777666432 1122111 111111 111100 0 00 1135678899999999
Q ss_pred hhccccCCCCHH
Q 005274 506 LYKEGVFRIDRL 517 (704)
Q Consensus 506 L~~d~~~R~~rl 517 (704)
|.+||..|++..
T Consensus 231 l~~~p~~R~~~~ 242 (321)
T cd05603 231 LHKDQRRRLGAK 242 (321)
T ss_pred ccCCHhhcCCCC
Confidence 999999998753
No 102
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.76 E-value=3.3e-18 Score=187.47 Aligned_cols=249 Identities=18% Similarity=0.162 Sum_probs=150.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+....... -......+.+|+..++.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~il~~ 99 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-----------------------------KRSDSAFFWEERDIMAH 99 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhhHHHHHHHHHHHHh
Confidence 5799999999999999999999999998631000 00011223344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| +++.-...+.+.....++||||++|++|.++... ...-.++..++.+||+.|++|+|+
T Consensus 100 ~~h-----------~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDL 168 (370)
T cd05596 100 ANS-----------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDV 168 (370)
T ss_pred CCC-----------CCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 332 3433222344556678999999999999887432 122357788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.|||++.+|.++++|||++..+....... .. ....+..+++|+.-... -....++.
T Consensus 169 kp~NILl~~~~~~kL~DfG~~~~~~~~~~~~----------~~-----~~~gt~~y~aPE~~~~~-------~~~~~~~~ 226 (370)
T cd05596 169 KPDNMLLDKSGHLKLADFGTCMKMDANGMVR----------CD-----TAVGTPDYISPEVLKSQ-------GGDGYYGR 226 (370)
T ss_pred CHHHEEEcCCCCEEEEeccceeeccCCCccc----------CC-----CCCCCcCeECHHHhccC-------CCCCCCCC
Confidence 9999999999999999999987654321100 00 00112334444421100 00011334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..||.-.... .....+. .+ .+.+.+ |- -...|++++++++.||
T Consensus 227 ~~DiwSlGvilyelltG--~~Pf~~~~~~-~~~~~i~--~~-----~~~~~~-----~~-----~~~~s~~~~~li~~~L 286 (370)
T cd05596 227 ECDWWSVGVFLYEMLVG--DTPFYADSLV-GTYSKIM--DH-----KNSLTF-----PD-----DIEISKQAKDLICAFL 286 (370)
T ss_pred ceeeeehhHHHHHHHhC--CCCcCCCCHH-HHHHHHH--cC-----CCcCCC-----CC-----cCCCCHHHHHHHHHHc
Confidence 56778888887777642 2222211111 1111110 10 011111 10 0146889999999999
Q ss_pred hccccC--CCCHHHHHhhhhH
Q 005274 507 YKEGVF--RIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~--R~~rle~Ll~~~~ 525 (704)
..+|.. |++..+.+-|+.+
T Consensus 287 ~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 287 TDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred cChhhccCCCCHHHHhcCccc
Confidence 988876 8888888888765
No 103
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.76 E-value=1.4e-17 Score=186.87 Aligned_cols=265 Identities=18% Similarity=0.223 Sum_probs=148.4
Q ss_pred HHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHH
Q 005274 177 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQA 256 (704)
Q Consensus 177 ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ 256 (704)
+..+.+.....-|... +.||+|+||.||+|+...+|+.||||+...+.
T Consensus 56 ~~~~~~~~~~~~y~~~--~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------------------------------ 103 (440)
T PTZ00036 56 IDNDINRSPNKSYKLG--NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------------------------------ 103 (440)
T ss_pred hhhhhccCcCCeEEEe--EEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------------------------------
Confidence 3444433333334433 57999999999999998899999999875321
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCccee-eceeeee-----c--ccceeEEEEeccCCChhhHHh-------
Q 005274 257 VVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVL-IPEMYVE-----Q--TTRKVLIMEWVEGQKLSEVKD------- 321 (704)
Q Consensus 257 ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~e-----~--ss~~vLVmE~i~G~~L~d~~~------- 321 (704)
....+|+..++..+| +++. +...+.. . ....++||||++|. +.+...
T Consensus 104 ------~~~~~Ei~il~~l~h-----------~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~ 165 (440)
T PTZ00036 104 ------QYKNRELLIMKNLNH-----------INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNH 165 (440)
T ss_pred ------chHHHHHHHHHhcCC-----------CCCcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCC
Confidence 011246665555544 2221 1111111 1 11246899999874 433321
Q ss_pred ------hhhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCC-cEEEEecCCccccChhHHH-HHH----HHHHHhh-cc
Q 005274 322 ------LYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG-KLAYIDFGMMGEFKEELRE-GFI----EACLHLV-NR 388 (704)
Q Consensus 322 ------~~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG-~l~liDFGl~~~l~~~~r~-~~~----~~~~~l~-~~ 388 (704)
......++..+|.+||+.|++|||+||+|||++.++ .++|+|||+++.+...... .+. ...+.++ ..
T Consensus 166 ~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~ 245 (440)
T PTZ00036 166 ALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGA 245 (440)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCC
Confidence 012235778899999999999999999999998765 6999999999866432211 000 1112222 11
Q ss_pred ChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCC---hhHHHHHHHHHh-
Q 005274 389 DFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIP---SYFSLVIRSLAV- 464 (704)
Q Consensus 389 d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP---~~~~liiRsl~~- 464 (704)
..+....|+|++|+ ++.++.... .+|.-. ..+..+++.+..
T Consensus 246 ~~~~~~~DiwSlGv---------------------------------il~elltG~--~pf~~~~~~~~~~~i~~~~~~p 290 (440)
T PTZ00036 246 TNYTTHIDLWSLGC---------------------------------IIAEMILGY--PIFSGQSSVDQLVRIIQVLGTP 290 (440)
T ss_pred CCCCcHHHHHHHHH---------------------------------HHHHHHhCC--CCCCCCChHHHHHHHHHHhCCC
Confidence 22334445555554 333332210 111100 111122221111
Q ss_pred hhhhhhhcCCCCccc--cccchhHHhhhc-cCCChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 465 LEGIAISSNPNYKVL--GSTYPYIARKVL-TDSSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 465 lEGi~~~ldP~~~i~--~~a~P~i~r~ll-~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
.+......+|++.-+ ....|.-.+..+ ...++++++++++||.+||..|+++.+.|.|+.|.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~ 355 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD 355 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence 011112233443211 111122222222 34678999999999999999999999999999874
No 104
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.76 E-value=2.1e-17 Score=176.92 Aligned_cols=134 Identities=21% Similarity=0.298 Sum_probs=93.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+...... .-...+.+|+..++.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~E~~~l~~ 55 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV------------------------------SDATRILREIKLLRL 55 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc------------------------------hhHHHHHHHHHHHHh
Confidence 57999999999999999899999999876321100 001234455555554
Q ss_pred HhhHHHHHHHhcCCccee-eceeeee----cccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCC
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYVE----QTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~e----~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G 340 (704)
.+| +++. +..++.. .....++||||++| .|.+.... ...-.++..++.+||+.|
T Consensus 56 l~h-----------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 56 LRH-----------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred CCC-----------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 443 3322 1122211 11246899999964 66655321 122357788999999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
++|+|+||.|||++.+|.++++|||++...
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 999999999999999999999999998764
No 105
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.76 E-value=4.2e-18 Score=182.59 Aligned_cols=135 Identities=17% Similarity=0.222 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||+||+|+.+.+|+.||||+.++..... ......+..|...+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~~--- 49 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-----------------------------RKEQKHIMAERNVL--- 49 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----------------------------hhHHHHHHHHHHHH---
Confidence 5899999999999999999999999986421100 00111222222211
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+.. +++++.-...+.+.....+++|||++|+.|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 50 ------l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 50 ------LKNV-KHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred ------HHhC-CCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 1111 224433222344556778999999999998765321 122357788899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~ 369 (704)
||+|||++.+|.++++|||++..
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~ 145 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKE 145 (325)
T ss_pred CHHHeEECCCCCEEEeecCCccc
Confidence 99999999999999999999875
No 106
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.76 E-value=4.4e-18 Score=178.78 Aligned_cols=243 Identities=16% Similarity=0.143 Sum_probs=146.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|....+|+.||||+........ .+....+.+|+..++.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~~~~~~E~~~l~~ 56 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----------------------------RKGEAMALNEKQILEK 56 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh-----------------------------hhhHHHHHHHHHHHHh
Confidence 46999999999999998899999999976421100 0111223344444433
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.............++||||++|++|.+.... ...-.++..++.+||+.|++|
T Consensus 57 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (285)
T cd05605 57 VNS-----------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVY 125 (285)
T ss_pred cCC-----------CCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEe
Confidence 332 3433222233344578999999999999765321 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|++|.||+++.+|.++++|||++..+...... .....+.++++|+.-. ...
T Consensus 126 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-----------------~~~~~~~~y~aPE~~~-----------~~~ 177 (285)
T cd05605 126 RDLKPENILLDDYGHIRISDLGLAVEIPEGETI-----------------RGRVGTVGYMAPEVVK-----------NER 177 (285)
T ss_pred cCCCHHHEEECCCCCEEEeeCCCceecCCCCcc-----------------ccccCCCCccCcHHhc-----------CCC
Confidence 999999999999999999999998765422110 0011234444444210 111
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
++...|.|++|.++.++... ..++.-..... ....+ .+.+ ....+. .....++.++++++
T Consensus 178 ~~~~~Diws~G~~l~el~~g--~~pf~~~~~~~-~~~~~--~~~~-~~~~~~--------------~~~~~~~~~~~li~ 237 (285)
T cd05605 178 YTFSPDWWGLGCLIYEMIEG--KSPFRQRKEKV-KREEV--ERRV-KEDQEE--------------YSEKFSEAARSICR 237 (285)
T ss_pred CCccccchhHHHHHHHHHHC--CCCCCCCchhh-HHHHH--HHHh-hhcccc--------------cCcccCHHHHHHHH
Confidence 23345667777777666542 22222111100 00000 0101 000111 11246788999999
Q ss_pred HhhhccccCCC-----CHHHHHhhhhH
Q 005274 504 ALLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 504 ~lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
+|+..||..|+ ++-+.+.|+.+
T Consensus 238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05605 238 QLLTKDPGFRLGCRGEGAEEVKAHPFF 264 (285)
T ss_pred HHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence 99999999999 66666667665
No 107
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.76 E-value=1.4e-17 Score=179.34 Aligned_cols=251 Identities=14% Similarity=0.141 Sum_probs=148.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.++.-. . -......+.+|.+.+..
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~---------------------------~~~~~~~~~~e~~~l~~ 57 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--L---------------------------KRAETACFREERDVLVN 57 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--h---------------------------hhhhHHHHHHHHHHHHh
Confidence 579999999999999998999999999863100 0 00111233445554443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.......+.....++||||++|++|.++... ...-.++..++.+||+.|++|+
T Consensus 58 ~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (331)
T cd05597 58 GDR-----------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHR 126 (331)
T ss_pred CCC-----------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEC
Confidence 322 3332222233445678999999999999887532 1222567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||+|||++.+|.++++|||++..+....... ......+.++++|+.-.... . -...+
T Consensus 127 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~---------------~~~~~gt~~y~aPE~~~~~~-----~-~~~~~ 185 (331)
T cd05597 127 DIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ---------------SNVAVGTPDYISPEILQAME-----D-GKGRY 185 (331)
T ss_pred CCCHHHEEECCCCCEEEEECCceeecCCCCCcc---------------ccceeccccccCHHHHhhcc-----c-cccCC
Confidence 999999999999999999999987654321100 00012344555555311000 0 00123
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++... +.||.-.. .......+. . ....+.+ | ......++++++++++
T Consensus 186 ~~~~DiwslG~~l~el~~g--~~Pf~~~~-~~~~~~~i~------~-~~~~~~~-----~----~~~~~~~~~~~~li~~ 246 (331)
T cd05597 186 GPECDWWSLGVCMYEMLYG--ETPFYAES-LVETYGKIM------N-HKEHFQF-----P----PDVTDVSEEAKDLIRR 246 (331)
T ss_pred CCcceeehhhhHHHHHhhC--CCCCCCCC-HHHHHHHHH------c-CCCcccC-----C----CccCCCCHHHHHHHHH
Confidence 3456788888887776642 22322111 111111111 0 0111111 0 0112368899999999
Q ss_pred hhhcccc--CCCCHHHHHhhhhH
Q 005274 505 LLYKEGV--FRIDRLESLLTESL 525 (704)
Q Consensus 505 lL~~d~~--~R~~rle~Ll~~~~ 525 (704)
||..++. -|++..+.|.|+.+
T Consensus 247 ll~~~~~r~~r~~~~~~l~hp~~ 269 (331)
T cd05597 247 LICSPETRLGRNGLQDFKDHPFF 269 (331)
T ss_pred HccCcccccCCCCHHHHhcCCCC
Confidence 9975433 36777777778765
No 108
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.76 E-value=7e-18 Score=180.48 Aligned_cols=135 Identities=23% Similarity=0.272 Sum_probs=95.1
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||.|+||.||+|+++.+|+.||||+.+...... .+.......|...+...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~e~~il~~~ 52 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-----------------------------DDDVECTMTEKRVLALA 52 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----------------------------hhHHHHHHHHHHHHHhc
Confidence 4899999999999999899999999987421100 00111222333322222
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+++++.-...+.+.....++||||++|++|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 53 ----------~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dl 122 (318)
T cd05570 53 ----------GKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDL 122 (318)
T ss_pred ----------cCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCC
Confidence 1234433222234456678999999999998765421 122356778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~ 369 (704)
||.||+++.+|.++++|||+++.
T Consensus 123 kp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 123 KLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred CHHHeEECCCCcEEecccCCCee
Confidence 99999999999999999999864
No 109
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.76 E-value=8.2e-18 Score=180.10 Aligned_cols=240 Identities=20% Similarity=0.189 Sum_probs=145.0
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+++.+|+.||||+.++.... .+........|...+...
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~~ 52 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL-----------------------------MDDDVECTMVEKRVLSLA 52 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hcchHHHHHHHHHHHHhc
Confidence 589999999999999989999999998753210 000111222232222211
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+++++.-...+.......++||||++|++|.+.... .....++..++.+||+.|++|+|+
T Consensus 53 ----------~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi 122 (316)
T cd05619 53 ----------WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL 122 (316)
T ss_pred ----------cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 2234433223334455678899999999999876432 122357778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||.||+++.+|.++++|||++......... ......+.++++|+.-. ...++.
T Consensus 123 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------~~~~~gt~~y~aPE~~~-----------~~~~~~ 175 (316)
T cd05619 123 KLDNILLDTDGHIKIADFGMCKENMLGDAK----------------TCTFCGTPDYIAPEILL-----------GQKYNT 175 (316)
T ss_pred CHHHEEECCCCCEEEccCCcceECCCCCCc----------------eeeecCCccccCHHHHc-----------CCCCCc
Confidence 999999999999999999998743211000 00001123444444211 112334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..|+.-.. ...+.+.+. ...|. .| ...+.++++++.+||
T Consensus 176 ~~DvwslG~il~el~~G--~~pf~~~~-~~~~~~~i~-------~~~~~-------~~-------~~~~~~~~~li~~~l 231 (316)
T cd05619 176 SVDWWSFGVLLYEMLIG--QSPFHGHD-EEELFQSIR-------MDNPC-------YP-------RWLTREAKDILVKLF 231 (316)
T ss_pred hhhhhhHHHHHHHHHhC--CCCCCCCC-HHHHHHHHH-------hCCCC-------CC-------ccCCHHHHHHHHHHh
Confidence 45677777777666542 22332211 111111111 11111 11 135788999999999
Q ss_pred hccccCCCCHHHHH-hhhhH
Q 005274 507 YKEGVFRIDRLESL-LTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~L-l~~~~ 525 (704)
.+||..|++..+.+ .|+.+
T Consensus 232 ~~~P~~R~~~~~~l~~h~~~ 251 (316)
T cd05619 232 VREPERRLGVKGDIRQHPFF 251 (316)
T ss_pred ccCHhhcCCChHHHHcCccc
Confidence 99999999886444 45554
No 110
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.76 E-value=8.9e-18 Score=175.72 Aligned_cols=242 Identities=15% Similarity=0.111 Sum_probs=144.5
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|+||+||+++.+.+|+.||+|+........ ..-......|++++++.+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----------------------------~~~~~~~~~E~~il~~l~ 51 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----------------------------KSGEKMALLEKEILEKVN 51 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----------------------------chhhHHHHHHHHHHHhcC
Confidence 689999999999999899999999875321000 000112234555555443
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccccC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
| +++.-...+.+.....+++|||++|++|.+.... ...-.++..++.++|+.|++|+|
T Consensus 52 h-----------p~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 52 S-----------PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred C-----------CcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 3 4443333334455678999999999999765321 11225777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||.||+++.++.++++|||++..+....... ....+.++++|+.-. ...++
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~-----------------~~~~~~~y~aPE~~~-----------~~~~~ 172 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGKTIT-----------------QRAGTNGYMAPEILK-----------EEPYS 172 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCceee-----------------ccCCCCCccCHHHHc-----------cCCCC
Confidence 99999999999999999999987654321100 001123344443210 11133
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++.... .++.-...-.. ...+.. ..+..+... .....+++++++++.|
T Consensus 173 ~~~DvwslGv~l~el~~g~--~p~~~~~~~~~---~~~~~~---~~~~~~~~~-----------~~~~~~~~~~~li~~~ 233 (277)
T cd05607 173 YPVDWFAMGCSIYEMVAGR--TPFKDHKEKVA---KEELKR---RTLEDEVKF-----------EHQNFTEESKDICRLF 233 (277)
T ss_pred CchhHHHHHHHHHHHHhCC--CCCCCCcchhh---HHHHHH---Hhhcccccc-----------ccccCCHHHHHHHHHH
Confidence 3456667776666655421 22211000000 000001 111111111 0124688999999999
Q ss_pred hhccccCCCCH----HHHHhhhhH
Q 005274 506 LYKEGVFRIDR----LESLLTESL 525 (704)
Q Consensus 506 L~~d~~~R~~r----le~Ll~~~~ 525 (704)
|.+||..|++. .+-+.|+.+
T Consensus 234 L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 234 LAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred hccCHhhCCCCccchhhhhcChhh
Confidence 99999999998 344456665
No 111
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=3.5e-18 Score=173.95 Aligned_cols=263 Identities=20% Similarity=0.277 Sum_probs=147.2
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
..|||-|.||.||..++.++|+.||.|.. |++-..+..- +++++|+..+.
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~-pnvfq~L~s~-----------------------------krvFre~kmLc 107 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKM-PNVFQNLASC-----------------------------KRVFREIKMLS 107 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhc-chHHHHHHHH-----------------------------HHHHHHHHHHH
Confidence 46999999999999999999999999975 4444333222 22333333322
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhH---------HhhhhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEV---------KDLYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~---------~~~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
--+|- +.-..+. |.-|. ..++-...|.++|.+.. +|..+ ...+..-.++..+|+|||+.||.||
T Consensus 108 fFkHd-NVLSaLD----ILQPp-h~dfFqEiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHR 180 (449)
T KOG0664|consen 108 SFRHD-NVLSLLD----ILQPA-NPSFFQELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHR 180 (449)
T ss_pred hhccc-cHHHHHH----hcCCC-CchHHHHHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhc
Confidence 22220 1000000 00000 00111122222222211 11111 1113344788999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||||+|++.++-+||||||+++..+.+.+..+..-+ +. .||...+.+ +|. +.|
T Consensus 181 DIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEV---VT-QYYRAPEiL--MGa-------------------RhY 235 (449)
T KOG0664|consen 181 DIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEV---VT-QYYRAPELL--MGA-------------------RRY 235 (449)
T ss_pred cCCCccEEeccCceEEecccccccccchhhhhhhHHHH---HH-HHhccHHHh--hcc-------------------hhh
Confidence 99999999999999999999999988777665553322 21 222222211 111 234
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCC-hhHHHHHHHHHh--hhhhhhh-------------cCCCCcccc-ccchhHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIP-SYFSLVIRSLAV--LEGIAIS-------------SNPNYKVLG-STYPYIA 487 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP-~~~~liiRsl~~--lEGi~~~-------------ldP~~~i~~-~a~P~i~ 487 (704)
+..++.||+|+|+.+++.--.-+.-.-| ..+.+|+--+++ +|.+-.. -.|++.++- .+.|
T Consensus 236 s~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~--- 312 (449)
T KOG0664|consen 236 TGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASP--- 312 (449)
T ss_pred cCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCC---
Confidence 5556777777777776643222222333 233344333333 2222110 123333211 0111
Q ss_pred hhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 488 RKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 488 r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+..-+..+++..||..||.+|++.-+++-|.++
T Consensus 313 ----~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 313 ----DDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred ----cccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 1334568889999999999999999999999875
No 112
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.76 E-value=1.8e-18 Score=172.57 Aligned_cols=258 Identities=18% Similarity=0.257 Sum_probs=160.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..+|.|-++.|+.|....+++.++||+.+|--.+.|.++++||+.+
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL---------------------------------- 89 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNL---------------------------------- 89 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhc----------------------------------
Confidence 4699999999999998889999999999986655555555554433
Q ss_pred HhhHHHHHHHhcCCcceeeceeee-ecccceeEEEEeccCCChhhHHh------hhhHHHHHHHHHHHHHHCCccccCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV-EQTTRKVLIMEWVEGQKLSEVKD------LYLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~-e~ss~~vLVmE~i~G~~L~d~~~------~~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
....++.+++. +.. ..+...-|++||+++.+...+-. .+..-.++..+|.++|+.||+|||.|
T Consensus 90 -~gg~NIi~L~D---------iV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVK 159 (338)
T KOG0668|consen 90 -RGGPNIIKLLD---------IVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVK 159 (338)
T ss_pred -cCCCCeeehhh---------hhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCC
Confidence 21112222211 111 11334458999999877655422 23344677788999999999999999
Q ss_pred CCcEEEecC-CcEEEEecCCccccChhHHHHHHHHH------HHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHH
Q 005274 348 PGNLFRSYD-GKLAYIDFGMMGEFKEELREGFIEAC------LHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVF 420 (704)
Q Consensus 348 PgNILv~~d-G~l~liDFGl~~~l~~~~r~~~~~~~------~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~ 420 (704)
|.|++++.. .++.++|||++....+...++..-+. .-++.-..+...-|+|++||+ +++++
T Consensus 160 PhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcm------------lA~mi 227 (338)
T KOG0668|consen 160 PHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM------------LASMI 227 (338)
T ss_pred cceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHH------------HHHHH
Confidence 999999865 57999999999877665433221111 113333444556677777764 22222
Q ss_pred H--HHhhccCCccC----HHhH--HHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 421 Q--NAVAKGVRNIS----FGDL--LGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 421 ~--~~~~~~~~~~s----~~~i--~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
- ..+..|-++.+ +..+ ++++..-+.+|.+.++|.|..++... ..+||- ++..
T Consensus 228 FrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~------------------~rk~w~--~Fi~ 287 (338)
T KOG0668|consen 228 FRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH------------------SRKPWS--RFIN 287 (338)
T ss_pred hccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc------------------ccccHH--HhCC
Confidence 1 11222222221 1111 12344444555555555554433221 122321 1111
Q ss_pred -----CCChHHHHHHHHhhhccccCCCCHHHHHhhhhHHHH
Q 005274 493 -----DSSPQLKSSLVALLYKEGVFRIDRLESLLTESLRAR 528 (704)
Q Consensus 493 -----d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~~~ 528 (704)
-.+|++.|+|.++|.+|.+-|.++-|++-|++|...
T Consensus 288 ~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 288 SENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred ccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 147999999999999999999999999999998443
No 113
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.76 E-value=9.2e-18 Score=176.34 Aligned_cols=243 Identities=16% Similarity=0.125 Sum_probs=146.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+...+|+.||||+..+..... +.....+.+|++.++.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~E~~il~~ 56 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-----------------------------RKGESMALNEKQILEK 56 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-----------------------------hhHHHHHHHHHHHHHH
Confidence 56999999999999999999999999976431100 0111223344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++..........+..+++|||++|+.|.+.... ...-.++..++.+||+.|++|
T Consensus 57 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH 125 (285)
T cd05632 57 VNS-----------QFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVY 125 (285)
T ss_pred cCC-----------cCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 332 3333222233445678899999999998765321 112257778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||+||+++.++.++++|||++.......... ....+.++.+|+.-. ...
T Consensus 126 ~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------------~~~g~~~~~aPE~~~-----------~~~ 177 (285)
T cd05632 126 RDLKPENILLDDYGHIRISDLGLAVKIPEGESIR-----------------GRVGTVGYMAPEVLN-----------NQR 177 (285)
T ss_pred cCCCHHHEEECCCCCEEEecCCcceecCCCCccc-----------------CCCCCcCccChHHhc-----------CCC
Confidence 9999999999999999999999887654221100 001224444444210 111
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhh-hhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIA-ISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~-~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
++...|.|++|.++.++... ..|+.-....... +.+. ....+... .....++++.+++
T Consensus 178 ~~~~~Di~slG~~l~~l~~g--~~P~~~~~~~~~~-------~~~~~~~~~~~~~------------~~~~~~~~~~~li 236 (285)
T cd05632 178 YTLSPDYWGLGCLIYEMIEG--QSPFRGRKEKVKR-------EEVDRRVLETEEV------------YSAKFSEEAKSIC 236 (285)
T ss_pred CCcccchHHHHHHHHHHHhC--CCCCCCCCHHHHH-------HHHHHhhhccccc------------cCccCCHHHHHHH
Confidence 23334667777776666542 2233211111000 0000 00111111 1134678899999
Q ss_pred HHhhhccccCCCC-----HHHHHhhhhHH
Q 005274 503 VALLYKEGVFRID-----RLESLLTESLR 526 (704)
Q Consensus 503 ~~lL~~d~~~R~~-----rle~Ll~~~~~ 526 (704)
..+|..||..|++ +-+-+.|..++
T Consensus 237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~ 265 (285)
T cd05632 237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265 (285)
T ss_pred HHHccCCHhHcCCCcccChHHHHcChhhh
Confidence 9999999999998 55666676663
No 114
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.75 E-value=5.1e-18 Score=176.78 Aligned_cols=135 Identities=23% Similarity=0.340 Sum_probs=95.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+..... +.....+.+|+..+..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE------------------------------EGVPSTAIREISLLKE 55 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEecccccc------------------------------CCchHHHHHHHHHHHh
Confidence 5799999999999999889999999997632111 0111233455555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-----h-------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-----L-------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-----~-------~l~e~~v~~~L~qLh~~G~~ 342 (704)
..| +++.-..-+.......++||||++| .+.+... . ...-.++..+|.+||+.|++
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 56 LQH-----------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred cCC-----------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 443 3333322233445678999999986 5544421 1 11235677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|+||.||+++.+|.++++|||++....
T Consensus 124 H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 152 (285)
T cd07861 124 HRDLKPQNLLIDNKGVIKLADFGLARAFG 152 (285)
T ss_pred ecCCCHHHEEEcCCCcEEECcccceeecC
Confidence 99999999999999999999999987654
No 115
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.75 E-value=1.4e-17 Score=175.03 Aligned_cols=241 Identities=17% Similarity=0.159 Sum_probs=146.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||+||+|..+.+|+.||||...+..... .+....+..|+..++.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~~~~~~E~~il~~ 56 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----------------------------RKGESMALNEKQILEK 56 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc-----------------------------hHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999876431110 0111223345544443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.............++||||++|++|.+.... ...-.++..++.++|+.|++|
T Consensus 57 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH 125 (285)
T cd05630 57 VNS-----------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125 (285)
T ss_pred CCC-----------CCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEe
Confidence 333 3333222233345678899999999999876421 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||.||+++.++.++++|||++......... .....+.++.+|+.-. ...
T Consensus 126 ~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-----------------~~~~g~~~y~aPE~~~-----------~~~ 177 (285)
T cd05630 126 RDLKPENILLDDHGHIRISDLGLAVHVPEGQTI-----------------KGRVGTVGYMAPEVVK-----------NER 177 (285)
T ss_pred CCCCHHHEEECCCCCEEEeeccceeecCCCccc-----------------cCCCCCccccChHHHc-----------CCC
Confidence 999999999999999999999998754322110 0001123344433210 011
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChh--HHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSY--FSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~--~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
++...|.|++|.++.++... +.|+..... .......+ .... ........+++++++
T Consensus 178 ~~~~~DiwslG~~l~~l~~g--~~Pf~~~~~~~~~~~~~~~------~~~~--------------~~~~~~~~~~~~~~l 235 (285)
T cd05630 178 YTFSPDWWALGCLLYEMIAG--QSPFQQRKKKIKREEVERL------VKEV--------------QEEYSEKFSPDARSL 235 (285)
T ss_pred CCCccccHHHHHHHHHHHhC--CCCCCCCCccchHHHHHhh------hhhh--------------hhhcCccCCHHHHHH
Confidence 23335667777766665541 222221100 00000000 0000 011224568899999
Q ss_pred HHHhhhccccCCCC-----HHHHHhhhhH
Q 005274 502 LVALLYKEGVFRID-----RLESLLTESL 525 (704)
Q Consensus 502 L~~lL~~d~~~R~~-----rle~Ll~~~~ 525 (704)
++++|..||..|++ .-|.+-|+.+
T Consensus 236 i~~~l~~~p~~R~s~~~~~~~~~~~h~~~ 264 (285)
T cd05630 236 CKMLLCKDPKERLGCQGGGAREVKEHPLF 264 (285)
T ss_pred HHHHhhcCHHHccCCCCCchHHHHcChhh
Confidence 99999999999998 6777777776
No 116
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.75 E-value=2.8e-17 Score=179.67 Aligned_cols=267 Identities=17% Similarity=0.177 Sum_probs=145.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+...+|+.||||+........ .-.+.+.+|+..+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~E~~~l~~ 55 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL------------------------------VSCKRVFRELKMLCF 55 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch------------------------------HHHHHHHHHHHHHHh
Confidence 57999999999999998899999999875321110 011345566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| .++.+.++ +...... ......+++|||+.+ .+.+... ....-.++..++.+||+.|++|+|
T Consensus 56 l~h-~niv~~~~----~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~d 128 (372)
T cd07853 56 FKH-DNVLSALD----ILQPPHI-DPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRD 128 (372)
T ss_pred CCC-CCcCCHhh----eecCCCc-cccceEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 554 12221111 1100000 111257899999975 4544321 112236778899999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHH-------HHHHHHhhcc-ChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGF-------IEACLHLVNR-DFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~-------~~~~~~l~~~-d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
+||.||+++.+|.++++|||++........... ....+.++.+ ..+..+.|+|++|++ +.
T Consensus 129 lkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i------------l~ 196 (372)
T cd07853 129 IKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCI------------FA 196 (372)
T ss_pred CChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHH------------HH
Confidence 999999999999999999999875432211100 0112222222 223445667776654 22
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhH--HhhhccCCC
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYI--ARKVLTDSS 495 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i--~r~ll~d~s 495 (704)
+++.+. ..+...+..+.+..+... . ..|+. ..+.... ++....+.... ...|.. .-.+....+
T Consensus 197 el~~g~--~pf~~~~~~~~~~~i~~~---~--g~~~~-~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 261 (372)
T cd07853 197 ELLGRR--ILFQAQSPIQQLDLITDL---L--GTPSL-EAMRSAC---EGARAHILRGP----HKPPSLPVLYTLSSQAT 261 (372)
T ss_pred HHHcCC--CCCCCCCHHHHHHHHHHH---c--CCCCH-HHHHHhh---HHHHHHHHhCC----CCCCchHHhcccCCCCC
Confidence 222110 011111211222111111 1 11111 1111110 11000000000 000111 112234568
Q ss_pred hHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 496 PQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 496 p~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++++++.+||..||..|++..+.|.|+.+
T Consensus 262 ~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 291 (372)
T cd07853 262 HEAVHLLCRMLVFDPDKRISAADALAHPYL 291 (372)
T ss_pred HHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence 899999999999999999999999999876
No 117
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.75 E-value=1.5e-17 Score=178.83 Aligned_cols=237 Identities=18% Similarity=0.163 Sum_probs=139.6
Q ss_pred ccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||+|+||.||+|++. .+++.||||+.+.+... +....+..|+
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------~~~~~~~~E~ 61 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA-------------------------------SEHKALMSEL 61 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccch-------------------------------HHHHHHHHHH
Confidence 57999999999999852 35678999998643211 1112344555
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeece-eeeecccceeEEEEeccCCChhhHHhhh-------------------------
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPE-MYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------- 323 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~-v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------- 323 (704)
..+....+ +++|.-.. .+.......+++|||++|++|.++....
T Consensus 62 ~~l~~l~~----------h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (338)
T cd05102 62 KILIHIGN----------HLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQS 131 (338)
T ss_pred HHHHHhcc----------CcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhh
Confidence 55554422 23332211 1222234578999999999998764310
Q ss_pred ----------------------------------------------hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCC
Q 005274 324 ----------------------------------------------LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG 357 (704)
Q Consensus 324 ----------------------------------------------l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG 357 (704)
..-.++..++.+||+.|++|+|+||+||+++.++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~ 211 (338)
T cd05102 132 RVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN 211 (338)
T ss_pred ccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC
Confidence 0124777889999999999999999999999999
Q ss_pred cEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHH
Q 005274 358 KLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLL 437 (704)
Q Consensus 358 ~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~ 437 (704)
.++++|||+++.+....... ..+. ...+.++++||.- ....++...|.|++|.++
T Consensus 212 ~~kl~DfG~a~~~~~~~~~~--------~~~~------~~~~~~y~aPE~~-----------~~~~~~~~sDiwslG~il 266 (338)
T cd05102 212 VVKICDFGLARDIYKDPDYV--------RKGS------ARLPLKWMAPESI-----------FDKVYTTQSDVWSFGVLL 266 (338)
T ss_pred cEEEeecccccccccCcchh--------cccC------CCCCccccCcHHh-----------hcCCCCcccCHHHHHHHH
Confidence 99999999988654321100 0000 0011334444421 112234456777888777
Q ss_pred HHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHH
Q 005274 438 GNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRL 517 (704)
Q Consensus 438 ~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rl 517 (704)
.+++.. -..++.-...-..+.+.+ .+|. ... .....++++++++.+++..||..|.+.-
T Consensus 267 ~el~~~-g~~pf~~~~~~~~~~~~~--~~~~------~~~------------~~~~~~~~l~~li~~cl~~dp~~RPs~~ 325 (338)
T cd05102 267 WEIFSL-GASPYPGVQINEEFCQRL--KDGT------RMR------------APENATPEIYRIMLACWQGDPKERPTFS 325 (338)
T ss_pred HHHHhC-CCCCCCCCCccHHHHHHH--hcCC------CCC------------CCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence 666531 111221110000111111 0110 000 1134678899999999999999998764
Q ss_pred H
Q 005274 518 E 518 (704)
Q Consensus 518 e 518 (704)
+
T Consensus 326 e 326 (338)
T cd05102 326 A 326 (338)
T ss_pred H
Confidence 4
No 118
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.75 E-value=2.2e-17 Score=168.98 Aligned_cols=134 Identities=22% Similarity=0.346 Sum_probs=99.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||+|+....-.. ........+|+.+++.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~------------------------------~~~~~~~~~e~~~~~~ 54 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE------------------------------EEEREENIREIKILRR 54 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH------------------------------HHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEecccccc------------------------------ccccchhhhhhhcccc
Confidence 5799999999999999999999999998754221 1111122335555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|++|.++... ...-.++..++.+||+.|++|+|
T Consensus 55 l~~-----------~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d 123 (260)
T PF00069_consen 55 LRH-----------PNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRD 123 (260)
T ss_dssp HTB-----------TTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred ccc-----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 433 4443333344447778899999999999876541 11225777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~ 369 (704)
+||.||+++.+|+++++|||.+..
T Consensus 124 ikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 124 IKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp BSGGGEEESTTSEEEESSGTTTEE
T ss_pred cccccccccccccccccccccccc
Confidence 999999999999999999999864
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=2e-17 Score=188.51 Aligned_cols=242 Identities=17% Similarity=0.158 Sum_probs=144.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+.+..... ++-.....+|+..+.+
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~------------------------------~~~~~~~~~Ei~~l~~ 87 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS------------------------------EADKNRAQAEVCCLLN 87 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC------------------------------HHHHHHHHHHHHHHhc
Confidence 5799999999999999989999999998643110 0111233445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeee--------ecccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV--------EQTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSF 333 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~--------e~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L 333 (704)
..| +++.-..... +.....++||||++|++|.+.... ...-.++..++
T Consensus 88 ~~h-----------~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL 156 (496)
T PTZ00283 88 CDF-----------FSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAV 156 (496)
T ss_pred CCC-----------CcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHH
Confidence 433 2221111110 111135799999999999876431 11225677889
Q ss_pred HHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHH
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVT 413 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~ 413 (704)
.++|+.|++|+|+||.|||++.+|.++|+|||+++.+......... .....+.+|++||.-.
T Consensus 157 ~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~--------------~~~~Gt~~Y~aPE~~~---- 218 (496)
T PTZ00283 157 HHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVG--------------RTFCGTPYYVAPEIWR---- 218 (496)
T ss_pred HHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccccc--------------ccccCCcceeCHHHhC----
Confidence 9999999999999999999999999999999998765432111000 0001123344443210
Q ss_pred HHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC
Q 005274 414 KALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 414 ~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d 493 (704)
...++...|.|++|.++.++... +.||.-. ....++.... .+ .+.. +...
T Consensus 219 -------~~~~s~k~DVwSlGvilyeLltG--~~Pf~~~-~~~~~~~~~~--~~-------~~~~-----------~~~~ 268 (496)
T PTZ00283 219 -------RKPYSKKADMFSLGVLLYELLTL--KRPFDGE-NMEEVMHKTL--AG-------RYDP-----------LPPS 268 (496)
T ss_pred -------CCCCCcHHHHHHHHHHHHHHHHC--CCCCCCC-CHHHHHHHHh--cC-------CCCC-----------CCCC
Confidence 01122234556666666555432 2222211 1111111111 11 1111 1135
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+++++++++.||..||..|++.-+.|-|+.+
T Consensus 269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~ 300 (496)
T PTZ00283 269 ISPEMQEIVTALLSSDPKRRPSSSKLLNMPIC 300 (496)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHHhCHHH
Confidence 68899999999999999999999888888654
No 120
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.75 E-value=9.1e-18 Score=177.38 Aligned_cols=134 Identities=19% Similarity=0.303 Sum_probs=95.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||+|..+...... ......+|+..++.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~~~~~~~E~~~l~~ 60 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-------------------------------APCTAIREVSLLKD 60 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-------------------------------chhHHHHHHHHHHh
Confidence 57999999999999998899999999876432110 01122345555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||++| .+.+.... ...-.++..++.+||+.|++|+
T Consensus 61 l~h-----------~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~ 128 (301)
T cd07873 61 LKH-----------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHR 128 (301)
T ss_pred cCC-----------CCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 433 3333323334445678899999986 55544221 1222567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.++.++++|||++....
T Consensus 129 dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 129 DLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred CCCHHHEEECCCCcEEECcCcchhccC
Confidence 999999999999999999999987543
No 121
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.75 E-value=3e-18 Score=187.74 Aligned_cols=234 Identities=20% Similarity=0.251 Sum_probs=161.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|+||.++..+++.++..+++|.++- ....+.-......|++++..
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l------------------------------~~~t~~~r~~A~~E~~lis~ 59 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINL------------------------------EKLTEPERRSAIQEMDLLSK 59 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEec------------------------------cccCchhhHHHHHHHHHHHh
Confidence 569999999999999999999999998761 11111222355667776666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccc-eeEEEEeccCCChhhHHhh----hhHH-------HHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTR-KVLIMEWVEGQKLSEVKDL----YLIE-------VGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~-~vLVmE~i~G~~L~d~~~~----~l~e-------~~v~~~L~qLh~~G~~ 342 (704)
.+| |+++--+-.|...+. .++||+||+|+++.+.... .+.+ .++..++.+||+.+++
T Consensus 60 ~~h-----------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iL 128 (426)
T KOG0589|consen 60 LLH-----------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVL 128 (426)
T ss_pred ccC-----------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 555 555444444555666 8899999999999987542 1222 5677788999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHH--HH----HHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE--GF----IEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~--~~----~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|||+|+.|||.+.++.+++.|||+++.++++... .+ ..+++.++....|+...|+|++||...+..
T Consensus 129 HRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~-------- 200 (426)
T KOG0589|consen 129 HRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMC-------- 200 (426)
T ss_pred cccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHH--------
Confidence 9999999999999999999999999999877511 11 225666777777778888888887522110
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCCh
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
.+...+...+...+..++. ++. .+| + -...|.
T Consensus 201 ------~lk~aF~a~~m~~Li~ki~------------------------~~~---~~P----l-----------p~~ys~ 232 (426)
T KOG0589|consen 201 ------TLKPAFKASNMSELILKIN------------------------RGL---YSP----L-----------PSMYSS 232 (426)
T ss_pred ------hcccccCccchHHHHHHHh------------------------hcc---CCC----C-----------CccccH
Confidence 0111222222222221111 111 111 1 135688
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++.+++.||.++|..|.++.+-|.++.+
T Consensus 233 el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 233 ELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred HHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99999999999999999999998888654
No 122
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.75 E-value=1.8e-17 Score=173.13 Aligned_cols=245 Identities=17% Similarity=0.180 Sum_probs=148.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...+|+.||||+...+... +....+.+|++.+..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 55 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV-------------------------------ELQKQIMSELEILYK 55 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh-------------------------------HHHHHHHHHHHHHHh
Confidence 5799999999999999889999999997643211 112234445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----hhHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----YLIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----~l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
..| +++.-..-+.......++||||++|+.+...... ...-.++..++.++|+.|++|+|+||.
T Consensus 56 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 124 (279)
T cd06619 56 CDS-----------PYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPS 124 (279)
T ss_pred CCC-----------CCeeeEEEEEEECCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHH
Confidence 333 4544444444556678899999999988654321 123356778899999999999999999
Q ss_pred cEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCC
Q 005274 350 NLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVR 429 (704)
Q Consensus 350 NILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~ 429 (704)
||+++.+|.++++|||++..+........ ..+..+++|+.-.. ..++...|
T Consensus 125 Nill~~~~~~~l~dfg~~~~~~~~~~~~~------------------~~~~~y~aPE~~~~-----------~~~~~~~D 175 (279)
T cd06619 125 NMLVNTRGQVKLCDFGVSTQLVNSIAKTY------------------VGTNAYMAPERISG-----------EQYGIHSD 175 (279)
T ss_pred HEEECCCCCEEEeeCCcceecccccccCC------------------CCChhhcCceeecC-----------CCCCCcch
Confidence 99999999999999999876543221110 11223444442110 11223345
Q ss_pred ccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhcc
Q 005274 430 NISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKE 509 (704)
Q Consensus 430 ~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d 509 (704)
.|++|.++.++... ..++.-...-..........+.+.....+.. .....++++++++.++|..|
T Consensus 176 vwslG~~l~~l~~g--~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~li~~~l~~~ 240 (279)
T cd06619 176 VWSLGISFMELALG--RFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL-------------PVGQFSEKFVHFITQCMRKQ 240 (279)
T ss_pred HHHHHHHHHHHHhC--CCCchhhcccccccchHHHHHHHhccCCCCC-------------CCCcCCHHHHHHHHHHhhCC
Confidence 56666665555431 1111100000000000000111111111110 01246789999999999999
Q ss_pred ccCCCCHHHHHhhhhH
Q 005274 510 GVFRIDRLESLLTESL 525 (704)
Q Consensus 510 ~~~R~~rle~Ll~~~~ 525 (704)
|..|++.-+.+-|+.+
T Consensus 241 P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 241 PKERPAPENLMDHPFI 256 (279)
T ss_pred hhhCCCHHHHhcCccc
Confidence 9999998888878765
No 123
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.75 E-value=1.6e-17 Score=176.28 Aligned_cols=134 Identities=19% Similarity=0.298 Sum_probs=91.5
Q ss_pred CCccccccccceEEEEEEcc--CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 193 SPEPVAAASLGQVYQARLRQ--SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 193 ~~~PIgsGS~GQVyrA~lk~--tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+...||.|+||.||+|+.+. ++..||+|..+.... ...+.+|+.
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----------------------------------~~~~~~E~~ 50 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----------------------------------SMSACREIA 50 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----------------------------------cHHHHHHHH
Confidence 44579999999999999763 567899998764210 112345666
Q ss_pred HHHHHhhHHHHHHHhcCCccee-eceeee-ecccceeEEEEeccCCChhhHHh------------------hhhHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVL-IPEMYV-EQTTRKVLIMEWVEGQKLSEVKD------------------LYLIEVGVY 330 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~-e~ss~~vLVmE~i~G~~L~d~~~------------------~~l~e~~v~ 330 (704)
.+++.+| +++. +..++. ......+++|||+++ .+.++.. ....-.++.
T Consensus 51 ~l~~l~h-----------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 118 (317)
T cd07867 51 LLRELKH-----------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118 (317)
T ss_pred HHHhCCC-----------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHH
Confidence 6655544 3332 222222 223456899999976 4433321 011225777
Q ss_pred HHHHHHHHCCccccCCCCCcEEE----ecCCcEEEEecCCccccCh
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFR----SYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv----~~dG~l~liDFGl~~~l~~ 372 (704)
.++.+||+.|++|+|+||+||++ +.+|.++++|||+++.+..
T Consensus 119 ~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~ 164 (317)
T cd07867 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 164 (317)
T ss_pred HHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCC
Confidence 88999999999999999999999 4568999999999986643
No 124
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.75 E-value=1.4e-17 Score=173.41 Aligned_cols=136 Identities=25% Similarity=0.285 Sum_probs=99.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+....... +.....+.+|+..++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLE------------------------------GGIPNQALREIKALQA 55 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEccccc------------------------------chhhHHHHHHHHHHHh
Confidence 4699999999999999889999999997643110 1122344556555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||+ |++|.+.... ...-.++..++.++|+.|++|+
T Consensus 56 ~~~-----------~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 123 (286)
T cd07832 56 CQH-----------PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHR 123 (286)
T ss_pred CCC-----------CCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 543 33222222334466789999999 9999876421 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||.||+++.+|.++++|||++.....
T Consensus 124 dl~p~ni~~~~~~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 124 DLKPANLLISADGVLKIADFGLARLFSE 151 (286)
T ss_pred CcCHHHEEEcCCCcEEEeeeeecccccC
Confidence 9999999999999999999999887654
No 125
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.75 E-value=2.4e-17 Score=180.85 Aligned_cols=249 Identities=18% Similarity=0.136 Sum_probs=151.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||+|+....-.. .......+.+|+..++.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~i~~~ 99 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-----------------------------KRSDSAFFWEERDIMAF 99 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-----------------------------hhhhHHHHHHHHHHHHh
Confidence 5699999999999999989999999997531000 00011223344444433
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+ ++++.-.....+.....++||||++|++|.++... .....++..++.+||+.|++|||+
T Consensus 100 ~~-----------hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDL 168 (370)
T cd05621 100 AN-----------SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 168 (370)
T ss_pred CC-----------CCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 32 24444333344556678999999999999887532 123357788999999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+|||++.+|.++++|||++..+....... ......+.++++||.-... --...++.
T Consensus 169 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~---------------~~~~~gt~~Y~aPE~~~~~-------~~~~~~~~ 226 (370)
T cd05621 169 KPDNMLLDKHGHLKLADFGTCMKMDETGMVR---------------CDTAVGTPDYISPEVLKSQ-------GGDGYYGR 226 (370)
T ss_pred CHHHEEECCCCCEEEEecccceecccCCcee---------------cccCCCCcccCCHHHHhcc-------CCCCCCCc
Confidence 9999999999999999999988764321100 0011233455555432100 00011344
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..||.-..... ..+. +... ...+.+ |- -...++.+++++..+|
T Consensus 227 ~~DiwSlG~ilyell~G--~~Pf~~~~~~~-~~~~------i~~~-~~~~~~-----p~-----~~~~s~~~~~li~~~L 286 (370)
T cd05621 227 ECDWWSVGVFLFEMLVG--DTPFYADSLVG-TYSK------IMDH-KNSLNF-----PE-----DVEISKHAKNLICAFL 286 (370)
T ss_pred ccCEEeehHHHHHHHhC--CCCCCCCCHHH-HHHH------HHhC-CcccCC-----CC-----cccCCHHHHHHHHHHc
Confidence 57888888888777642 23332221111 1111 1110 001111 10 0135888999999999
Q ss_pred hcccc--CCCCHHHHHhhhhH
Q 005274 507 YKEGV--FRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~--~R~~rle~Ll~~~~ 525 (704)
..++. .|.+..+.+-|+.+
T Consensus 287 ~~~~~r~~R~~~~e~l~hp~~ 307 (370)
T cd05621 287 TDREVRLGRNGVEEIKQHPFF 307 (370)
T ss_pred cCchhccCCCCHHHHhcCccc
Confidence 85443 37788888888765
No 126
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.74 E-value=8.4e-18 Score=200.13 Aligned_cols=257 Identities=17% Similarity=0.195 Sum_probs=153.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+.+.... +...+.+.+|+..+..
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~-----------------------------e~~~~rflrEi~ILs~ 58 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN-----------------------------PLLKKRFLREAKIAAD 58 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC-----------------------------HHHHHHHHHHHHHHHh
Confidence 57999999999999999899999999987542210 1122344455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------h--HHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------L--IEVGVYCSFN 334 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------l--~e~~v~~~L~ 334 (704)
.+| +++.-..-+.......+++|||++|++|.++.... + +-.++..++.
T Consensus 59 L~H-----------PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~ 127 (932)
T PRK13184 59 LIH-----------PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIE 127 (932)
T ss_pred CCC-----------cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHH
Confidence 433 34332222334456789999999999998764310 0 1146778899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHH-HHHH-HHhhccChhHHHHHHHhcCCCCCccchHHH
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGF-IEAC-LHLVNRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~-~~~~-~~l~~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
++|+.|++|||+||+||+++.+|+++++|||++........... .... ................+.++++|+.-.
T Consensus 128 yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~--- 204 (932)
T PRK13184 128 YVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL--- 204 (932)
T ss_pred HHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc---
Confidence 99999999999999999999999999999999987632110000 0000 000000000000112345555555211
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
+...+...|.|++|.++.++.... .|+.-...-....+ + ...+|. ...| ..
T Consensus 205 --------g~~~S~kSDIWSLGVILyELLTG~--~PF~~~~~~ki~~~-----~---~i~~P~-----~~~p------~~ 255 (932)
T PRK13184 205 --------GVPASESTDIYALGVILYQMLTLS--FPYRRKKGRKISYR-----D---VILSPI-----EVAP------YR 255 (932)
T ss_pred --------CCCCCcHhHHHHHHHHHHHHHHCC--CCCCCcchhhhhhh-----h---hccChh-----hccc------cc
Confidence 112334457788888877776532 23221111100000 0 001111 0011 12
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhh
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
+.++.+.+++.++|..||..|++..++|++.
T Consensus 256 ~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~ 286 (932)
T PRK13184 256 EIPPFLSQIAMKALAVDPAERYSSVQELKQD 286 (932)
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 5678899999999999999999998888774
No 127
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.74 E-value=4.3e-17 Score=175.47 Aligned_cols=251 Identities=14% Similarity=0.136 Sum_probs=149.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+++.+++.||+|+..... .. .......+.+|++.+..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~---------------------------~~~~~~~~~~e~~~l~~ 57 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--ML---------------------------KRAETACFREERDVLVN 57 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HH---------------------------HhhHHHHHHHHHHHHhh
Confidence 57999999999999999899999999975210 00 00111123334433332
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.. ++++.-.....+.....++||||++|++|.++... ...-.++..++.++|+.|++|+
T Consensus 58 ~~-----------~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHr 126 (332)
T cd05623 58 GD-----------NQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHR 126 (332)
T ss_pred CC-----------CCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 22 24433333344455678999999999999887532 1223567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||.||+++.+|.++++|||++..+....... ......+.++++||.-... . .-...+
T Consensus 127 Dlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~---------------~~~~~gt~~y~aPE~~~~~-----~-~~~~~~ 185 (332)
T cd05623 127 DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ---------------SSVAVGTPDYISPEILQAM-----E-DGKGKY 185 (332)
T ss_pred CCCHHHEEECCCCCEEEeecchheecccCCcce---------------ecccccCccccCHHHHhcc-----c-cCCCCC
Confidence 999999999999999999999987653221100 0001224556665532100 0 000123
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++.. -+.||.-....... ..+. . ....+.+ | ....+.++++++++++
T Consensus 186 ~~~~DvwSlGvil~ell~--g~~Pf~~~~~~~~~-~~i~--~-----~~~~~~~-----p----~~~~~~s~~~~~li~~ 246 (332)
T cd05623 186 GPECDWWSLGVCMYEMLY--GETPFYAESLVETY-GKIM--N-----HKERFQF-----P----AQVTDVSEDAKDLIRR 246 (332)
T ss_pred CCcCCEEeeHHHHHHHhc--CCCCCCCCCHHHHH-HHHh--C-----CCccccC-----C----CccccCCHHHHHHHHH
Confidence 445788999998877764 22333222211111 1110 0 0111111 1 0123568999999999
Q ss_pred hhhcccc--CCCCHHHHHhhhhH
Q 005274 505 LLYKEGV--FRIDRLESLLTESL 525 (704)
Q Consensus 505 lL~~d~~--~R~~rle~Ll~~~~ 525 (704)
||..++. -|++..+.+-|+.+
T Consensus 247 ll~~~~~r~~r~~~~~~~~h~~f 269 (332)
T cd05623 247 LICSREHRLGQNGIEDFKQHPFF 269 (332)
T ss_pred HccChhhhcCCCCHHHHhCCCCc
Confidence 9976443 35667777777765
No 128
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.74 E-value=2.3e-17 Score=182.07 Aligned_cols=260 Identities=18% Similarity=0.172 Sum_probs=147.5
Q ss_pred ccccccccceEEEEEEc--cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR--QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk--~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||.|++|.||+|+.+ .++..||||+...+. ...+|++.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------------------------------------~~~~E~~il 140 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------------------------------------TPGREIDIL 140 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------------------------------------cHHHHHHHH
Confidence 57999999999999864 356789999875321 122455555
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
+..+| +++.-..-++......+++||++.| .+.+.... ..+-.++..++.+||+.|++|
T Consensus 141 ~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 141 KTISH-----------RAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred HhcCC-----------CCccceeeeEeeCCEEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 54443 3322222233445678899999965 45443221 122357778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHH----HH----HHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE----GF----IEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~----~~----~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
+|+||.|||++.+|.++++|||++..+...... .+ ....++++....+....|+|++|++
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi------------ 276 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLV------------ 276 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHH------------
Confidence 999999999999999999999998765432110 01 0112333333334445666666654
Q ss_pred HHHHHHHHh-hccCCccCHHhHHHHHHHHHhhcCCCCChhHH-HHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC
Q 005274 416 LTGVFQNAV-AKGVRNISFGDLLGNLGATMYKFKFRIPSYFS-LVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 416 L~~v~~~~~-~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~-liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d 493 (704)
+.+++.+.. ..+....+....+..+...+...+...|.... .+.+.+. -......|.+.+ .+++. -..
T Consensus 277 l~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~---~~~ 346 (392)
T PHA03207 277 LFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFK---QYAIVLRPPYTI----PPVIR---KYG 346 (392)
T ss_pred HHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHH---hhcccccCCccc----cchhh---ccC
Confidence 222221110 00111111122222333333333333332211 1111111 011111222211 01111 123
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+.++++++++||..||..|+++-|.|.|+.|
T Consensus 347 ~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f 378 (392)
T PHA03207 347 MHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF 378 (392)
T ss_pred cchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence 56789999999999999999999999999987
No 129
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.74 E-value=1.7e-17 Score=178.63 Aligned_cols=138 Identities=14% Similarity=0.230 Sum_probs=99.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||||+....-.. .......+.+|...+..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 57 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML-----------------------------KRAETACFREERNVLVN 57 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-----------------------------hhHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999997531000 00011122333333222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
. +++++.....+.+.....++||||++|++|.++... ...-.++..++.++|+.|++|+
T Consensus 58 ~-----------~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHr 126 (331)
T cd05624 58 G-----------DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHR 126 (331)
T ss_pred C-----------CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 2 234554444455556778999999999999887532 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||+||+++.+|.++++|||++..+..
T Consensus 127 Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 127 DIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred cCchHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999999999999999876543
No 130
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.74 E-value=2.9e-17 Score=174.07 Aligned_cols=256 Identities=18% Similarity=0.182 Sum_probs=147.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|++|.||+|+.+.+++.||||+..++... .......+.+|++.+..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 57 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLI-----------------------------LRNQIQQVFVERDILTF 57 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhh-----------------------------hHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999987643110 00111233445444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-........+..++||||++|++|.++... ...-.++..++.++|+.|++|+|
T Consensus 58 ~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 126 (305)
T cd05609 58 AEN-----------PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRD 126 (305)
T ss_pred CCC-----------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 333 4433222223334456899999999999877532 11124667889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHH--HHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDAL--AKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~l--a~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+||+||+++.+|.++++|||+++.........+.. .....+.... .....+.++++|+.- ....
T Consensus 127 l~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~y~aPE~~-----------~~~~ 192 (305)
T cd05609 127 LKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYE---GHIEKDTREFLDKQVCGTPEYIAPEVI-----------LRQG 192 (305)
T ss_pred CchHHEEECCCCCEEEeeCCCccccCcCccccccc---cccccchhhccccCCccCccccCchhc-----------cCCC
Confidence 99999999999999999999876321111000000 0000000000 001123445555531 1122
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
++...|.|++|.++.++......+.-.-+.. +..... .+ .+. .|.. ....+++++++++
T Consensus 193 ~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---~~~~~~--~~-----~~~-------~~~~----~~~~~~~~~~li~ 251 (305)
T cd05609 193 YGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFGQVI--SD-----DIE-------WPEG----DEALPADAQDLIS 251 (305)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHH--hc-----ccC-------CCCc----cccCCHHHHHHHH
Confidence 3444677888888777654221111111111 111100 00 000 0100 0135778999999
Q ss_pred HhhhccccCCCC---HHHHHhhhhH
Q 005274 504 ALLYKEGVFRID---RLESLLTESL 525 (704)
Q Consensus 504 ~lL~~d~~~R~~---rle~Ll~~~~ 525 (704)
+|+.+||..|++ ..+.|.|+.+
T Consensus 252 ~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 252 RLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred HHhccChhhccCccCHHHHHhCccc
Confidence 999999999997 5776777655
No 131
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.74 E-value=3.4e-17 Score=173.13 Aligned_cols=240 Identities=21% Similarity=0.220 Sum_probs=146.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||+|++|+||+|+.+.+|+.||||+.+-... .....+.+|+..++.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--------------------------------~~~~~~~~e~~~l~~ 73 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ--------------------------------QRRELLFNEVVIMRD 73 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch--------------------------------hHHHHHHHHHHHHHh
Confidence 469999999999999988999999998642210 011234445544444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| +++.-..-+.......+++|||++|+.|.++... ...-.++..++.++|+.|++|+|+
T Consensus 74 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl 142 (292)
T cd06657 74 YQH-----------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI 142 (292)
T ss_pred cCC-----------cchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 433 2222222223335678999999999999876422 112256778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.+|.++++|||++..+........ ....+.++++|+.-.. ...+.
T Consensus 143 ~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~----------------~~~~~~~y~~pE~~~~-----------~~~~~ 195 (292)
T cd06657 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK----------------SLVGTPYWMAPELISR-----------LPYGP 195 (292)
T ss_pred CHHHEEECCCCCEEEcccccceeccccccccc----------------ccccCccccCHHHhcC-----------CCCCc
Confidence 99999999999999999999876543221100 0011233444331100 01122
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-..... ..+ .+...+.+.+.. ....++.+.+++.+||
T Consensus 196 ~~Dv~slGvil~el~tg--~~p~~~~~~~~-~~~------~~~~~~~~~~~~------------~~~~~~~l~~li~~~l 254 (292)
T cd06657 196 EVDIWSLGIMVIEMVDG--EPPYFNEPPLK-AMK------MIRDNLPPKLKN------------LHKVSPSLKGFLDRLL 254 (292)
T ss_pred hhhHHHHHHHHHHHHhC--CCCCCCCCHHH-HHH------HHHhhCCcccCC------------cccCCHHHHHHHHHHH
Confidence 23556666666555431 11221111111 111 111111111111 1245788999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
..||..|++.-+.|.|+.+
T Consensus 255 ~~~P~~R~~~~~ll~~~~~ 273 (292)
T cd06657 255 VRDPAQRATAAELLKHPFL 273 (292)
T ss_pred hCCcccCcCHHHHhcChHH
Confidence 9999999999999999876
No 132
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.74 E-value=5.8e-17 Score=183.81 Aligned_cols=241 Identities=19% Similarity=0.183 Sum_probs=150.0
Q ss_pred CccccccccceEEEEEEccC-CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQS-GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~t-G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
.+.+|.|++|.||+|....+ ++.||+|....+.. .....+.+|+..+
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~--------------------------------~~~~~~~~E~~~l 119 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE--------------------------------RQAAYARSELHCL 119 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH--------------------------------HHHHHHHHHHHHH
Confidence 35799999999999998777 78899997542211 0112233454444
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHHHHHHHC
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L~qLh~~ 339 (704)
...+| +++.-..-+.+..+..+|||||++|++|.+.... ...-.++..+|.++|+.
T Consensus 120 ~~l~H-----------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 120 AACDH-----------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred HhCCC-----------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 33332 5554444455566788999999999999875321 11225777889999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
|++|||+||.|||++.+|.++++|||++..+......... .....+.+|++|+.-.
T Consensus 189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~--------------~~~~gt~~y~aPE~~~---------- 244 (478)
T PTZ00267 189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA--------------SSFCGTPYYLAPELWE---------- 244 (478)
T ss_pred CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccc--------------cccCCCccccCHhHhC----------
Confidence 9999999999999999999999999999876543211000 0011234455444211
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
...++...|.|++|.++.+++.. ..|+.-+.... ++..+. . .++... | ...+++++
T Consensus 245 -~~~~~~~~Dv~slG~~l~el~tg--~~Pf~~~~~~~-~~~~~~--~-------~~~~~~----~-------~~~s~~~~ 300 (478)
T PTZ00267 245 -RKRYSKKADMWSLGVILYELLTL--HRPFKGPSQRE-IMQQVL--Y-------GKYDPF----P-------CPVSSGMK 300 (478)
T ss_pred -CCCCCcHHhHHHHHHHHHHHHhC--CCCCCCCCHHH-HHHHHH--h-------CCCCCC----C-------ccCCHHHH
Confidence 01123334566677666666542 22332222211 111111 1 111110 1 24678999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++..||.+||..|++.-+.|.++.+
T Consensus 301 ~li~~~L~~dP~~Rps~~~~l~~~~~ 326 (478)
T PTZ00267 301 ALLDPLLSKNPALRPTTQQLLHTEFL 326 (478)
T ss_pred HHHHHHhccChhhCcCHHHHHhCHHH
Confidence 99999999999999999888877654
No 133
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.74 E-value=1.7e-17 Score=172.93 Aligned_cols=135 Identities=22% Similarity=0.327 Sum_probs=95.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||+|+.+..... .+....+.+|+..++.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~------------------------------~~~~~~~~~ei~~l~~ 55 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD------------------------------EGVPSSALREICLLKE 55 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeeccccc------------------------------ccCccchhHHHHHHHh
Confidence 5699999999999999999999999987632110 0111234456666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-...+....+..+++|||++| ++.+.... ...-.++..++.+||+.|++|+
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~ 123 (284)
T cd07839 56 LKH-----------KNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHR 123 (284)
T ss_pred cCC-----------CCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 554 2222111122335678899999986 45443211 1122577888999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.+|.++++|||++..+.
T Consensus 124 dl~~~nil~~~~~~~~l~dfg~~~~~~ 150 (284)
T cd07839 124 DLKPQNLLINKNGELKLADFGLARAFG 150 (284)
T ss_pred CCCHHHEEEcCCCcEEECccchhhccC
Confidence 999999999999999999999987654
No 134
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.73 E-value=6.4e-17 Score=167.61 Aligned_cols=261 Identities=17% Similarity=0.134 Sum_probs=150.2
Q ss_pred hcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 189 FSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 189 F~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
|.++..++||.|++|+||+|..+.+|+.||||..+......... .....+..+.+..|
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~----------------------~~~~~~~~~~~~~e 58 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRH----------------------DSRQKDMVKALRSE 58 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhccc----------------------chHHHHHHHHHHHH
Confidence 45667789999999999999998899999999875321110000 00011122344445
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHC
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~ 339 (704)
+..++..+| +++.-..-+.......++||||++|++|.+.... ...-.++..++.++|+.
T Consensus 59 ~~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 127 (272)
T cd06629 59 IETLKDLDH-----------LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK 127 (272)
T ss_pred HHHHHhcCC-----------CCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 544444333 3332222244455678999999999999876432 12235677789999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
|++|+|++|+||+++.+|.++++|||++........... ......+.++++|+.-...
T Consensus 128 ~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~--------------~~~~~~~~~y~~PE~~~~~-------- 185 (272)
T cd06629 128 GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQ--------------NMSMQGSVFWMAPEVIHSY-------- 185 (272)
T ss_pred CeeecCCChhhEEEcCCCeEEEeeccccccccccccccc--------------cccccCCccccCHHHhccc--------
Confidence 999999999999999999999999999876432110000 0000011233333211000
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
...++...|.|++|.++.++... ..++........+.. .......+. +........+++++
T Consensus 186 -~~~~~~~~Dv~slG~~l~~l~~g--~~p~~~~~~~~~~~~------~~~~~~~~~----------~~~~~~~~~~~~~~ 246 (272)
T cd06629 186 -SQGYSAKVDIWSLGCVVLEMFAG--RRPWSDEEAIAAMFK------LGNKRSAPP----------IPPDVSMNLSPVAL 246 (272)
T ss_pred -cCCCCccchhHHHHHHHHHHHhC--CCCCcCcchHHHHHH------hhccccCCc----------CCccccccCCHHHH
Confidence 00122234556666666555542 122211111111110 000011111 11122335688999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhh
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
+++.+|+..||..|++.-+-|.|+
T Consensus 247 ~li~~~l~~~p~~Rps~~~il~~~ 270 (272)
T cd06629 247 DFLNACFTINPDNRPTARELLQHP 270 (272)
T ss_pred HHHHHHhcCChhhCCCHHHHhhCC
Confidence 999999999999999977766664
No 135
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=3.1e-19 Score=180.05 Aligned_cols=142 Identities=18% Similarity=0.316 Sum_probs=99.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..+|+|.||.|++|+.+.+|+.||+|+.--. .--+.|...-.+|++.+.-
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlme------------------------------neKeGfpitalreikiL~~ 72 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLME------------------------------NEKEGFPITALREIKILQL 72 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHh------------------------------ccccCCcHHHHHHHHHHHH
Confidence 4699999999999999999999999864210 0012344566788999888
Q ss_pred Hhh--HHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-----h-----hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKN--GLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-----L-----YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n--~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-----~-----~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| ..++.+..+... .|.. .+.+..+|||.+|+. +|.-+.. . .-+-.++..+|.++|...++
T Consensus 73 lkHenv~nliEic~tk~---Tp~~--r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kil 146 (376)
T KOG0669|consen 73 LKHENVVNLIEICRTKA---TPTN--RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKIL 146 (376)
T ss_pred hcchhHHHHHHHHhhcc---CCcc--cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 665 223333332221 1211 133457899999975 3332211 1 12235778899999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|||.||.|+||+.||.+++.|||+++.++.
T Consensus 147 HRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 147 HRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred hhcccHhhEEEcCCceEEeeccccccceec
Confidence 999999999999999999999999987653
No 136
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.73 E-value=6.7e-17 Score=177.31 Aligned_cols=247 Identities=18% Similarity=0.155 Sum_probs=146.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|+||.||+|+.+.+|+.||+|+....- .. .......+.+|+..++.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~--~~---------------------------~~~~~~~~~~e~~i~~~ 99 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--MI---------------------------KRSDSAFFWEERDIMAF 99 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHH--hh---------------------------hhHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999975310 00 00011223344444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| +++.-....+...+..++||||++|++|.++... ...-.++..++.+||+.|++|||+
T Consensus 100 ~~h-----------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL 168 (371)
T cd05622 100 ANS-----------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 168 (371)
T ss_pred CCC-----------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 322 4433222233445668899999999999887532 122356778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
||+|||++.+|.++++|||++..+....... ......+.++++|+.-... --...++.
T Consensus 169 kp~NIll~~~~~ikL~DfG~a~~~~~~~~~~---------------~~~~~gt~~y~aPE~l~~~-------~~~~~~~~ 226 (371)
T cd05622 169 KPDNMLLDKSGHLKLADFGTCMKMNKEGMVR---------------CDTAVGTPDYISPEVLKSQ-------GGDGYYGR 226 (371)
T ss_pred CHHHEEECCCCCEEEEeCCceeEcCcCCccc---------------ccCcccCccccCHHHHhcc-------CCCccCCC
Confidence 9999999999999999999988764321000 0011223455555531100 00011344
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..||.-..... ..+.+ .... ..+.+ | -..+.++++++++..||
T Consensus 227 ~~DiwSlGvilyell~G--~~Pf~~~~~~~-~~~~i------~~~~-~~~~~-----~-----~~~~~s~~~~~li~~~L 286 (371)
T cd05622 227 ECDWWSVGVFLYEMLVG--DTPFYADSLVG-TYSKI------MNHK-NSLTF-----P-----DDNDISKEAKNLICAFL 286 (371)
T ss_pred ccceeehhHHHHHHHhC--CCCCCCCCHHH-HHHHH------HcCC-CcccC-----C-----CcCCCCHHHHHHHHHHc
Confidence 56888888888777652 23333222211 11111 1100 01111 1 01257889999999999
Q ss_pred hccccCC---CCHHHHHhhhh
Q 005274 507 YKEGVFR---IDRLESLLTES 524 (704)
Q Consensus 507 ~~d~~~R---~~rle~Ll~~~ 524 (704)
. ++..| .+.-+.+-|..
T Consensus 287 ~-~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 287 T-DREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred C-ChhhhcCCCCHHHHhcCcc
Confidence 7 55554 34444444443
No 137
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.73 E-value=3e-17 Score=185.41 Aligned_cols=159 Identities=15% Similarity=0.108 Sum_probs=106.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.|++|.||+|++..+++.||||.... ....+|+++++.
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------------------------------------~~~~~E~~iL~~ 216 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWY--------------------------------------ASSVHEARLLRR 216 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEecccc--------------------------------------cCHHHHHHHHHH
Confidence 579999999999999999999999996321 122345555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| ++|.-..-+....+..+++||++.| .|.+.... ..+-.++..+|.+||+.||+|+
T Consensus 217 L~H-----------pnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 284 (461)
T PHA03211 217 LSH-----------PAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR 284 (461)
T ss_pred CCC-----------CCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence 444 3433322333445678899999965 55443211 1223677788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHH----H----HHHHHHHhhccChhHHHHHHHhcCCC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE----G----FIEACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~----~----~~~~~~~l~~~d~~~la~d~~slG~l 403 (704)
|+||+|||++.++.++++|||+++.+...... . ...+...++.+.......|+|++|++
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGvi 351 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLV 351 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 99999999999999999999998765432111 0 11122333333334455677777764
No 138
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.73 E-value=1.2e-16 Score=164.35 Aligned_cols=246 Identities=15% Similarity=0.128 Sum_probs=149.8
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||.|++|+||+|....+|+.||||+.+....... ...-...+.+|+..++
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~---------------------------~~~~~~~~~~e~~~l~ 59 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE---------------------------TKKEVNALECEIQLLK 59 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh---------------------------hHHHHHHHHHHHHHHH
Confidence 3689999999999999988999999999764321100 0000122334444333
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
..+ ++++....-+.+.....+++|||++|+.|.+.... ...-.++..++.+||+.|++|+
T Consensus 60 ~l~-----------~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 128 (263)
T cd06625 60 NLQ-----------HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHR 128 (263)
T ss_pred hCC-----------CCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 332 35554444455566788999999999999876432 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||+||+++.+|+++++|||++..+....... ..+ .....+..+++|+.-.. ...
T Consensus 129 dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~----------~~~---~~~~~~~~y~aPE~~~~-----------~~~ 184 (263)
T cd06625 129 DIKGANILRDSAGNVKLGDFGASKRLQTICSSG----------TGM---KSVTGTPYWMSPEVISG-----------EGY 184 (263)
T ss_pred CCCHHHEEEcCCCCEEEeecccceecccccccc----------ccc---cCCCcCccccCcceecc-----------CCC
Confidence 999999999999999999999987654321100 000 00011234555553221 112
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++... +.++.-+.......+. .. .+... .+-...++.+.+++++
T Consensus 185 ~~~~Di~slG~il~el~~g--~~p~~~~~~~~~~~~~-------~~--~~~~~-----------~~~~~~~~~~~~li~~ 242 (263)
T cd06625 185 GRKADVWSVGCTVVEMLTE--KPPWAEFEAMAAIFKI-------AT--QPTNP-----------QLPSHVSPDARNFLRR 242 (263)
T ss_pred CchhhhHHHHHHHHHHHhC--CCCccccchHHHHHHH-------hc--cCCCC-----------CCCccCCHHHHHHHHH
Confidence 2334667777776666542 2222222122111110 00 00000 0113467889999999
Q ss_pred hhhccccCCCCHHHHHhhh
Q 005274 505 LLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 505 lL~~d~~~R~~rle~Ll~~ 523 (704)
+|.++|..|.+.-+.|.|.
T Consensus 243 ~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 243 TFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HhhcCcccCCCHHHHhhCC
Confidence 9999999999987777664
No 139
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.6e-17 Score=183.60 Aligned_cols=242 Identities=19% Similarity=0.254 Sum_probs=161.7
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+.+.++.+.+ +|-|.||.||+|..+.++-..|-||+.-.-. |-...
T Consensus 30 P~d~WeIiGE--LGDGAFGKVyKA~nket~~lAAaKvIetkse--------------------------------EELED 75 (1187)
T KOG0579|consen 30 PRDHWEIIGE--LGDGAFGKVYKAVNKETKLLAAAKVIETKSE--------------------------------EELED 75 (1187)
T ss_pred HHHHHHHHhh--hcCccchhhhhhhcccchhhhhhhhhcccch--------------------------------hHHhh
Confidence 4555555544 8999999999999998888888888642211 22234
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh----------hhhHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD----------LYLIEVGVYCSFN 334 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~----------~~l~e~~v~~~L~ 334 (704)
..-||+++.++.| ..+.++++.+ -+.++.++..|||.||-++.+.- ...+-.+++.+|.
T Consensus 76 ylVEIeILa~CdH-P~ivkLl~ay----------y~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn 144 (1187)
T KOG0579|consen 76 YLVEIEILAECDH-PVIVKLLSAY----------YFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALN 144 (1187)
T ss_pred hhhhhhhhhcCCC-hHHHHHHHHH----------hccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 5678899999987 4555555421 24688999999999998877531 2344466777899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChh--HHHHHHHH--HHH--h-----hccChhHHHHHHHhcCCC
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE--LREGFIEA--CLH--L-----VNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~--~r~~~~~~--~~~--l-----~~~d~~~la~d~~slG~l 403 (704)
+||+.+|+|||+|.||||++-||.|++.|||.+...... .|..|++. |++ + .....|.+..|+|++|+.
T Consensus 145 ~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT 224 (1187)
T KOG0579|consen 145 WLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT 224 (1187)
T ss_pred HHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence 999999999999999999999999999999998765433 34555542 211 1 223355677788888863
Q ss_pred CCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccc
Q 005274 404 PPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTY 483 (704)
Q Consensus 404 ~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~ 483 (704)
.= ++.+ ...+-.++| .+|.++ .|+.+--|.+ +.
T Consensus 225 LI------------EMAq--iEPPHheln-------------------------pMRVll---KiaKSePPTL-----lq 257 (1187)
T KOG0579|consen 225 LI------------EMAQ--IEPPHHELN-------------------------PMRVLL---KIAKSEPPTL-----LQ 257 (1187)
T ss_pred HH------------HHhc--cCCCccccc-------------------------hHHHHH---HHhhcCCCcc-----cC
Confidence 10 0000 011112222 222222 1222222211 12
Q ss_pred hhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 484 PYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 484 P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
| ..+|-..+|.|.+.|.+||..||++.+-|-|+.+
T Consensus 258 P-------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv 292 (1187)
T KOG0579|consen 258 P-------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV 292 (1187)
T ss_pred c-------chhhhHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence 2 3567889999999999999999999998888765
No 140
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.73 E-value=1.4e-16 Score=172.44 Aligned_cols=287 Identities=20% Similarity=0.243 Sum_probs=163.0
Q ss_pred HHHhCCChhhhhccc-CCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHH
Q 005274 178 EQELGLPIDELFSEI-SPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQA 256 (704)
Q Consensus 178 e~elG~~~~eiF~~~-~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ 256 (704)
++|++..+.++...+ .-+.||.|++|.||+|..+.+|+.||||+.......
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------- 54 (343)
T cd07880 3 RQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS---------------------------- 54 (343)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc----------------------------
Confidence 445554444443322 236899999999999999989999999987532110
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHH
Q 005274 257 VVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVG 328 (704)
Q Consensus 257 ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~ 328 (704)
+.....+.+|++.++..+|. ++...+ .+..+..........++||||+ |.++.++... ...-.+
T Consensus 55 --~~~~~~~~~E~~~l~~l~h~-~iv~~~----~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~q 126 (343)
T cd07880 55 --ELFAKRAYRELRLLKHMKHE-NVIGLL----DVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQ 126 (343)
T ss_pred --hHHHHHHHHHHHHHHhcCCC-Ccccee----eeecCCccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHH
Confidence 11233456677777766551 111111 1111111111234568999999 7677765421 122357
Q ss_pred HHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH---HHHHHHHhhcc-ChhHHHHHHHhcCCCC
Q 005274 329 VYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG---FIEACLHLVNR-DFDALAKDFVTLGLLP 404 (704)
Q Consensus 329 v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~---~~~~~~~l~~~-d~~~la~d~~slG~l~ 404 (704)
+..++.++|+.|++|+|+||+||+++.+|.++++|||++.......... .....+..... .......|+|++|++
T Consensus 127 i~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~l- 205 (343)
T cd07880 127 MLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCI- 205 (343)
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHH-
Confidence 7788999999999999999999999999999999999988664321110 00011222221 223445677777764
Q ss_pred CccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccch
Q 005274 405 PTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYP 484 (704)
Q Consensus 405 p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P 484 (704)
+..++.+. .++..-+... .+... .......|..+...+..... ......+ |.+ .+
T Consensus 206 -----------l~~l~~g~--~pf~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~------~~ 260 (343)
T cd07880 206 -----------MAEMLTGK--PLFKGHDHLD---QLMEI-MKVTGTPSKEFVQKLQSEDA-KNYVKKL-PRF------RK 260 (343)
T ss_pred -----------HHHHHhCC--CCCCCCCHHH---HHHHH-HHhcCCCCHHHHHhhcchhH-HHHHHhc-ccc------Cc
Confidence 22222110 1111111111 11111 11223334444332221110 0000000 111 11
Q ss_pred hHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 485 YIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 485 ~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
-....+..+.++++++++.+||..||..|++.-+.+.|+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~ 302 (343)
T cd07880 261 KDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302 (343)
T ss_pred chHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence 123345567899999999999999999999999999998873
No 141
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.73 E-value=2.8e-17 Score=172.40 Aligned_cols=134 Identities=20% Similarity=0.295 Sum_probs=94.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+....+. ......+|++.++.
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~~~~~~e~~~l~~ 59 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-------------------------------VPFTAIREASLLKG 59 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-------------------------------CcHHHHHHHHHHHh
Confidence 67999999999999998899999999976332110 00122345444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|..+..... ....-.++..++.+||..|++|+|
T Consensus 60 l~h-----------~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 128 (291)
T cd07870 60 LKH-----------ANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128 (291)
T ss_pred cCC-----------CCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 433 444433334445567899999997543333221 112235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
+||+||+++.+|.++++|||++...
T Consensus 129 lkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 129 LKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred CChHHEEEcCCCcEEEecccccccc
Confidence 9999999999999999999998754
No 142
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.73 E-value=1.1e-17 Score=178.90 Aligned_cols=134 Identities=20% Similarity=0.296 Sum_probs=100.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-+|.|.+|.||.|+++.++...|+||+..... ... .-..+...|-+++.-
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l---~~r--------------------------kKl~Ra~tE~eIL~~ 133 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL---ASR--------------------------KKLKRAQTEREILSL 133 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHH---hhh--------------------------hHHHHHHHHHHHHHh
Confidence 569999999999999998999999999864211 100 001122233333333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccc--eeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTR--KVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~--~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~ 341 (704)
..| -.+|..|..+.+. .+|+||||.|++|..+.+. ++....+.++|+|||-.||
T Consensus 134 lDH-------------PFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi 200 (459)
T KOG0610|consen 134 LDH-------------PFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI 200 (459)
T ss_pred cCC-------------CccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce
Confidence 333 3466666655554 4699999999999887542 4556788899999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
+.||+||+|||+.+||+|.+.||-++...
T Consensus 201 vYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 201 VYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999999999999999997765
No 143
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.73 E-value=4.6e-17 Score=177.37 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=90.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+++.||+|+...+. ...|..+++.
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------------------------------------~~~E~~~l~~ 113 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------------------------------------TLIEAMLLQN 113 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCccc--------------------------------------cHHHHHHHHh
Confidence 57999999999999999899999999865321 1224444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||+.| .+.++... ..+-.++..++.+||+.|++||
T Consensus 114 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 114 VNH-----------PSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred CCC-----------CCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 333 2222222223345567899999976 44443211 1223577889999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccc
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
|+||.|||++.++.++++|||++..
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQF 206 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccc
Confidence 9999999999999999999999874
No 144
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.73 E-value=1.7e-17 Score=172.92 Aligned_cols=135 Identities=22% Similarity=0.343 Sum_probs=95.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|+||+|+.+.+|+.||||+.+..... .+....+..|++.+..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 55 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET------------------------------EGVPSTAIREISLLKE 55 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccc------------------------------cccchHHHHHHHHHHh
Confidence 5799999999999999989999999987632110 0111344556666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+.......++||||+.+ .+.+.... ...-.++..++.+||+.|++|
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H 123 (284)
T cd07860 56 LNH-----------PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLH 123 (284)
T ss_pred cCC-----------CCCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 554 2222111223345678899999965 56554321 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|++|+||+++.+|.++++|||++..+.
T Consensus 124 ~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 124 RDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred CCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999999999999999987554
No 145
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=2.1e-17 Score=183.13 Aligned_cols=142 Identities=21% Similarity=0.379 Sum_probs=110.4
Q ss_pred hhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHH
Q 005274 187 ELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLF 266 (704)
Q Consensus 187 eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~ 266 (704)
..|..| ++||-|.||.|+.++-..|...+|.|..|+. |+ +...-...+.
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-------DV----------------------l~rnQvaHVK 677 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-------DV----------------------LMRNQVAHVK 677 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhHHH-------HH----------------------Hhhhhhhhhh
Confidence 467777 7899999999999998878778888877631 21 1123335677
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHH
Q 005274 267 RELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 267 ~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh 337 (704)
.|-|++.||.| ++|+-...-++.....|+|||||+|+++..+.-. ++.-..+.|++..+|
T Consensus 678 AERDILAEADn-----------~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVH 746 (1034)
T KOG0608|consen 678 AERDILAEADN-----------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVH 746 (1034)
T ss_pred hhhhhHhhcCC-----------cceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988 4444333333445678999999999999876421 334467789999999
Q ss_pred HCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 338 EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
..||+|||+||.||||+.||+|||.|||+|+-+
T Consensus 747 kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 747 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred hccceecccCccceEEccCCceeeeeccccccc
Confidence 999999999999999999999999999999865
No 146
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.73 E-value=9.6e-17 Score=170.64 Aligned_cols=135 Identities=22% Similarity=0.282 Sum_probs=101.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...+|..||+|..+..... +....+.+|++.++.
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 55 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP-------------------------------AIRNQIIRELKVLHE 55 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCH-------------------------------HHHHHHHHHHHHHHh
Confidence 5699999999999999989999999987643211 223345566666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
++| +++.-..-+.......+++|||++|++|.++... .....++..++.+||+ .|++|+
T Consensus 56 l~h-----------~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 124 (308)
T cd06615 56 CNS-----------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHR 124 (308)
T ss_pred CCC-----------CCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEEC
Confidence 544 3332222233445678899999999999887532 1223567788999997 699999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.+|.++++|||++..+.
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (308)
T cd06615 125 DVKPSNILVNSRGEIKLCDFGVSGQLI 151 (308)
T ss_pred CCChHHEEEecCCcEEEccCCCccccc
Confidence 999999999999999999999987654
No 147
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.73 E-value=4.2e-17 Score=176.90 Aligned_cols=142 Identities=24% Similarity=0.354 Sum_probs=93.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+....... .+....+.+|+..++.
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 71 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN------------------------------VTHAKRAYRELVLMKL 71 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccC------------------------------hhHHHHHHHHHHHHHh
Confidence 6799999999999999999999999986421110 0111233455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
.+| .++.+.+ .+..+....+.....++||||++| .+.+.... ...-.++..++.+||..|++|+|+|
T Consensus 72 l~h-~~iv~~~----~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlk 145 (353)
T cd07850 72 VNH-KNIIGLL----NVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 145 (353)
T ss_pred cCC-CCCccee----eeeccCCCccccCcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 433 1111111 011111111122356899999976 55443221 1223577889999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCccccCh
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+||+++.+|.++++|||++.....
T Consensus 146 p~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 146 PSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred HHHEEECCCCCEEEccCccceeCCC
Confidence 9999999999999999999987654
No 148
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.72 E-value=9.5e-17 Score=167.18 Aligned_cols=144 Identities=22% Similarity=0.340 Sum_probs=103.7
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+.+.|..+ +.||+|++|.||+|.+..+|+.||||+....... +....
T Consensus 2 ~~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~ 48 (277)
T cd06642 2 PEELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE-------------------------------DEIED 48 (277)
T ss_pred hHHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch-------------------------------HHHHH
Confidence 34566655 5699999999999999889999999987633111 11234
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQL 336 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qL 336 (704)
+.+|+..+....| ..+...++ ........++||||++|+.|.+.... ...-.++..++.++
T Consensus 49 ~~~e~~~l~~l~h-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 117 (277)
T cd06642 49 IQQEITVLSQCDS-PYITRYYG----------SYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYL 117 (277)
T ss_pred HHHHHHHHHcCCC-CccHhhhc----------ccccCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4555555555443 22222222 22335668999999999999876431 11225677889999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+.|++|+|+||+||+++.+|.++++|||++..+..
T Consensus 118 H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 118 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred hcCCeeccCCChheEEEeCCCCEEEccccccccccC
Confidence 999999999999999999999999999999887654
No 149
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.72 E-value=8.5e-17 Score=168.64 Aligned_cols=139 Identities=15% Similarity=0.206 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||+|+||.||+|+...+|+.||||+.++.....-. .+..+.+|.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~-----------------------------------~~~~~~~~~ 45 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ-----------------------------------GETLALNER 45 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccch-----------------------------------HHHHHHHHH
Confidence 389999999999999889999999998753211000 000011111
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.- .++.. ..+++++.....+.......++||||++|++|.+.... ...-.++..++.++|+.|++|+|+
T Consensus 46 ~~-~~~~~-~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~di 123 (279)
T cd05633 46 IM-LSLVS-TGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDL 123 (279)
T ss_pred HH-HHHHh-hCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCC
Confidence 11 11111 12334444333334445678899999999999876431 112256778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccC
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
||+||+++.++.++++|||++....
T Consensus 124 kp~Nil~~~~~~~~l~dfg~~~~~~ 148 (279)
T cd05633 124 KPANILLDEHGHVRISDLGLACDFS 148 (279)
T ss_pred CHHHEEECCCCCEEEccCCcceecc
Confidence 9999999999999999999987553
No 150
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.72 E-value=4.9e-17 Score=168.23 Aligned_cols=255 Identities=15% Similarity=0.167 Sum_probs=146.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|+||+|+.+.+|+.||+|+..+.... . .+-...+.+|...++.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~--------------------------~~~~~~~~~e~~~~~~ 57 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI---K--------------------------EKKVKYVKIEKEVLTR 57 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhcc---c--------------------------hHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999997642100 0 0111233444444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
..+...+.+.++ .....+..+++|||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 58 l~~~~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~d 127 (280)
T cd05581 58 LNGHPGIIKLYY----------TFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRD 127 (280)
T ss_pred cccCCCchhHHH----------HhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 331111211111 12234577899999999999876532 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHH---HHH-hhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEA---CLH-LVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~---~~~-l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
++|+||+++.+|+++++|||++..........-... ... ....+...........++++|+... .
T Consensus 128 l~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~-----------~ 196 (280)
T cd05581 128 LKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN-----------E 196 (280)
T ss_pred CCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC-----------C
Confidence 999999999999999999999887654332100000 000 0000000000001123334433211 0
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
...+...|.|++|.++.++.. -..++..+...... +... .. ... .| ...++.++++
T Consensus 197 ~~~~~~~Di~slG~~l~~l~~--g~~p~~~~~~~~~~-~~~~-------~~--~~~-----~~-------~~~~~~~~~l 252 (280)
T cd05581 197 KPAGKSSDLWALGCIIYQMLT--GKPPFRGSNEYLTF-QKIL-------KL--EYS-----FP-------PNFPPDAKDL 252 (280)
T ss_pred CCCChhhhHHHHHHHHHHHHh--CCCCCCCccHHHHH-HHHH-------hc--CCC-----CC-------CccCHHHHHH
Confidence 112233466777777666554 23344433332211 1111 00 111 11 2347889999
Q ss_pred HHHhhhccccCCCCH----HHHHhhh
Q 005274 502 LVALLYKEGVFRIDR----LESLLTE 523 (704)
Q Consensus 502 L~~lL~~d~~~R~~r----le~Ll~~ 523 (704)
+++||..||..|++. .+.|.|+
T Consensus 253 i~~~l~~~p~~R~~~~~~~~~ll~~~ 278 (280)
T cd05581 253 IEKLLVLDPQDRLGVNEGYDELKAHP 278 (280)
T ss_pred HHHHhcCCHhhCCCcccCHHHHhcCC
Confidence 999999999999999 6666554
No 151
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.72 E-value=9.3e-17 Score=185.63 Aligned_cols=265 Identities=17% Similarity=0.175 Sum_probs=142.5
Q ss_pred CccccccccceEEEEEEccC----CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQS----GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~t----G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
.+.||+|+||.||+|++..+ |..||||........ +... .|
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~------------------------------~e- 181 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWM------------------------------NE- 181 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHH------------------------------HH-
Confidence 36899999999999999888 899999987532111 0000 00
Q ss_pred HHHHHH-hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------------------
Q 005274 270 DYKIEA-KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------- 323 (704)
Q Consensus 270 d~l~Ea-~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------- 323 (704)
...+.. .+...+...+.. +.. .......+|||||+++++|.++....
T Consensus 182 ~l~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~ 254 (566)
T PLN03225 182 RVRRACPNSCADFVYGFLE------PVS-SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLEREN 254 (566)
T ss_pred HHHhhchhhHHHHHHhhhc------ccc-cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhH
Confidence 000000 011111111110 000 12345678999999999987764210
Q ss_pred ----hHHHHHHHHHHHHHHCCccccCCCCCcEEEec-CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHH
Q 005274 324 ----LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSY-DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFV 398 (704)
Q Consensus 324 ----l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~-dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~ 398 (704)
-+-.++..+|.++|+.||+|||+||.|||++. ++.++++|||+++.+....... . ...+.
T Consensus 255 ~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~---------~------~~~~~ 319 (566)
T PLN03225 255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYI---------P------KEFLL 319 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccC---------C------ccccc
Confidence 12245677899999999999999999999986 5899999999997654221100 0 00011
Q ss_pred hcCCCCCccch----------HHHHHHHHH-HHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHh---
Q 005274 399 TLGLLPPTAEK----------EAVTKALTG-VFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAV--- 464 (704)
Q Consensus 399 slG~l~p~~d~----------~~i~~~L~~-v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~--- 464 (704)
+.+|++||.-. ......+.. +.+..++...|.|++|+++.++.. .++........+.+.+..
T Consensus 320 t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~----~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 320 DPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAF----PNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred CCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHh----CcCCCchHHHHHHHHHHhcCC
Confidence 22333333100 000000000 011112334578888888776652 112222222222222110
Q ss_pred -hhhhhhhcCCCCccccccchhHH--hhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 465 -LEGIAISSNPNYKVLGSTYPYIA--RKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 465 -lEGi~~~ldP~~~i~~~a~P~i~--r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++.......+.+ .+-+. -.++...+....+++++||.+||..|++.-+.|.|+.+
T Consensus 396 ~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff 453 (566)
T PLN03225 396 DLVAWRKLVEPRA------SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYF 453 (566)
T ss_pred cHHHHHHhhcccc------chhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCc
Confidence 000000111110 00000 01223344567799999999999999999999999987
No 152
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.72 E-value=2.3e-16 Score=162.82 Aligned_cols=252 Identities=17% Similarity=0.166 Sum_probs=152.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.|++|+||+|....+|+.||||+........- ......+..+.+.+|+..++.
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~-----------------------~~~~~~~~~~~~~~e~~~l~~ 62 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSAS-----------------------SKDRKRSMLDALAREIALLKE 62 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccc-----------------------hhHHHHHHHHHHHHHHHHHHh
Confidence 579999999999999988899999998764321100 011112333455566666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|++|.++... ...-.++..++.++|+.|++|+|
T Consensus 63 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d 131 (267)
T cd06628 63 LQH-----------ENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRD 131 (267)
T ss_pred cCC-----------CCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 544 3333222234445678899999999999876532 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
++|.||++++++.++++|||++..+....... ...........+.++++|+.-. ...++
T Consensus 132 i~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~~y~~pe~~~-----------~~~~~ 190 (267)
T cd06628 132 IKGANILVDNKGGIKISDFGISKKLEANSLST----------KTNGARPSLQGSVFWMAPEVVK-----------QTSYT 190 (267)
T ss_pred CCHHHEEEcCCCCEEecccCCCcccccccccC----------CccccccccCCCcCccChhHhc-----------cCCCC
Confidence 99999999999999999999988765321000 0000000000123344443210 01122
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..++.-+.....+.+ +.....|.+ ....+.+++++++++
T Consensus 191 ~~~Dv~slG~il~~l~~g--~~p~~~~~~~~~~~~-------~~~~~~~~~--------------~~~~~~~~~~li~~~ 247 (267)
T cd06628 191 RKADIWSLGCLVVEMLTG--KHPFPDCTQLQAIFK-------IGENASPEI--------------PSNISSEAIDFLEKT 247 (267)
T ss_pred chhhhHHHHHHHHHHhhC--CCCCCCccHHHHHHH-------HhccCCCcC--------------CcccCHHHHHHHHHH
Confidence 234667777777666542 233332222221111 011111211 124578899999999
Q ss_pred hhccccCCCCHHHHHhhhh
Q 005274 506 LYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 506 L~~d~~~R~~rle~Ll~~~ 524 (704)
|..||..|.+..+.+-|+.
T Consensus 248 l~~~p~~Rp~~~~il~~~~ 266 (267)
T cd06628 248 FEIDHNKRPTAAELLKHPF 266 (267)
T ss_pred ccCCchhCcCHHHHhhCCC
Confidence 9999999999888776653
No 153
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.72 E-value=1.5e-16 Score=170.71 Aligned_cols=133 Identities=15% Similarity=0.141 Sum_probs=97.6
Q ss_pred ccccc--ccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAA--SLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 196 PIgsG--S~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.||.| ++|.||+|+.+.+|+.||||+.+.... -++....+.+|+..++
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~------------------------------~~~~~~~~~~e~~~l~ 54 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC------------------------------TNEMVTFLQGELHVSK 54 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhc------------------------------cHHHHHHHHHHHHHHH
Confidence 57888 789999999999999999999763211 0122233445555544
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
..+| ++|.-..-++...+..++||||++|+++.++... ...-.++..++.+||+.|++
T Consensus 55 ~l~h-----------pniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 123 (327)
T cd08227 55 LFNH-----------PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYV 123 (327)
T ss_pred hcCC-----------CCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 4433 4544333345556778999999999999887532 11225677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
|+|+||.||+++.+|++++.|||....
T Consensus 124 H~dlkp~Nil~~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 124 HRSVKASHILISVDGKVYLSGLRSNLS 150 (327)
T ss_pred cCCCChhhEEEecCCcEEEcccchhhc
Confidence 999999999999999999999986544
No 154
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.72 E-value=2.6e-16 Score=160.80 Aligned_cols=134 Identities=19% Similarity=0.205 Sum_probs=96.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.+. ++..||+|+.+..... +....+.+|++.++.
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 48 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQ-------------------------------ELKIKFLSEARILKQ 48 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCH-------------------------------HHHHHHHHHHHHHHh
Confidence 36899999999999975 7999999997754321 111223344443333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------h--hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------Y--LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~--l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+ ++++.-...+....+..++||||++|++|.+.... . ..-.++..++.++|+.|++|+
T Consensus 49 l~-----------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~ 117 (250)
T cd05085 49 YD-----------HPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHR 117 (250)
T ss_pred CC-----------CCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 22 24443333344455678999999999999876431 0 112456678899999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.++.++++|||++....
T Consensus 118 dl~p~nili~~~~~~~l~d~g~~~~~~ 144 (250)
T cd05085 118 DLAARNCLVGENNVLKISDFGMSRQED 144 (250)
T ss_pred ccChheEEEcCCCeEEECCCccceecc
Confidence 999999999999999999999987543
No 155
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.71 E-value=2.1e-17 Score=170.99 Aligned_cols=143 Identities=17% Similarity=0.298 Sum_probs=100.2
Q ss_pred ChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHH
Q 005274 184 PIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWAS 263 (704)
Q Consensus 184 ~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~ 263 (704)
+++..|... +.||.|++|+||+|+.+.+++.||||+....-.. ..
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---------------------------------~~ 47 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---------------------------------EE 47 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---------------------------------HH
Confidence 456667655 5699999999999999989999999997532100 01
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCCccee-eceeeee-----cccceeEEEEeccCCChhhHHhh-----------hhHH
Q 005274 264 SLFRELDYKIEAKNGLKFRQLYGGIQDVL-IPEMYVE-----QTTRKVLIMEWVEGQKLSEVKDL-----------YLIE 326 (704)
Q Consensus 264 ~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~e-----~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e 326 (704)
.+..|+..+.... +++++. +...+.. .....+++|||+.|++|.++... ....
T Consensus 48 ~~~~e~~~l~~~~----------~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~ 117 (272)
T cd06637 48 EIKQEINMLKKYS----------HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 117 (272)
T ss_pred HHHHHHHHHHHhc----------CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHH
Confidence 2334444433332 123322 1122211 12357899999999999886432 1123
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++..++.+||+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 118 ~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 118 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred HHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 577888999999999999999999999999999999999987654
No 156
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.5e-17 Score=172.83 Aligned_cols=236 Identities=22% Similarity=0.302 Sum_probs=150.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|.||.|-.++-+.+|+.+|+|+.++.+. |.. +|.+. ...|-..++.
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iak--------------------------dEVAH-TlTE~RVL~~ 224 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAK--------------------------DEVAH-TLTENRVLQN 224 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhhe--eeh--------------------------HHhhh-hhhHHHHHHh
Confidence 679999999999999999999999999886431 111 12221 2223233333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH---------hhhhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK---------DLYLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~---------~~~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| |.+...+.-.+...+.+.||||..|+.|.--. +.++....+.++|.|||+.+|+.||
T Consensus 225 ~~H-----------PFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRD 293 (516)
T KOG0690|consen 225 CRH-----------PFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRD 293 (516)
T ss_pred ccC-----------cHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeee
Confidence 333 22222333344567889999999999886432 1256667888999999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc-Ch-hHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF-KE-ELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l-~~-~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|-+|+|++.||+||+.|||++++- +. ....+||+ +..++.|++-.+ +-
T Consensus 294 lKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCG------------------TPEYLAPEVleD-----------nD 344 (516)
T KOG0690|consen 294 LKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCG------------------TPEYLAPEVLED-----------ND 344 (516)
T ss_pred chhhhheeccCCceEeeecccchhcccccceeccccC------------------ChhhcCchhhcc-----------cc
Confidence 9999999999999999999999862 11 11122222 222333332111 23
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChh---HHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSY---FSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKS 500 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~---~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~ 500 (704)
|+..+++|-+|.++.+++.. ++|=+ ...++ -++..| +.++ | ...||+++.
T Consensus 345 YgraVDWWG~GVVMYEMmCG------RLPFyn~dh~kLF-eLIl~e--------d~kF-----P-------r~ls~eAkt 397 (516)
T KOG0690|consen 345 YGRAVDWWGVGVVMYEMMCG------RLPFYNKDHEKLF-ELILME--------DLKF-----P-------RTLSPEAKT 397 (516)
T ss_pred ccceeehhhhhHHHHHHHhc------cCcccccchhHHH-HHHHhh--------hccC-----C-------ccCCHHHHH
Confidence 45556666666555554431 23311 11111 111222 2222 2 467999999
Q ss_pred HHHHhhhccccCCC-----CHHHHHhhhhHH
Q 005274 501 SLVALLYKEGVFRI-----DRLESLLTESLR 526 (704)
Q Consensus 501 lL~~lL~~d~~~R~-----~rle~Ll~~~~~ 526 (704)
+|..+|.+||++|. ++.|-+-|..|+
T Consensus 398 LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~ 428 (516)
T KOG0690|consen 398 LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA 428 (516)
T ss_pred HHHHHhhcChHhhcCCCchhHHHHHhhhhhc
Confidence 99999999999997 567777777663
No 157
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.71 E-value=1.4e-16 Score=164.61 Aligned_cols=134 Identities=21% Similarity=0.284 Sum_probs=99.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||+|+.+...... ...+.+|+..++.
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~--------------------------------~~~~~~e~~~l~~ 62 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD--------------------------------FSLIQQEIFMVKE 62 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccch--------------------------------HHHHHHHHHHHHh
Confidence 57999999999999998899999999986432110 0123445555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......++||||++|++|.+.... ...-.++..++.++|+.|++|+|
T Consensus 63 ~~h-----------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (267)
T cd06646 63 CKH-----------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRD 131 (267)
T ss_pred cCC-----------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 443 3333222233345677899999999999876421 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++|+||+++.+|.++++|||++..+.
T Consensus 132 l~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 132 IKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred CCHHHEEECCCCCEEECcCccceeec
Confidence 99999999999999999999998764
No 158
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=1.1e-16 Score=165.63 Aligned_cols=180 Identities=22% Similarity=0.296 Sum_probs=120.7
Q ss_pred ccccccccceEEEEE-EccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhc---cCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQAR-LRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKF---NTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~-lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~---~~dl~~ivde~~~~l~~Eld 270 (704)
++||+|++|+||+|+ ...+|+.||||+.+++.......+- +......+ ..+.. .+.. ..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~~~------~~ 96 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDGDFRFKYRKINPR---KLVR------LW 96 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hcccchhhccCCCCHH---HHHH------HH
Confidence 589999999999999 5569999999999875432110000 00000000 00010 0111 12
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh--h-------hhHHHHHHHHHHHHHHCC-
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD--L-------YLIEVGVYCSFNQLLEKG- 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~--~-------~l~e~~v~~~L~qLh~~G- 340 (704)
+..|++++.++.+ ..+.+|+++.. +..+|||||++|..+..... . .-.-.++..++.++|..|
T Consensus 97 ~~~E~~~L~~L~~-----~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~ 169 (237)
T smart00090 97 AEKEFRNLQRLYE-----AGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGE 169 (237)
T ss_pred HHHHHHHHHHHHh-----cCCCCCeeeEe--cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 3456666655543 24667777643 45699999999977754321 0 112356778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCc
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPT 406 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~ 406 (704)
++|+|+||+||+++ +++++++|||++......... ++..+|...+...+-++|+....
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~~~ 227 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMAL-------EFLERDIRNIIRFFRRKGVDELD 227 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhccCCcchH-------HHHHHHHHHHHHHHHHcCCCcCC
Confidence 99999999999999 899999999999987776543 34778888888888888885443
No 159
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=1.6e-16 Score=159.13 Aligned_cols=159 Identities=17% Similarity=0.164 Sum_probs=104.6
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhh--HHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAA--ISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~--i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
.++||+|++|+||+|..+ +|+.||||+.+++.... ...+... ... ................|...
T Consensus 20 ~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~E~~~ 86 (198)
T cd05144 20 GNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDY-------LGD-----RKHASWLYLSRLAAQKEFAA 86 (198)
T ss_pred CCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHH-------Hhc-----cccchhHHHhHHHHHHHHHH
Confidence 368999999999999986 89999999987653110 0000000 000 00001111122223333333
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-h--hhHHHHHHHHHHHHHHCCccccCCCC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-L--YLIEVGVYCSFNQLLEKGFYHADPHP 348 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-~--~l~e~~v~~~L~qLh~~G~~H~DphP 348 (704)
+ ..+.. .++.+|.++. ....++||||++|.++.+... . .....++...+.++|..|++|+|+||
T Consensus 87 l------~~l~~-----~~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p 153 (198)
T cd05144 87 L------KALYE-----EGFPVPKPID--WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSE 153 (198)
T ss_pred H------HHHHH-----cCCCCCceee--cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCc
Confidence 3 33322 2345666664 356699999999998877643 1 11224566778899999999999999
Q ss_pred CcEEEecCCcEEEEecCCccccChhHHHHH
Q 005274 349 GNLFRSYDGKLAYIDFGMMGEFKEELREGF 378 (704)
Q Consensus 349 gNILv~~dG~l~liDFGl~~~l~~~~r~~~ 378 (704)
+||+++.+++++++|||++..++.+.+..+
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~~~~~~~~ 183 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTDHPNAEEL 183 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCCCccHHHH
Confidence 999999999999999999999888776654
No 160
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.71 E-value=4.2e-17 Score=172.99 Aligned_cols=136 Identities=25% Similarity=0.354 Sum_probs=95.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||+|+.+..... ++......+|+..+++
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 62 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER------------------------------DGIPISSLREITLLLN 62 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC------------------------------CCCcchhhHHHHHHHh
Confidence 4699999999999999989999999997632111 0111123346666655
Q ss_pred HhhHHHHHHHhcCCcce-eeceeeeec-ccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDV-LIPEMYVEQ-TTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V-~vP~v~~e~-ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++ .+...+.+. .+..++||||+++ ++.++... ...-.++..++.+||+.|++
T Consensus 63 l~h-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 130 (309)
T cd07845 63 LRH-----------PNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII 130 (309)
T ss_pred CCC-----------CCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 544 222 222222222 2457899999976 55544321 11235777889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+|++|+||+++.+|.++++|||++..+..
T Consensus 131 H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 131 HRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999999999999999999999999887653
No 161
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.71 E-value=5.6e-17 Score=170.48 Aligned_cols=139 Identities=23% Similarity=0.322 Sum_probs=99.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|..+.+|+.||||+.+...... ..++....+..|++.+++
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------~~~~~~~~~~~e~~~l~~ 58 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE---------------------------AKDGINFTALREIKLLQE 58 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccc---------------------------ccchhhHHHHHHHHHHhh
Confidence 46999999999999998899999999987542110 001222344456665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||+ +++|.++... ...-.++..++.+||+.|++|+
T Consensus 59 ~~h-----------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~ 126 (298)
T cd07841 59 LKH-----------PNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHR 126 (298)
T ss_pred cCC-----------CCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 544 22222222333356789999999 7788776432 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|++|+||+++.+|.++++|||++..+..
T Consensus 127 dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 127 DLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred CCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999999999999999999999887643
No 162
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.71 E-value=8.2e-18 Score=174.10 Aligned_cols=148 Identities=18% Similarity=0.293 Sum_probs=101.3
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDE 260 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde 260 (704)
++.+|.+---.-||+|.+|.||+|.-+.++. .+|+|..+-. .| -+.
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~--------------------------kd----~tG 69 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGE--------------------------KD----GTG 69 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhcc--------------------------CC----CCC
Confidence 3455544333569999999999997654432 4676654311 01 123
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhH---H
Q 005274 261 WASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLI---E 326 (704)
Q Consensus 261 ~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~---e 326 (704)
+..+..+|+.+.+|.+|. ++. ..-+|+.......+|+.||.+. +|.++... .++ -
T Consensus 70 iS~SAcREiaL~REl~h~-nvi---------~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsil 138 (438)
T KOG0666|consen 70 ISMSACREIALLRELKHP-NVI---------SLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSIL 138 (438)
T ss_pred cCHHHHHHHHHHHHhcCC-cch---------hHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHH
Confidence 445678999999999872 221 1223333445667899999975 55555321 122 2
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecC----CcEEEEecCCccccChh
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~d----G~l~liDFGl~~~l~~~ 373 (704)
-++..++.|||++=++|||+||.|||++.| |++||.|+|+++.+...
T Consensus 139 wQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~p 189 (438)
T KOG0666|consen 139 WQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNP 189 (438)
T ss_pred HHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcc
Confidence 567788999999999999999999999988 99999999999876654
No 163
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.71 E-value=9.9e-17 Score=176.13 Aligned_cols=240 Identities=15% Similarity=0.115 Sum_probs=143.3
Q ss_pred CccccccccceEEEEEE-----ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARL-----RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~l-----k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
.+.||+|+||.||+|+. ..++..||||+.++.... .....+.+|
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-------------------------------~~~~~~~~E 88 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-------------------------------TEREALMSE 88 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-------------------------------HHHHHHHHH
Confidence 36899999999999974 235778999998754211 011234455
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------------------
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------- 323 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------- 323 (704)
+..+..+. ++++|.-..-+....+..++||||++|++|.++....
T Consensus 89 i~il~~l~----------~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (375)
T cd05104 89 LKVLSYLG----------NHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQR 158 (375)
T ss_pred HHHHHHhc----------CCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhh
Confidence 55554442 2344443333445567789999999999987664210
Q ss_pred -----------------------------------------------------------hHHHHHHHHHHHHHHCCcccc
Q 005274 324 -----------------------------------------------------------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 324 -----------------------------------------------------------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
-.-.++..++.+||+.|++|+
T Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 238 (375)
T cd05104 159 EMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHR 238 (375)
T ss_pred cccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 011467788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||.||+++.++.++++|||++..+........ .+.. ....++++|+.-. ...+
T Consensus 239 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~--------~~~~------~~~~~y~aPE~~~-----------~~~~ 293 (375)
T cd05104 239 DLAARNILLTHGRITKICDFGLARDIRNDSNYVV--------KGNA------RLPVKWMAPESIF-----------NCVY 293 (375)
T ss_pred CCchhhEEEECCCcEEEecCccceeccCcccccc--------cCCC------CCCcceeChhHhc-----------CCCC
Confidence 9999999999999999999999886643221100 0000 0012344444211 1123
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.+++.. ...++.--+.-..+.+.+. ++ +... .| ...++++++++..
T Consensus 294 ~~~sDi~slG~~l~ellt~-g~~p~~~~~~~~~~~~~~~--~~--------~~~~---~~-------~~~~~~l~~li~~ 352 (375)
T cd05104 294 TFESDVWSYGILLWEIFSL-GSSPYPGMPVDSKFYKMIK--EG--------YRML---SP-------ECAPSEMYDIMKS 352 (375)
T ss_pred CCCCCHHHHHHHHHHHHhc-CCCCCCCCCchHHHHHHHH--hC--------ccCC---CC-------CCCCHHHHHHHHH
Confidence 3445777888777766541 1122211011111111110 11 1100 01 1246789999999
Q ss_pred hhhccccCCCCHHHHH
Q 005274 505 LLYKEGVFRIDRLESL 520 (704)
Q Consensus 505 lL~~d~~~R~~rle~L 520 (704)
++..||..|++.-+-+
T Consensus 353 cl~~dP~~RPs~~eil 368 (375)
T cd05104 353 CWDADPLKRPTFKQIV 368 (375)
T ss_pred HccCChhHCcCHHHHH
Confidence 9999999999866543
No 164
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.71 E-value=1.6e-16 Score=165.64 Aligned_cols=144 Identities=19% Similarity=0.275 Sum_probs=101.4
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+++.|..+ +.||+|++|+||+|+.+.+|+.||||+....... .....
T Consensus 2 ~~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~ 48 (277)
T cd06640 2 PEELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-------------------------------DEIED 48 (277)
T ss_pred hHHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-------------------------------HHHHH
Confidence 34555555 5699999999999999888999999987522100 11123
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-h-------hHHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-Y-------LIEVGVYCSFNQL 336 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~-------l~e~~v~~~L~qL 336 (704)
+.+|+..+....| +++.-..-........++||||++|++|.+.... . ..-.++..++.++
T Consensus 49 ~~~e~~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~l 117 (277)
T cd06640 49 IQQEITVLSQCDS-----------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYL 117 (277)
T ss_pred HHHHHHHHHhCCC-----------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3334443333222 3333332333445678999999999999886432 1 1124667789999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+.|++|+|++|+||+++.++.++++|||++..+..
T Consensus 118 h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 118 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 153 (277)
T ss_pred HhCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence 999999999999999999999999999999876644
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.71 E-value=4.1e-16 Score=159.41 Aligned_cols=238 Identities=16% Similarity=0.129 Sum_probs=146.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|+.|++|........ +.....+..|+..++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN------------------------------RREREEAIDEARVLAK 55 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC------------------------------HHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999987532100 0111233344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+.......+++|||++|++|.++.... -.-.++..++.+||+.|++|
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h 124 (256)
T cd08529 56 LDS-----------SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILH 124 (256)
T ss_pred cCC-----------CCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 333 33332222334456789999999999998864321 11246777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||.||+++.++.++++|||++..+....... . ....+.++.+|+.-.. ..
T Consensus 125 ~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~--~--------------~~~~~~~y~aPE~~~~-----------~~ 177 (256)
T cd08529 125 RDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA--N--------------TIVGTPYYLSPELCED-----------KP 177 (256)
T ss_pred CCCCcceEEEeCCCCEEEcccccceeccCccchh--h--------------ccccCccccCHHHhcC-----------CC
Confidence 9999999999999999999999988765432110 0 0001123444432110 11
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
.+...|.|++|.++.++.. -..++....... ..+.. .++ .-|.+ ....+++++++++
T Consensus 178 ~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~-~~~~~--~~~----~~~~~--------------~~~~~~~~~~~i~ 234 (256)
T cd08529 178 YNEKSDVWALGVVLYECCT--GKHPFDANNQGA-LILKI--IRG----VFPPV--------------SQMYSQQLAQLID 234 (256)
T ss_pred CCCccchHHHHHHHHHHHh--CCCCCCCCCHHH-HHHHH--HcC----CCCCC--------------ccccCHHHHHHHH
Confidence 2234566777777766654 223333222211 11111 111 11110 1135678999999
Q ss_pred HhhhccccCCCCHHHHHhhh
Q 005274 504 ALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~ 523 (704)
+++..+|..|++..+-+.|+
T Consensus 235 ~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred HHccCCcccCcCHHHHhhCC
Confidence 99999999999988877664
No 166
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.71 E-value=4.7e-16 Score=168.41 Aligned_cols=141 Identities=24% Similarity=0.312 Sum_probs=95.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|....+|+.||||+...+.... .....+.+|+..+..
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~Ei~~l~~ 72 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI------------------------------IHAKRTYRELRLLKH 72 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh------------------------------HHHHHHHHHHHHHHH
Confidence 68999999999999998899999999986432110 111234456665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| .++.+.+ .+..+....+.....+++++++ |+.|.+.... ...-.++..++.+||+.|++|+|+
T Consensus 73 l~h-~~iv~~~----~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dl 146 (345)
T cd07877 73 MKH-ENVIGLL----DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDL 146 (345)
T ss_pred cCC-Cccccee----eeeeecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 544 1111111 1111111112234567899987 6677665321 112357778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccC
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
||+||+++.+|.++++|||++....
T Consensus 147 kp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 147 KPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred ChHHEEEcCCCCEEEeccccccccc
Confidence 9999999999999999999987654
No 167
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.71 E-value=2.7e-16 Score=162.27 Aligned_cols=250 Identities=16% Similarity=0.122 Sum_probs=146.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||+||+|... +|+.||||..+...... ....+....+.+|++.++.
T Consensus 6 ~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~--------------------------~~~~~~~~~~~~e~~~l~~ 58 (265)
T cd06631 6 EVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNV--------------------------LAAEKEYEKLQEEVDLLKS 58 (265)
T ss_pred ceEeccCCeEEEEEEEc-CCCeEEEEEeecCccch--------------------------hhHHHHHHHHHHHHHHHHh
Confidence 57999999999999875 89999999876432110 0011222345556555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--h-------hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--Y-------LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~-------l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|++|.++... . ..-.++..++.++|+.|++|+|
T Consensus 59 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 127 (265)
T cd06631 59 LKH-----------VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRD 127 (265)
T ss_pred cCC-----------CCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 443 3433323333445678999999999999887532 1 1125677789999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
++|+||+++++|.++++|||++..+........ .... ......+.++++|+.-.. ..++
T Consensus 128 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~pe~~~~-----------~~~~ 186 (265)
T cd06631 128 IKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT-------HSNM---LKSMHGTPYWMAPEVINE-----------SGYG 186 (265)
T ss_pred cCHHhEEECCCCeEEeccchhhHhhhhcccccc-------cccc---ccccCCCccccChhhhcC-----------CCCc
Confidence 999999999999999999999875432100000 0000 000011234444442110 1112
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..++.......... .... .....|. +....++++.++++++
T Consensus 187 ~~~Dv~slG~~~~~l~~g--~~p~~~~~~~~~~~-~~~~----~~~~~~~--------------~~~~~~~~~~~~i~~~ 245 (265)
T cd06631 187 RKSDIWSIGCTVFEMATG--KPPLASMDRLAAMF-YIGA----HRGLMPR--------------LPDSFSAAAIDFVTSC 245 (265)
T ss_pred chhhHHHHHHHHHHHHhC--CCccccCChHHHHH-Hhhh----ccCCCCC--------------CCCCCCHHHHHHHHHH
Confidence 234556666666555542 12222111111111 0000 0011111 1134678899999999
Q ss_pred hhccccCCCCHHHHHhhhh
Q 005274 506 LYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 506 L~~d~~~R~~rle~Ll~~~ 524 (704)
|..||..|.+.-+-|.|+.
T Consensus 246 l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 246 LTRDQHERPSALQLLRHDF 264 (265)
T ss_pred hcCCcccCCCHHHHhcCCC
Confidence 9999999999888777653
No 168
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.71 E-value=1.3e-16 Score=166.83 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=149.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+...+|+.||+|+.+..... .-...+.+|++.++.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDE-------------------------------SKFNQIIMELDILHK 55 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCH-------------------------------HHHHHHHHHHHHHHh
Confidence 4699999999999999889999999987532111 111345567777766
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----hh-------HHHHHHHHHHHHHH-CCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----YL-------IEVGVYCSFNQLLE-KGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----~l-------~e~~v~~~L~qLh~-~G~ 341 (704)
.+| .++.+.++. ....+..++||||++|+.|..+... .+ .-.++..++.+||+ .|+
T Consensus 56 ~~~-~~i~~~~~~----------~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i 124 (286)
T cd06622 56 AVS-PYIVDFYGA----------FFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI 124 (286)
T ss_pred cCC-CcHHhhhhh----------eecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 654 233333221 1224567899999999999876432 11 12466778899996 699
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
+|+|++|.||+++.++.++++|||++..+....... .....++++|+.-..... -..
T Consensus 125 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------~~~~~~y~aPE~~~~~~~-----~~~ 181 (286)
T cd06622 125 IHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT------------------NIGCQSYMAPERIKSGGP-----NQN 181 (286)
T ss_pred eeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc------------------CCCccCccCcchhcCCCC-----Ccc
Confidence 999999999999999999999999987653221100 001223444442100000 000
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
..++...|.|++|.++.++... ..++.-.. .......+ +.+.....|. +..+.+++++++
T Consensus 182 ~~~~~~~DiwslG~il~~l~~g--~~pf~~~~-~~~~~~~~---~~~~~~~~~~--------------~~~~~~~~~~~l 241 (286)
T cd06622 182 PTYTVQSDVWSLGLSILEMALG--RYPYPPET-YANIFAQL---SAIVDGDPPT--------------LPSGYSDDAQDF 241 (286)
T ss_pred CCCCcccchHhHHHHHHHHHhC--CCCCCCcc-hhhHHHHH---HHHhhcCCCC--------------CCcccCHHHHHH
Confidence 0122345677777777666532 22221111 11111111 1111000011 123468899999
Q ss_pred HHHhhhccccCCCCHHHHHhhhhH
Q 005274 502 LVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++|.++|..|++.-+-+.|+.+
T Consensus 242 i~~~l~~~p~~Rp~~~~l~~~~~~ 265 (286)
T cd06622 242 VAKCLNKIPNRRPTYAQLLEHPWL 265 (286)
T ss_pred HHHHcccCcccCCCHHHHhcChhh
Confidence 999999999999998877777765
No 169
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.71 E-value=4.3e-16 Score=167.38 Aligned_cols=302 Identities=18% Similarity=0.207 Sum_probs=161.4
Q ss_pred ccccccccceEEEEEEccC--CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS--GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t--G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||+|++|.||+|+...+ |..||||+.+...... ...+...+|++.+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~E~~~l 55 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK------------------------------ILAKRALRELKLL 55 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc------------------------------hhHHHHHHHHHHH
Confidence 4699999999999999877 8999999876322110 1123344555555
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
+..++...+.+.+. ............+++|||+.+ .|.+.... ...-.++..++.+||+.|++|
T Consensus 56 ~~l~~h~~iv~~~~------~~~~~~~~~~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH 128 (332)
T cd07857 56 RHFRGHKNITCLYD------MDIVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLH 128 (332)
T ss_pred HHhcCCCChheeee------eeeeccccCCcEEEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 54432222222111 011111222456899999964 56554321 122367888999999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHH----------HHHHHHHhh-ccChhHHHHHHHhcCCCCCccchHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG----------FIEACLHLV-NRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~----------~~~~~~~l~-~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
+|+||+||+++.+|.++++|||++..+....... .....+... .........|+|++|++
T Consensus 129 ~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~--------- 199 (332)
T cd07857 129 RDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI--------- 199 (332)
T ss_pred CCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH---------
Confidence 9999999999999999999999988665321100 000112211 11222344566666653
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
+..++.. .......+...++..+... .+...+..+..+... .. ......+. ...+........
T Consensus 200 ---l~~l~~g--~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~-------~~~~~~~~~~~~ 262 (332)
T cd07857 200 ---LAELLGR--KPVFKGKDYVDQLNQILQV---LGTPDEETLSRIGSP-KA-QNYIRSLP-------NIPKKPFESIFP 262 (332)
T ss_pred ---HHHHHhC--CcCCCCCCHHHHHHHHHHH---hCCCCHHHHHhhhhh-hH-HHHHHhcc-------ccCCcchHhhCC
Confidence 1112211 0111112211222222111 111111111100000 00 00000000 000001112334
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhHHHHHHHhhhhcccCCcchhHhHHHHHhhhccccc--hhHHHHHHHH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESLRARTEKALVKKQTEDTDSRLITKEILSFTLTEKG--AFVREILLQE 569 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~g--~~~r~~l~~e 569 (704)
..++.+++++.++|..||..|++.-+.+.|+.++.. ++....+.......|.|.++. +.+|+.+.+|
T Consensus 263 ~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (332)
T cd07857 263 NANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW----------HDPDDEPVCQKPFDFSFESEDSMEELRDMIIEE 331 (332)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh----------cCccccccccccccCCccccccHHHHHHHHhhc
Confidence 568899999999999999999999999989877322 233333444445556666555 6777777765
No 170
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.70 E-value=4.1e-16 Score=159.99 Aligned_cols=136 Identities=20% Similarity=0.224 Sum_probs=99.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+++.+.+|+.||+|..+..... ...+.+..|+..+..
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 54 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-------------------------------SAVEDSRKEAVLLAK 54 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-------------------------------HHHHHHHHHHHHHHh
Confidence 5799999999999999999999999987522100 011233344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-..+..+..+++|||++|+++.+.... ...-.++..++.++|+.|++|
T Consensus 55 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H 123 (255)
T cd08219 55 MKH-----------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLH 123 (255)
T ss_pred CCC-----------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 333 4443333345566788999999999988775321 111256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|.||+++.+|.++++|||++.....
T Consensus 124 ~dl~p~nili~~~~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 124 RDIKSKNIFLTQNGKVKLGDFGSARLLTS 152 (255)
T ss_pred CCCCcceEEECCCCcEEEcccCcceeecc
Confidence 99999999999999999999999876643
No 171
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.70 E-value=2.4e-16 Score=165.18 Aligned_cols=133 Identities=21% Similarity=0.311 Sum_probs=96.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+.+.+|+.||||..+...... ......+|+++++.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~~~~~~E~~~l~~ 59 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-------------------------------APFTAIREASLLKD 59 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-------------------------------CchhHHHHHHHHhh
Confidence 68999999999999998899999999986432110 00122345555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||++| +|.++... ...-.++..++.+||+.|++|+
T Consensus 60 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~ 127 (291)
T cd07844 60 LKH-----------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHR 127 (291)
T ss_pred CCC-----------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 443 3444333344455678899999986 67665321 1122467788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCcccc
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|++|.||+++.+|.++++|||++...
T Consensus 128 dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 128 DLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred cCCHHHEEEcCCCCEEECcccccccc
Confidence 99999999999999999999998654
No 172
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.70 E-value=1.5e-16 Score=163.72 Aligned_cols=137 Identities=23% Similarity=0.323 Sum_probs=93.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+.+.+|+.||||+.+...... ..... ++..|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~~------~~~~e 46 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-----------------------------KNQVT------NVKAE 46 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-----------------------------HHHHH------HHHHH
Confidence 57999999999999998899999999976321000 00000 11111
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
... .....+++++.-...+.+.....+++|||++|++|.++... ...-.++..++.++|+.|++|+|
T Consensus 47 ~~~----~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d 122 (260)
T cd05611 47 RAI----MMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD 122 (260)
T ss_pred HHH----HhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 111 01111234432222233345678999999999999887532 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l 370 (704)
++|.||+++.++.++++|||++...
T Consensus 123 l~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 123 IKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred CCHHHeEECCCCcEEEeecccceec
Confidence 9999999999999999999987654
No 173
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.70 E-value=1.3e-16 Score=181.99 Aligned_cols=279 Identities=18% Similarity=0.201 Sum_probs=143.6
Q ss_pred ccccccccceEEEEEEccC-CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+.||+|+||.||+|+++.. ++.+++|........ .....+.++..+. ........+.+|+..++
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~k~~~-----------~~~~~~~~~~~Ei~il~ 218 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQG----KPKCERLIAKRVK-----------AGSRAAIQLENEILALG 218 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhcccccccc----chhhhhhHhHHhh-----------cchHHHHHHHHHHHHHH
Confidence 5699999999999987643 333444422211100 0111111111100 01122334455555555
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH-h-------------hhhHHHHHHHHHHHHHHC
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK-D-------------LYLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~-~-------------~~l~e~~v~~~L~qLh~~ 339 (704)
..+| ++|.--.-+.+.....+++||++.+. +.++. . ...+-.++..+|.+||+.
T Consensus 219 ~l~H-----------pnIv~l~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~ 286 (501)
T PHA03210 219 RLNH-----------ENILKIEEILRSEANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK 286 (501)
T ss_pred hCCC-----------CCcCcEeEEEEECCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 4443 34332233445566788999998653 33321 1 011235777899999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHH---HHH----HHHHHhhccChhHHHHHHHhcCCCCCccchHHH
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE---GFI----EACLHLVNRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~---~~~----~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
||+|||+||+|||++.+|.++|+|||++..+...... .+. ...+.++.+..+....|+|++|++
T Consensus 287 gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi--------- 357 (501)
T PHA03210 287 KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI--------- 357 (501)
T ss_pred CeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH---------
Confidence 9999999999999999999999999999876543211 111 112333444444456677777764
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhh---cCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhh
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYK---FKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARK 489 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~---~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ 489 (704)
+.+++...+. +... +-+....++...+.. ....+|.....+..-+ +... +.-.....|-..+.
T Consensus 358 ---l~ell~~~~~-p~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i---~~~~------~~~~~~~~~~~~~~ 423 (501)
T PHA03210 358 ---LLDMLSHDFC-PIGD-GGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYI---DSAE------IDHAGHSVPPLIRN 423 (501)
T ss_pred ---HHHHHHCCCC-CccC-CCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHh---hhhh------cccCccchhhHHHh
Confidence 2222221100 0000 000011111111111 1112232221111111 1100 00000011111111
Q ss_pred hccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 490 VLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 490 ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...++++.+++.+||.+||..|+++.|.|-|+.|
T Consensus 424 --~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 424 --LGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred --cCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 1356778999999999999999999999999887
No 174
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.70 E-value=1.9e-16 Score=165.12 Aligned_cols=238 Identities=16% Similarity=0.146 Sum_probs=142.1
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|++|.||+|..+.+|+.||||+........ ......+..|+..++..+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~l~ 51 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK-----------------------------RKGEQMALNEKKILEKVS 51 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh-----------------------------hhhhHHHHHHHHHHHhCC
Confidence 689999999999998899999999976421100 001112233443333332
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----hh-------HHHHHHHHHHHHHHCCccccC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----YL-------IEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~l-------~e~~v~~~L~qLh~~G~~H~D 345 (704)
++++.-...+.+.....+++|||++|++|.+.... .+ .-.++..++.++|+.|++|+|
T Consensus 52 -----------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 52 -----------SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred -----------CCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 24443333344455678999999999999876421 11 124677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
++|.||+++.++.++++|||.+.......... .......+.+|+.-. ...++
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~-----------------~~~~~~~y~~PE~~~-----------~~~~~ 172 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGKKIK-----------------GRAGTPGYMAPEVLQ-----------GEVYD 172 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCCccc-----------------cccCCCCcCCHHHhc-----------CCCCC
Confidence 99999999999999999999887543211000 000112333333210 01112
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChh---HHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSY---FSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~---~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
...|.|++|.++.++... +.++.-... ...+. +.+ ...... +....++++++++
T Consensus 173 ~~~Di~slG~il~~l~~g--~~p~~~~~~~~~~~~~~------~~~-~~~~~~--------------~~~~~~~~~~~li 229 (277)
T cd05577 173 FSVDWFALGCTLYEMIAG--RSPFRQRKEKVEKEELK------RRT-LEMAVE--------------YPDKFSPEAKDLC 229 (277)
T ss_pred chhhhHHHHHHHHHHhhC--CCCCCCCcccccHHHHH------hcc-cccccc--------------CCccCCHHHHHHH
Confidence 234556666665555431 222221111 11010 000 000000 1134588999999
Q ss_pred HHhhhccccCCC-----CHHHHHhhhhH
Q 005274 503 VALLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 503 ~~lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
++||..||..|+ ++.+.+.|+.+
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~ll~h~~~ 257 (277)
T cd05577 230 EALLQKDPEKRLGCRGGSADEVREHPLF 257 (277)
T ss_pred HHHccCChhHccCCCcccHHHHHhChhh
Confidence 999999999999 77777778766
No 175
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.70 E-value=9.7e-17 Score=170.53 Aligned_cols=214 Identities=21% Similarity=0.263 Sum_probs=152.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|+|.||.|-+|+.+..|+.||||.++.+-.+. ..| + -.+.+|+.++.-
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqD--------------------l--------vhIRREIeIMSs 109 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQD--------------------L--------VHIRREIEIMSS 109 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHH--------------------H--------HHHHHHHHHHhh
Confidence 56999999999999998899999999988542110 011 1 245677777666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hhHH-------HHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YLIE-------VGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l~e-------~~v~~~L~qLh~~G~~H~D 345 (704)
++| |+|.--.-+++-..+.|+||||..|+.|.|+... .+.+ .++.+++.|+|.++++|||
T Consensus 110 LNH-----------PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRD 178 (668)
T KOG0611|consen 110 LNH-----------PHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRD 178 (668)
T ss_pred cCC-----------CceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecc
Confidence 655 4444333345567889999999999999998542 3333 5667778888999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh-hHHHHHHH----HHHHhhccC-hhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE-ELREGFIE----ACLHLVNRD-FDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~-~~r~~~~~----~~~~l~~~d-~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+|-+|||++.++.++|.|||++-.+.. .+-.+||+ +.+.++|+. |.+...|.|++|++ |..+
T Consensus 179 LKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvL------------LYtL 246 (668)
T KOG0611|consen 179 LKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVL------------LYTL 246 (668)
T ss_pred cchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHH------------HHHH
Confidence 999999999999999999999876644 34555655 334466654 55666777888765 2222
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLA 463 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~ 463 (704)
. +-+.+++..++..+..++....|.-|- -|..-.-+||-++
T Consensus 247 V--yGtMPFDG~Dhk~lvrQIs~GaYrEP~-~PSdA~gLIRwmL 287 (668)
T KOG0611|consen 247 V--YGTMPFDGRDHKRLVRQISRGAYREPE-TPSDASGLIRWML 287 (668)
T ss_pred h--hcccccCCchHHHHHHHhhcccccCCC-CCchHHHHHHHHH
Confidence 1 224578888888888888877665543 4566666777665
No 176
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.70 E-value=3.6e-16 Score=163.66 Aligned_cols=134 Identities=22% Similarity=0.316 Sum_probs=100.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+...+|+.||+|+...+... +..+.+.+|+..+..
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKS-------------------------------SVRKQILRELQIMHE 59 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcc-------------------------------hHHHHHHHHHHHHHH
Confidence 5699999999999999889999999997643211 223445566666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
.+| +++.-..-+....+..+|||||++|++|.++... .....++..++.+||+ +|++|+
T Consensus 60 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~ 128 (284)
T cd06620 60 CRS-----------PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHR 128 (284)
T ss_pred cCC-----------CCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 544 4444334444556788999999999999876432 1122456677899996 699999
Q ss_pred CCCCCcEEEecCCcEEEEecCCcccc
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|++|.||+++.+++++++|||++...
T Consensus 129 dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 129 DIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred CCCHHHEEECCCCcEEEccCCcccch
Confidence 99999999999999999999998654
No 177
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.70 E-value=4.8e-16 Score=161.82 Aligned_cols=138 Identities=19% Similarity=0.270 Sum_probs=99.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+++.+|+.||+|+....... ....+.+.+|+..+..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 56 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD------------------------------PVIKKIALREIRMLKQ 56 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccC------------------------------ccccHHHHHHHHHHHh
Confidence 4699999999999999989999999987532110 0011223345444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|+.+..+... ...-.++..++.+||+.|++|+|
T Consensus 57 ~~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d 125 (286)
T cd07847 57 LKH-----------PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD 125 (286)
T ss_pred CCC-----------CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 333 3433333344456678899999999888766421 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
+||.||+++.+|.++++|||++..+...
T Consensus 126 l~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 126 VKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred CChhhEEEcCCCcEEECccccceecCCC
Confidence 9999999999999999999999876543
No 178
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.70 E-value=2e-16 Score=166.14 Aligned_cols=136 Identities=21% Similarity=0.386 Sum_probs=97.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||..+..... +.+.....+|++.+..
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 60 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK------------------------------EGFPITSLREINILLK 60 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc------------------------------ccchhhHHHHHHHHHh
Confidence 5799999999999999989999999987643111 1222334455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.-..-+.... ...+++|||+++ .|.++... ...-.++..++.+||+.|++
T Consensus 61 l~h-----------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~ 128 (293)
T cd07843 61 LQH-----------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWIL 128 (293)
T ss_pred cCC-----------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 433 4433222222233 678999999986 66554321 11225677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+|++|+||+++.+|.++++|||++..+..
T Consensus 129 H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 129 HRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred eccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999999999999999999999999887654
No 179
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.70 E-value=3e-16 Score=165.32 Aligned_cols=135 Identities=19% Similarity=0.247 Sum_probs=95.4
Q ss_pred ccccccccceEEEEEEccCC--------------cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG--------------RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDE 260 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG--------------~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde 260 (704)
+.||+|+||.||+|+...++ ..||||+.+++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------- 59 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKT------------------------------- 59 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHH-------------------------------
Confidence 56999999999999875432 359999988653221
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------------
Q 005274 261 WASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------------- 323 (704)
Q Consensus 261 ~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------------- 323 (704)
....+.+|++.++..+| +++.-..-+.......++||||++|++|.++....
T Consensus 60 ~~~~~~~ei~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 128 (295)
T cd05097 60 ARNDFLKEIKIMSRLKN-----------PNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128 (295)
T ss_pred HHHHHHHHHHHHHhCCC-----------CCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccH
Confidence 11234455555444433 33222222334456788999999999998764210
Q ss_pred ----hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 324 ----LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 324 ----l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
..-.++..++.+||+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 129 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 180 (295)
T cd05097 129 ANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLY 180 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccc
Confidence 122567788999999999999999999999999999999999987653
No 180
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=8.5e-17 Score=174.95 Aligned_cols=169 Identities=21% Similarity=0.236 Sum_probs=125.3
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
++.||+|-|+.|-.|++.-||+.|||||+.+--.+ +--...+++|+..++
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD------------------------------~~st~hlfqEVRCMK 72 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD------------------------------TLSTGHLFQEVRCMK 72 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccc------------------------------hhhhhHHHHHHHHHH
Confidence 46899999999999999999999999998642111 112346777766655
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------hhHH---HHHHHHHHHHHHCCccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------YLIE---VGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------~l~e---~~v~~~L~qLh~~G~~H 343 (704)
-.+| ++|+-.+.+.+..++.||+.|.=+|++|.|+.-. .+.. .++..++.|+|.-.++|
T Consensus 73 LVQH-----------pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 73 LVQH-----------PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HhcC-----------cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5544 5666555566778999999999999999998521 1222 56677788889999999
Q ss_pred cCCCCCcEEE-ecCCcEEEEecCCccccChhHH-HHHHH----HHHH-hhccChhHHHHHHHhcCCC
Q 005274 344 ADPHPGNLFR-SYDGKLAYIDFGMMGEFKEELR-EGFIE----ACLH-LVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 344 ~DphPgNILv-~~dG~l~liDFGl~~~l~~~~r-~~~~~----~~~~-l~~~d~~~la~d~~slG~l 403 (704)
||+||+|+.+ ..-|-+|+.|||+.-.+.+..+ .++|+ ..+. ++...|++.+.|+|++|++
T Consensus 142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVI 208 (864)
T KOG4717|consen 142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVI 208 (864)
T ss_pred ccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHH
Confidence 9999999975 4569999999999988877644 33333 2233 4455678888899999875
No 181
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.70 E-value=3.2e-16 Score=169.42 Aligned_cols=271 Identities=18% Similarity=0.230 Sum_probs=148.6
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.++||+|++|.||+|+.+.+|+.||||+.+..... +.+...+.+|+..++
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~e~~~l~ 69 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS------------------------------EIFAKRAYRELTLLK 69 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc------------------------------ccchhHHHHHHHHHH
Confidence 47899999999999999889999999987642110 112234456666666
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
..+|. ++.+.++ +.............++||||+.+ .+.+.... ...-.++..++.+||..|++|+|+
T Consensus 70 ~l~h~-niv~~~~----~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl 143 (342)
T cd07879 70 HMQHE-NVIGLLD----VFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDL 143 (342)
T ss_pred hcCCC-Cccchhh----eecccccCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 55441 1211111 11111111122356899999964 55543221 122356778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHH---HHHHHHHhhcc-ChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREG---FIEACLHLVNR-DFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~---~~~~~~~l~~~-d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
||+||+++.+|.++++|||++.......... .....+....+ .......|+|++|++ +.+++.+
T Consensus 144 kp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi------------l~el~~g 211 (342)
T cd07879 144 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI------------MAEMLTG 211 (342)
T ss_pred CHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHH------------HHHHHhC
Confidence 9999999999999999999987654322110 00112222222 223345666666654 2222211
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
. ..+..-+. ...+...+...+.. ++.+........... ....-|.+. +--........++++++++
T Consensus 212 ~--~pf~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~li 277 (342)
T cd07879 212 K--TLFKGKDY---LDQLTQILKVTGVP-GPEFVQKLEDKAAKS--YIKSLPKYP------RKDFSTLFPKASPQAVDLL 277 (342)
T ss_pred C--CCCCCCCH---HHHHHHHHHhcCCC-CHHHHHHhcccchHH--HHhhcCCcc------cchHHHHhcCCCHHHHHHH
Confidence 0 01111111 11222222222211 122221111100000 000001000 0001112345788999999
Q ss_pred HHhhhccccCCCCHHHHHhhhhHH
Q 005274 503 VALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 503 ~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
++||..||..|++.-+.|.|+.+.
T Consensus 278 ~~~l~~dP~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 278 EKMLELDVDKRLTATEALEHPYFD 301 (342)
T ss_pred HHHcCCChhhCcCHHHHhcCcchh
Confidence 999999999999999999998873
No 182
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.70 E-value=4.8e-16 Score=162.09 Aligned_cols=247 Identities=21% Similarity=0.194 Sum_probs=148.1
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
++++|..+ +.||+|++|.||+|..+.+|+.||||+....... .....
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~ 48 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-------------------------------DEIED 48 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccch-------------------------------HHHHH
Confidence 45677666 4599999999999999889999999986532100 11123
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQL 336 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qL 336 (704)
+.+|+..+...+| +++.-..-+.......++||||++|+++.+.... ...-.++..++.++
T Consensus 49 ~~~e~~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~l 117 (277)
T cd06641 49 IQQEITVLSQCDS-----------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYL 117 (277)
T ss_pred HHHHHHHHHhcCC-----------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3344444333322 4443333344456678999999999998876431 11225667788999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|+.|++|+|++|+||+++.+|.++++|||++..+....... .....+.++.+|+....
T Consensus 118 h~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~----------------~~~~~~~~y~~PE~~~~------ 175 (277)
T cd06641 118 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR----------------NTFVGTPFWMAPEVIKQ------ 175 (277)
T ss_pred ccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh----------------ccccCCccccChhhhcc------
Confidence 99999999999999999999999999999987665432100 00011223333332100
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCCh
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
...+...|.|++|.++.++... ..++..-... ...+.+.....|. +....++
T Consensus 176 -----~~~~~~~Dv~slG~~l~~l~~g--~~p~~~~~~~-------~~~~~~~~~~~~~--------------~~~~~~~ 227 (277)
T cd06641 176 -----SAYDSKADIWSLGITAIELAKG--EPPHSELHPM-------KVLFLIPKNNPPT--------------LEGNYSK 227 (277)
T ss_pred -----CCCCchhhHHHHHHHHHHHHcC--CCCCCccchH-------HHHHHHhcCCCCC--------------CCcccCH
Confidence 0011123455666655554431 1111100000 0001111100111 1234578
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++.+++.+++..+|..|++.-+.+-|..+
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 256 (277)
T cd06641 228 PLKEFVEACLNKEPSFRPTAKELLKHKFI 256 (277)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHhCHHH
Confidence 89999999999999999998888888765
No 183
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.70 E-value=2.8e-16 Score=162.34 Aligned_cols=134 Identities=19% Similarity=0.295 Sum_probs=98.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+...+|+.||+|+.+...... ...+.+|+..++.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------------------------------~~~~~~e~~~~~~ 62 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGED--------------------------------FAVVQQEIIMMKD 62 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhH--------------------------------HHHHHHHHHHHHh
Confidence 57999999999999998899999999987532110 0123345444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|+.|.++... ...-.++..++.++|+.|++|+|
T Consensus 63 l~h-----------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 131 (267)
T cd06645 63 CKH-----------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRD 131 (267)
T ss_pred CCC-----------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 433 3333222233345677899999999999886431 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++|+||+++.+|.++++|||++..+.
T Consensus 132 lkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 132 IKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred CCHHHEEECCCCCEEECcceeeeEcc
Confidence 99999999999999999999987654
No 184
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.2e-16 Score=170.25 Aligned_cols=136 Identities=21% Similarity=0.315 Sum_probs=101.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|.-++||+|+...+|+.||||+.. +...-++ -+. +.+|
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~in------------------------------LEkc~~~-ld~------l~kE 74 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIIN------------------------------LEKCNND-LDA------LRKE 74 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEee------------------------------hhhhhhh-HHH------HHHH
Confidence 46999999999999999999999999974 1111111 111 3344
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~G~~H 343 (704)
..++.- -++|+|.--..-+-.....|+||-|+.|+++.++.... .+-.++..+|.|||.+|.+|
T Consensus 75 ~~~msl-----~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IH 149 (516)
T KOG0582|consen 75 VQTMSL-----IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIH 149 (516)
T ss_pred HHHhhh-----cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 444322 23477655444445567889999999999999986532 12256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
||+|+||||++.||.++|.|||.+..+-.
T Consensus 150 RdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 150 RDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred cccccccEEEcCCCcEEEcCceeeeeecc
Confidence 99999999999999999999998876543
No 185
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.69 E-value=6.1e-16 Score=164.13 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=94.3
Q ss_pred ccccccccceEEEEEEccCCcEE--EEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVV--AVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~V--AVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||.|+||+||+|+++.+|..+ |+|..+..... .....+.+|++.+
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~Ei~~l 61 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-------------------------------DDHRDFAGELEVL 61 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCH-------------------------------HHHHHHHHHHHHH
Confidence 57999999999999998788765 66554422111 1123444565555
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------------------hhHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------------------YLIEV 327 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------------------~l~e~ 327 (704)
.... +++++.-..-+....+..+++|||++|++|.++... ...-.
T Consensus 62 ~~l~----------~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (303)
T cd05088 62 CKLG----------HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 131 (303)
T ss_pred HHhc----------CCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHH
Confidence 4442 224433222234455678999999999998876431 01225
Q ss_pred HHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 328 GVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 328 ~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
++..++.+||+.|++|+|++|.||+++.++.++++|||++..
T Consensus 132 qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~ 173 (303)
T cd05088 132 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 173 (303)
T ss_pred HHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcc
Confidence 677789999999999999999999999999999999999864
No 186
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.69 E-value=1.5e-16 Score=173.44 Aligned_cols=262 Identities=18% Similarity=0.167 Sum_probs=158.7
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
-.|+|-|+.|.+|++..-|..||||+++.+- -+.+.-..|+.+++.+
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---------------------------------~M~KtGl~EleiLkKL 485 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNE---------------------------------VMHKTGLKELEILKKL 485 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecch---------------------------------HHhhhhhHHHHHHHHh
Confidence 4699999999999999889999999999651 1122334555555544
Q ss_pred hhHH-----HHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------------hhHHHHHHHHHHHHHH
Q 005274 276 KNGL-----KFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 276 ~n~~-----~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------------~l~e~~v~~~L~qLh~ 338 (704)
..+. .+.++|.++. +.+..+||+|-+ ...|.++... +....++..+|+.|-.
T Consensus 486 ~~AD~Edk~Hclrl~r~F~----------hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~ 554 (752)
T KOG0670|consen 486 NDADPEDKFHCLRLFRHFK----------HKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK 554 (752)
T ss_pred hccCchhhhHHHHHHHHhh----------hcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh
Confidence 3211 1222222221 256678999977 4466665431 3444677778888889
Q ss_pred CCccccCCCCCcEEEecC-CcEEEEecCCccccChhHHHHHH--HH--HHHhhccChhHHHHHHHhcCCCCCccchHHHH
Q 005274 339 KGFYHADPHPGNLFRSYD-GKLAYIDFGMMGEFKEELREGFI--EA--CLHLVNRDFDALAKDFVTLGLLPPTAEKEAVT 413 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~d-G~l~liDFGl~~~l~~~~r~~~~--~~--~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~ 413 (704)
+||+|+|+||.|||+++. ..++|||||.+...++..-..|. .+ .+.++-+-.|..+.|+|+.||...+.-...
T Consensus 555 c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGk-- 632 (752)
T KOG0670|consen 555 CGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGK-- 632 (752)
T ss_pred cCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccc--
Confidence 999999999999999865 45899999999988765433221 11 123555555667788888888644432221
Q ss_pred HHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccc--------------
Q 005274 414 KALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVL-------------- 479 (704)
Q Consensus 414 ~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~-------------- 479 (704)
.+..|-. -.+|+..+.+..-.+|..+.. --... -.-.|-+++++
T Consensus 633 ---------IlFpG~T-------NN~MLrl~me~KGk~p~KmlR---KgqF~---dqHFD~d~nf~~~e~D~vT~r~~~~ 690 (752)
T KOG0670|consen 633 ---------ILFPGRT-------NNQMLRLFMELKGKFPNKMLR---KGQFK---DQHFDQDLNFLYIEVDKVTEREKRT 690 (752)
T ss_pred ---------eecCCCC-------cHHHHHHHHHhcCCCcHHHhh---hcchh---hhhcccccceEEEeccccccceeEE
Confidence 1111111 134555555555555544321 11000 12223333322
Q ss_pred --cccchh-------HHhhhccCCCh----HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 480 --GSTYPY-------IARKVLTDSSP----QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 480 --~~a~P~-------i~r~ll~d~sp----~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...+|- +...-+++..+ +++++|.+||..||.+|++--+||.|+.+
T Consensus 691 vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi 749 (752)
T KOG0670|consen 691 VMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFI 749 (752)
T ss_pred EecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcc
Confidence 222331 11111333333 47899999999999999999999999764
No 187
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.69 E-value=4.5e-16 Score=162.96 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=143.6
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
.||.|++|.||+|+...+|+.||||+..+.....-. .+..+..|.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~~~~ 45 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ-----------------------------------GETLALNER 45 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccch-----------------------------------hHHHHHHHH
Confidence 379999999999999889999999987643111000 000111121
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
........ .+++++.....+.+.....++||||+.|+.|.+.... ...-.++..++.++|+.|++|+|+
T Consensus 46 ~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di 123 (278)
T cd05606 46 IMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDL 123 (278)
T ss_pred HHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence 11111111 2334443322333445678899999999999776421 112256677899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.++.++++|||++..+....... ...+.++++|+.-.. ...++.
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------~~~~~~y~aPE~~~~----------~~~~~~ 175 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKKKPHA------------------SVGTHGYMAPEVLQK----------GVAYDS 175 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCccCCcC------------------cCCCcCCcCcHHhcC----------CCCCCc
Confidence 9999999999999999999987654321110 012234555542110 001233
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCC--hhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIP--SYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP--~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
..|.|++|.++.++... ..++.-. .....+.+.. ....+. +....++++.+++++
T Consensus 176 ~~Di~s~G~~l~~l~~g--~~p~~~~~~~~~~~~~~~~-------~~~~~~--------------~~~~~s~~~~~li~~ 232 (278)
T cd05606 176 SADWFSLGCMLFKLLRG--HSPFRQHKTKDKHEIDRMT-------LTMAVE--------------LPDSFSPELRSLLEG 232 (278)
T ss_pred ccchHhHHHHHHHHHhC--CCCCCCCCccchHHHHHHh-------hccCCC--------------CCCcCCHHHHHHHHH
Confidence 45677777777666542 2222211 1111111000 001111 112458899999999
Q ss_pred hhhccccCCC-----CHHHHHhhhhH
Q 005274 505 LLYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 505 lL~~d~~~R~-----~rle~Ll~~~~ 525 (704)
||..||..|. +.-+.+-|+.+
T Consensus 233 ~l~~~p~~R~~~~~~~~~~ll~~~~~ 258 (278)
T cd05606 233 LLQRDVNRRLGCLGRGAQEVKEHPFF 258 (278)
T ss_pred HhhcCHHhccCCCCCCHHHHHhCccc
Confidence 9999999999 66676667665
No 188
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.69 E-value=4e-16 Score=167.92 Aligned_cols=139 Identities=18% Similarity=0.244 Sum_probs=95.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+..+.-.. +......+|+..+..
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 59 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ-------------------------------TFCQRTLREIKILRR 59 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccc-------------------------------hhHHHHHHHHHHHHh
Confidence 5799999999999999989999999998642111 122334556666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| .++.+.++ +..+. .+......+++|||+++ .+.+.... ...-.++..++.+||+.|++|+|+
T Consensus 60 l~h-~niv~~~~----~~~~~-~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dl 132 (336)
T cd07849 60 FKH-ENIIGILD----IIRPP-SFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDL 132 (336)
T ss_pred CCC-CCcCchhh----eeecc-cccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 654 12222111 11111 11122457899999976 55443221 112256778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccC
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
||.||+++.+|.++++|||++....
T Consensus 133 kp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 133 KPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred CHHHEEECCCCCEEECcccceeecc
Confidence 9999999999999999999987654
No 189
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.69 E-value=1.6e-16 Score=166.53 Aligned_cols=135 Identities=21% Similarity=0.346 Sum_probs=91.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.+..... ......+.+|+..+..
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 56 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE------------------------------EGIPPTALREISLLQM 56 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccc------------------------------cCCchHHHHHHHHHHH
Confidence 4699999999999999989999999987532110 0111234445554444
Q ss_pred HhhHHHHHHHhcCCccee-eceeeeeccc-----ceeEEEEeccCCChhhHHhh--------------hhHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYVEQTT-----RKVLIMEWVEGQKLSEVKDL--------------YLIEVGVYCSFN 334 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~e~ss-----~~vLVmE~i~G~~L~d~~~~--------------~l~e~~v~~~L~ 334 (704)
..+ ++++. +..++ .... ..+++|||++| .+.++... ...-.++..+|.
T Consensus 57 l~~----------~~~i~~~~~~~-~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 124 (295)
T cd07837 57 LSE----------SIYIVRLLDVE-HVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124 (295)
T ss_pred ccC----------CCCccceeeeE-eecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 332 12221 11111 1111 26899999987 56554211 112256778899
Q ss_pred HHHHCCccccCCCCCcEEEec-CCcEEEEecCCccccC
Q 005274 335 QLLEKGFYHADPHPGNLFRSY-DGKLAYIDFGMMGEFK 371 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~-dG~l~liDFGl~~~l~ 371 (704)
+||+.|++|+|+||+||+++. ++.++++|||++..+.
T Consensus 125 ~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 125 HCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHCCeeecCCChHHEEEecCCCeEEEeecccceecC
Confidence 999999999999999999998 8999999999987653
No 190
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.69 E-value=8.4e-16 Score=164.10 Aligned_cols=153 Identities=21% Similarity=0.289 Sum_probs=107.9
Q ss_pred HHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChH
Q 005274 176 TIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQ 255 (704)
Q Consensus 176 ~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~ 255 (704)
+...-++.++++.|... +.||+|++|+||+|+...+|+.||||+....-..
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~--------------------------- 64 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--------------------------- 64 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC---------------------------
Confidence 44556788888888865 5699999999999999889999999987532110
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhH
Q 005274 256 AVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLI 325 (704)
Q Consensus 256 ~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~ 325 (704)
..+....+..|+..++..+| +++.-...+.......++||||+.| .+.+.... ...
T Consensus 65 --~~~~~~~~~~e~~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i 130 (317)
T cd06635 65 --SNEKWQDIIKEVKFLQRIKH-----------PNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI 130 (317)
T ss_pred --chHHHHHHHHHHHHHHhCCC-----------CCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHH
Confidence 01122334445554443333 4443333334445678999999987 55444321 112
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 326 EVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 326 e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
-.++..++.++|+.|++|+|++|+||+++.+|.++++|||++....
T Consensus 131 ~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 131 THGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred HHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 2567788999999999999999999999999999999999987544
No 191
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.69 E-value=2.9e-16 Score=171.61 Aligned_cols=165 Identities=19% Similarity=0.281 Sum_probs=111.9
Q ss_pred cccccccceEEEEEEccCCcE-EEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRV-VAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~-VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
-+|+|+||+||+|..+ |+. ||||+..+.-.. ++..+.+.+|+.++.-
T Consensus 48 ~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~------------------------------~~~~~~f~~E~~il~~ 95 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFD------------------------------DESRKAFRREASLLSR 95 (362)
T ss_pred hcccCCceeEEEEEeC--CceeEEEEEecchhcC------------------------------hHHHHHHHHHHHHHHh
Confidence 3999999999999995 777 999998754211 0113445555555554
Q ss_pred HhhHHHHHHHhcCCccee-eceeeeecccceeEEEEeccCCChhhHHhh----h-------hHHHHHHHHHHHHHHCC-c
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----Y-------LIEVGVYCSFNQLLEKG-F 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~-------l~e~~v~~~L~qLh~~G-~ 341 (704)
.+| |+|+ +..++.+......+||||++|+.|.++... . ....++..++.|||+.+ +
T Consensus 96 l~H-----------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i 164 (362)
T KOG0192|consen 96 LRH-----------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI 164 (362)
T ss_pred CCC-----------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 444 4433 333332222247899999999999998632 1 12357788999999999 9
Q ss_pred cccCCCCCcEEEecCC-cEEEEecCCccccChh------HHHHHHHHHHHhhc--cChhHHHHHHHhcCCC
Q 005274 342 YHADPHPGNLFRSYDG-KLAYIDFGMMGEFKEE------LREGFIEACLHLVN--RDFDALAKDFVTLGLL 403 (704)
Q Consensus 342 ~H~DphPgNILv~~dG-~l~liDFGl~~~l~~~------~r~~~~~~~~~l~~--~d~~~la~d~~slG~l 403 (704)
+|||+||.|+|++.++ .+||+|||+++..... ...++.-+.++++. +..+.-..|+++.|++
T Consensus 165 IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv 235 (362)
T KOG0192|consen 165 IHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV 235 (362)
T ss_pred eecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH
Confidence 9999999999999998 9999999999765542 11222334455555 3344455666666654
No 192
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.69 E-value=3.5e-16 Score=162.86 Aligned_cols=134 Identities=22% Similarity=0.356 Sum_probs=96.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+|+.||||+.+.+... .....+.+|+..++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~E~~~l~~ 54 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-------------------------------GTPSTAIREISLMKE 54 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccc-------------------------------cchHHHHHHHHHHHh
Confidence 5799999999999999989999999998643211 001223345554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.-..-+.......++||||++| .+.++... .-.-.++..++.+||+.|++
T Consensus 55 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 55 LKH-----------ENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred hcC-----------CCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 433 4443333344556778999999987 55554221 11225677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|++|+||+++.+|.++++|||++..+.
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~ 151 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFG 151 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence 99999999999999999999999987553
No 193
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.69 E-value=2.9e-16 Score=163.64 Aligned_cols=138 Identities=19% Similarity=0.284 Sum_probs=98.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+++.+|+.||||+.+..... .+....+.+|+..++.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 56 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD------------------------------EDVKKTALREVKVLRQ 56 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhccc------------------------------ccchhHHHHHHHHHHh
Confidence 5699999999999999989999999987642110 1222445556555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|..+..+... ...-.++..++.+||+.|++|+|
T Consensus 57 l~~-----------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 125 (288)
T cd07833 57 LRH-----------ENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD 125 (288)
T ss_pred cCC-----------CCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 433 2222111122335668999999998777654321 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
++|+||+++.+|.++++|||++..+...
T Consensus 126 l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 126 IKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred CCHHHeEECCCCCEEEEeeecccccCCC
Confidence 9999999999999999999998876543
No 194
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.69 E-value=5.3e-16 Score=159.95 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=150.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+...+|+.||+|+.++...... ........+..|+..++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~--------------------------~~~~~~~~~~~e~~~l~~ 59 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSS--------------------------EQEEVVEALRKEIRLMAR 59 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCch--------------------------hHHHHHHHHHHHHHHHHH
Confidence 579999999999999988999999999864321100 001223445556666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--h-------hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--Y-------LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~-------l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|++|.++... . ..-.++..++.+||+.|++|+|
T Consensus 60 l~h-----------~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~ 128 (268)
T cd06630 60 LNH-----------PHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRD 128 (268)
T ss_pred cCC-----------CceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 544 3332222233345677899999999999887532 1 1125777889999999999999
Q ss_pred CCCCcEEEecCC-cEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 346 PHPGNLFRSYDG-KLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 346 phPgNILv~~dG-~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
++|+||+++.+| .++++|||++..+....... .++. .....+.++.+|+.-. ....
T Consensus 129 i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~--~~~~~~~~~~~PE~~~-----------~~~~ 185 (268)
T cd06630 129 VKGANLLIDSTGQRLRIADFGAAARLAAKGTGA----------GEFQ--GQLLGTIAFMAPEVLR-----------GEQY 185 (268)
T ss_pred CCHHHEEEcCCCCEEEEcccccccccccccccC----------Cccc--cccccccceeCHhHhc-----------cCCC
Confidence 999999998876 59999999988765431100 0000 0011223444444210 0112
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCCh---hHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPS---YFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~---~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
+...|.|++|.++.++... ..++.... ....+.+... ....|+ +-...+++++++
T Consensus 186 ~~~~Dv~slG~~l~~l~~g--~~p~~~~~~~~~~~~~~~~~~------~~~~~~--------------~~~~~~~~~~~~ 243 (268)
T cd06630 186 GRSCDVWSVGCVIIEMATA--KPPWNAEKHSNHLALIFKIAS------ATTAPS--------------IPEHLSPGLRDV 243 (268)
T ss_pred CcccchHHHHHHHHHHHhC--CCCCCCCCCcchHHHHHHHhc------cCCCCC--------------CchhhCHHHHHH
Confidence 2334667777776666542 12221111 1111111100 000111 112457889999
Q ss_pred HHHhhhccccCCCCHHHHHhhhhH
Q 005274 502 LVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+.++|..||..|.+..+-+.|+.+
T Consensus 244 i~~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 244 TLRCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred HHHHcCCCcccCcCHHHHhcCccc
Confidence 999999999999999998888754
No 195
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.69 E-value=4.5e-16 Score=158.71 Aligned_cols=136 Identities=19% Similarity=0.267 Sum_probs=98.7
Q ss_pred ccccccccceEEEEEEccC---CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS---GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t---G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|++|.||+|+.... +..|+||+.++..... -...+.+|++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~~~e~~~ 49 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-------------------------------ERKDFLKEARV 49 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-------------------------------HHHHHHHHHHH
Confidence 4699999999999999755 8999999987543211 11234445555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------h-------HHHHHHHHH
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------L-------IEVGVYCSF 333 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l-------~e~~v~~~L 333 (704)
+...+| +++.-..-+.......+++|||++|++|.+..... + .-.++..++
T Consensus 50 l~~~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al 118 (262)
T cd00192 50 MKKLGH-----------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM 118 (262)
T ss_pred HhhcCC-----------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence 444433 33322222333356788999999999998874321 1 124666788
Q ss_pred HHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.+||+.|++|+|++|.||+++.++.++++|||.+..+..
T Consensus 119 ~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 119 EYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred HHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999999999999999999999999999999987654
No 196
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.69 E-value=9.8e-18 Score=198.17 Aligned_cols=233 Identities=18% Similarity=0.227 Sum_probs=153.1
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEec--CChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQR--PGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqr--P~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
..-||.|-||+||-|....||+-.|||-++ |+... .-..+.+|+..
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k--------------------------------~~~~i~eEm~v 1287 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK--------------------------------TFKLIAEEMKV 1287 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccc--------------------------------cCcchHHHHHH
Confidence 357999999999999999999999999654 22110 11234455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
+.-.+| |+++-+..+.-.-.+.++-||||+|+.|.++... +....++..++.+||++||+
T Consensus 1288 lE~lnH-----------pNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIV 1356 (1509)
T KOG4645|consen 1288 LEGLNH-----------PNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIV 1356 (1509)
T ss_pred HHhccC-----------ccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCce
Confidence 444444 4555544444445667899999999999998653 23446778899999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHH------HHHH----HHHHhhc---cChhHHHHHHHhcCCCCCccch
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE------GFIE----ACLHLVN---RDFDALAKDFVTLGLLPPTAEK 409 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~------~~~~----~~~~l~~---~d~~~la~d~~slG~l~p~~d~ 409 (704)
||||||.||+++.+|-||+.|||.+..+...... .+.+ +.+.++. .+..+-|.|+|++||+--+.-
T Consensus 1357 HRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~- 1435 (1509)
T KOG4645|consen 1357 HRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMA- 1435 (1509)
T ss_pred ecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEee-
Confidence 9999999999999999999999999988665311 1111 2233332 244555778888888632211
Q ss_pred HHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhh
Q 005274 410 EAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARK 489 (704)
Q Consensus 410 ~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ 489 (704)
.|-..|+ .+..+|+-+.+. +..- .|-+-
T Consensus 1436 ----------------tGkrPW~-----------------~~dne~aIMy~V-------~~gh----------~Pq~P-- 1463 (1509)
T KOG4645|consen 1436 ----------------TGKRPWA-----------------ELDNEWAIMYHV-------AAGH----------KPQIP-- 1463 (1509)
T ss_pred ----------------cCCCchh-----------------hccchhHHHhHH-------hccC----------CCCCc--
Confidence 1112222 111122211111 1111 12121
Q ss_pred hccCCChHHHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 490 VLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 490 ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
+..|++.++.|.+.|..||+.||++.|-|-|..
T Consensus 1464 --~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1464 --ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred --hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 237899999999999999999999988666643
No 197
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.69 E-value=3.9e-16 Score=162.12 Aligned_cols=137 Identities=20% Similarity=0.363 Sum_probs=97.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...+|+.||||+.+..... ++....+.+|+..++.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 54 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEK------------------------------EGFPITAIREIKLLQK 54 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccccc------------------------------ccchHHHHHHHHHHHh
Confidence 4689999999999999888999999998754200 1122334455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.-..-+.... ...++||||+++ ++.+.... ...-.++..++.+||..|++
T Consensus 55 l~~-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 55 LRH-----------PNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ccC-----------CCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 443 3322111122223 678999999976 66655321 11225677789999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
|+|++|+||+++.+|.++++|||++......
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 9999999999999999999999998876543
No 198
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.68 E-value=8.9e-16 Score=156.92 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=96.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.+.. |+.||+|+.+..... +....+..|++.++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 48 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-------------------------------DLKRKFLQEAEILKQ 48 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-------------------------------HHHHHHHHHHHHHHh
Confidence 368999999999999975 999999987643211 112233444444433
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hh--HHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YL--IEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l--~e~~v~~~L~qLh~~G~~H~ 344 (704)
..| +++.....+....+..++||||++|++|.++... .+ .-.++..++.++|+.|++|+
T Consensus 49 l~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~ 117 (251)
T cd05041 49 YDH-----------PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHR 117 (251)
T ss_pred CCC-----------CCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehh
Confidence 322 4444333344556678999999999999876421 11 11456677899999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|++|.||+++.+++++++|||++....
T Consensus 118 di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 118 DLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred hcCcceEEEcCCCcEEEeecccccccc
Confidence 999999999999999999999987654
No 199
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.68 E-value=3.7e-16 Score=167.76 Aligned_cols=285 Identities=20% Similarity=0.168 Sum_probs=150.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHH--HHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVD--EWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivd--e~~~~l~~Eld~l 272 (704)
+.||+|++|.||+|+.+.+|+.||||+.+.........+ ....+. .+...+.+|++.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~E~~~l 74 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK--------------------DRQLVGMCGIHFTTLRELKIM 74 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc--------------------chhhhcccccchhHHHHHHHH
Confidence 469999999999999988999999999864321100000 000000 0112344555555
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
...+| +++.-..-+.......+++|||++| .+.+.... ...-.++..++.+||+.|++|
T Consensus 75 ~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H 142 (335)
T PTZ00024 75 NEIKH-----------ENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMH 142 (335)
T ss_pred HhCCC-----------cceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 55443 3332222233345678899999986 56554321 112356778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|++|+||+++.+|.++++|||++............. ................+.++.+|+.-... ..
T Consensus 143 ~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------~~ 210 (335)
T PTZ00024 143 RDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLS--KDETMQRREEMTSKVVTLWYRAPELLMGA----------EK 210 (335)
T ss_pred ccccHHHeEECCCCCEEECCccceeeccccccccccc--ccccccccccccccccccCCCCChhcccC----------CC
Confidence 9999999999999999999999987654211000000 00000000000001112334444421000 00
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhh------cCCCCccccccchhHHhhhccCCChH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAIS------SNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~------ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
++...|.|++|.++.++... ..++........+.+....++..... -.|.+.......|..........+.+
T Consensus 211 ~~~~~Dv~slG~~l~el~tg--~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (335)
T PTZ00024 211 YHFAVDMWSVGCIFAELLTG--KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDD 288 (335)
T ss_pred CCcHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChH
Confidence 11223445555555554431 12222222211111111111100000 00111111111222233344566889
Q ss_pred HHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 498 LKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++++++||..||..|++.-+.|.|+.+
T Consensus 289 ~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 289 AIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 9999999999999999999999999876
No 200
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.68 E-value=2.8e-16 Score=166.41 Aligned_cols=248 Identities=21% Similarity=0.227 Sum_probs=148.9
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+...|..+ ..||.|++|+||+|+.+.+|+.||||+...+... ....
T Consensus 19 ~~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--------------------------------~~~~ 64 (297)
T cd06659 19 PRSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--------------------------------RREL 64 (297)
T ss_pred chhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--------------------------------hHHH
Confidence 33444444 3699999999999999889999999997532110 1123
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQL 336 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qL 336 (704)
+.+|+..+....| ..+.+.++ +.......+++|||++|+.|.+.... ...-.++..++.++
T Consensus 65 ~~~e~~~l~~l~h-p~i~~~~~----------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~L 133 (297)
T cd06659 65 LFNEVVIMRDYQH-QNVVEMYK----------SYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYL 133 (297)
T ss_pred HHHHHHHHHhCCC-Cchhhhhh----------heeeCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence 4455555554444 22222222 12235678899999999999876432 11225677789999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|+.|++|+|++|+||+++.+|.++++|||++..+....... .....+.++++|+.-.
T Consensus 134 H~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~----------------~~~~~~~~y~aPE~~~------- 190 (297)
T cd06659 134 HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR----------------KSLVGTPYWMAPEVIS------- 190 (297)
T ss_pred HhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc----------------cceecCccccCHHHHc-------
Confidence 99999999999999999999999999999987554321100 0011123444443210
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCCh
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
....+...|.|++|.++.++... +.++........+ +. +.....+... .....++
T Consensus 191 ----~~~~~~~~Dv~slG~il~el~~g--~~p~~~~~~~~~~-~~------~~~~~~~~~~------------~~~~~~~ 245 (297)
T cd06659 191 ----RTPYGTEVDIWSLGIMVIEMVDG--EPPYFSDSPVQAM-KR------LRDSPPPKLK------------NAHKISP 245 (297)
T ss_pred ----cCCCCchhhHHHHHHHHHHHHhC--CCCCCCCCHHHHH-HH------HhccCCCCcc------------ccCCCCH
Confidence 01112234556666666665532 1122111111111 11 1111111111 1124577
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+++++++||..||..|++.-+-+.|+.+
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~~~ 274 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDHPFL 274 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhChhh
Confidence 89999999999999999998887777765
No 201
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.68 E-value=4.9e-16 Score=172.53 Aligned_cols=45 Identities=20% Similarity=0.233 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++..++.+||+.|++|+|+||.||+++.++.++++|||+++.+.
T Consensus 244 ~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~ 288 (400)
T cd05105 244 YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecc
Confidence 356778999999999999999999999999999999999987654
No 202
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=5.4e-17 Score=189.93 Aligned_cols=230 Identities=16% Similarity=0.245 Sum_probs=142.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|.||.|+..+++.|++.+|+|++.+- | . +.+ .-...+.+|-|.+--
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~-------e--M-------lKr-------------~~tA~F~EERDimv~ 131 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKW-------E--M-------LKR-------------AETACFREERDIMVF 131 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHH-------H--H-------hhc-------------hhHHHHHHHhHHHHc
Confidence 6899999999999999999999999986521 0 0 000 001234455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
+.. ++|+-....++.....||||||++||+|-.+... +++-..+..++.-+|+-|++|||
T Consensus 132 ~ns-----------~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRD 200 (1317)
T KOG0612|consen 132 GNS-----------EWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRD 200 (1317)
T ss_pred CCc-----------HHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceecc
Confidence 432 2222222223335678899999999998776432 23335666778999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||.|+|++.+|+|++.|||.+-.++.+-. +.. ...+.+..|+.|++-. ++.+- ...|+
T Consensus 201 iKPDNvLld~~GHikLADFGsClkm~~dG~---V~s------------~~aVGTPDYISPEvLq-----s~~~~-~g~yG 259 (1317)
T KOG0612|consen 201 IKPDNVLLDKSGHIKLADFGSCLKMDADGT---VRS------------SVAVGTPDYISPEVLQ-----SQGDG-KGEYG 259 (1317)
T ss_pred CCcceeEecccCcEeeccchhHHhcCCCCc---EEe------------ccccCCCCccCHHHHH-----hhcCC-ccccC
Confidence 999999999999999999999877653210 000 1112334455544321 11110 13567
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCC--CCccccccchhHHhhhccCCChHHHHHHH
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNP--NYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP--~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
...|+||+|-++.+++ ++--|+|+-- +.|--+..++- .|++ |- -.+.|++++++++
T Consensus 260 ~ecDwWSlGV~~YEMl-------yG~TPFYads-----lveTY~KIm~hk~~l~F-----P~-----~~~VSeeakdLI~ 317 (1317)
T KOG0612|consen 260 RECDWWSLGVFMYEML-------YGETPFYADS-----LVETYGKIMNHKESLSF-----PD-----ETDVSEEAKDLIE 317 (1317)
T ss_pred CccchhhhHHHHHHHH-------cCCCcchHHH-----HHHHHHHHhchhhhcCC-----Cc-----ccccCHHHHHHHH
Confidence 7888999877665554 3445555321 12222333332 2222 21 1257899999999
Q ss_pred Hhhh
Q 005274 504 ALLY 507 (704)
Q Consensus 504 ~lL~ 507 (704)
.+|+
T Consensus 318 ~ll~ 321 (1317)
T KOG0612|consen 318 ALLC 321 (1317)
T ss_pred HHhc
Confidence 9887
No 203
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.68 E-value=2.9e-16 Score=168.99 Aligned_cols=287 Identities=15% Similarity=0.201 Sum_probs=159.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+.+.+|+.||||+..+.... ....+.+..|+..++.
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 65 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST------------------------------PVLAKRTYRELKLLKH 65 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccc------------------------------cchhHHHHHHHHHHHh
Confidence 6899999999999999989999999987532110 0112344556666555
Q ss_pred HhhHHHHHHHhcCCcce-eeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDV-LIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V-~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++ .+...+.......+++|||+ |++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 66 l~h-----------pniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d 133 (328)
T cd07856 66 LRH-----------ENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRD 133 (328)
T ss_pred cCC-----------CCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 544 332 22333333345678999999 4567665421 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHH---HHHHHHhhcc-ChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGF---IEACLHLVNR-DFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~---~~~~~~l~~~-d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
++|+||+++.+|.++++|||++...+....... ....+..... .......|+|++|++ +..++.
T Consensus 134 l~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i------------l~el~t 201 (328)
T cd07856 134 LKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCI------------FAEMLE 201 (328)
T ss_pred CCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHH------------HHHHHh
Confidence 999999999999999999999876543211100 0011111111 222334555555543 111111
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
.. ..+...+.......+. +.-...|..+...+..-..++-+ .+ .....|..........+++++++
T Consensus 202 g~--~~f~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~l 267 (328)
T cd07856 202 GK--PLFPGKDHVNQFSIIT----DLLGTPPDDVINTICSENTLRFV-----QS---LPKREPVPFSEKFKNADPSAIDL 267 (328)
T ss_pred CC--CCCCCCCHHHHHHHHH----HHhCCCCHHHHHhccchhhHHHH-----hh---ccccCCCcHHHHcCCCCHHHHHH
Confidence 00 0010000000000000 00011122221110000000000 00 11111222233445678899999
Q ss_pred HHHhhhccccCCCCHHHHHhhhhHHHHHHHhhhhcccCCcchhHhHHHHHhhhccccc
Q 005274 502 LVALLYKEGVFRIDRLESLLTESLRARTEKALVKKQTEDTDSRLITKEILSFTLTEKG 559 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s~~g 559 (704)
++++|..+|..|++..+.+.|+.+ ...++...++.+.+.++|.+.+..
T Consensus 268 i~~~l~~~P~~R~t~~ell~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 315 (328)
T cd07856 268 LEKMLVFDPQKRISAAEALAHPYL----------APYHDPTDEPVAEEKFDWSFNDAD 315 (328)
T ss_pred HHHHcCCChhhCCCHHHHhcCCcc----------ccccCCccccCchhhcCCchhccc
Confidence 999999999999999988888876 233444455667777777766543
No 204
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.68 E-value=8.6e-16 Score=159.43 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=94.9
Q ss_pred ccccccccceEEEEEEc---cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR---QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk---~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|+||.||+|+++ .++..||+|+.+.+... .....+.+|+..
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~-------------------------------~~~~~~~~e~~~ 59 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD-------------------------------KQRRGFLAEALT 59 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH-------------------------------HHHHHHHHHHHH
Confidence 56999999999999875 35678999998754211 111223344444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~ 341 (704)
+...+| +++.-..-+.......++||||++|+.|.++... . ..-.++..++.+||+.|+
T Consensus 60 l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i 128 (266)
T cd05064 60 LGQFDH-----------SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY 128 (266)
T ss_pred HhcCCC-----------CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 433332 3332222233445678999999999999886432 1 112466778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
+|+|+||.||+++.++.++++|||.....
T Consensus 129 iH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 129 VHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred eeccccHhhEEEcCCCcEEECCCcccccc
Confidence 99999999999999999999999987653
No 205
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.68 E-value=3.6e-16 Score=162.94 Aligned_cols=135 Identities=16% Similarity=0.246 Sum_probs=96.6
Q ss_pred ccccccccceEEEEEEccCC-----cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG-----RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG-----~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|.....+ ..||+|+.+..... .....+.+|+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~-------------------------------~~~~~~~~ei 59 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEP-------------------------------KVQQEFRQEA 59 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCH-------------------------------HHHHHHHHHH
Confidence 57999999999999986544 67999987643211 1122344555
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------------------h
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------------------L 324 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------------------l 324 (704)
..+...+| +++.-..-+.......+++|||++|++|.++.... .
T Consensus 60 ~~l~~l~h-----------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 128 (283)
T cd05048 60 ELMSDLQH-----------PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128 (283)
T ss_pred HHHHhcCC-----------cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHH
Confidence 55544443 33322222333445678999999999998764321 1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.-.++..++.+||+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 129 ~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~ 175 (283)
T cd05048 129 IAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIY 175 (283)
T ss_pred HHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecc
Confidence 22567788999999999999999999999999999999999987653
No 206
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=7e-16 Score=151.98 Aligned_cols=163 Identities=23% Similarity=0.280 Sum_probs=103.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|+||+|++. +|+.||||+.+++.......+..++ ........ ..++..+. ......|
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~---------~~~~~~e 67 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGRK--KSNWRYLS---------RLWAEKE 67 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhH---HHHHhccC--Ccchhhhh---------hHHHHHH
Confidence 47999999999999986 8999999999986543222221111 00000000 01111111 1111223
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccC-----CChhhHHh---hhhHHHHHHHHHHHHHH-CCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEG-----QKLSEVKD---LYLIEVGVYCSFNQLLE-KGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G-----~~L~d~~~---~~l~e~~v~~~L~qLh~-~G~~H~D 345 (704)
.++..++.. ..+.+|+++. +...+++|||++| ..+.+... ......++..++.++|. .|++|+|
T Consensus 68 ~~~l~~l~~-----~~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~D 140 (187)
T cd05119 68 FRNLKRLYE-----AGVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGD 140 (187)
T ss_pred HHHHHHHHH-----cCCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence 333333332 2355676664 3567999999999 44443321 11223566778889999 9999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE 380 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~ 380 (704)
+||+||+++ ++.++++|||++.....+....+..
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~~~~~~~~~ 174 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDHPNAEEFLR 174 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccCcchHHHHH
Confidence 999999999 9999999999999887766555543
No 207
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.68 E-value=2.8e-16 Score=163.77 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=98.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|+.||+|+....... ....+.+.+|+..++.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 56 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD------------------------------KMVKKIAMREIRMLKQ 56 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc------------------------------chhhHHHHHHHHHHHh
Confidence 5799999999999999888999999986432111 0112334556666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ..+.+.++ +.......++||||++|..+.++... ...-.++..++.+||+.|++|+|
T Consensus 57 l~h-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~ 125 (286)
T cd07846 57 LRH-ENLVNLIE----------VFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRD 125 (286)
T ss_pred cCC-cchhhHHH----------hcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 544 12222211 22334567899999999888766421 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+||+++.++.++++|||++..+..
T Consensus 126 l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 126 IKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred CCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 999999999999999999999876543
No 208
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.68 E-value=9.1e-16 Score=159.45 Aligned_cols=134 Identities=18% Similarity=0.255 Sum_probs=95.5
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|+.+. +++.||||+.+..... +....+.+|+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~ 59 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-------------------------------DARKDFEREA 59 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-------------------------------HHHHHHHHHH
Confidence 569999999999998853 3578999997643211 1123334444
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------------------hHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------------------LIE 326 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------------------l~e 326 (704)
..+....| +++.-..-+.......+++|||++|++|.++.... ..-
T Consensus 60 ~~l~~l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 128 (280)
T cd05049 60 ELLTNFQH-----------ENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128 (280)
T ss_pred HHHHhcCC-----------CCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHH
Confidence 44443333 33332333444457789999999999998764310 112
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
.++..++.++|+.|++|+|++|+||+++.++.++++|||++..+
T Consensus 129 ~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~ 172 (280)
T cd05049 129 VQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV 172 (280)
T ss_pred HHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceec
Confidence 46677889999999999999999999999999999999998754
No 209
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.68 E-value=1.5e-15 Score=156.26 Aligned_cols=239 Identities=22% Similarity=0.279 Sum_probs=147.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.++.+|+.||+|+...+... +....+.+|++.+++
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-------------------------------AIQKQILRELDILHK 55 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-------------------------------HHHHHHHHHHHHHHH
Confidence 5799999999999999989999999998754211 122345566666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHH-CCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLE-KGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~-~G~~H 343 (704)
..| .++.+.++ .....+..+++|||++|.+|.++.... -.-.++..++.++|+ .|++|
T Consensus 56 ~~~-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H 124 (265)
T cd06605 56 CNS-PYIVGFYG----------AFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIH 124 (265)
T ss_pred CCC-Cchhhhhe----------eeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeec
Confidence 554 23333222 222346788999999999998875421 122466778899999 99999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|+||+||+++.+|.++++|||.+..+....... .....++++|+.-.. ..
T Consensus 125 ~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~------------------~~~~~~y~~PE~~~~-----------~~ 175 (265)
T cd06605 125 RDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT------------------FVGTSSYMAPERIQG-----------ND 175 (265)
T ss_pred CCCCHHHEEECCCCCEEEeecccchhhHHHHhhc------------------ccCChhccCHHHHcC-----------CC
Confidence 9999999999999999999999987654332211 011122333331100 01
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCC----ChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRI----PSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~i----P~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
++...|.|++|.++.++.... .++.- +......++.. .....|.. |. ...+++++
T Consensus 176 ~~~~~Dv~slG~~l~~l~~g~--~p~~~~~~~~~~~~~~~~~~------~~~~~~~~-------~~------~~~~~~~~ 234 (265)
T cd06605 176 YSVKSDIWSLGLSLIELATGR--FPYPPENDPPDGIFELLQYI------VNEPPPRL-------PS------GKFSPDFQ 234 (265)
T ss_pred CCchhhHHHHHHHHHHHHhCC--CCCCccccccccHHHHHHHH------hcCCCCCC-------Ch------hhcCHHHH
Confidence 122335556666555544311 12111 11111111111 11111110 10 01688899
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++.+++..||..|++..+-+.|+.+
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhhCchh
Confidence 99999999999999999888888765
No 210
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.68 E-value=1.3e-16 Score=172.11 Aligned_cols=232 Identities=19% Similarity=0.171 Sum_probs=151.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.|+||.||-++.+.||+.+|.|...+. .| +.-..|---++|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KK---Ri--------------------------------Kkr~ge~maLnE 235 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKK---RI--------------------------------KKRKGETMALNE 235 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHH---HH--------------------------------HHhhhhHHhhHH
Confidence 6799999999999999999999999975321 00 011123334455
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhH-----------HhhhhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEV-----------KDLYLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~-----------~~~~l~e~~v~~~L~qLh~~G~~H 343 (704)
....+++.. +.|+-....++.....+|||..++|++|.-- .+..+....+.|+|..||+.+|+.
T Consensus 236 k~iL~kV~s-----~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVY 310 (591)
T KOG0986|consen 236 KQILEKVSS-----PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVY 310 (591)
T ss_pred HHHHHHhcc-----CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceee
Confidence 555444332 3444444445667788999999999998532 123466689999999999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
||+||.|||+++.|++.|.|.|++.++++.... ..-+.+.||++|++-.. ..
T Consensus 311 RDLKPeNILLDd~GhvRISDLGLAvei~~g~~~-----------------~~rvGT~GYMAPEvl~n-----------e~ 362 (591)
T KOG0986|consen 311 RDLKPENILLDDHGHVRISDLGLAVEIPEGKPI-----------------RGRVGTVGYMAPEVLQN-----------EV 362 (591)
T ss_pred ccCChhheeeccCCCeEeeccceEEecCCCCcc-----------------ccccCcccccCHHHHcC-----------Cc
Confidence 999999999999999999999999998875431 11234567777664322 23
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
|+.+.|+|++|+++.++...- -||+--.+- +- -|-+-+.. .--.+.|| ...|++++++++
T Consensus 363 Y~~s~Dwf~lGCllYemi~G~--sPFr~~KeK--vk-----~eEvdrr~----~~~~~ey~-------~kFS~eakslc~ 422 (591)
T KOG0986|consen 363 YDFSPDWFSLGCLLYEMIAGH--SPFRQRKEK--VK-----REEVDRRT----LEDPEEYS-------DKFSEEAKSLCE 422 (591)
T ss_pred ccCCccHHHHHhHHHHHHccc--Cchhhhhhh--hh-----HHHHHHHH----hcchhhcc-------cccCHHHHHHHH
Confidence 566677777777776665421 111110000 00 00000000 00011122 357999999999
Q ss_pred HhhhccccCCC
Q 005274 504 ALLYKEGVFRI 514 (704)
Q Consensus 504 ~lL~~d~~~R~ 514 (704)
.+|.+||.+|.
T Consensus 423 ~LL~Kdp~~RL 433 (591)
T KOG0986|consen 423 GLLTKDPEKRL 433 (591)
T ss_pred HHHccCHHHhc
Confidence 99999999886
No 211
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.68 E-value=5.8e-16 Score=158.63 Aligned_cols=238 Identities=17% Similarity=0.166 Sum_probs=142.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+++|.|++|.||+|+.+.+|+.||||........ ....+.+.+|+..++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS------------------------------RRERKAAEQEAQLLSQ 55 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC------------------------------HHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999987521100 0111233445544444
Q ss_pred HhhHHHHHHHhcCCcceee-ceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLI-PEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~v-P~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.. ...+.......+++|||++|+++.+.... ...-.++..++.++|+.|++
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~ 124 (257)
T cd08223 56 LKH-----------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124 (257)
T ss_pred CCC-----------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 433 33222 12222223356899999999998876431 01125667788999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|+|++|.||+++.++.++++|||++..+....... .....+..+++|+.-. ..
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~----------------~~~~~~~~y~aPE~~~-----------~~ 177 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA----------------STLIGTPYYMSPELFS-----------NK 177 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceEEecccCCcc----------------ccccCCcCccChhHhc-----------CC
Confidence 99999999999999999999999987653221100 0001123344444211 01
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
..+...|.|++|.++.++... +.++.-. ........+ ..|. -|. +....++++.+++
T Consensus 178 ~~~~~~Dv~slG~il~~l~~g--~~~~~~~-~~~~~~~~~--~~~~----~~~--------------~~~~~~~~~~~li 234 (257)
T cd08223 178 PYNYKSDVWALGCCVYEMATL--KHAFNAK-DMNSLVYRI--IEGK----LPP--------------MPKDYSPELGELI 234 (257)
T ss_pred CCCchhhhHHHHHHHHHHHcC--CCCCCCC-CHHHHHHHH--HhcC----CCC--------------CccccCHHHHHHH
Confidence 122234566666666555542 1222211 111111111 1110 011 1124678899999
Q ss_pred HHhhhccccCCCCHHHHHhhh
Q 005274 503 VALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 503 ~~lL~~d~~~R~~rle~Ll~~ 523 (704)
.+|+..||..|++..+.+.|+
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~~ 255 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILRQP 255 (257)
T ss_pred HHHhccCcccCCCHHHHhcCC
Confidence 999999999999988777664
No 212
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.68 E-value=1.2e-15 Score=156.35 Aligned_cols=240 Identities=20% Similarity=0.269 Sum_probs=148.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.|+||+.+++... .....+..|+..+..
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-------------------------------EFRKQLLRELKTLRS 55 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-------------------------------HHHHHHHHHHHHHHh
Confidence 6799999999999999988999999998754221 111233344444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH-CCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
.+| +++.-...+.......+++|||++|++|.++... .-.-.++..++.++|+ .|++|+
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~ 124 (264)
T cd06623 56 CES-----------PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHR 124 (264)
T ss_pred cCC-----------CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 332 3332222233445678999999999999887542 1122567788999999 999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|++|+||+++.+|.++++|||++..+....... ........+++|+.... ...
T Consensus 125 ~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~----------------~~~~~~~~y~~pE~~~~-----------~~~ 177 (264)
T cd06623 125 DIKPSNLLINSKGEVKIADFGISKVLENTLDQC----------------NTFVGTVTYMSPERIQG-----------ESY 177 (264)
T ss_pred CCCHHHEEECCCCCEEEccCccceecccCCCcc----------------cceeecccccCHhhhCC-----------CCC
Confidence 999999999999999999999988765432110 00001122233321100 011
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCCh--hHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC-CChHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPS--YFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD-SSPQLKSS 501 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~--~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d-~sp~lr~l 501 (704)
+...|.|++|.++.++... ..++.... .+....+.+ .....|.. ..+ .++.++++
T Consensus 178 ~~~~Dv~slG~il~~l~tg--~~p~~~~~~~~~~~~~~~~------~~~~~~~~--------------~~~~~~~~l~~l 235 (264)
T cd06623 178 SYAADIWSLGLTLLECALG--KFPFLPPGQPSFFELMQAI------CDGPPPSL--------------PAEEFSPEFRDF 235 (264)
T ss_pred CchhhHHHHHHHHHHHHhC--CCCCccccccCHHHHHHHH------hcCCCCCC--------------CcccCCHHHHHH
Confidence 2234555666665555531 12222221 222222221 11111111 123 67889999
Q ss_pred HHHhhhccccCCCCHHHHHhhhhH
Q 005274 502 LVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++.||..+|..|++..+-+-|+.+
T Consensus 236 i~~~l~~~p~~R~~~~~ll~~~~~ 259 (264)
T cd06623 236 ISACLQKDPKKRPSAAELLQHPFI 259 (264)
T ss_pred HHHHccCChhhCCCHHHHHhCHHH
Confidence 999999999999999888888765
No 213
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.68 E-value=5.7e-16 Score=159.35 Aligned_cols=138 Identities=19% Similarity=0.241 Sum_probs=100.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|..+.+|+.||+|..++.... -......+.+|+..++.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~~~~~~~~~ei~~l~~ 58 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-----------------------------DAKARQDCLKEIDLLKQ 58 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-----------------------------chhhHHHHHHHHHHHHh
Confidence 5799999999999999989999999987631100 00112345566665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qLh~~G~ 341 (704)
.+| +++.-+.-+.......+++|||++|++|.++... .+ .-.++..++.+||+.|+
T Consensus 59 ~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 127 (267)
T cd08224 59 LDH-----------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI 127 (267)
T ss_pred CCC-----------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 544 3333333333445677899999999999876421 01 12466778899999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+|++|.||+++.+|.++++|||++..+..
T Consensus 128 ~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 128 MHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999999999999999999876543
No 214
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.68 E-value=3.4e-16 Score=165.38 Aligned_cols=247 Identities=20% Similarity=0.209 Sum_probs=148.6
Q ss_pred hhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHH
Q 005274 186 DELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSL 265 (704)
Q Consensus 186 ~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l 265 (704)
.+.+..+ ..||.|++|.||+|....+|..||||+...... .-.+.+
T Consensus 21 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--------------------------------~~~~~~ 66 (292)
T cd06658 21 REYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ--------------------------------QRRELL 66 (292)
T ss_pred HHHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchH--------------------------------HHHHHH
Confidence 3445544 469999999999999988999999998642110 111234
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHH
Q 005274 266 FRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 266 ~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh 337 (704)
.+|+..++..+| .++...++ +.......+++|||++|+.|.++... ...-.++..++.++|
T Consensus 67 ~~e~~~l~~l~h-~~ii~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH 135 (292)
T cd06658 67 FNEVVIMRDYHH-ENVVDMYN----------SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH 135 (292)
T ss_pred HHHHHHHHhCCC-CcHHHHHH----------heecCCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 556655555544 23333222 12234677999999999999876421 112256778899999
Q ss_pred HCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 338 EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
+.|++|+|++|.||+++.++.++++|||++..+........ ....+..+++|+...
T Consensus 136 ~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~----------------~~~~~~~y~aPE~~~-------- 191 (292)
T cd06658 136 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK----------------SLVGTPYWMAPEVIS-------- 191 (292)
T ss_pred HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCc----------------eeecCccccCHHHHc--------
Confidence 99999999999999999999999999999865433211000 000122333333110
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
....+...|.|++|.++.++... ..++........+ +. +.....+.+.. ....++.
T Consensus 192 ---~~~~~~~~Dv~slGvil~el~~g--~~p~~~~~~~~~~-~~------~~~~~~~~~~~------------~~~~~~~ 247 (292)
T cd06658 192 ---RLPYGTEVDIWSLGIMVIEMIDG--EPPYFNEPPLQAM-RR------IRDNLPPRVKD------------SHKVSSV 247 (292)
T ss_pred ---cCCCCchhhHHHHHHHHHHHHhC--CCCCCCCCHHHHH-HH------HHhcCCCcccc------------ccccCHH
Confidence 00112223455666555555431 1222221111111 11 11111111110 1235778
Q ss_pred HHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 498 LKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++++.|+..||..|++.-+.+.|+.+
T Consensus 248 ~~~li~~~l~~~P~~Rpt~~~il~~~~~ 275 (292)
T cd06658 248 LRGFLDLMLVREPSQRATAQELLQHPFL 275 (292)
T ss_pred HHHHHHHHccCChhHCcCHHHHhhChhh
Confidence 9999999999999999999888888776
No 215
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.68 E-value=1e-15 Score=159.81 Aligned_cols=252 Identities=17% Similarity=0.197 Sum_probs=150.2
Q ss_pred hhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHH
Q 005274 186 DELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSL 265 (704)
Q Consensus 186 ~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l 265 (704)
+|.|+.. +.||.|++|.||+|..+.+|..|++|....+.... ...+
T Consensus 4 ~~~~~i~--~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------~~~~ 49 (282)
T cd06643 4 EEFWEII--GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE--------------------------------LEDY 49 (282)
T ss_pred HHHHHHH--hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH--------------------------------HHHH
Confidence 4455444 56999999999999999899999999976432110 1223
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHH
Q 005274 266 FRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQ 335 (704)
Q Consensus 266 ~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~q 335 (704)
..|+..++...| +++.-..-+.......++||||++|+.+...... ...-.++..++.+
T Consensus 50 ~~e~~~l~~l~h-----------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~ 118 (282)
T cd06643 50 MVEIDILASCDH-----------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNY 118 (282)
T ss_pred HHHHHHHHHCCC-----------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 334444433332 3433222233445678999999999998775321 1122567788999
Q ss_pred HHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 336 LLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
||+.|++|+|++|.||+++.+|+++++|||++.......... + ....+..+++|+.-....
T Consensus 119 LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~-----~~~~~~~y~aPE~~~~~~--- 179 (282)
T cd06643 119 LHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR-----------D-----SFIGTPYWMAPEVVMCET--- 179 (282)
T ss_pred HHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccc-----------c-----cccccccccCHhhccccC---
Confidence 999999999999999999999999999999987643221100 0 001123444444211000
Q ss_pred HHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCC
Q 005274 416 LTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSS 495 (704)
Q Consensus 416 L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~s 495 (704)
.-...++...|.|++|.++.++... ..++.-......+... .....|.. ..| ...+
T Consensus 180 ---~~~~~~~~~~Dv~slGvil~el~~g--~~p~~~~~~~~~~~~~-------~~~~~~~~-----~~~-------~~~~ 235 (282)
T cd06643 180 ---SKDRPYDYKADVWSLGITLIEMAQI--EPPHHELNPMRVLLKI-------AKSEPPTL-----AQP-------SRWS 235 (282)
T ss_pred ---CCCCCCCccchhhhHHHHHHHHccC--CCCccccCHHHHHHHH-------hhcCCCCC-----CCc-------cccC
Confidence 0001122345677777777666431 1122111111111111 11111111 011 2356
Q ss_pred hHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 496 PQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 496 p~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.++++++++++.+||..|++.-+.+.|+.+
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 265 (282)
T cd06643 236 SEFKDFLKKCLEKNVDARWTTTQLLQHPFV 265 (282)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCCCE
Confidence 789999999999999999999888888765
No 216
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.68 E-value=2.6e-15 Score=151.68 Aligned_cols=237 Identities=19% Similarity=0.242 Sum_probs=144.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+.+.+|+.|++|+.++...+ ....+.+|+..++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 53 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE--------------------------------KKEKIINEIQILKK 53 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh--------------------------------HHHHHHHHHHHHHh
Confidence 6799999999999999888999999998754320 11233344444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++....-........+++|||++|++|.++.... ..-.++..++.++|+.|++|+
T Consensus 54 l~~-----------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~ 122 (253)
T cd05122 54 CKH-----------PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHR 122 (253)
T ss_pred CCC-----------CCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecC
Confidence 332 34333333344457789999999999998874321 122566778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|++|+||+++++|.++++|||.+..+....... ......++++|+.-.. ...
T Consensus 123 dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~-----------------~~~~~~~~~~PE~~~~-----------~~~ 174 (253)
T cd05122 123 DIKAANILLTSDGEVKLIDFGLSAQLSDTKARN-----------------TMVGTPYWMAPEVING-----------KPY 174 (253)
T ss_pred CCCHHHEEEccCCeEEEeecccccccccccccc-----------------ceecCCcccCHHHHcC-----------CCC
Confidence 999999999999999999999998776543100 0011223333332100 011
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++... ..++.-......+.. .....-|... .+ ...++++++++++
T Consensus 175 ~~~~Dv~slG~il~~l~~g--~~p~~~~~~~~~~~~-------~~~~~~~~~~-----~~-------~~~~~~~~~~i~~ 233 (253)
T cd05122 175 DYKADIWSLGITAIELAEG--KPPYSELPPMKALFK-------IATNGPPGLR-----NP-------EKWSDEFKDFLKK 233 (253)
T ss_pred CccccHHHHHHHHHHHHhC--CCCCCCCchHHHHHH-------HHhcCCCCcC-----cc-------cccCHHHHHHHHH
Confidence 2234556666666555431 112211111111110 0111111100 00 1137789999999
Q ss_pred hhhccccCCCCHHHHHhhh
Q 005274 505 LLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 505 lL~~d~~~R~~rle~Ll~~ 523 (704)
+|..||..|++..+.|.|+
T Consensus 234 ~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 234 CLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred HccCChhhCCCHHHHhcCC
Confidence 9999999999998877764
No 217
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.68 E-value=2e-15 Score=157.21 Aligned_cols=135 Identities=19% Similarity=0.180 Sum_probs=94.4
Q ss_pred ccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|+||+|.++ .++..||||+.+..... .-...+.+|+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-------------------------------~~~~~~~~e~ 60 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM-------------------------------RERIEFLNEA 60 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH-------------------------------HHHHHHHHHH
Confidence 56999999999999864 24578999987542110 0011233444
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------------hh--HHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------------YL--IEVGVY 330 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------------~l--~e~~v~ 330 (704)
..++..+| +++.-..-+....+..++||||++|++|.++... .+ .-.++.
T Consensus 61 ~~l~~l~~-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 129 (277)
T cd05062 61 SVMKEFNC-----------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIA 129 (277)
T ss_pred HHHHhCCC-----------CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHH
Confidence 44433322 4443333334455678999999999999876431 01 124677
Q ss_pred HHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++.+||+.|++|+|+||.||+++.++.++++|||++..+.
T Consensus 130 ~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 170 (277)
T cd05062 130 DGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 170 (277)
T ss_pred HHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccC
Confidence 78999999999999999999999999999999999987553
No 218
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.68 E-value=1.5e-15 Score=156.92 Aligned_cols=134 Identities=18% Similarity=0.221 Sum_probs=98.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|..+.+++.||+|+...+... ...+.+|++.++.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~---------------------------------~~~~~~e~~~l~~ 58 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---------------------------------VEEFLKEAAVMKE 58 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH---------------------------------HHHHHHHHHHHHh
Confidence 5799999999999999989999999997643110 1223456666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| ..+.+. .-+.......+++|||++|++|.+.... ...-.++..++.+||+.|++|
T Consensus 59 l~h-~~i~~~----------~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 127 (263)
T cd05052 59 IKH-PNLVQL----------LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127 (263)
T ss_pred CCC-CChhhe----------EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 544 122221 1123345667899999999999886431 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+||.||++++++.++++|||++.....
T Consensus 128 ~dlkp~nil~~~~~~~kl~df~~~~~~~~ 156 (263)
T cd05052 128 RDLAARNCLVGENHLVKVADFGLSRLMTG 156 (263)
T ss_pred cccCcceEEEcCCCcEEeCCCcccccccc
Confidence 99999999999999999999999877654
No 219
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.68 E-value=7.2e-16 Score=166.83 Aligned_cols=137 Identities=23% Similarity=0.281 Sum_probs=97.1
Q ss_pred ccccccccceEEEEEE-----ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARL-----RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~l-----k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|+||.||+|+. ..+|+.||||+.+.+... +....+.+|+
T Consensus 13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------~~~~~~~~E~ 61 (343)
T cd05103 13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-------------------------------SEHRALMSEL 61 (343)
T ss_pred ccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-------------------------------HHHHHHHHHH
Confidence 5799999999999984 246889999998754211 1113455666
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--------------------------
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------------------- 323 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------------------- 323 (704)
..+..+.|..++.+.++ .+.......+++|||++|++|.++....
T Consensus 62 ~~l~~l~~h~niv~~~~---------~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (343)
T cd05103 62 KILIHIGHHLNVVNLLG---------ACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISE 132 (343)
T ss_pred HHHHhccCCccHhhhcc---------eeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhh
Confidence 66666644333333222 1222234568999999999998764210
Q ss_pred --------------------------------------------------hHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 005274 324 --------------------------------------------------LIEVGVYCSFNQLLEKGFYHADPHPGNLFR 353 (704)
Q Consensus 324 --------------------------------------------------l~e~~v~~~L~qLh~~G~~H~DphPgNILv 353 (704)
....++..++.++|+.|++|+|+||.||++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~ 212 (343)
T cd05103 133 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL 212 (343)
T ss_pred hhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE
Confidence 012466778999999999999999999999
Q ss_pred ecCCcEEEEecCCccccC
Q 005274 354 SYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 354 ~~dG~l~liDFGl~~~l~ 371 (704)
+.++.++++|||++..+.
T Consensus 213 ~~~~~~kl~dfg~~~~~~ 230 (343)
T cd05103 213 SENNVVKICDFGLARDIY 230 (343)
T ss_pred cCCCcEEEEecccccccc
Confidence 999999999999987653
No 220
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.68 E-value=5.2e-16 Score=170.48 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=96.3
Q ss_pred ccccccccceEEEEEEccCC-----cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG-----RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG-----~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||+|+||.||+|+...+| +.||||+.+..... +....+.+|+
T Consensus 44 ~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------~~~~~~~~E~ 92 (374)
T cd05106 44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-------------------------------DEREALMSEL 92 (374)
T ss_pred heecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-------------------------------HHHHHHHHHH
Confidence 67999999999999865443 57999998643211 1112344455
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--------------------------
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------------------- 323 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------------------- 323 (704)
..+.... .+++|.-..-+.......+++|||++|++|.++....
T Consensus 93 ~il~~l~----------~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
T cd05106 93 KILSHLG----------QHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITL 162 (374)
T ss_pred HHHHhhc----------cCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccch
Confidence 5444331 2344433333344556789999999999998764210
Q ss_pred -----------------------------------------------------hHHHHHHHHHHHHHHCCccccCCCCCc
Q 005274 324 -----------------------------------------------------LIEVGVYCSFNQLLEKGFYHADPHPGN 350 (704)
Q Consensus 324 -----------------------------------------------------l~e~~v~~~L~qLh~~G~~H~DphPgN 350 (704)
-.-.++..++.+||+.|++|||+||.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~N 242 (374)
T cd05106 163 EKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARN 242 (374)
T ss_pred hcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchhe
Confidence 012467778999999999999999999
Q ss_pred EEEecCCcEEEEecCCccccC
Q 005274 351 LFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 351 ILv~~dG~l~liDFGl~~~l~ 371 (704)
|+++.++.++++|||++..+.
T Consensus 243 il~~~~~~~kL~DfGla~~~~ 263 (374)
T cd05106 243 VLLTDGRVAKICDFGLARDIM 263 (374)
T ss_pred EEEeCCCeEEEeeceeeeecc
Confidence 999999999999999987654
No 221
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.67 E-value=2.9e-15 Score=154.09 Aligned_cols=133 Identities=14% Similarity=0.235 Sum_probs=97.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|.+. ++..||||+.+++... .+.+.+|+..++.
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---------------------------------~~~~~~e~~~l~~ 57 (261)
T cd05034 12 RKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---------------------------------PEAFLQEAQIMKK 57 (261)
T ss_pred eeeccCcceEEEEEEEc-CCceEEEEEecCCccC---------------------------------HHHHHHHHHHHhh
Confidence 57999999999999986 6788999998753211 1223445555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+.......+++|||++|++|.+.... ...-.++..++.++|+.|++|
T Consensus 58 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h 126 (261)
T cd05034 58 LRH-----------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIH 126 (261)
T ss_pred CCC-----------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 433 3332222233444678999999999999876421 112256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+||+||+++.++.++++|||.+..+..
T Consensus 127 ~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 127 RDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred CCcchheEEEcCCCCEEECccccceeccc
Confidence 99999999999999999999999887653
No 222
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.67 E-value=7.7e-16 Score=157.39 Aligned_cols=236 Identities=18% Similarity=0.207 Sum_probs=145.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.|++|..+... . ...+.+|++.++.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------------------------------~-~~~~~~e~~~~~~ 54 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------------------------------D-LQEIIKEISILKQ 54 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------------------------------H-HHHHHHHHHHHHh
Confidence 46999999999999998889999999976321 0 2344455555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......+++|||++|++|.++... ...-.++..++.+||..|++|+
T Consensus 55 l~~-----------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~ 123 (256)
T cd06612 55 CDS-----------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHR 123 (256)
T ss_pred CCC-----------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 433 3433222233344678899999999999887431 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|++|+||+++.+|.++++|||++..+........ ....+.++++|+.-.. ..+
T Consensus 124 dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~----------------~~~~~~~y~~PE~~~~-----------~~~ 176 (256)
T cd06612 124 DIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN----------------TVIGTPFWMAPEVIQE-----------IGY 176 (256)
T ss_pred CCCcceEEECCCCcEEEcccccchhcccCccccc----------------cccCCccccCHHHHhc-----------CCC
Confidence 9999999999999999999999887654321100 0011233444432100 112
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
+...|.|++|.++.++... ..++....... .. .-+.....+.+.. | ...++++.+++..
T Consensus 177 ~~~~Di~s~G~il~~l~~g--~~p~~~~~~~~----~~---~~~~~~~~~~~~~-----~-------~~~~~~~~~~i~~ 235 (256)
T cd06612 177 NNKADIWSLGITAIEMAEG--KPPYSDIHPMR----AI---FMIPNKPPPTLSD-----P-------EKWSPEFNDFVKK 235 (256)
T ss_pred CchhhHHHHHHHHHHHHhC--CCCCCCcchhh----hh---hhhccCCCCCCCc-----h-------hhcCHHHHHHHHH
Confidence 2234556666666665542 11221111110 00 0000111111111 1 2356789999999
Q ss_pred hhhccccCCCCHHHHHhhh
Q 005274 505 LLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 505 lL~~d~~~R~~rle~Ll~~ 523 (704)
++..||..|++..+.|.|+
T Consensus 236 ~l~~~P~~Rps~~~il~~~ 254 (256)
T cd06612 236 CLVKDPEERPSAIQLLQHP 254 (256)
T ss_pred HHhcChhhCcCHHHHhcCC
Confidence 9999999999988877765
No 223
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.67 E-value=1.3e-15 Score=159.95 Aligned_cols=253 Identities=17% Similarity=0.156 Sum_probs=149.2
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+.+.|... +.||.|++|.||+|++..+|+.|++|+......+ ....
T Consensus 10 ~~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~--------------------------------~~~~ 55 (292)
T cd06644 10 PNEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEE--------------------------------ELED 55 (292)
T ss_pred cchhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHH--------------------------------HHHH
Confidence 45666655 4599999999999999989999999997643211 1122
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFN 334 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~ 334 (704)
+.+|+..+...+| +++....-.....+..++||||++|+.+...... ...-.++..++.
T Consensus 56 ~~~e~~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~ 124 (292)
T cd06644 56 YMVEIEILATCNH-----------PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQ 124 (292)
T ss_pred HHHHHHHHHhCCC-----------CcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 3334333333322 3333322233456778999999999998765321 112256778899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHH
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTK 414 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~ 414 (704)
+||+.|++|+|+||.||+++.+|.++++|||++......... .. ....+..+++|+.-...-
T Consensus 125 ~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~-------------~~---~~~~~~~y~aPE~~~~~~-- 186 (292)
T cd06644 125 YLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR-------------RD---SFIGTPYWMAPEVVMCET-- 186 (292)
T ss_pred HHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc-------------cc---eecCCccccCceeecccc--
Confidence 999999999999999999999999999999987654321100 00 001123445554321000
Q ss_pred HHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCC
Q 005274 415 ALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDS 494 (704)
Q Consensus 415 ~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~ 494 (704)
.-...++...|.|++|.++.++.... .++..-... +... -+.....|.... ....
T Consensus 187 ----~~~~~~~~~~Dv~slG~il~el~~g~--~p~~~~~~~----~~~~---~~~~~~~~~~~~------------~~~~ 241 (292)
T cd06644 187 ----MKDTPYDYKADIWSLGITLIEMAQIE--PPHHELNPM----RVLL---KIAKSEPPTLSQ------------PSKW 241 (292)
T ss_pred ----ccCCCCCchhhhHhHHHHHHHHhcCC--CCCccccHH----HHHH---HHhcCCCccCCC------------Cccc
Confidence 00001222346677777766655321 111110000 0000 001111111110 1245
Q ss_pred ChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 495 SPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 495 sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++.++++++|..||..|++.-+-+-|+.+
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 6789999999999999999998777777665
No 224
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.67 E-value=1.7e-16 Score=165.53 Aligned_cols=243 Identities=14% Similarity=0.097 Sum_probs=143.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|++|+||+|+++.+|+.||+|+....-.. ...+..|+..+..
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~---------------------------------~~~~~~e~~~l~~ 68 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE---------------------------------EEEIKLEINMLKK 68 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH---------------------------------HHHHHHHHHHHHH
Confidence 5799999999999999989999999997532100 0122233333333
Q ss_pred HhhHHHHHHHhcCCcceeeceeee------ecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV------EQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~------e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh 337 (704)
.. +++++.-...++ +.....+++|||+.|++|.++... ...-.++..++.+||
T Consensus 69 ~~----------~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 69 YS----------HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred hc----------CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22 223332211111 123456899999999999876532 112246778899999
Q ss_pred HCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 338 EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
+.|++|+|+||.||+++.++.++++|||++..+...... .. ....+.++++|+.-...
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~-------------~~---~~~~~~~y~aPE~l~~~------ 196 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-------------RN---TFIGTPYWMAPEVIACD------ 196 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccC-------------CC---cccccccccCHhhcCcc------
Confidence 999999999999999999999999999998765322110 00 00112334444421100
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.-....++...|.|++|.++.++... ..++........+. .+.....+. ....+.+++
T Consensus 197 ~~~~~~~~~~~DvwslG~~l~el~~g--~~p~~~~~~~~~~~-------~~~~~~~~~-------------~~~~~~~~~ 254 (282)
T cd06636 197 ENPDATYDYRSDIWSLGITAIEMAEG--APPLCDMHPMRALF-------LIPRNPPPK-------------LKSKKWSKK 254 (282)
T ss_pred cCcCcCCCcccchhHHHHHHHHHHhC--CCCccccCHHhhhh-------hHhhCCCCC-------------CcccccCHH
Confidence 00001122335677777777776642 22221111111110 000111111 011356789
Q ss_pred HHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 498 LKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
+.++++++|..||..|.+..|-|.|+.
T Consensus 255 ~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 255 FIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred HHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 999999999999999999988777653
No 225
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.67 E-value=2.2e-15 Score=156.56 Aligned_cols=134 Identities=18% Similarity=0.199 Sum_probs=93.5
Q ss_pred ccccccccceEEEEEEccCCcE--EEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRV--VAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~--VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||+|++|.||+|+++.+|.. |++|..+..... +....+..|+..+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~~~~~~E~~~l 49 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-------------------------------DDHRDFAGELEVL 49 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH-------------------------------HHHHHHHHHHHHH
Confidence 3689999999999999877764 678876532111 1112334455544
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------------------hhHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------------------YLIEV 327 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------------------~l~e~ 327 (704)
.+.. +++++.-..-+....+..+++|||++|++|.++... ...-.
T Consensus 50 ~~l~----------~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 119 (270)
T cd05047 50 CKLG----------HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119 (270)
T ss_pred Hhhc----------cCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHH
Confidence 4442 224433222233445667899999999999876421 11124
Q ss_pred HHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 328 GVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 328 ~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
++..++.++|+.|++|+|++|.||+++.++.++++|||++..
T Consensus 120 ~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~ 161 (270)
T cd05047 120 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 161 (270)
T ss_pred HHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccc
Confidence 567789999999999999999999999999999999999753
No 226
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.67 E-value=1.5e-15 Score=155.91 Aligned_cols=132 Identities=20% Similarity=0.220 Sum_probs=98.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.. .|+.||||+.+.... ..+.+..|+..++.
T Consensus 12 ~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---------------------------------~~~~~~~e~~~l~~ 56 (256)
T cd05039 12 ATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---------------------------------AAQAFLAEASVMTT 56 (256)
T ss_pred eeeecCCCceEEEEEe--cCcEEEEEEeccchh---------------------------------HHHHHHHHHHHHHh
Confidence 5799999999999997 589999999763311 12345556666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+....+..+++|||++|++|.++... ...-.++..++.+||+.|++|
T Consensus 57 l~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 125 (256)
T cd05039 57 LRH-----------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVH 125 (256)
T ss_pred cCC-----------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 544 3333222233336778999999999999887432 112256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+||+||+++.+|.++++|||.+.....
T Consensus 126 ~di~p~Nili~~~~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 126 RDLAARNVLVSEDLVAKVSDFGLAKEASQ 154 (256)
T ss_pred hhcccceEEEeCCCCEEEccccccccccc
Confidence 99999999999999999999999887643
No 227
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.67 E-value=1.3e-15 Score=161.84 Aligned_cols=137 Identities=17% Similarity=0.237 Sum_probs=97.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+...+|+.||||...+..... ....+.+..|+..++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~ 57 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK-----------------------------RNKVKRVLTEQEILAT 57 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch-----------------------------HHHHHHHHHHHHHHHh
Confidence 56999999999999998889999999986531110 0111233334333332
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----h-------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----Y-------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~-------l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-..+.....+++|||+.|++|.++... . ..-.++..++.+||..|++|
T Consensus 58 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 126 (316)
T cd05574 58 LDH-----------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVY 126 (316)
T ss_pred CCC-----------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 222 3332222234456678999999999999887432 1 11256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+||.||+++.+|.++++|||++....
T Consensus 127 ~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 127 RDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred cCCChHHeEEcCCCCEEEeecchhhccc
Confidence 9999999999999999999999987654
No 228
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.67 E-value=1.1e-15 Score=160.42 Aligned_cols=135 Identities=19% Similarity=0.230 Sum_probs=97.1
Q ss_pred ccccccccceEEEEEEccCC----------------cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG----------------RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVV 258 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG----------------~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~iv 258 (704)
+.||.|+||.||+|++..++ ..||+|+.+.+...
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~------------------------------ 60 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD------------------------------ 60 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH------------------------------
Confidence 56999999999999886543 56899998754221
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---------------
Q 005274 259 DEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--------------- 323 (704)
Q Consensus 259 de~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--------------- 323 (704)
.....+.+|+..++..+| +++.-..-++......+++|||++|++|.++....
T Consensus 61 -~~~~~~~~e~~~l~~l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (296)
T cd05051 61 -NAREDFLKEVKILSRLSD-----------PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS 128 (296)
T ss_pred -HHHHHHHHHHHHHHhcCC-----------CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCC
Confidence 112344556665555544 33332222334446789999999999998764221
Q ss_pred -----hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 324 -----LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 324 -----l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
..-.++..++.+||+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 129 ~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 181 (296)
T cd05051 129 FSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY 181 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecc
Confidence 122566778999999999999999999999999999999999987653
No 229
>PHA02988 hypothetical protein; Provisional
Probab=99.67 E-value=1.5e-15 Score=159.96 Aligned_cols=236 Identities=14% Similarity=0.123 Sum_probs=143.6
Q ss_pred cCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 192 ~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
.+...||.|++|.||+|++ +|+.||||+.+..... ..++.+.+.+|++.
T Consensus 23 ~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~-----------------------------~~~~~~~~~~E~~~ 71 (283)
T PHA02988 23 YTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKG-----------------------------HKVLIDITENEIKN 71 (283)
T ss_pred CCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccc-----------------------------cHHHHHHHHHHHHH
Confidence 3345799999999999998 7999999998643111 01222345566666
Q ss_pred HHHHhhHHHHHHHhcCCcceeec-eeeee---cccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHH
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIP-EMYVE---QTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP-~v~~e---~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~ 338 (704)
+...+| ++|.-- ..+.+ .....+++|||++|++|.++... .-...++..++.++|.
T Consensus 72 l~~l~h-----------~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~ 140 (283)
T PHA02988 72 LRRIDS-----------NNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYK 140 (283)
T ss_pred HHhcCC-----------CCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 655554 332211 11212 13467899999999999987532 1122466778999998
Q ss_pred -CCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHH
Q 005274 339 -KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 339 -~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~ 417 (704)
.|++|+|++|.||+++.+|.++++|||++..++.... ....+.++.+|+.-..
T Consensus 141 ~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-------------------~~~~~~~y~aPE~~~~------- 194 (283)
T PHA02988 141 YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-------------------KNVNFMVYFSYKMLND------- 194 (283)
T ss_pred cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-------------------cccCcccccCHHHhhh-------
Confidence 5999999999999999999999999999875432210 0011233444442111
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQ 497 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~ 497 (704)
.+ ..++...|.|++|.++.++... ..||.--. ...+.+.+. . ..+.+.+ | .+.+++
T Consensus 195 -~~-~~~~~k~Di~SlGvil~el~~g--~~Pf~~~~-~~~~~~~i~--~-----~~~~~~~-----~-------~~~~~~ 250 (283)
T PHA02988 195 -IF-SEYTIKDDIYSLGVVLWEIFTG--KIPFENLT-TKEIYDLII--N-----KNNSLKL-----P-------LDCPLE 250 (283)
T ss_pred -cc-ccccchhhhhHHHHHHHHHHHC--CCCCCCCC-HHHHHHHHH--h-----cCCCCCC-----C-------CcCcHH
Confidence 00 1233455777888777777652 23332111 111111111 0 0111111 1 245788
Q ss_pred HHHHHHHhhhccccCCCCHHHH
Q 005274 498 LKSSLVALLYKEGVFRIDRLES 519 (704)
Q Consensus 498 lr~lL~~lL~~d~~~R~~rle~ 519 (704)
+++++.+++.+||..|.+.-+-
T Consensus 251 l~~li~~cl~~dp~~Rps~~el 272 (283)
T PHA02988 251 IKCIVEACTSHDSIKRPNIKEI 272 (283)
T ss_pred HHHHHHHHhcCCcccCcCHHHH
Confidence 9999999999999999876553
No 230
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.67 E-value=1.2e-15 Score=155.72 Aligned_cols=137 Identities=18% Similarity=0.268 Sum_probs=99.0
Q ss_pred ccccccccceEEEEEEccCC----cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG----RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG----~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||.|++|+||+|+...++ ..||+|+.+++... +..+.+..|+.
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~~ 53 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE-------------------------------QQIEEFLREAR 53 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh-------------------------------HHHHHHHHHHH
Confidence 57999999999999998666 89999998765321 11234455666
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-h---hHH-------HHHHHHHHHHHHC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-Y---LIE-------VGVYCSFNQLLEK 339 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~---l~e-------~~v~~~L~qLh~~ 339 (704)
.++...| +++.-...+....+..+++|||++|++|.+.... . +.+ .++..++.++|+.
T Consensus 54 ~l~~l~~-----------~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~ 122 (258)
T smart00219 54 IMRKLDH-----------PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122 (258)
T ss_pred HHHhcCC-----------CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 5555433 3322111123334678999999999999877432 1 221 4566778899999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
|++|+|++|+||+++.+|.++++|||++......
T Consensus 123 ~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999999999999999999999998876543
No 231
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.67 E-value=6.2e-16 Score=158.20 Aligned_cols=134 Identities=21% Similarity=0.345 Sum_probs=97.9
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|++|+||+|+...+|+.|++|+..+.... .......+.+|++.+...+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~~~ 51 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-----------------------------RKNQVDQVLTERDILSQAQ 51 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-----------------------------hhhHHHHHHHHHHHHHhCC
Confidence 68999999999999888999999997643110 0122345566666666655
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--h-------hHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--Y-------LIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~-------l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
| .++.+.+. ........+++|||++|++|.++... . ..-.++..++.+||+.|++|+|++
T Consensus 52 h-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 52 S-PYVVKLYY----------SFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred C-cchhHHHH----------heecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 4 22332221 11234567899999999999876432 1 122567788999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCcccc
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l 370 (704)
|.||++++++.++++|||++...
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhc
Confidence 99999999999999999987653
No 232
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.67 E-value=2.1e-15 Score=158.47 Aligned_cols=237 Identities=18% Similarity=0.146 Sum_probs=143.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|....+|+.||||+.++.... ..+....+.+|+..++.
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 57 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-----------------------------KLKQVEHVLNEKRILQS 57 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-----------------------------hhhHHHHHHHHHHHHHh
Confidence 5799999999999999989999999997632100 00111233344444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
..| +++.-..-+.......+++|||++|++|.+.... ...-.++..++.+||+.|++|+|
T Consensus 58 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~d 126 (290)
T cd05580 58 IRH-----------PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRD 126 (290)
T ss_pred CCC-----------CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 322 3322222233445678899999999999876432 11225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
+||.||+++.+|.++++|||++........ . ...+.++++|+.-.. ...+
T Consensus 127 l~p~nili~~~~~~kl~dfg~~~~~~~~~~-~------------------~~~~~~y~aPE~~~~-----------~~~~ 176 (290)
T cd05580 127 LKPENLLLDSDGYIKITDFGFAKRVKGRTY-T------------------LCGTPEYLAPEIILS-----------KGYG 176 (290)
T ss_pred CCHHHEEECCCCCEEEeeCCCccccCCCCC-C------------------CCCCccccChhhhcC-----------CCCC
Confidence 999999999999999999999887644310 0 001233444432100 1112
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHh
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVAL 505 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~l 505 (704)
...|.|++|.++.++... ..++...... ...+.+. .....+ | ...++.++++++++
T Consensus 177 ~~~Di~slG~il~~l~~g--~~p~~~~~~~-~~~~~~~---------~~~~~~-----~-------~~~~~~l~~li~~~ 232 (290)
T cd05580 177 KAVDWWALGILIYEMLAG--YPPFFDDNPI-QIYEKIL---------EGKVRF-----P-------SFFSPDAKDLIRNL 232 (290)
T ss_pred ccccHHHHHHHHHHHHhC--CCCCCCCCHH-HHHHHHh---------cCCccC-----C-------ccCCHHHHHHHHHH
Confidence 335667777766666542 2222222111 1111110 001111 1 23478999999999
Q ss_pred hhccccCCC-----CHHHHHhhhhH
Q 005274 506 LYKEGVFRI-----DRLESLLTESL 525 (704)
Q Consensus 506 L~~d~~~R~-----~rle~Ll~~~~ 525 (704)
|..||..|+ +.-+.+-|+.+
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~~~~ 257 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNHPWF 257 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcCccc
Confidence 999999998 44455556554
No 233
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.67 E-value=2.2e-15 Score=157.10 Aligned_cols=134 Identities=17% Similarity=0.127 Sum_probs=93.5
Q ss_pred ccccccccceEEEEEEccCCc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|++|.||+|+.+.+|+ +||||+.+..... .....+.+|..
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~-------------------------------~~~~~~~~e~~ 61 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP-------------------------------KANKEILDEAY 61 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCH-------------------------------HHHHHHHHHHH
Confidence 579999999999999877777 4899987643211 11122233333
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G 340 (704)
.+.... ++++....-+. .....+++|||++++.+.+.... . ....++..++.++|+.|
T Consensus 62 ~l~~~~-----------~~~i~~~~~~~-~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 62 VMAGVG-----------SPYVCRLLGIC-LTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred HHHhcC-----------CCCCceEEEEE-cCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 332222 23332222122 23457799999999998877432 1 12267788899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++|+|+||+||+++.+++++++|||+++.+.
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999999999999999988764
No 234
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.67 E-value=7.7e-16 Score=160.85 Aligned_cols=135 Identities=17% Similarity=0.241 Sum_probs=95.9
Q ss_pred ccccccccceEEEEEEc----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|+||+||+|+.. .++..||+|..++.... +....+.+|+.
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~E~~ 59 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP-------------------------------QQWGEFQQEAS 59 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH-------------------------------HHHHHHHHHHH
Confidence 56999999999999863 35678999987642111 11123344555
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--------------------------h
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--------------------------L 324 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--------------------------l 324 (704)
.++..+| +++.-..-+.......+++|||++|++|.++.... -
T Consensus 60 ~l~~l~h-----------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T cd05090 60 LMAELHH-----------PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128 (283)
T ss_pred HHhhCCC-----------CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHH
Confidence 5444433 44332222334456789999999999998764210 1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.-.++..++.++|+.|++|+|+||.||+++.++.++++|||+++.+.
T Consensus 129 i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (283)
T cd05090 129 IAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIY 175 (283)
T ss_pred HHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccccccccc
Confidence 22467778999999999999999999999999999999999998754
No 235
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.67 E-value=2.1e-15 Score=158.18 Aligned_cols=239 Identities=16% Similarity=0.122 Sum_probs=141.3
Q ss_pred ccccccccceEEEEEEccC-----CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-----GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-----G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||+|++|.||+|..+.. +..||+|+.+.+... +....+.+|+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~-------------------------------~~~~~~~~E~ 66 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE-------------------------------KDLSDLVSEM 66 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH-------------------------------HHHHHHHHHH
Confidence 5799999999999998643 378999997753211 1112234455
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------------------h
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------------------L 324 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------------------l 324 (704)
+.+.... +++++.-..-+....+..+++|||++|++|.++.... -
T Consensus 67 ~~l~~l~----------~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 136 (293)
T cd05053 67 EMMKMIG----------KHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVS 136 (293)
T ss_pred HHHHhhc----------CCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHH
Confidence 5444431 1244332222344456789999999999998765310 1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCC
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLP 404 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~ 404 (704)
.-.++..++.+||+.|++|+|++|.||+++.+|.++++|||++..+........ .... ....++.+
T Consensus 137 i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--------~~~~------~~~~~y~a 202 (293)
T cd05053 137 FAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRK--------TTNG------RLPVKWMA 202 (293)
T ss_pred HHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceec--------cCCC------CCCccccC
Confidence 225677789999999999999999999999999999999999886543211000 0000 00123444
Q ss_pred CccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccch
Q 005274 405 PTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYP 484 (704)
Q Consensus 405 p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P 484 (704)
|+.- ....++...|.|++|.++.+++... ..++.- .....+.+.+. ++. .++ .|
T Consensus 203 PE~~-----------~~~~~~~~~Di~slG~il~el~~~g-~~p~~~-~~~~~~~~~~~--~~~----~~~-------~~ 256 (293)
T cd05053 203 PEAL-----------FDRVYTHQSDVWSFGVLLWEIFTLG-GSPYPG-IPVEELFKLLK--EGY----RME-------KP 256 (293)
T ss_pred HHHh-----------ccCCcCcccceeehhhHHHHHhcCC-CCCCCC-CCHHHHHHHHH--cCC----cCC-------CC
Confidence 4421 1122334457777777776654310 111100 01111111111 110 000 11
Q ss_pred hHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHh
Q 005274 485 YIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLL 521 (704)
Q Consensus 485 ~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll 521 (704)
...++++.+++.+++..||..|.+.-+-+.
T Consensus 257 -------~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 257 -------QNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred -------CCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 235778999999999999999998665443
No 236
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.67 E-value=5.5e-16 Score=158.43 Aligned_cols=141 Identities=20% Similarity=0.232 Sum_probs=101.5
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|++|+||+|..+.+|+.|++|+........ ...+..+.+.+|++.++
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---------------------------~~~~~~~~~~~e~~~l~ 57 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ---------------------------TGQEAVKQLEQEIALLS 57 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc---------------------------cchHHHHHHHHHHHHHH
Confidence 367999999999999998899999999876421110 01122345566777666
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
..+| ..+.+. ..+.......+++|||++|++|.++... .....++..++.+||+.|++|+
T Consensus 58 ~~~h-~~i~~~----------~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (258)
T cd06632 58 KLQH-PNIVQY----------LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126 (258)
T ss_pred hcCC-CCchhe----------eeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 6554 122211 1123334678899999999999877432 1122467778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|++|+||+++.++.++++|||++.....
T Consensus 127 dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 127 DIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred CCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999999999999999876543
No 237
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.67 E-value=8.2e-16 Score=161.54 Aligned_cols=135 Identities=22% Similarity=0.304 Sum_probs=93.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||..+..... ++....+.+|++.++.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 57 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQED------------------------------EGVPSTAIREISLLKE 57 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhcccc------------------------------ccchHHHHHHHHHHHh
Confidence 5799999999999999889999999986532100 0111233345444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+.......++||||+++ .+.+.... .....++..++.+||+.|++|
T Consensus 58 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 58 MQH-----------GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred ccC-----------CCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 332 4443333344455678999999976 55443211 112257788999999999999
Q ss_pred cCCCCCcEEEec-CCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSY-DGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~-dG~l~liDFGl~~~l~ 371 (704)
+|++|.||+++. ++.++++|||++..+.
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccC
Confidence 999999999985 5679999999987543
No 238
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.67 E-value=4.9e-16 Score=161.93 Aligned_cols=135 Identities=24% Similarity=0.338 Sum_probs=96.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+|..||||+...+... ......+..|++.+..
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 54 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETED------------------------------EGVPSTAIREISLLKE 54 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc------------------------------ccchhHHHHHHHHHHh
Confidence 4699999999999999889999999997643211 0111234456666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----hh-------HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----YL-------IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~l-------~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+.......+++|||+++ .+.++... .+ .-.++..++.+||+.|++|
T Consensus 55 l~~-----------~~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H 122 (283)
T cd07835 55 LNH-----------PNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLH 122 (283)
T ss_pred cCC-----------CCccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 554 2221111122334678899999964 66665321 11 1256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|++|+||+++.+|.++++|||++..+.
T Consensus 123 ~dl~p~nil~~~~~~~~l~df~~~~~~~ 150 (283)
T cd07835 123 RDLKPQNLLIDREGALKLADFGLARAFG 150 (283)
T ss_pred CCCCHHHEEEcCCCcEEEeecccccccC
Confidence 9999999999999999999999987654
No 239
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.67 E-value=1.2e-15 Score=161.26 Aligned_cols=240 Identities=18% Similarity=0.143 Sum_probs=146.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||+|+....... -...+.+|+..+++
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 73 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------------------------------KKELIINEILVMRE 73 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--------------------------------hHHHHHHHHHHHHh
Confidence 5699999999999999889999999987532111 01234455555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------h--hHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------Y--LIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~--l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
..| +++.-..-+.......++||||++|+.|.++... . ..-.++..++.+||..|++|+|+
T Consensus 74 ~~h-----------~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dL 142 (296)
T cd06654 74 NKN-----------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 142 (296)
T ss_pred CCC-----------CCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 433 4443333334445678999999999999887532 1 12246777899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.++.++++|||++........... ....+..+++|+.-. ....+.
T Consensus 143 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~----------------~~~~~~~y~aPE~~~-----------~~~~~~ 195 (296)
T cd06654 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----------------TMVGTPYWMAPEVVT-----------RKAYGP 195 (296)
T ss_pred CHHHEEEcCCCCEEECccccchhccccccccC----------------cccCCccccCHHHHc-----------CCCCCc
Confidence 99999999999999999999876543321100 000112223322100 011122
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++.. ...+|..+.....+. . +.....|.... ....++.+.++++++|
T Consensus 196 ~~Dv~s~Gvil~~l~~--g~~pf~~~~~~~~~~-~------~~~~~~~~~~~------------~~~~~~~l~~li~~~l 254 (296)
T cd06654 196 KVDIWSLGIMAIEMIE--GEPPYLNENPLRALY-L------IATNGTPELQN------------PEKLSAIFRDFLNRCL 254 (296)
T ss_pred cchHHHHHHHHHHHHh--CCCCCCCCCHHHhHH-H------HhcCCCCCCCC------------ccccCHHHHHHHHHHC
Confidence 3455666666655543 122222221111000 0 00000111100 1245678999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
.+||..|.+.-+-+-|+.+
T Consensus 255 ~~~p~~Rpt~~eil~~~~~ 273 (296)
T cd06654 255 DMDVEKRGSAKELLQHQFL 273 (296)
T ss_pred cCCcccCcCHHHHhhChhh
Confidence 9999999999888888765
No 240
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.67 E-value=1.5e-15 Score=156.57 Aligned_cols=137 Identities=18% Similarity=0.262 Sum_probs=98.8
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||.|++|.||+|+...+|+.||||+..+.... ..+..+.+..|+..++..+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~l~ 51 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-----------------------------ETGQQEHIFSEKEILEECN 51 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-----------------------------hhhHHHHHHHHHHHHHhCC
Confidence 68999999999999888999999998643110 0012233444444443333
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
| +++.-..-+....+..+++|||++|++|.+.... ...-.++..++.++|+.|++|+|+|
T Consensus 52 h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 52 H-----------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred C-----------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 2 3433322233455678999999999999887432 1122467788999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCccccChh
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
|.||+++.+|.++++|||.+..+...
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999999999999998876543
No 241
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.67 E-value=4.9e-16 Score=159.71 Aligned_cols=138 Identities=15% Similarity=0.212 Sum_probs=99.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+...+|+.||+|+........ ....+.+.+|+..++.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~~~~~~~e~~~l~~ 56 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-----------------------------KGSVRNVLNERRILQE 56 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-----------------------------hhHHHHHHHHHHHHHh
Confidence 57999999999999998899999999986321000 0112344555555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---------hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY---------LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~---------l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| .++...+. ..+.....+++|||++|++|.+..... ..-.++..++.+||+.|++|+|
T Consensus 57 l~h-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~d 125 (258)
T cd05578 57 LNH-PFLVNLWY----------SFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRD 125 (258)
T ss_pred CCC-CChHHHHH----------hhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 444 22222221 222345688999999999998764321 1225677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|.||+++.+|.++++|||.+.....
T Consensus 126 l~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 126 IKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCHHHeEEcCCCCEEEeecccccccCC
Confidence 999999999999999999999876544
No 242
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.67 E-value=2.3e-15 Score=159.36 Aligned_cols=252 Identities=19% Similarity=0.184 Sum_probs=154.7
Q ss_pred hCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHH
Q 005274 181 LGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDE 260 (704)
Q Consensus 181 lG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde 260 (704)
.|.+. .-|... +.||.|++|.||+|+...+|+.||||........
T Consensus 14 ~~~~~-~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-------------------------------- 58 (296)
T cd06655 14 IGDPK-KKYTRY--EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-------------------------------- 58 (296)
T ss_pred cCCCc-ceEEEE--EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--------------------------------
Confidence 34433 334444 5699999999999999889999999987421100
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--------hHHHHHHHH
Q 005274 261 WASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--------LIEVGVYCS 332 (704)
Q Consensus 261 ~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--------l~e~~v~~~ 332 (704)
....+.+|+..++..+| +++.-..-+.......++||||++|+.|.+..... ..-.++..+
T Consensus 59 ~~~~~~~e~~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~a 127 (296)
T cd06655 59 KKELIINEILVMKELKN-----------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQA 127 (296)
T ss_pred hHHHHHHHHHHHHhcCC-----------CceeeeeeeEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 01223444444444333 44443333444566789999999999998764321 122456678
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHH
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
+.+||+.|++|+|+||.||+++.+|.++++|||++..+........ ......++++|+.-.
T Consensus 128 l~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~----------------~~~~~~~y~aPE~~~--- 188 (296)
T cd06655 128 LEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS----------------TMVGTPYWMAPEVVT--- 188 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCC----------------CcCCCccccCcchhc---
Confidence 9999999999999999999999999999999999886654321100 000122344444211
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
....+...|.|++|.++.+++.. ..++........+.. +.....|... .| .
T Consensus 189 --------~~~~~~~~Dv~slGvil~~lltg--~~pf~~~~~~~~~~~-------~~~~~~~~~~-----~~-------~ 239 (296)
T cd06655 189 --------RKAYGPKVDIWSLGIMAIEMVEG--EPPYLNENPLRALYL-------IATNGTPELQ-----NP-------E 239 (296)
T ss_pred --------CCCCCchhhHHHHHHHHHHHHhC--CCCCCCCCHHHHHHH-------HHhcCCcccC-----Cc-------c
Confidence 01122334667777777666542 223322222211110 0000011110 01 2
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
..++.++++++++|..||..|.+.-+-+.|+.++
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 4678899999999999999999998888888763
No 243
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.66 E-value=9.9e-16 Score=158.04 Aligned_cols=138 Identities=16% Similarity=0.207 Sum_probs=98.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.++.... ..+....+..|+.+++.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l~~ 58 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM-----------------------------DAKARQDCVKEIDLLKQ 58 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC-----------------------------CHHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999986531100 00112234445555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qLh~~G~ 341 (704)
.+| +++.-..-+.......+++|||++|++|.++... .+ .-.++..++.+||+.|+
T Consensus 59 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 127 (267)
T cd08228 59 LNH-----------PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV 127 (267)
T ss_pred CCC-----------cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 443 3333222233345678899999999999876421 01 12467778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+|+||.||+++.+|.++++|||++..+..
T Consensus 128 ~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 128 MHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred eCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999999999999999999887654
No 244
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.66 E-value=1.9e-15 Score=158.26 Aligned_cols=135 Identities=19% Similarity=0.285 Sum_probs=95.2
Q ss_pred ccccccccceEEEEEE----ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARL----RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~l----k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|++|.||.|+. +.+|..||+|..++.... .....+.+|+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~-------------------------------~~~~~~~~e~~ 58 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG-------------------------------NHIADLKKEIE 58 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH-------------------------------HHHHHHHHHHH
Confidence 4599999999999985 347889999998754221 11223445555
Q ss_pred HHHHHhhHHHHHHHhcCCccee-eceeeeec-ccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVL-IPEMYVEQ-TTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLE 338 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~-vP~v~~e~-ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~ 338 (704)
.++...| +++. +...+... ....++||||++|++|.++... . ..-.++..++.++|+
T Consensus 59 ~l~~l~h-----------~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~ 127 (284)
T cd05079 59 ILRNLYH-----------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS 127 (284)
T ss_pred HHHhCCC-----------CCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444333 3322 22222221 2456899999999999887432 0 112567778999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.|++|+|+||.||+++.+|.++++|||++..+.
T Consensus 128 ~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 128 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred CCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 999999999999999999999999999988664
No 245
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=5.5e-16 Score=169.52 Aligned_cols=137 Identities=21% Similarity=0.242 Sum_probs=98.4
Q ss_pred ccccccccceEEEEEEcc-CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+.||+|+||+||+|+++. +|+.||||+..+..... . .+.....+.+|+..++
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~--------------------------~~~~~~~~~~E~~iL~ 76 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-S--------------------------KPLARHLAAREIRALK 76 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-c--------------------------cHHHHHHHHHHHHHHH
Confidence 579999999999999876 68888999865321100 0 0112234556666666
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hhHHHHHHHHHHHHHHCCccccCC-CCCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YLIEVGVYCSFNQLLEKGFYHADP-HPGN 350 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l~e~~v~~~L~qLh~~G~~H~Dp-hPgN 350 (704)
.++| +++ +|.++. .+..+||||||+|.+|...... .-.-.++..++.++|+.|++|||+ ||+|
T Consensus 77 ~L~h-----------~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N 142 (365)
T PRK09188 77 TVRG-----------IGV-VPQLLA--TGKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQN 142 (365)
T ss_pred hccC-----------CCC-CcEEEE--cCCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcce
Confidence 5544 232 344443 3568999999999998743211 112245678899999999999999 8999
Q ss_pred EEEecCCcEEEEecCCccccCh
Q 005274 351 LFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 351 ILv~~dG~l~liDFGl~~~l~~ 372 (704)
||++.+|+++++|||+++.+..
T Consensus 143 ILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 143 WLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEcCCCCEEEEECccceeccc
Confidence 9999999999999999998764
No 246
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.66 E-value=2.2e-15 Score=162.40 Aligned_cols=141 Identities=17% Similarity=0.212 Sum_probs=95.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+...+|+.||||..++..... +-.....+|+..+..
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~E~~~l~~ 60 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR------------------------------IDAKRTLREIKLLRH 60 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEeccccccc------------------------------chhHHHHHHHHHHHh
Confidence 58999999999999999899999999876532110 011233456665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| .++.+.++. ..+. -.+.....+++|||+.+ .|.+.... ...-.++..++.+||+.|++|+|
T Consensus 61 l~h-~ni~~~~~~----~~~~-~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~d 133 (337)
T cd07858 61 LDH-ENVIAIKDI----MPPP-HREAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRD 133 (337)
T ss_pred cCC-CCccchHHh----eecc-cccccCcEEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 544 222222110 0000 01112357899999964 56554321 12235777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+||.||+++.+|.++++|||++.....
T Consensus 134 lkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 134 LKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred CCHHHEEEcCCCCEEECcCccccccCC
Confidence 999999999999999999999876543
No 247
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.66 E-value=1.1e-15 Score=155.67 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=96.7
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||.|++|+||+|+...+|+.||+|+.+.+..... .-...+..|++.++..+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-----------------------------~~~~~~~~e~~~l~~l~ 51 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR-----------------------------KEVEHTLTERNILSRIN 51 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch-----------------------------HHHHHHHHHHHHHHHcC
Confidence 6899999999999988899999999875421100 01123445555555444
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
| ..+...+. ..+.....+++|||++|++|.+.... ...-.++..++.++|+.|++|+|++
T Consensus 52 h-~~i~~~~~----------~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 52 H-PFIVKLHY----------AFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred C-CcHHHHHH----------HeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 3 12222221 22335567899999999999876432 1122567788999999999999999
Q ss_pred CCcEEEecCCcEEEEecCCccccCh
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|.||+++.+|.++++|||++.....
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred cceEEEcCCCcEEEeecCcceeccc
Confidence 9999999999999999999876543
No 248
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.66 E-value=2.6e-16 Score=176.27 Aligned_cols=229 Identities=19% Similarity=0.192 Sum_probs=150.6
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
-+|.|||+.|.++.++.+++..+||++.....+ ..+|+
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------------------------------------~~~e~------ 366 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------------------------------------NQDEI------ 366 (612)
T ss_pred ccCCCCccceeeeeccccccchhheeccccccc------------------------------------ccccc------
Confidence 499999999999999999999999997632100 01111
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------h--hHHHHHHHHHHHHHHCCccccCCC
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------Y--LIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~--l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
.....+.+++++.--.-..+.....++|||.+.|+-+.+-... . -...++..++.+||++|++|||+|
T Consensus 367 ----~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLk 442 (612)
T KOG0603|consen 367 ----PISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLK 442 (612)
T ss_pred ----chhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCC
Confidence 1222344455554444445556778999999999877664321 1 123566678999999999999999
Q ss_pred CCcEEE-ecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 348 PGNLFR-SYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 348 PgNILv-~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
|+|||+ +.+|+|+++|||..++++... .....+++|.+|++-. ...++.
T Consensus 443 p~NIL~~~~~g~lrltyFG~a~~~~~~~-------------------~tp~~t~~y~APEvl~-----------~~~yt~ 492 (612)
T KOG0603|consen 443 PGNILLDGSAGHLRLTYFGFWSELERSC-------------------DTPALTLQYVAPEVLA-----------IQEYTE 492 (612)
T ss_pred hhheeecCCCCcEEEEEechhhhCchhh-------------------cccchhhcccChhhhc-----------cCCCCc
Confidence 999999 689999999999999887651 1112234444444221 122334
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.||+|.++.+|+..+.-+. .-|.. .|-..+...|.|+ ...|.+++++|++||
T Consensus 493 acD~WSLGvlLy~ML~G~tp~~-~~P~~----------~ei~~~i~~~~~s--------------~~vS~~AKdLl~~LL 547 (612)
T KOG0603|consen 493 ACDWWSLGVLLYEMLTGRTLFA-AHPAG----------IEIHTRIQMPKFS--------------ECVSDEAKDLLQQLL 547 (612)
T ss_pred chhhHHHHHHHHHHHhCCCccc-cCCch----------HHHHHhhcCCccc--------------cccCHHHHHHHHHhc
Confidence 4455555555555554321111 12222 1111233344444 367999999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
..||..|.+.-+.+.|+-+
T Consensus 548 ~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 548 QVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cCChhhCcChhhhccCcch
Confidence 9999999999999999865
No 249
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.66 E-value=2e-15 Score=154.92 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=96.2
Q ss_pred ccccccccceEEEEEEcc-CCc--EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-SGR--VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-tG~--~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|++|.||+|.+.. +|+ .||||+.+++... +..+.+..|+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~~~ 49 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-------------------------------DIMDDFLKEAAI 49 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-------------------------------HHHHHHHHHHHH
Confidence 368999999999999865 333 6999998764321 222344455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----h-------HHHHHHHHHHHHHHCC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----L-------IEVGVYCSFNQLLEKG 340 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----l-------~e~~v~~~L~qLh~~G 340 (704)
+...+| +++....-+... ...+++|||++|++|.+..... + .-.++..++.++|+.|
T Consensus 50 l~~l~h-----------~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 117 (257)
T cd05040 50 MHSLDH-----------ENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR 117 (257)
T ss_pred HhhcCC-----------CCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 554443 332222222222 6778999999999998764221 1 1246777899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||+||+++.++.++++|||++..+..
T Consensus 118 i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 118 FIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred ccccccCcccEEEecCCEEEeccccccccccc
Confidence 99999999999999999999999999887643
No 250
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.66 E-value=7.5e-16 Score=165.68 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=94.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+....... .+....+.+|+..++.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 60 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV------------------------------PTLAKRTLRELKILRH 60 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEecccccc------------------------------ccchHHHHHHHHHHHh
Confidence 5799999999999999999999999987643111 0112334456666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeee---ecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV---EQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~---e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+|. ++.. +..++. ......+++|||+.| .+.+.... ...-.++..++.+||+.|++
T Consensus 61 l~h~-~iv~---------~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 129 (334)
T cd07855 61 FKHD-NIIA---------IRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVI 129 (334)
T ss_pred cCCC-CccC---------HHHhccccCCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5541 1111 111111 123457899999965 56555321 11225777889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|+||.||+++.+|.++++|||++..+.
T Consensus 130 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 130 HRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred cCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999999999999999999999987654
No 251
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.66 E-value=2.2e-15 Score=155.09 Aligned_cols=132 Identities=17% Similarity=0.195 Sum_probs=96.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+ ++..+|||+..++... ...+.+|++.++.
T Consensus 10 ~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---------------------------------~~~~~~e~~~l~~ 55 (256)
T cd05059 10 KELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---------------------------------EDDFIEEAKVMMK 55 (256)
T ss_pred hhhccCCCceEEEeEec-CCccEEEEEeccCCCC---------------------------------HHHHHHHHHHHHh
Confidence 56999999999999986 6778999997643211 0123345444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+....+..+++|||++|+.|.+.... . -.-.++..++.++|+.|++|+
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 56 LSH-----------PNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred CCC-----------CCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 332 4443333334455678899999999999886432 0 112566778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.+|.++++|||++....
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~~~~ 151 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLARYVL 151 (256)
T ss_pred cccHhhEEECCCCcEEECCcccceecc
Confidence 999999999999999999999987654
No 252
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.66 E-value=2e-15 Score=156.73 Aligned_cols=240 Identities=20% Similarity=0.184 Sum_probs=147.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||+|+....... +....+.+|++.+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE-------------------------------DEIEDIQQEIQFLSQ 55 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc-------------------------------hHHHHHHHHHHHHHH
Confidence 4699999999999999989999999987522100 011233455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| +++.-+..+.......++||||++|+.|.+.... ...-.++..++.++|+.|++|+|+
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl 124 (274)
T cd06609 56 CRS-----------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDI 124 (274)
T ss_pred cCC-----------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 443 4444333344445678999999999999877542 112256777889999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.+|.++++|||+++.+....... . ....+.++++|+.-.. ...+.
T Consensus 125 ~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~------------~----~~~~~~~y~~PE~~~~-----------~~~~~ 177 (274)
T cd06609 125 KAANILLSEEGDVKLADFGVSGQLTSTMSKR------------N----TFVGTPFWMAPEVIKQ-----------SGYDE 177 (274)
T ss_pred CHHHEEECCCCCEEEcccccceeeccccccc------------c----cccCCccccChhhhcc-----------CCCCc
Confidence 9999999999999999999998775432100 0 0001123333332110 01122
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-+.... . ..-+.....|.... ...++.+++++.++|
T Consensus 178 ~sDv~slG~il~~l~tg--~~p~~~~~~~~-~------~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~l 235 (274)
T cd06609 178 KADIWSLGITAIELAKG--EPPLSDLHPMR-V------LFLIPKNNPPSLEG-------------NKFSKPFKDFVSLCL 235 (274)
T ss_pred hhhHHHHHHHHHHHHhC--CCCcccCchHH-H------HHHhhhcCCCCCcc-------------cccCHHHHHHHHHHh
Confidence 33555666655555431 11221111000 0 00001111111100 015778999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
..||..|++.-+.+.|+.+
T Consensus 236 ~~~p~~Rpt~~~il~~~~~ 254 (274)
T cd06609 236 NKDPKERPSAKELLKHKFI 254 (274)
T ss_pred hCChhhCcCHHHHhhChhh
Confidence 9999999998888888876
No 253
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.66 E-value=2.8e-15 Score=157.30 Aligned_cols=135 Identities=21% Similarity=0.379 Sum_probs=96.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.++.+++.||+|+....... .....+.+|++.+..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-------------------------------DLQKQILRELEINKS 55 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch-------------------------------HHHHHHHHHHHHHHh
Confidence 6799999999999999889999999987643111 112334445544443
Q ss_pred HhhHHHHHHHhcCCcceee-ceeeee-cccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHHHHHHHC
Q 005274 275 AKNGLKFRQLYGGIQDVLI-PEMYVE-QTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~v-P~v~~e-~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L~qLh~~ 339 (704)
.+| +++.- ...+.. ..+..++||||++|++|.++... ...-.++..++.++|+.
T Consensus 56 l~h-----------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 124 (287)
T cd06621 56 CKS-----------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR 124 (287)
T ss_pred CCC-----------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 333 44322 122222 23457899999999999876321 01225677789999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|++|+|++|+||+++.++.++++|||++..+.
T Consensus 125 ~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 125 KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999999999999999999999987654
No 254
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.66 E-value=1.4e-15 Score=158.25 Aligned_cols=243 Identities=19% Similarity=0.196 Sum_probs=144.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||.||+|+.+.+|+.||||+.++..... ....+..|++..
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~~~~~~~e~~~~-- 53 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-------------------------------EQKRLLMDLDIS-- 53 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-------------------------------HHHHHHHHHHHH--
Confidence 56999999999999999899999999987542210 011122222211
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHHHHHHHC-C
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSFNQLLEK-G 340 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L~qLh~~-G 340 (704)
.+. .+++++.-..-+....+..+++|||++| .|.++... ...-.++..++.+||+. |
T Consensus 54 -------~~~-~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~ 124 (283)
T cd06617 54 -------MRS-VDCPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS 124 (283)
T ss_pred -------HHH-cCCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 111 2334443222233445678999999986 45443211 01225677889999997 9
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHH
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVF 420 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~ 420 (704)
++|+|+||+||+++.++.++++|||++..+....... ....+..+++|+.-... ..
T Consensus 125 i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------------~~~~~~~y~aPE~~~~~-------~~ 180 (283)
T cd06617 125 VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKT-----------------IDAGCKPYMAPERINPE-------LN 180 (283)
T ss_pred eecCCCCHHHEEECCCCCEEEeecccccccccccccc-----------------cccCCccccChhhcCCc-------cc
Confidence 9999999999999999999999999987654321100 00112234444321100 00
Q ss_pred HHHhhccCCccCHHhHHHHHHHHHhhcCCCC-ChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 421 QNAVAKGVRNISFGDLLGNLGATMYKFKFRI-PSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 421 ~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~i-P~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
...++...|.|++|.++.++... .+++.- ...+..+... ..+ ..|.+. ....+++++
T Consensus 181 ~~~~~~~~Di~slG~~l~~l~~g--~~p~~~~~~~~~~~~~~---~~~----~~~~~~-------------~~~~~~~l~ 238 (283)
T cd06617 181 QKGYDVKSDVWSLGITMIELATG--RFPYDSWKTPFQQLKQV---VEE----PSPQLP-------------AEKFSPEFQ 238 (283)
T ss_pred ccccCccccchhhHHHHHHHHhC--CCCCCccccCHHHHHHH---Hhc----CCCCCC-------------ccccCHHHH
Confidence 01122345778888887776642 233321 1112111111 111 111110 012578899
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++++++|.++|..|++.-+-+.|+.+
T Consensus 239 ~li~~~l~~~p~~Rp~~~~il~~~~~ 264 (283)
T cd06617 239 DFVNKCLKKNYKERPNYPELLQHPFF 264 (283)
T ss_pred HHHHHHccCChhhCcCHHHHhcCchh
Confidence 99999999999999999887778766
No 255
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.66 E-value=2.7e-15 Score=155.98 Aligned_cols=260 Identities=20% Similarity=0.186 Sum_probs=143.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+.+..... +.....+..|++.++.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 54 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE------------------------------EGIPLSTLREIALLKQ 54 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEecccccc------------------------------chhhhhHHHHHHHHHH
Confidence 4689999999999999878999999998743211 0111223345444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc-----cceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT-----TRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s-----s~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~ 338 (704)
.++. .++++.-..-+.... ...+++|||+++ .+.+.... ...-.++..++.+||+
T Consensus 55 l~~~--------~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 55 LESF--------EHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred hhcc--------CCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3210 112222111111112 237899999976 56554221 1122567778999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG 418 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~ 418 (704)
.|++|+|++|+||+++.+++++++|||.+..+....... .......+++|+.-.
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~-----------------~~~~~~~~~~PE~~~--------- 179 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALT-----------------SVVVTLWYRAPEVLL--------- 179 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccc-----------------cccccccccChHHhc---------
Confidence 999999999999999999999999999987754321100 000123344443210
Q ss_pred HHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhh---hhhhhhcCCC--CccccccchhHHhhhccC
Q 005274 419 VFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVL---EGIAISSNPN--YKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 419 v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~l---EGi~~~ldP~--~~i~~~a~P~i~r~ll~d 493 (704)
....+...|.|++|.++.++... ..++........+.+.+... .......... ...+....+-.......+
T Consensus 180 --~~~~~~~~Di~s~G~~l~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (287)
T cd07838 180 --QSSYATPVDMWSVGCIFAELFRR--RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPE 255 (287)
T ss_pred --cCCCCCcchhhhHHHHHHHHHhC--CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhh
Confidence 11123344666677666665532 22222211111111111100 0000000000 000000011112344456
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhh
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
.++.+.++++++|..||..|++.-+.|.|+
T Consensus 256 ~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 256 ICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred hhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 688999999999999999999988888775
No 256
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.66 E-value=5.1e-15 Score=153.79 Aligned_cols=244 Identities=19% Similarity=0.197 Sum_probs=147.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+...+|+.||||+.+.+... .....+.+|+..++.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-------------------------------DDVSDIQREVALLSQ 55 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-------------------------------hhHHHHHHHHHHHHH
Confidence 5799999999999999889999999997643211 011223344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-h-------hHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-Y-------LIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~-------l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.++ ..++++.-..-+....+..+++|||++|++|.++... . ..-.++..++.+||+.|++|+|+
T Consensus 56 l~~--------~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl 127 (277)
T cd06917 56 LRQ--------SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDI 127 (277)
T ss_pred hcc--------CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 331 1235544333344556678999999999999877532 1 12246777899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.+|.++++|||.+..+......... ...+..+++|+.-.. ...++.
T Consensus 128 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~----------------~~~~~~y~aPE~~~~----------~~~~~~ 181 (277)
T cd06917 128 KAANILVTNTGNVKLCDFGVAALLNQNSSKRST----------------FVGTPYWMAPEVITE----------GKYYDT 181 (277)
T ss_pred CHHHEEEcCCCCEEEccCCceeecCCCcccccc----------------ccCCcceeCHHHhcc----------CCcccc
Confidence 999999999999999999998776543211000 000112223221100 001122
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..++.-..... .. ..+.....|.+. ....++++.++++++|
T Consensus 182 ~~Dv~slG~~l~~ll~g--~~p~~~~~~~~----~~---~~~~~~~~~~~~-------------~~~~~~~~~~~i~~~l 239 (277)
T cd06917 182 KADIWSLGITIYEMATG--NPPYSDVDAFR----AM---MLIPKSKPPRLE-------------DNGYSKLLREFVAACL 239 (277)
T ss_pred chhHHHHHHHHHHHHhC--CCCCCCCChhh----hh---hccccCCCCCCC-------------cccCCHHHHHHHHHHc
Confidence 34556666666555431 12221111110 00 000000111110 0125778999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
..||..|.+..+.+-|..+
T Consensus 240 ~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 240 DEEPKERLSAEELLKSKWI 258 (277)
T ss_pred CCCcccCcCHHHHhhChHh
Confidence 9999999999998888765
No 257
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.66 E-value=1.2e-15 Score=161.37 Aligned_cols=137 Identities=18% Similarity=0.250 Sum_probs=94.4
Q ss_pred ccccccccceEEEEEEcc--CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ--SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~--tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||+|++|.||+|+.+. +|+.||||+..+.... .+.+.....+|+..+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-----------------------------~~~~~~~~~~e~~~l 56 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-----------------------------YTGISQSACREIALL 56 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-----------------------------ccCccHHHHHHHHHH
Confidence 459999999999999987 7999999998764210 011123344566555
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhh--------------hhHHHHHHHHHHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDL--------------YLIEVGVYCSFNQL 336 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~--------------~l~e~~v~~~L~qL 336 (704)
...+| +++.-..-+.... ...++||||+++. +.+.... ...-.++..++.+|
T Consensus 57 ~~l~h-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 124 (316)
T cd07842 57 RELKH-----------ENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL 124 (316)
T ss_pred HhcCC-----------CCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH
Confidence 55544 2222111122223 5678999999764 4333210 11225677889999
Q ss_pred HHCCccccCCCCCcEEEec----CCcEEEEecCCccccCh
Q 005274 337 LEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~----dG~l~liDFGl~~~l~~ 372 (704)
|+.|++|+|++|.||+++. +|.++++|||++..+..
T Consensus 125 H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 125 HSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 9999999999999999999 99999999999886543
No 258
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.66 E-value=6.3e-15 Score=150.03 Aligned_cols=138 Identities=21% Similarity=0.322 Sum_probs=101.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+.+.+|+.|+||........ +.....+.+|++.+..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK------------------------------EEALKSIMQEIDLLKN 55 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC------------------------------HHHHHHHHHHHHHHHh
Confidence 6899999999999999889999999998753211 1122344555555544
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-..-+.......+++|||++|.+|.+.... ...-.++..++.++|+.|++|+|
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d 124 (254)
T cd06627 56 LKH-----------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRD 124 (254)
T ss_pred CCC-----------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 433 3333222233445678899999999999876432 11225677789999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
++|+||+++.+|.++++|||++......
T Consensus 125 l~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 125 IKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred CCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999999999999999999877653
No 259
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.66 E-value=6.1e-16 Score=164.30 Aligned_cols=271 Identities=17% Similarity=0.187 Sum_probs=159.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.-+|+|.||+|-.+.+++++..|||||++. ++...+.-.-|++.++.
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------------------------------V~kYreAa~iEi~vLqk 141 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKN---------------------------------VDKYREAALIEIEVLQK 141 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHH---------------------------------HHHHhhHHHHHHHHHHH
Confidence 359999999999999999999999999761 12233333445554444
Q ss_pred HhhHHHHHHHh-cCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLY-GGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~-~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
..+ .- .+.-.++.-.-+.+|.+..++|+|.+ |.++.++... +-...+++.++..||+.+++
T Consensus 142 i~~------~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~ 214 (415)
T KOG0671|consen 142 INE------SDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLT 214 (415)
T ss_pred HHh------cCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhccee
Confidence 322 11 11122444455788999999999988 7777776431 23446888889999999999
Q ss_pred ccCCCCCcEEEec--------------------CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC
Q 005274 343 HADPHPGNLFRSY--------------------DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 343 H~DphPgNILv~~--------------------dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~ 402 (704)
|-|+||+|||+.. +..|+++|||.++.-.+.. ..++....|...+.+..+|+
T Consensus 215 HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRAPEViLgLGw 286 (415)
T KOG0671|consen 215 HTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRAPEVILGLGW 286 (415)
T ss_pred ecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeeccccCCchheeccCc
Confidence 9999999999632 1348999999998765543 11233333333444444444
Q ss_pred CCCccchHHHHHHHHHHHHH-HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcC-CCCcc--
Q 005274 403 LPPTAEKEAVTKALTGVFQN-AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSN-PNYKV-- 478 (704)
Q Consensus 403 l~p~~d~~~i~~~L~~v~~~-~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ld-P~~~i-- 478 (704)
-.|. |.|.+++.|-+++.+ .+.++-+ |.. .| .+|...--.+|..+..-.++.-.... + .+| |+-..
T Consensus 287 S~pC-DvWSiGCIL~ElytG~~LFqtHe--n~E----HL-aMMerIlGp~P~~mi~r~~~~Kyf~~-~-rldw~e~~~~~ 356 (415)
T KOG0671|consen 287 SQPC-DVWSIGCILVELYTGETLFQTHE--NLE----HL-AMMERILGPIPSRMIKKTRKEKYFRR-G-RLDWPEVSSKG 356 (415)
T ss_pred CCcc-CceeeeeEEEEeeccceecccCC--cHH----HH-HHHHHhhCCCcHHHhhhhhhHhhhhc-c-cccCccccccc
Confidence 2221 222222222222111 1111111 211 11 34444444666666443332222111 1 333 33222
Q ss_pred -----ccccchhHHhhhccCCCh---HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 479 -----LGSTYPYIARKVLTDSSP---QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 479 -----~~~a~P~i~r~ll~d~sp---~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+...+| .++.....++ ++-|+|++||.+||..|++.-|+|.|+.|
T Consensus 357 ~~k~v~~~ckp--l~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF 409 (415)
T KOG0671|consen 357 KSKYVFEPCKP--LKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFF 409 (415)
T ss_pred cchhhhcCCcc--HHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHh
Confidence 223344 2333333333 48899999999999999999999999987
No 260
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.66 E-value=1.9e-15 Score=157.41 Aligned_cols=134 Identities=19% Similarity=0.295 Sum_probs=97.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+|+.||+|+.+..... ..+.+..|+..++.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 58 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEE--------------------------------ELEDFMVEIDILSE 58 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHH--------------------------------HHHHHHHHHHHHHh
Confidence 4599999999999999888999999998643211 01223344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......++||||++|+.|.++... ...-.++..++.++|+.|++|+
T Consensus 59 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~ 127 (280)
T cd06611 59 CKH-----------PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127 (280)
T ss_pred CCC-----------CceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 332 3433333334445678999999999999877432 1122567778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|++|.||+++.+|+++++|||++....
T Consensus 128 dl~p~nili~~~~~~~l~d~g~~~~~~ 154 (280)
T cd06611 128 DLKAGNILLTLDGDVKLADFGVSAKNK 154 (280)
T ss_pred CCChhhEEECCCCCEEEccCccchhhc
Confidence 999999999999999999999876543
No 261
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.66 E-value=2.6e-15 Score=158.24 Aligned_cols=135 Identities=17% Similarity=0.242 Sum_probs=95.4
Q ss_pred ccccccccceEEEEEEcc----------------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ----------------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVV 258 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~----------------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~iv 258 (704)
+.||+|+||.||+|..+. ++..||||+.+.....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~------------------------------ 60 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK------------------------------ 60 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCH------------------------------
Confidence 579999999999986532 3457999998754211
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------------
Q 005274 259 DEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------------- 322 (704)
Q Consensus 259 de~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------------- 322 (704)
.....+.+|+..+++.+| +++.-..-+.......+++|||++|++|.++...
T Consensus 61 -~~~~~~~~E~~~l~~l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 128 (296)
T cd05095 61 -NARNDFLKEIKIMSRLKD-----------PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128 (296)
T ss_pred -HHHHHHHHHHHHHHhCCC-----------CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccC
Confidence 112234455555444433 3333222233445668999999999999876432
Q ss_pred ----hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 323 ----YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 323 ----~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.....++..++.++|+.|++|+|+||.||+++.++.++++|||++..+.
T Consensus 129 ~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 181 (296)
T cd05095 129 YSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY 181 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCccccccc
Confidence 1122567788999999999999999999999999999999999987653
No 262
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.66 E-value=2.1e-15 Score=155.63 Aligned_cols=136 Identities=16% Similarity=0.199 Sum_probs=92.9
Q ss_pred ccccccccceEEEEEEccC---CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS---GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t---G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|+||.||+|++..+ +..||||+.+...... .-...+..|+..
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~e~~~ 54 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY------------------------------SEIEEFLSEAAC 54 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH------------------------------HHHHHHHHHHHH
Confidence 5799999999999998653 4789999876432110 001223445444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeec------ccceeEEEEeccCCChhhHHhh---------------hhHHHHHH
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQ------TTRKVLIMEWVEGQKLSEVKDL---------------YLIEVGVY 330 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~------ss~~vLVmE~i~G~~L~d~~~~---------------~l~e~~v~ 330 (704)
+++..| +++.-...+... ....+++|||+++++|...... ...-.++.
T Consensus 55 l~~l~h-----------~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 123 (273)
T cd05035 55 MKDFDH-----------PNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIA 123 (273)
T ss_pred HHhCCC-----------CCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHH
Confidence 444433 333221111111 1236899999999998766421 11225677
Q ss_pred HHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++.++|+.|++|+|+||+||+++.++.++++|||+++.+.
T Consensus 124 ~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 164 (273)
T cd05035 124 LGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIY 164 (273)
T ss_pred HHHHHHHhCCeeccccchheEEECCCCeEEECCccceeecc
Confidence 78999999999999999999999999999999999988654
No 263
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.66 E-value=8.4e-16 Score=184.02 Aligned_cols=241 Identities=17% Similarity=0.180 Sum_probs=150.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||.||+|+.+.+++.||+|++...... +.....+..|+.++..
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~------------------------------e~~~~~~~~EI~IL~~ 68 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK------------------------------EREKSQLVIEVNVMRE 68 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccC------------------------------HHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999998632110 1122345567766666
Q ss_pred HhhHHHHHHHhcCCccee-eceeee-ecccceeEEEEeccCCChhhHHhh------h-------hHHHHHHHHHHHHHHC
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYV-EQTTRKVLIMEWVEGQKLSEVKDL------Y-------LIEVGVYCSFNQLLEK 339 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~-e~ss~~vLVmE~i~G~~L~d~~~~------~-------l~e~~v~~~L~qLh~~ 339 (704)
++| ++|+ +...+. ......+|||||++|++|.++... . .+-.++..+|.+||..
T Consensus 69 L~H-----------PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 69 LKH-----------KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred cCC-----------CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 554 3322 222222 223457899999999999876432 1 1225677889999984
Q ss_pred -------CccccCCCCCcEEEecC-----------------CcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHH
Q 005274 340 -------GFYHADPHPGNLFRSYD-----------------GKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAK 395 (704)
Q Consensus 340 -------G~~H~DphPgNILv~~d-----------------G~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~ 395 (704)
+|+|+|+||.|||++.+ +.++|+|||++..+....... .
T Consensus 138 g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~-----------------s 200 (1021)
T PTZ00266 138 KDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH-----------------S 200 (1021)
T ss_pred ccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccccc-----------------c
Confidence 49999999999999642 348999999987654321100 0
Q ss_pred HHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCC
Q 005274 396 DFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPN 475 (704)
Q Consensus 396 d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~ 475 (704)
...+..|++|+..... ...++...|.|++|+++.+|+. -..||.-...+..++..+. -.|.
T Consensus 201 ~vGTp~YmAPEvL~ge---------~~~~s~KSDVWSLG~ILYELLT--Gk~PF~~~~~~~qli~~lk--------~~p~ 261 (1021)
T PTZ00266 201 CVGTPYYWSPELLLHE---------TKSYDDKSDMWALGCIIYELCS--GKTPFHKANNFSQLISELK--------RGPD 261 (1021)
T ss_pred cCCCccccCHHHHhcc---------CCCCCchhHHHHHHHHHHHHHH--CCCCCCcCCcHHHHHHHHh--------cCCC
Confidence 1123344444421100 0112334567777777766654 2234433333332222211 0121
Q ss_pred CccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 476 YKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 476 ~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+. ....++++.+++..||..+|..|++..+.|-|+.+
T Consensus 262 lp-------------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 262 LP-------------IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred CC-------------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 11 12457899999999999999999999999888765
No 264
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.66 E-value=1.7e-15 Score=156.54 Aligned_cols=137 Identities=19% Similarity=0.313 Sum_probs=96.5
Q ss_pred CccccccccceEEEEEEccCCc---EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGR---VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~---~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
.+.||+|++|+||+|+++.+|. .||||+.+++... .....+..|+.
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~e~~ 58 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE-------------------------------KQRQDFLSEAS 58 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH-------------------------------HHHHHHHHHHH
Confidence 3679999999999999976665 7999998754211 01122233333
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G 340 (704)
.+...+| +++.-..-+.......+++|||++|++|.+.... ...-.++..++.++|+.|
T Consensus 59 ~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 127 (268)
T cd05063 59 IMGQFSH-----------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127 (268)
T ss_pred HHhcCCC-----------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3333222 3333233333445667899999999999877432 111256778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||.||+++.++.++++|||++.....
T Consensus 128 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999999999999999999876643
No 265
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.66 E-value=3.4e-15 Score=157.61 Aligned_cols=134 Identities=17% Similarity=0.178 Sum_probs=92.3
Q ss_pred ccccccccceEEEEEEccCCc--EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR--VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~--~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||.|++|+||+|+++.+|. .|++|+.+..... ...+.+.+|+..+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~E~~~l 56 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE-------------------------------NDHRDFAGELEVL 56 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCH-------------------------------HHHHHHHHHHHHH
Confidence 579999999999999987775 4688876522111 1112334444444
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------------------hhHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------------------YLIEV 327 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------------------~l~e~ 327 (704)
....+ ++++.-..-+....+..+++|||+++++|.++... ...-.
T Consensus 57 ~~l~~----------hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 126 (297)
T cd05089 57 CKLGH----------HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFAS 126 (297)
T ss_pred HhhcC----------CCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHH
Confidence 33321 23322111233345568899999999999876421 01124
Q ss_pred HHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 328 GVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 328 ~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
++..++.+||+.|++|+|+||.||+++.++.++++|||++..
T Consensus 127 qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 168 (297)
T cd05089 127 DVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRG 168 (297)
T ss_pred HHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence 667789999999999999999999999999999999999864
No 266
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.66 E-value=8.3e-16 Score=162.63 Aligned_cols=141 Identities=20% Similarity=0.250 Sum_probs=102.2
Q ss_pred hhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHH
Q 005274 187 ELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLF 266 (704)
Q Consensus 187 eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~ 266 (704)
.-|... +.||+|++|.||+|+.+.+|+.||||........ ....+.
T Consensus 19 ~~y~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--------------------------------~~~~~~ 64 (297)
T cd06656 19 KKYTRF--EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--------------------------------KKELII 64 (297)
T ss_pred hhceee--eeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--------------------------------hHHHHH
Confidence 344444 5699999999999999889999999987532110 012233
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHH
Q 005274 267 RELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 267 ~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~ 338 (704)
+|+..++..+| +++.-..-+.......++||||++|++|.++... ...-.++..++.+||+
T Consensus 65 ~e~~~l~~~~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~ 133 (297)
T cd06656 65 NEILVMRENKN-----------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHS 133 (297)
T ss_pred HHHHHHHhCCC-----------CCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44444443332 4444433345556778999999999999887432 1122466778999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.|++|+|+||+||+++.+|.++++|||++.....
T Consensus 134 ~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 134 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred CCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 9999999999999999999999999999876544
No 267
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.65 E-value=7.8e-16 Score=172.03 Aligned_cols=218 Identities=18% Similarity=0.211 Sum_probs=157.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
-.+|+|.+|.||.|+++.|....|||-+.-. -+++.+-+.+|+.+...
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek--------------------------------dsr~~QPLhEEIaLH~~ 628 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK--------------------------------DSREVQPLHEEIALHST 628 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccc--------------------------------cchhhccHHHHHHHHHH
Confidence 4899999999999999999999999976421 12445677899999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------------~l~e~~v~~~L~qLh~~G~~ 342 (704)
++| .++.++++.... .+..-+.||-++|++|+++.+. .+...++..+|+|||+..|+
T Consensus 629 LrH-kNIVrYLGs~se----------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IV 697 (1226)
T KOG4279|consen 629 LRH-KNIVRYLGSVSE----------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIV 697 (1226)
T ss_pred Hhh-HhHHHHhhccCC----------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhccee
Confidence 988 566666664322 3445689999999999998542 35568999999999999999
Q ss_pred ccCCCCCcEEEe-cCCcEEEEecCCccccC------hhHHHHHHHHHHHhhccC--hhHHHHHHHhcCCCCCccchHHHH
Q 005274 343 HADPHPGNLFRS-YDGKLAYIDFGMMGEFK------EELREGFIEACLHLVNRD--FDALAKDFVTLGLLPPTAEKEAVT 413 (704)
Q Consensus 343 H~DphPgNILv~-~dG~l~liDFGl~~~l~------~~~r~~~~~~~~~l~~~d--~~~la~d~~slG~l~p~~d~~~i~ 413 (704)
|||+|-.|+|++ ..|-+||.|||.++++. +.+..++..+.+.++.+. .|+.+.|+|++||.--+..
T Consensus 698 HRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMA----- 772 (1226)
T KOG4279|consen 698 HRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMA----- 772 (1226)
T ss_pred eccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeec-----
Confidence 999999999995 68999999999998763 233334445667777654 4677999999999632211
Q ss_pred HHHHHHHHHHhhccCCccCHHhHHHHHH-HHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCC
Q 005274 414 KALTGVFQNAVAKGVRNISFGDLLGNLG-ATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNY 476 (704)
Q Consensus 414 ~~L~~v~~~~~~~~~~~~s~~~i~~~L~-~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~ 476 (704)
.+.+ .-+.+|.--..++ ..||+-+-.+|.+++--.|+++ .++..|+.
T Consensus 773 ----------TGrP-PF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fi-----lrcFepd~ 820 (1226)
T KOG4279|consen 773 ----------TGRP-PFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFI-----LRCFEPDP 820 (1226)
T ss_pred ----------cCCC-CeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHH-----HHHcCCCc
Confidence 1111 1112222223333 3478888899999987777765 45555553
No 268
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.65 E-value=3.1e-15 Score=154.12 Aligned_cols=131 Identities=15% Similarity=0.229 Sum_probs=95.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|... ++..||+|..+++... ...+.+|+++++.
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---------------------------------~~~~~~E~~~l~~ 57 (260)
T cd05070 12 KKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---------------------------------PESFLEEAQIMKK 57 (260)
T ss_pred heeccccCceEEEEEec-CCceeEEEEecCCCCC---------------------------------HHHHHHHHHHHHh
Confidence 46999999999999886 7888999998764211 0123455555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+. .....+++|||++|++|.+.... ...-.++..++.+||+.|++|
T Consensus 58 l~~-----------~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 125 (260)
T cd05070 58 LRH-----------DKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIH 125 (260)
T ss_pred cCC-----------CceEEEEeEE-CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 443 3322222222 24567899999999999876421 112256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|++|+||+++.++.++++|||.+..+.
T Consensus 126 ~di~p~Nili~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05070 126 RDLRSANILVGDGLVCKIADFGLARLIE 153 (260)
T ss_pred CCCccceEEEeCCceEEeCCceeeeecc
Confidence 9999999999999999999999987654
No 269
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.65 E-value=1.8e-15 Score=156.15 Aligned_cols=137 Identities=18% Similarity=0.237 Sum_probs=95.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|+.||||.....-.. + ......+.+|+..++.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~-------------------------~~~~~~~~~e~~~l~~ 58 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----D-------------------------AKARADCIKEIDLLKQ 58 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----h-------------------------HHHHHHHHHHHHHHHH
Confidence 5799999999999999889999999976521000 0 0111233445555444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qLh~~G~ 341 (704)
..| +++.-...+.......+++|||++|++|.++... .+ .-.++..++.+||+.|+
T Consensus 59 ~~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 127 (267)
T cd08229 59 LNH-----------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV 127 (267)
T ss_pred ccC-----------CchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 433 2222111222234567899999999999876431 11 12466778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+|++|.||+++.+|.++++|||++..+.
T Consensus 128 ~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 128 MHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 999999999999999999999999887654
No 270
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.65 E-value=2.8e-15 Score=153.72 Aligned_cols=238 Identities=15% Similarity=0.185 Sum_probs=146.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|+|++|.||+++.+.+|+.||||........ ..-...+.+|+..++.
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS------------------------------PKEREESRKEVAVLSN 55 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC------------------------------hHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999986521000 0111234455555444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----hh-------HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----YL-------IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~l-------~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+.+..+..++||||++|++|.+.... .+ .-.++..++.++|+.|++|
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h 124 (256)
T cd08218 56 MKH-----------PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILH 124 (256)
T ss_pred CCC-----------CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 433 3433333334456678999999999998776421 01 1246777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|++|.||+++.++.++++|||++..+....... .......++++|+.-. ...
T Consensus 125 ~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~----------------~~~~~~~~~~~pe~~~-----------~~~ 177 (256)
T cd08218 125 RDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA----------------RTCIGTPYYLSPEICE-----------NRP 177 (256)
T ss_pred CCCCHHHEEEcCCCCEEEeeccceeecCcchhhh----------------hhccCCccccCHHHhC-----------CCC
Confidence 9999999999999999999999987664432110 0011223344444210 111
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
.+...|.|++|.++.++.... .++.. .....+.... .....|. .-...++++++++.
T Consensus 178 ~~~~~Dv~slG~i~~~l~~g~--~~~~~-~~~~~~~~~~------~~~~~~~--------------~~~~~~~~~~~li~ 234 (256)
T cd08218 178 YNNKSDIWALGCVLYEMCTLK--HAFEA-GNMKNLVLKI------IRGSYPP--------------VSSHYSYDLRNLVS 234 (256)
T ss_pred CCCccchhHHHHHHHHHHcCC--CCccC-CCHHHHHHHH------hcCCCCC--------------CcccCCHHHHHHHH
Confidence 223356677777776665421 11111 1111111110 0111110 11245788999999
Q ss_pred HhhhccccCCCCHHHHHhhh
Q 005274 504 ALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~ 523 (704)
+++.++|..|++..+.|.|+
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~~ 254 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEKN 254 (256)
T ss_pred HHhhCChhhCcCHHHHhhCc
Confidence 99999999999998888775
No 271
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.65 E-value=1e-15 Score=161.01 Aligned_cols=136 Identities=19% Similarity=0.328 Sum_probs=93.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|+.+.+|+.||||+.+..... +.....+.+|+..++.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~------------------------------~~~~~~~~~e~~~~~~ 62 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK------------------------------EGFPITAIREIKILRQ 62 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccc------------------------------cCchHHHHHHHHHHHh
Confidence 5799999999999999989999999998643211 0111223345444444
Q ss_pred HhhHHHHHHHhcCCcceeeceee----------eecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMY----------VEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFN 334 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~----------~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~ 334 (704)
.+| +++.....+ .+..+..+++|||++| .+.+.... ...-.++..++.
T Consensus 63 l~h-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 130 (302)
T cd07864 63 LNH-----------RNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLN 130 (302)
T ss_pred CCC-----------CCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 433 232221111 1122367899999987 34332211 112256778899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+||+.|++|+|+||+||+++.++.++++|||.+..+..
T Consensus 131 ~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 131 YCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNS 168 (302)
T ss_pred HHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccC
Confidence 99999999999999999999999999999999886643
No 272
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.65 E-value=3.7e-15 Score=154.06 Aligned_cols=133 Identities=19% Similarity=0.189 Sum_probs=94.3
Q ss_pred cccccccceEEEEEEc--cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLR--QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk--~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.||.|+||.||+|+++ .+|..||||+..+.... ...+.+.+|+..++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~-------------------------------~~~~~~~~E~~~l~ 50 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEK-------------------------------SVRDEMMREAEIMH 50 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccCh-------------------------------HHHHHHHHHHHHHH
Confidence 3899999999999875 35667999998754211 12233445555555
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H 343 (704)
..+| +++.-..-+.+ ....++||||++|++|.++... . ..-.++..++.++|+.|++|
T Consensus 51 ~l~h-----------~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 118 (257)
T cd05115 51 QLDN-----------PYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH 118 (257)
T ss_pred hcCC-----------CCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 4443 33222111222 3467899999999999886531 1 11256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+||+||+++.++.++++|||++..+.
T Consensus 119 ~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 119 RDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred cccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999999999999999999987554
No 273
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.65 E-value=3.4e-15 Score=157.97 Aligned_cols=137 Identities=18% Similarity=0.196 Sum_probs=96.9
Q ss_pred ccccccccceEEEEEEc-------cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-------QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-------~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
++||+|+||.||+|+.. .++..||+|+.+..... +-...+.+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~-------------------------------~~~~~~~~ 69 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE-------------------------------KDLSDLVS 69 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch-------------------------------HHHHHHHH
Confidence 68999999999999852 23567999997643211 11133455
Q ss_pred HHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------------
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------ 323 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------ 323 (704)
|+..+.... +++++.-..-+.......+++|||++|++|.++....
T Consensus 70 E~~~l~~l~----------~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (304)
T cd05101 70 EMEMMKMIG----------KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDL 139 (304)
T ss_pred HHHHHHhhc----------cCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHH
Confidence 655555442 1233322222333455678999999999998764320
Q ss_pred -hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 324 -LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 324 -l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
..-.++..++.+||+.|++|+|+||.||+++.+|.++++|||.++.+..
T Consensus 140 ~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 140 VSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNN 189 (304)
T ss_pred HHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceeccc
Confidence 1124778889999999999999999999999999999999999887643
No 274
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.65 E-value=2e-15 Score=158.54 Aligned_cols=240 Identities=20% Similarity=0.202 Sum_probs=147.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|..+.+|+.|++|+.+-... ...+.+.+|+..+..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--------------------------------~~~~~~~~e~~~l~~ 72 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--------------------------------QRRELLFNEVVIMRD 72 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccch--------------------------------hHHHHHHHHHHHHHH
Confidence 689999999999999988999999998641100 001223344433333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.. ++++..+..+.......+++|||++|+.|.+.... ...-.++..++.++|+.|++|+|+
T Consensus 73 ~~-----------h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 141 (285)
T cd06648 73 YQ-----------HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDI 141 (285)
T ss_pred cC-----------CCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 22 24444444444556778999999999999886432 112256778899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|.||+++.+|.++++|||++..+....... .....+.++++|+... ...++.
T Consensus 142 ~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~----------------~~~~~~~~y~aPE~~~-----------~~~~~~ 194 (285)
T cd06648 142 KSDSILLTSDGRVKLSDFGFCAQVSKEVPRR----------------KSLVGTPYWMAPEVIS-----------RLPYGT 194 (285)
T ss_pred ChhhEEEcCCCcEEEcccccchhhccCCccc----------------ccccCCccccCHHHhc-----------CCCCCC
Confidence 9999999999999999999877543321100 0001123344443211 011223
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++...- .++.-.... ...+. +.....|... .+ ...++.+.+++++||
T Consensus 195 ~~Dv~slGv~l~ell~g~--~p~~~~~~~-~~~~~------~~~~~~~~~~-----~~-------~~~~~~l~~li~~~l 253 (285)
T cd06648 195 EVDIWSLGIMVIEMVDGE--PPYFNEPPL-QAMKR------IRDNLPPKLK-----NL-------HKVSPRLRSFLDRML 253 (285)
T ss_pred cccHHHHHHHHHHHHhCC--CCCcCCCHH-HHHHH------HHhcCCCCCc-----cc-------ccCCHHHHHHHHHHc
Confidence 356677777776665421 111110011 11111 1111111110 01 125678999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
.+||..|++..+-+.|+.+
T Consensus 254 ~~~p~~Rpt~~~il~~~~~ 272 (285)
T cd06648 254 VRDPAQRATAAELLNHPFL 272 (285)
T ss_pred ccChhhCcCHHHHccCccc
Confidence 9999999999888888775
No 275
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.65 E-value=2.6e-15 Score=156.38 Aligned_cols=230 Identities=15% Similarity=0.136 Sum_probs=137.2
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
+|.|+||+||+++.+.+|+.+|+|+..+.... + .|+...
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~------~e~~~~---- 62 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-------------------------------A------IEPMVH---- 62 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-------------------------------h------hhHHHH----
Confidence 69999999999999999999999997642100 0 011110
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--h-------hHHHHHHHHHHHHHHCCccccCCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--Y-------LIEVGVYCSFNQLLEKGFYHADPH 347 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~-------l~e~~v~~~L~qLh~~G~~H~Dph 347 (704)
....+++++.-..-........++||||++|++|.++... . ..-.++..++.++|+.|++|+|++
T Consensus 63 ------~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 136 (267)
T PHA03390 63 ------QLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK 136 (267)
T ss_pred ------HHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 0111234443322233345678999999999999877432 1 122567778999999999999999
Q ss_pred CCcEEEecCC-cEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 348 PGNLFRSYDG-KLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 348 PgNILv~~dG-~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
|+||+++.++ +++++|||++......... ..+.++++|+.-.. ..++.
T Consensus 137 p~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------~~~~~y~aPE~~~~-----------~~~~~ 185 (267)
T PHA03390 137 LENVLYDRAKDRIYLCDYGLCKIIGTPSCY--------------------DGTLDYFSPEKIKG-----------HNYDV 185 (267)
T ss_pred HHHEEEeCCCCeEEEecCccceecCCCccC--------------------CCCCcccChhhhcC-----------CCCCc
Confidence 9999999998 9999999998765432110 01123333332100 01122
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..|+..+..-. ...+.+......... .....++.++++|.+||
T Consensus 186 ~~DvwslG~il~~l~~g--~~p~~~~~~~~------~~~~~~~~~~~~~~~------------~~~~~~~~~~~li~~~l 245 (267)
T PHA03390 186 SFDWWAVGVLTYELLTG--KHPFKEDEDEE------LDLESLLKRQQKKLP------------FIKNVSKNANDFVQSML 245 (267)
T ss_pred hhhHHHHHHHHHHHHHC--CCCCCCCCcch------hhHHHHHHhhcccCC------------cccccCHHHHHHHHHHh
Confidence 23556666665555442 22322111100 000000000000000 11257899999999999
Q ss_pred hccccCCCCHHHHHh-hhh
Q 005274 507 YKEGVFRIDRLESLL-TES 524 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll-~~~ 524 (704)
..||..|+++.+.++ |+.
T Consensus 246 ~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 246 KYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred ccChhhCCchHHHHhcCCc
Confidence 999999998866665 543
No 276
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=8.2e-15 Score=147.15 Aligned_cols=139 Identities=22% Similarity=0.345 Sum_probs=101.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+. +|..|+||+..+.....-..| .. .....+.+|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~-------------------------~~-----~~~~~~~~E 49 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELD-------------------------ER-----IRRERTRRE 49 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHH-------------------------HH-----HHHHHHHHH
Confidence 4799999999999987 788999999776432110001 00 011123344
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----hHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----LIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
++++..+.+ +++.+|.++....+..+++|||++|.+|.+..... -.-.++..++.++|..|++|+|+||+
T Consensus 50 ~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~ 124 (211)
T PRK14879 50 ARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTS 124 (211)
T ss_pred HHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence 444433332 46788888877778899999999999998875421 12245667899999999999999999
Q ss_pred cEEEecCCcEEEEecCCccccC
Q 005274 350 NLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 350 NILv~~dG~l~liDFGl~~~l~ 371 (704)
||+++ ++.++++|||.++...
T Consensus 125 Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 125 NMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred cEEEE-CCCEEEEECCcccCCC
Confidence 99998 8999999999988643
No 277
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.65 E-value=4.9e-15 Score=152.31 Aligned_cols=132 Identities=18% Similarity=0.193 Sum_probs=97.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+ ++..||+|..+.+-.. ...+..|+..+++
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---------------------------------~~~~~~e~~~l~~ 55 (256)
T cd05114 10 KELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---------------------------------EEDFIEEAKVMMK 55 (256)
T ss_pred eEecCCcCceEEEEEec-cCceEEEEecccCCcc---------------------------------HHHHHHHHHHHHH
Confidence 46999999999999986 6778999986643100 1234456666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-...+.......++||||++|++|.+.... . ..-.++..++.++|+.|++|+
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05114 56 LSH-----------PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124 (256)
T ss_pred CCC-----------CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 544 3433333334455678999999999999876431 1 112466778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|++|+||+++.++.++++|||++..+.
T Consensus 125 dl~p~ni~i~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05114 125 DLAARNCLVSSTGVVKVSDFGMTRYVL 151 (256)
T ss_pred ccCcceEEEcCCCeEEECCCCCccccC
Confidence 999999999999999999999987653
No 278
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.65 E-value=3.6e-15 Score=154.46 Aligned_cols=136 Identities=18% Similarity=0.299 Sum_probs=96.7
Q ss_pred ccccccccceEEEEEEccCCc---EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR---VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~---~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|.||.||+|+++.+|. .||+|..+++... +..+.+..|+..
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~e~~~ 58 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE-------------------------------KQRRDFLSEASI 58 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH-------------------------------HHHHHHHHHHHH
Confidence 579999999999999875554 6999987654211 112233445554
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHHCCc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~~G~ 341 (704)
+...+| +++.-..-+.......+++|||++|++|.++.... ..-.++..++.++|+.|+
T Consensus 59 l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (267)
T cd05066 59 MGQFDH-----------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY 127 (267)
T ss_pred HHhCCC-----------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 444433 33322222334456788999999999998875321 112466778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+|+||+||+++.+++++++|||++..+..
T Consensus 128 ~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 128 VHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred eehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999999999999999999887643
No 279
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.65 E-value=2.6e-15 Score=153.79 Aligned_cols=132 Identities=14% Similarity=0.161 Sum_probs=92.3
Q ss_pred ccccccccceEEEEEEccCC----------cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSG----------RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG----------~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+.||.|++|.||+|+++.++ ..|++|+...+.. . ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--------------------------------~-~~~ 47 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--------------------------------D-SLA 47 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--------------------------------h-HHH
Confidence 35899999999999998666 3577787653210 0 233
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFN 334 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~ 334 (704)
+.+|+..++..+| +++.-..-+... ...+++|||++|++|.++.... ..-.++..++.
T Consensus 48 ~~~e~~~l~~l~h-----------~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 115 (259)
T cd05037 48 FFETASLMSQLSH-----------KHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALH 115 (259)
T ss_pred HHHHHHHHHcCCC-----------cchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHH
Confidence 4455555544443 222111111222 5678999999999998775320 11257778899
Q ss_pred HHHHCCccccCCCCCcEEEecCC-------cEEEEecCCccccC
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDG-------KLAYIDFGMMGEFK 371 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG-------~l~liDFGl~~~l~ 371 (704)
+||+.|++|+|+||+||+++.++ .++++|||++..+.
T Consensus 116 ~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 116 YLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred HHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 99999999999999999999888 79999999988654
No 280
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.65 E-value=5.4e-15 Score=155.24 Aligned_cols=135 Identities=21% Similarity=0.209 Sum_probs=93.5
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||+|++|.||+|+.+. .+..||||+....... ..+.
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------------~~~~ 54 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-------------------------------------RERI 54 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH-------------------------------------HHHH
Confidence 579999999999998652 3558999986532110 0111
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------------h--hHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------------Y--LIEVGVY 330 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------------~--l~e~~v~ 330 (704)
++.+|...+.++ . ++++....-+.......+++|||++|++|.+.... . ..-.++.
T Consensus 55 ~~~~e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 129 (288)
T cd05061 55 EFLNEASVMKGF----T-CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 129 (288)
T ss_pred HHHHHHHHHHhC----C-CCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHH
Confidence 233333322221 1 24443333334445678999999999999987532 0 1224677
Q ss_pred HHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++.++|+.|++|+|+||.||+++.++.++++|||+++.+.
T Consensus 130 ~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 130 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 170 (288)
T ss_pred HHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccc
Confidence 78999999999999999999999999999999999987553
No 281
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.65 E-value=4.7e-15 Score=152.48 Aligned_cols=130 Identities=19% Similarity=0.277 Sum_probs=93.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|.. .|..||+|..+.+. ..+.+.+|+..++.
T Consensus 12 ~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~----------------------------------~~~~~~~e~~~l~~ 55 (256)
T cd05082 12 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA----------------------------------TAQAFLAEASVMTQ 55 (256)
T ss_pred eeecccCCCeEEEEEE--cCCcEEEEEeCCCc----------------------------------hHHHHHHHHHHHHh
Confidence 5799999999999987 58899999875321 01223344444433
Q ss_pred HhhHHHHHHHhcCCccee-eceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++. ....+.+..+..+++|||++|++|.+.... ...-.++..++.++|+.|++
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (256)
T cd05082 56 LRH-----------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFV 124 (256)
T ss_pred CCC-----------CCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 332 2222 222233344567999999999999876431 11225677889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|++|+||+++.+|.++++|||++....
T Consensus 125 H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 153 (256)
T cd05082 125 HRDLAARNVLVSEDNVAKVSDFGLTKEAS 153 (256)
T ss_pred ccccchheEEEcCCCcEEecCCccceecc
Confidence 99999999999999999999999987543
No 282
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.65 E-value=2.1e-15 Score=156.08 Aligned_cols=134 Identities=18% Similarity=0.181 Sum_probs=96.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.|++|.||+|+++.++..||||........ -.+.+.+|+..++.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 61 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR--------------------------------YVQPLHEEIALHSY 61 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHH--------------------------------HHHHHHHHHHHHHh
Confidence 5799999999999999889999999987643211 01223344433333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------hHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------LIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.-...+.......+++|||++|++|.+..... ..-.++..++.+||+.|++
T Consensus 62 l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~ 130 (268)
T cd06624 62 LKH-----------RNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV 130 (268)
T ss_pred cCC-----------CCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 322 44433323334456788999999999998864321 1224677889999999999
Q ss_pred ccCCCCCcEEEec-CCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSY-DGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~-dG~l~liDFGl~~~l~ 371 (704)
|+|+||.||+++. ++.++++|||++..+.
T Consensus 131 h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 131 HRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred ecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 9999999999976 6799999999987653
No 283
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.65 E-value=5.1e-15 Score=159.29 Aligned_cols=136 Identities=21% Similarity=0.320 Sum_probs=94.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.++.+|+.||||+........ .....+.+|+..+..
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~------------------------------~~~~~~~~E~~~l~~ 62 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA------------------------------TDAQRTFREIMFLQE 62 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc------------------------------hhhhhhhHHHHHHHH
Confidence 57999999999999998889999999875321100 011233455555554
Q ss_pred H-hhHHHHHHHhcCCccee-eceeeee-cccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 A-KNGLKFRQLYGGIQDVL-IPEMYVE-QTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a-~n~~~f~~~~~~~~~V~-vP~v~~e-~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H 343 (704)
. +| +++. +...+.. .....++||||++| +|.+.... ...-.++..++.+||+.|++|
T Consensus 63 l~~h-----------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H 130 (337)
T cd07852 63 LGDH-----------PNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIH 130 (337)
T ss_pred hcCC-----------CCccceeeeeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4 22 3321 1111111 12346899999976 66654321 112357778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|+||+++.+|.++++|||++..+..
T Consensus 131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 131 RDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred CCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 99999999999999999999999886543
No 284
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.65 E-value=3.4e-15 Score=154.55 Aligned_cols=140 Identities=16% Similarity=0.213 Sum_probs=97.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|++|.||+|....+|..||+|+.+...... ...+....+.+|+..++
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~---------------------------~~~~~~~~~~~e~~~l~ 59 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP---------------------------ETSKEVSALECEIQLLK 59 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc---------------------------hhHHHHHHHHHHHHHHH
Confidence 367999999999999998899999999876432110 00112233445555444
Q ss_pred HHhhHHHHHHHhcCCcceeec-eeeeec-ccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIP-EMYVEQ-TTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP-~v~~e~-ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
..+| +++.-. ..+.+. ....+++|||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 60 ~l~h-----------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~ 128 (266)
T cd06651 60 NLQH-----------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIV 128 (266)
T ss_pred HcCC-----------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4433 333221 222221 2456899999999999876431 11235777889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|++|.||+++.+++++++|||++..+.
T Consensus 129 H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 129 HRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred eCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99999999999999999999999987654
No 285
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.65 E-value=4.1e-15 Score=153.17 Aligned_cols=134 Identities=20% Similarity=0.219 Sum_probs=93.3
Q ss_pred cccccccceEEEEEE--ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARL--RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 196 PIgsGS~GQVyrA~l--k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.||+|++|.||+|.. +.++..||||+.+...... ...+.+..|+..+.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~e~~~l~ 51 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP------------------------------ALKDELLREANVMQ 51 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH------------------------------HHHHHHHHHHHHHH
Confidence 489999999999965 4578899999976432110 11223344444444
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
...| +++.-..-+.+ ....+++|||+++++|.++... ...-.++..++.++|+.|++|+
T Consensus 52 ~l~h-----------~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~ 119 (257)
T cd05116 52 QLDN-----------PYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHR 119 (257)
T ss_pred hCCC-----------CCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 3332 33322211222 3456899999999999876432 1122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||.||+++.++.++++|||++..+.
T Consensus 120 dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 120 DLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred ccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999999999999999987654
No 286
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.65 E-value=3.4e-15 Score=155.79 Aligned_cols=243 Identities=16% Similarity=0.173 Sum_probs=142.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||+|+.++... ....+..|+..+..
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---------------------------------~~~~~~~e~~~l~~ 70 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---------------------------------IDEEIEAEYNILKA 70 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccc---------------------------------hHHHHHHHHHHHHH
Confidence 579999999999999998999999998754210 00122334333333
Q ss_pred HhhHHHHHHHhcCCcceeec-eeee----ecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIP-EMYV----EQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQL 336 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP-~v~~----e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qL 336 (704)
.. +++++.-. ..+. +.....+++|||++|++|.++... .+ .-.++..++.+|
T Consensus 71 l~----------~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 140 (286)
T cd06638 71 LS----------DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL 140 (286)
T ss_pred Hh----------cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH
Confidence 21 22333221 2221 123457999999999999876421 11 224667788999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|+.|++|+|+||+||+++.+|.++++|||++..+...... .+ ....+.++++|+.-...
T Consensus 141 H~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-----------~~-----~~~~~~~y~aPE~~~~~----- 199 (286)
T cd06638 141 HVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-----------RN-----TSVGTPFWMAPEVIACE----- 199 (286)
T ss_pred HhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCc-----------cc-----cccCCCcccChhhhchh-----
Confidence 9999999999999999999999999999998765432110 00 00123445555532110
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCCh
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
......++...|.|++|.++.++... +.++.-......+.+ +.....|.. ..| ...+.
T Consensus 200 -~~~~~~~~~~~Dv~slGvi~~el~~g--~~p~~~~~~~~~~~~-------~~~~~~~~~-----~~~-------~~~~~ 257 (286)
T cd06638 200 -QQLDSTYDARCDVWSLGITAIELGDG--DPPLADLHPMRALFK-------IPRNPPPTL-----HQP-------ELWSN 257 (286)
T ss_pred -hhccccccchhhhhhHHHHHHHHhcC--CCCCCCCchhHHHhh-------ccccCCCcc-----cCC-------CCcCH
Confidence 00011123345677777777665532 111111111111100 000000000 001 12366
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhh
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
++++++.+|+..||..|++.-|.+.|.
T Consensus 258 ~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 258 EFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 899999999999999999988877664
No 287
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.65 E-value=1.6e-15 Score=157.32 Aligned_cols=137 Identities=20% Similarity=0.312 Sum_probs=96.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+...+|+.|++|..+...... .....+.+|+..++.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------~~~~~~~~e~~~l~~ 54 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE------------------------------GIPKTALREIKLLKE 54 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccc------------------------------hhHHHHHHHHHHHHH
Confidence 46999999999999998899999999876432110 112344556665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| ..+.+.++ +....+..+++|||+++ ++.+.... . ..-.++..++.+||+.|++|+
T Consensus 55 l~~-~~i~~~~~----------~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (283)
T cd05118 55 LNH-PNIIKLLD----------VFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHR 122 (283)
T ss_pred hcC-CCcchHHH----------hhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 543 11111111 12234678899999987 55554321 1 122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
|+||.||+++.++.++++|||.+......
T Consensus 123 dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 123 DLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred CcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 99999999999999999999998776554
No 288
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.64 E-value=3.5e-15 Score=154.39 Aligned_cols=136 Identities=18% Similarity=0.237 Sum_probs=92.9
Q ss_pred ccccccccceEEEEEEccCCc--EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR--VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~--~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.||+|++|.||+|+...+++ .||||..+...... .-...+..|+..+
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~------------------------------~~~~~~~~E~~~l 54 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR------------------------------SEMEDFLSEAVCM 54 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH------------------------------HHHHHHHHHHHHH
Confidence 469999999999999976665 69999876432110 1112334444444
Q ss_pred HHHhhHHHHHHHhcCCccee-eceeee-----ecccceeEEEEeccCCChhhHHhh---------------hhHHHHHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVL-IPEMYV-----EQTTRKVLIMEWVEGQKLSEVKDL---------------YLIEVGVYC 331 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~-vP~v~~-----e~ss~~vLVmE~i~G~~L~d~~~~---------------~l~e~~v~~ 331 (704)
+..+| +++. +..... ......+++|||++|++|.+.... ...-.++..
T Consensus 55 ~~l~h-----------~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 123 (272)
T cd05075 55 KEFDH-----------PNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIAS 123 (272)
T ss_pred HhCCC-----------CCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHH
Confidence 44433 2221 111111 112356899999999998765310 111256778
Q ss_pred HHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 332 SFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 332 ~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++.+||+.|++|+|+||+||+++.++.++++|||+++.+.
T Consensus 124 ~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (272)
T cd05075 124 GMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIY 163 (272)
T ss_pred HHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccC
Confidence 8999999999999999999999999999999999988764
No 289
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.64 E-value=4.7e-15 Score=160.36 Aligned_cols=143 Identities=23% Similarity=0.327 Sum_probs=98.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
..+||+|++|+||+|+...+|+.||||+....... .+....+.+|+..++
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------------------------~~~~~~~~~E~~~l~ 69 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS------------------------------AIHAKRTYRELRLLK 69 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccch------------------------------hhHHHHHHHHHHHHH
Confidence 36899999999999999989999999987643111 012234456777766
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccC
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
...| ..+..... +..+.-........++||||+ |.+|.++... ...-.++..++.++|+.|++|+|
T Consensus 70 ~l~h-~~iv~~~~----~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~d 143 (343)
T cd07851 70 HMDH-ENVIGLLD----VFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRD 143 (343)
T ss_pred hccC-CCHHHHHH----HhhccccccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 6654 22222211 111111112234578999999 5677766432 11225677789999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|.||+++.+|+++++|||++.....
T Consensus 144 lkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 144 LKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred CCHHHeEECCCCCEEEccccccccccc
Confidence 999999999999999999999887654
No 290
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.64 E-value=1.8e-15 Score=157.41 Aligned_cols=136 Identities=20% Similarity=0.341 Sum_probs=92.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...+|+.|+||........ . ++ ....+|++.+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~----------------------------~~--~~~~~e~~~l~~ 53 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-W----------------------------EE--CMNLREVKSLRK 53 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccc-h----------------------------hH--HHHHHHHHHHHh
Confidence 4699999999999999888999999986532110 0 00 111234444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----h-------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----Y-------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~-------l~e~~v~~~L~qLh~~G~~H 343 (704)
.++ ++++.-...+.......++||||+ ++.+.+.... . ..-.++..++.+||+.|++|
T Consensus 54 ~~~----------h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H 122 (283)
T cd07830 54 LNE----------HPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFH 122 (283)
T ss_pred ccC----------CCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 431 122221111222356788999999 5566554321 1 11256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|+||+++.++.++++|||.+.....
T Consensus 123 ~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 123 RDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred CCCChhhEEEcCCCCEEEeecccceeccC
Confidence 99999999999999999999999886643
No 291
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.64 E-value=1.9e-15 Score=161.21 Aligned_cols=135 Identities=19% Similarity=0.175 Sum_probs=95.6
Q ss_pred ccccccccceEEEEEEccCCcE----EEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRV----VAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~----VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|+||+||+|+++.+|+. ||||+.++.... .....+.+|+.
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~~ 61 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP-------------------------------KANKEILDEAY 61 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCH-------------------------------HHHHHHHHHHH
Confidence 5799999999999998766664 899997643211 11223444544
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------h--hHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------Y--LIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~--l~e~~v~~~L~qLh~~G 340 (704)
.+...+| +++.-..-+. .....++++||++++.+.+.... . ....++..++.+||+.|
T Consensus 62 ~l~~l~h-----------~niv~~~g~~-~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (316)
T cd05108 62 VMASVDN-----------PHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129 (316)
T ss_pred HHHhCCC-----------CCCCeEEEEE-cCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4444333 3332211122 23457899999999999876432 1 12257788999999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||+||+++.++.++++|||+++.+..
T Consensus 130 iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999999999999999999987653
No 292
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.64 E-value=3.8e-15 Score=153.60 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=96.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|... +++.||||..+++-.. .+.+.+|+..+..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---------------------------------~~~~~~e~~~l~~ 57 (261)
T cd05068 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---------------------------------PKDFLAEAQIMKK 57 (261)
T ss_pred EEecccCCccEEEEEec-CCeEEEEEeeCCCccc---------------------------------HHHHHHHHHHHHH
Confidence 67999999999999986 6788999998753110 1123344444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+.......+++|||++|++|.+.... ...-.++..++.++|+.|++|
T Consensus 58 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 126 (261)
T cd05068 58 LRH-----------PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIH 126 (261)
T ss_pred CCC-----------CCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 333 3333222244455678999999999999877431 112246677899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+||+||+++.+|.++++|||++..+.
T Consensus 127 ~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 154 (261)
T cd05068 127 RDLAARNVLVGENNICKVADFGLARVIK 154 (261)
T ss_pred ccCCcceEEEcCCCCEEECCcceEEEcc
Confidence 9999999999999999999999988765
No 293
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=1.5e-16 Score=187.47 Aligned_cols=194 Identities=18% Similarity=0.192 Sum_probs=117.0
Q ss_pred cceeEEEEeccCCChhhHHhhh-h---------HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 302 TRKVLIMEWVEGQKLSEVKDLY-L---------IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 302 s~~vLVmE~i~G~~L~d~~~~~-l---------~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.-.|+-||||+-..+.++.+.. . .=.++.+++.|+|+.|++|||+||.||++++++.|||.|||+++...
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 3468999999998888875431 1 11578899999999999999999999999999999999999998743
Q ss_pred hhHHHHHHH-HHHHhhccChh-HHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCC
Q 005274 372 EELREGFIE-ACLHLVNRDFD-ALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKF 449 (704)
Q Consensus 372 ~~~r~~~~~-~~~~l~~~d~~-~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~ 449 (704)
......... .......+... .....+.+.=|.+||..... ....|+..+|.+++|-++-+|+ ||
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~--------~~~~Yn~KiDmYSLGIVlFEM~-----yP- 814 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT--------SSNKYNSKIDMYSLGIVLFEML-----YP- 814 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc--------ccccccchhhhHHHHHHHHHHh-----cc-
Confidence 211111000 00001111111 22233334444444432110 1124667778888888876654 23
Q ss_pred CCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 450 RIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 450 ~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++..+.++. ++-++- ++.+.. | ..+..+.-|.-..+++.||..||.+|.++.|-|-++.+
T Consensus 815 -F~TsMERa~----iL~~LR---~g~iP~-----~---~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~ll 874 (1351)
T KOG1035|consen 815 -FGTSMERAS----ILTNLR---KGSIPE-----P---ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELL 874 (1351)
T ss_pred -CCchHHHHH----HHHhcc---cCCCCC-----C---cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCC
Confidence 333333221 111111 222211 1 11223556788899999999999999999997766544
No 294
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.64 E-value=5.8e-15 Score=151.67 Aligned_cols=248 Identities=16% Similarity=0.132 Sum_probs=147.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|....+|..||+|+....... .....+.+|+..++.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 55 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ-------------------------------TSVDELRKEVQAMSQ 55 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc-------------------------------hHHHHHHHHHHHHHh
Confidence 5799999999999999889999999997532111 011234445544444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----h-------HHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----L-------IEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----l-------~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++.-..-........+++|||++|++|.+..... + .-.++..++.+||+.|++
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~ 124 (267)
T cd06610 56 CNH-----------PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQI 124 (267)
T ss_pred cCC-----------CCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 333 33333222334466789999999999988775321 1 125667788999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|+|++|.||++++++.++++|||++..+........ ........+.++++|+.-... .
T Consensus 125 h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~------------~~~~~~~~~~~y~~Pe~~~~~----------~ 182 (267)
T cd06610 125 HRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR------------KVRKTFVGTPCWMAPEVMEQV----------H 182 (267)
T ss_pred cCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc------------cccccccCChhhcChHHHccc----------c
Confidence 999999999999999999999999876554321100 000000112233333321100 0
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
..+...|.|++|.++.++... +.++.-.+......+. .....+.+.. ..+ ....++++++++
T Consensus 183 ~~~~~~Dv~slG~i~~~l~~g--~~p~~~~~~~~~~~~~-------~~~~~~~~~~---~~~------~~~~~~~~~~li 244 (267)
T cd06610 183 GYDFKADIWSFGITAIELATG--AAPYSKYPPMKVLMLT-------LQNDPPSLET---GAD------YKKYSKSFRKMI 244 (267)
T ss_pred CcCcccchHhHhHHHHHHHhC--CCCccccChhhhHHHH-------hcCCCCCcCC---ccc------cccccHHHHHHH
Confidence 122234667777777666542 2222211111111111 1111111111 000 235578899999
Q ss_pred HHhhhccccCCCCHHHHHhhhh
Q 005274 503 VALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 503 ~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
++++.+||..|++..+-+.|+.
T Consensus 245 ~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 245 SLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred HHHcCCChhhCcCHHHHhhCCC
Confidence 9999999999999877776653
No 295
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.64 E-value=7.3e-15 Score=151.60 Aligned_cols=131 Identities=14% Similarity=0.228 Sum_probs=93.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|++. ++..||+|+.+++-. ....+.+|+.+++.
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~~---------------------------------~~~~~~~E~~~l~~ 57 (260)
T cd05069 12 VKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGTM---------------------------------MPEAFLQEAQIMKK 57 (260)
T ss_pred eeecCcCCCeEEEEEEc-CCceEEEEEcccCCc---------------------------------cHHHHHHHHHHHHh
Confidence 46999999999999986 556799999775411 01223345554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++. |-.........+++|||++|++|.+.... ...-.++..++.+||+.|++|
T Consensus 58 l~h-----------~~i~-~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H 125 (260)
T cd05069 58 LRH-----------DKLV-PLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIH 125 (260)
T ss_pred CCC-----------CCee-eEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 333 3322 11111123567899999999999876532 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+||+||+++.++.++++|||.+..+.
T Consensus 126 ~dl~~~Nill~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05069 126 RDLRAANILVGDNLVCKIADFGLARLIE 153 (260)
T ss_pred cccCcceEEEcCCCeEEECCCccceEcc
Confidence 9999999999999999999999987654
No 296
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.64 E-value=7.2e-15 Score=153.23 Aligned_cols=135 Identities=22% Similarity=0.245 Sum_probs=93.5
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|.++. ++..||+|........ ..+.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~-------------------------------------~~~~ 54 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE-------------------------------------QDES 54 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH-------------------------------------HHHH
Confidence 579999999999999986 6788999987543211 0122
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------------hHHHHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------------LIEVGVYCSF 333 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------------l~e~~v~~~L 333 (704)
++.+|.....++ . ++++.--.-+.......+++|||++|++|.++.... -.-.++..++
T Consensus 55 ~~~~e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l 129 (277)
T cd05036 55 DFLMEALIMSKF----N-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGC 129 (277)
T ss_pred HHHHHHHHHHhC----C-CCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 333443322222 1 233332222233445678999999999998864321 1225677889
Q ss_pred HHHHHCCccccCCCCCcEEEecCC---cEEEEecCCccccC
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDG---KLAYIDFGMMGEFK 371 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG---~l~liDFGl~~~l~ 371 (704)
.+||+.|++|+|+||+||+++.+| .++++|||++..+.
T Consensus 130 ~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 130 KYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 999999999999999999998765 59999999988663
No 297
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.64 E-value=6.7e-16 Score=162.68 Aligned_cols=143 Identities=20% Similarity=0.307 Sum_probs=92.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+........ .......+|+..++.
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------~~~~~~~~e~~~l~~ 63 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD------------------------------GFPITALREIKILKK 63 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC------------------------------CcchhHHHHHHHHHh
Confidence 57999999999999999899999999875432110 001123455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh----------hhhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD----------LYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~----------~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| .++.+.++.... -+..........++||||+++. +..... ....-.++..++.+||+.|++|+
T Consensus 64 l~h-~~i~~~~~~~~~--~~~~~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~ 139 (311)
T cd07866 64 LKH-PNVVPLIDMAVE--RPDKSKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHR 139 (311)
T ss_pred cCC-CCccchhhheec--ccccccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 544 111111110000 0000011223468999999764 333211 11223567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|++|+||+++.+|.++++|||++....
T Consensus 140 dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 140 DIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CCCHHHEEECCCCCEEECcCccchhcc
Confidence 999999999999999999999987654
No 298
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.64 E-value=1.4e-15 Score=156.65 Aligned_cols=243 Identities=17% Similarity=0.160 Sum_probs=142.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+.+.+|+.|++|+...... ....+.+|++.++.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------------------------~~~~~~~e~~~l~~ 58 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---------------------------------EEEEIKEEYNILRK 58 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCch---------------------------------hHHHHHHHHHHHHH
Confidence 679999999999999988999999999864321 01234455555444
Q ss_pred HhhHHHHHHHhcCCccee-eceeee-----ecccceeEEEEeccCCChhhHHhh------h-------hHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYV-----EQTTRKVLIMEWVEGQKLSEVKDL------Y-------LIEVGVYCSFNQ 335 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~-----e~ss~~vLVmE~i~G~~L~d~~~~------~-------l~e~~v~~~L~q 335 (704)
..+ ++++. +...+. ......+++|||++|++|.++... . ..-.++..++.+
T Consensus 59 ~~~----------h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 59 YSN----------HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred hcC----------CCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 321 12211 111111 113346899999999998876432 1 122467778999
Q ss_pred HHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHH
Q 005274 336 LLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKA 415 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~ 415 (704)
||+.|++|+|++|.||+++.+|.++++|||++.......... .....+.++++|+.-...
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~----------------~~~~~~~~y~aPE~~~~~---- 188 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR----------------NTFIGTPYWMAPEVIACD---- 188 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhh----------------cCccccccccCHhHhccc----
Confidence 999999999999999999999999999999987654322110 000112334444321000
Q ss_pred HHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCC
Q 005274 416 LTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSS 495 (704)
Q Consensus 416 L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~s 495 (704)
......++...|.|++|.++.++... ..++.-......+. .+.....+... .+ ...+
T Consensus 189 --~~~~~~~~~~~Dv~slG~il~~l~~g--~~p~~~~~~~~~~~-------~~~~~~~~~~~-----~~-------~~~~ 245 (275)
T cd06608 189 --EQPDASYDARSDVWSLGITAIELADG--KPPLCDMHPMRALF-------KIPRNPPPTLK-----SP-------ENWS 245 (275)
T ss_pred --ccccCCccccccHHHhHHHHHHHHhC--CCCccccchHHHHH-------HhhccCCCCCC-----ch-------hhcC
Confidence 00001122234667777766665542 11221100111110 11111111110 01 1357
Q ss_pred hHHHHHHHHhhhccccCCCCHHHHHhhh
Q 005274 496 PQLKSSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 496 p~lr~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
.+++++++++|..||..|.+..+-+.|+
T Consensus 246 ~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 246 KKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred HHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 7899999999999999999987777664
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.64 E-value=5e-15 Score=154.95 Aligned_cols=247 Identities=20% Similarity=0.222 Sum_probs=154.7
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
..+.|... +.+|.|++|+||+|.+..+++.|++|+.+.... ....
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---------------------------------~~~~ 61 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---------------------------------NKEL 61 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch---------------------------------hHHH
Confidence 34445444 579999999999999988899999999874321 1123
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---h-------HHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY---L-------IEVGVYCSFN 334 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~---l-------~e~~v~~~L~ 334 (704)
+..|++.+...+| +++.-...+.......+++|||++|++|.++.... + .-.++..++.
T Consensus 62 ~~~e~~~l~~l~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~ 130 (286)
T cd06614 62 IINEILIMKDCKH-----------PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLE 130 (286)
T ss_pred HHHHHHHHHHCCC-----------CCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 4445554444433 34433333344557889999999999999875432 1 2256677899
Q ss_pred HHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHH
Q 005274 335 QLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTK 414 (704)
Q Consensus 335 qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~ 414 (704)
+||..|++|+|++|+||+++.+|.++++|||.+.......... ...+...++++|+.-.
T Consensus 131 ~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~----------------~~~~~~~~y~~PE~~~----- 189 (286)
T cd06614 131 YLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR----------------NSVVGTPYWMAPEVIK----- 189 (286)
T ss_pred HHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh----------------ccccCCcccCCHhHhc-----
Confidence 9999999999999999999999999999999876554321100 0001123444444211
Q ss_pred HHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCC
Q 005274 415 ALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDS 494 (704)
Q Consensus 415 ~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~ 494 (704)
...++...|.|++|.++.++.... .++.......... .. ...--+... -....
T Consensus 190 ------~~~~~~~~Dv~slGvil~~l~~g~--~p~~~~~~~~~~~-~~------~~~~~~~~~------------~~~~~ 242 (286)
T cd06614 190 ------RKDYGPKVDIWSLGIMCIEMAEGE--PPYLREPPLRALF-LI------TTKGIPPLK------------NPEKW 242 (286)
T ss_pred ------CCCCCCccccHHHHHHHHHHHhCC--CCCCCCCHHHHHH-HH------HhcCCCCCc------------chhhC
Confidence 112234467788888877766421 1221111111111 00 000000000 00124
Q ss_pred ChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 495 SPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 495 sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+.++++++++++..+|..|.+..+-|.|..+
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 273 (286)
T cd06614 243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFL 273 (286)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhChHh
Confidence 6789999999999999999999888888876
No 300
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.64 E-value=2.3e-15 Score=162.94 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++..++.++|+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 180 ~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~ 224 (337)
T cd05054 180 FQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIY 224 (337)
T ss_pred HHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcc
Confidence 567788999999999999999999999999999999999998764
No 301
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.64 E-value=1e-15 Score=155.41 Aligned_cols=138 Identities=21% Similarity=0.279 Sum_probs=101.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.|++|+.+..... ....+.+.+|++.++.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS------------------------------EEELEALEREIRILSS 55 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc------------------------------hHHHHHHHHHHHHHHH
Confidence 6799999999999999889999999998643211 1112344556555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhhh---------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDLY---------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~~---------l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-..... ...+++|||++|++|.++.... -.-.++..++.+||+.|++|
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h 124 (260)
T cd06606 56 LQH-----------PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVH 124 (260)
T ss_pred cCC-----------CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 443 3433322233334 5788999999999998874321 12256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
+|++|.||+++.+|.++++|||.+......
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 125 RDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred cCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999999999999999998876544
No 302
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.64 E-value=2.6e-15 Score=173.50 Aligned_cols=249 Identities=19% Similarity=0.181 Sum_probs=152.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
++.||+|+|++||.|++...|.+||+|.+.-.-+ +--+.+.+|+++++
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de--------------------------------~~L~~v~~EI~~MK 89 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE--------------------------------EALNAVKREIDIMK 89 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCH--------------------------------HHHHHHHHHHHHHH
Confidence 4689999999999999987779999998763311 12245678999999
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----hHH-------HHHHHHHHHHHHCC--
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----LIE-------VGVYCSFNQLLEKG-- 340 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----l~e-------~~v~~~L~qLh~~G-- 340 (704)
.+++.+++..+++....-..-.. ..-...|-||||.|+.|-|+...+ +.+ .+++.++.+||...
T Consensus 90 ~L~gh~nIV~yidss~~~~~~~~---~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pP 166 (738)
T KOG1989|consen 90 LLSGHKNIVSYIDSSAINRSSNN---GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPP 166 (738)
T ss_pred HhcCCCceeeEeccccccccCCC---ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCc
Confidence 98876666665542111000000 011346999999999998886532 222 45667788899887
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH-HHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG-FIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~-~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
++|||||-+|||+..+|+.||||||.++..-...+.. -+.+ +..+.. -+-++-|-.||+ -.+
T Consensus 167 iIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~----ve~eI~----k~TTp~YRsPEM---------IDl 229 (738)
T KOG1989|consen 167 IIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNY----VEEEIE----KYTTPQYRSPEM---------IDL 229 (738)
T ss_pred cchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHH----HHHHHH----hhCCccccChHH---------Hhh
Confidence 9999999999999999999999999988643222110 0000 111100 011222322221 111
Q ss_pred HHH-HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHH
Q 005274 420 FQN-AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQL 498 (704)
Q Consensus 420 ~~~-~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~l 498 (704)
+.+ ..+...|.|.+|+++..|. .|..||.-- |-...++-+|.+-.. ...+..+
T Consensus 230 ysg~pI~eKsDIWALGclLYkLC--y~t~PFe~s--------------g~laIlng~Y~~P~~----------p~ys~~l 283 (738)
T KOG1989|consen 230 YSGLPIGEKSDIWALGCLLYKLC--YFTTPFEES--------------GKLAILNGNYSFPPF----------PNYSDRL 283 (738)
T ss_pred hcCCCCcchhHHHHHHHHHHHHH--HhCCCcCcC--------------cceeEEeccccCCCC----------ccHHHHH
Confidence 111 1233456677777766553 234444322 233445556665211 2456778
Q ss_pred HHHHHHhhhccccCCCCHHHHH
Q 005274 499 KSSLVALLYKEGVFRIDRLESL 520 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~L 520 (704)
+++++.||.-||..|.+-.+-+
T Consensus 284 ~~LI~~mL~~nP~~RPnI~Qv~ 305 (738)
T KOG1989|consen 284 KDLIRTMLQPNPDERPNIYQVL 305 (738)
T ss_pred HHHHHHHhccCcccCCCHHHHH
Confidence 8999999999999998765533
No 303
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.64 E-value=2.5e-15 Score=154.23 Aligned_cols=135 Identities=20% Similarity=0.302 Sum_probs=99.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+...+++.|++|+....... ..+.+.+|+..+..
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 56 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--------------------------------DFEIIQQEISMLKE 56 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--------------------------------hHHHHHHHHHHHHh
Confidence 6799999999999999889999999998643111 11334455555555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......+++|||++|+.|.++... . ..-.++..++.+||+.|++|+
T Consensus 57 ~~h-----------~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~ 125 (262)
T cd06613 57 CRH-----------PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHR 125 (262)
T ss_pred CCC-----------CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceec
Confidence 444 2322111233445678899999999999886432 1 122566778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|++|.||+++.+|.++++|||++..+..
T Consensus 126 dl~p~ni~i~~~~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 126 DIKGANILLTEDGDVKLADFGVSAQLTA 153 (262)
T ss_pred CCChhhEEECCCCCEEECccccchhhhh
Confidence 9999999999999999999999876543
No 304
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.64 E-value=5.4e-15 Score=152.27 Aligned_cols=133 Identities=17% Similarity=0.249 Sum_probs=97.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|... ++..||+|...++-.. .+.+.+|++.++.
T Consensus 12 ~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~---------------------------------~~~~~~e~~~l~~ 57 (261)
T cd05072 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMS---------------------------------VQAFLEEANLMKT 57 (261)
T ss_pred eecCCcCCceEEEEEec-CCceEEEEEccCCchh---------------------------------HHHHHHHHHHHHh
Confidence 56999999999999976 7888999987653110 1233445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------h-----hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------Y-----LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~-----l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+.......+++|||++|++|.++... . ..-.++..++.+||+.|++|
T Consensus 58 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H 126 (261)
T cd05072 58 LQH-----------DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 126 (261)
T ss_pred CCC-----------CCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 333 4443333344445667899999999999876432 0 11256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|+||+++.+|.+++.|||.+..+..
T Consensus 127 ~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 127 RDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred cccchhhEEecCCCcEEECCCccceecCC
Confidence 99999999999999999999999987643
No 305
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.64 E-value=8.7e-15 Score=151.58 Aligned_cols=133 Identities=18% Similarity=0.126 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEcc--CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQ--SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~--tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.||.|+||+||+|+... ....||+|..+..... +....+.+|+..++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~~~~~~e~~~~~ 50 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATP-------------------------------DEQLLFLQEVQPYR 50 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCCh-------------------------------HHHHHHHHHHHHHH
Confidence 48999999999997642 3356888876532111 11122333433333
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------------hhHHHHHHHHHHHHHHC
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------------~l~e~~v~~~L~qLh~~ 339 (704)
..+ ++++.-..-+.......++||||++|++|.++... ...-.++..++.++|+.
T Consensus 51 ~l~-----------h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 51 ELN-----------HPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred hCC-----------CCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 222 24433222233345678999999999999886432 01225677889999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|++|+|+||.||+++.++.++++|||++...
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred CEecccccHhheEecCCCcEEEecccccccc
Confidence 9999999999999999999999999998654
No 306
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.64 E-value=3.9e-15 Score=152.93 Aligned_cols=247 Identities=19% Similarity=0.230 Sum_probs=149.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...+|+.||||+.+..... .+..+.+..|+..++.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~~~~ 55 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND------------------------------PKTIKEIADEMKVLEL 55 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc------------------------------hHHHHHHHHHHHHHHh
Confidence 6799999999999999889999999998743211 1122445566666555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---------hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY---------LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~---------l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ..+.+.++ +....+..++|+||++|++|.++.... ..-.++..++.+||+.|++|+|
T Consensus 56 l~~-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d 124 (264)
T cd06626 56 LKH-PNLVKYYG----------VEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD 124 (264)
T ss_pred CCC-CChhheee----------eEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 544 12222111 223356788999999999999875321 1225677789999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVA 425 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~ 425 (704)
++|+||+++.+|.++++|||.+........... .. .. ......++++|+...... .....
T Consensus 125 l~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~-~~--------~~---~~~~~~~~~~PE~~~~~~--------~~~~~ 184 (264)
T cd06626 125 IKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG-EE--------VQ---SLAGTPAYMAPEVITGGK--------GKGHG 184 (264)
T ss_pred CCHHHEEECCCCCEEEcccccccccCCCCCccc-cc--------cc---CCcCCcCccChhhccCCC--------CCCCC
Confidence 999999999999999999999887654321100 00 00 001123455554321100 00123
Q ss_pred ccCCccCHHhHHHHHHHHHhhcCCC-CChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHH
Q 005274 426 KGVRNISFGDLLGNLGATMYKFKFR-IPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVA 504 (704)
Q Consensus 426 ~~~~~~s~~~i~~~L~~~~~~~~~~-iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~ 504 (704)
...+.|++|.++.++... ..++. .........+ +.....|. .|. ....++.+++++++
T Consensus 185 ~~~Dv~s~G~il~~l~~g--~~pf~~~~~~~~~~~~-------~~~~~~~~-------~~~-----~~~~~~~~~~li~~ 243 (264)
T cd06626 185 RAADIWSLGCVVLEMATG--KRPWSELDNEFQIMFH-------VGAGHKPP-------IPD-----SLQLSPEGKDFLDR 243 (264)
T ss_pred cccchHHHHHHHHHHHhC--CCCccCCcchHHHHHH-------HhcCCCCC-------CCc-----ccccCHHHHHHHHH
Confidence 345667777777666542 12221 1011111110 01111111 111 01347889999999
Q ss_pred hhhccccCCCCHHHHHhhh
Q 005274 505 LLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 505 lL~~d~~~R~~rle~Ll~~ 523 (704)
+|..||..|++.-+-+.|+
T Consensus 244 ~l~~~p~~R~~~~~i~~~~ 262 (264)
T cd06626 244 CLESDPKKRPTASELLQHP 262 (264)
T ss_pred HccCCcccCCCHHHHhcCC
Confidence 9999999999987766654
No 307
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.64 E-value=5.4e-15 Score=153.12 Aligned_cols=135 Identities=20% Similarity=0.295 Sum_probs=97.7
Q ss_pred ccccccccceEEEEEEccCCc---EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR---VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~---~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+-||.|++|.||+|+++.+|+ .||||+....... .....+..|++.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~~~ 58 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTE-------------------------------KQRRDFLSEASI 58 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCH-------------------------------HHHHHHHHHHHH
Confidence 569999999999999987665 5999997643211 112334455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~ 341 (704)
++..+| +++.-..-+.......++||||++|+.|.++... ...-.++..++.++|+.|+
T Consensus 59 l~~l~h-----------~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~ 127 (269)
T cd05065 59 MGQFDH-----------PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY 127 (269)
T ss_pred HHhCCC-----------cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 554443 3333322333445667999999999999876432 1112466778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+|+||.||+++.++.++++|||.+..+.
T Consensus 128 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 128 VHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred eecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999999999999999999987654
No 308
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.64 E-value=3.4e-15 Score=159.24 Aligned_cols=147 Identities=21% Similarity=0.301 Sum_probs=101.1
Q ss_pred hCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHH
Q 005274 181 LGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDE 260 (704)
Q Consensus 181 lG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde 260 (704)
++..++++|..+ +.||.|++|.||+|+...+|+.|+||+........ ..
T Consensus 15 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------~~ 63 (313)
T cd06633 15 YKDDPEEIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT-----------------------------NE 63 (313)
T ss_pred ccCCHHHHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-----------------------------hH
Confidence 456778887766 45999999999999998899999999875321100 01
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHH
Q 005274 261 WASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVY 330 (704)
Q Consensus 261 ~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~ 330 (704)
....+..|+..++..+| +++.-..-+.......+++|||+.| .+.+.... ...-.++.
T Consensus 64 ~~~~~~~E~~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~ 131 (313)
T cd06633 64 KWQDIIKEVKFLQQLKH-----------PNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGAL 131 (313)
T ss_pred HHHHHHHHHHHHHhCCC-----------CCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 11234445554444433 3322222233345668899999976 44443211 11225677
Q ss_pred HHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
.++.+||+.|++|+|++|+||+++.+|.++++|||++...
T Consensus 132 ~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 132 QGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 8899999999999999999999999999999999998643
No 309
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.64 E-value=3.7e-15 Score=152.78 Aligned_cols=137 Identities=13% Similarity=0.143 Sum_probs=98.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||.++...+|+.|++|........ .+-...+.+|++.++.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS------------------------------EKERRDALNEIVILSL 55 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccc------------------------------hhHHHHHHHHHHHHHh
Confidence 5799999999999999999999999986421100 0111223445444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----h-------HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----L-------IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----l-------~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-+.......+++|||++|++|.+..... + .-.++..++.++|+.|++|
T Consensus 56 ~~h-----------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h 124 (256)
T cd08221 56 LQH-----------PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILH 124 (256)
T ss_pred CCC-----------CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 322 34333232344567789999999999998865321 1 1245667889999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|+||+++.++.++++|||.+.....
T Consensus 125 ~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 125 RDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred cCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 99999999999999999999999876543
No 310
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.64 E-value=2e-15 Score=154.34 Aligned_cols=237 Identities=14% Similarity=0.162 Sum_probs=146.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|....+++.||||+....... .+....+..|+..++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT------------------------------KDERLAAQNECQVLKL 55 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc------------------------------cHHHHHHHHHHHHHhh
Confidence 5799999999999999889999999987532100 0112345556666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----h-------HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----L-------IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----l-------~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++....-........++||||++|++|.++.... + .-.++..++.++|+.|++|
T Consensus 56 ~~~-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h 124 (256)
T cd08220 56 LSH-----------PNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILH 124 (256)
T ss_pred CCC-----------CchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 544 22222222223456688999999999998775321 1 1146677889999999999
Q ss_pred cCCCCCcEEEecCC-cEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDG-KLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 344 ~DphPgNILv~~dG-~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
+|++|+||+++.++ .++++|||++..+....... ....+.++++|+.-.. .
T Consensus 125 ~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~-----------------~~~~~~~y~aPE~~~~-----------~ 176 (256)
T cd08220 125 RDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY-----------------TVVGTPCYISPELCEG-----------K 176 (256)
T ss_pred CCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc-----------------ccccCCcccCchhccC-----------C
Confidence 99999999998654 57999999998765332100 0112334555553210 1
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSL 502 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL 502 (704)
..+...|.|++|.++.++... ..++.... ........ ..+ .... +....++++++++
T Consensus 177 ~~~~~~Dv~slG~~l~~l~~~--~~~~~~~~-~~~~~~~~--~~~-------~~~~-----------~~~~~~~~l~~li 233 (256)
T cd08220 177 PYNQKSDIWALGCVLYELASL--KRAFEAAN-LPALVLKI--MSG-------TFAP-----------ISDRYSPDLRQLI 233 (256)
T ss_pred CCCcccchHHHHHHHHHHHhC--CCCcccCc-hHHHHHHH--Hhc-------CCCC-----------CCCCcCHHHHHHH
Confidence 123345667777776665542 11221111 00000000 000 0000 1124578899999
Q ss_pred HHhhhccccCCCCHHHHHhhh
Q 005274 503 VALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 503 ~~lL~~d~~~R~~rle~Ll~~ 523 (704)
.+++..||..|++..+.|.|+
T Consensus 234 ~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 234 LSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred HHHccCChhhCCCHHHHhhCC
Confidence 999999999999999888775
No 311
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.64 E-value=8.4e-15 Score=151.16 Aligned_cols=132 Identities=16% Similarity=0.171 Sum_probs=93.1
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||.|+.+ ++..||||..+.+... ...+.+|+..+..
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~---------------------------------~~~~~~e~~~l~~ 55 (256)
T cd05113 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---------------------------------EDEFIEEAKVMMK 55 (256)
T ss_pred eEecCcccceEEEEEec-CCCcEEEEEcCCCccc---------------------------------HHHHHHHHHHHhc
Confidence 46999999999999886 5667999987643110 0123334444433
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| +++.-..-+.......+++|||+.|+.|.+.... . ..-.++..++.+||+.|++|+
T Consensus 56 l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 124 (256)
T cd05113 56 LSH-----------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHR 124 (256)
T ss_pred CCC-----------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 332 3332222223344567999999999988876431 1 122567788999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.+++++++|||++..+.
T Consensus 125 dl~p~nili~~~~~~kl~d~g~~~~~~ 151 (256)
T cd05113 125 DLAARNCLVDDQGCVKVSDFGLSRYVL 151 (256)
T ss_pred ccCcceEEEcCCCCEEECCCccceecC
Confidence 999999999999999999999987653
No 312
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=7.8e-15 Score=146.14 Aligned_cols=138 Identities=23% Similarity=0.274 Sum_probs=99.4
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|++|.||+|.. +|..|+||+..+.....-..|. . --..++.+|+..++.+.
T Consensus 2 ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~----------------------~--~~~~~~~~E~~~l~~l~ 55 (199)
T TIGR03724 2 IAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDE----------------------R--IRRERTRNEARLLSRAR 55 (199)
T ss_pred CCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHH----------------------H--HHHHHHHHHHHHHHHHH
Confidence 79999999999995 7899999996543211000000 0 00123334444444333
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--hHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--LIEVGVYCSFNQLLEKGFYHADPHPGNLFRS 354 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--l~e~~v~~~L~qLh~~G~~H~DphPgNILv~ 354 (704)
+ .++.+|.++.......+++|||++|.++.+..... -.-.++..++.++|+.|++|+|+||+||+++
T Consensus 56 ~-----------~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~ 124 (199)
T TIGR03724 56 K-----------AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR 124 (199)
T ss_pred H-----------CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE
Confidence 2 45778888877777889999999999998875431 2335667789999999999999999999998
Q ss_pred cCCcEEEEecCCccccCh
Q 005274 355 YDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 355 ~dG~l~liDFGl~~~l~~ 372 (704)
+++++++|||+++....
T Consensus 125 -~~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 125 -DDKLYLIDFGLGKYSDE 141 (199)
T ss_pred -CCcEEEEECCCCcCCCc
Confidence 89999999999886543
No 313
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.64 E-value=9.4e-15 Score=149.81 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=94.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|+||+|... ++..+|||+.+.+... ...+..|+..++.
T Consensus 10 ~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---------------------------------~~~~~~e~~~l~~ 55 (256)
T cd05112 10 QEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---------------------------------EEDFIEEAQVMMK 55 (256)
T ss_pred eeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---------------------------------HHHHHHHHHHHHh
Confidence 57999999999999986 6889999987643211 0122334444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
..| +++.-..-+.+..+..+++|||++|+.|.+.... . ..-.++..++.+||+.|++|+
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~ 124 (256)
T cd05112 56 LSH-----------PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHR 124 (256)
T ss_pred CCC-----------CCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 332 3333222234445678999999999998876421 1 111455677899999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+||+||+++.++.++++|||++....
T Consensus 125 dl~p~ni~i~~~~~~~l~d~g~~~~~~ 151 (256)
T cd05112 125 DLAARNCLVGENQVVKVSDFGMTRFVL 151 (256)
T ss_pred ccccceEEEcCCCeEEECCCcceeecc
Confidence 999999999999999999999987653
No 314
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.64 E-value=1.7e-15 Score=159.51 Aligned_cols=142 Identities=18% Similarity=0.274 Sum_probs=93.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+....... +.+.....+|+..++.
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 67 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK------------------------------EGFPITALREIKILQL 67 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc------------------------------CCchhHHHHHHHHHHh
Confidence 5799999999999999989999999987532110 0111223345555555
Q ss_pred HhhHHHHHHHhcCCccee-ece-eeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPE-MYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~-v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
.+|. .+.+.++ +. .+. .+....+..++||||+.+ .+.+.... ...-.++..++.+||+.|++
T Consensus 68 l~h~-~iv~~~~----~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 141 (310)
T cd07865 68 LKHE-NVVNLIE----ICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKIL 141 (310)
T ss_pred CCCC-CccceEE----EEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5441 1111110 00 000 011223456999999976 55443211 11225678889999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+|++|+||+++.+|.++++|||++..+..
T Consensus 142 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 142 HRDMKAANILITKDGILKLADFGLARAFSL 171 (310)
T ss_pred ccCCCHHHEEECCCCcEEECcCCCcccccC
Confidence 999999999999999999999999876543
No 315
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.64 E-value=6.6e-15 Score=153.71 Aligned_cols=135 Identities=18% Similarity=0.247 Sum_probs=94.9
Q ss_pred ccccccccceEEEEEE----ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARL----RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~l----k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|+||.||+|+. ..+|+.||||+.+..... ..+.+.+|+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~--------------------------------~~~~~~~e~~ 57 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAE--------------------------------HLRDFEREIE 57 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHH--------------------------------HHHHHHHHHH
Confidence 5799999999999985 347899999997643211 1123344544
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceee-e-ecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMY-V-EQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~-~-e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~ 338 (704)
.+...+| +++.-..-+ . ......++||||++|++|.++... ...-.++..++.+||+
T Consensus 58 ~l~~l~h-----------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~ 126 (284)
T cd05081 58 ILKSLQH-----------DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS 126 (284)
T ss_pred HHHhCCC-----------CCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4443333 333221111 1 112346899999999999887531 1122567788999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.|++|+|+||+||+++.+++++++|||++..+..
T Consensus 127 ~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 127 KRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred CCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 9999999999999999999999999999887643
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.63 E-value=7.1e-15 Score=152.70 Aligned_cols=135 Identities=17% Similarity=0.235 Sum_probs=90.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|+.+.+|+.||||+.+....... + ....+|+..+..
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-----------------------------~--~~~~~e~~~l~~ 53 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-----------------------------Q--VNNLREIQALRR 53 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch-----------------------------h--hhHHHHHHHHhh
Confidence 469999999999999998999999998764321100 0 011223332222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.. +++++.-..-+.... +..+++|||++|..+..+... ...-.++..++.+||+.|++|
T Consensus 54 l~----------~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H 123 (282)
T cd07831 54 LS----------PHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFH 123 (282)
T ss_pred cC----------CCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 22 123332222222233 678999999987433332211 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|++|.||+++. |.++++|||++..+.
T Consensus 124 ~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 124 RDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred cccCHHHEEEcC-CCeEEEecccccccc
Confidence 999999999999 999999999987664
No 317
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.63 E-value=4.2e-15 Score=159.45 Aligned_cols=131 Identities=17% Similarity=0.233 Sum_probs=92.4
Q ss_pred cccc--ccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 197 VAAA--SLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 197 IgsG--S~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
||.| ++|+||+|+++.+|+.||||+....... ++..+.+.+|+..++.
T Consensus 6 ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~------------------------------~~~~~~~~~e~~~~~~ 55 (328)
T cd08226 6 IGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT------------------------------EEHLKALQNEVVLSHF 55 (328)
T ss_pred hCCcccCceeEEEEEEcCCCcEEEEEEeccccCC------------------------------HHHHHHHHHHHHHHHh
Confidence 4555 9999999999889999999997643110 0111233344333222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~G~~H 343 (704)
+. +++|.-..-+.......+++|||+.|+++.++.... ..-.++..+|.++|+.|++|
T Consensus 56 ----------l~-h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH 124 (328)
T cd08226 56 ----------FR-HPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIH 124 (328)
T ss_pred ----------CC-CCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 22 245433333444566789999999999998875421 12256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCcc
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMG 368 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~ 368 (704)
+|+||+||+++.+|.+++.|||.+.
T Consensus 125 rDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 125 RNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred CCCCHHHEEEeCCCcEEEechHHHh
Confidence 9999999999999999999998643
No 318
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.63 E-value=4e-16 Score=159.33 Aligned_cols=166 Identities=21% Similarity=0.314 Sum_probs=104.1
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
-+|+|+-|+|++++.+.+|...|||.++..-.. |-.+++...+|..-..
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-------------------------------ee~kRILmDldvv~~s 147 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-------------------------------EENKRILMDLDVVLKS 147 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCH-------------------------------HHHHHHHHhhhHHhhc
Confidence 489999999999999999999999998743211 1123344444443322
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---hhhHH-------HHHHHHHHHHH-HCCcccc
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---LYLIE-------VGVYCSFNQLL-EKGFYHA 344 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---~~l~e-------~~v~~~L~qLh-~~G~~H~ 344 (704)
.. .+.|+--.-|+-..+..++.||.+ +.-...+.. ..+.| +.+..+|.||- .+|++||
T Consensus 148 ~d----------cpyIV~c~GyFi~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHR 216 (391)
T KOG0983|consen 148 HD----------CPYIVQCFGYFITNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHR 216 (391)
T ss_pred cC----------CCeeeeeeeEEeeCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeec
Confidence 21 233333333444455666777776 222222221 12222 34456677775 5899999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhH---HHHHHHHHHH-----hhccChhHHHHHHHhcCCC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEEL---REGFIEACLH-----LVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~---r~~~~~~~~~-----l~~~d~~~la~d~~slG~l 403 (704)
|.||.|||++..|.+|+||||.++++.+.. |.+-+.++++ .-+.+-|.+..|+|++|+.
T Consensus 217 DvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGIT 283 (391)
T KOG0983|consen 217 DVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGIT 283 (391)
T ss_pred ccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccc
Confidence 999999999999999999999999886543 3222222222 1124455677788888864
No 319
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.63 E-value=6.8e-15 Score=152.14 Aligned_cols=135 Identities=18% Similarity=0.250 Sum_probs=95.7
Q ss_pred ccccccccceEEEEEEccC---CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS---GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t---G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||+|+||.||+|+++.+ ...||||+.+++... +....+..|+..
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~-------------------------------~~~~~~~~e~~~ 58 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSD-------------------------------KQRLDFLTEASI 58 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCCh-------------------------------HHHHHHHHHHHH
Confidence 5799999999999998644 457999998754321 111223344444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---h-------hHHHHHHHHHHHHHHCCc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---Y-------LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~-------l~e~~v~~~L~qLh~~G~ 341 (704)
+...+| +++.-..-+.......+++|||++|++|.++... . -.-.++..++.+||+.|+
T Consensus 59 l~~l~h-----------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 127 (266)
T cd05033 59 MGQFDH-----------PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127 (266)
T ss_pred HHhCCC-----------CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 443333 3322211223345567899999999999887432 1 112566778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+|+||.||+++.++.++++|||++..+.
T Consensus 128 ~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred ccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 999999999999999999999999998764
No 320
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.63 E-value=3.9e-15 Score=154.45 Aligned_cols=135 Identities=19% Similarity=0.177 Sum_probs=93.6
Q ss_pred ccccccccceEEEEEEccC-----CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-----GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-----G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|..+.. +..||+|....+... .....+.+|+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~-------------------------------~~~~~~~~e~ 60 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM-------------------------------RERIEFLNEA 60 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-------------------------------HHHHHHHHHH
Confidence 5799999999999998643 378999997643210 0011222333
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------------hhHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------------YLIEVGVY 330 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------------~l~e~~v~ 330 (704)
..+.... ++++.--.-+.......+++|||++|++|.++... ...-.++.
T Consensus 61 ~~l~~~~-----------~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 129 (277)
T cd05032 61 SVMKEFN-----------CHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIA 129 (277)
T ss_pred HHHHhCC-----------CCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHH
Confidence 3332222 23333222233445678999999999999876431 01124677
Q ss_pred HHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 331 CSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 331 ~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++.++|+.|++|+|++|+||+++.+|.++++|||+++.+.
T Consensus 130 ~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05032 130 DGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY 170 (277)
T ss_pred HHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhc
Confidence 78999999999999999999999999999999999987654
No 321
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.63 E-value=5e-15 Score=155.12 Aligned_cols=134 Identities=21% Similarity=0.248 Sum_probs=96.1
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
..||.|++|.||+|+.+. ++..||||+.+.+... +....+.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~ei 59 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA-------------------------------DMQADFQREA 59 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCH-------------------------------HHHHHHHHHH
Confidence 579999999999999742 6789999997643211 1123344555
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------------------------
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------------------------- 322 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------------------------- 322 (704)
..+....| +++.-..-+.......+++|||++|++|.++...
T Consensus 60 ~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 128 (288)
T cd05050 60 ALMAEFDH-----------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLS 128 (288)
T ss_pred HHHHhcCC-----------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccC
Confidence 55555443 3332222233344567999999999999877531
Q ss_pred ----hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 323 ----YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 323 ----~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
...-.++..++.++|+.|++|+|+||.||+++.+|.++++|||++..+
T Consensus 129 ~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 180 (288)
T cd05050 129 CTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 180 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceec
Confidence 012256667889999999999999999999999999999999998754
No 322
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.63 E-value=5.1e-15 Score=155.32 Aligned_cols=245 Identities=16% Similarity=0.142 Sum_probs=143.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||+|+..+.-. ....+.+|++.++.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---------------------------------~~~~~~~e~~~l~~ 74 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---------------------------------VDEEIEAEYNILQS 74 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc---------------------------------HHHHHHHHHHHHHH
Confidence 579999999999999998999999999864210 01122333333322
Q ss_pred HhhHHHHHHHhcCCcceeece-eeee----cccceeEEEEeccCCChhhHHhh------h-------hHHHHHHHHHHHH
Q 005274 275 AKNGLKFRQLYGGIQDVLIPE-MYVE----QTTRKVLIMEWVEGQKLSEVKDL------Y-------LIEVGVYCSFNQL 336 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~-v~~e----~ss~~vLVmE~i~G~~L~d~~~~------~-------l~e~~v~~~L~qL 336 (704)
. .+++++.-.. .+.. ..+..++||||++|++|.++... . ..-.++..++.++
T Consensus 75 l----------~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 144 (291)
T cd06639 75 L----------PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144 (291)
T ss_pred h----------cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 1223332221 2211 12457899999999999876431 1 1224667789999
Q ss_pred HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 337 LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|+.|++|+|+||+||+++.++.++++|||.+..+........ .......+.+|+.-...
T Consensus 145 H~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~----------------~~~~~~~y~aPE~~~~~----- 203 (291)
T cd06639 145 HNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRN----------------TSVGTPFWMAPEVIACE----- 203 (291)
T ss_pred HhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccccccc----------------CccCCccccChhhhcCC-----
Confidence 999999999999999999999999999999876543221000 00112334444421000
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCCh
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
.......+...|.|++|.++.++... +.++.--.....+ ..+.....|.+.. ....++
T Consensus 204 -~~~~~~~~~~~Di~slGvi~~el~~g--~~p~~~~~~~~~~-------~~~~~~~~~~~~~------------~~~~~~ 261 (291)
T cd06639 204 -QQYDYSYDARCDVWSLGITAIELGDG--DPPLFDMHPVKTL-------FKIPRNPPPTLLH------------PEKWCR 261 (291)
T ss_pred -CCcccccCCccchHHHHHHHHHHhhC--CCCCCCCcHHHHH-------HHHhcCCCCCCCc------------ccccCH
Confidence 00000123345677777777666542 1222111111111 1111111111100 123567
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.+++++.+++.+||..|++.-+.+.|+.+
T Consensus 262 ~l~~li~~~l~~~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 262 SFNHFISQCLIKDFEARPSVTHLLEHPFI 290 (291)
T ss_pred HHHHHHHHHhhcChhhCcCHHHHhcCccc
Confidence 89999999999999999999888888653
No 323
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.63 E-value=6.8e-15 Score=163.50 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.++..++.+||+.|++|+|+||.|||++.++.++++|||+++.+.
T Consensus 246 ~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~ 290 (401)
T cd05107 246 YQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIM 290 (401)
T ss_pred HHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecc
Confidence 366778999999999999999999999999999999999987653
No 324
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.63 E-value=3e-15 Score=153.17 Aligned_cols=239 Identities=17% Similarity=0.206 Sum_probs=142.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|+|++|.||+|....+|+.||+|+....... ..-.+.+..|+..++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT------------------------------EKEKQQLVSEVNILRE 55 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCC------------------------------HHHHHHHHHHHHHHHh
Confidence 5799999999999999989999999987532111 0112334455555555
Q ss_pred HhhHHHHHHHhcCCcceeec-eeee-ecccceeEEEEeccCCChhhHHhh------h-------hHHHHHHHHHHHHH--
Q 005274 275 AKNGLKFRQLYGGIQDVLIP-EMYV-EQTTRKVLIMEWVEGQKLSEVKDL------Y-------LIEVGVYCSFNQLL-- 337 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP-~v~~-e~ss~~vLVmE~i~G~~L~d~~~~------~-------l~e~~v~~~L~qLh-- 337 (704)
.+| +++.-. ..+. ......+++|||++|++|.++... . ..-.++..++.++|
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 124 (265)
T cd08217 56 LKH-----------PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNR 124 (265)
T ss_pred cCC-----------CccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 544 222111 1111 123456899999999999876432 1 11256777899999
Q ss_pred ---HCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHH
Q 005274 338 ---EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTK 414 (704)
Q Consensus 338 ---~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~ 414 (704)
+.|++|+|+||+||+++.+|.++++|||++..+....... . ....+..+++|+.-..
T Consensus 125 ~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~----------~------~~~~~~~~~~pE~~~~---- 184 (265)
T cd08217 125 SDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA----------K------TYVGTPYYMSPEQLNH---- 184 (265)
T ss_pred ccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccc----------c------ccccCCCccChhhhcC----
Confidence 8999999999999999999999999999988765432100 0 0001223333331100
Q ss_pred HHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCC
Q 005274 415 ALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDS 494 (704)
Q Consensus 415 ~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~ 494 (704)
...+...|.|++|.++.++.... .++.... ...+.+.+ .. ..+.. +....
T Consensus 185 -------~~~~~~~Dv~slG~il~~l~~g~--~p~~~~~-~~~~~~~~------~~---~~~~~-----------~~~~~ 234 (265)
T cd08217 185 -------MSYDEKSDIWSLGCLIYELCALS--PPFTARN-QLQLASKI------KE---GKFRR-----------IPYRY 234 (265)
T ss_pred -------CCCCchhHHHHHHHHHHHHHHCC--CcccCcC-HHHHHHHH------hc---CCCCC-----------Ccccc
Confidence 01122234455555555544321 1222211 11111111 11 11111 11245
Q ss_pred ChHHHHHHHHhhhccccCCCCHHHHHhhhh
Q 005274 495 SPQLKSSLVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 495 sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
++++.+++++||..+|..|.+..+-|.|+.
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 788999999999999999999988777753
No 325
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.63 E-value=3.7e-15 Score=153.36 Aligned_cols=134 Identities=18% Similarity=0.117 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEccCC---cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSG---RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG---~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
-||.|++|+||+|+...++ ..||+|+.+..... ...+.+.+|+..+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~e~~~l 50 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-------------------------------AGKKEFLREASVM 50 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch-------------------------------HHHHHHHHHHHHH
Confidence 4899999999999876544 78999998754211 1112344455554
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
+...| +++.-..-+ ......+++|||++|++|.++... ...-.++..++.+||..|++|
T Consensus 51 ~~l~h-----------~~iv~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 51 AQLDH-----------PCIVRLIGV-CKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred HhcCC-----------CCeeeEEEE-EcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 44433 332111112 224567899999999999886532 112256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+||.||+++.+|.++++|||++..+..
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~ 147 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGA 147 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeec
Confidence 99999999999999999999999886643
No 326
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.63 E-value=5.9e-15 Score=143.37 Aligned_cols=135 Identities=23% Similarity=0.399 Sum_probs=100.5
Q ss_pred ccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHh
Q 005274 197 VAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAK 276 (704)
Q Consensus 197 IgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~ 276 (704)
||+|++|+||+++...+|++++||+.+++.... ....+.+|+..++..+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------------------------------~~~~~~~e~~~~~~l~ 49 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-------------------------------LLEELLREIEILKKLN 49 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-------------------------------HHHHHHHHHHHHHhcC
Confidence 689999999999997779999999988653221 1234455555555444
Q ss_pred hHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHHCCccccCC
Q 005274 277 NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 277 n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
+ +++.-+..+....+..+++|||++|.+|.++.... -.-.++..++.++|+.|++|+|+
T Consensus 50 ~-----------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl 118 (215)
T cd00180 50 H-----------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDL 118 (215)
T ss_pred C-----------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 3 33333333444456889999999999998875421 11246667889999999999999
Q ss_pred CCCcEEEec-CCcEEEEecCCccccChh
Q 005274 347 HPGNLFRSY-DGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 347 hPgNILv~~-dG~l~liDFGl~~~l~~~ 373 (704)
+|+||+++. +++++++|||.+......
T Consensus 119 ~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 119 KPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred CHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 999999999 899999999999876543
No 327
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.63 E-value=8.9e-15 Score=155.17 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=95.3
Q ss_pred ccccccccceEEEEEEcc-------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
+.||+|+||.||+|+... ++..||+|+.++.... +-...+..
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~ 72 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE-------------------------------KDLSDLIS 72 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh-------------------------------HHHHHHHH
Confidence 579999999999998642 3457999998764211 00122334
Q ss_pred HHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------h-----
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------L----- 324 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------l----- 324 (704)
|+..+... ..++++.-...+.......+++|||++|++|.++.... +
T Consensus 73 e~~~l~~l----------~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~ 142 (307)
T cd05098 73 EMEMMKMI----------GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDL 142 (307)
T ss_pred HHHHHHHh----------cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHH
Confidence 44433332 12244433333344556789999999999998775320 1
Q ss_pred --HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 325 --IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 325 --~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.-.++..++.++|+.|++|+|+||+||+++.++.++++|||.+..+.
T Consensus 143 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~ 191 (307)
T cd05098 143 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 191 (307)
T ss_pred HHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccc
Confidence 12566778999999999999999999999999999999999987654
No 328
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.63 E-value=8.6e-15 Score=155.96 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=95.4
Q ss_pred ccccccccceEEEEEEcc-------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
+.||.|++|.||+|+... ++..||+|+.+..... +....+..
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~ 66 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD-------------------------------KDLADLIS 66 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh-------------------------------HHHHHHHH
Confidence 679999999999998632 3457999997743211 00112334
Q ss_pred HHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------------
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------ 323 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------ 323 (704)
|+..++.. .++++|.-..-+....+..+++|||++|++|.++....
T Consensus 67 E~~~l~~l----------~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (314)
T cd05099 67 EMELMKLI----------GKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL 136 (314)
T ss_pred HHHHHHhc----------cCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHH
Confidence 44433332 22344433222333455688999999999998765320
Q ss_pred -hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 324 -LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 324 -l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
..-.++..++.++|+.|++|+|+||+||+++.+|+++++|||+++.+..
T Consensus 137 ~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 137 VSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHD 186 (314)
T ss_pred HHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccc
Confidence 1124677889999999999999999999999999999999999987643
No 329
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.63 E-value=3.4e-15 Score=155.84 Aligned_cols=136 Identities=15% Similarity=0.192 Sum_probs=94.4
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|+... ++..||||+.+..... .....+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~ 59 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG-------------------------------PLREEFKHEA 59 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH-------------------------------HHHHHHHHHH
Confidence 468999999999999753 3578999998643211 1122333444
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------------------hh
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------------------YL 324 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------------------~l 324 (704)
..+...+| +++.-..-+.......++++||++++.|.++... ..
T Consensus 60 ~~~~~l~h-----------~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (283)
T cd05091 60 MMRSRLQH-----------PNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVH 128 (283)
T ss_pred HHHhcCCC-----------CCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHH
Confidence 44333332 3332222223334567899999999988776421 01
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.-.++..++.++|+.|++|+|+||.||+++.++.++++|||+++.+..
T Consensus 129 ~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 129 IVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYA 176 (283)
T ss_pred HHHHHHHHHHHHHHcCccccccchhheEecCCCceEeccccccccccc
Confidence 124677889999999999999999999999999999999999886643
No 330
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.63 E-value=6.7e-15 Score=154.52 Aligned_cols=135 Identities=18% Similarity=0.191 Sum_probs=95.5
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|+||.||+|+... ++..|++|+...+... .....+..|+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~~~~~~E~ 54 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS-------------------------------SELRDLLSEF 54 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH-------------------------------HHHHHHHHHH
Confidence 569999999999998742 3367999987643211 0112344555
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------------------------
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------------------------- 322 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------------------------- 322 (704)
+.+....| +++.-..-.....+..+++|||+.|+.|.++...
T Consensus 55 ~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (290)
T cd05045 55 NLLKQVNH-----------PHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERA 123 (290)
T ss_pred HHHhhCCC-----------CCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccc
Confidence 55554433 3432222233445678999999999999876321
Q ss_pred ------hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 323 ------YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 323 ------~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
...-.++..++.+||+.|++|+|+||.||+++.++.++++|||++..+.
T Consensus 124 l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~ 178 (290)
T cd05045 124 LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY 178 (290)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEecccccccccc
Confidence 0122567788999999999999999999999999999999999987653
No 331
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.63 E-value=7.7e-15 Score=152.18 Aligned_cols=133 Identities=16% Similarity=0.136 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEc--cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLR--QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk--~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.||+|+||.||+|+.. .++..||+|..+..... .....+.+|+..++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~~~~~~E~~~l~ 50 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-------------------------------QEQMKFLEEAQPYR 50 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-------------------------------HHHHHHHHHHHHHH
Confidence 5899999999999864 24567999987643210 01112334444443
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------------hhHHHHHHHHHHHHHHC
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------------~l~e~~v~~~L~qLh~~ 339 (704)
..+| +++.--.-+....+..++||||++|++|.++... ...-.++..++.++|+.
T Consensus 51 ~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 51 SLQH-----------SNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred hCCC-----------CCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 3333 4432212233345567899999999999876431 01124677789999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|++|+|+||.||+++.++.++++|||++...
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999999999999999999998643
No 332
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.63 E-value=5.7e-15 Score=154.84 Aligned_cols=140 Identities=18% Similarity=0.261 Sum_probs=97.7
Q ss_pred ccccccccceEEEEEEc---cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR---QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk---~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|++|.||+|+.. .+|+.||+|+.+...... .....+.+.+|+.+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~----------------------------~~~~~~~~~~e~~~ 57 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ----------------------------KAKTTEHTRTERQV 57 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh----------------------------cchHHHHHHHHHHH
Confidence 46999999999999974 378999999976321100 00112334455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
+....+ ++++.-.....+.....+++|||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 58 l~~l~~----------~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~ 127 (290)
T cd05613 58 LEHIRQ----------SPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGII 127 (290)
T ss_pred HHhccc----------CCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 544432 23332222233345567899999999999876431 11224677789999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+|++|.||+++.+|+++++|||++..+..
T Consensus 128 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 128 YRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred ccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 999999999999999999999999887643
No 333
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.62 E-value=1.1e-14 Score=156.59 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=95.4
Q ss_pred ccccccccceEEEEEEccC-------CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-------GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-------G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
++||.|+||+||+|+.... +..||+|+.+..... +....+.+
T Consensus 18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~ 66 (334)
T cd05100 18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD-------------------------------KDLSDLVS 66 (334)
T ss_pred ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH-------------------------------HHHHHHHH
Confidence 5899999999999986422 237999987633211 11233445
Q ss_pred HHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------------
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------ 323 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------ 323 (704)
|+.++.... .++++.-..-+.......+++|||+.|+.|.++....
T Consensus 67 E~~~l~~l~----------~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (334)
T cd05100 67 EMEMMKMIG----------KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDL 136 (334)
T ss_pred HHHHHHhhc----------CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHH
Confidence 555544432 2244333222333445678999999999998764310
Q ss_pred -hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 324 -LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 324 -l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.+-.++..++.+||+.|++|+|++|.||+++.++.++++|||+++.+..
T Consensus 137 ~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 186 (334)
T cd05100 137 VSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHN 186 (334)
T ss_pred HHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceeccc
Confidence 0224677889999999999999999999999999999999999876543
No 334
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.62 E-value=1e-14 Score=154.86 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=97.5
Q ss_pred CccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
.+.||.|++|+||+|+.. .++..||||+.+..... +....+.+|
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------~~~~~~~~E 88 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS-------------------------------SEREALMSE 88 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh-------------------------------HHHHHHHHH
Confidence 357999999999999852 35668999987643211 111234455
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHH
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh 337 (704)
+..++... +++++.--.-+.......+++|||+.|++|.++... .....++..++.++|
T Consensus 89 ~~~l~~l~----------~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH 158 (302)
T cd05055 89 LKIMSHLG----------NHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA 158 (302)
T ss_pred HHHHHhcc----------CCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55554442 223333222234455678999999999999876432 112256778899999
Q ss_pred HCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 338 EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+.|++|+|+||+||+++.++.++++|||++..+..
T Consensus 159 ~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 159 SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred HCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 99999999999999999999999999999876543
No 335
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.62 E-value=1.8e-15 Score=161.73 Aligned_cols=142 Identities=20% Similarity=0.248 Sum_probs=98.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+...+|+.||||+..+.... ....+.+.+|+..++.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD------------------------------LIDAKRILREIKLLRH 55 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeecccccc------------------------------chhhhhHHHHHHHHHh
Confidence 5799999999999999888999999988753211 0122445566666666
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| ..+.+.++.. ..... ...+..+++|||+.+ .|.+.... ...-.++..++.+||+.|++|+|
T Consensus 56 l~~-~~i~~~~~~~----~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~d 128 (330)
T cd07834 56 LRH-ENIIGLLDIL----RPPSP-EDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRD 128 (330)
T ss_pred cCC-cchhhhhhhh----cccCc-ccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 654 2332222211 00000 112357899999975 56554321 12335777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
+||+||+++.+|+++++|||++......
T Consensus 129 lkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 129 LKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred CCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999999999999999999999876543
No 336
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.62 E-value=1e-14 Score=153.23 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=95.0
Q ss_pred ccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||++... .++..||||..+.... .....+.+|+
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~--------------------------------~~~~~~~~e~ 58 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD--------------------------------NARKDFHREA 58 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH--------------------------------HHHHHHHHHH
Confidence 56999999999999863 2456799998652110 1122344555
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------------------hhHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------------------YLIEV 327 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------------------~l~e~ 327 (704)
..+...+| +++....-+.......+++|||++|++|.++... ...-.
T Consensus 59 ~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 127 (288)
T cd05093 59 ELLTNLQH-----------EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ 127 (288)
T ss_pred HHHHhCCC-----------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHH
Confidence 55444433 3333333344456778999999999999776421 01225
Q ss_pred HHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 328 GVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 328 ~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++..++.++|..|++|+|++|.||+++.+|.++++|||++..+.
T Consensus 128 ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 171 (288)
T cd05093 128 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 171 (288)
T ss_pred HHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCcccccc
Confidence 67788999999999999999999999999999999999987653
No 337
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.62 E-value=8.1e-15 Score=152.12 Aligned_cols=133 Identities=15% Similarity=0.217 Sum_probs=92.6
Q ss_pred ccccccccceEEEEEEccC------------CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS------------GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWA 262 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t------------G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~ 262 (704)
+.||+|++|+||+|+...+ +..|+||+..+... ...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--------------------------------~~~ 48 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR--------------------------------DIS 48 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh--------------------------------hHH
Confidence 3589999999999986422 23689998765321 112
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHH
Q 005274 263 SSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCS 332 (704)
Q Consensus 263 ~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~ 332 (704)
..+.+|+..+...+| +++.-..-+.......+++|||++|+.+..+... .-...++..+
T Consensus 49 ~~~~~~~~~l~~l~h-----------p~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~ 117 (262)
T cd05077 49 LAFFETASMMRQVSH-----------KHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASA 117 (262)
T ss_pred HHHHHHHHHHHhCCC-----------CCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 234444444444433 4544333333445678999999999998776431 1123577888
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCc-------EEEEecCCcccc
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGK-------LAYIDFGMMGEF 370 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~-------l~liDFGl~~~l 370 (704)
+.++|+.|++|+|+||.||+++.+|. ++++|||++..+
T Consensus 118 l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~ 162 (262)
T cd05077 118 LSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV 162 (262)
T ss_pred HHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence 99999999999999999999987664 899999987654
No 338
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.62 E-value=6.8e-15 Score=154.09 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=96.6
Q ss_pred ccccccccceEEEEEEc---cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR---QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk---~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|++|.||+|+.. .+|+.||||+.+..... . -....+.+..|+..
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~---~-------------------------~~~~~~~~~~E~~~ 57 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV---Q-------------------------KAKTAEHTRTERQV 57 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH---h-------------------------hhhHHHHHHHHHHH
Confidence 57999999999999863 36789999997632100 0 00122344556665
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
+....+...+...+ .........++||||++|++|.+.... ...-.++..++.+||+.|++
T Consensus 58 l~~~~~~~~i~~~~----------~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~ 127 (288)
T cd05583 58 LEAVRRCPFLVTLH----------YAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGII 127 (288)
T ss_pred HHhccCCcchhhhh----------eeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 55554333333222 223345567899999999988775321 11124677789999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|+|+||.||+++.++.++++|||++..+.
T Consensus 128 H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 128 YRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred ccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999999999999987654
No 339
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.62 E-value=5.2e-15 Score=154.72 Aligned_cols=82 Identities=13% Similarity=0.128 Sum_probs=61.0
Q ss_pred cceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCC-
Q 005274 289 QDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDG- 357 (704)
Q Consensus 289 ~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG- 357 (704)
+++.-..-+....+..++||||++|+.|..+... ...-.++..++.+||+.|++|+|+||.||+++.+|
T Consensus 76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence 4443333344445678999999999999876431 11225777889999999999999999999997654
Q ss_pred ------cEEEEecCCcccc
Q 005274 358 ------KLAYIDFGMMGEF 370 (704)
Q Consensus 358 ------~l~liDFGl~~~l 370 (704)
.++++|||+....
T Consensus 156 ~~~~~~~~kl~d~g~~~~~ 174 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTA 174 (274)
T ss_pred ccCccceeeecCCcccccc
Confidence 4899999987543
No 340
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.62 E-value=1.9e-14 Score=152.60 Aligned_cols=250 Identities=19% Similarity=0.157 Sum_probs=150.2
Q ss_pred CChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHH
Q 005274 183 LPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWA 262 (704)
Q Consensus 183 ~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~ 262 (704)
..+++.|... +.||+|++|.||+|+...+|+.||+|+....... ..+..
T Consensus 11 ~~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-----------------------------~~~~~ 59 (307)
T cd06607 11 DDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-----------------------------SNEKW 59 (307)
T ss_pred CCcchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-----------------------------cHHHH
Confidence 3455556555 5699999999999999889999999987532110 01112
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHH
Q 005274 263 SSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCS 332 (704)
Q Consensus 263 ~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~ 332 (704)
..+.+|+.+++..+| +++.-..-+.......++||||++|. +.+.... ...-.++..+
T Consensus 60 ~~~~~Ei~~l~~l~h-----------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~ 127 (307)
T cd06607 60 QDIIKEVRFLQQLRH-----------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQG 127 (307)
T ss_pred HHHHHHHHHHHhCCC-----------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence 334556665555444 44443333344456789999999874 3333211 1122567788
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHH
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAV 412 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i 412 (704)
+.+||+.|++|+|++|+||+++.+|.++++|||++........ .....++++|+.-...
T Consensus 128 L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~--------------------~~~~~~y~aPE~~~~~- 186 (307)
T cd06607 128 LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS--------------------FVGTPYWMAPEVILAM- 186 (307)
T ss_pred HHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC--------------------ccCCccccCceeeecc-
Confidence 9999999999999999999999999999999999875543210 0011234444432100
Q ss_pred HHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhcc
Q 005274 413 TKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLT 492 (704)
Q Consensus 413 ~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~ 492 (704)
-...++...|.|++|.++.++.... .++.-......+ .. +...-.|.+. ..
T Consensus 187 -------~~~~~~~~sDv~s~G~il~el~tg~--~p~~~~~~~~~~-~~------~~~~~~~~~~-------------~~ 237 (307)
T cd06607 187 -------DEGQYDGKVDVWSLGITCIELAERK--PPLFNMNAMSAL-YH------IAQNDSPTLS-------------SN 237 (307)
T ss_pred -------CCCCCCcccchHHHHHHHHHHHcCC--CCCCCccHHHHH-HH------HhcCCCCCCC-------------ch
Confidence 0011233456677777766655421 111111111100 00 0111111111 01
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
..+.++++++++++..||..|.+..+-+.|..+
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 256789999999999999999998888777665
No 341
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.62 E-value=1.7e-14 Score=146.61 Aligned_cols=239 Identities=18% Similarity=0.227 Sum_probs=144.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|....+|+.||+|+....... .+....+.+|+..+++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS------------------------------EKEREDALNEVKILKK 55 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC------------------------------hHHHHHHHHHHHHHHh
Confidence 5799999999999999888999999997532111 1222344556655555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------hHHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------l~e~~v~~~L~qLh~~G~ 341 (704)
.+| +++.-+.-........+++|||++|++|.+..... -.-.++..++.+||+.|+
T Consensus 56 l~~-----------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ 124 (258)
T cd08215 56 LNH-----------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI 124 (258)
T ss_pred cCC-----------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 543 22222222223346788999999999998764321 112466778999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
+|+|++|.||+++.++.++++|||++........ .. .. ...+..+.+|+... .
T Consensus 125 ~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~--------~~------~~~~~~y~~pe~~~-----------~ 177 (258)
T cd08215 125 LHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--LA--------KT------VVGTPYYLSPELCQ-----------N 177 (258)
T ss_pred ecccCChHHeEEcCCCcEEECCccceeecccCcc--ee--------cc------eeeeecccChhHhc-----------c
Confidence 9999999999999999999999999876544320 00 00 00011223332110 0
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
...+...|.|++|.++.++... ..++.-.. ...+..... .+ .... +-...+.+++++
T Consensus 178 ~~~~~~~Dv~slG~~~~~l~~g--~~p~~~~~-~~~~~~~~~--~~-------~~~~-----------~~~~~~~~~~~~ 234 (258)
T cd08215 178 KPYNYKSDIWSLGCVLYELCTL--KHPFEGEN-LLELALKIL--KG-------QYPP-----------IPSQYSSELRNL 234 (258)
T ss_pred CCCCccccHHHHHHHHHHHHcC--CCCCCCCc-HHHHHHHHh--cC-------CCCC-----------CCCCCCHHHHHH
Confidence 1122234556666655554431 11221111 111111110 00 0110 112457789999
Q ss_pred HHHhhhccccCCCCHHHHHhhhh
Q 005274 502 LVALLYKEGVFRIDRLESLLTES 524 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~ 524 (704)
+++||..||..|++..+.|.|+.
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred HHHHcCCChhhCcCHHHHhcCCC
Confidence 99999999999999999887753
No 342
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.62 E-value=1.6e-16 Score=165.50 Aligned_cols=284 Identities=19% Similarity=0.236 Sum_probs=163.9
Q ss_pred cccCCccccccccceEEEEEEccCCcEEEEEEe-cCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 190 SEISPEPVAAASLGQVYQARLRQSGRVVAVKVQ-RPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 190 ~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVq-rP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
.+..-.|++.|.= .|.-|-+.-++++||+|.. +| ... ..-+++..+|
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n------------------------------~~~akra~re 65 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQN------------------------------QTHAKRAYRE 65 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCc-ccc------------------------------Cccchhhhhh
Confidence 4455678888876 6777877778999999964 33 110 0123566788
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-------hhhHHHHHHHHHHHHHHCCc
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-------LYLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-------~~l~e~~v~~~L~qLh~~G~ 341 (704)
+..+.-..| +++-..-++..|.-..+.-...++|||++++ .+.++.. .+.+-.++.|+.+++|+.||
T Consensus 66 l~l~~~v~~-----~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 66 LKLMKCVNH-----KNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred hhhhhhhcc-----cceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 877776665 2222233455555555555678899999975 5554432 13344788999999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
+|||+||.||++..++.+|++|||++..-...++.. . .+...|+...+.+.++| ..+.+|.+++++++.++..
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt-----p-yVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~ 212 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT-----P-YVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELIL 212 (369)
T ss_pred eecccCcccceecchhheeeccchhhcccCcccccC-----c-hhheeeccCchheeccC-CcccchhhhhhhHHHHHhh
Confidence 999999999999999999999999998766553221 1 12233344444444444 3444455555455555443
Q ss_pred H-HhhccCCcc-CHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhh---cCCCCccccccchhHHhhhccCCCh
Q 005274 422 N-AVAKGVRNI-SFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAIS---SNPNYKVLGSTYPYIARKVLTDSSP 496 (704)
Q Consensus 422 ~-~~~~~~~~~-s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~---ldP~~~i~~~a~P~i~r~ll~d~sp 496 (704)
. .+..|-+.+ +++.+.+.++.....|.-++++.-....+..- +-.+.. +-||-.+.. ....- .-.+.
T Consensus 213 ~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~--~y~~~~f~~~fpD~~f~~-----~~e~~-~~~~~ 284 (369)
T KOG0665|consen 213 GTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRP--QYQAISFSELFPDSLFPV-----VLEGS-KLDCS 284 (369)
T ss_pred ceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcCh--HhhccchhhhCCcccccc-----cccCC-ccchH
Confidence 2 122222222 12333333332222222222221111111000 000111 112211110 00000 12344
Q ss_pred HHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 497 QLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 497 ~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
.+|++|.+||+.||..|++.-++|-|+|+.
T Consensus 285 ~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 285 LARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 689999999999999999999999999973
No 343
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.62 E-value=7.3e-15 Score=151.06 Aligned_cols=134 Identities=16% Similarity=0.133 Sum_probs=97.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+ +++.||+|+.+..... ....+..|+..++.
T Consensus 12 ~~ig~g~~~~vy~~~~~-~~~~~~~k~~~~~~~~--------------------------------~~~~~~~e~~~l~~ 58 (261)
T cd05148 12 RKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLL--------------------------------KQQDFQKEVQALKR 58 (261)
T ss_pred hhhccCCCccEEEeEec-CCCcEEEEeccccchh--------------------------------hHHHHHHHHHHHhc
Confidence 56999999999999998 4999999997643110 11234456666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| .++.+ ...+.......+++|||++|++|.++... ...-.++..++.+||+.|++|
T Consensus 59 l~~-~~i~~----------~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h 127 (261)
T cd05148 59 LRH-KHLIS----------LFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIH 127 (261)
T ss_pred CCC-cchhh----------eeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 554 12222 11223345667899999999999887431 112256777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|++|.||+++.++.++++|||.+..+..
T Consensus 128 ~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 128 RDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred cccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999999999999999876543
No 344
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.62 E-value=1.1e-14 Score=152.46 Aligned_cols=246 Identities=19% Similarity=0.211 Sum_probs=138.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+++.+.+|+.||||..+..... +....+..|++.+..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~e~~~l~~ 58 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-------------------------------KEQKRLLMDLDVVMR 58 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-------------------------------HHHHHHHHHHHHHHH
Confidence 5699999999999999989999999987643111 111223334333322
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-------h-------hhHHHHHHHHHHHHHH-C
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-------L-------YLIEVGVYCSFNQLLE-K 339 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-------~-------~l~e~~v~~~L~qLh~-~ 339 (704)
.. +++++.--.-+.......+++|||+.+ .+.++.. . ...-.++..++.++|+ .
T Consensus 59 ~~----------~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 127 (288)
T cd06616 59 SS----------DCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL 127 (288)
T ss_pred hc----------CCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 22 123322111123335677899999865 4433211 0 1122456678899997 5
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
|++|+|+||.||+++.+|.++++|||++..+...... .....+.++++|+.-...
T Consensus 128 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------------~~~~~~~~y~aPE~~~~~-------- 182 (288)
T cd06616 128 KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK-----------------TRDAGCRPYMAPERIDPS-------- 182 (288)
T ss_pred CeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc-----------------ccccCccCccCHHHhccc--------
Confidence 9999999999999999999999999998754321100 000112233433311000
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLK 499 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr 499 (704)
-...++...|.|++|.++.++.. -+.|+. ........+ .-+.....|... .......++++.
T Consensus 183 ~~~~~~~~~Di~slG~il~el~~--g~~p~~---~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~~~l~ 244 (288)
T cd06616 183 ARDGYDVRSDVWSLGITLYEVAT--GKFPYP---KWNSVFDQL---TQVVKGDPPILS----------NSEEREFSPSFV 244 (288)
T ss_pred cccCCcchhhhhHHHHHHHHHHh--CCCCch---hcchHHHHH---hhhcCCCCCcCC----------CcCCCccCHHHH
Confidence 00012233456666666655543 111211 110000000 000001111110 001124688999
Q ss_pred HHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+++++++.+||..|.+.-+-+.|+.+
T Consensus 245 ~li~~~l~~~p~~Rpt~~~i~~~~~~ 270 (288)
T cd06616 245 NFINLCLIKDESKRPKYKELLEHPFI 270 (288)
T ss_pred HHHHHHccCChhhCcCHHHHhcChhh
Confidence 99999999999999999888888876
No 345
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.61 E-value=7.4e-15 Score=151.79 Aligned_cols=244 Identities=15% Similarity=0.142 Sum_probs=141.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+.+.+|+.||||+.+...... + ..+....+.+|+..++.
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-----------------------~----~~~~~~~~~~E~~~l~~ 60 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP-----------------------E----TSKEVNALECEIQLLKN 60 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc-----------------------c----cHHHHHHHHHHHHHHHh
Confidence 57999999999999999899999999875321100 0 00111234445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeec--ccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQ--TTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~--ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-..-++.. ....+++|||++|+.|.+.... .-.-.++..++.++|+.|++|
T Consensus 61 l~h-----------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H 129 (265)
T cd06652 61 LLH-----------ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVH 129 (265)
T ss_pred cCC-----------CCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 433 333222222221 2346799999999999876432 111256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|++|.||+++.+|.++++|||++..+...... ..+. .....+.++++|+.-. ...
T Consensus 130 ~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~----------~~~~---~~~~~~~~y~aPE~~~-----------~~~ 185 (265)
T cd06652 130 RDIKGANILRDSVGNVKLGDFGASKRLQTICLS----------GTGM---KSVTGTPYWMSPEVIS-----------GEG 185 (265)
T ss_pred CCCCHHHEEecCCCCEEECcCcccccccccccc----------cccc---ccCCCCccccChhhhc-----------CCC
Confidence 999999999999999999999998765321100 0000 0001123444444211 011
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
.+...|.|++|.++.++.. -..++........+.+ . . ..|.... .| ...+..+.++++
T Consensus 186 ~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~-~-----~---~~~~~~~----~~-------~~~~~~~~~~i~ 243 (265)
T cd06652 186 YGRKADIWSVGCTVVEMLT--EKPPWAEFEAMAAIFK-I-----A---TQPTNPV----LP-------PHVSDHCRDFLK 243 (265)
T ss_pred CCcchhHHHHHHHHHHHhh--CCCCCCccchHHHHHH-H-----h---cCCCCCC----Cc-------hhhCHHHHHHHH
Confidence 2233466777777766654 1223322222211111 1 0 1111000 11 234677889999
Q ss_pred HhhhccccCCCCHHHHHhhh
Q 005274 504 ALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~ 523 (704)
+++. +|..|.+.-+-+.|+
T Consensus 244 ~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 244 RIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HHhc-ChhhCCCHHHHhcCc
Confidence 9885 899999986655554
No 346
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.61 E-value=1.2e-14 Score=154.54 Aligned_cols=253 Identities=18% Similarity=0.141 Sum_probs=148.2
Q ss_pred HhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHH
Q 005274 180 ELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVD 259 (704)
Q Consensus 180 elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivd 259 (704)
-+...++..|... +.||.|++|+||+|+.+.+|+.||||..+..... .+
T Consensus 8 ~~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~ 56 (308)
T cd06634 8 FFKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-----------------------------SN 56 (308)
T ss_pred hhcCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-----------------------------Ch
Confidence 3445566667655 5699999999999999889999999987532100 00
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHH
Q 005274 260 EWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGV 329 (704)
Q Consensus 260 e~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v 329 (704)
+....+.+|+..++..+| +++.-...+.......++||||+.| .+.+.... ...-.++
T Consensus 57 ~~~~~~~~e~~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l 124 (308)
T cd06634 57 EKWQDIIKEVRFLQKLRH-----------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGA 124 (308)
T ss_pred HHHHHHHHHHHHHHhCCC-----------CCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 111233445555444433 3322222233445678899999976 55544211 1112466
Q ss_pred HHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccch
Q 005274 330 YCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEK 409 (704)
Q Consensus 330 ~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~ 409 (704)
..++.++|+.|++|+|++|.||+++.+|.++++|||++......... ..+.++++|+.-.
T Consensus 125 ~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------~~~~~y~aPE~~~ 184 (308)
T cd06634 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF--------------------VGTPYWMAPEVIL 184 (308)
T ss_pred HHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccc--------------------cCCccccCHHHHh
Confidence 77899999999999999999999999999999999998765432100 0112333333210
Q ss_pred HHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhh
Q 005274 410 EAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARK 489 (704)
Q Consensus 410 ~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ 489 (704)
. .-....+...|.|++|.++.++.... .++.-....... .-+.....|...
T Consensus 185 ~--------~~~~~~~~~~Di~slG~il~el~~g~--~p~~~~~~~~~~-------~~~~~~~~~~~~------------ 235 (308)
T cd06634 185 A--------MDEGQYDGKVDVWSLGITCIELAERK--PPLFNMNAMSAL-------YHIAQNESPALQ------------ 235 (308)
T ss_pred h--------cccCCCCcccchHHHHHHHHHHHcCC--CCCccccHHHHH-------HHHhhcCCCCcC------------
Confidence 0 00011222346667776666554321 111111001000 000111111110
Q ss_pred hccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 490 VLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 490 ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
....+..++++++++|..+|..|.+.-+-+.|..+
T Consensus 236 -~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 236 -SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred -cccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 12457789999999999999999998877777654
No 347
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.61 E-value=5.3e-15 Score=153.39 Aligned_cols=136 Identities=24% Similarity=0.360 Sum_probs=97.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|.+|.||+|+...+|+.||+|+....... +.+...+..|+..++.
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 54 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE------------------------------EGIPSTALREISLLKE 54 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEecccccc------------------------------ccccHHHHHHHHHHHh
Confidence 4689999999999999988999999998754211 1122344456666665
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+| ..+...++ +.......+++|||+++ +|.++.... ..-.++..++.+||+.|++|+
T Consensus 55 ~~~-~~i~~~~~----------~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (282)
T cd07829 55 LKH-PNIVKLLD----------VIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHR 122 (282)
T ss_pred cCC-CCHHHHHh----------hhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 543 22222221 11223578899999985 677654321 112566778999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|++|.||+++.+|.++++|||.+.....
T Consensus 123 ~l~~~ni~~~~~~~~~l~d~g~~~~~~~ 150 (282)
T cd07829 123 DLKPQNILINRDGVLKLADFGLARAFGI 150 (282)
T ss_pred CCChheEEEcCCCCEEEecCCcccccCC
Confidence 9999999999999999999999876543
No 348
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.61 E-value=1.9e-14 Score=150.03 Aligned_cols=135 Identities=18% Similarity=0.164 Sum_probs=94.8
Q ss_pred ccccccccceEEEEEEccCCc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|++|.||+|+.+.+|+ .||+|+..+.... +....+.+|+.
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~-------------------------------~~~~~~~~e~~ 61 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP-------------------------------KANKEILDEAY 61 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH-------------------------------HHHHHHHHHHH
Confidence 579999999999999887775 5899987643210 11122333433
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G 340 (704)
.+...+| +++.-..-+. .+...+++|||++|++|.+.... ...-.++..++.+||+.|
T Consensus 62 ~l~~l~h-----------~~i~~~~~~~-~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 62 VMASVDH-----------PHVVRLLGIC-LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred HHHhCCC-----------CCcceEEEEE-ecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3333322 3322111112 23678999999999999886432 112257778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||.||+++.++.++++|||++..+..
T Consensus 130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999999999999999999987653
No 349
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.61 E-value=8.4e-15 Score=151.28 Aligned_cols=134 Identities=21% Similarity=0.195 Sum_probs=93.9
Q ss_pred cccccccceEEEEEEccCC------cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSG------RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG------~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
.||+|++|.||+|+.+..+ +.||||....+... +-...+.+|+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~e~ 50 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD-------------------------------QEKKEFLKEA 50 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccch-------------------------------hhHHHHHHHH
Confidence 5899999999999986433 68999986543210 1112233344
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------------hHHHHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------------LIEVGVYCSF 333 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------------l~e~~v~~~L 333 (704)
+.++..+| +++.-..-+.......+++|||++|++|.+..... ..-.++..++
T Consensus 51 ~~l~~l~h-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 119 (269)
T cd05044 51 HLMSNFNH-----------PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119 (269)
T ss_pred HHHHhcCC-----------CCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHH
Confidence 44433332 44443333444556789999999999998764310 1124667788
Q ss_pred HHHHHCCccccCCCCCcEEEecCC-----cEEEEecCCccccC
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDG-----KLAYIDFGMMGEFK 371 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG-----~l~liDFGl~~~l~ 371 (704)
.++|+.|++|+|+||.||+++.++ .++++|||++..+.
T Consensus 120 ~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~ 162 (269)
T cd05044 120 VYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIY 162 (269)
T ss_pred HHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccc
Confidence 999999999999999999999888 89999999987654
No 350
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.61 E-value=1.8e-14 Score=148.24 Aligned_cols=134 Identities=17% Similarity=0.183 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEcc---CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQ---SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~---tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
.||+|+||+||+|++.. ++..||||........ +....+.+|+..+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-------------------------------~~~~~~~~e~~~l 50 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDL-------------------------------EEVEQFLKEGIIM 50 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCH-------------------------------HHHHHHHHHHHHH
Confidence 58999999999999753 3457999986421100 0112333444444
Q ss_pred HHHhhHHHHHHHhcCCcceeec-eeeeecccceeEEEEeccCCChhhHHhh--------hh--HHHHHHHHHHHHHHCCc
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIP-EMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YL--IEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP-~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l--~e~~v~~~L~qLh~~G~ 341 (704)
+..+| +++.-. .......+..+++|||+.|++|.++... .. .-.++..++.++|+.|+
T Consensus 51 ~~l~h-----------~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 119 (262)
T cd05058 51 KDFSH-----------PNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF 119 (262)
T ss_pred ccCCC-----------CCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 33332 333222 2222334557899999999999887432 11 12467788999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+|+||.||+++.++.++++|||++..+.
T Consensus 120 ~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 120 VHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred cccccCcceEEEcCCCcEEECCcccccccc
Confidence 999999999999999999999999987654
No 351
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.61 E-value=1.8e-14 Score=149.12 Aligned_cols=132 Identities=13% Similarity=0.220 Sum_probs=92.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|++. ++..||||+.++.... .+.+.+|+..+..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~valK~~~~~~~~---------------------------------~~~~~~E~~~l~~ 57 (262)
T cd05071 12 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---------------------------------PEAFLQEAQVMKK 57 (262)
T ss_pred eecCCCCCCcEEEEEec-CCceEEEEecccCccC---------------------------------HHHHHHHHHHHHh
Confidence 46999999999999987 4456999997642110 0123334444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++....-+. .....+++|||++|++|.++... ...-.++..++.++|+.|++|
T Consensus 58 l~~-----------~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (262)
T cd05071 58 LRH-----------EKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 125 (262)
T ss_pred CCC-----------CCcceEEEEE-CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 322 3322111111 23457899999999999877532 011256677899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+||+||+++.++.++++|||.+..+..
T Consensus 126 ~dl~p~Nill~~~~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 126 RDLRAANILVGENLVCKVADFGLARLIED 154 (262)
T ss_pred cccCcccEEEcCCCcEEeccCCceeeccc
Confidence 99999999999999999999999876653
No 352
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.61 E-value=6.2e-16 Score=175.39 Aligned_cols=199 Identities=21% Similarity=0.313 Sum_probs=139.5
Q ss_pred CCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCc---EEEEEEecCChhhhHHHHHHHHHHH
Q 005274 164 QITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGR---VVAVKVQRPGVQAAISLDIFILHFI 240 (704)
Q Consensus 164 ~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~---~VAVKVqrP~i~~~i~~Dl~ilr~l 240 (704)
-+.|+.+|+--+.+. ||-+.++--+-.|+ +.||+|.||.||+|+++..|+ .||||-.+-|-.+.
T Consensus 606 YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek----------- 672 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK----------- 672 (996)
T ss_pred ecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHH-----------
Confidence 345665554333322 33333333333443 589999999999999998774 59999998765442
Q ss_pred HHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH
Q 005274 241 AGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK 320 (704)
Q Consensus 241 a~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~ 320 (704)
.-.||+.||.-+-.|. +|+|...+-.---+...++++|||+++.|+.+.
T Consensus 673 --------------------------qrrdFL~EAsIMGQFd-----HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFL 721 (996)
T KOG0196|consen 673 --------------------------QRRDFLSEASIMGQFD-----HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFL 721 (996)
T ss_pred --------------------------HHhhhhhhhhhcccCC-----CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHH
Confidence 2247888988764443 366655554444566778999999999999987
Q ss_pred hh--------hhHH--HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHH----------
Q 005274 321 DL--------YLIE--VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE---------- 380 (704)
Q Consensus 321 ~~--------~l~e--~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~---------- 380 (704)
+. .++. .||.++++||-+.|++|||+-..|||++.+-.+|+.|||+++.+.++.-..+..
T Consensus 722 R~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWT 801 (996)
T KOG0196|consen 722 RQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWT 801 (996)
T ss_pred hhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeec
Confidence 53 2333 788999999999999999999999999999999999999999886554222211
Q ss_pred HHHHhhccChhHHHHHHHhcCCCCCcc
Q 005274 381 ACLHLVNRDFDALAKDFVTLGLLPPTA 407 (704)
Q Consensus 381 ~~~~l~~~d~~~la~d~~slG~l~p~~ 407 (704)
+-.++..+.+ ..+.|+|+.|++-.|+
T Consensus 802 APEAIa~RKF-TsASDVWSyGIVmWEV 827 (996)
T KOG0196|consen 802 APEAIAYRKF-TSASDVWSYGIVMWEV 827 (996)
T ss_pred ChhHhhhccc-CchhhccccceEEEEe
Confidence 1122333333 3588999999986553
No 353
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.61 E-value=3.1e-15 Score=164.95 Aligned_cols=210 Identities=15% Similarity=0.150 Sum_probs=135.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||+|-||.||.|+++ ....||||.++++-.. .+.+.+|+..++.
T Consensus 212 ~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---------------------------------~~~f~~Ea~iMk~ 257 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---------------------------------PEAFLREAQIMKK 257 (468)
T ss_pred HHhcCCccceEEEEEEc-CCCcccceEEeccccC---------------------------------hhHHHHHHHHHHh
Confidence 46999999999999995 4459999999876211 0122344444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hh--HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YL--IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l--~e~~v~~~L~qLh~~G~~H 343 (704)
++| ++++--+-+.......+|||||+..+.|.++.+. .+ ...+|+.++.||.+++++|
T Consensus 258 L~H-----------~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IH 326 (468)
T KOG0197|consen 258 LRH-----------EKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIH 326 (468)
T ss_pred Ccc-----------cCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccc
Confidence 444 3333333333333458999999999999998652 12 2378999999999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHH-------HHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG-------FIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKAL 416 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~-------~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L 416 (704)
|||-.-|||++.++.+||.||||++.+.++.... +--..+..++..-...+.|+|+.|++.
T Consensus 327 RDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL------------ 394 (468)
T KOG0197|consen 327 RDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLL------------ 394 (468)
T ss_pred hhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhH------------
Confidence 9999999999999999999999999655442211 001233444445556778888888763
Q ss_pred HHHHHHHhhccCCccCHHhHHHHHHHHHh-hcCCCCChhHHHHHHHH
Q 005274 417 TGVFQNAVAKGVRNISFGDLLGNLGATMY-KFKFRIPSYFSLVIRSL 462 (704)
Q Consensus 417 ~~v~~~~~~~~~~~~s~~~i~~~L~~~~~-~~~~~iP~~~~liiRsl 462 (704)
.++|.. -..+-..++..+++..+...-+ ..|-.-|+++..+++.+
T Consensus 395 ~E~fT~-G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 395 WELFTY-GRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred HHHhcc-CCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 233321 1123355666666554443211 12334556666666554
No 354
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.61 E-value=1.2e-14 Score=149.22 Aligned_cols=127 Identities=21% Similarity=0.240 Sum_probs=91.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|+||+|.. +|+.||+|+.+... ....+.+|+..+..
T Consensus 12 ~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----------------------------------~~~~~~~e~~~l~~ 55 (254)
T cd05083 12 EIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----------------------------------TAQAFLEETAVMTK 55 (254)
T ss_pred eeeccCCCCceEeccc--CCCceEEEeecCcc----------------------------------hHHHHHHHHHHHHh
Confidence 5799999999999975 78999999875321 01234455555444
Q ss_pred HhhHHHHHHHhcCCcce-eeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDV-LIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V-~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~G~~ 342 (704)
.+| +++ .+...+ .....+++|||++|++|.++.... ..-.++..++.++|+.|++
T Consensus 56 ~~~-----------~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 56 LHH-----------KNLVRLLGVI--LHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred CCC-----------CCcCeEEEEE--cCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 433 222 222222 234578999999999998774320 1124667789999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
|+|+||+||+++.+|.++++|||.+...
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceec
Confidence 9999999999999999999999998754
No 355
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.61 E-value=6.6e-15 Score=153.80 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=95.3
Q ss_pred ccccccccceEEEEEE----ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARL----RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~l----k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||.|+||+||.++. ..+|+.||+|+.+.+... .....+.+|++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~E~~ 58 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ-------------------------------QNTSGWKKEIN 58 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh-------------------------------HHHHHHHHHHH
Confidence 5699999999987653 347889999998753211 11223445555
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeec--ccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQ--TTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~--ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G 340 (704)
.+...+| +++.-..-+... ....+++|||++|++|.+.... ...-.++..++.+||+.|
T Consensus 59 ~l~~l~h-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 59 ILKTLYH-----------ENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred HHHhCCC-----------CCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5554443 333222212111 2346899999999999886432 112256778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||+||+++.++.++++|||++..+..
T Consensus 128 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 128 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred eeccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999999999999999876643
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.60 E-value=8.2e-15 Score=151.21 Aligned_cols=134 Identities=13% Similarity=0.203 Sum_probs=91.1
Q ss_pred ccccccccceEEEEEEccCCcE-------EEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRV-------VAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFR 267 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~-------VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~ 267 (704)
++||.|+||+||+|..+.++.. ||+|+..... ....+.+.+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--------------------------------~~~~~~~~~ 48 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--------------------------------RNYSESFFE 48 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--------------------------------HHHHHHHHH
Confidence 4699999999999998755544 7777643211 112233445
Q ss_pred HHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHH
Q 005274 268 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLL 337 (704)
Q Consensus 268 Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh 337 (704)
|...++...| +++.-..-+.......++||||++|+.|.++... .-.-.++..++.+||
T Consensus 49 e~~~l~~~~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH 117 (258)
T cd05078 49 AASMMSQLSH-----------KHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE 117 (258)
T ss_pred HHHHHHhCCC-----------CChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5555554443 3322212122334567899999999999877431 012256778899999
Q ss_pred HCCccccCCCCCcEEEecCCc--------EEEEecCCccccC
Q 005274 338 EKGFYHADPHPGNLFRSYDGK--------LAYIDFGMMGEFK 371 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG~--------l~liDFGl~~~l~ 371 (704)
+.|++|+|+||.||+++.++. ++++|||.+....
T Consensus 118 ~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 118 DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred HCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999999999999987765 6899999876543
No 357
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.60 E-value=1.6e-14 Score=148.90 Aligned_cols=131 Identities=16% Similarity=0.218 Sum_probs=94.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|..+ +|+.||||+.+.+... ...+.+|++.++.
T Consensus 12 ~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---------------------------------~~~~~~E~~~l~~ 57 (260)
T cd05067 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---------------------------------PEAFLAEANLMKQ 57 (260)
T ss_pred eeeccCccceEEeeecC-CCceEEEEEecCCCCc---------------------------------HHHHHHHHHHHHh
Confidence 56999999999999986 7899999987643211 0123445554444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----h-------hHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----Y-------LIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----~-------l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++.-...+. .....+++|||++|++|.+.... . ..-.++..++.+||+.|++|
T Consensus 58 l~h-----------~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H 125 (260)
T cd05067 58 LQH-----------PRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIH 125 (260)
T ss_pred cCC-----------cCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 433 3322211121 23457899999999999876421 0 12246777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+||.||+++.++.++++|||++....
T Consensus 126 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 153 (260)
T cd05067 126 RDLRAANILVSETLCCKIADFGLARLIE 153 (260)
T ss_pred ccccHHhEEEcCCCCEEEccCcceeecC
Confidence 9999999999999999999999987665
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.60 E-value=2.4e-14 Score=148.07 Aligned_cols=244 Identities=13% Similarity=0.102 Sum_probs=143.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+++.+|+.||+|+......... ..+....+.+|+..++.
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~---------------------------~~~~~~~~~~ei~~l~~ 60 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE---------------------------TSKEVNALECEIQLLKN 60 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch---------------------------hhHHHHHHHHHHHHHHH
Confidence 579999999999999998999999998643211000 01112344455555544
Q ss_pred HhhHHHHHHHhcCCccee-eceeeeec-ccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVL-IPEMYVEQ-TTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~-vP~v~~e~-ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| +++. +...+... ....+++|||++|+.|.+.... .-.-.++..++.+||+.|++|
T Consensus 61 l~h-----------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H 129 (264)
T cd06653 61 LRH-----------DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVH 129 (264)
T ss_pred cCC-----------CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 443 2322 11112111 2457899999999999876421 112256778899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHH
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNA 423 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~ 423 (704)
+|++|+||+++.++.++++|||++..+...... + ........+.++.+|+.-. ...
T Consensus 130 ~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~-~~~~~~~~~~~y~aPE~~~-----------~~~ 185 (264)
T cd06653 130 RDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------G-TGIKSVTGTPYWMSPEVIS-----------GEG 185 (264)
T ss_pred CCCCHHHEEEcCCCCEEECcccccccccccccc------------C-ccccccCCcccccCHhhhc-----------CCC
Confidence 999999999999999999999998865321100 0 0000011123344443211 011
Q ss_pred hhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHH
Q 005274 424 VAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLV 503 (704)
Q Consensus 424 ~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~ 503 (704)
.+...|.|++|.++.++.. -..++.-......+.+.. .....|. +-...++++.+.++
T Consensus 186 ~~~~~Di~slG~il~~l~~--g~~p~~~~~~~~~~~~~~------~~~~~~~--------------~p~~~~~~~~~~i~ 243 (264)
T cd06653 186 YGRKADVWSVACTVVEMLT--EKPPWAEYEAMAAIFKIA------TQPTKPM--------------LPDGVSDACRDFLK 243 (264)
T ss_pred CCccccHHHHHHHHHHHHh--CCCCCCccCHHHHHHHHH------cCCCCCC--------------CCcccCHHHHHHHH
Confidence 1223466777777766654 122332222222111110 0111111 11356788999999
Q ss_pred HhhhccccCCCCHHHHHhhh
Q 005274 504 ALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 504 ~lL~~d~~~R~~rle~Ll~~ 523 (704)
+++. ++..|.++-+-|.|+
T Consensus 244 ~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 244 QIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHhc-CcccCccHHHHhcCC
Confidence 9998 468899888777764
No 359
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.60 E-value=1.4e-14 Score=150.51 Aligned_cols=135 Identities=19% Similarity=0.260 Sum_probs=96.0
Q ss_pred ccccccccceEEEEEEcc----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|++|.||+|++.. +|+.||||+.++.... +....+..|++
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~~~~~ei~ 58 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-------------------------------QHRSDFEREIE 58 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-------------------------------HHHHHHHHHHH
Confidence 579999999999999743 4889999998754221 11223444555
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeec--ccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQ--TTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~--ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~ 338 (704)
.++...| +++.-..-+... ....+++|||++|++|.++... ...-.++..++.+||+
T Consensus 59 ~l~~l~~-----------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 127 (284)
T cd05038 59 ILRTLDH-----------ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127 (284)
T ss_pred HHHhCCC-----------CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh
Confidence 4444433 222211112222 3357899999999999887532 1122566778999999
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.|++|+|+||.||+++.++.++++|||++..+.
T Consensus 128 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 128 QRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 999999999999999999999999999998765
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.60 E-value=2.2e-14 Score=155.13 Aligned_cols=142 Identities=19% Similarity=0.231 Sum_probs=93.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||.|++|.||+|+.+.+|+.||+|+....-. +..+.+.+|+..++.
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--------------------------------~~~~~~~~Ei~~l~~ 58 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--------------------------------QSVKHALREIKIIRR 58 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--------------------------------chHHHHHHHHHHHHh
Confidence 689999999999999999999999998753211 111334556666666
Q ss_pred HhhHHHHHHHhcCCcce--eec---eeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDV--LIP---EMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V--~vP---~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~ 341 (704)
.+|. .+.+.++....- ... ... ......+++|||+++ .|.+.... ...-.++..++.+||+.|+
T Consensus 59 l~h~-~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi 135 (342)
T cd07854 59 LDHD-NIVKVYEVLGPSGSDLTEDVGSL-TELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANV 135 (342)
T ss_pred cCCC-cchhhHhhhcccccccccccccc-cccceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5542 222222110000 000 000 011246899999975 66554321 1223577888999999999
Q ss_pred cccCCCCCcEEEec-CCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSY-DGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~-dG~l~liDFGl~~~l~ 371 (704)
+|+|+||+||+++. ++.++++|||++..++
T Consensus 136 vH~dikp~Nili~~~~~~~kl~dfg~~~~~~ 166 (342)
T cd07854 136 LHRDLKPANVFINTEDLVLKIGDFGLARIVD 166 (342)
T ss_pred ccCCCCHHHEEEcCCCceEEECCcccceecC
Confidence 99999999999974 5678999999987654
No 361
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=6.7e-16 Score=160.86 Aligned_cols=170 Identities=19% Similarity=0.279 Sum_probs=123.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.||++.|..+++++|.+.+|+||+++.+ +..| .|+ |..+-
T Consensus 256 ~vigrgsyakvl~~~~~~t~qiyamkvvkkel---~ndd------------------edi---------------dwvqt 299 (593)
T KOG0695|consen 256 RVIGRGSYAKVLLVRLKKTDQIYAMKVVKKEL---VNDD------------------EDI---------------DWVQT 299 (593)
T ss_pred eeecCcchhhhhheehcccceeeehhhHHHHh---cCCc------------------ccc---------------hhHHh
Confidence 68999999999999999999999999987431 1111 122 22222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH-h--------hhhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK-D--------LYLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~-~--------~~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
-+|. -+.-.++|.++-....++..++.+.|.||++|++|.--. + .++....+..+|.+||+.||+.||
T Consensus 300 ek~v---fe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrd 376 (593)
T KOG0695|consen 300 EKHV---FEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRD 376 (593)
T ss_pred hHHH---HHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeee
Confidence 2221 112233455555555666788999999999999985321 1 134456777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCcccc-Ch-hHHHHHHH----HHHHhhccChhHHHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEF-KE-ELREGFIE----ACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l-~~-~~r~~~~~----~~~~l~~~d~~~la~d~~slG~l 403 (704)
+|-.|+|++..|++|+.|+||+++- .+ +...+|++ ..+.++.++-|+...|+|.+|++
T Consensus 377 lkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvl 440 (593)
T KOG0695|consen 377 LKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL 440 (593)
T ss_pred ccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHH
Confidence 9999999999999999999999863 22 23444544 45668888888999999999975
No 362
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.60 E-value=1.2e-14 Score=153.55 Aligned_cols=240 Identities=18% Similarity=0.139 Sum_probs=146.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|....+|..||+|+....-. ...+.+.+|+..++.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--------------------------------~~~~~~~~e~~~l~~ 72 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--------------------------------PKKELIINEILVMRE 72 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--------------------------------hHHHHHHHHHHHHhh
Confidence 679999999999999888999999998642100 001233445544443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHHHHHHHHHHHHHHCCccccCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIEVGVYCSFNQLLEKGFYHADP 346 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e~~v~~~L~qLh~~G~~H~Dp 346 (704)
.+| +++.-..-+.......++||||++|+.|.++... ...-.++..++.+||+.|++|+|+
T Consensus 73 l~h-----------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL 141 (293)
T cd06647 73 NKH-----------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 141 (293)
T ss_pred cCC-----------CCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccC
Confidence 332 4443333334446678999999999999876432 112246677899999999999999
Q ss_pred CCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhc
Q 005274 347 HPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAK 426 (704)
Q Consensus 347 hPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~ 426 (704)
+|+||+++.++.++++|||++........... ....+..+++|+... ...++.
T Consensus 142 ~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~----------------~~~~~~~y~~PE~~~-----------~~~~~~ 194 (293)
T cd06647 142 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRS----------------TMVGTPYWMAPEVVT-----------RKAYGP 194 (293)
T ss_pred CHHHEEEcCCCCEEEccCcceecccccccccc----------------cccCChhhcCchhhc-----------cCCCCc
Confidence 99999999999999999998876544321100 000111233333210 011222
Q ss_pred cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhh
Q 005274 427 GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALL 506 (704)
Q Consensus 427 ~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL 506 (704)
..|.|++|.++.++... ..+|........+.. . ...--|.+. .....++.+++++++++
T Consensus 195 ~~Dv~slG~ll~~ll~g--~~pf~~~~~~~~~~~-~------~~~~~~~~~------------~~~~~~~~l~~li~~~l 253 (293)
T cd06647 195 KVDIWSLGIMAIEMVEG--EPPYLNENPLRALYL-I------ATNGTPELQ------------NPEKLSAIFRDFLNRCL 253 (293)
T ss_pred hhhHHHHHHHHHHHHhC--CCCCCCCChhhheee-h------hcCCCCCCC------------CccccCHHHHHHHHHHc
Confidence 34566677666665542 222222111110000 0 000011111 01234678999999999
Q ss_pred hccccCCCCHHHHHhhhhH
Q 005274 507 YKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 507 ~~d~~~R~~rle~Ll~~~~ 525 (704)
..+|..|++.-+-+.|+.+
T Consensus 254 ~~~p~~Rp~~~~il~h~~~ 272 (293)
T cd06647 254 EMDVEKRGSAKELLQHPFL 272 (293)
T ss_pred cCChhhCcCHHHHhcCHHH
Confidence 9999999999888888876
No 363
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.60 E-value=1.5e-14 Score=164.50 Aligned_cols=195 Identities=16% Similarity=0.143 Sum_probs=110.6
Q ss_pred cceeEEEEeccCCChhhHHhhh---------------------------------hHHHHHHHHHHHHHHCCccccCCCC
Q 005274 302 TRKVLIMEWVEGQKLSEVKDLY---------------------------------LIEVGVYCSFNQLLEKGFYHADPHP 348 (704)
Q Consensus 302 s~~vLVmE~i~G~~L~d~~~~~---------------------------------l~e~~v~~~L~qLh~~G~~H~DphP 348 (704)
+..+|||||+++++|.++.... .+-.++..++.++|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 4578999999999987764210 0124566788999999999999999
Q ss_pred CcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccc----------hHHHHHHHHH
Q 005274 349 GNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAE----------KEAVTKALTG 418 (704)
Q Consensus 349 gNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d----------~~~i~~~L~~ 418 (704)
+||+++.++.++++|||++..+....... .. ....+.+|.+||.- ...+...+..
T Consensus 338 ~NILl~~~~~~kL~DFGla~~~~~~~~~~----------~~-----~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~ 402 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAVDMCTGINFN----------PL-----YGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSP 402 (507)
T ss_pred HhEEECCCCcEEEEeCcCccccccCCccC----------cc-----ccCCCcceeChhhhcCCCCCCccchhhhhhhhhh
Confidence 99999999999999999986543221100 00 00011233333321 1111111111
Q ss_pred HHHHHhhc--cCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhh---hhhcCCCCccccccchhHHhhhccC
Q 005274 419 VFQNAVAK--GVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGI---AISSNPNYKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 419 v~~~~~~~--~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi---~~~ldP~~~i~~~a~P~i~r~ll~d 493 (704)
+...++. .+|.|++|.++.++...-. .++.-...|..-.+........ ......+|. .+..
T Consensus 403 -~~~~yg~~~~~DvwSlGvil~em~~~~l-~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~------------~~d~ 468 (507)
T PLN03224 403 -FAWLYGRPDLFDSYTAGVLLMQMCVPEL-RPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS------------LLDR 468 (507)
T ss_pred -hHHhcCCCCccchhhHHHHHHHHHhCCC-CCccchhhhhhHHhhccchHHHHHhhcccCCCcc------------cccc
Confidence 1112222 3688999988877764110 0111000111111110000000 000111111 2345
Q ss_pred CChHHHHHHHHhhhccc---cCCCCHHHHHhhhhH
Q 005274 494 SSPQLKSSLVALLYKEG---VFRIDRLESLLTESL 525 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~---~~R~~rle~Ll~~~~ 525 (704)
.++.++|++.+||.+++ ..|+++-|+|-|+.|
T Consensus 469 ~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 469 NKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred cChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 68999999999999866 679999999999876
No 364
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.59 E-value=2.7e-14 Score=148.12 Aligned_cols=134 Identities=19% Similarity=0.371 Sum_probs=94.8
Q ss_pred ccccccccceEEEEEEc----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+-||.|+||.||+|+++ ..+..|+||+..+.... +....+.+|+.
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~-------------------------------~~~~~~~~e~~ 53 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE-------------------------------EEEEEFLNEIQ 53 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH-------------------------------HHHHHHHHHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc-------------------------------ccceeeeeccc
Confidence 46999999999999997 34678999998653221 11123333444
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEK 339 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~ 339 (704)
.++..+| +++.-..-+....+...+||||+++++|.++.... -.-.++..++.+||+.
T Consensus 54 ~l~~l~h-----------~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~ 122 (259)
T PF07714_consen 54 ILRKLRH-----------PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN 122 (259)
T ss_dssp HHHTHSB-----------TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccc-----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4333322 44443333444456689999999999998874321 1226788899999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
+++|+|++|.||+++.++.+|++|||++...
T Consensus 123 ~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 123 NIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp TEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999876
No 365
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.59 E-value=5.2e-15 Score=165.22 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=107.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||+|.||.|..|++..||..||||++.....+. .-...+++|++.++-
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~------------------------------~~~~k~~rev~imk~ 111 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP------------------------------SKRQKLGREVDIMKS 111 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcccCh------------------------------HHHHHHHHHHHHHHh
Confidence 57999999999999999999999999987432211 111347788888887
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hh-------HHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YL-------IEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l-------~e~~v~~~L~qLh~~G~~H~D 345 (704)
..| |+|+--.-+.+.....||||||+-|+.+.++... ++ .-.++.++++|+|.++|+|||
T Consensus 112 l~H-----------PnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrd 180 (596)
T KOG0586|consen 112 LNH-----------PNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRD 180 (596)
T ss_pred cCC-----------cceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccc
Confidence 776 4443333344556788999999999999987532 11 114677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChh
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
||..|||++.+-.++|+|||+...++..
T Consensus 181 Lk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 181 LKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred cchhhcccccccceeeeccccceeeccc
Confidence 9999999999999999999999987754
No 366
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.59 E-value=3.3e-14 Score=147.36 Aligned_cols=134 Identities=17% Similarity=0.191 Sum_probs=93.3
Q ss_pred ccccccccceEEEEEEccC---CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS---GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t---G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|++|.||+|+...+ ...||||..+..... +..+.+.+|+..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~-------------------------------~~~~~~~~e~~~ 60 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP-------------------------------SVREKFLQEAYI 60 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH-------------------------------HHHHHHHHHHHH
Confidence 5799999999999998643 246899987643211 112233445554
Q ss_pred HHHHhhHHHHHHHhcCCcce-eeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCC
Q 005274 272 KIEAKNGLKFRQLYGGIQDV-LIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V-~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G 340 (704)
++...| +++ .+.. +. .....+++|||++|++|.++... ...-.++..++.++|+.|
T Consensus 61 l~~~~h-----------~~i~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 61 MRQFDH-----------PHIVKLIG-VI-TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred HHhCCC-----------CchhceeE-EE-cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 444433 221 1111 11 13457899999999999887532 112256778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|++|.||+++.++.++++|||++..+..
T Consensus 128 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 128 FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 99999999999999999999999999876543
No 367
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.58 E-value=2.4e-14 Score=147.67 Aligned_cols=131 Identities=18% Similarity=0.253 Sum_probs=94.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|.+. ++..||+|+.+++-.. ...+.+|+..++.
T Consensus 12 ~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~---------------------------------~~~~~~e~~~l~~ 57 (260)
T cd05073 12 KKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMS---------------------------------VEAFLAEANVMKT 57 (260)
T ss_pred eEecCccceEEEEEEec-CCccEEEEecCCChhH---------------------------------HHHHHHHHHHHHh
Confidence 57999999999999976 6778999987754110 1233445555444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hh--HHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YL--IEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l--~e~~v~~~L~qLh~~G~~H 343 (704)
.+| ...+.+...+.+ ...+++|||++|++|.++... .. .-.++..++.++|+.|++|
T Consensus 58 l~~----------~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H 125 (260)
T cd05073 58 LQH----------DKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 125 (260)
T ss_pred cCC----------CCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 433 111222222222 567899999999999877432 11 1246777899999999999
Q ss_pred cCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 344 ADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 344 ~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|++|.||+++.++.++++|||.+..+.
T Consensus 126 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 153 (260)
T cd05073 126 RDLRAANILVSASLVCKIADFGLARVIE 153 (260)
T ss_pred cccCcceEEEcCCCcEEECCCcceeecc
Confidence 9999999999999999999999987654
No 368
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.58 E-value=2.1e-14 Score=151.85 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=65.9
Q ss_pred eeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhH
Q 005274 304 KVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL 374 (704)
Q Consensus 304 ~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~ 374 (704)
.+++||++.+ .+.+.... .-+..++..++.++|+.|++|||+||.|||+++++.++++|||+++.+....
T Consensus 102 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~ 180 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHG 180 (294)
T ss_pred EEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCC
Confidence 3678887743 33333211 1123567788999999999999999999999999999999999987653211
Q ss_pred H-------------HHHHHHHHHhhccChhHHHHHHHhcCCC
Q 005274 375 R-------------EGFIEACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 375 r-------------~~~~~~~~~l~~~d~~~la~d~~slG~l 403 (704)
. .....+.+.+..+..+....|+|++|++
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~ 222 (294)
T PHA02882 181 KHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYC 222 (294)
T ss_pred cccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHH
Confidence 0 0111122334444445567788888875
No 369
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.58 E-value=1.4e-14 Score=148.27 Aligned_cols=137 Identities=16% Similarity=0.273 Sum_probs=96.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|.||+|+.+.+|..||+|.....-.. ..-.+.+.+|+..++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~E~~~l~~ 55 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP------------------------------VKEKEASKKEVILLAK 55 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc------------------------------chhhHHHHHHHHHHHh
Confidence 6799999999999999989999999987531000 0011234456665555
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYH 343 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H 343 (704)
.+| .++.+.++ .....+..+++|||++|++|.+.... ...-.++..++.++|+.|++|
T Consensus 56 ~~h-~~i~~~~~----------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H 124 (257)
T cd08225 56 MKH-PNIVTFFA----------SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILH 124 (257)
T ss_pred CCC-CChhhhhh----------eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 544 22222211 22345678999999999999876431 011246778899999999999
Q ss_pred cCCCCCcEEEecCCc-EEEEecCCccccCh
Q 005274 344 ADPHPGNLFRSYDGK-LAYIDFGMMGEFKE 372 (704)
Q Consensus 344 ~DphPgNILv~~dG~-l~liDFGl~~~l~~ 372 (704)
+|++|.||+++.++. ++++|||.+..+..
T Consensus 125 ~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 125 RDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred ccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 999999999998865 69999999876643
No 370
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=4.9e-16 Score=165.51 Aligned_cols=206 Identities=17% Similarity=0.196 Sum_probs=133.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
..||.||||.|-.|.-+.|.+-+||||.+.++.-+ ..|+.. ... |
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvec----------------------------tm~------E 399 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVEC----------------------------TMV------E 399 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccc----------------------------eeh------h
Confidence 57999999999999999899999999998765211 011100 000 0
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.++..+-+..|.++-.....+.-.+.+.||||+.|++|.--... -+....+..+|-.||+.||+.||
T Consensus 400 ----KrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRD 475 (683)
T KOG0696|consen 400 ----KRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRD 475 (683)
T ss_pred ----hhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeee
Confidence 01111111111111111122335688999999999998644321 13346677788899999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccc--cChhHHHHHHH----HHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGE--FKEELREGFIE----ACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~--l~~~~r~~~~~----~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+|-.|+|++.+|+++|.||||+++ .+..+..++++ ..+.++..+.|+.+.|+|+.|++. .++
T Consensus 476 LKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLL------------yEm 543 (683)
T KOG0696|consen 476 LKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL------------YEM 543 (683)
T ss_pred ccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHH------------HHH
Confidence 999999999999999999999986 33344455554 456677888888999999999862 112
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSL 457 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~l 457 (704)
+. -..+++.-+ -++++..+.++.+..|..++.
T Consensus 544 la--GQpPFdGeD----E~elF~aI~ehnvsyPKslSk 575 (683)
T KOG0696|consen 544 LA--GQPPFDGED----EDELFQAIMEHNVSYPKSLSK 575 (683)
T ss_pred Hc--CCCCCCCCC----HHHHHHHHHHccCcCcccccH
Confidence 11 112333333 245566666677777766543
No 371
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.58 E-value=6.2e-16 Score=159.71 Aligned_cols=243 Identities=21% Similarity=0.214 Sum_probs=150.5
Q ss_pred cCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 192 ~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
++.+.||.|--|.|-.+..+.||+.+|+||.+.. ....+|+++
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------------------------------------~KARrEVeL 107 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------------------------------------PKARREVEL 107 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------------------------------------HHHHhHhhh
Confidence 5668999999999999999999999999997622 123455554
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeee---cccceeEEEEeccCCChhhHHhh----hh-------HHHHHHHHHHHHH
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVE---QTTRKVLIMEWVEGQKLSEVKDL----YL-------IEVGVYCSFNQLL 337 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e---~ss~~vLVmE~i~G~~L~d~~~~----~l-------~e~~v~~~L~qLh 337 (704)
.--+.. +..-|.|-.||.. ......+|||.++|+.|...... .+ +-.++..++++||
T Consensus 108 Hw~~s~---------h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH 178 (400)
T KOG0604|consen 108 HWMASG---------HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH 178 (400)
T ss_pred hhhhcC---------CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH
Confidence 443332 1112334444432 22345699999999999875321 12 2256778899999
Q ss_pred HCCccccCCCCCcEEEec---CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHH
Q 005274 338 EKGFYHADPHPGNLFRSY---DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTK 414 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~---dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~ 414 (704)
+.+|.|||+||+|+|.+. |.-+|++|||++++-.... ++.+..|.+..+..+.+
T Consensus 179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~---------------------~L~TPc~TPyYvaPevl-- 235 (400)
T KOG0604|consen 179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG---------------------DLMTPCFTPYYVAPEVL-- 235 (400)
T ss_pred hcchhhccCChhheeeecCCCCcceEecccccccccCCCc---------------------cccCCcccccccCHHHh--
Confidence 999999999999999864 5679999999998754211 11112222211111111
Q ss_pred HHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcC-CCCccccccchhHHhhhccC
Q 005274 415 ALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSN-PNYKVLGSTYPYIARKVLTD 493 (704)
Q Consensus 415 ~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ld-P~~~i~~~a~P~i~r~ll~d 493 (704)
-...++++-+.||+|.++ |-.-...||+++.-.+++. -|+-..+- -.|.+-..- | +.
T Consensus 236 -----g~eKydkscdmwSlgVim-------YIlLCGyPPFYS~hg~ais--pgMk~rI~~gqy~FP~pE--W------s~ 293 (400)
T KOG0604|consen 236 -----GPEKYDKSCDMWSLGVIM-------YILLCGYPPFYSNHGLAIS--PGMKRRIRTGQYEFPEPE--W------SC 293 (400)
T ss_pred -----CchhcCCCCCccchhHHH-------HHhhcCCCcccccCCccCC--hhHHhHhhccCccCCChh--H------hH
Confidence 112366677788876544 4444577777764432221 12211111 011111100 1 13
Q ss_pred CChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 494 SSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 494 ~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.|..++|+++.||.-+|..|++--+-+-|+-.
T Consensus 294 VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 294 VSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred HHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 46789999999999999999997776667643
No 372
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.58 E-value=8e-14 Score=142.29 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=97.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|++|.||+|+.+.+|+.||||+....... +.....+.+|+..++.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------------------------~~~~~~~~~e~~~l~~ 55 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS------------------------------QKEREDAVNEIRILAS 55 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhcc------------------------------HHHHHHHHHHHHHHHh
Confidence 5699999999999999889999999997642211 0111233445555554
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------h-------hHHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------Y-------LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~-------l~e~~v~~~L~qLh~~G~ 341 (704)
.+| +++.-..-+.......++||||++|.+|.++... . ..-.++..++.++|+.|+
T Consensus 56 l~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i 124 (256)
T cd08530 56 VNH-----------PNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI 124 (256)
T ss_pred CCC-----------CCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 443 2221111122234678899999999999876432 0 112467788999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
+|+|++|.||+++.++.++++|||++.....
T Consensus 125 ~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 125 LHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred ccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9999999999999999999999999876543
No 373
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.58 E-value=1.1e-15 Score=155.64 Aligned_cols=171 Identities=19% Similarity=0.274 Sum_probs=122.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.-||.|+||.|+|-.++++|+..|||.+|-... +.-.+++..|+|-...
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-------------------------------~keq~rll~e~d~~mk 118 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-------------------------------EKEQKRLLMEHDTVMK 118 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-------------------------------hHHHHHHHHHHHHHHh
Confidence 469999999999999999999999999885432 1224678889999999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh-------hhhHH-------HHHHHHHHHHH-HC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD-------LYLIE-------VGVYCSFNQLL-EK 339 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~-------~~l~e-------~~v~~~L~qLh-~~ 339 (704)
..|...+.++|+..-. .+..|+.||.++ .++..+-. .++.| .....+|.+|- +.
T Consensus 119 s~~cp~IVkfyGa~F~----------EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l 187 (361)
T KOG1006|consen 119 SSNCPNIVKFYGALFS----------EGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL 187 (361)
T ss_pred hcCCcHHHHHhhhhhc----------CCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh
Confidence 9999888888874322 567899999994 45555422 12222 11234577775 46
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH---HHH--HHHH-hhc-cChhHHHHHHHhcCCCCCcc
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG---FIE--ACLH-LVN-RDFDALAKDFVTLGLLPPTA 407 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~---~~~--~~~~-l~~-~d~~~la~d~~slG~l~p~~ 407 (704)
.++|||+||.|||++..|.+|+||||.++++.+..-.+ -+. +.++ +-. .+.+.+..|+|++|+..-|+
T Consensus 188 kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~Ev 262 (361)
T KOG1006|consen 188 KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEV 262 (361)
T ss_pred hhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeee
Confidence 89999999999999999999999999999886653221 111 1122 222 23467889999999865443
No 374
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.58 E-value=4.4e-14 Score=148.55 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=93.9
Q ss_pred ccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|++|.||+|+.. .++..|++|........ -.+.+.+|+
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--------------------------------~~~~~~~e~ 58 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA--------------------------------ARKDFQREA 58 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH--------------------------------HHHHHHHHH
Confidence 57999999999999854 24567999987532110 011223333
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------------------h
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------------------L 324 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------------------l 324 (704)
..+...+ ++++.-..-+.......++||||++|++|.++.... -
T Consensus 59 ~~l~~l~-----------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (291)
T cd05094 59 ELLTNLQ-----------HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 127 (291)
T ss_pred HHHhcCC-----------CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHH
Confidence 3332222 244443333445566789999999999998874310 1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.-.++..++.+||+.|++|+|+||.||+++.++.++++|||++....
T Consensus 128 i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~ 174 (291)
T cd05094 128 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY 174 (291)
T ss_pred HHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccC
Confidence 12567778999999999999999999999999999999999987653
No 375
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.58 E-value=1.1e-15 Score=167.99 Aligned_cols=183 Identities=23% Similarity=0.299 Sum_probs=124.0
Q ss_pred CHhHHHHHHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhH
Q 005274 151 PPSYLDELSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAI 230 (704)
Q Consensus 151 p~~~~~eL~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i 230 (704)
...|..|..+-|+..-..|++.+- ++ +=+|+|+-|-|++|+++ ++.||||..+ +.-
T Consensus 104 Gk~~s~e~k~qq~e~WeiPFe~Is----------------EL--eWlGSGaQGAVF~Grl~--netVAVKKV~----elk 159 (904)
T KOG4721|consen 104 GKAYSTEHKQQQEELWEIPFEEIS----------------EL--EWLGSGAQGAVFLGRLH--NETVAVKKVR----ELK 159 (904)
T ss_pred ccceeeehhhhhhhhccCCHHHhh----------------hh--hhhccCcccceeeeecc--CceehhHHHh----hhh
Confidence 344555555556665555554332 22 34899999999999995 8999999754 111
Q ss_pred HHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEe
Q 005274 231 SLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEW 310 (704)
Q Consensus 231 ~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~ 310 (704)
+.| .+|+++++ +++|.--+-+...+--.+++|||
T Consensus 160 ETd-----------------------------------------IKHLRkLk-----H~NII~FkGVCtqsPcyCIiMEf 193 (904)
T KOG4721|consen 160 ETD-----------------------------------------IKHLRKLK-----HPNIITFKGVCTQSPCYCIIMEF 193 (904)
T ss_pred hhh-----------------------------------------HHHHHhcc-----CcceeeEeeeecCCceeEEeeec
Confidence 111 23332222 14443333333334456899999
Q ss_pred ccCCChhhHHhh-------hhHH--HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChh-HHHHHHH
Q 005274 311 VEGQKLSEVKDL-------YLIE--VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE-LREGFIE 380 (704)
Q Consensus 311 i~G~~L~d~~~~-------~l~e--~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~-~r~~~~~ 380 (704)
|..+.|..+.+. .++. .+|..++.|||.+.|+|||+|.-||||+.+..|||+|||..+++++. ++..|++
T Consensus 194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG 273 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG 273 (904)
T ss_pred cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence 999999988642 2232 68889999999999999999999999999999999999999988765 3334444
Q ss_pred ----HHHHhhccChhHHHHHHHhcCCC
Q 005274 381 ----ACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 381 ----~~~~l~~~d~~~la~d~~slG~l 403 (704)
+.+.++.+..-.-..|+|+.|++
T Consensus 274 TVaWMAPEvIrnePcsEKVDIwSfGVV 300 (904)
T KOG4721|consen 274 TVAWMAPEVIRNEPCSEKVDIWSFGVV 300 (904)
T ss_pred hHhhhCHHHhhcCCcccccceehhHHH
Confidence 23345555555556677777765
No 376
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.57 E-value=4.1e-14 Score=149.18 Aligned_cols=245 Identities=21% Similarity=0.265 Sum_probs=142.7
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|++|.||+|+.+.+|+.||||+.+..... +-...+..|+..+.
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-------------------------------~~~~~~~~e~~~~~ 68 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-------------------------------EENKRILMDLDVVL 68 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-------------------------------HHHHHHHHHHHHHH
Confidence 36899999999999999888999999998643111 01122333444333
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHH-CCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLE-KGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~-~G~~ 342 (704)
...+...+...++ +.......+++|||+.+ .+.++... ...-.++..++.++|+ .|++
T Consensus 69 ~~~~~~~i~~~~~----------~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 69 KSHDCPYIVKCYG----------YFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred hccCCCchHhhhe----------eeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 3332223333322 23335578899999965 44443221 1133567788999997 6999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHH
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQN 422 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~ 422 (704)
|+|++|.||+++.++.++++|||++..+....... . ...+.++++|+.-... ....
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~----------~-------~~~~~~y~aPE~~~~~-------~~~~ 193 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT----------R-------SAGCAAYMAPERIDPP-------DPNP 193 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCCccc----------C-------CCCCccccCHhhcCCC-------CCcc
Confidence 99999999999999999999999987654321100 0 0011233333311000 0001
Q ss_pred HhhccCCccCHHhHHHHHHHHHhhcCCCC-ChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 423 AVAKGVRNISFGDLLGNLGATMYKFKFRI-PSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 423 ~~~~~~~~~s~~~i~~~L~~~~~~~~~~i-P~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
.++...|.|++|.++.++... +.++.. +..+..+.+ .++.+...+ |. ....+++++++
T Consensus 194 ~~~~~~Di~slG~il~el~~g--~~p~~~~~~~~~~~~~----------~~~~~~~~~----~~-----~~~~~~~l~~l 252 (296)
T cd06618 194 KYDIRADVWSLGISLVELATG--QFPYKNCKTEFEVLTK----------ILQEEPPSL----PP-----NEGFSPDFCSF 252 (296)
T ss_pred ccccchhHHHHHHHHHHHHhC--CCCCCcchhHHHHHHH----------HhcCCCCCC----CC-----CCCCCHHHHHH
Confidence 122234667777777666542 222221 111211111 111111100 10 01357789999
Q ss_pred HHHhhhccccCCCCHHHHHhhhhH
Q 005274 502 LVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 502 L~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+.++|.+||..|.+..+.+.|+.+
T Consensus 253 i~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 253 VDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred HHHHccCChhhCCCHHHHhcChhh
Confidence 999999999999999888888765
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.57 E-value=9.6e-15 Score=149.29 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=86.0
Q ss_pred cccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHH
Q 005274 200 ASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGL 279 (704)
Q Consensus 200 GS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~ 279 (704)
|++|.||+|+.+.+|+.||+|+.+..... .+| ....
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~-------------------------------------~~~------~~~~- 39 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY-------------------------------------SRE------RLTI- 39 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh-------------------------------------hhH------HHHH-
Confidence 88999999999999999999998643100 001 0000
Q ss_pred HHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hh-------HHHHHHHHHHHHHHCCccccCCCCCc
Q 005274 280 KFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YL-------IEVGVYCSFNQLLEKGFYHADPHPGN 350 (704)
Q Consensus 280 ~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l-------~e~~v~~~L~qLh~~G~~H~DphPgN 350 (704)
.. ..++++.--.-+.......+++|||++|++|.+.... .+ .-.++..++.++|+.|++|+|+||.|
T Consensus 40 --~~--~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~N 115 (237)
T cd05576 40 --IP--HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNN 115 (237)
T ss_pred --Hh--cCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 00 0112222111122334567899999999999776421 11 12466778999999999999999999
Q ss_pred EEEecCCcEEEEecCCccccC
Q 005274 351 LFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 351 ILv~~dG~l~liDFGl~~~l~ 371 (704)
|+++.+|.++++|||....+.
T Consensus 116 il~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 116 ILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred EEEcCCCCEEEecccchhccc
Confidence 999999999999999876554
No 378
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.57 E-value=4.9e-14 Score=147.35 Aligned_cols=134 Identities=17% Similarity=0.174 Sum_probs=92.9
Q ss_pred ccccccccceEEEEEEc-----cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-----QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-----~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.||.|+||.||+|... .++..||+|+...... .....+.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~--------------------------------~~~~~~~~e~ 58 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE--------------------------------SARQDFQREA 58 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH--------------------------------HHHHHHHHHH
Confidence 57999999999999753 2467899998653211 0112233444
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------------------hH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------------------LI 325 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------------------l~ 325 (704)
..+....| +++.-..-+.......+++|||++|++|.++.... ..
T Consensus 59 ~~l~~l~h-----------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (280)
T cd05092 59 ELLTVLQH-----------QHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAI 127 (280)
T ss_pred HHHhcCCC-----------CCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHH
Confidence 44433332 33332222344456789999999999998764210 11
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 326 EVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 326 e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
-.++..++.+||+.|++|+|+||+||+++.++.++++|||++..+.
T Consensus 128 ~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 173 (280)
T cd05092 128 ASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 173 (280)
T ss_pred HHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcC
Confidence 1466678899999999999999999999999999999999987653
No 379
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.57 E-value=4.7e-14 Score=145.88 Aligned_cols=146 Identities=21% Similarity=0.237 Sum_probs=97.5
Q ss_pred ccccccccceEEEEEEcc-CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+.||+|++|.||+|+++. +++.||||..+.........+ ...+.....+..|+..+.
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~----------------------~~~~~~~~~~~~e~~~l~ 63 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDK----------------------RERDKSIGDIVSEVTIIK 63 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccccc----------------------ccchHHHHHHHHHHHHHh
Confidence 469999999999999986 678999998764321100000 000011122333443333
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHHHH-C
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQLLE-K 339 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qLh~-~ 339 (704)
.. .+++++.-+.-+.......+++|||++|++|.+.... .+ .-.++..++.++|. .
T Consensus 64 ~~----------~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 133 (269)
T cd08528 64 EQ----------LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK 133 (269)
T ss_pred hc----------CCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 21 1234544444444556788999999999999876421 11 11466778899995 7
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|++|+|++|.||+++.++.++++|||++.....
T Consensus 134 ~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 166 (269)
T cd08528 134 RIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP 166 (269)
T ss_pred ceeecCCCHHHEEECCCCcEEEecccceeeccc
Confidence 899999999999999999999999999886554
No 380
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.57 E-value=3.8e-15 Score=147.20 Aligned_cols=167 Identities=23% Similarity=0.335 Sum_probs=113.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||.|++|||-+-++..+|...|||-++-.+. +...+++..|+|..+.
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn-------------------------------~q~q~r~L~dldi~~r 100 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-------------------------------SQEQKRLLMDLDIIMR 100 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcC-------------------------------hHHHHHHHHhhhhhcc
Confidence 359999999999999999999999998764322 1233556667766543
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hh-------HHHHHHHHHHHHHH-CC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YL-------IEVGVYCSFNQLLE-KG 340 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l-------~e~~v~~~L~qLh~-~G 340 (704)
...+....++|+. .-.+.+.++.||.++ .+++.+... .+ +...+..+|.+||+ -.
T Consensus 101 ~~~CPf~V~FyGa----------~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~ 169 (282)
T KOG0984|consen 101 TVDCPFTVHFYGA----------LFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS 169 (282)
T ss_pred CCCCCeEEEeehh----------hhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh
Confidence 3322111111111 112678899999994 466665321 11 12455667889997 49
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHH-----HHHHh----hccChhHHHHHHHhcCCC
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE-----ACLHL----VNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~-----~~~~l----~~~d~~~la~d~~slG~l 403 (704)
++|||.||+|||++.+|++|+||||.++.+.+..-.++-. +.++. .+...|....|+|++|+.
T Consensus 170 vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 170 VIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred hhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 9999999999999999999999999999987764433211 12222 233456788899999974
No 381
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.57 E-value=8.8e-15 Score=162.84 Aligned_cols=233 Identities=19% Similarity=0.246 Sum_probs=139.3
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.++||+|+||.||||+++ | .||||+..-. ...++-.+.+..|+..++
T Consensus 397 ~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~------------------------------~pt~~qlqaFKnEVa~lk 443 (678)
T KOG0193|consen 397 GERIGSGSFGTVYRGRWH--G-DVAVKLLNVD------------------------------DPTPEQLQAFKNEVAVLK 443 (678)
T ss_pred cceeccccccceeecccc--c-ceEEEEEecC------------------------------CCCHHHHHHHHHHHHHHh
Confidence 468999999999999996 3 5999997521 112234455556666555
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~ 341 (704)
.-+|. + |.. +..++ ....+|+.||+|-+|...... ..+..++..++.|||..+|
T Consensus 444 kTRH~-N----------IlL---FMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I 509 (678)
T KOG0193|consen 444 KTRHE-N----------ILL---FMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI 509 (678)
T ss_pred hcchh-h----------hee---eehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh
Confidence 55551 1 111 11122 234799999999999876431 2344788899999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHH
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~ 421 (704)
+|+|+|.-||++.++++|+|.|||+++.-.. +.++.. +..--.++-+++||+-+ +.+ +
T Consensus 510 IHrDLKSnNIFl~~~~kVkIgDFGLatvk~~-------------w~g~~q-~~qp~gsilwmAPEvIR------mqd--~ 567 (678)
T KOG0193|consen 510 IHRDLKSNNIFLHEDLKVKIGDFGLATVKTR-------------WSGEQQ-LEQPHGSLLWMAPEVIR------MQD--D 567 (678)
T ss_pred hhhhccccceEEccCCcEEEecccceeeeee-------------eccccc-cCCCccchhhhcHHHHh------hcc--c
Confidence 9999999999999999999999999874221 011100 00000112233333211 000 1
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSS 501 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~l 501 (704)
..+...-|.++||.+..+|+.....|....+..+...+ =.|. +-|+.. ....+...+++++
T Consensus 568 nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV-----GrG~---l~pd~s-----------~~~s~~pk~mk~L 628 (678)
T KOG0193|consen 568 NPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV-----GRGY---LMPDLS-----------KIRSNCPKAMKRL 628 (678)
T ss_pred CCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe-----cccc---cCccch-----------hhhccCHHHHHHH
Confidence 22344456788888888888765555544443321110 0110 112211 1122334478899
Q ss_pred HHHhhhccccCCC
Q 005274 502 LVALLYKEGVFRI 514 (704)
Q Consensus 502 L~~lL~~d~~~R~ 514 (704)
|...+.++++-|.
T Consensus 629 l~~C~~~~~~eRP 641 (678)
T KOG0193|consen 629 LSDCWKFDREERP 641 (678)
T ss_pred HHHHHhcCcccCc
Confidence 9888888888774
No 382
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.56 E-value=1e-13 Score=144.08 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=57.3
Q ss_pred ccceeEEEEeccCCChhhHHhhh-------------hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCc
Q 005274 301 TTRKVLIMEWVEGQKLSEVKDLY-------------LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMM 367 (704)
Q Consensus 301 ss~~vLVmE~i~G~~L~d~~~~~-------------l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~ 367 (704)
....++||||++|++|.++.... ..-.++..++.++|+.|++|+|+||.||+++.++.++++|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~ 146 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIG 146 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccc
Confidence 45678999999999998764320 11246777899999999999999999999999999999999987
Q ss_pred cc
Q 005274 368 GE 369 (704)
Q Consensus 368 ~~ 369 (704)
..
T Consensus 147 ~~ 148 (268)
T cd05086 147 PS 148 (268)
T ss_pred cc
Confidence 54
No 383
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.56 E-value=1.3e-13 Score=142.60 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=92.5
Q ss_pred ccccccccceEEEEEEcc---CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ---SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~---tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
+.||.|++|.||+|.++. +|+.||||+...+.... .-.+.+.+|+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~E~~~ 54 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS------------------------------SDIEEFLREAAC 54 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh------------------------------HHHHHHHHHHHH
Confidence 579999999999998753 57899999987543211 111234455555
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeec-----c---cceeEEEEeccCCChhhHHhh---------------hhHHHH
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQ-----T---TRKVLIMEWVEGQKLSEVKDL---------------YLIEVG 328 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~-----s---s~~vLVmE~i~G~~L~d~~~~---------------~l~e~~ 328 (704)
+.+.+| +++ .+.+... . ...++++||..++++.++... .-.-.+
T Consensus 55 l~~l~h-----------~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 121 (273)
T cd05074 55 MKEFDH-----------PNV--IKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMID 121 (273)
T ss_pred HhcCCC-----------CCc--ceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHH
Confidence 555544 221 1122111 1 123688999999988765311 112256
Q ss_pred HHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 329 VYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 329 v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+..++.++|+.|++|+|+||.||+++.++.++++|||.+..+.
T Consensus 122 i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~ 164 (273)
T cd05074 122 IASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY 164 (273)
T ss_pred HHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccccccc
Confidence 7778999999999999999999999999999999999988654
No 384
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.56 E-value=2e-14 Score=149.66 Aligned_cols=143 Identities=20% Similarity=0.287 Sum_probs=107.9
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
++++|. +..+-+|+|.+|.|-.++...||.++|||++.+.- -....+
T Consensus 75 F~d~Yk-Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--------------------------------gHsR~R 121 (463)
T KOG0607|consen 75 FEDMYK-LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--------------------------------GHSRSR 121 (463)
T ss_pred HHHHHH-hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--------------------------------chHHHH
Confidence 344443 44568999999999999998999999999975320 133468
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQ 335 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~q 335 (704)
+++|++.....+...++.+++. +++..++.|||||-+.|++|-.-... ..+-..+..+|..
T Consensus 122 vfREVe~f~~Cqgh~nilqLie----------fFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdF 191 (463)
T KOG0607|consen 122 VFREVETFYQCQGHKNILQLIE----------FFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDF 191 (463)
T ss_pred HHHHHHHHHHhcCCccHHHHHH----------HhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHH
Confidence 8899988887765555555543 34457889999999999998664321 2233677889999
Q ss_pred HHHCCccccCCCCCcEEEecCC---cEEEEecCCcccc
Q 005274 336 LLEKGFYHADPHPGNLFRSYDG---KLAYIDFGMMGEF 370 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG---~l~liDFGl~~~l 370 (704)
||..||.|||+||+|||-.... -+|||||-+...+
T Consensus 192 lH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~ 229 (463)
T KOG0607|consen 192 LHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI 229 (463)
T ss_pred HhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence 9999999999999999975443 4899999887654
No 385
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.55 E-value=2.5e-14 Score=151.78 Aligned_cols=130 Identities=15% Similarity=0.103 Sum_probs=91.7
Q ss_pred ccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 005274 201 SLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLK 280 (704)
Q Consensus 201 S~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~ 280 (704)
+.|.||.++.+.+|+.||||+.+.+... .+-...+..|+..++..+| .+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~------------------------------~~~~~~~~~Ei~~l~~l~h-~~ 60 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCS------------------------------KEDLKLLQQEIITSRQLQH-PN 60 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccc------------------------------hhHHHHHHHHHHHHHhcCC-cc
Confidence 4455555555568999999998643111 1122456677777776665 23
Q ss_pred HHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 281 FRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 281 f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
+...++ ++......+++|||++++.+.++... ...-.++..++.+||+.|++|+|+||+
T Consensus 61 i~~~~~----------~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~ 130 (314)
T cd08216 61 ILPYVT----------SFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKAS 130 (314)
T ss_pred hhhhhh----------eeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcc
Confidence 333222 23335667999999999999876432 112257788899999999999999999
Q ss_pred cEEEecCCcEEEEecCCccccC
Q 005274 350 NLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 350 NILv~~dG~l~liDFGl~~~l~ 371 (704)
||+++.+|.+++.|||.+..+.
T Consensus 131 Nili~~~~~~kl~d~~~~~~~~ 152 (314)
T cd08216 131 HILLSGDGKVVLSGLRYSVSMI 152 (314)
T ss_pred eEEEecCCceEEecCccceeec
Confidence 9999999999999999887653
No 386
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.55 E-value=4.4e-14 Score=146.58 Aligned_cols=134 Identities=16% Similarity=0.201 Sum_probs=92.9
Q ss_pred ccccccccceEEEEEEccC-----CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-----GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-----G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+-||.|+||.||+|+.+.+ .+.|++|+....-. ++....+.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------------------------------~~~~~~~~~E~ 59 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-------------------------------ENLQSEFRREL 59 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-------------------------------hHHHHHHHHHH
Confidence 4599999999999997643 46799998653211 01223344455
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------h-------hHHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------Y-------LIEVGVYC 331 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~-------l~e~~v~~ 331 (704)
..++..+| +++.-..-+.......++||||++|++|.++... . ..-.++..
T Consensus 60 ~~l~~l~h-----------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 128 (275)
T cd05046 60 DMFRKLSH-----------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128 (275)
T ss_pred HHHHhcCC-----------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHH
Confidence 55444433 3322111123334567999999999999876431 1 11256777
Q ss_pred HHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 332 SFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 332 ~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
++.+||+.|++|+|+||.||+++.++.+++.|||++...
T Consensus 129 ~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~ 167 (275)
T cd05046 129 GMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDV 167 (275)
T ss_pred HHHHhhhcCcccCcCccceEEEeCCCcEEEccccccccc
Confidence 899999999999999999999999999999999997644
No 387
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.54 E-value=3e-14 Score=168.10 Aligned_cols=137 Identities=20% Similarity=0.314 Sum_probs=100.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.|+||.||+|++..+|+.||||+.+..... -......+..|++.+..
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~-----------------------------~~~~~~~~~~E~~~l~~ 60 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI-----------------------------NKNMVHQVQAERDALAL 60 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc-----------------------------CHHHHHHHHHHHHHHHh
Confidence 6799999999999999989999999998632100 01122334455555444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+| +++.-...........++||||++|+.|.++... ..+-.++..+|.+||..||+|+|
T Consensus 61 l~h-----------p~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD 129 (669)
T cd05610 61 SKS-----------PFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRD 129 (669)
T ss_pred cCC-----------CCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence 333 3333323334455678999999999999887532 12235677889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+||.|||++.+|.++|+|||+++...
T Consensus 130 LKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 130 LKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred ccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 99999999999999999999998654
No 388
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=2.5e-14 Score=157.64 Aligned_cols=248 Identities=15% Similarity=0.188 Sum_probs=153.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||+|+-..||++..- +.+.+|+|...-. ..-+.....+..|+.|+..
T Consensus 367 k~iG~GGSSkV~kV~~s-~~~iyalkkv~~~------------------------------~~D~qtl~gy~nEI~lL~K 415 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNS-DKQIYALKKVVLL------------------------------EADNQTLDGYRNEIALLNK 415 (677)
T ss_pred HhhcCCCcceeeeeecC-CCcchhhhHHHHh------------------------------hcCHHHHHHHHHHHHHHHH
Confidence 56999999999999874 5566777753210 0112233455677777766
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
.+.. ..|+-..-|.-..+..||||||= ..+|..+... +.+-.++..+++.+|++||+|.
T Consensus 416 Lkg~----------~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHS 484 (677)
T KOG0596|consen 416 LKGH----------DKIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHS 484 (677)
T ss_pred hcCC----------ceEEEEeeeeccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeec
Confidence 5542 33333333444466789999985 4578777542 2333677778889999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH-HHH--
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG-VFQ-- 421 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~-v~~-- 421 (704)
|+||.|+|+ -+|.+||+|||.+..+.+++..-+ ++ .-+.+..|++||+-.. .-.. --+
T Consensus 485 DLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~---------kd-----sQvGT~NYMsPEAl~~----~~s~~~~~~~ 545 (677)
T KOG0596|consen 485 DLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV---------KD-----SQVGTVNYMSPEALTD----MSSSRENGKS 545 (677)
T ss_pred CCCcccEEE-EeeeEEeeeechhcccCcccccee---------ec-----cccCcccccCHHHHhh----ccccccCCCc
Confidence 999999987 579999999999998877653211 11 1133455666553211 0000 000
Q ss_pred -HHhhccCCccCHHhHHHHHHHHHhhcCCCCChh--HHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHH
Q 005274 422 -NAVAKGVRNISFGDLLGNLGATMYKFKFRIPSY--FSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQL 498 (704)
Q Consensus 422 -~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~--~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~l 498 (704)
-..+.+-|.||+|||+.+|.- .-||+ +...+ --+-...||+-.| -+|++ ....++
T Consensus 546 k~Ki~r~SDvWSLGCILYqMvY-------gktPf~~~~n~~------aKl~aI~~P~~~I---efp~~------~~~~~l 603 (677)
T KOG0596|consen 546 KIKISRKSDVWSLGCILYQMVY-------GKTPFGQIINQI------AKLHAITDPNHEI---EFPDI------PENDEL 603 (677)
T ss_pred ceeecCccchhhhhhHHHHHHh-------cCCchHHHHHHH------HHHHhhcCCCccc---cccCC------CCchHH
Confidence 012345578888888766542 33332 22111 1223446787654 23432 112239
Q ss_pred HHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 499 KSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
.++++..|..||++||+--|-|-|+.+
T Consensus 604 i~~mK~CL~rdPkkR~si~eLLqhpFl 630 (677)
T KOG0596|consen 604 IDVMKCCLARDPKKRWSIPELLQHPFL 630 (677)
T ss_pred HHHHHHHHhcCcccCCCcHHHhcCccc
Confidence 999999999999999998887778764
No 389
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=2.3e-14 Score=156.99 Aligned_cols=177 Identities=20% Similarity=0.265 Sum_probs=119.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.-||.|+||.||+|.+. +|..||||...++.... .+.+..|+.++.-
T Consensus 81 ~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--------------------------------~~eF~~Ei~~ls~ 127 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--------------------------------EREFLNEVEILSR 127 (361)
T ss_pred cceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--------------------------------hhHHHHHHHHHhc
Confidence 57999999999999997 77999999776542210 0113344444443
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeeccc-ceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCC--
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTT-RKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKG-- 340 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss-~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G-- 340 (704)
.+| ++++--.-|....+ .++||.||+++++|.+.... --+..++..++.|||+..
T Consensus 128 l~H-----------~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~ 196 (361)
T KOG1187|consen 128 LRH-----------PNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPP 196 (361)
T ss_pred CCC-----------cCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCC
Confidence 333 45444444555555 49999999999999876321 124478888999999854
Q ss_pred -ccccCCCCCcEEEecCCcEEEEecCCccccCh-hHHHHHHHHHHHhhccChhHHHHH-HHhcCCCCCccchHHHHHHHH
Q 005274 341 -FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE-ELREGFIEACLHLVNRDFDALAKD-FVTLGLLPPTAEKEAVTKALT 417 (704)
Q Consensus 341 -~~H~DphPgNILv~~dG~l~liDFGl~~~l~~-~~r~~~~~~~~~l~~~d~~~la~d-~~slG~l~p~~d~~~i~~~L~ 417 (704)
++|||+||.|||++.+.+.|++|||+++..+. .... ... ..+.|+++|+....
T Consensus 197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~-----------------~~~~~gt~gY~~PEy~~~------- 252 (361)
T KOG1187|consen 197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV-----------------STTVMGTFGYLAPEYAST------- 252 (361)
T ss_pred CEecCCCCHHHeeECCCCCEEccCccCcccCCccccce-----------------eeecCCCCccCChhhhcc-------
Confidence 99999999999999999999999999966543 2110 000 33466666653211
Q ss_pred HHHHHHhhccCCccCHHhHHHHHHHH
Q 005274 418 GVFQNAVAKGVRNISFGDLLGNLGAT 443 (704)
Q Consensus 418 ~v~~~~~~~~~~~~s~~~i~~~L~~~ 443 (704)
..++...|.++||-++-++...
T Consensus 253 ----g~lt~KsDVySFGVvllElitg 274 (361)
T KOG1187|consen 253 ----GKLTEKSDVYSFGVVLLELITG 274 (361)
T ss_pred ----CCcCcccccccchHHHHHHHhC
Confidence 2234455677788777676543
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.53 E-value=3.1e-14 Score=163.84 Aligned_cols=175 Identities=18% Similarity=0.309 Sum_probs=123.7
Q ss_pred ChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHH
Q 005274 184 PIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWAS 263 (704)
Q Consensus 184 ~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~ 263 (704)
.+.+.|+-+ +.||.|.+|+||+++.+++|+.+|||++.|+.... +
T Consensus 16 dp~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d---------------------------------e 60 (953)
T KOG0587|consen 16 DPADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE---------------------------------E 60 (953)
T ss_pred CCCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCcccc---------------------------------H
Confidence 456677655 56999999999999999999999999999875321 1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeee-----cccceeEEEEeccCCChhhHHhh----h-------hHHH
Q 005274 264 SLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVE-----QTTRKVLIMEWVEGQKLSEVKDL----Y-------LIEV 327 (704)
Q Consensus 264 ~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e-----~ss~~vLVmE~i~G~~L~d~~~~----~-------l~e~ 327 (704)
.+..|. ++...+.+++++..-..+.. -....|||||||.|++++|+.+. + .+..
T Consensus 61 EiE~ey----------nil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~r 130 (953)
T KOG0587|consen 61 EIELEY----------NMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILR 130 (953)
T ss_pred HHHHHH----------HHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHH
Confidence 111121 22344555666543333222 24568999999999999998642 1 2335
Q ss_pred HHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhH--HHHHHH--HHHH--hhc--cCh---hHHHHH
Q 005274 328 GVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL--REGFIE--ACLH--LVN--RDF---DALAKD 396 (704)
Q Consensus 328 ~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~--r~~~~~--~~~~--l~~--~d~---~~la~d 396 (704)
.+..++.+||.+.++|||+|-.|||++.+|.+|++|||...+++... |.++++ +|++ ++. .++ +..-.|
T Consensus 131 e~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D 210 (953)
T KOG0587|consen 131 EILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSD 210 (953)
T ss_pred HHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccc
Confidence 66678899999999999999999999999999999999999987653 333333 2222 222 111 235678
Q ss_pred HHhcCCC
Q 005274 397 FVTLGLL 403 (704)
Q Consensus 397 ~~slG~l 403 (704)
.|++|+.
T Consensus 211 ~WsLGIT 217 (953)
T KOG0587|consen 211 LWSLGIT 217 (953)
T ss_pred hhhccce
Confidence 9999986
No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.53 E-value=1.9e-14 Score=154.73 Aligned_cols=134 Identities=19% Similarity=0.322 Sum_probs=100.5
Q ss_pred ccccccccceEEEEEEcc---CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ---SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~---tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
++||+|+|+.||+|++.. .++.||+|-+++-. -..++..|+.+
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----------------------------------~p~ri~~El~~ 87 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----------------------------------SPSRILNELEM 87 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeeccccc----------------------------------CchHHHHHHHH
Confidence 679999999999999986 67899999876421 11356778888
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-hhHH-----HHHHHHHHHHHHCCccccC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-YLIE-----VGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~l~e-----~~v~~~L~qLh~~G~~H~D 345 (704)
+.++.-..++..+.....+ .+..++||||.+.....++... .+.+ ..+..+|.++|..||+|||
T Consensus 88 L~~~gG~~ni~~~~~~~rn----------nd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRD 157 (418)
T KOG1167|consen 88 LYRLGGSDNIIKLNGCFRN----------NDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRD 157 (418)
T ss_pred HHHhccchhhhcchhhhcc----------CCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccC
Confidence 8887655555554443333 5677899999998888776432 2222 3445678899999999999
Q ss_pred CCCCcEEEec-CCcEEEEecCCccccCh
Q 005274 346 PHPGNLFRSY-DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 346 phPgNILv~~-dG~l~liDFGl~~~l~~ 372 (704)
+||+|+|.+. .++-.++|||++...+.
T Consensus 158 iKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 158 IKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred CCccccccccccCCceEEechhHHHHHh
Confidence 9999999974 57889999999986433
No 392
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.52 E-value=1e-13 Score=142.67 Aligned_cols=138 Identities=14% Similarity=0.158 Sum_probs=91.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||+|++|.||+|+...++..+++|+.+........ ..-......|...+..
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~e~~~l~~ 58 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELN---------------------------PNETVQANQEAQLLSK 58 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccC---------------------------cchHHHHHHHHHHHHh
Confidence 5799999999999999877888888886532111000 0001123344444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-------------hhHHHHHHHHHHHHHHCCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-------------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-------------~l~e~~v~~~L~qLh~~G~ 341 (704)
.+| ..+.+.+ .+....+..+++|||++|++|.+.... ...-.++..++.++|+.|+
T Consensus 59 l~h-~~i~~~~----------~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 127 (260)
T cd08222 59 LDH-PAIVKFH----------ASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI 127 (260)
T ss_pred CCC-CcHHHHH----------HHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 433 1222221 122234567899999999999875421 1112567788999999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+|+|++|.||+++ ++.++++|||.+..+.
T Consensus 128 ~h~~l~~~nili~-~~~~~l~d~g~~~~~~ 156 (260)
T cd08222 128 LHRDLKAKNIFLK-NNLLKIGDFGVSRLLM 156 (260)
T ss_pred cccCCChhheEee-cCCEeecccCceeecC
Confidence 9999999999996 4779999999886543
No 393
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.52 E-value=5.4e-14 Score=157.00 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=131.0
Q ss_pred ccccccccceEEEEEEccCCc---E-EEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR---V-VAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~---~-VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|.||.||+|+++..+. . ||||..+-.. .. .-..-.+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~---------------------------------~~~~~~e 207 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--EL---------------------------------TKEQIKE 207 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc--cc---------------------------------cHHHHHH
Confidence 689999999999999986433 3 8999865200 00 0011125
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----hhH-----HHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----YLI-----EVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----~l~-----e~~v~~~L~qLh~~G 340 (704)
+++||+-+.+ |. +++|+--.-+.-.....++|||+|.|+.|.++... .+. -.++.++|.|||..+
T Consensus 208 ~m~EArvMr~----l~-H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~ 282 (474)
T KOG0194|consen 208 FMKEARVMRQ----LN-HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN 282 (474)
T ss_pred HHHHHHHHHh----CC-CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC
Confidence 6777776543 32 36665555555667889999999999999988542 112 257788999999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH-HH-----HHHHHhhccChhHHHHHHHhcCCCCCccchHHHHH
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG-FI-----EACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTK 414 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~-~~-----~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~ 414 (704)
++|||+-..|+|++.++.+|++||||++.-+...... .. -+.+..++...+....|+|+.|++..|+-
T Consensus 283 ~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif------ 356 (474)
T KOG0194|consen 283 CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIF------ 356 (474)
T ss_pred CcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeee------
Confidence 9999999999999999999999999987654221111 11 13355555556667888888888765532
Q ss_pred HHHHHHHHHhhccCCccCHHhHHHHH
Q 005274 415 ALTGVFQNAVAKGVRNISFGDLLGNL 440 (704)
Q Consensus 415 ~L~~v~~~~~~~~~~~~s~~~i~~~L 440 (704)
.+... +...++..++...+
T Consensus 357 ------~~g~~-Py~g~~~~~v~~kI 375 (474)
T KOG0194|consen 357 ------ENGAE-PYPGMKNYEVKAKI 375 (474)
T ss_pred ------ccCCC-CCCCCCHHHHHHHH
Confidence 22112 45566666665555
No 394
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.51 E-value=4.2e-13 Score=139.83 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=93.7
Q ss_pred ccccccccceEEEEEEcc----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+-||+|+||.||+|.... ++..|++|+.+.+... .....+.+|+.
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~-------------------------------~~~~~~~~e~~ 60 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASE-------------------------------IQVTLLLQESC 60 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCH-------------------------------HHHHHHHHHHH
Confidence 569999999999999874 2688999987643211 01122333433
Q ss_pred HHHHHhhHHHHHHHhcCCcceeecee-eeecccceeEEEEeccCCChhhHHhh----------h-------hHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEM-YVEQTTRKVLIMEWVEGQKLSEVKDL----------Y-------LIEVGVYCS 332 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v-~~e~ss~~vLVmE~i~G~~L~d~~~~----------~-------l~e~~v~~~ 332 (704)
.++... ++++.-+.- ..+.....++++||+++++|.++... . ..-.++..+
T Consensus 61 ~l~~l~-----------h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~ 129 (280)
T cd05043 61 LLYGLS-----------HQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACG 129 (280)
T ss_pred HHHhCC-----------CCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHH
Confidence 333222 234322222 22224567899999999998876421 0 122467788
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+.+||+.|++|+|++|.||+++.++.++++|||+++.+.
T Consensus 130 l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~ 168 (280)
T cd05043 130 MSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLF 168 (280)
T ss_pred HHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCccccc
Confidence 999999999999999999999999999999999988654
No 395
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.51 E-value=6.8e-14 Score=146.37 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=59.6
Q ss_pred ccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 301 TTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 301 ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
....+++|||+++++|.+.... ...-.++..++.++|+.|++|+|+||.||+++.+++++++|||+++.+
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 3456799999999999887532 112257778899999999999999999999999999999999998765
Q ss_pred Ch
Q 005274 371 KE 372 (704)
Q Consensus 371 ~~ 372 (704)
.+
T Consensus 160 ~~ 161 (279)
T cd05111 160 YP 161 (279)
T ss_pred cC
Confidence 43
No 396
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.51 E-value=5.9e-14 Score=148.79 Aligned_cols=135 Identities=14% Similarity=0.127 Sum_probs=93.0
Q ss_pred ccccccccceEEEEEEccCCc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+.||+|++|+||+|+.+.+|+ .||+|+..+.... .....+.+|+.
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~-------------------------------~~~~~~~~e~~ 61 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP-------------------------------KANVEFMDEAL 61 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH-------------------------------HHHHHHHHHHH
Confidence 579999999999999887886 4688887643211 00112333444
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh----------hHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY----------LIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~----------l~e~~v~~~L~qLh~~G 340 (704)
.+....| +++.-..-+. .....+++|||++++.+.+..... ..-.++..++.+||+.|
T Consensus 62 ~~~~l~h-----------~niv~~~~~~-~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 129 (303)
T cd05110 62 IMASMDH-----------PHLVRLLGVC-LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 129 (303)
T ss_pred HHHhCCC-----------CCcccEEEEE-cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 4333332 3322111111 234567999999999988774321 11257778899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
++|+|+||+||+++.++.++++|||++..+..
T Consensus 130 ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999999999999999999986643
No 397
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.48 E-value=4.3e-13 Score=154.49 Aligned_cols=142 Identities=20% Similarity=0.242 Sum_probs=98.8
Q ss_pred cCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHH-HHHHHHHHHH
Q 005274 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDE-WASSLFRELD 270 (704)
Q Consensus 192 ~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde-~~~~l~~Eld 270 (704)
...+.||+|++|.||+|.+ .+..+++|+..+.....- .+-+. ..+.+.+|..
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~--~~~~~v~k~~~~~~~~~~-------------------------~~~~~~~~~~~~~E~~ 388 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEY--LGRDAVIKERVPKGYRHP-------------------------ELDERLRTERTRAEAR 388 (535)
T ss_pred CccceeccCCcEEEEEEee--cCccceeEEEecccccch-------------------------hHHHHHHHHHHHHHHH
Confidence 4467899999999999987 456677776543211100 00000 1122334444
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-hhHHHHHHHHHHHHHHCCccccCCCCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-YLIEVGVYCSFNQLLEKGFYHADPHPG 349 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~l~e~~v~~~L~qLh~~G~~H~DphPg 349 (704)
+++..++ +++.+|.++.......++||||++|++|.+.... ...-.++..++.++|+.|++|+|+||+
T Consensus 389 ~l~~l~~-----------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~ 457 (535)
T PRK09605 389 LLSEARR-----------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTS 457 (535)
T ss_pred HHHhhcc-----------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChH
Confidence 4333322 4567777777667788999999999999887531 222356778899999999999999999
Q ss_pred cEEEecCCcEEEEecCCccccCh
Q 005274 350 NLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 350 NILv~~dG~l~liDFGl~~~l~~ 372 (704)
||++ .+++++++|||+++....
T Consensus 458 NILl-~~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 458 NFIV-RDDRLYLIDFGLGKYSDL 479 (535)
T ss_pred HEEE-ECCcEEEEeCcccccCCc
Confidence 9999 688999999999987554
No 398
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.47 E-value=1.2e-12 Score=130.90 Aligned_cols=131 Identities=25% Similarity=0.444 Sum_probs=93.4
Q ss_pred ccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 005274 201 SLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLK 280 (704)
Q Consensus 201 S~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~ 280 (704)
++|+||+|+...+|+.||+|+.+.+.... ..+.+.+|+..++..+| ..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------~~~~~~~e~~~~~~l~~-~~ 48 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK-------------------------------KRERILREISILKKLKH-PN 48 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc-------------------------------HHHHHHHHHHHHHhCCC-Cc
Confidence 58999999998889999999987543211 02344455555554433 22
Q ss_pred HHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---------hHHHHHHHHHHHHHHCCccccCCCCCcE
Q 005274 281 FRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY---------LIEVGVYCSFNQLLEKGFYHADPHPGNL 351 (704)
Q Consensus 281 f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~---------l~e~~v~~~L~qLh~~G~~H~DphPgNI 351 (704)
+...++ +.......+++|||+++++|.++.... ..-.++..++.+||..|++|+|++|+||
T Consensus 49 i~~~~~----------~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni 118 (244)
T smart00220 49 IVRLYD----------VFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENI 118 (244)
T ss_pred HHHHHh----------heeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHe
Confidence 222222 122236788999999998988764320 1224566788999999999999999999
Q ss_pred EEecCCcEEEEecCCccccChh
Q 005274 352 FRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 352 Lv~~dG~l~liDFGl~~~l~~~ 373 (704)
+++.+|.++++|||.+......
T Consensus 119 ~~~~~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 119 LLDEDGHVKLADFGLARQLDPG 140 (244)
T ss_pred EECCCCcEEEccccceeeeccc
Confidence 9999999999999999877653
No 399
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.47 E-value=1.7e-13 Score=138.33 Aligned_cols=130 Identities=23% Similarity=0.393 Sum_probs=94.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.+||+||||-+|.|..-.+|+.||||+-+..++.. + +..|
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp----------------------------------q------L~yE 60 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP----------------------------------Q------LLYE 60 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCCc----------------------------------c------hhHH
Confidence 68999999999999999999999999976543320 1 1122
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeeccc--ceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTT--RKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss--~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
++- -+.+. ..+-+|.+++-.+. ..|||||.. |.+|.++... -+..-++..-++++|..+|+
T Consensus 61 skv----Y~iL~--~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fi 133 (341)
T KOG1163|consen 61 SKV----YRILQ--GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFI 133 (341)
T ss_pred HHH----HHHhc--cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccc
Confidence 221 22222 34557777665544 457999999 9999987431 12334566678999999999
Q ss_pred ccCCCCCcEEEe---cCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRS---YDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~---~dG~l~liDFGl~~~l~ 371 (704)
|||+||+|+|.. ...++.++|||+++..-
T Consensus 134 HRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 134 HRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred cccCCccceeeccccccceEEEEeccchhhhc
Confidence 999999999974 44679999999998754
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.46 E-value=2.3e-14 Score=160.62 Aligned_cols=144 Identities=22% Similarity=0.359 Sum_probs=108.5
Q ss_pred hhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHH
Q 005274 185 IDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASS 264 (704)
Q Consensus 185 ~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~ 264 (704)
+.+-|+-+ .-||+|++|-||||+++.+|+.+|||+++-.-.+ | -+.
T Consensus 13 P~ddyell--qrvgsgTygdvyKaRd~~s~elaavkvVkLep~d------------------------d--------~~~ 58 (829)
T KOG0576|consen 13 PQDDYELL--QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD------------------------D--------FSG 58 (829)
T ss_pred Cccchhhe--eeecCCcccchhhhcccccCchhhheeeeccCCc------------------------c--------ccc
Confidence 34444444 4699999999999999999999999997622111 1 134
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--hhHH-------HHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--YLIE-------VGVYCSFNQ 335 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--~l~e-------~~v~~~L~q 335 (704)
+.+|+-.++|.+| .++..+|+.... -.+.+++||||.|+.|.+.... .+.+ .....++++
T Consensus 59 iqqei~~~~dc~h-~nivay~gsylr----------~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~y 127 (829)
T KOG0576|consen 59 IQQEIGMLRDCRH-PNIVAYFGSYLR----------RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKY 127 (829)
T ss_pred cccceeeeecCCC-cChHHHHhhhhh----------hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchh
Confidence 4567777788887 455555554333 4578999999999999987432 2222 344567899
Q ss_pred HHHCCccccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 336 LLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
+|+.|=+|||+|-+||+++..|.+++.|||.+++++..
T Consensus 128 lhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 128 LHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred hhcCCcccccccccceeecccCceeecccCchhhhhhh
Confidence 99999999999999999999999999999999987653
No 401
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.46 E-value=3.6e-13 Score=160.39 Aligned_cols=133 Identities=23% Similarity=0.297 Sum_probs=104.5
Q ss_pred ccccccccceEEEEEEccC-Cc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-GR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-G~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
..||.|.||.||+|..... |. .||||..++.- ...++.
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-------------------------------------~~~~~~ 740 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-------------------------------------SEQEVS 740 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccC-------------------------------------CHHHHH
Confidence 5899999999999998642 33 38999877542 234567
Q ss_pred HHHHHHhhHHHHHHHhcCCcceee-ceeeeecccceeEEEEeccCCChhhHHhh--------------hhHH--HHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLI-PEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------------YLIE--VGVYCS 332 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~v-P~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------------~l~e--~~v~~~ 332 (704)
+|++||..+.+|.| ++|+- --+..+ .+..++++|||+|++|..+.+. .+.. .++..+
T Consensus 741 ~Fl~Ea~~m~~f~H-----pNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G 814 (1025)
T KOG1095|consen 741 DFLKEALLMSKFDH-----PNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKG 814 (1025)
T ss_pred HHHHHHHHHhcCCC-----cceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhh
Confidence 89999998866653 55443 233333 7788999999999999988642 2322 678889
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
++||++.+||||||-..|+|++....+|+.||||++.+
T Consensus 815 ~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 815 MNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDI 852 (1025)
T ss_pred hHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence 99999999999999999999999999999999999843
No 402
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.45 E-value=4.3e-13 Score=148.58 Aligned_cols=135 Identities=20% Similarity=0.213 Sum_probs=100.5
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|-||.||.|... .+..||||..||+..... .. +|++
T Consensus 543 ~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~-------------------------------r~------~F~k 584 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNA-------------------------------RN------DFLK 584 (807)
T ss_pred hhhhcCcccceeEEEEec-CceEEEEeecCcccchhH-------------------------------HH------HHHH
Confidence 367999999999999995 579999999998753321 12 3444
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-----------hHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-----------LIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-----------l~e~~v~~~L~qLh~~G~~ 342 (704)
|++-+.++ .+|+|+-.--..-.....+++|||++.++|.++...+ -+-.++.++++||-+.+|+
T Consensus 585 EIkiLsqL-----khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfV 659 (807)
T KOG1094|consen 585 EIKILSRL-----KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFV 659 (807)
T ss_pred HHHHHhcc-----CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchh
Confidence 54443332 1255443222222345678999999999999985431 1236888999999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
|||+-|.|+|++.++.+|++||||++.+-
T Consensus 660 Hrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 660 HRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred hccccccceeecCcccEEecCcccccccc
Confidence 99999999999999999999999998653
No 403
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.44 E-value=8.7e-14 Score=159.49 Aligned_cols=134 Identities=21% Similarity=0.251 Sum_probs=98.3
Q ss_pred cCCccccccccc-eEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 192 ISPEPVAAASLG-QVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 192 ~~~~PIgsGS~G-QVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
.+++.+|.|+-| .||+|.. .|+.||||.. +.++.....+|++
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrl-----------------------------------l~e~~~~A~rEi~ 554 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRL-----------------------------------LEEFFDFAQREIQ 554 (903)
T ss_pred ccHHHcccCCCCcEEEEEee--CCceehHHHH-----------------------------------hhHhHHHHHHHHH
Confidence 456788899987 5799998 6999999953 3355667789999
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh-------------hHHHHHHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY-------------LIEVGVYCSFNQLL 337 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-------------l~e~~v~~~L~qLh 337 (704)
.++|-.+. ++|+.-..........|+..|.|. .+|.++.... ..-.++..++.+||
T Consensus 555 lL~eSD~H----------~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH 623 (903)
T KOG1027|consen 555 LLQESDEH----------PNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH 623 (903)
T ss_pred HHHhccCC----------CceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH
Confidence 99988763 444322222222345689999994 4677764321 11256677899999
Q ss_pred HCCccccCCCCCcEEEec---CC--cEEEEecCCccccChh
Q 005274 338 EKGFYHADPHPGNLFRSY---DG--KLAYIDFGMMGEFKEE 373 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~---dG--~l~liDFGl~~~l~~~ 373 (704)
+.+|+|||+||+||||+. +| +.+|.|||+++.+...
T Consensus 624 sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 624 SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 999999999999999975 44 5789999999998754
No 404
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.43 E-value=1.2e-12 Score=132.50 Aligned_cols=134 Identities=16% Similarity=0.087 Sum_probs=90.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHH-HHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEW-ASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~-~~~l~~Eld~l~ 273 (704)
+.+++|+||.||.+.. .|++|+.+...-. ....... ...+.+|+..++
T Consensus 8 ~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~-----------------------------~~~~~~~~~~l~~rE~~iL~ 56 (218)
T PRK12274 8 EPLKSDTFGRILLVRG--GERKFVRRDLSAA-----------------------------PWWLRGVAWWLARREALALR 56 (218)
T ss_pred eeecCCCcceEEEeec--CCceeeecccccc-----------------------------hhhhhhHHHHHHHHHHHHHH
Confidence 5799999999997765 5666665543210 0001111 112345555554
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh--hHHHHHHHHHHHHHHCCccccCC-CCCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY--LIEVGVYCSFNQLLEKGFYHADP-HPGN 350 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~--l~e~~v~~~L~qLh~~G~~H~Dp-hPgN 350 (704)
.+.+ . ..+|+++.- +..+++|||++|..|.+..... -...++..++.++|+.|++|+|+ ||+|
T Consensus 57 ~L~~----------~--~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~N 122 (218)
T PRK12274 57 QLDG----------L--PRTPRLLHW--DGRHLDRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEAN 122 (218)
T ss_pred hcCC----------C--CCCCEEEEE--cCEEEEEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcce
Confidence 4432 1 335666542 5679999999999997653211 12245677899999999999999 7999
Q ss_pred EEEecCCcEEEEecCCccccChh
Q 005274 351 LFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 351 ILv~~dG~l~liDFGl~~~l~~~ 373 (704)
||++++|+++++|||++....+.
T Consensus 123 ILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 123 WLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred EEEcCCCCEEEEECCCceecCCc
Confidence 99999999999999999866543
No 405
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=1.1e-13 Score=151.05 Aligned_cols=167 Identities=22% Similarity=0.317 Sum_probs=122.7
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHH-HHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVD-EWASSLFRELDYKIE 274 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivd-e~~~~l~~Eld~l~E 274 (704)
.+|-|+||.|-..+.+.....+|+|++++. .++| .-.+.++.|-+++.|
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~------------------------------hIVdtkQqeHv~sEr~Im~~ 476 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKK------------------------------HIVDTKQQEHVFSERNIMME 476 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHh------------------------------hccchhHHHHHHhHHHHHHh
Confidence 589999999998887633334677766521 1111 234578888889999
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~H~D 345 (704)
.++ .-+.++|+.+.+ +...|+.||-|=|+.+..+.+. ++.-..+..++.|||.+||+.||
T Consensus 477 ~~s-~fIvrLYrTfrd----------~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRD 545 (732)
T KOG0614|consen 477 CRS-DFIVRLYRTFRD----------SKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRD 545 (732)
T ss_pred cCc-hHHHHHHHHhcc----------chhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceecc
Confidence 886 555666654444 4456789999999999877532 34556777889999999999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhHHH-HHHH----HHHHhhccChhHHHHHHHhcCCC
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEELRE-GFIE----ACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~r~-~~~~----~~~~l~~~d~~~la~d~~slG~l 403 (704)
+||+|++++.+|-+|+.|||+++.+....+. +|++ ..+.++-......+.|+|++|++
T Consensus 546 LKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIl 608 (732)
T KOG0614|consen 546 LKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGIL 608 (732)
T ss_pred CChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHH
Confidence 9999999999999999999999998766543 4554 33444444445578899999975
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.42 E-value=1.8e-13 Score=151.50 Aligned_cols=179 Identities=22% Similarity=0.265 Sum_probs=121.0
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
-.|+|+|.||+|..|.++++...|+||.+.+ +.|-.|- |++. +. + -.+-.|+.++.
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~Dt--------WvrD-rk----L--------GtVp~EIqIla 621 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDT--------WVRD-RK----L--------GTVPSEIQILA 621 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhh---hhhhhhh--------hhcc-cc----c--------CccchhHHHHH
Confidence 3789999999999999999999999999863 3332221 1111 01 1 12344565555
Q ss_pred HHh--hHHHHHHHhcCCcceeeceeeeecccceeEEEEec-cCCChhhHHhh---------hhHHHHHHHHHHHHHHCCc
Q 005274 274 EAK--NGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWV-EGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 274 Ea~--n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i-~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~ 341 (704)
-.+ ..+++.+++. ++|.....+|+||-- +|.+|.++... +++-.++..+.+.||+.||
T Consensus 622 ~l~~~sH~NIlKlLd----------fFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~i 691 (772)
T KOG1152|consen 622 TLNKHSHENILKLLD----------FFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGI 691 (772)
T ss_pred HhhhcCccchhhhhh----------eeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCc
Confidence 443 1133333322 334455677888864 56777777542 2334678888889999999
Q ss_pred cccCCCCCcEEEecCCcEEEEecCCccccChhH----HHHHHHHHHHhhcc-ChhHHHHHHHhcCCCCCc
Q 005274 342 YHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL----REGFIEACLHLVNR-DFDALAKDFVTLGLLPPT 406 (704)
Q Consensus 342 ~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~----r~~~~~~~~~l~~~-d~~~la~d~~slG~l~p~ 406 (704)
+|||+|-+|+.++.+|-++++|||.+......- +.+.-.+.+.++.+ .|.+...|+|.+|++...
T Consensus 692 vhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 692 VHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred eecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 999999999999999999999999987665432 22222344555544 467788999999987543
No 407
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.41 E-value=1.1e-12 Score=160.71 Aligned_cols=238 Identities=13% Similarity=0.085 Sum_probs=137.7
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+.||+|++|.||+|+.+.+|..||||..+..... ...|+..++
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------------------------------------~~~~~~~l~ 738 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------------------------------------PSSEIADMG 738 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------------------------------------cHHHHHHHh
Confidence 35799999999999999889999999987531100 001222222
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hhHHHHHHHHHHHHH---HCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YLIEVGVYCSFNQLL---EKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l~e~~v~~~L~qLh---~~G~~H~ 344 (704)
.. ++++|.-..-+.......++||||++|++|.++... .-+..++..++.++| ..+++||
T Consensus 739 ~l-----------~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~ 807 (968)
T PLN00113 739 KL-----------QHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807 (968)
T ss_pred hC-----------CCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecC
Confidence 22 235544333344445678999999999999887532 123367888999999 6699999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAV 424 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~ 424 (704)
|+||.||+++.++..++. ||..+....... ...+.+|++||.-.. ..+
T Consensus 808 dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~--------------------~~~t~~y~aPE~~~~-----------~~~ 855 (968)
T PLN00113 808 NLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK--------------------CFISSAYVAPETRET-----------KDI 855 (968)
T ss_pred CCCHHhEEECCCCceEEE-eccccccccCCC--------------------ccccccccCcccccC-----------CCC
Confidence 999999999988876654 665543221100 022355666664211 223
Q ss_pred hccCCccCHHhHHHHHHHHHhhcCCC----CChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHH
Q 005274 425 AKGVRNISFGDLLGNLGATMYKFKFR----IPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKS 500 (704)
Q Consensus 425 ~~~~~~~s~~~i~~~L~~~~~~~~~~----iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~ 500 (704)
+...|.|++|.++.++.... .|+. .........+....-......+||....- .+.. .....++.+
T Consensus 856 ~~~sDv~S~Gvvl~el~tg~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~ 925 (968)
T PLN00113 856 TEKSDIYGFGLILIELLTGK--SPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD---VSVN-----QNEIVEVMN 925 (968)
T ss_pred CcccchhhHHHHHHHHHhCC--CCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC---CCcc-----HHHHHHHHH
Confidence 44567788888877776532 2221 11112222221110000111223322110 0000 011235677
Q ss_pred HHHHhhhccccCCCCHHHHH
Q 005274 501 SLVALLYKEGVFRIDRLESL 520 (704)
Q Consensus 501 lL~~lL~~d~~~R~~rle~L 520 (704)
++.+++..||..|.+.-|.+
T Consensus 926 l~~~Cl~~~P~~RPt~~evl 945 (968)
T PLN00113 926 LALHCTATDPTARPCANDVL 945 (968)
T ss_pred HHHhhCcCCchhCcCHHHHH
Confidence 88899999999999876644
No 408
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.40 E-value=2.6e-12 Score=124.07 Aligned_cols=129 Identities=22% Similarity=0.299 Sum_probs=93.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+|++.|..++||+++. .|..|++|+..++... ..++.+|
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~---------------------------------------~~~~~~E 42 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL---------------------------------------LINRENE 42 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCccc---------------------------------------ccCHHHH
Confidence 6899999999999997 5889999997654210 1123345
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-hhHHHHHHHHHHHHHHCCc-----cccCCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-YLIEVGVYCSFNQLLEKGF-----YHADPHP 348 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~l~e~~v~~~L~qLh~~G~-----~H~DphP 348 (704)
++....+.+. ..+|+++....+..+++|||++|..+.+.... ...-..+...+..||..++ +|+|+||
T Consensus 43 ~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~ 116 (170)
T cd05151 43 AENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLP 116 (170)
T ss_pred HHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCc
Confidence 5554444331 23688887766678999999999988753110 1122456677889998874 9999999
Q ss_pred CcEEEecCCcEEEEecCCccccC
Q 005274 349 GNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 349 gNILv~~dG~l~liDFGl~~~l~ 371 (704)
+||+++ +++++++|||.+..-+
T Consensus 117 ~Nil~~-~~~~~liDf~~a~~~~ 138 (170)
T cd05151 117 GNFLLD-DGRLWLIDWEYAGMND 138 (170)
T ss_pred CcEEEE-CCeEEEEecccccCCC
Confidence 999998 7889999999988543
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.40 E-value=9.5e-13 Score=131.02 Aligned_cols=137 Identities=24% Similarity=0.354 Sum_probs=98.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
++||+|++|+||+|++..+|+.||||+.+.+... +..+.+..|+..++.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------------------------------~~~~~~~~e~~~~~~ 53 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-------------------------------KQREEFLREIRILKK 53 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-------------------------------HHHHHHHHHHHHHHh
Confidence 5799999999999999878999999998754211 112233444444444
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh---h-------HHHHHHHHHHHHHHCCcccc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY---L-------IEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~---l-------~e~~v~~~L~qLh~~G~~H~ 344 (704)
.++ +++.....+.......+++|||++|++|.++.... + .-.++..++.++|..|++|+
T Consensus 54 ~~~-----------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 122 (225)
T smart00221 54 LKH-----------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHR 122 (225)
T ss_pred CCC-----------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 332 22222222333456788999999999988775321 1 11455667889999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
|++|.|++++.++.++++|||.+......
T Consensus 123 di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 123 DLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred CCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 99999999999999999999998876543
No 410
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.38 E-value=1e-12 Score=143.06 Aligned_cols=137 Identities=19% Similarity=0.246 Sum_probs=93.2
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-+|+|.||.||||.+ +++.||||+..+.-.++...+ +.++.+. ..+
T Consensus 216 eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~E-----------------------------k~Iy~lp--~m~ 262 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNE-----------------------------KNIYSLP--GMK 262 (534)
T ss_pred HHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhH-----------------------------HHHHhcc--Ccc
Confidence 4689999999999999 579999999764322221111 1222221 112
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhhh--------HHHHHHHHHHHHHH--------
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLYL--------IEVGVYCSFNQLLE-------- 338 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~l--------~e~~v~~~L~qLh~-------- 338 (704)
..| +.+++..... -.......+||+||-+.++|.++..... +...+..+|.+||+
T Consensus 263 h~n---Il~Fi~~ekr------~t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~ 333 (534)
T KOG3653|consen 263 HEN---ILQFIGAEKR------GTADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHH 333 (534)
T ss_pred chh---HHHhhchhcc------CCccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCC
Confidence 223 3333332221 1111236789999999999999865421 12345678999985
Q ss_pred -CCccccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 339 -KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 339 -~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
-+|.|||+|..|||+..|+..+|+|||++..+.+.
T Consensus 334 Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 334 KPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG 369 (534)
T ss_pred CCccccccccccceEEccCCcEEeeccceeEEecCC
Confidence 57999999999999999999999999999988743
No 411
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=8.9e-13 Score=141.85 Aligned_cols=260 Identities=18% Similarity=0.191 Sum_probs=149.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChH-HHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQ-AVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~-~ivde~~~~l~~Eld~l~ 273 (704)
.-+|.|+|+.||+|.+....+.||||+-.-+ .++. +--+.+.+...+|-++.+
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN--------------------------K~WrdEKKeNYhKHAcREyrIHK 522 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN--------------------------KNWRDEKKENYHKHACREYRIHK 522 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc--------------------------cchhhHhhhhHHHHHHHHHhhhh
Confidence 4589999999999999888899999986522 1111 112344566777888888
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeee-cccceeEEEEeccCCChhhHHhh--hhHH-------HHHHHHHHHHHH--CCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVE-QTTRKVLIMEWVEGQKLSEVKDL--YLIE-------VGVYCSFNQLLE--KGF 341 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e-~ss~~vLVmE~i~G~~L~d~~~~--~l~e-------~~v~~~L~qLh~--~G~ 341 (704)
|+.|. .|+--.-|.. .+...+-|.|||+|.+|+-+... .+.+ .++..+|.||-+ .-|
T Consensus 523 eLDHp-----------RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 523 ELDHP-----------RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred ccCcc-----------eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 77772 2222222322 24567899999999999877542 1222 456677888854 689
Q ss_pred cccCCCCCcEEEe---cCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHH
Q 005274 342 YHADPHPGNLFRS---YDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTG 418 (704)
Q Consensus 342 ~H~DphPgNILv~---~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~ 418 (704)
+|-|+||||||+- ..|.|+|.|||+++.++.+......++ .+ ...--.+..+++|+...-.-.
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGm--eL-------TSQgAGTYWYLPPEcFvVgke----- 657 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGM--EL-------TSQGAGTYWYLPPECFVVGKE----- 657 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccce--ee-------ecccCceeeecCcceeecCCC-----
Confidence 9999999999973 458899999999998765432111000 00 000011223455554321000
Q ss_pred HHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHH
Q 005274 419 VFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQL 498 (704)
Q Consensus 419 v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~l 498 (704)
-......++.|++|.|+.+.+-. +-||.-...-..|+.--.++... .-.|- .+| -.|+++
T Consensus 658 --PPKIsnKVDVWSvGVIFyQClYG--rKPFGhnqsQQdILqeNTIlkAt----EVqFP----~KP--------vVsseA 717 (775)
T KOG1151|consen 658 --PPKISNKVDVWSVGVIFYQCLYG--RKPFGHNQSQQDILQENTILKAT----EVQFP----PKP--------VVSSEA 717 (775)
T ss_pred --CCccccceeeEeeehhhhhhhcc--CCCCCCchhHHHHHhhhchhcce----eccCC----CCC--------ccCHHH
Confidence 01123457888888877543321 23343332222222111111110 00111 123 458899
Q ss_pred HHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 499 KSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
++.+++.|.+-..-|++-.+---++++
T Consensus 718 kaFIRRCLaYRKeDR~DV~qLA~dpyl 744 (775)
T KOG1151|consen 718 KAFIRRCLAYRKEDRIDVQQLACDPYL 744 (775)
T ss_pred HHHHHHHHHhhhhhhhhHHHHccCccc
Confidence 999999998877777765443334444
No 412
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.35 E-value=5.7e-12 Score=127.90 Aligned_cols=251 Identities=17% Similarity=0.163 Sum_probs=149.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-+|.|+|+-||.++...|++.+|+|.+.-.-. +-.+...+|+|+.+.
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~--------------------------------~~~e~~~rEid~~rk 74 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ--------------------------------EDIEEALREIDNHRK 74 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccch--------------------------------HHHHHHHHHHHHHHh
Confidence 469999999999999888999999997642111 112345566666655
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------hhHH-------HHHHHHHHHHHHCC-
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------YLIE-------VGVYCSFNQLLEKG- 340 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~l~e-------~~v~~~L~qLh~~G- 340 (704)
.+| +.+.+.+.+.- .-..+.+...+|+..|..-++|.+.... .+.| .++..+|++||+..
T Consensus 75 f~s-~~vl~l~dh~l-----~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~ 148 (302)
T KOG2345|consen 75 FNS-PNVLRLVDHQL-----REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP 148 (302)
T ss_pred hCC-cchHHHHHHHH-----HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 554 33322221100 0011235567899999888887776432 1222 57788999999999
Q ss_pred -ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHH
Q 005274 341 -FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGV 419 (704)
Q Consensus 341 -~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v 419 (704)
+.|+|+||+|||...+|..++.|||.++...-..+.. .++ ..- ..-+++--++-|-+||...-...
T Consensus 149 ~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~-~~a---~~l---Qe~a~e~Ct~pyRAPELf~vk~~------ 215 (302)
T KOG2345|consen 149 PYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGS-RQA---LRL---QEWAEERCTIPYRAPELFNVKSH------ 215 (302)
T ss_pred cccccCCCcceeEecCCCceEEEeccCccccceEeech-HHH---HHH---HHHHHHhCCCcccCchheecccC------
Confidence 9999999999999999999999999998754321100 000 000 11233334455555553221111
Q ss_pred HHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhh-cCCCCccccccchhHHhhhccCCChHH
Q 005274 420 FQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAIS-SNPNYKVLGSTYPYIARKVLTDSSPQL 498 (704)
Q Consensus 420 ~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~-ldP~~~i~~~a~P~i~r~ll~d~sp~l 498 (704)
...+...|.||+|+.+..++ |...|+= .+...- ..++.. .++.+++... ...|..+
T Consensus 216 --~ti~ertDIWSLGCtLYa~m-------f~~sPfe-~~~~~G---gSlaLAv~n~q~s~P~~----------~~yse~l 272 (302)
T KOG2345|consen 216 --CTITERTDIWSLGCTLYAMM-------FGESPFE-RIYQQG---GSLALAVQNAQISIPNS----------SRYSEAL 272 (302)
T ss_pred --cccccccchhhhhHHHHHHH-------HcCCcch-HHhhcC---CeEEEeeeccccccCCC----------CCccHHH
Confidence 12344568888888765543 2222221 111100 111221 2345554321 1257789
Q ss_pred HHHHHHhhhccccCCCCHHHH
Q 005274 499 KSSLVALLYKEGVFRIDRLES 519 (704)
Q Consensus 499 r~lL~~lL~~d~~~R~~rle~ 519 (704)
.++++.||+.||..|.+.-+-
T Consensus 273 ~~lik~mlqvdP~qRP~i~~l 293 (302)
T KOG2345|consen 273 HQLIKSMLQVDPNQRPTIPEL 293 (302)
T ss_pred HHHHHHHhcCCcccCCCHHHH
Confidence 999999999999999876553
No 413
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.34 E-value=6.1e-13 Score=149.67 Aligned_cols=166 Identities=21% Similarity=0.200 Sum_probs=114.7
Q ss_pred ccccccccceEEEEEEccC-C--cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQS-G--RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~t-G--~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
|-||+||||.|++|.++.. | -.||||+.+++....+ .+ ||
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~---------------------------md----------df 158 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI---------------------------MD----------DF 158 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh---------------------------HH----------HH
Confidence 4589999999999998643 3 3599999998754321 11 67
Q ss_pred HHHHhhHHHHHHHhcCCccee-eceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVL-IPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEK 339 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~-vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~ 339 (704)
++|+.++-++.+ +++. .--++ +.....||||.+++++|.+.... .....++..++.||-..
T Consensus 159 lrEas~M~~L~H-----~hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk 231 (1039)
T KOG0199|consen 159 LREASHMLKLQH-----PHLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK 231 (1039)
T ss_pred HHHHHHHHhccC-----cceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh
Confidence 888888755543 3322 22222 23567799999999999886532 12336777789999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhH-HHHHH--------HHHHHhhccChhHHHHHHHhcCCCC
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL-REGFI--------EACLHLVNRDFDALAKDFVTLGLLP 404 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~-r~~~~--------~~~~~l~~~d~~~la~d~~slG~l~ 404 (704)
+++|||+-..|+++.....+||+|||+|+.+.... ++.+. -...+-++..--.-+.|+|..|+.-
T Consensus 232 rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTi 305 (1039)
T KOG0199|consen 232 RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTI 305 (1039)
T ss_pred hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhH
Confidence 99999999999999888899999999999987543 22111 1122223333334577888888753
No 414
>PRK10345 hypothetical protein; Provisional
Probab=99.32 E-value=1.9e-11 Score=124.46 Aligned_cols=135 Identities=15% Similarity=0.131 Sum_probs=86.6
Q ss_pred CCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 193 SPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 193 ~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+.++||+|++|.||. ++.++.. +||+.+++-.. ..+.+.+|++++
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--------------------------------~~~~~~rEi~~l 50 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--------------------------------GDKEIRRELKYY 50 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--------------------------------hHHHHHHHHHHH
Confidence 347899999999995 6556666 69998753110 113456777776
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccc-----ee-EEEEe--ccCCChhhHHhh-hhH-----HHHHHHHH-HHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTR-----KV-LIMEW--VEGQKLSEVKDL-YLI-----EVGVYCSF-NQLL 337 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~-----~v-LVmE~--i~G~~L~d~~~~-~l~-----e~~v~~~L-~qLh 337 (704)
+...+ .-.++++ ++++|..+.+. .+ +|||| +.|++|.++... .+. -.++...+ ++||
T Consensus 51 ~~L~~------~~~~h~n--Ivr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh 122 (210)
T PRK10345 51 AHLSR------RLIDWSG--IPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLL 122 (210)
T ss_pred HHhhc------cCCCCcc--cceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHH
Confidence 66532 1122344 44444333332 22 78999 557899887542 111 12334344 8999
Q ss_pred HCCccccCCCCCcEEEecC----CcEEEEecCCcccc
Q 005274 338 EKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEF 370 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~d----G~l~liDFGl~~~l 370 (704)
++||+|||+||+||+++.. ++++++|||-...+
T Consensus 123 ~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 123 DNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 9999999999999999743 47999994444443
No 415
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.32 E-value=6e-12 Score=139.94 Aligned_cols=166 Identities=18% Similarity=0.225 Sum_probs=118.8
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
...+|-|-||.||.|.+++-.-.||||..+-+.-+ + ..+..|...++
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-----------------------------v----eEFLkEAAvMK 318 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----------------------------V----EEFLKEAAVMK 318 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh-----------------------------H----HHHHHHHHHHH
Confidence 45799999999999999988899999987633111 1 23445666777
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
|.+| .++.++++- +......|+++||+..+.|-++.+. -....+|.+++.||-..+|+
T Consensus 319 eikH-pNLVqLLGV----------CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFI 387 (1157)
T KOG4278|consen 319 EIKH-PNLVQLLGV----------CTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFI 387 (1157)
T ss_pred hhcC-ccHHHHhhh----------hccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 7776 445555442 1224467899999999999888642 12236888899999999999
Q ss_pred ccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHH-------HHHhhccChhHHHHHHHhcCCC
Q 005274 343 HADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEA-------CLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 343 H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~-------~~~l~~~d~~~la~d~~slG~l 403 (704)
|||+-..|+|+.++.-+|+.|||+++.+..++..+..++ .+.-+.-+.-....|+|..|++
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVL 455 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 455 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHH
Confidence 999999999999999999999999998877654433321 1111122223456788888775
No 416
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.31 E-value=5.9e-12 Score=145.60 Aligned_cols=170 Identities=15% Similarity=0.136 Sum_probs=118.3
Q ss_pred ccccccccceEEEEEEcc-----CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-----SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-----tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.+|.|.||.||+|+... +-..||||..+.....+ ....+.+|+
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~-------------------------------~~~dF~REa 540 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ-------------------------------ARQDFRREA 540 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH-------------------------------HHHHHHHHH
Confidence 469999999999999842 22469999877443222 233456677
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------------h-----------hHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------------Y-----------LIE 326 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------------~-----------l~e 326 (704)
+++.+.+| ++|+----........++|+||++-++|.++... . -+.
T Consensus 541 eLla~l~H-----------~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA 609 (774)
T KOG1026|consen 541 ELLAELQH-----------PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA 609 (774)
T ss_pred HHHHhccC-----------CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH
Confidence 77766666 4444333333345678999999999999998531 1 123
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHH--------HHHHhhccChhHHHHHHH
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE--------ACLHLVNRDFDALAKDFV 398 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~--------~~~~l~~~d~~~la~d~~ 398 (704)
.+|..+|.||-++.|+||||-.-|+||..+-.|||.||||++.+-..+.+...+ +.++-+..+-.....|+|
T Consensus 610 ~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVW 689 (774)
T KOG1026|consen 610 TQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVW 689 (774)
T ss_pred HHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhh
Confidence 688899999999999999999999999999999999999999765443322221 122222233334677888
Q ss_pred hcCCCCCc
Q 005274 399 TLGLLPPT 406 (704)
Q Consensus 399 slG~l~p~ 406 (704)
+.|++..|
T Consensus 690 s~GVvLWE 697 (774)
T KOG1026|consen 690 SFGVVLWE 697 (774)
T ss_pred hhhhhhhh
Confidence 88876444
No 417
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.31 E-value=1.4e-11 Score=123.18 Aligned_cols=170 Identities=25% Similarity=0.284 Sum_probs=91.4
Q ss_pred EEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 005274 205 VYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQL 284 (704)
Q Consensus 205 VyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~ 284 (704)
||.|... +|+.||||+-+.+... +. ...........+...-.. ............+|.+++.++.+
T Consensus 2 Vy~~~~~-~~~~~a~K~~r~~~~~-Fk-------~~~~y~~~~~r~~~~~~~----~~~~~~~~~~~~~E~~~L~~l~~- 67 (188)
T PF01163_consen 2 VYHAIDP-DGEEVAVKIYRTGRTS-FK-------RRKKYRDYDYRFKKYRHK----SSWRYLIREWAKKEFRNLKRLYE- 67 (188)
T ss_dssp EEEEEEC-TTEEEEEEEE-S---S-S--------HHHHHTTTSTTSTTC--G------CHHHHHHHHHHHHHHHHHCCC-
T ss_pred EEEEECC-CCCEEEEEEeccCceE-EE-------Eeeeeecccchhcccccc----cCHHHHHHHHHHHHHHHHHHHHH-
Confidence 8999985 8999999998865322 11 111111111111000000 00011112233445555433322
Q ss_pred hcCCcceeeceeeeecccceeEEEEecc--CCChhhHHhhh--------hHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 005274 285 YGGIQDVLIPEMYVEQTTRKVLIMEWVE--GQKLSEVKDLY--------LIEVGVYCSFNQLLEKGFYHADPHPGNLFRS 354 (704)
Q Consensus 285 ~~~~~~V~vP~v~~e~ss~~vLVmE~i~--G~~L~d~~~~~--------l~e~~v~~~L~qLh~~G~~H~DphPgNILv~ 354 (704)
.++.+|+++. .++.+||||||+ |..+..+.... +.+..+......+|..|++|+||++.||+++
T Consensus 68 ----~Gv~vP~p~~--~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 68 ----AGVPVPKPYD--YNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD 141 (188)
T ss_dssp ----TT-SS--EEE--EETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE
T ss_pred ----CCccCCcEEE--EeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee
Confidence 4578999884 468899999999 88777664432 2222222244556899999999999999998
Q ss_pred cCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC
Q 005274 355 YDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 355 ~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~ 402 (704)
++ ++.++|||.+.....+.- ..++.+|...+..-+-..|.
T Consensus 142 ~~-~~~iIDf~qav~~~~p~a-------~~~l~RDi~ni~~fF~~~~~ 181 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVDSSHPNA-------EELLRRDIENIIRFFKKKGV 181 (188)
T ss_dssp TT-CEEE--GTTEEETTSTTH-------HHHHHHHHHHHHHHHHCCC-
T ss_pred cc-eEEEEecCcceecCCccH-------HHHHHHHHHHHHHHHHHhCC
Confidence 76 999999999887764332 23456666666666655554
No 418
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.30 E-value=2.6e-11 Score=112.64 Aligned_cols=131 Identities=21% Similarity=0.282 Sum_probs=91.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+++|.|+++.||+++.. +..++||+.++... ...+..|...
T Consensus 4 ~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----------------------------------~~~~~~e~~~--- 44 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----------------------------------GADREREVAI--- 44 (155)
T ss_pred eecccccccceEEEEec--CCeEEEEecCCCCc----------------------------------hhHHHHHHHH---
Confidence 57999999999999984 57899999875421 1122333333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecc--cceeEEEEeccCCChhhH--HhhhhHHHHHHHHHHHHHH---CCccccCCC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQT--TRKVLIMEWVEGQKLSEV--KDLYLIEVGVYCSFNQLLE---KGFYHADPH 347 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~s--s~~vLVmE~i~G~~L~d~--~~~~l~e~~v~~~L~qLh~---~G~~H~Dph 347 (704)
...+.+. ...+|+++.... +..+++|||++|..+... .........+...+.++|. .|++|+|+|
T Consensus 45 ---~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~ 116 (155)
T cd05120 45 ---LQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLH 116 (155)
T ss_pred ---HHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 3333332 244566554333 468999999999888643 1111223456667888887 479999999
Q ss_pred CCcEEEecCCcEEEEecCCccccCh
Q 005274 348 PGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 348 PgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
|+|+++++++.++++|||.+...++
T Consensus 117 ~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 117 PGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred cceEEEECCcEEEEEecccccCCCh
Confidence 9999999999999999999886543
No 419
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.29 E-value=3.5e-11 Score=124.76 Aligned_cols=145 Identities=20% Similarity=0.255 Sum_probs=92.0
Q ss_pred Ccccc-ccccceEEEEEEccCCcEEEEEEec-CChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVA-AASLGQVYQARLRQSGRVVAVKVQR-PGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 194 ~~PIg-sGS~GQVyrA~lk~tG~~VAVKVqr-P~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
...|| .|+-|.||+... +|..++||..+ +++...+..+-+. ..........+|+..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~--------------------~~~~~~~r~~rE~~l 93 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYL--------------------FTGLERTRAFAEFRL 93 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhccc--------------------ccchhhhHHHHHHHH
Confidence 35687 899999999987 58899999764 3332211111000 000111234444444
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeee--c-c---cceeEEEEeccC-CChhhHHhh-hh---HHHHHHHHHHHHHHCC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVE--Q-T---TRKVLIMEWVEG-QKLSEVKDL-YL---IEVGVYCSFNQLLEKG 340 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e--~-s---s~~vLVmE~i~G-~~L~d~~~~-~l---~e~~v~~~L~qLh~~G 340 (704)
+. ++.+ .++.+|.++.. . . .+.+++|||++| .+|.++... .+ .-.++..++.++|+.|
T Consensus 94 l~------~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G 162 (239)
T PRK01723 94 LA------QLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAG 162 (239)
T ss_pred HH------HHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC
Confidence 43 3332 34445555321 1 1 123599999998 677765321 11 1135667899999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
++|+|+||+|||++++++++++|||.+..-.
T Consensus 163 I~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 163 VYHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred CCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 9999999999999999999999999988654
No 420
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.27 E-value=1e-11 Score=133.96 Aligned_cols=133 Identities=19% Similarity=0.311 Sum_probs=92.5
Q ss_pred CccccccccceEEEEEEccCC-cEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSG-RVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG-~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
...||+|+||+||.+....++ +.+|+|+........ ...+..|.+.+
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~--------------------------------~~~l~~E~~vl 70 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK--------------------------------PSVLKIEIQVL 70 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC--------------------------------CccchhHHHHH
Confidence 468999999999999987554 689999876421110 00233344444
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeec---ccceeEEEEeccCCChhhHHhh-----------hhHHHHHHHHHHHHHH
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQ---TTRKVLIMEWVEGQKLSEVKDL-----------YLIEVGVYCSFNQLLE 338 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~---ss~~vLVmE~i~G~~L~d~~~~-----------~l~e~~v~~~L~qLh~ 338 (704)
....+ ......+|.++... ....++||+.+ |.+|.++... -.+..++..+++++|+
T Consensus 71 ~~l~~---------~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~ 140 (322)
T KOG1164|consen 71 KKLEK---------KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS 140 (322)
T ss_pred HHHhh---------hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh
Confidence 44432 11123455555544 23468999998 9999987532 1233566778999999
Q ss_pred CCccccCCCCCcEEEecC-----CcEEEEecCCcc
Q 005274 339 KGFYHADPHPGNLFRSYD-----GKLAYIDFGMMG 368 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~d-----G~l~liDFGl~~ 368 (704)
.||+|||+||+|+++... ..+.++|||+++
T Consensus 141 ~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 141 KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred cCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 999999999999999765 359999999998
No 421
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=1e-11 Score=134.52 Aligned_cols=135 Identities=19% Similarity=0.268 Sum_probs=95.7
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-||+|-||.|++|+++ |+.||||+..---+ .+.++|.++-+-
T Consensus 217 e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE-----------------------------------~SWfrEtEIYqT 259 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE-----------------------------------RSWFRETEIYQT 259 (513)
T ss_pred EEecCccccceeecccc--CCceEEEEecccch-----------------------------------hhhhhHHHHHHH
Confidence 57999999999999996 99999999753221 233444433221
Q ss_pred --HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------hH--HHHHHHHHHHHHH------
Q 005274 275 --AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------LI--EVGVYCSFNQLLE------ 338 (704)
Q Consensus 275 --a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------l~--e~~v~~~L~qLh~------ 338 (704)
++| +++-.+++.... -....++.+||++|-+.++|.|+.... +. ...+.++|.+||-
T Consensus 260 vmLRH-ENILgFIaaD~~------~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTq 332 (513)
T KOG2052|consen 260 VMLRH-ENILGFIAADNK------DNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQ 332 (513)
T ss_pred HHhcc-chhhhhhhcccc------CCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCC
Confidence 233 344333332111 113457899999999999999986531 11 1456678999983
Q ss_pred --CCccccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 339 --KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 339 --~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
-+|.|||+|.-|||+..+|.++|.|+|++-..+..
T Consensus 333 gKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 333 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD 369 (513)
T ss_pred CCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence 57999999999999999999999999998765443
No 422
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.26 E-value=9.7e-11 Score=119.03 Aligned_cols=75 Identities=32% Similarity=0.526 Sum_probs=59.2
Q ss_pred eeeeecccceeEEEEeccCCChhhHHhhh-hHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCcccc
Q 005274 295 EMYVEQTTRKVLIMEWVEGQKLSEVKDLY-LIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEF 370 (704)
Q Consensus 295 ~v~~e~ss~~vLVmE~i~G~~L~d~~~~~-l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l 370 (704)
+-.+.+++..+|+||||+|..+.+..... -....+...++++|..|++|+||||||++++. +.++++||+..+..
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIRIIDTQGKRMS 184 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEEEEECcccccc
Confidence 44556788889999999999998865431 11134556789999999999999999999874 55999999988753
No 423
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.26 E-value=2.1e-11 Score=136.83 Aligned_cols=250 Identities=15% Similarity=0.149 Sum_probs=163.0
Q ss_pred CCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHH--H
Q 005274 182 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVV--D 259 (704)
Q Consensus 182 G~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~iv--d 259 (704)
+.++...|-.|++ .||+|+|-.||||-+..+|.+||=--.+ +..+. .
T Consensus 34 e~~p~gRy~k~~e-vLGrGafKtVYka~De~~giEVAWnqvk------------------------------~~d~~q~~ 82 (632)
T KOG0584|consen 34 EKDPTGRYLKFDE-VLGRGAFKTVYKAFDEEEGIEVAWNQVK------------------------------IRDVTQSP 82 (632)
T ss_pred ccCCCCceeehhh-hcccccceeeeeccccccchhhHHHHHh------------------------------HHHhhcCh
Confidence 4556667777765 6999999999999998888877621100 00010 1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccc--eeEEEEeccCCChhhHHhh------hhH---HHH
Q 005274 260 EWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTR--KVLIMEWVEGQKLSEVKDL------YLI---EVG 328 (704)
Q Consensus 260 e~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~--~vLVmE~i~G~~L~d~~~~------~l~---e~~ 328 (704)
+-..+++.|+.+++-++| ++|.--.-+|....+ .++|+|.+.+|+|..+... +.+ -.+
T Consensus 83 ~~leR~~~Ev~lLKsL~H-----------~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQ 151 (632)
T KOG0584|consen 83 EELERLYSEVHLLKSLKH-----------PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQ 151 (632)
T ss_pred HHHHHHHHHHHHHccCCC-----------CceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHH
Confidence 223677888888887776 444444445655555 6799999999999998653 122 267
Q ss_pred HHHHHHHHHHC--CccccCCCCCcEEEec-CCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCC
Q 005274 329 VYCSFNQLLEK--GFYHADPHPGNLFRSY-DGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPP 405 (704)
Q Consensus 329 v~~~L~qLh~~--G~~H~DphPgNILv~~-dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p 405 (704)
|..+|.|||++ -|+|||+|-.||+|+. -|.+||.|.|+++...... .+..+.+.-|++|
T Consensus 152 ILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~------------------aksvIGTPEFMAP 213 (632)
T KOG0584|consen 152 ILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH------------------AKSVIGTPEFMAP 213 (632)
T ss_pred HHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc------------------cceeccCccccCh
Confidence 88899999975 7999999999999974 5999999999987543321 1223445666666
Q ss_pred ccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchh
Q 005274 406 TAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPY 485 (704)
Q Consensus 406 ~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~ 485 (704)
+ ++...|+..+|..+||--+-++.. .+||..==..-+.|-|... .| .+|-
T Consensus 214 E------------mYEE~YnE~VDVYaFGMCmLEMvT--~eYPYsEC~n~AQIYKKV~--SG--------------iKP~ 263 (632)
T KOG0584|consen 214 E------------MYEENYNELVDVYAFGMCMLEMVT--SEYPYSECTNPAQIYKKVT--SG--------------IKPA 263 (632)
T ss_pred H------------HHhhhcchhhhhhhhhHHHHHHHh--ccCChhhhCCHHHHHHHHH--cC--------------CCHH
Confidence 5 334456667788888765555543 3344322122233333322 22 2232
Q ss_pred HHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 486 IARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 486 i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...+ -..|++++.+.+.|.- ..-|.++.|-|.|..|
T Consensus 264 sl~k---V~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff 299 (632)
T KOG0584|consen 264 ALSK---VKDPEVREFIEKCLAT-KSERLSAKELLKDPFF 299 (632)
T ss_pred Hhhc---cCCHHHHHHHHHHhcC-chhccCHHHHhhChhh
Confidence 2222 2378888888887776 6778888888888766
No 424
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=9e-11 Score=118.05 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=98.2
Q ss_pred cccccccceEEEEEEcc------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhh-----ccCChHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQ------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARK-----FNTDLQAVVDEWASS 264 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~-----~~~dl~~ivde~~~~ 264 (704)
+||.|-=+.||.|.... .+..||||+-+.+...- +....++..-.. ...+...++..|+
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~~~rf~~~~~k~~~~~~~~~wa-- 73 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKDDYRFKDRFSKLNPRKIIRMWA-- 73 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccCCcccccCcCCCCHHHHHHHHH--
Confidence 68999999999998642 25799999988543221 111111111001 1123333333333
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCC-----hhhHHh----hhhHHHHHHHHHHH
Q 005274 265 LFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQK-----LSEVKD----LYLIEVGVYCSFNQ 335 (704)
Q Consensus 265 l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~-----L~d~~~----~~l~e~~v~~~L~q 335 (704)
.+|.+++.++.+ ..+.+|+++. ..+.+|||||+.|.. |.+... ..-.-.++...+..
T Consensus 74 -------~kE~r~L~rl~~-----~Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~ 139 (197)
T cd05146 74 -------EKEMHNLKRMQK-----AGIPCPEVVV--LKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQ 139 (197)
T ss_pred -------HHHHHHHHHHHH-----cCCCCCeEEE--ecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHH
Confidence 356666666554 3588899885 478999999998742 222110 00111344455665
Q ss_pred H-HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhH
Q 005274 336 L-LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEEL 374 (704)
Q Consensus 336 L-h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~ 374 (704)
+ |..|++|+||+|.||++. +|++.++|||.+...+.+.
T Consensus 140 l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp~ 178 (197)
T cd05146 140 LYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHPH 178 (197)
T ss_pred HHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCCC
Confidence 5 899999999999999996 6889999999998876543
No 425
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=5.1e-10 Score=110.29 Aligned_cols=137 Identities=24% Similarity=0.299 Sum_probs=94.9
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.++++|.=+.+|.+... |.++++|..-|.--..=..| ..+.+| .-.+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD-----------------------------~klrr~-Rt~~E 49 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELD-----------------------------EKLRRE-RTRRE 49 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHH-----------------------------HHHHHH-HHHHH
Confidence 46788999999999763 66788887655322211122 222222 22455
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhhhH--HHHHHHHHHHHHHCCccccCCCCCcEE
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLYLI--EVGVYCSFNQLLEKGFYHADPHPGNLF 352 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~l~--e~~v~~~L~qLh~~G~~H~DphPgNIL 352 (704)
|+.+.+... -.|.+|.+|.-......+||||++|..+.+....... -..+-..+.-||..||+|+||-+.||+
T Consensus 50 aril~~a~~-----~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiI 124 (204)
T COG3642 50 ARILAKARE-----AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNII 124 (204)
T ss_pred HHHHHHHHH-----cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEE
Confidence 655544443 3688999999888889999999999999876543211 122333456799999999999999999
Q ss_pred EecCCcEEEEecCCccc
Q 005274 353 RSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 353 v~~dG~l~liDFGl~~~ 369 (704)
+..+ ++.++||||...
T Consensus 125 l~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 125 LSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCC-cEEEEECCcccc
Confidence 9654 499999999763
No 426
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.17 E-value=5.9e-11 Score=121.81 Aligned_cols=145 Identities=14% Similarity=0.210 Sum_probs=106.6
Q ss_pred ChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHH
Q 005274 184 PIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWAS 263 (704)
Q Consensus 184 ~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~ 263 (704)
.+++.|.-. +-+|.|.||.+-.|+++.+.+.+++|......- -.+
T Consensus 21 ~l~d~y~I~--k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---------------------------------t~~ 65 (378)
T KOG1345|consen 21 DLEDVYTIN--KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---------------------------------TQA 65 (378)
T ss_pred chhhhhhHH--HHhcccceeeEEeeeccCCceEEEeeccCcchh---------------------------------hHH
Confidence 345555433 579999999999999999999999997642110 013
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh--------hhhHHHHHHHHHHH
Q 005274 264 SLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD--------LYLIEVGVYCSFNQ 335 (704)
Q Consensus 264 ~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~--------~~l~e~~v~~~L~q 335 (704)
.+.+|..|--++.+..++..-|. +.++.++-.|.||||++-++|..-.. .+.+..++.+++.+
T Consensus 66 dF~rEfhY~~~Ls~H~hIi~tY~---------vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~f 136 (378)
T KOG1345|consen 66 DFVREFHYSFFLSPHQHIIDTYE---------VAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEF 136 (378)
T ss_pred HHHHHhccceeeccchhhhHHHH---------HHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHH
Confidence 35567777666666555554432 33455667789999999998876421 13455788899999
Q ss_pred HHHCCccccCCCCCcEEEe-c-CCcEEEEecCCccccCh
Q 005274 336 LLEKGFYHADPHPGNLFRS-Y-DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 336 Lh~~G~~H~DphPgNILv~-~-dG~l~liDFGl~~~l~~ 372 (704)
||+.+++|||+|.+||||- + .-++|+||||.....+.
T Consensus 137 MHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 137 MHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred hhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 9999999999999999983 3 35799999999887653
No 427
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=1.1e-10 Score=127.71 Aligned_cols=133 Identities=19% Similarity=0.234 Sum_probs=89.2
Q ss_pred hhhhhc---ccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHH
Q 005274 185 IDELFS---EISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEW 261 (704)
Q Consensus 185 ~~eiF~---~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~ 261 (704)
+.++|. +.-...+|-|-|+.||.|.+..+.+.||+||++- ...+
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---------------------------------AqhY 117 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---------------------------------AQHY 117 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---------------------------------hhHH
Confidence 345554 3334679999999999999998899999999973 1245
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeec----ccceeEEEEeccCCChhhHHhh-----------hhHH
Q 005274 262 ASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQ----TTRKVLIMEWVEGQKLSEVKDL-----------YLIE 326 (704)
Q Consensus 262 ~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~----ss~~vLVmE~i~G~~L~d~~~~-----------~l~e 326 (704)
.+....||.+++.++... .+-.+...|+-.--++.. ....++|+|++ |..|-.+... +-+-
T Consensus 118 tEaAlDEIklL~~v~~~D---p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~ 193 (590)
T KOG1290|consen 118 TEAALDEIKLLQQVREGD---PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEIC 193 (590)
T ss_pred HHHHHHHHHHHHHHHhcC---CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHH
Confidence 566677888888776532 000011111111111111 23467999999 7777666432 1233
Q ss_pred HHHHHHHHHHHH-CCccccCCCCCcEEEe
Q 005274 327 VGVYCSFNQLLE-KGFYHADPHPGNLFRS 354 (704)
Q Consensus 327 ~~v~~~L~qLh~-~G~~H~DphPgNILv~ 354 (704)
.++..+|.|||+ .||+|-|+||+|||+.
T Consensus 194 ~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 194 RQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 678889999995 7999999999999974
No 428
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.16 E-value=1.1e-10 Score=122.74 Aligned_cols=131 Identities=24% Similarity=0.461 Sum_probs=95.3
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||.||||..+.|+..-++++||||.-.- ..+...+-+|+
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--------------------------kS~APQLrdEY------------- 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--------------------------KSEAPQLRDEY------------- 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc--------------------------cCCcchHHHHH-------------
Confidence 579999999999999988999999997421 11122222222
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeec-c-cceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQ-T-TRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~-s-s~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G~~ 342 (704)
++-+.+.+.+. ||.+|.-. + -...||||.+ |.+|.|+.+. .++..++..-++++|++.++
T Consensus 75 -----r~YKlL~g~~G--IP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LI 146 (449)
T KOG1165|consen 75 -----RTYKLLGGTEG--IPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLI 146 (449)
T ss_pred -----HHHHHHcCCCC--CCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhccee
Confidence 23344554443 67776432 2 3457999999 9999987542 35567778889999999999
Q ss_pred ccCCCCCcEEEecCC-----cEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDG-----KLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG-----~l~liDFGl~~~l~~ 372 (704)
.||+||+|+||..-| .|.++||||+++.-+
T Consensus 147 YRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 147 YRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred ecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 999999999996433 488999999998643
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=1.7e-10 Score=137.82 Aligned_cols=131 Identities=21% Similarity=0.309 Sum_probs=91.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+-+|.|++|+||+|+.. +|+.||+|+++|-. ..|+||...+...+ . ...
T Consensus 704 ~e~G~g~y~~vy~a~~~-~~~~~alK~e~P~~----~WEfYI~~q~~~RL---------------------k-----~~~ 752 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHS-NGKLVALKVEKPPN----PWEFYICLQVMERL---------------------K-----PQM 752 (974)
T ss_pred eeeccccceEEEEeecC-CCcEEEEEeecCCC----ceeeeehHHHHHhh---------------------c-----hhh
Confidence 46999999999999997 59999999999853 34445443332211 1 111
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh------h---hHHHHHHHHHHHHHHCCccccC
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL------Y---LIEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~------~---l~e~~v~~~L~qLh~~G~~H~D 345 (704)
....-.|...+ -+.+..+||+||.+-|+|-++... . +...++...+.+||..||+|+|
T Consensus 753 ~~~~~~~~~a~-------------~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgD 819 (974)
T KOG1166|consen 753 LPSIMHISSAH-------------VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGD 819 (974)
T ss_pred hcchHHHHHHH-------------ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceeccc
Confidence 11111111111 135678999999999999988542 1 2336777789999999999999
Q ss_pred CCCCcEEEec-------CCcEEEEecCCccc
Q 005274 346 PHPGNLFRSY-------DGKLAYIDFGMMGE 369 (704)
Q Consensus 346 phPgNILv~~-------dG~l~liDFGl~~~ 369 (704)
|||.|+|+.. .--|+|||||.+-.
T Consensus 820 iKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 820 IKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred CCcceeEeecccCCCCcccceEEEeccccee
Confidence 9999999853 23499999998543
No 430
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.07 E-value=2.3e-10 Score=127.92 Aligned_cols=165 Identities=19% Similarity=0.184 Sum_probs=111.2
Q ss_pred ccccccccceEEEEEEcc--CCc--EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ--SGR--VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~--tG~--~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
+-||.|-||-||+|++.. .|+ .||||.-+.+... . -.+ .
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~--------------------------d-----~te------k 437 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP--------------------------D-----DTE------K 437 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCCh--------------------------h-----hHH------H
Confidence 579999999999999852 233 4899987754221 0 011 4
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh----------hhHHHHHHHHHHHHHHCC
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL----------YLIEVGVYCSFNQLLEKG 340 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~----------~l~e~~v~~~L~qLh~~G 340 (704)
|++|+.-+.+|. |..-|..-.+.. ....++|||.++-+.|..+... -+.-.++..+|.||++..
T Consensus 438 flqEa~iMrnfd----HphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr 511 (974)
T KOG4257|consen 438 FLQEASIMRNFD----HPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR 511 (974)
T ss_pred HHHHHHHHHhCC----Ccchhheeeeee--ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 667776554443 222222222221 3467899999999999887542 234478888999999999
Q ss_pred ccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHH-------HHHHhhccChhHHHHHHHhcCC
Q 005274 341 FYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIE-------ACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~-------~~~~l~~~d~~~la~d~~slG~ 402 (704)
|+|||+-..|||+...-.+|+.|||+++.++.+..+.-.. +.+.-+|-..-..+.|+|-.|+
T Consensus 512 fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgV 580 (974)
T KOG4257|consen 512 FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGV 580 (974)
T ss_pred hhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHH
Confidence 9999999999999999999999999999988764332111 2222333333446777777765
No 431
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.04 E-value=1.6e-09 Score=126.72 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=115.4
Q ss_pred cccccccceEEEEEEcc---C----CcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQ---S----GRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRE 268 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~---t----G~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~E 268 (704)
++|+|.||+|++|..+. . ...||||..+..... .-.+.+..|
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-------------------------------~~~~~~~~E 351 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-------------------------------SEKKDLMSE 351 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCc-------------------------------HHHHHHHHH
Confidence 89999999999998751 1 457999998765432 112456677
Q ss_pred HHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh-h-----------------h------
Q 005274 269 LDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL-Y-----------------L------ 324 (704)
Q Consensus 269 ld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~-~-----------------l------ 324 (704)
++.+....++.++..+.+... ..+..++|+||++.++|.++... + +
T Consensus 352 l~~m~~~g~H~niv~llG~~t----------~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLl 421 (609)
T KOG0200|consen 352 LNVLKELGKHPNIVNLLGACT----------QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLL 421 (609)
T ss_pred HHHHHHhcCCcchhhheeeec----------cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHH
Confidence 777777765555554443211 15678899999999999887532 1 1
Q ss_pred -HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH-------HH--HHHHHhhccChhHHH
Q 005274 325 -IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG-------FI--EACLHLVNRDFDALA 394 (704)
Q Consensus 325 -~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~-------~~--~~~~~l~~~d~~~la 394 (704)
...|+..++++|.+..++|||+-.-|||++.+..++++|||+++......-+. +- -+.+.-+....+...
T Consensus 422 sfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k 501 (609)
T KOG0200|consen 422 SFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK 501 (609)
T ss_pred HHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc
Confidence 23678889999999999999999999999999999999999998644321110 10 122223333444556
Q ss_pred HHHHhcCCC
Q 005274 395 KDFVTLGLL 403 (704)
Q Consensus 395 ~d~~slG~l 403 (704)
.|+|+.|++
T Consensus 502 SDVWSfGI~ 510 (609)
T KOG0200|consen 502 SDVWSFGIL 510 (609)
T ss_pred chhhHHHHH
Confidence 677877764
No 432
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.02 E-value=7.3e-09 Score=106.60 Aligned_cols=176 Identities=23% Similarity=0.314 Sum_probs=114.3
Q ss_pred cccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Q 005274 196 PVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIEA 275 (704)
Q Consensus 196 PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea 275 (704)
+|.+|--+.||+|... ++..||||+.+.....--..+-++.. =.++.....+...++..| -.+|-
T Consensus 55 ~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~g-----d~Rf~~~~~~rr~lv~~W---------~~kEf 119 (268)
T COG1718 55 CISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQG-----DPRFRNSRSNRRKLVFAW---------ARKEF 119 (268)
T ss_pred eecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhc-----ChhhhcCCCCHHHHHHHH---------HHHHH
Confidence 7888999999999875 79999999998654332111111110 011222223444444444 34677
Q ss_pred hhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCC-----ChhhHH-----hhhhHHHHHHHHHHHHHH-CCcccc
Q 005274 276 KNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQ-----KLSEVK-----DLYLIEVGVYCSFNQLLE-KGFYHA 344 (704)
Q Consensus 276 ~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~-----~L~d~~-----~~~l~e~~v~~~L~qLh~-~G~~H~ 344 (704)
+|+.+..+ ..|.+|+++. .-+.||+|||+... .|.|+. ...+. ..+..++.-|.. .|++|+
T Consensus 120 ~NL~R~~e-----AGVrvP~Pi~--~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~-~~~v~~~~~l~~~a~LVHg 191 (268)
T COG1718 120 RNLKRAYE-----AGVRVPEPIA--FRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLY-EDVVEYMRRLYKEAGLVHG 191 (268)
T ss_pred HHHHHHHH-----cCCCCCCcee--ecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHH-HHHHHHHHHHHHhcCcccc
Confidence 77766655 4588999885 56789999999543 233332 11111 233344444444 999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~ 402 (704)
|+..=|||+. +|.+.+||||.+.......- ..++.+|...+...|...|+
T Consensus 192 DLSEyNiL~~-~~~p~iID~~QaV~~~hp~a-------~e~L~RDv~Ni~~fF~r~gv 241 (268)
T COG1718 192 DLSEYNILVH-DGEPYIIDVSQAVTIDHPNA-------FEFLERDVRNIARFFRRKGV 241 (268)
T ss_pred cchhhheEEE-CCeEEEEECccccccCCCch-------HHHHHHHHHHHHHHHHHcCC
Confidence 9999999998 99999999999988765432 23456777777777766665
No 433
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.96 E-value=7.3e-10 Score=127.24 Aligned_cols=167 Identities=16% Similarity=0.135 Sum_probs=110.5
Q ss_pred CccccccccceEEEEEEccCCc----EEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGR----VVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~----~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
.+.||+|.||.||+|.+-..|+ +|||||....-... -...+.+|.
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~-------------------------------~s~e~LdeA 749 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK-------------------------------ASIELLDEA 749 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCch-------------------------------hhHHHHHHH
Confidence 3679999999999999976675 58999875321100 001122222
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhH--HHHHHHHHHHHHHC
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLI--EVGVYCSFNQLLEK 339 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~--e~~v~~~L~qLh~~ 339 (704)
-.+....| .++.++++ +. .++...||++|++++.|.|+.+. .+. -.+|..+|.||+++
T Consensus 750 l~masldH-pnl~RLLg----------vc-~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q 817 (1177)
T KOG1025|consen 750 LRMASLDH-PNLLRLLG----------VC-MLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ 817 (1177)
T ss_pred HHHhcCCC-chHHHHhh----------hc-ccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 22222223 22222322 11 13347799999999999998542 122 27888999999999
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHH--------HHHHHhhccChhHHHHHHHhcCCC
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFI--------EACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~--------~~~~~l~~~d~~~la~d~~slG~l 403 (704)
+++|||+-..|+|+..-..+++.|||+++-+.++..+..+ .+....+....+.-..|+|+.|+.
T Consensus 818 rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVt 889 (1177)
T KOG1025|consen 818 RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVT 889 (1177)
T ss_pred chhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhh
Confidence 9999999999999999999999999999987765433211 123333444555667888888864
No 434
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.93 E-value=8.6e-09 Score=107.12 Aligned_cols=160 Identities=20% Similarity=0.213 Sum_probs=106.0
Q ss_pred cccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHH
Q 005274 190 SEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFREL 269 (704)
Q Consensus 190 ~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~El 269 (704)
+.+. ++||-|-=+-||.|... .|.+||||.-|-|- .++.. .+.--..+. .....+ .+..-.....+|.
T Consensus 93 e~iG-~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~Gr-tsFrk----vk~~R~y~~--~~~h~s---Wl~~sRl~A~rEf 160 (304)
T COG0478 93 EAIG-TKIGVGKESDVYVAIDP-KGRKVAVKFHRLGR-TSFRK----VKRNRDYLA--DKEHGS---WLYVSRLAAEREF 160 (304)
T ss_pred Hhhc-cccccCccceEEEEECC-CCCEEEEEEeecCc-hhhhh----hcchhhhhc--cccCcc---hhhhHHHHHHHHH
Confidence 3454 68999999999999986 89999999988662 11111 000000000 000011 1122223344566
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH--hhhh--HHHHHHHHHHHHHHCCccccC
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK--DLYL--IEVGVYCSFNQLLEKGFYHAD 345 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~--~~~l--~e~~v~~~L~qLh~~G~~H~D 345 (704)
.+++.... ..+.||+++. -++.++||||++|..|.... .... +-..+.+.+.-+.+.|++|+|
T Consensus 161 ~~L~~L~~-----------~G~~VP~P~~--~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGD 227 (304)
T COG0478 161 EALQRLYP-----------EGVKVPKPIA--WNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGD 227 (304)
T ss_pred HHHHHhhh-----------cCCCCCCccc--cccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccC
Confidence 65555443 3478898874 57889999999999888765 1111 113445556666799999999
Q ss_pred CCCCcEEEecCCcEEEEecCCccccChhH
Q 005274 346 PHPGNLFRSYDGKLAYIDFGMMGEFKEEL 374 (704)
Q Consensus 346 phPgNILv~~dG~l~liDFGl~~~l~~~~ 374 (704)
+.+=||++++||.+.++||-.+...+.+.
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~~hp~ 256 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPISHPD 256 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccCCCCC
Confidence 99999999999999999999888776543
No 435
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.89 E-value=2.4e-09 Score=129.16 Aligned_cols=187 Identities=17% Similarity=0.083 Sum_probs=106.4
Q ss_pred cceeEEEEeccCCChhhHHhh---hh-------HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 302 TRKVLIMEWVEGQKLSEVKDL---YL-------IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 302 s~~vLVmE~i~G~~L~d~~~~---~l-------~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
...+++|||+ +++|.++... .+ +-.++..++.+||+.||+|||+||+|||++..|+++++|||++....
T Consensus 53 ~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 53 DSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred chhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 3567889988 5588777531 11 22578889999999999999999999999887888877777765432
Q ss_pred hhHHH--HHHHH--HHH---hhccChhHH------------HHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccC
Q 005274 372 EELRE--GFIEA--CLH---LVNRDFDAL------------AKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNIS 432 (704)
Q Consensus 372 ~~~r~--~~~~~--~~~---l~~~d~~~l------------a~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s 432 (704)
..... .+..+ ... .....+... ...+.+..|++||.- ....++...|.|+
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~-----------~~~~~~~~sDVwS 200 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED-----------NGSSSNCASDVYR 200 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh-----------ccCCCCchhhhhh
Confidence 21100 00000 000 000000000 000112235555532 1233566778999
Q ss_pred HHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccC
Q 005274 433 FGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVF 512 (704)
Q Consensus 433 ~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~ 512 (704)
+|+++.+|+. ..|+.-.. ...+..+. ...+.|. . ....++..+++..||..||..
T Consensus 201 lGviL~ELl~-------~~~~~~~~-~~~~~~~~--~~~~~~~----------~-----~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 201 LGVLLFELFC-------PVSSREEK-SRTMSSLR--HRVLPPQ----------I-----LLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred HHHHHHHHhh-------CCCchhhH-HHHHHHHH--HhhcChh----------h-----hhcCHHHHHHHHHhCCCChhh
Confidence 9999888764 22332111 11111110 0111111 0 112466778888999999999
Q ss_pred CCCHHHHHhhhhH
Q 005274 513 RIDRLESLLTESL 525 (704)
Q Consensus 513 R~~rle~Ll~~~~ 525 (704)
|++..|.|-|+.+
T Consensus 256 Rps~~eil~h~~~ 268 (793)
T PLN00181 256 RPSMSELLQSEFI 268 (793)
T ss_pred CcChHHHhhchhh
Confidence 9999999989876
No 436
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.88 E-value=6.6e-09 Score=104.22 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=29.6
Q ss_pred HCCccccCCCCCcEEEec--CCcEEEEecCCccccCh
Q 005274 338 EKGFYHADPHPGNLFRSY--DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~--dG~l~liDFGl~~~l~~ 372 (704)
..+++|+|+||+||++++ ++.+.++||+.++.-.+
T Consensus 173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred CcEEEECCCCcccEEEcCCCCcEEEEEeccccccCCh
Confidence 368899999999999998 66789999999885443
No 437
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.81 E-value=3.8e-08 Score=104.39 Aligned_cols=152 Identities=18% Similarity=0.192 Sum_probs=80.1
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.++||.|+++.||.+++..||+++|||+-.-.- +.-..++..++. ..+..-++..
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~------------------------e~l~~~~~~~ 71 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKE------------------------EQLAITLFPG 71 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHH------------------------HHHGGGGSTT
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHH------------------------HHHHhhhhcc
Confidence 468999999999999999999999999864221 222222222211 1111111100
Q ss_pred HHhhHHHHH---HHhcCCcceeece--eeeecc--------cceeEEEEeccCCChhhHHhh------------h----h
Q 005274 274 EAKNGLKFR---QLYGGIQDVLIPE--MYVEQT--------TRKVLIMEWVEGQKLSEVKDL------------Y----L 324 (704)
Q Consensus 274 Ea~n~~~f~---~~~~~~~~V~vP~--v~~e~s--------s~~vLVmE~i~G~~L~d~~~~------------~----l 324 (704)
.+|..... .++....-+.++. .+.+.. -..++.|.-.. ++|.++... . .
T Consensus 72 -~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~ 149 (288)
T PF14531_consen 72 -VKNPKEAYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLS 149 (288)
T ss_dssp ---SHHHHHHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred -CCCHHHHHHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHH
Confidence 11222211 1111112222221 011111 13456777664 356555321 0 1
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
...++......+|..|++|+|++|.|++++++|.+.+.||+.+.....
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc
Confidence 114445667789999999999999999999999999999998776554
No 438
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.74 E-value=8.4e-08 Score=97.82 Aligned_cols=136 Identities=24% Similarity=0.414 Sum_probs=91.4
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.+|.|+||+||++... ..+++|+..+...... .....+.+|...+..
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~-----------------------------~~~~~~~~e~~~~~~ 53 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS-----------------------------KEVERFLREIQILAS 53 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccch-----------------------------hHHHHHHHHHHHHHH
Confidence 46889999999999986 7899999876533211 122334444443333
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhhh------------hHHHHHHHHHHHHHHCCcc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDLY------------LIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~~------------l~e~~v~~~L~qLh~~G~~ 342 (704)
..+ .+.+.--.-........+++++|+.|..+.++.... ....++..++.++|+.|++
T Consensus 54 ~~~----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~ 123 (384)
T COG0515 54 LNH----------PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGII 123 (384)
T ss_pred ccC----------CcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 332 111111111112233368999999999998654321 1224566678899999999
Q ss_pred ccCCCCCcEEEecCC-cEEEEecCCccccCh
Q 005274 343 HADPHPGNLFRSYDG-KLAYIDFGMMGEFKE 372 (704)
Q Consensus 343 H~DphPgNILv~~dG-~l~liDFGl~~~l~~ 372 (704)
|||+||.||+++..+ .++++|||++..+..
T Consensus 124 hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 124 HRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 999999999999988 799999999885543
No 439
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.74 E-value=1.3e-07 Score=93.32 Aligned_cols=139 Identities=22% Similarity=0.242 Sum_probs=93.4
Q ss_pred CCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHH
Q 005274 193 SPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYK 272 (704)
Q Consensus 193 ~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l 272 (704)
+-+++-.|.=|.|+++.. .|+...||-.-|.--+.=..|.++. ..+. .
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLt------------------------r~Rt------~ 58 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLT------------------------RKRT------K 58 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHH------------------------HHHH------H
Confidence 346788899999999998 6999999975443222222222211 1233 3
Q ss_pred HHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCC-ChhhHHhh---------hhHH--HHHHHHHHHHHHCC
Q 005274 273 IEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQ-KLSEVKDL---------YLIE--VGVYCSFNQLLEKG 340 (704)
Q Consensus 273 ~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~-~L~d~~~~---------~l~e--~~v~~~L~qLh~~G 340 (704)
+|++-..++.. -.+.+|.+|.-......|.|||++|. ++.++... .+.+ ..+-..+.-||..+
T Consensus 59 ~Ear~l~k~~~-----~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd 133 (229)
T KOG3087|consen 59 QEARLLAKCRA-----LGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND 133 (229)
T ss_pred HHHHHHHHHHH-----hCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC
Confidence 45554444444 25889999988888889999999993 44444211 1111 23334566789999
Q ss_pred ccccCCCCCcEEEecCC-c--EEEEecCCcc
Q 005274 341 FYHADPHPGNLFRSYDG-K--LAYIDFGMMG 368 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG-~--l~liDFGl~~ 368 (704)
++|+|+-..||++.++| + +.++|||+..
T Consensus 134 iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 134 IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred eecccccccceEEecCCCcCceEEEeecchh
Confidence 99999999999987765 3 4899999865
No 440
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.72 E-value=1.1e-08 Score=120.93 Aligned_cols=150 Identities=20% Similarity=0.197 Sum_probs=95.3
Q ss_pred HHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC-CCCccc
Q 005274 330 YCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL-LPPTAE 408 (704)
Q Consensus 330 ~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~-l~p~~d 408 (704)
...++|+|..|++|||+||.|++|+.-|++|+.|||+++..-...-.+ +-.+..+..+..+..-++ -.|+
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn-------l~eg~I~k~t~Ef~dKqvcgTPe-- 223 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN-------LKEGHIEKDTHEFQDKQVCGTPE-- 223 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch-------hhhcchHHHHHHhhhccccCCcc--
Confidence 456899999999999999999999999999999999987532221111 111112222333333332 1111
Q ss_pred hHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHH-HHHHHHhhhhhhhhcCCCCccccccchhHH
Q 005274 409 KEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSL-VIRSLAVLEGIAISSNPNYKVLGSTYPYIA 487 (704)
Q Consensus 409 ~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~l-iiRsl~~lEGi~~~ldP~~~i~~~a~P~i~ 487 (704)
+.+-+-++..-|+++||+|.+|-|+.+++..++.+.-.-|.++.- ++.-.+ | .|+=
T Consensus 224 ----yiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i--~------wpE~----------- 280 (1205)
T KOG0606|consen 224 ----YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI--E------WPEE----------- 280 (1205)
T ss_pred ----ccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc--c------cccc-----------
Confidence 111112344568999999999999999888777776666666532 211111 0 1111
Q ss_pred hhhccCCChHHHHHHHHhhhccccCCC
Q 005274 488 RKVLTDSSPQLKSSLVALLYKEGVFRI 514 (704)
Q Consensus 488 r~ll~d~sp~lr~lL~~lL~~d~~~R~ 514 (704)
-....|++++++.+||..+|.-|.
T Consensus 281 ---dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 ---DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ---CcCCCHHHHHHHHHHHHhChHhhc
Confidence 013568999999999999987774
No 441
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.71 E-value=2.6e-07 Score=97.54 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=67.1
Q ss_pred HHHHHhhHHHHHHHhcCCcceeecee--eeec-----ccceeEEEEeccCC-ChhhHHhh----h----h---HHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEM--YVEQ-----TTRKVLIMEWVEGQ-KLSEVKDL----Y----L---IEVGVYC 331 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v--~~e~-----ss~~vLVmE~i~G~-~L~d~~~~----~----l---~e~~v~~ 331 (704)
..+|.+++.++.+ .+|.+|.+ |.+. ..+.+||||+++|. +|.++... . . +-..+..
T Consensus 75 a~rE~~~l~~L~~-----~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 75 ADREWRAIHRLHE-----VGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHH-----cCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 4566677666665 35666766 4332 23578999999986 77776421 0 1 1124556
Q ss_pred HHHHHHHCCccccCCCCCcEEEec-------CCcEEEEecCCccc
Q 005274 332 SFNQLLEKGFYHADPHPGNLFRSY-------DGKLAYIDFGMMGE 369 (704)
Q Consensus 332 ~L~qLh~~G~~H~DphPgNILv~~-------dG~l~liDFGl~~~ 369 (704)
.+.+||..|++|+|++|+|||++. ++++.+|||+.+..
T Consensus 150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 788999999999999999999975 46899999998853
No 442
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.60 E-value=5.5e-07 Score=92.74 Aligned_cols=32 Identities=34% Similarity=0.425 Sum_probs=27.9
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
..++|+|+|||||+++++| +.++||+.++.=+
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcCcCC
Confidence 4678999999999999888 9999999987543
No 443
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.57 E-value=9.3e-08 Score=113.43 Aligned_cols=250 Identities=17% Similarity=0.175 Sum_probs=129.3
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
.+-+|++-|=.|.||+++ .|. |+|||--.... ..+ ++.+.+++.++-..+.
T Consensus 28 ~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p-----------------------~~s----L~~~~qrL~~ik~~l~ 78 (1431)
T KOG1240|consen 28 VENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDP-----------------------TIS----LRPFKQRLEEIKFALM 78 (1431)
T ss_pred ecccCchhhhhhhhccCC-Cce-EEEEEEeccCC-----------------------CCC----chHHHHHHHHHHHHhh
Confidence 467999999999999997 677 99998521100 011 1233333332222233
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH---------hhhhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK---------DLYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~---------~~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
++-|+--|.+... .....|||=+|+.. .|.|.. ..+.+..++.+++.|+|..|++|+
T Consensus 79 ~~pn~lPfqk~~~-------------t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHG 144 (1431)
T KOG1240|consen 79 KAPNCLPFQKVLV-------------TDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHG 144 (1431)
T ss_pred cCCcccchHHHHH-------------hhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 3333322222111 01112344444422 333321 123455788999999999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccc--cChhHHHHHHHHHHHhhccChhHHHHHHHhcC-CCCCccchHHHHHHHHHHHH
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGE--FKEELREGFIEACLHLVNRDFDALAKDFVTLG-LLPPTAEKEAVTKALTGVFQ 421 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~--l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG-~l~p~~d~~~i~~~L~~v~~ 421 (704)
|+|.+|||++.=.-+.+.||..-+. ++++.-..|..++-.--.+-.|-..+-|.+.| ...-..+..
T Consensus 145 DIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~----------- 213 (1431)
T KOG1240|consen 145 DIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAP----------- 213 (1431)
T ss_pred ccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCccc-----------
Confidence 9999999999999999999987553 23222111111110001111121222222222 111111100
Q ss_pred HHhhccCCccCHHhHHHHHHHHHhhcCCCCCh-hHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccC-CChHHH
Q 005274 422 NAVAKGVRNISFGDLLGNLGATMYKFKFRIPS-YFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTD-SSPQLK 499 (704)
Q Consensus 422 ~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~-~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d-~sp~lr 499 (704)
.+....|.++.||++.+|+.- .-|+ .++.++.- =.| ...|| ..++.. .++.+|
T Consensus 214 -~L~paMDIFS~GCViaELf~E------g~PlF~LSQL~aY---r~~--~~~~~-------------e~~Le~Ied~~~R 268 (1431)
T KOG1240|consen 214 -LLTPAMDIFSAGCVIAELFLE------GRPLFTLSQLLAY---RSG--NADDP-------------EQLLEKIEDVSLR 268 (1431)
T ss_pred -ccChhhhhhhhhHHHHHHHhc------CCCcccHHHHHhH---hcc--CccCH-------------HHHHHhCcCccHH
Confidence 134445667778887777641 1221 22221100 000 01111 222222 356799
Q ss_pred HHHHHhhhccccCCCCHHHHHhhh
Q 005274 500 SSLVALLYKEGVFRIDRLESLLTE 523 (704)
Q Consensus 500 ~lL~~lL~~d~~~R~~rle~Ll~~ 523 (704)
.++..|+..||.+|+++-+ .|..
T Consensus 269 nlil~Mi~rdPs~RlSAed-yL~~ 291 (1431)
T KOG1240|consen 269 NLILSMIQRDPSKRLSAED-YLQK 291 (1431)
T ss_pred HHHHHHHccCchhccCHHH-HHHh
Confidence 9999999999999999754 4443
No 444
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.57 E-value=7.2e-07 Score=89.69 Aligned_cols=131 Identities=24% Similarity=0.352 Sum_probs=77.0
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+|++.|..++||+.+.. + ..+++|+-++. .....+..|..+++.
T Consensus 3 ~~l~~G~~n~~~~v~~~-~-~~~vlK~~~~~----------------------------------~~~~~~~~e~~~~~~ 46 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTD-D-GRYVLKFYRPP----------------------------------DAAERLRREAAVLRQ 46 (239)
T ss_dssp EEEEESSSSEEEEEEET-T-SEEEEEEESSH----------------------------------HHHHHHHHHHHHHHH
T ss_pred ccCCCCCeeeEEEEEEC-C-cEEEEEEeCCC----------------------------------CCHHHHHHHHHHHHH
Confidence 68999999999999985 3 59999997754 011223344444333
Q ss_pred HhhHHHHHHHhcCCcceeeceeee-----ecccceeEEEEeccCCChhh---H---Hh-----------h-h--------
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYV-----EQTTRKVLIMEWVEGQKLSE---V---KD-----------L-Y-------- 323 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~-----e~ss~~vLVmE~i~G~~L~d---~---~~-----------~-~-------- 323 (704)
++. ..+.+|+++. ......+++|+|++|..+.. . .. . .
T Consensus 47 l~~-----------~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~ 115 (239)
T PF01636_consen 47 LAE-----------HGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPF 115 (239)
T ss_dssp HHH-----------TTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCH
T ss_pred HHh-----------cCCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccccc
Confidence 322 1236777776 23334689999999998877 0 00 0 0
Q ss_pred -------------hHHH--------------HHHH-HHHHHH-------HCCccccCCCCCcEEEe-cCCcEEEEecCCc
Q 005274 324 -------------LIEV--------------GVYC-SFNQLL-------EKGFYHADPHPGNLFRS-YDGKLAYIDFGMM 367 (704)
Q Consensus 324 -------------l~e~--------------~v~~-~L~qLh-------~~G~~H~DphPgNILv~-~dG~l~liDFGl~ 367 (704)
.... .+.. .+..+. ..+++|+|+||+||+++ .+|++.++||+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a 195 (239)
T PF01636_consen 116 ADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA 195 (239)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred ccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccc
Confidence 0000 0001 122222 26799999999999999 6788899999998
Q ss_pred cccCh
Q 005274 368 GEFKE 372 (704)
Q Consensus 368 ~~l~~ 372 (704)
+.-++
T Consensus 196 ~~~~~ 200 (239)
T PF01636_consen 196 GWGDP 200 (239)
T ss_dssp EEEET
T ss_pred eECCH
Confidence 75443
No 445
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.54 E-value=1.6e-08 Score=114.47 Aligned_cols=165 Identities=18% Similarity=0.230 Sum_probs=113.6
Q ss_pred ccccccceEEEEEE---ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 197 VAAASLGQVYQARL---RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 197 IgsGS~GQVyrA~l---k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
+|.|++|.|...+- +..|.-+|.|++++.-... + + ......|.+++.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~----------------~------~--------~~~t~~er~il~ 51 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKV----------------R------D--------RTHTKQERIILA 51 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccc----------------c------c--------ccccccHHHHHh
Confidence 68899998875543 3356779999987431110 0 0 001222333333
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHh---------hhhHHHHHHHHHHHHHHCCcccc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKD---------LYLIEVGVYCSFNQLLEKGFYHA 344 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~---------~~l~e~~v~~~L~qLh~~G~~H~ 344 (704)
+.+ ..+.++-+....+..++.+++++|+.|+.+..-.. ...........+.++|..|++|+
T Consensus 52 ~~~----------~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyr 121 (612)
T KOG0603|consen 52 FVH----------NTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYR 121 (612)
T ss_pred hcc----------CCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHh
Confidence 333 24666777777888899999999999987754321 12333445567889999999999
Q ss_pred CCCCCcEEEecCCcEEEEecCCccccChhHHH--HHHHHHHHhhccChhHHHHHHHhcCCC
Q 005274 345 DPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE--GFIEACLHLVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 345 DphPgNILv~~dG~l~liDFGl~~~l~~~~r~--~~~~~~~~l~~~d~~~la~d~~slG~l 403 (704)
|+|+.||+++.+|++++.|||+.++.-+.... ++......+++ ....+.|+|++|.+
T Consensus 122 d~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl 180 (612)
T KOG0603|consen 122 DYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSFGVL 180 (612)
T ss_pred cccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhhhhh
Confidence 99999999999999999999999987766555 45455555666 34457788888876
No 446
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.50 E-value=1.6e-06 Score=87.85 Aligned_cols=97 Identities=24% Similarity=0.284 Sum_probs=69.9
Q ss_pred HHHHHHhhHHHHHHHhcCCcceeeceeeeecc------cceeEEEEeccCC-ChhhHHhh------h---hHHHHHHHHH
Q 005274 270 DYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQT------TRKVLIMEWVEGQ-KLSEVKDL------Y---LIEVGVYCSF 333 (704)
Q Consensus 270 d~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~s------s~~vLVmE~i~G~-~L~d~~~~------~---l~e~~v~~~L 333 (704)
...+|.+++.++.+ ..|.+|+++.-.. .+.+|+||+++|. +|.++... . -.-..+...+
T Consensus 57 ra~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 57 RAKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLI 131 (206)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHH
Confidence 34556666666665 3566777653222 2358999999995 67776432 1 1113455678
Q ss_pred HHHHHCCccccCCCCCcEEEecCC---cEEEEecCCccccC
Q 005274 334 NQLLEKGFYHADPHPGNLFRSYDG---KLAYIDFGMMGEFK 371 (704)
Q Consensus 334 ~qLh~~G~~H~DphPgNILv~~dG---~l~liDFGl~~~l~ 371 (704)
..||+.|++|+|++|+|||+..++ ++.++||+-+..-.
T Consensus 132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 899999999999999999999887 89999999887644
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.48 E-value=1.7e-07 Score=109.37 Aligned_cols=169 Identities=18% Similarity=0.219 Sum_probs=100.7
Q ss_pred EEeccCCChhhHHhh--hh-------HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHH--
Q 005274 308 MEWVEGQKLSEVKDL--YL-------IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRE-- 376 (704)
Q Consensus 308 mE~i~G~~L~d~~~~--~l-------~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~-- 376 (704)
||||++ +|..+... .+ .-.++..+++++|+.|+-|||+||.|++++.+|.++++|||.+....-....
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999999 77766432 12 2256666778889999999999999999999999999999998754332221
Q ss_pred ----HHHH----HHHH-hhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhc
Q 005274 377 ----GFIE----ACLH-LVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKF 447 (704)
Q Consensus 377 ----~~~~----~~~~-l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~ 447 (704)
++++ ++.+ +....|+..+.|+|+.|.+.-.+- +.++
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~-----------------------------------~~~~ 523 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMI-----------------------------------LGRF 523 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEe-----------------------------------cCCC
Confidence 1111 1111 233455566666777665421110 0112
Q ss_pred CCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 448 KFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 448 ~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
+.+.|.....-.... .. .-.+++... .++++.+..-+.+.+|.+||..||..|++.-+.|-.+-+
T Consensus 524 ~Wk~a~~~~~~~~~~-------~~-~~~~~~~~~-----~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 524 PWKVAKKSDNSFKTN-------NY-SDQRNIFEG-----PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred ccccccccccchhhh-------cc-ccccccccC-----hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 222221100000000 00 011222211 234555667788999999999999999998777776655
No 448
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.34 E-value=1.9e-05 Score=81.45 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=28.8
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
..++|+|+||+|+++++++...++||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccccccH
Confidence 4589999999999999877788999998875443
No 449
>PRK05231 homoserine kinase; Provisional
Probab=98.29 E-value=1.1e-05 Score=86.67 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=26.8
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.|++|+|+||+||+++.+....++||+.++.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 5999999999999998655458999999874
No 450
>PRK10593 hypothetical protein; Provisional
Probab=98.23 E-value=1.3e-05 Score=85.92 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=61.6
Q ss_pred HHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhcc
Q 005274 172 VAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFN 251 (704)
Q Consensus 172 ~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~ 251 (704)
.+.+.+.+.+|..+.+ .++||.|.+++||+.... +| .+.||+.+.....
T Consensus 3 ~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~~~----------------------- 51 (297)
T PRK10593 3 QLRAELSHLLGEKLSR------VECISEQPYAALWALYDS-QG-NPMPLMARSFSTP----------------------- 51 (297)
T ss_pred HHHHHHHHHhchhhhe------eeecCCccceeEEEEEcC-CC-CEEEEEecccccc-----------------------
Confidence 4556677777764433 379999999999998763 34 5788886531110
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeec-----ccceeEEEEeccCCCh
Q 005274 252 TDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQ-----TTRKVLIMEWVEGQKL 316 (704)
Q Consensus 252 ~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~-----ss~~vLVmE~i~G~~L 316 (704)
. .+..|+.++..+.+ ...|.||+++... .+..+|||||++|..+
T Consensus 52 -----------~------~~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 -----------G------VAQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred -----------h------HHHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 0 24456666544433 2358899998522 3568999999999765
No 451
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.16 E-value=2.1e-05 Score=83.45 Aligned_cols=31 Identities=29% Similarity=0.314 Sum_probs=28.1
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.+++|+|+||+|++++.++.+.++||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 5899999999999999887789999998875
No 452
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.07 E-value=2.8e-05 Score=80.09 Aligned_cols=33 Identities=36% Similarity=0.533 Sum_probs=26.9
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
.+++|+|+||+|++++.++-..++|||.+..-+
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gD 196 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGD 196 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCC
Confidence 468999999999999765545799999877543
No 453
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.07 E-value=8.6e-05 Score=80.52 Aligned_cols=184 Identities=23% Similarity=0.286 Sum_probs=112.9
Q ss_pred hhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHh-hhhccCChHHHHHHHHHHHH
Q 005274 188 LFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRK-ARKFNTDLQAVVDEWASSLF 266 (704)
Q Consensus 188 iF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~-~~~~~~dl~~ivde~~~~l~ 266 (704)
++.+++. .|..|--+-||.|+-. +|..+|||+-+-.+.---.+|-++-..+ +. .+.-..+...++.-|++
T Consensus 144 ~i~~inG-CiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEf----RFRhgyck~NPRKMVk~WAE--- 214 (520)
T KOG2270|consen 144 VIVEING-CISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEF----RFRHGYCKHNPRKMVKTWAE--- 214 (520)
T ss_pred eeeeccc-ccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhcccee----eeecccccCCcHHHHHHHHH---
Confidence 3445543 6778888999999885 8999999998765543333332221100 00 00112466677777764
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCC-----ChhhHH----h-hhhHHHHHHHHHHHH
Q 005274 267 RELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQ-----KLSEVK----D-LYLIEVGVYCSFNQL 336 (704)
Q Consensus 267 ~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~-----~L~d~~----~-~~l~e~~v~~~L~qL 336 (704)
+|.+|+.++.. ..|.+|++. +-...||||+||.+. +|.+.. . ..+. .++...++-|
T Consensus 215 ------KE~RNLkRl~~-----aGIP~PePI--lLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y-~~~v~~MR~l 280 (520)
T KOG2270|consen 215 ------KEMRNLKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELY-QQCVRIMRRL 280 (520)
T ss_pred ------HHHHHHHHHHh-----cCCCCCCce--eeecceEeeeeccCCCCcCcccccccCChHHHHHHH-HHHHHHHHHH
Confidence 56777776654 345566655 456789999999432 222221 0 1111 2333444444
Q ss_pred -HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC
Q 005274 337 -LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 337 -h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~ 402 (704)
+.++++|+||.-=|+|+ .+|++.+||-+.+.+.+.+.-..| +..|...+..-|-.+|+
T Consensus 281 Y~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE~DHP~aldF-------LRmDc~NVn~FF~r~gv 339 (520)
T KOG2270|consen 281 YQKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVEHDHPHALDF-------LRMDCNNVNDFFRRLGV 339 (520)
T ss_pred HHHhceeccchhhhhheE-ECCEEEEEEccccccCCChhHHHH-------HHHHHHHHHHHHHHcCC
Confidence 56899999999999998 789999999999888776543333 23344444444445554
No 454
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.01 E-value=0.00029 Score=78.59 Aligned_cols=111 Identities=22% Similarity=0.211 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCC-cEEEEEEecCChhhhHHHHHHHHHHHHHHHH
Q 005274 167 PFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSG-RVVAVKVQRPGVQAAISLDIFILHFIAGLIR 245 (704)
Q Consensus 167 p~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG-~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~ 245 (704)
++..+.+...+.+..|.-- --+..+-++||.|.+..||+.++. +| +.|+||...|-++..-.
T Consensus 6 ~l~~~~v~~yl~~~~~~~~--~~~~~~~~elggGn~N~VyrV~~~-~g~~svIVKqa~p~~r~~g~-------------- 68 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLFD--PKALLTAREIGDGNLNLVFRVSDT-EGGKSVIVKQALPYVRVVGE-------------- 68 (401)
T ss_pred eCCHhHHHHHHHHhcCCCC--CcccceeeEcCCCceEEEEEEEeC-CCCeEEEEEecCcccccccc--------------
Confidence 4455556666644433210 012344578999999999999996 55 68999987654321000
Q ss_pred hhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCC
Q 005274 246 KARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQK 315 (704)
Q Consensus 246 ~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~ 315 (704)
.+..++ .+.. .|++.+..+.+ .....+|++|.......++||||+++..
T Consensus 69 ---~wpl~~--------eR~~------~Eae~L~~l~~----~~p~~VPkV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 69 ---SWPLTL--------DRAR------IEAEALKIQAK----YVPDLVPKVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred ---cccccH--------HHHH------HHHHHHHHHHh----hCCCCCCeEEEECCCCCEEEEecCCCcc
Confidence 000000 1122 23333333222 1335799999887778899999998754
No 455
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.00 E-value=3.2e-05 Score=80.63 Aligned_cols=32 Identities=28% Similarity=0.303 Sum_probs=27.9
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
.++|+|+||+||+++++| +.++||..++.-++
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI 178 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence 689999999999999877 89999999875443
No 456
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.98 E-value=7.7e-05 Score=76.35 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=28.5
Q ss_pred CCccccCCCCCcEEEec-CCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSY-DGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~-dG~l~liDFGl~~~l~ 371 (704)
.+++|+|+||+||++++ ++.+.++||-.++.-.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~ 203 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNY 203 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCc
Confidence 47999999999999998 6889999999887533
No 457
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.96 E-value=8.5e-05 Score=73.39 Aligned_cols=123 Identities=21% Similarity=0.232 Sum_probs=79.6
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
.-+|.|..|.||.|.. .|.+||+|+++++-.. .++..|..++.-
T Consensus 28 ~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r----------------------------------~~l~kEakiLei 71 (201)
T COG2112 28 KELAKGTTSVVYLGEW--RGGEVALKVRRRDSPR----------------------------------RNLEKEAKILEI 71 (201)
T ss_pred hhhhcccccEEEEeec--cCceEEEEEecCCcch----------------------------------hhHHHHHHHHHH
Confidence 5699999999999998 5789999999976322 233334333322
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---hhHHHHHHHHHHHHHHCCccccCCC-CCc
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---YLIEVGVYCSFNQLLEKGFYHADPH-PGN 350 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~l~e~~v~~~L~qLh~~G~~H~Dph-PgN 350 (704)
++- .-..|++|. -++.++.|||++|.+|.+.... +....-+.. -.-|=..||-|..++ |-.
T Consensus 72 l~g------------~~~~p~vy~--yg~~~i~me~i~G~~L~~~~~~~~rk~l~~vlE~-a~~LD~~GI~H~El~~~~k 136 (201)
T COG2112 72 LAG------------EGVTPEVYF--YGEDFIRMEYIDGRPLGKLEIGGDRKHLLRVLEK-AYKLDRLGIEHGELSRPWK 136 (201)
T ss_pred hhh------------cCCCceEEE--echhhhhhhhhcCcchhhhhhcccHHHHHHHHHH-HHHHHHhccchhhhcCCce
Confidence 221 234566764 3456677999999999887542 111111111 112345799999988 444
Q ss_pred EEEecCCcEEEEecCCcc
Q 005274 351 LFRSYDGKLAYIDFGMMG 368 (704)
Q Consensus 351 ILv~~dG~l~liDFGl~~ 368 (704)
.++..++++.++||--++
T Consensus 137 ~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 137 NVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred eEEecCCcEEEEEccchh
Confidence 445566799999998877
No 458
>PRK09902 hypothetical protein; Provisional
Probab=97.93 E-value=0.00015 Score=73.98 Aligned_cols=140 Identities=13% Similarity=0.149 Sum_probs=92.0
Q ss_pred ccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 191 EISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 191 ~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
.+|+---|.|+.+.|++-.+ .|..+-||.|...+...... ++ .+-.
T Consensus 20 wve~pN~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~----------------P~----------------g~pt 65 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRY----------------PF----------------GRPT 65 (216)
T ss_pred eecCCCcCCCCcceEEEEEe--CCcEEEEEeccCcccccccC----------------CC----------------CchH
Confidence 45554567899999999877 57789999987443321100 00 1223
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeec------ccceeEEEEeccC-CChhhHHhh-----------hhHHHHHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQ------TTRKVLIMEWVEG-QKLSEVKDL-----------YLIEVGVYCS 332 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~------ss~~vLVmE~i~G-~~L~d~~~~-----------~l~e~~v~~~ 332 (704)
|.+|..++.++.+ .++.||++.... .-+.+||+|-++| .+|.++... .-.-..+...
T Consensus 66 f~rE~~~L~~L~~-----~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ 140 (216)
T PRK09902 66 IVREVAVIKELER-----AGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALA 140 (216)
T ss_pred HHHHHHHHHHHHH-----cCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHH
Confidence 4455555555554 345577765321 2236899998876 456665321 0111345567
Q ss_pred HHHHHHCCccccCCCCCcEEEecCCc--EEEEecCCccc
Q 005274 333 FNQLLEKGFYHADPHPGNLFRSYDGK--LAYIDFGMMGE 369 (704)
Q Consensus 333 L~qLh~~G~~H~DphPgNILv~~dG~--l~liDFGl~~~ 369 (704)
+.+||..|+.|+||-+-||+++.+|+ +++|||--++.
T Consensus 141 ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 141 FKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred HHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 89999999999999999999987777 99999977664
No 459
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.90 E-value=0.00011 Score=78.77 Aligned_cols=31 Identities=32% Similarity=0.423 Sum_probs=28.4
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.|++|+|+|++|+++++++...++||+.+..
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 7899999999999999988779999999874
No 460
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=97.89 E-value=2.8e-05 Score=75.33 Aligned_cols=143 Identities=14% Similarity=0.119 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCc
Q 005274 327 VGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGLLPPT 406 (704)
Q Consensus 327 ~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~ 406 (704)
.++..++.++|+.| ||+||+++.+|.+++ ||++........ ..+.+|++||
T Consensus 24 ~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~---------------------~g~~~y~aPE 74 (176)
T smart00750 24 LQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS---------------------RVDPYFMAPE 74 (176)
T ss_pred HHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC---------------------CCcccccChH
Confidence 57778899999988 999999999999998 999876543211 1223444444
Q ss_pred cchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCChhHHHHHHHHHhhhhhhhhcCCCCccccccchhH
Q 005274 407 AEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIPSYFSLVIRSLAVLEGIAISSNPNYKVLGSTYPYI 486 (704)
Q Consensus 407 ~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP~~~~liiRsl~~lEGi~~~ldP~~~i~~~a~P~i 486 (704)
.-.. ..++...|.|++|.++.++... +.++..+......++.+. .++ ...+|.-.. .+
T Consensus 75 ~~~~-----------~~~~~~~DiwSlG~il~elltg--~~p~~~~~~~~~~~~~~~--~~~-~~~~~~~~~----~~-- 132 (176)
T smart00750 75 VIQG-----------QSYTEKADIYSLGITLYEALDY--ELPYNEERELSAILEILL--NGM-PADDPRDRS----NL-- 132 (176)
T ss_pred HhcC-----------CCCcchhhHHHHHHHHHHHHhC--CCCccccchhcHHHHHHH--HHh-ccCCccccc----cH--
Confidence 2211 1223345666666666665432 222222222222222211 111 111111110 01
Q ss_pred HhhhccCCC--hHHHHHHHHhhhccccCCCCHHHHHhhhhH
Q 005274 487 ARKVLTDSS--PQLKSSLVALLYKEGVFRIDRLESLLTESL 525 (704)
Q Consensus 487 ~r~ll~d~s--p~lr~lL~~lL~~d~~~R~~rle~Ll~~~~ 525 (704)
...+ ++++++++.+|..||..|.+..+-+.|...
T Consensus 133 -----~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 133 -----ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred -----HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 0111 479999999999999999999887777643
No 461
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=97.81 E-value=2.3e-05 Score=84.74 Aligned_cols=79 Identities=14% Similarity=0.121 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHH--------HHHHHHHhhccChhHHHHH
Q 005274 325 IEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREG--------FIEACLHLVNRDFDALAKD 396 (704)
Q Consensus 325 ~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~--------~~~~~~~l~~~d~~~la~d 396 (704)
...++.+++.+||.+|++|.|+-..|++|++.-+++++|=.+++.+=+.+..- ..-+..+.+....+.-+.|
T Consensus 401 masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasD 480 (563)
T KOG1024|consen 401 MASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASD 480 (563)
T ss_pred HHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhh
Confidence 34788899999999999999999999999999999999999888754332111 1112223233344456788
Q ss_pred HHhcCCC
Q 005274 397 FVTLGLL 403 (704)
Q Consensus 397 ~~slG~l 403 (704)
.|++|++
T Consensus 481 vWsfGVl 487 (563)
T KOG1024|consen 481 VWSFGVL 487 (563)
T ss_pred hHHHHHH
Confidence 9988875
No 462
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.76 E-value=3.3e-05 Score=82.53 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=98.5
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKIE 274 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~E 274 (704)
+.||-|--+-||.+-.. .|.+.++|+-|-|-. -++.++.--..... +..-.++ .--.-...+|..|+.-
T Consensus 98 nqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRt-----SFR~Vk~kRDY~r~----r~~~sWl-yLSRlaa~kEfafmka 166 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADE-EGNPLILKLHRLGRT-----SFRNVKNKRDYLRK----RKSGSWL-YLSRLAATKEFAFMKA 166 (465)
T ss_pred cccccccccceEEEecC-CCCchhHHHHhhhhh-----hHHHhhhhhhhHhc----CCccchh-hhHHHHHHHHHHHHHH
Confidence 46888989999999986 899999998764310 11111110000000 0000110 0001122344444433
Q ss_pred HhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh---hhHHHHHHHHHHHHHHCCccccCCCCCcE
Q 005274 275 AKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL---YLIEVGVYCSFNQLLEKGFYHADPHPGNL 351 (704)
Q Consensus 275 a~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~---~l~e~~v~~~L~qLh~~G~~H~DphPgNI 351 (704)
... ..+.||+++. .++.+.|||+++|.+|.++... .-+-..+.+.+.-|-.+|++|+|-.-=||
T Consensus 167 L~e-----------~gfpVPkpiD--~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNi 233 (465)
T KOG2268|consen 167 LYE-----------RGFPVPKPID--HNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNI 233 (465)
T ss_pred HHH-----------cCCCCCCccc--ccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcCceecccchhee
Confidence 222 4567888774 7889999999999999877532 11223445566678899999999999999
Q ss_pred EEecCCcEEEEecCCccccChh
Q 005274 352 FRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 352 Lv~~dG~l~liDFGl~~~l~~~ 373 (704)
++..++++++|||-.|-..+.+
T Consensus 234 mv~dd~~i~vIDFPQmvS~sh~ 255 (465)
T KOG2268|consen 234 MVKDDDKIVVIDFPQMVSTSHP 255 (465)
T ss_pred EEecCCCEEEeechHhhccCCC
Confidence 9999999999999887766544
No 463
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=97.60 E-value=4e-05 Score=85.83 Aligned_cols=174 Identities=22% Similarity=0.249 Sum_probs=104.5
Q ss_pred cceeEEEEeccCCChhhHHhh-hhHH----HHHHHHHHHHHH----CCccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 302 TRKVLIMEWVEGQKLSEVKDL-YLIE----VGVYCSFNQLLE----KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 302 s~~vLVmE~i~G~~L~d~~~~-~l~e----~~v~~~L~qLh~----~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
...++.|+||+-..|.++... +..+ ..+...+.|+-. .|.+|+|+||.||+...++++++.|||++.....
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~ 408 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDK 408 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccchhhhhhhhhheeeccc
Confidence 346799999999999998752 1111 222223334322 8999999999999999999999999999987654
Q ss_pred hHHHHHHHHHHHhhccChhHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHhhccCCccCHHhHHHHHHHHHhhcCCCCC
Q 005274 373 ELREGFIEACLHLVNRDFDALAKDFVTLGLLPPTAEKEAVTKALTGVFQNAVAKGVRNISFGDLLGNLGATMYKFKFRIP 452 (704)
Q Consensus 373 ~~r~~~~~~~~~l~~~d~~~la~d~~slG~l~p~~d~~~i~~~L~~v~~~~~~~~~~~~s~~~i~~~L~~~~~~~~~~iP 452 (704)
... ....+........+.-|+.|+ .+.++.|+..++.+++|-|+.++...+ .
T Consensus 409 ~~~----------~~~~~a~~t~~~gt~~YmsPE-----------Qi~g~~y~~kvdIyaLGlil~EL~~~f-------~ 460 (516)
T KOG1033|consen 409 DET----------VAPAAASHTQQVGTLLYMSPE-----------QIRGQQYSEKVDIYALGLILAELLIQF-------S 460 (516)
T ss_pred CCc----------ccchhhhhhhcccccccCCHH-----------HHhhhhhhhhcchhhHHHHHHHHHHHh-------c
Confidence 320 000111223333444454443 334455677778888888877776411 1
Q ss_pred hhHHHHHHHHHhhhhhhhh-cCCCCccccccchhHHhhhccCCChHHHHHHHHhhhccccCCCCHHHHHhh
Q 005274 453 SYFSLVIRSLAVLEGIAIS-SNPNYKVLGSTYPYIARKVLTDSSPQLKSSLVALLYKEGVFRIDRLESLLT 522 (704)
Q Consensus 453 ~~~~liiRsl~~lEGi~~~-ldP~~~i~~~a~P~i~r~ll~d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~ 522 (704)
-.+. .+.+++.+-.. ++|.| ....|+-.++|+.||-..|..|.+..+.-+|
T Consensus 461 T~~e----r~~t~~d~r~g~ip~~~---------------~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~ 512 (516)
T KOG1033|consen 461 TQFE----RIATLTDIRDGIIPPEF---------------LQDYPEEYTLLQQLLSPSPEERPSAIEVALH 512 (516)
T ss_pred cHHH----HHHhhhhhhcCCCChHH---------------hhcCcHHHHHHHHhcCCCcccCchHHHHhhh
Confidence 1111 12222222111 11111 1456788899999999999999865554444
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=97.59 E-value=0.00082 Score=81.90 Aligned_cols=109 Identities=16% Similarity=0.195 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCC--cEEEEEEecCChhhhHHHHHHHHHHHHHHH
Q 005274 167 PFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSG--RVVAVKVQRPGVQAAISLDIFILHFIAGLI 244 (704)
Q Consensus 167 p~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG--~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~ 244 (704)
+++.+...+.+.+.++. +..-...++-++++.|..+.+|+......+ ..+++|+..++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 36666666666665431 111111134478999999999998875222 468888766542100
Q ss_pred HhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecc-----cceeEEEEeccCCChh
Q 005274 245 RKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQT-----TRKVLIMEWVEGQKLS 317 (704)
Q Consensus 245 ~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~s-----s~~vLVmE~i~G~~L~ 317 (704)
.... +.+|++.+..+. ...++.||+++.... +..++||||++|..+.
T Consensus 81 ----------------~~~~------~~rE~~~l~~L~----~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~ 132 (822)
T PLN02876 81 ----------------SAHA------VEREYQVLRALG----EHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV 132 (822)
T ss_pred ----------------cHHH------HHHHHHHHHHHh----hcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence 0012 233443332222 125688899886433 3578999999997543
No 465
>PRK06148 hypothetical protein; Provisional
Probab=97.58 E-value=0.002 Score=80.19 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=43.8
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCC
Q 005274 161 LQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPG 225 (704)
Q Consensus 161 Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~ 225 (704)
+....|.++.+++.+++++.+|..- .+ ++|++ ..-++|+.+.. +|..+++|+.+|+
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-----~~--~~L~s-~~d~nf~v~~~-~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-----TA--TPLDG-ERDLNFRLTTD-DGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-----EE--eecCC-cCCceEEEEeC-CCCeEEEEEcCCc
Confidence 3345688999999999999999742 22 56754 56899999875 7889999999875
No 466
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.57 E-value=0.00012 Score=79.56 Aligned_cols=65 Identities=23% Similarity=0.226 Sum_probs=48.3
Q ss_pred ceeEEEEeccCCChhhHHh--------hhhHHHHHHHHHHHHHHCCccccCCCCCcEEE--ecCC--cEEEEecCCcc
Q 005274 303 RKVLIMEWVEGQKLSEVKD--------LYLIEVGVYCSFNQLLEKGFYHADPHPGNLFR--SYDG--KLAYIDFGMMG 368 (704)
Q Consensus 303 ~~vLVmE~i~G~~L~d~~~--------~~l~e~~v~~~L~qLh~~G~~H~DphPgNILv--~~dG--~l~liDFGl~~ 368 (704)
..||||...+. +|.++.. ..++-.++..+..+||.+|+-|||+|.+|||+ ++|+ .+++.|||++-
T Consensus 317 tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 317 TLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred eEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 46788876643 4554432 13444677778899999999999999999997 4444 59999999874
No 467
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.56 E-value=0.00069 Score=75.22 Aligned_cols=112 Identities=14% Similarity=0.185 Sum_probs=65.8
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHH
Q 005274 165 ITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLI 244 (704)
Q Consensus 165 ~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~ 244 (704)
.-++..+.+...+.+.+|. +..- +...-++||-|...-||++.+..+++.|+||--.|-++- .
T Consensus 7 y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv--~------------- 69 (409)
T PRK12396 7 YFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI--S------------- 69 (409)
T ss_pred ceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc--C-------------
Confidence 3456666666666655552 1110 223357899999999999998533678999976654321 0
Q ss_pred HhhhhccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCC
Q 005274 245 RKARKFNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQ 314 (704)
Q Consensus 245 ~~~~~~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~ 314 (704)
..+..++ .+..-|...++... + ...-.||++|.......++|||+++..
T Consensus 70 ---~swpL~~--------~R~~~E~~aL~~~~------~----~~P~~VP~vy~~D~e~~~~vMEdL~~~ 118 (409)
T PRK12396 70 ---DEFKLST--------NRIRIESDVLQLEE------E----LAPGLVPKVYLFDSVMNCCVMEDLSDH 118 (409)
T ss_pred ---CCCCCCh--------HHHHHHHHHHHHHH------h----hCCCcCCeEEEECcHHhhHHHHhCccc
Confidence 0111121 12223333333222 1 122349999988888889999999653
No 468
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.43 E-value=0.001 Score=71.15 Aligned_cols=94 Identities=20% Similarity=0.305 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhh
Q 005274 170 SEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARK 249 (704)
Q Consensus 170 ~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~ 249 (704)
|..+.+.|.+.+|.+.. --+.+||+.|.+.++|+.. .+++.+.||+........
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~-------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDM-------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCH--------------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEE--CCCccEEEEecChhhHHH--------------------
Confidence 45677888999987632 1123789999999999987 488999999987432221
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeee--ecccceeEEEEeccCC
Q 005274 250 FNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYV--EQTTRKVLIMEWVEGQ 314 (704)
Q Consensus 250 ~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~--e~ss~~vLVmE~i~G~ 314 (704)
|..|+..++.+.+ ...+.||+++. ++.+..+|+|||++..
T Consensus 56 ---------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 ---------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ---------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ---------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3345555444432 24577888875 3455679999999877
No 469
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.41 E-value=0.0013 Score=73.34 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=53.2
Q ss_pred cCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHH
Q 005274 192 ISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDY 271 (704)
Q Consensus 192 ~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~ 271 (704)
...++||-|....||+... .+..|+||...|.++..-. .+..++ .+-..|...
T Consensus 35 l~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga-----------------~wpl~~--------~R~~~Ea~a 87 (418)
T PLN02756 35 LKIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGE-----------------SWPMTK--------ERAYFEATA 87 (418)
T ss_pred ceEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCc-----------------cccCCc--------cHHHHHHHH
Confidence 4557899999999999886 3567999998876542100 000010 111222222
Q ss_pred HHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccC
Q 005274 272 KIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEG 313 (704)
Q Consensus 272 l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G 313 (704)
++.. .....+.||++|.-.....+++|||+++
T Consensus 88 L~~~----------~~~~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 88 LREH----------GRLCPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred HHHh----------hhcCCCCCCeEEEECCCCCEEEEeecCC
Confidence 2211 1224478999998777889999999988
No 470
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.40 E-value=0.0008 Score=71.76 Aligned_cols=34 Identities=29% Similarity=0.317 Sum_probs=29.4
Q ss_pred CCccccCCCCCcEEEecC----CcEEEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~d----G~l~liDFGl~~~l~~ 372 (704)
.+++|+|+||+||+++.+ +.++++||..++.-.+
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 478999999999999985 8999999999885443
No 471
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.39 E-value=0.0014 Score=71.46 Aligned_cols=29 Identities=34% Similarity=0.559 Sum_probs=26.5
Q ss_pred ccccCCCCCcEEEecCCc-EEEEecCCccc
Q 005274 341 FYHADPHPGNLFRSYDGK-LAYIDFGMMGE 369 (704)
Q Consensus 341 ~~H~DphPgNILv~~dG~-l~liDFGl~~~ 369 (704)
++|+|+||+|++++.+.. ..++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 999999999999998886 89999998874
No 472
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.35 E-value=0.0017 Score=68.95 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=28.1
Q ss_pred CCccccCCCCCcEEEecCCcE-EEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSYDGKL-AYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l-~liDFGl~~~l~~ 372 (704)
..++|+|+||+|++++++|++ .++|||.+..-++
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP 219 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP 219 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence 358999999999999876774 6999999876544
No 473
>PLN02236 choline kinase
Probab=97.30 E-value=0.0031 Score=69.13 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=28.9
Q ss_pred CCccccCCCCCcEEEec-CCcEEEEecCCccccCh
Q 005274 339 KGFYHADPHPGNLFRSY-DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~-dG~l~liDFGl~~~l~~ 372 (704)
..++|+|+|++||++++ ++.+.++||..++.-.+
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence 37899999999999986 47899999999885444
No 474
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.29 E-value=0.0033 Score=68.33 Aligned_cols=29 Identities=28% Similarity=0.394 Sum_probs=25.3
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.|++|+|+|||||+++ + .+.++|||.++.
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 5789999999999994 4 588999999874
No 475
>PRK06149 hypothetical protein; Provisional
Probab=97.19 E-value=0.0039 Score=77.38 Aligned_cols=59 Identities=10% Similarity=0.131 Sum_probs=42.2
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCCh
Q 005274 158 LSLLQDQITPFSSEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGV 226 (704)
Q Consensus 158 L~~Lqd~~pp~~~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i 226 (704)
+..+....|.++.+++.+++++.+|..- + + .+++++. -.+|+.+.. +..+++|+.+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-~----~--~~L~s~~-d~nf~v~t~--~~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLSG-T----L--TELGSQQ-DRNFRVDSD--GGRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCce-E----E--EecCCcC-cceEEEEec--CCcEEEEeCCccC
Confidence 4455666788999999999999998641 1 2 4666544 478988763 4578889998753
No 476
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.00 E-value=0.0094 Score=64.61 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=31.1
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccChh
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEE 373 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~ 373 (704)
..++|+|.|+||+++++++.+.++||++++-=++.
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence 57899999999999999999999999999865543
No 477
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.99 E-value=0.0055 Score=67.38 Aligned_cols=30 Identities=27% Similarity=0.292 Sum_probs=25.1
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
..++|+|+|||||++++++ ++++||-.+..
T Consensus 192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~ 221 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY 221 (370)
T ss_pred ceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence 5789999999999997755 78999976554
No 478
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.86 E-value=0.0068 Score=66.05 Aligned_cols=32 Identities=38% Similarity=0.493 Sum_probs=27.7
Q ss_pred ccccCCCCCcEEEec-CCcEEEEecCCccccCh
Q 005274 341 FYHADPHPGNLFRSY-DGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 341 ~~H~DphPgNILv~~-dG~l~liDFGl~~~l~~ 372 (704)
++|.|++|+||++++ ++++.++||..++.-.+
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCCCcc
Confidence 799999999999975 57899999999886444
No 479
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.70 E-value=0.031 Score=56.68 Aligned_cols=145 Identities=19% Similarity=0.183 Sum_probs=84.9
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
..+||+|+-=.||.- .......|||.+|+....- +....|..+..+. .-.+...+|+++-.
T Consensus 6 ~~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~-------~~~~~~~k~~~~~---------~~~~~~~~E~~~y~ 66 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERR-------RPFKRWLKRLRPK---------SRYRQNRRELRYYK 66 (199)
T ss_pred CcccccCCCceEEEC---CCCCCeEEEEEcccccccc-------ccchhHHHhhccc---------chhHHHHHHHHHHH
Confidence 468999999888853 4677789999998751110 0111122211110 01234455555544
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeec--ccceeEEEEeccCC------ChhhHHhhh----hHHHHHHHHHHHHHHCCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQ--TTRKVLIMEWVEGQ------KLSEVKDLY----LIEVGVYCSFNQLLEKGF 341 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~--ss~~vLVmE~i~G~------~L~d~~~~~----l~e~~v~~~L~qLh~~G~ 341 (704)
+.. . -.+.....+|++|..- +-..-+|+|.+... +|.++.... -....+..+.+++.+++|
T Consensus 67 ~l~------~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~~~I 139 (199)
T PF10707_consen 67 QLS------L-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLDHHI 139 (199)
T ss_pred HHh------h-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHHcCC
Confidence 443 1 2334556677776533 33456889988532 344443211 122344556778899999
Q ss_pred cccCCCCCcEEEecC--C--cEEEEec
Q 005274 342 YHADPHPGNLFRSYD--G--KLAYIDF 364 (704)
Q Consensus 342 ~H~DphPgNILv~~d--G--~l~liDF 364 (704)
+.+|++|+||++... | +++++|-
T Consensus 140 v~~dl~~~NIv~~~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 140 VIRDLNPHNIVVQRRDSGEFRLVLIDG 166 (199)
T ss_pred eecCCCcccEEEEecCCCceEEEEEeC
Confidence 999999999998643 2 5888983
No 480
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.44 E-value=0.027 Score=60.01 Aligned_cols=30 Identities=27% Similarity=0.363 Sum_probs=26.6
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.|++|+|+|++|++++. +.+.++||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 58899999999999987 7899999997653
No 481
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.91 E-value=0.14 Score=53.07 Aligned_cols=96 Identities=15% Similarity=0.216 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhCCChhhhhcccCCccccccccceEEEEEEccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhh
Q 005274 170 SEVAFNTIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARK 249 (704)
Q Consensus 170 ~~~~~~~ie~elG~~~~eiF~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~ 249 (704)
|..+-+.+.+.+|.. ++ -+.++|--|.+-+.|+..+ ...++-||+.....
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d--g~~~~FvK~n~~~~----------------------- 51 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD--GTDPFFVKCNQREQ----------------------- 51 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec--CCcceEEEecchhh-----------------------
Confidence 445566777888865 32 2335677777777776654 56789999965211
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeeccc--ceeEEEEeccCCChh
Q 005274 250 FNTDLQAVVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTT--RKVLIMEWVEGQKLS 317 (704)
Q Consensus 250 ~~~dl~~ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss--~~vLVmE~i~G~~L~ 317 (704)
+--|..|+..++.+++ ...|.||+++...++ ..||||||++-+++.
T Consensus 52 ------------------~~~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 52 ------------------LSMFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ------------------HHHHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 1135566666655544 245999999876654 468999999887665
No 482
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=95.87 E-value=0.069 Score=54.34 Aligned_cols=55 Identities=18% Similarity=0.337 Sum_probs=39.7
Q ss_pred eeEEEEeccCCChhhHHhhhhHHHHHHHHHHHHHHCCccccCCCCCcEEEecCCcEEEEecCCc
Q 005274 304 KVLIMEWVEGQKLSEVKDLYLIEVGVYCSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMM 367 (704)
Q Consensus 304 ~vLVmE~i~G~~L~d~~~~~l~e~~v~~~L~qLh~~G~~H~DphPgNILv~~dG~l~liDFGl~ 367 (704)
+-+|.||+++..-....+ -..+..-+..+|..||+-+|+++.|.. +| +++|||.+
T Consensus 152 ~aIVKD~v~~~~~~~~~~----~~~~~~dl~~~~k~gI~~~Dv~~~ny~---~G--~lvDfs~~ 206 (207)
T PF13095_consen 152 RAIVKDFVPDDPPLQIRD----IPQMLRDLKILHKLGIVPRDVKPRNYR---GG--KLVDFSSS 206 (207)
T ss_pred EEEEEeecCCccccchhH----HHHHHHHHHHHHHCCeeeccCcccccc---CC--EEEecccC
Confidence 458999998766211111 134556678899999999999999996 45 57899864
No 483
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=95.64 E-value=0.00092 Score=78.48 Aligned_cols=169 Identities=15% Similarity=0.160 Sum_probs=102.1
Q ss_pred ccccccccceEEEEEEcc-CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLRQ-SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~-tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
++||+|++++|-.+.... +...+|+|.....- --..+..++..|.+..+
T Consensus 26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~------------------------------~~~~~~~~i~~e~~~~~ 75 (601)
T KOG0590|consen 26 RSIGKGSFSSSALASNSRDPESSSATKPISIPP------------------------------KSEDSSEHIDTETDIQK 75 (601)
T ss_pred ccccccccchhhhhhhcCCCcceeeccCCCCCC------------------------------CccchhhhcCccccccc
Confidence 569999999998887742 22335555432110 00122334444555444
Q ss_pred HHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHH-hh----------hhHHHHHHHHHHHHH-HCCc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVK-DL----------YLIEVGVYCSFNQLL-EKGF 341 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~-~~----------~l~e~~v~~~L~qLh-~~G~ 341 (704)
...+ +.++.-..-.+......++.+||.+|+.+.+.. .. ...-.+...++.++| +.|+
T Consensus 76 ~~s~----------h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~ 145 (601)
T KOG0590|consen 76 KLSK----------HSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV 145 (601)
T ss_pred cccc----------cccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc
Confidence 4442 122211111233456678999999998887654 21 112245566778889 9999
Q ss_pred cccCCCCCcEEEecCC-cEEEEecCCccccCh-hHHH----HHHH-----HHHH-hhccChhHHHHHHHhcCCC
Q 005274 342 YHADPHPGNLFRSYDG-KLAYIDFGMMGEFKE-ELRE----GFIE-----ACLH-LVNRDFDALAKDFVTLGLL 403 (704)
Q Consensus 342 ~H~DphPgNILv~~dG-~l~liDFGl~~~l~~-~~r~----~~~~-----~~~~-l~~~d~~~la~d~~slG~l 403 (704)
.|+|++|.|.+++..| .++..|||++..... .... ..++ .... .....|.+...|.|+.|++
T Consensus 146 ~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~ 219 (601)
T KOG0590|consen 146 THRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV 219 (601)
T ss_pred ccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence 9999999999999999 999999999987665 2111 0111 1111 2222566667778888875
No 484
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.51 E-value=0.026 Score=59.40 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=26.8
Q ss_pred ccccccccceEEEEEEccCCcEEEEEEecCCh
Q 005274 195 EPVAAASLGQVYQARLRQSGRVVAVKVQRPGV 226 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i 226 (704)
.++..|+.+.|+.++.. +|+++++|+..|+-
T Consensus 8 ~~~~~g~~s~V~pv~~~-dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRA-DGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcC-CCCeEEEEecCCcc
Confidence 46778999999999976 89999999998763
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=95.50 E-value=0.0031 Score=72.00 Aligned_cols=139 Identities=18% Similarity=0.234 Sum_probs=89.2
Q ss_pred ccccc--cccceEEEEEE--ccCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHH
Q 005274 195 EPVAA--ASLGQVYQARL--RQSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELD 270 (704)
Q Consensus 195 ~PIgs--GS~GQVyrA~l--k~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld 270 (704)
..+|. |++|+|+.++. +.++..+|+|.++--...- .. ..+-.+|.+
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p------------------------~~------~~~k~~~~~ 169 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPP------------------------LD------SKRKLREFL 169 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCc------------------------cc------cccccchhh
Confidence 46888 99999999999 8899999999965211100 00 001112222
Q ss_pred HHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCCChhhHHhh--------hhHH--HHHHH----HHHHH
Q 005274 271 YKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQKLSEVKDL--------YLIE--VGVYC----SFNQL 336 (704)
Q Consensus 271 ~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~~L~d~~~~--------~l~e--~~v~~----~L~qL 336 (704)
..+- ...+.+.+.-...|+.++..++-+|+|. ..+..+... .+.+ ..... ++..+
T Consensus 170 s~~~----------i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~ 238 (524)
T KOG0601|consen 170 SHHK----------IDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL 238 (524)
T ss_pred cccc----------cCccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhccccccccc
Confidence 2111 1112222223345777888899999995 444443211 0111 12223 67788
Q ss_pred HHCCccccCCCCCcEEEecC-CcEEEEecCCccccChhH
Q 005274 337 LEKGFYHADPHPGNLFRSYD-GKLAYIDFGMMGEFKEEL 374 (704)
Q Consensus 337 h~~G~~H~DphPgNILv~~d-G~l~liDFGl~~~l~~~~ 374 (704)
|..+++|-|++|.|++...+ ..+++.|||++..+.+..
T Consensus 239 hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~ 277 (524)
T KOG0601|consen 239 HSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN 277 (524)
T ss_pred CCCcccccccchhheecccccceeecCCcceeEEccCCc
Confidence 99999999999999999999 778899999999887653
No 486
>PRK10271 thiK thiamine kinase; Provisional
Probab=95.48 E-value=0.012 Score=59.11 Aligned_cols=32 Identities=38% Similarity=0.514 Sum_probs=27.8
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccCh
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKE 372 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~ 372 (704)
..+|+|+||+|++++++| ++++||+.++.-++
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp 109 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI 109 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence 458999999999998777 99999999986554
No 487
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.43 E-value=0.067 Score=57.78 Aligned_cols=188 Identities=20% Similarity=0.221 Sum_probs=101.9
Q ss_pred hhhcccCCccccccccceEEEEEEc--c--------CCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHH
Q 005274 187 ELFSEISPEPVAAASLGQVYQARLR--Q--------SGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQA 256 (704)
Q Consensus 187 eiF~~~~~~PIgsGS~GQVyrA~lk--~--------tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ 256 (704)
.+|+.++. .|+.|--+.|.-|.-- . .-+.+||||.+--+.+--.+|-+|---+ ++-.++. ..+...
T Consensus 251 gvle~i~G-iIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDf-RFKDRFS--K~NpR~ 326 (531)
T KOG2269|consen 251 GVLESIDG-IISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDF-RFKDRFS--KQNPRG 326 (531)
T ss_pred hhHHhhhh-hhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccch-hhhhhhc--ccCcHH
Confidence 45566654 5777777777776321 0 1135778876543333223332221000 0000110 123334
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCcceeeceeeeecccceeEEEEeccCC-----ChhhHH----hhhhHHH
Q 005274 257 VVDEWASSLFRELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKVLIMEWVEGQ-----KLSEVK----DLYLIEV 327 (704)
Q Consensus 257 ivde~~~~l~~Eld~l~Ea~n~~~f~~~~~~~~~V~vP~v~~e~ss~~vLVmE~i~G~-----~L~d~~----~~~l~e~ 327 (704)
++.-|+ .+|..|+.++.+.- +.+|.++. -.+.||||.||... +|.++. ..+-+..
T Consensus 327 i~~mWA---------EkEmhNL~RMq~~G-----lpcP~vV~--lkkhvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~ 390 (531)
T KOG2269|consen 327 ILKMWA---------EKEMHNLSRMQKHG-----LPCPQVVK--LKKHVLVMSFIGDQGLAAPKLKNVELTDDERRNAYD 390 (531)
T ss_pred HHHHHH---------HHHHHHHHHHHhcC-----CCCCceee--eecceEEEEeecCCCCCCccccccccChHHHHHHHH
Confidence 444443 35667777776632 33344332 45889999999432 222221 1122335
Q ss_pred HHHHHHHHH-HHCCccccCCCCCcEEEecCCcEEEEecCCccccChhHHHHHHHHHHHhhccChhHHHHHHHhcCC
Q 005274 328 GVYCSFNQL-LEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELREGFIEACLHLVNRDFDALAKDFVTLGL 402 (704)
Q Consensus 328 ~v~~~L~qL-h~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~~~~r~~~~~~~~~l~~~d~~~la~d~~slG~ 402 (704)
++...+.+| +++-++|+|+.--|+|..++ ++.+||-..+.+.+...- ..++.+|...+..-+-..|.
T Consensus 391 q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~g-Kvw~IDVsQsvep~HP~~-------LeFL~RDc~Ni~~FF~r~G~ 458 (531)
T KOG2269|consen 391 QVQSIMCRLYKECLLVHADLSEYNLLWTPG-KVWVIDVSQSVEPSHPRS-------LEFLTRDCQNIITFFTRIGT 458 (531)
T ss_pred HHHHHHHHHHHhhheeecchhhhhheecCC-ceEEEechhccCCCCcch-------hHHHHHHHHHHHHHHHhcCC
Confidence 666666666 67899999999999999775 999999877665543321 12344555555544444453
No 488
>PTZ00384 choline kinase; Provisional
Probab=95.42 E-value=0.21 Score=55.72 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=25.4
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
..++|.|+++|||+.+ ++.+.++||-.++.
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~ 256 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGF 256 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEeccccC
Confidence 5789999999999875 55699999987764
No 489
>PTZ00296 choline kinase; Provisional
Probab=95.10 E-value=0.31 Score=55.40 Aligned_cols=32 Identities=28% Similarity=0.299 Sum_probs=26.1
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
..++|.|+.++|||.+. +.+.++||-.++.-.
T Consensus 284 ~VfCHNDl~~~NiL~~~-~~l~LIDfEYAg~nd 315 (442)
T PTZ00296 284 IVFCHNDLQENNIINTN-KCLRLIDFEYSGYNF 315 (442)
T ss_pred eeEEeCCCCccceeecC-CCEEEEeeccccccc
Confidence 46899999999998754 449999998887543
No 490
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.44 E-value=0.1 Score=57.34 Aligned_cols=175 Identities=20% Similarity=0.142 Sum_probs=92.2
Q ss_pred cccCCccccccccceEEEEEEccCCcEEEEEEecCCh-hhhHHHHHHHHHHHHHHHHhhhh-----------ccCChH-H
Q 005274 190 SEISPEPVAAASLGQVYQARLRQSGRVVAVKVQRPGV-QAAISLDIFILHFIAGLIRKARK-----------FNTDLQ-A 256 (704)
Q Consensus 190 ~~~~~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP~i-~~~i~~Dl~ilr~la~~~~~~~~-----------~~~dl~-~ 256 (704)
...+..||+.|..+-++.|+++ +...++=++..-+. ......|..+++.+..+...-.. +..++. .
T Consensus 155 ~~kk~~pvpDqvs~dk~Q~k~~-~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~dvk~fan~~~v~~vlgl~~~ln~~ 233 (488)
T COG5072 155 QTKKICPVPDQVSSDKIQAKLA-DSTSLVSLVSPFGLPGNAQDADVLNLVQILQWCDVKGFANLHQVVVVLGLYPSLNLE 233 (488)
T ss_pred cccccccCcccchhhhhhhhhc-cCcceeeccccccCCCCccccchHHHHHHHHHhhhhhhccccceeEEecccccccch
Confidence 3445569999999999999997 56666666543221 12345566666666655442111 111111 0
Q ss_pred HHHHHHHHHHHHHHH-------------------HHHHhhHHHHHHH-hcCCcceeeceeee-ecccceeEEEEeccCCC
Q 005274 257 VVDEWASSLFRELDY-------------------KIEAKNGLKFRQL-YGGIQDVLIPEMYV-EQTTRKVLIMEWVEGQK 315 (704)
Q Consensus 257 ivde~~~~l~~Eld~-------------------l~Ea~n~~~f~~~-~~~~~~V~vP~v~~-e~ss~~vLVmE~i~G~~ 315 (704)
--+.+....-+|+++ +.|..+. +++.. ....+..--|.++. +.+--.|++|++- |++
T Consensus 234 ~s~qlssn~~q~~i~kkvs~g~~~~~~~d~~fls~~ele~l-~L~qw~~~g~~~~e~~~vv~~de~~y~yl~~kdh-gt~ 311 (488)
T COG5072 234 ESDQLSSNNWQENICKKVSLGSTQDYTVDCLFLSLTELEHL-ELRQWRECGSVFLETLKVVSLDETLYLYLHFKDH-GTP 311 (488)
T ss_pred hhhHHhhhcchheeecccccccchhhhhhhhhhhccccchh-hhhhhhhccchhhhcceEEecCCceEEEEEEecC-Cce
Confidence 001111111122211 1223332 11111 22223334455555 3334457888876 777
Q ss_pred hhhHHhhhhHHH--HHH--HHHHHHHH--CCccccCCCCCcEEEecCCcEEEEecCCcc
Q 005274 316 LSEVKDLYLIEV--GVY--CSFNQLLE--KGFYHADPHPGNLFRSYDGKLAYIDFGMMG 368 (704)
Q Consensus 316 L~d~~~~~l~e~--~v~--~~L~qLh~--~G~~H~DphPgNILv~~dG~l~liDFGl~~ 368 (704)
+.-....+..+. -+. ..+-+..+ .-+=|||+|-+||+++ +|+|.++||-+++
T Consensus 312 is~ik~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsR 369 (488)
T COG5072 312 ISIIKADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSR 369 (488)
T ss_pred eeeeecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeee
Confidence 765433222221 011 11223333 5678999999999999 9999999999987
No 491
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=94.33 E-value=0.036 Score=63.49 Aligned_cols=133 Identities=22% Similarity=0.237 Sum_probs=84.2
Q ss_pred ccccccccceEEEEEEc-cCCcEEEEEEecCChhhhHHHHHHHHHHHHHHHHhhhhccCChHHHHHHHHHHHHHHHHHHH
Q 005274 195 EPVAAASLGQVYQARLR-QSGRVVAVKVQRPGVQAAISLDIFILHFIAGLIRKARKFNTDLQAVVDEWASSLFRELDYKI 273 (704)
Q Consensus 195 ~PIgsGS~GQVyrA~lk-~tG~~VAVKVqrP~i~~~i~~Dl~ilr~la~~~~~~~~~~~dl~~ivde~~~~l~~Eld~l~ 273 (704)
..||.|.|+-|+....+ .++..+++|-...+... ...|++-|... |+
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~-~~~di~sl~ev------------------------------~l- 318 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT-FASDIFSLGEV------------------------------IL- 318 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccc-hHhhhcchhhh------------------------------hH-
Confidence 57999999999988865 57888999976544322 22222211110 00
Q ss_pred HHhhHHHHHHHhcCCcceeece--eeeecccceeEEEEeccCCChhhHHhh---------hhHHHHHHHHHHHHHHCCcc
Q 005274 274 EAKNGLKFRQLYGGIQDVLIPE--MYVEQTTRKVLIMEWVEGQKLSEVKDL---------YLIEVGVYCSFNQLLEKGFY 342 (704)
Q Consensus 274 Ea~n~~~f~~~~~~~~~V~vP~--v~~e~ss~~vLVmE~i~G~~L~d~~~~---------~l~e~~v~~~L~qLh~~G~~ 342 (704)
|+. ...+ ..++. .-|..-...++.-|||+|+........ ...-.++...+..+|+.+++
T Consensus 319 ~~~--------l~~~--~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~ 388 (524)
T KOG0601|consen 319 EAI--------LGSH--LPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFV 388 (524)
T ss_pred hhH--------hhcc--cccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhh
Confidence 000 0000 11111 234455667799999999887654321 11224555667788999999
Q ss_pred ccCCCCCcEEEecC-CcEEEEecCCccc
Q 005274 343 HADPHPGNLFRSYD-GKLAYIDFGMMGE 369 (704)
Q Consensus 343 H~DphPgNILv~~d-G~l~liDFGl~~~ 369 (704)
|.|++|.||++..+ +-.++.|||..+.
T Consensus 389 ~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 389 HLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cccccccceeeccchhhhhccccccccc
Confidence 99999999999886 6778899998764
No 492
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=93.34 E-value=0.43 Score=55.84 Aligned_cols=72 Identities=15% Similarity=0.169 Sum_probs=53.5
Q ss_pred ecccceeEEEEeccCCChhhHHhh------hhHHHHHHHHHHHHH-HCCccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 299 EQTTRKVLIMEWVEGQKLSEVKDL------YLIEVGVYCSFNQLL-EKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 299 e~ss~~vLVmE~i~G~~L~d~~~~------~l~e~~v~~~L~qLh-~~G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
+..+..|||+|.+. +|..+.+. .+.-.++.++|..|| +.+++|+.+--+.++++.+|+-+|.+|-.+...+
T Consensus 79 e~~~~~ylvTErV~--Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~ 156 (690)
T KOG1243|consen 79 EEEGTLYLVTERVR--PLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS 156 (690)
T ss_pred cccCceEEEeeccc--cHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence 44567899999985 44433221 122255667777886 6899999999999999999999999999887654
Q ss_pred h
Q 005274 372 E 372 (704)
Q Consensus 372 ~ 372 (704)
.
T Consensus 157 ~ 157 (690)
T KOG1243|consen 157 G 157 (690)
T ss_pred c
Confidence 3
No 493
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=93.17 E-value=0.34 Score=48.67 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=52.9
Q ss_pred eeceeeeecccceeEEEEeccCCChh-------hHHh-----hhhHHHHHHHHHHHHHH---CCccccCCCCCcEEEecC
Q 005274 292 LIPEMYVEQTTRKVLIMEWVEGQKLS-------EVKD-----LYLIEVGVYCSFNQLLE---KGFYHADPHPGNLFRSYD 356 (704)
Q Consensus 292 ~vP~v~~e~ss~~vLVmE~i~G~~L~-------d~~~-----~~l~e~~v~~~L~qLh~---~G~~H~DphPgNILv~~d 356 (704)
.+|+++. +|+ .+.++||+..+++. ++.. +.-+..++...+..+.. ..+.-+|.+|+|+-++.+
T Consensus 21 ~~pk~lG-~CG-~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~ 98 (188)
T PF12260_consen 21 PFPKLLG-SCG-RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD 98 (188)
T ss_pred CCCCeee-ECC-CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence 6777664 454 46688999866442 3211 11122445555555554 457889999999999999
Q ss_pred CcEEEEecCCccccC
Q 005274 357 GKLAYIDFGMMGEFK 371 (704)
Q Consensus 357 G~l~liDFGl~~~l~ 371 (704)
|+++++|...+...+
T Consensus 99 ~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 99 GRLKLIDLDDVFVED 113 (188)
T ss_pred CcEEEEechhcchhH
Confidence 999999999887544
No 494
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=92.65 E-value=0.059 Score=54.45 Aligned_cols=33 Identities=36% Similarity=0.594 Sum_probs=23.8
Q ss_pred CCccccCCCCCcEEE-ecCCcEEEEecCCccccC
Q 005274 339 KGFYHADPHPGNLFR-SYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 339 ~G~~H~DphPgNILv-~~dG~l~liDFGl~~~l~ 371 (704)
..+.|.|++||||++ +.++++++|||-.++.-.
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~ 176 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGYND 176 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EEEE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhhcc
Confidence 578999999999999 889999999999988544
No 495
>COG4857 Predicted kinase [General function prediction only]
Probab=91.63 E-value=0.71 Score=49.13 Aligned_cols=31 Identities=19% Similarity=0.315 Sum_probs=25.6
Q ss_pred CccccccccceEEEEEEccCCcEEEEEEecC
Q 005274 194 PEPVAAASLGQVYQARLRQSGRVVAVKVQRP 224 (704)
Q Consensus 194 ~~PIgsGS~GQVyrA~lk~tG~~VAVKVqrP 224 (704)
-+-||-|.+--|+....+..|+..+||.--|
T Consensus 35 vkEIGDGNlNyvF~V~~~~~~ka~ivKQA~p 65 (408)
T COG4857 35 VKEIGDGNLNYVFIVEGKIGGKAAIVKQALP 65 (408)
T ss_pred EEEecCCceeEEEEEecCCCCeehhhhhhhh
Confidence 3569999999999999988888888886544
No 496
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=91.30 E-value=0.15 Score=51.27 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=29.0
Q ss_pred HCCccccCCCCCcEEEecCC-----cEEEEecCCccccCh
Q 005274 338 EKGFYHADPHPGNLFRSYDG-----KLAYIDFGMMGEFKE 372 (704)
Q Consensus 338 ~~G~~H~DphPgNILv~~dG-----~l~liDFGl~~~l~~ 372 (704)
...++|+|++++|+++..++ .+.++||..++.-++
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p 158 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP 158 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence 45789999999999998654 699999999886554
No 497
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=90.28 E-value=0.21 Score=52.99 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=28.4
Q ss_pred CccccCCCCCcEEEecCCcEEEEecCCccccC
Q 005274 340 GFYHADPHPGNLFRSYDGKLAYIDFGMMGEFK 371 (704)
Q Consensus 340 G~~H~DphPgNILv~~dG~l~liDFGl~~~l~ 371 (704)
-++|+|++|+|++.+++|++.++||--++--+
T Consensus 154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D 185 (269)
T COG0510 154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLND 185 (269)
T ss_pred eeecCCCCccceEEcCCCcEEEEecccCCCcc
Confidence 58999999999999999999999998777433
No 498
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=89.40 E-value=0.19 Score=53.94 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=28.4
Q ss_pred CCccccCCCCCcEEEecCCcEEEEecCCccc
Q 005274 339 KGFYHADPHPGNLFRSYDGKLAYIDFGMMGE 369 (704)
Q Consensus 339 ~G~~H~DphPgNILv~~dG~l~liDFGl~~~ 369 (704)
.|++|+|++++|++++++|.+.++||-.+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 4899999999999999999999999988764
No 499
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=89.09 E-value=4.8 Score=46.37 Aligned_cols=71 Identities=13% Similarity=0.192 Sum_probs=52.2
Q ss_pred cceeEEEEeccCC-ChhhHH-----------------hhhhHH-------HHHHHHHHHHHHCCccccCCCCCcEEEecC
Q 005274 302 TRKVLIMEWVEGQ-KLSEVK-----------------DLYLIE-------VGVYCSFNQLLEKGFYHADPHPGNLFRSYD 356 (704)
Q Consensus 302 s~~vLVmE~i~G~-~L~d~~-----------------~~~l~e-------~~v~~~L~qLh~~G~~H~DphPgNILv~~d 356 (704)
...+||.+|.++. +|.+.- .....| .++..+|..+|+.|+--.-+.|.+|+++.+
T Consensus 350 ~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~ 429 (655)
T KOG3741|consen 350 LSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK 429 (655)
T ss_pred ceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc
Confidence 4578999998763 444431 011223 455567788899999999999999999988
Q ss_pred CcEEEEecCCccccCh
Q 005274 357 GKLAYIDFGMMGEFKE 372 (704)
Q Consensus 357 G~l~liDFGl~~~l~~ 372 (704)
-+|+|.-.|.+.-+.+
T Consensus 430 ~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 430 MRIRISGCGIMDVLQE 445 (655)
T ss_pred ceEEEecccceeeecC
Confidence 8999999998876543
No 500
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=88.41 E-value=0.21 Score=59.79 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=30.5
Q ss_pred CCChHHHHHHHHhhhccccCCCCHHHHHhhhhHH
Q 005274 493 DSSPQLKSSLVALLYKEGVFRIDRLESLLTESLR 526 (704)
Q Consensus 493 d~sp~lr~lL~~lL~~d~~~R~~rle~Ll~~~~~ 526 (704)
..++.+.+++..||.+||..|+++-+.|-|+.+.
T Consensus 605 ~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~ 638 (669)
T cd05610 605 KLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFH 638 (669)
T ss_pred cCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhc
Confidence 4578899999999999999999999999998863
Done!