Your job contains 1 sequence.
>005276
MGSKNKNKRKNRSKDGSDNNKNKKIITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMF
TDKNFASSTAPFDKRGKPKKNLKTSKSSLQHYYRIEAEDKKSDEDEEIEEEERRNETDSE
SELKEAADVSSGSGTEEEDDDDVSESTTDDEEEDVDFDEGPEEEEEAIPEIDNETHRLAI
VNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVRGPVGLFDSQNEN
SDDEDNDEIDEEKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRF
IPDTMEFKYPPRDVATEAPANYGGLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQ
VAELELKEFLASDESETDDEDDNVADEQSDKKSKKQDKYRALLESGDGSDEDGEEDGQDM
EVTFNTGLEDISKRILEKKDKKSETIWEAYLRKRREKKKAGKNKSKYSSDDEASDTDREA
IEEPDDFFVEEPKGKKGEEAGGNHRREEKEQQDTDKEATASTAELELLLADDKGAENGLK
GYNMKPKKRKGKKGKEVPDEDKIPTADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQ
IAQKKQKGDQREQVIRESTKIPTNAQMPSDDPDRHRHMKSDVSSLKRENHEVSLLVKSLK
MKSKQIQLPSEPKKDEGVQSKEVEENNGLSNLVQSLKKTKKLKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005276
(704 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102127 - symbol:AT3G01160 "AT3G01160" species... 1038 6.5e-123 2
ZFIN|ZDB-GENE-030131-4917 - symbol:esf1 "ESF1, nucleolar ... 457 2.7e-66 3
UNIPROTKB|F1SBJ2 - symbol:ESF1 "Uncharacterized protein" ... 459 1.2e-64 3
MGI|MGI:1913830 - symbol:Esf1 "ESF1, nucleolar pre-rRNA p... 466 3.7e-64 3
RGD|1306067 - symbol:Esf1 "ESF1, nucleolar pre-rRNA proce... 468 4.3e-64 3
UNIPROTKB|E1BKI4 - symbol:ESF1 "Uncharacterized protein" ... 455 6.6e-64 3
UNIPROTKB|Q9H501 - symbol:ESF1 "ESF1 homolog" species:960... 459 1.2e-63 3
UNIPROTKB|E2REW3 - symbol:ESF1 "Uncharacterized protein" ... 461 3.7e-63 3
FB|FBgn0024364 - symbol:CG11417 species:7227 "Drosophila ... 421 5.2e-54 3
CGD|CAL0000677 - symbol:orf19.2319 species:5476 "Candida ... 300 2.8e-51 4
SGD|S000002773 - symbol:ESF1 "Nucleolar protein involved ... 284 7.1e-51 4
ASPGD|ASPL0000065711 - symbol:AN7503 species:162425 "Emer... 248 1.7e-46 4
DICTYBASE|DDB_G0269312 - symbol:DDB_G0269312 "unknown" sp... 272 5.3e-45 5
POMBASE|SPBC1734.01c - symbol:esf1 "pre-rRNA processing p... 316 1.9e-44 3
WB|WBGene00010231 - symbol:F58B3.4 species:6239 "Caenorha... 294 3.9e-36 3
UNIPROTKB|H9L000 - symbol:H9L000 "Uncharacterized protein... 129 1.4e-07 1
>TAIR|locus:2102127 [details] [associations]
symbol:AT3G01160 "AT3G01160" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0000741
"karyogamy" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] InterPro:IPR012580 Pfam:PF08159
GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 EMBL:AC008261
HOGENOM:HOG000182523 OMA:DMEITFT IPI:IPI00541611 RefSeq:NP_566132.2
UniGene:At.28757 STRING:Q9MAC6 PRIDE:Q9MAC6
EnsemblPlants:AT3G01160.1 GeneID:820504 KEGG:ath:AT3G01160
TAIR:At3g01160 InParanoid:Q9MAC6 PhylomeDB:Q9MAC6
ProtClustDB:CLSN2696804 Genevestigator:Q9MAC6 Uniprot:Q9MAC6
Length = 713
Score = 1038 (370.5 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 236/497 (47%), Positives = 295/497 (59%)
Query: 168 IPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEV 227
IP I ETHRLAIVNMDWRHV A DL V+L+SFLPKDG+ILSVAVYPSEFG++RMKEEE+
Sbjct: 192 IPLIQEETHRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEI 251
Query: 228 RGPVGLFD-----SQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYR 282
GPV D S KLRAYE SRL+YY+AV ECDSSATADYLY+
Sbjct: 252 HGPVIDGDKKNDASDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADYLYK 311
Query: 283 ACDGVEFERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKALQHSNVQLSWD 342
+CDG+EFERSSNKLDLRFIPD+MEFK+PPRD+A+EAPA Y GLDF ++ALQ S V LSWD
Sbjct: 312 SCDGIEFERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQMSKVNLSWD 371
Query: 343 DDEPDRVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXX--NVADEXXXXXXXXXXXYR 400
+DEP R+KTL +KFN +Q+A LE+KEFLA N YR
Sbjct: 372 EDEPHRIKTLNQKFNPEQLANLEMKEFLASDESDSDEEDDLGNEVINQSKKKDKKKDKYR 431
Query: 401 ALLXXXXXXXXXXXXXX--QDMEVTFNTGLEDISKRILEKKDKKSETIWEAYLXXXXXXX 458
AL+ QDMEVTFNTGLED+SK IL+KKD +SE++WE YL
Sbjct: 432 ALIEAEDVDSDKDLEEENDQDMEVTFNTGLEDLSKEILKKKDNQSESVWETYLRQRREKK 491
Query: 459 XXXXXXX----XXXXDDEASDTDREAIEEP--DDFFVXXXXXXXXXXXXXNHRREEKEQQ 512
DD+ + DR+A+++ DDFF+ ++EE +
Sbjct: 492 RARKNKQKDDDSSPDDDDDYNIDRKAVKDDGDDDFFMEEPPLKKKKKEGKT-KKEEVAAE 550
Query: 513 DTDKXXXXXXXXXXXXXXDDKGAENGLXXXXXXXXXXXXXXXXEVPDEDKIPTADYDDPR 572
+ + ++ G NGL EDKIP A+ DDPR
Sbjct: 551 EKSRAELELLLAD-----ENAGDGNGLKGYNIKRKAKKGKTDIS---EDKIPAAELDDPR 602
Query: 573 FSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQ---KGDQREQVIRESTKIPTNAQMPS 629
FSALF+SP +ALDPTDPQFKRSA YARQ+A K++ KG + + +E ++ ++ + S
Sbjct: 603 FSALFSSPYYALDPTDPQFKRSATYARQLALKQKEDPKGHEDVKAPKEKQELNSDGNLGS 662
Query: 630 DDPDRHRHMKSDVSSLK 646
+RH + S V SLK
Sbjct: 663 KK-ERHE-LTSTVKSLK 677
Score = 191 (72.3 bits), Expect = 6.5e-123, Sum P(2) = 6.5e-123
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
+I D RF+S H+DP+F+ + ++ SKVAIDSRF MF DK FA+ +AP DKRGK ++ T
Sbjct: 30 MIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGK-RRTGGT 88
Query: 85 SKSSLQHYYR 94
K SL+ +YR
Sbjct: 89 GKDSLREFYR 98
Score = 37 (18.1 bits), Expect = 9.4e-11, Sum P(2) = 9.4e-11
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 505 RREEKEQQDTDK 516
+ EE+E+ DTD+
Sbjct: 163 QEEEEEEDDTDE 174
>ZFIN|ZDB-GENE-030131-4917 [details] [associations]
symbol:esf1 "ESF1, nucleolar pre-rRNA processing
protein, homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012580 Pfam:PF08159
ZFIN:ZDB-GENE-030131-4917 GO:GO:0005634 CTD:51575
HOGENOM:HOG000182523 HOVERGEN:HBG051149 OMA:IKTKTEQ
GeneTree:ENSGT00390000004881 EMBL:CU138540 IPI:IPI00920886
RefSeq:NP_956039.2 UniGene:Dr.75235 Ensembl:ENSDART00000146612
GeneID:326718 NextBio:20809699 ArrayExpress:B8JKQ1 Bgee:B8JKQ1
Uniprot:B8JKQ1
Length = 757
Score = 457 (165.9 bits), Expect = 2.7e-66, Sum P(3) = 2.7e-66
Identities = 91/204 (44%), Positives = 126/204 (61%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D+ + RLA+ NMDW +KA DLL + +SF PK G +LSV VYPSEFG +R+ E+ +
Sbjct: 227 PRSDDTSRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVLSVTVYPSEFGKERIHAEQTQ 286
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GP+ L K+R Y+ RLRYYYAVVECDS+ TA +Y CDG+E
Sbjct: 287 GPLELSSLPENPDADTDEQRIYREKVRDYQFKRLRYYYAVVECDSAETASKIYEECDGIE 346
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAP-ANYGGLDFFTKALQHSNVQLSWDDDEPD 347
+E S + +DLRFIPD + F P+D AT+ +Y F + A S V+L+WD+ + D
Sbjct: 347 YETSCSMIDLRFIPDDVTFDDEPKDRATDVDYGSYKPKLFTSTATTTSKVELTWDETDHD 406
Query: 348 RVKTLKRKFNADQVAELELKEFLA 371
RV L RKFN D++ +++ K +LA
Sbjct: 407 RVSALCRKFNKDELLDMDFKAYLA 430
Score = 135 (52.6 bits), Expect = 2.7e-66, Sum P(3) = 2.7e-66
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 28 DSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTSKS 87
D RF+ V DPRF +P ++ K+ ID RF MF D+ F DKRG+P K+ TS
Sbjct: 10 DDRFSKVKKDPRFWEMPNKERKIKIDKRFQSMFHDERFKLKYT-VDKRGRPVKH--TSTE 66
Query: 88 SLQHYYR 94
L+ +Y+
Sbjct: 67 DLKRFYK 73
Score = 130 (50.8 bits), Expect = 2.7e-66, Sum P(3) = 2.7e-66
Identities = 53/227 (23%), Positives = 94/227 (41%)
Query: 419 DMEVTFNTGLEDISKRILEKK--DKKSETIWEAYLXXXXXXXXXXXXXXXXXXDDEASDT 476
+ME+T+ GL++ ++ +++KK K T WE +L + E +
Sbjct: 494 NMEITWVPGLKESTENLVKKKMMGKDRLTPWEEFLEKKKEKKKEKRKGKKEVVEAELQIS 553
Query: 477 DREA---IEEPDDFF---VXXXXXXXXXXXXXNHRREEK----EQQDTDKXXXXXXXXXX 526
D E ++ D FF + N ++EE+ EQ++ ++
Sbjct: 554 DDELPPDVDLSDPFFTEELVSTASLKNKESKKNRKKEEERTPEEQEEMERRKAEMELLMD 613
Query: 527 XXXXD-------DKGAENGLXXXXXXXXXXXXXXXXEVPDEDKIPTADYDDPRFSALFTS 579
D DK E+ E D+ K+ D DPRF A+FTS
Sbjct: 614 DDEDDKHKHFNYDKIVEHQNLSKKKRKKLLKSNTPLEEGDDFKV---DVQDPRFQAMFTS 670
Query: 580 PLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTNAQ 626
L+ LDP+DP +K++ + I ++KQ+ + E+ +E T+ + Q
Sbjct: 671 HLYNLDPSDPAYKKTKA-TQSILEEKQRR-REEKHSQEETRRSKHTQ 715
Score = 62 (26.9 bits), Expect = 3.5e-59, Sum P(3) = 3.5e-59
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 556 EVPDEDKIPTADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVI 615
++ D++ P D DP FT L + + K S ++ +K+++ EQ
Sbjct: 551 QISDDELPPDVDLSDP----FFTEEL--VSTASLKNKES----KKNRKKEEERTPEEQEE 600
Query: 616 RESTKIPTNAQMPSDDPDRHRHMKSD 641
E K M D+ D+H+H D
Sbjct: 601 MERRKAEMELLMDDDEDDKHKHFNYD 626
Score = 51 (23.0 bits), Expect = 5.1e-15, Sum P(3) = 5.1e-15
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 342 DDDEPDRVKTL-----KRKFNADQVAELE 365
DDD+ D KT KR F AD+ AE+E
Sbjct: 83 DDDDEDEEKTEEEQKEKRGFEADKEAEVE 111
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 18/84 (21%), Positives = 36/84 (42%)
Query: 603 QKKQKGDQREQVIRESTKIPTNAQMPSDDPDRHRHMKSDVSSLKRENHEXXXXXXXXXXX 662
+ +Q+ +Q+ Q +E+ K ++ +D D ++ D ++ E
Sbjct: 126 ESEQEEEQKIQRNKEAKKTKKGVRVYEEDEDVESGVEEDDDDDDDDDEEESDSGPDLARG 185
Query: 663 XXQIQLPS-EPKKDEGVQSKEVEE 685
I+ S E ++DEG EVE+
Sbjct: 186 KGNIETSSDEDEEDEG---DEVED 206
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 335 SNVQLSWDDDEPDRVKTLKRKFNADQVAE 363
+ ++L DDDE D+ K FN D++ E
Sbjct: 606 AEMELLMDDDEDDKHK----HFNYDKIVE 630
Score = 37 (18.1 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 20/89 (22%), Positives = 31/89 (34%)
Query: 602 AQKKQKGDQREQVIRESTKIPTNAQMPSDDPDRHRHMKSD-VSSLKRENHEXXXXXXXXX 660
A K +KG + RE K + +D D + +M+ V LK
Sbjct: 459 ASKGKKGSGQIDKYRELLKSIQDKDKKKEDDDNNMNMEITWVPGLKESTENLVKKKMMGK 518
Query: 661 XXXXQ----IQLPSEPKKDEGVQSKEVEE 685
++ E KK++ KEV E
Sbjct: 519 DRLTPWEEFLEKKKEKKKEKRKGKKEVVE 547
>UNIPROTKB|F1SBJ2 [details] [associations]
symbol:ESF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012580
Pfam:PF08159 GO:GO:0005634 CTD:51575 OMA:IKTKTEQ
GeneTree:ENSGT00390000004881 EMBL:CU302386 RefSeq:XP_001926103.3
Ensembl:ENSSSCT00000007748 GeneID:100155396 KEGG:ssc:100155396
Uniprot:F1SBJ2
Length = 858
Score = 459 (166.6 bits), Expect = 1.2e-64, Sum P(3) = 1.2e-64
Identities = 107/299 (35%), Positives = 156/299 (52%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G + SV +YPSEFG QRM+EE+V+
Sbjct: 346 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMQEEQVQ 405
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RL+YYYAVV+CDS TA +Y CDG+E
Sbjct: 406 GPVELLSIPEDAPEKDWTSRE---KLRDYQFKRLKYYYAVVDCDSPETAAKIYEDCDGLE 462
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+DVA+E +FT A + S V+++WD+ + +
Sbjct: 463 FESSCSFIDLRFIPDDITFDDEPKDVASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHE 522
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXX--------NVADEXXXXXXXXX--- 396
R+ TL RKF +++ +++ + +LA NV ++
Sbjct: 523 RITTLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDEVNVEEDGKTKRTQKDDEE 582
Query: 397 --XXYRALLXXXXXXXXXXXXXXQDMEVTFNTGLEDISKRILEKK--DKKSETIWEAYL 451
YR LL +ME+ + GL++ ++ +++ K K T WE +L
Sbjct: 583 QIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFL 641
Score = 131 (51.2 bits), Expect = 1.2e-64, Sum P(3) = 1.2e-64
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I+ D RF V DPRF +P+++ KV ID RF MF DK F + A DKRG+P + T
Sbjct: 7 IMNDQRFRRVTKDPRFWEMPEKERKVKIDKRFRAMFHDKKFKLNYA-VDKRGRPINHSTT 65
Query: 85 SKSSLQHYY 93
L+ +Y
Sbjct: 66 E--DLKRFY 72
Score = 123 (48.4 bits), Expect = 1.2e-64, Sum P(3) = 1.2e-64
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTK-----IPTN 624
D RF A++TS LF LDP+DP FK++ + + +K ++ +Q+EQ + ++TK I
Sbjct: 766 DTRFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQREQKEQELTQATKKKESEIQKE 825
Query: 625 AQMPSDDPDRHRHMKS 640
+Q S DP +KS
Sbjct: 826 SQKKSIDPALSMLIKS 841
Score = 41 (19.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 270 ECDSSATADYLYRACDGVEFERSSNKLDLR-FIPDTMEFKYPPRDVATEAPANYGGLDFF 328
E D S + L R +E S ++ D+ +P+ F++ R++ +AP D
Sbjct: 297 EEDESDSGPDLARGKGNIETS-SEDEEDMADLLPEESGFEHAWRELDKDAPR----ADEI 351
Query: 329 TKALQHSNVQLSWD 342
T+ L N + WD
Sbjct: 352 TRRLAVCN--MDWD 363
>MGI|MGI:1913830 [details] [associations]
symbol:Esf1 "ESF1, nucleolar pre-rRNA processing protein,
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR012580
Pfam:PF08159 MGI:MGI:1913830 GO:GO:0005654 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 CTD:51575 eggNOG:COG5638
HOGENOM:HOG000182523 HOVERGEN:HBG051149 OMA:IKTKTEQ
OrthoDB:EOG4MKNFT ChiTaRS:ESF1 EMBL:AK132230 IPI:IPI00169521
RefSeq:NP_001074559.1 UniGene:Mm.21228 ProteinModelPortal:Q3V1V3
STRING:Q3V1V3 PhosphoSite:Q3V1V3 PRIDE:Q3V1V3
Ensembl:ENSMUST00000046030 GeneID:66580 KEGG:mmu:66580
GeneTree:ENSGT00390000004881 InParanoid:Q3V1V3 NextBio:322060
Bgee:Q3V1V3 Genevestigator:Q3V1V3 GermOnline:ENSMUSG00000045624
Uniprot:Q3V1V3
Length = 845
Score = 466 (169.1 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 112/301 (37%), Positives = 154/301 (51%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G + SV +YPSEFG +RMKEE+V+
Sbjct: 335 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKERMKEEQVQ 394
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RL+YYYAV ECDS TA +Y CDG+E
Sbjct: 395 GPVELLSIPEDAPEKDWASRE---KLRDYQFKRLKYYYAVAECDSPETASKIYEDCDGLE 451
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+DVA E +FT A + S V+++WD+ + +
Sbjct: 452 FESSCSFIDLRFIPDDITFDDEPKDVALEVDLTAYKPKYFTSAAMGTSTVEITWDETDHE 511
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXX--------NVADEXXXXXXXXX--- 396
R+ TL RKF D++ +++ + +LA N+ ++
Sbjct: 512 RITTLNRKFKKDELLDMDFQAYLASSSEDEEEVEEAPEGEEGVNIGEDGKTKKSQKDDEE 571
Query: 397 --XXYRALLXXXXXXXXXXXXXXQDMEVTFNTGL----EDISKRILEKKDKKSETIWEAY 450
YR LL +ME+ + GL E++ K LE KDK T WE +
Sbjct: 572 QIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKL--TPWEQF 629
Query: 451 L 451
L
Sbjct: 630 L 630
Score = 131 (51.2 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I+ D RF V DPRF +P+++ KV ID RF MF DK F + A DKRG+P + T
Sbjct: 7 IMDDQRFRRVSKDPRFWEMPEKERKVKIDKRFRAMFHDKKFKLNYA-VDKRGRPISHSTT 65
Query: 85 SKSSLQHYY 93
L+ +Y
Sbjct: 66 E--DLKRFY 72
Score = 110 (43.8 bits), Expect = 3.7e-64, Sum P(3) = 3.7e-64
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTNAQMPS 629
D RF A++TS LF LDP+DP FK++ + + +K + +++E+++ ++ + AQ +
Sbjct: 753 DARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARHRERKEELLIQAVE---RAQQDT 809
Query: 630 DDPDRHRHMKSDVSSL 645
P + + M +S L
Sbjct: 810 GKPTQKQPMDPALSML 825
>RGD|1306067 [details] [associations]
symbol:Esf1 "ESF1, nucleolar pre-rRNA processing protein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR012580 Pfam:PF08159
RGD:1306067 GO:GO:0005654 GO:GO:0005730 GO:GO:0006355 GO:GO:0006351
CTD:51575 eggNOG:COG5638 HOGENOM:HOG000182523 HOVERGEN:HBG051149
GeneTree:ENSGT00390000004881 EMBL:AB038233 IPI:IPI00368799
RefSeq:NP_001094241.1 UniGene:Rn.22208 STRING:Q76MT4
PhosphoSite:Q76MT4 PRIDE:Q76MT4 Ensembl:ENSRNOT00000034487
GeneID:366203 KEGG:rno:366203 UCSC:RGD:1306067 InParanoid:Q76MT4
NextBio:688947 ArrayExpress:Q76MT4 Genevestigator:Q76MT4
GermOnline:ENSRNOG00000004777 Uniprot:Q76MT4
Length = 842
Score = 468 (169.8 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 112/300 (37%), Positives = 155/300 (51%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G + SV +YPSEFG QRMKEE+++
Sbjct: 333 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMKEEQIQ 392
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RL+YYYAVVECDS TA +Y CDG+E
Sbjct: 393 GPVELLSIPEDAPEKDWASRE---KLRDYQFKRLKYYYAVVECDSPETASKIYEDCDGLE 449
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+D A+E +FT A + S V+++WD+ + +
Sbjct: 450 FESSCSFIDLRFIPDDITFDDEPKDAASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHE 509
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXX--------NVAD----EXXXXXXXX 395
R+ TL RKF D++ +++ + +LA ++ D +
Sbjct: 510 RITTLNRKFKKDELLDMDFEAYLASSSEDEEEVEEAPEGEDGVSIEDGKTKKSQKDDEEQ 569
Query: 396 XXXYRALLXXXXXXXXXXXXXXQDMEVTFNTGL----EDISKRILEKKDKKSETIWEAYL 451
YR LL +ME+ + GL E++ K LE KDK T WE +L
Sbjct: 570 IAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKL--TPWEQFL 627
Score = 129 (50.5 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I+ D RF V DPRF +P++ KV ID RF MF DK F + A DKRG+P + T
Sbjct: 7 IMDDQRFRRVSKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYA-VDKRGRPISHSTT 65
Query: 85 SKSSLQHYY 93
L+ +Y
Sbjct: 66 E--DLKRFY 72
Score = 109 (43.4 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTNAQMPS 629
D RF A++TS LF LDP+DP FK++ + + +K + +Q+E+ + ++ + AQ +
Sbjct: 750 DARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARHREQKEERLIQAVE---RAQQDT 806
Query: 630 DDPDRHRHMKSDVSSL 645
P + + M +S L
Sbjct: 807 GKPAQKQPMDPALSML 822
>UNIPROTKB|E1BKI4 [details] [associations]
symbol:ESF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012580
Pfam:PF08159 GO:GO:0005634 CTD:51575 OMA:IKTKTEQ
GeneTree:ENSGT00390000004881 EMBL:DAAA02035139 EMBL:DAAA02035140
EMBL:DAAA02035141 IPI:IPI00698867 RefSeq:NP_001179701.1
UniGene:Bt.24361 PRIDE:E1BKI4 Ensembl:ENSBTAT00000009384
GeneID:533375 KEGG:bta:533375 NextBio:20876021 ArrayExpress:E1BKI4
Uniprot:E1BKI4
Length = 856
Score = 455 (165.2 bits), Expect = 6.6e-64, Sum P(3) = 6.6e-64
Identities = 111/300 (37%), Positives = 153/300 (51%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G I SV +YPSEFG +RMKEE V+
Sbjct: 345 PRADEITCRLAVCNMDWDRLKAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEHVQ 404
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RL+YYYAVV+CDS TA +Y CDG+E
Sbjct: 405 GPVELLSIPEDAPEKDWASRE---KLRDYQFKRLKYYYAVVDCDSPETAAKIYEDCDGLE 461
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+DVA+E +FT A + S V+++WD+ + +
Sbjct: 462 FESSCSFVDLRFIPDDITFDDEPKDVASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHE 521
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXXNVADEXXXXXXXXXXX--------- 398
R+ TL R+F +++ +++ + +LA D+
Sbjct: 522 RITTLNRRFKKEELLDMDFQAYLASSSEDEEEMEEAQGDDGVSVEEDGKTKKSQKDDEEQ 581
Query: 399 ---YRALLXXXXXXXXXXXXXXQDMEVTFNTGL----EDISKRILEKKDKKSETIWEAYL 451
YR LL +ME+ + GL E++ K LE KDK T WE +L
Sbjct: 582 IAKYRQLLQVIQDKEKKSKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKL--TPWEQFL 639
Score = 135 (52.6 bits), Expect = 6.6e-64, Sum P(3) = 6.6e-64
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I++D RF V DPRF +P++ KV ID RF MF DK F + A DKRG+P K+ T
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYA-VDKRGRPIKHSTT 65
Query: 85 SKSSLQHYY 93
L+ +Y
Sbjct: 66 E--DLKRFY 72
Score = 116 (45.9 bits), Expect = 6.6e-64, Sum P(3) = 6.6e-64
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIREST 619
D RF A++TS LF LDP+DP FK++ R + +K ++ +Q+EQ + ++T
Sbjct: 764 DARFQAMYTSHLFNLDPSDPNFKKTKAMERILEEKARQREQKEQGLTQAT 813
>UNIPROTKB|Q9H501 [details] [associations]
symbol:ESF1 "ESF1 homolog" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR012580 Pfam:PF08159
GO:GO:0005654 GO:GO:0005730 GO:GO:0006355 GO:GO:0006351
EMBL:AL161659 EMBL:AK000375 EMBL:AK022369 EMBL:AK022670
EMBL:BC046107 EMBL:AF068285 IPI:IPI00024167 RefSeq:NP_057733.2
UniGene:Hs.369284 ProteinModelPortal:Q9H501 IntAct:Q9H501
MINT:MINT-252787 STRING:Q9H501 PhosphoSite:Q9H501 DMDM:25452905
PaxDb:Q9H501 PeptideAtlas:Q9H501 PRIDE:Q9H501 DNASU:51575
Ensembl:ENST00000202816 GeneID:51575 KEGG:hsa:51575 UCSC:uc002woj.3
CTD:51575 GeneCards:GC20M013643 H-InvDB:HIX0015649 HGNC:HGNC:15898
HPA:HPA047083 neXtProt:NX_Q9H501 PharmGKB:PA162385420
eggNOG:COG5638 HOGENOM:HOG000182523 HOVERGEN:HBG051149
InParanoid:Q9H501 OMA:IKTKTEQ OrthoDB:EOG4MKNFT PhylomeDB:Q9H501
ChiTaRS:ESF1 GenomeRNAi:51575 NextBio:55409 ArrayExpress:Q9H501
Bgee:Q9H501 CleanEx:HS_ESF1 Genevestigator:Q9H501
GermOnline:ENSG00000089048 Uniprot:Q9H501
Length = 851
Score = 459 (166.6 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 112/301 (37%), Positives = 155/301 (51%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G I SV +YPSEFG +RMKEE+V+
Sbjct: 341 PRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQ 400
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RL+YYYAVV+CDS TA +Y CDG+E
Sbjct: 401 GPVELLSIPEDAPEKDWTSRE---KLRDYQFKRLKYYYAVVDCDSPETASKIYEDCDGLE 457
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+DVA+E +FT A + S V+++WD+ + +
Sbjct: 458 FESSCSFIDLRFIPDDITFDDEPKDVASEVNLTAYKPKYFTSAAMGTSTVEITWDETDHE 517
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXX--------NVADEXXXXXXXXX--- 396
R+ L RKF +++ +++ + +LA NV ++
Sbjct: 518 RITMLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDGVNVEEDGKTKKSQKDDEE 577
Query: 397 --XXYRALLXXXXXXXXXXXXXXQDMEVTFNTGL----EDISKRILEKKDKKSETIWEAY 450
YR LL +ME+ + GL E++ K LE KDK T WE +
Sbjct: 578 QIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKL--TPWEQF 635
Query: 451 L 451
L
Sbjct: 636 L 636
Score = 130 (50.8 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I++D RF V DPRF +P++ KV ID RF MF DK F + A DKRG+P + T
Sbjct: 7 IMSDQRFRRVAKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYA-VDKRGRPISHSTT 65
Query: 85 SKSSLQHYY 93
L+ +Y
Sbjct: 66 E--DLKRFY 72
Score = 114 (45.2 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 569 DDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTK-----IPT 623
+D RF A++TS LF LDP+DP FK++ + + +K ++ +++EQ + ++ K I
Sbjct: 758 NDARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQRERKEQELTQAIKKKESEIEK 817
Query: 624 NAQMPSDDPDRHRHMKS 640
+Q S DP +KS
Sbjct: 818 ESQRKSIDPALSMLIKS 834
Score = 42 (19.8 bits), Expect = 4.0e-56, Sum P(3) = 4.0e-56
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 584 LDPTDPQF----KRSAVYARQIAQKKQKGDQREQVIRESTKIPTNAQMPSDDPDRHRH 637
+D DP F K+ + + + K E++ E K M +D D +H
Sbjct: 665 VDLNDPYFAEEVKQIGINKKSVKSAKDGTSPEEEIEIERQKAEMALLMMDEDEDSKKH 722
Score = 40 (19.1 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 470 DDEASDTDREAIEEPD 485
DDE D D E E+ D
Sbjct: 274 DDEEEDEDEEEDEDED 289
>UNIPROTKB|E2REW3 [details] [associations]
symbol:ESF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR012580 Pfam:PF08159 GO:GO:0005634 CTD:51575 OMA:IKTKTEQ
GeneTree:ENSGT00390000004881 EMBL:AAEX03013785 RefSeq:XP_534341.2
Ensembl:ENSCAFT00000008999 GeneID:477151 KEGG:cfa:477151
Uniprot:E2REW3
Length = 849
Score = 461 (167.3 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 107/299 (35%), Positives = 156/299 (52%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
P D T RLA+ NMDW +KA DLL + +SF PK G I SV +YPSEFG +RMKEE+V+
Sbjct: 337 PRADEVTRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQ 396
Query: 229 GPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVE 288
GPV L KLR Y+ RLRYYYAVV+CDS TA +Y CDG+E
Sbjct: 397 GPVELLSIPEDAPEKDWTSRE---KLRDYQFKRLRYYYAVVDCDSPETAGKIYEDCDGLE 453
Query: 289 FERSSNKLDLRFIPDTMEFKYPPRDVATEAPANYGGLDFFTKA-LQHSNVQLSWDDDEPD 347
FE S + +DLRFIPD + F P+D+A+E +FT A + S V+++WD+ + +
Sbjct: 454 FESSCSFIDLRFIPDDITFDDEPKDIASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHE 513
Query: 348 RVKTLKRKFNADQVAELELKEFLAXXXXXXXXXXXNV-ADEXXXXXXXXXXX-------- 398
R+ TL RKF +++ +++ + +LA + D+
Sbjct: 514 RITTLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDKISIEEDGKTKKSQKDDEE 573
Query: 399 ----YRALLXXXXXXXXXXXXXXQDMEVTFNTGLEDISKRILEKK--DKKSETIWEAYL 451
YR LL +ME+ + GL++ ++ +++ K K + T WE +L
Sbjct: 574 QIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDNLTPWEQFL 632
Score = 121 (47.7 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
I++D RF V DPRF +P++ KV ID RF MF DK F + A DKRG+ N T
Sbjct: 7 IMSDQRFRRVTKDPRFWEMPEKDRKVKIDKRFRAMFHDKRFKLNYA-VDKRGR-LINHST 64
Query: 85 SKSSLQHYY 93
++ L+ +Y
Sbjct: 65 TED-LKRFY 72
Score = 116 (45.9 bits), Expect = 3.7e-63, Sum P(3) = 3.7e-63
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTK-----IPTN 624
D RF A++TS LF LDP+DP FK++ + + +K ++ +Q+EQ + ++ K I
Sbjct: 757 DARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQREQKEQELTQAIKKKESEIQKE 816
Query: 625 AQMPSDDPDRHRHMKS 640
+Q S DP +KS
Sbjct: 817 SQKRSIDPALSMLIKS 832
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 470 DDEASDTDREAIEEPD 485
+DE SD D E+ PD
Sbjct: 282 EDEDSDNDDESDSGPD 297
>FB|FBgn0024364 [details] [associations]
symbol:CG11417 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR012580 Pfam:PF08159 GO:GO:0005634
GO:GO:0022008 FlyBase:FBgn0024364 EMBL:AY122162 STRING:Q8MR29
PRIDE:Q8MR29 InParanoid:Q8MR29 ArrayExpress:Q8MR29 Bgee:Q8MR29
Uniprot:Q8MR29
Length = 785
Score = 421 (153.3 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 98/212 (46%), Positives = 125/212 (58%)
Query: 172 DNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVRGPV 231
+ T RLA+ NMDW ++A DL+V+LSSFLP G ILSV +YPSEFG RM EEEV GP
Sbjct: 235 EESTRRLAVCNMDWDRIRAEDLMVMLSSFLPPGGSILSVKIYPSEFGKARMAEEEVHGPK 294
Query: 232 GLF-------DS-----QXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADY 279
L DS + KLR Y+ +RLRYYYAVVECDS TAD
Sbjct: 295 ELVERVEPEDDSDEELVRQQDSDAEEGEDYHMEKLRQYQLNRLRYYYAVVECDSIDTADK 354
Query: 280 LYRACDGVEFERSSNKLDLRFIPDTMEFKYP-PRDVATEAP--ANYGGLDFFTKALQHSN 336
+Y+ CDG+E+E S+ ++DLRFIPD F+ P D E P ++Y F T ALQ +
Sbjct: 355 VYKECDGIEYESSATRVDLRFIPDDTSFEEDTPSDECFELPDASSYKPRQFTTTALQQAK 414
Query: 337 VQLSWDDDEPDRVKTLKRKFNADQVAELELKE 368
V L+WD+ DR + L K ++ QV +L KE
Sbjct: 415 VDLTWDETALDR-RELGDKLSSGQVDKLTDKE 445
Score = 127 (49.8 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 28 DSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTSKS 87
DSRF + +DPRF+ VPK + KV ID RF MFTD F DK G+P K++
Sbjct: 58 DSRFQHLLTDPRFRGVPKVQRKVKIDKRFQGMFTDDKFKVKYT-VDKYGRPVN--KSNAE 114
Query: 88 SLQHYY 93
L+ +Y
Sbjct: 115 DLRKFY 120
Score = 62 (26.9 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 569 DDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQK-KQKGDQRE 612
+D RFSA++ S + +DPT +K + + I +K K++ +Q E
Sbjct: 696 NDNRFSAVYKSHEYNIDPTHSHYKPTKGMQQIIGEKLKRRKEQGE 740
Score = 42 (19.8 bits), Expect = 6.4e-52, Sum P(3) = 6.4e-52
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 584 LDPTDPQFKRSAVYARQIAQKKQK---GDQRE--QVIRESTKIPTNAQMPSDD 631
LD D + ++ +I +K+++ G +R+ Q +++S P NA+ DD
Sbjct: 638 LDDGDGRDEKQHFSLTKILKKEEQEASGSKRKRRQKLKKSKNQPQNAEKLDDD 690
>CGD|CAL0000677 [details] [associations]
symbol:orf19.2319 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR012580
Pfam:PF08159 CGD:CAL0000677 GO:GO:0005634 EMBL:AACQ01000114
eggNOG:COG5638 RefSeq:XP_713924.1 STRING:Q59WI3 GeneID:3644427
KEGG:cal:CaO19.2319 Uniprot:Q59WI3
Length = 672
Score = 300 (110.7 bits), Expect = 2.8e-51, Sum P(4) = 2.8e-51
Identities = 73/201 (36%), Positives = 107/201 (53%)
Query: 254 LRAYEKSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRFIPDTMEFKYPP-R 312
LR Y+ RLRYYYAVV+CDS TA +Y+ CDG E+E ++N DLR++PD MEF +
Sbjct: 289 LRRYQLQRLRYYYAVVKCDSVETARSIYQNCDGTEYESTANIFDLRYVPDDMEFDDDEAK 348
Query: 313 DVATEAPANYG-GLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQVAELELKEFLA 371
D ++ P++Y F T ALQHS V+L+WD+ +R+ R + ++ E + K +LA
Sbjct: 349 DTCSKIPSSYRPDSTFVTDALQHSKVKLTWDETPKERLTLSSRPLSQKEIEENDFKAYLA 408
Query: 372 XXXXXXXXXX-XNVADEXXXXXXXXXXXYRALLXXXXXXXXXXXXXXQ-DMEVTFNTGLE 429
++ D+ Y++LL DME+TF+ GL
Sbjct: 409 SDSDESEVEKDSSIKDK-----------YQSLLGNTLTKFGKEENDDDVDMEITFDPGLN 457
Query: 430 DISKRILEKKDKKSETIWEAY 450
D S E++DK+ TI EAY
Sbjct: 458 DKSGNNAEEEDKEETTI-EAY 477
Score = 181 (68.8 bits), Expect = 2.8e-51, Sum P(4) = 2.8e-51
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 169 PEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEVR 228
PE T A+VNMDW +++AVDL+ SF+PK G I SV +YPSEFG +RM++EE+
Sbjct: 174 PEDTEPTCAFAVVNMDWDNIRAVDLMATFVSFVPKGGAIKSVTIYPSEFGKERMQKEEIE 233
Query: 229 GPVG-LFDSQ 237
GP LF S+
Sbjct: 234 GPPRELFKSK 243
Score = 99 (39.9 bits), Expect = 2.8e-51, Sum P(4) = 2.8e-51
Identities = 19/84 (22%), Positives = 43/84 (51%)
Query: 566 ADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTNA 625
A+ DDPRF +F S +A+DPT+ +FK++ + + ++ + ++ S N+
Sbjct: 586 ANLDDPRFKEVFESHDYAIDPTNSEFKKTETMKKILKERSARNKDKKNKKNSSKNATKNS 645
Query: 626 QMPSDDPDRHRHMKSDVSSLKREN 649
+ + + + ++ S +K+ N
Sbjct: 646 KRSRSELESNDNVHSLAEKIKKRN 669
Score = 93 (37.8 bits), Expect = 2.8e-51, Sum P(4) = 2.8e-51
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKS-KVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLK 83
I D RF SVH+DPRF+ +PK K+ +V +D RF + K A + K + + +K
Sbjct: 18 ITQDERFKSVHNDPRFK-MPKLKNLRVKVDDRFSKDELKKLNAGALGKKVKIDRYGRKIK 76
Query: 84 TSKSSLQHYY 93
L +Y
Sbjct: 77 KESDDLSKFY 86
Score = 46 (21.3 bits), Expect = 8.7e-46, Sum P(4) = 8.7e-46
Identities = 19/103 (18%), Positives = 47/103 (45%)
Query: 592 KRSAVYARQIAQKKQKGDQREQVIRESTKIPTNAQMPSDDPDRHRHMKSDVSSLKRENHE 651
KR A + ++ Q ++ + +E +S+K N++ PD K+++ + +N E
Sbjct: 487 KRLAKF-KESKQTEEVANSQEGSADKSSKNRKNSKKGKSMPDMDEKSKAELELILMDNQE 545
Query: 652 XXXXXXXXXXXXXQIQLPSEPKKDE-GVQ-SKEVEENNGLSNL 692
+ + + KK++ G + +E+ ++ ++NL
Sbjct: 546 GNNNEHFSMKEVIKSEKDKKNKKNKKGKKIDQEMVQDGFVANL 588
>SGD|S000002773 [details] [associations]
symbol:ESF1 "Nucleolar protein involved in pre-rRNA
processing" species:4932 "Saccharomyces cerevisiae" [GO:0003723
"RNA binding" evidence=IEA;IDA] [GO:0006364 "rRNA processing"
evidence=IEA;IMP;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012580 Pfam:PF08159
SGD:S000002773 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
EMBL:U28373 GO:GO:0006364 eggNOG:COG5638 HOGENOM:HOG000182523
GeneTree:ENSGT00390000004881 OrthoDB:EOG4CC79P PIR:S61160
RefSeq:NP_010653.1 ProteinModelPortal:Q06344 DIP:DIP-5248N
IntAct:Q06344 MINT:MINT-524194 STRING:Q06344 PaxDb:Q06344
PeptideAtlas:Q06344 EnsemblFungi:YDR365C GeneID:851969
KEGG:sce:YDR365C CYGD:YDR365c OMA:DMEITFT NextBio:970091
Genevestigator:Q06344 GermOnline:YDR365C Uniprot:Q06344
Length = 628
Score = 284 (105.0 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 66/193 (34%), Positives = 95/193 (49%)
Query: 254 LRAYEKSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRFIPDTMEFKYPPRD 313
LR Y+ RLRYYYA+V C + T+ +Y CDG E+E ++N DLR++PD M F RD
Sbjct: 249 LRQYQLDRLRYYYAIVYCSDTTTSKAIYDNCDGTEYESTANMFDLRYVPDGMTFDDDVRD 308
Query: 314 VATEAPANYGGLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQVAELELKEFLAXX 373
+ P NY F T ALQHS+V+L+WD+ DRV+ KR F ++ +++ K +LA
Sbjct: 309 ECSILPKNYRPHQFSTDALQHSSVKLTWDETPADRVEVAKRAFTQKEIDDMDFKAYLASD 368
Query: 374 XXXXXXXXXNVADEXXXXXXXXXXXYRALLXXXXXXXXXXXXXXQDMEVTFNTGLEDISK 433
V +E + DME+TF LE ++
Sbjct: 369 SDESDG---QVDEEAKNKLKSLVGDFG---FNSKKETPNDEDEEVDMEITFTPALEGGNE 422
Query: 434 RILEKKDKKSETI 446
+ E DK+ TI
Sbjct: 423 KSSE--DKEETTI 433
Score = 192 (72.6 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 167 AIPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEE 226
A PE + + LA+VN+DW HVK+ DL++ SSF+PK G+I VA+YPSEFG +RM+ EE
Sbjct: 138 AKPESGDISKNLAVVNLDWDHVKSEDLMITFSSFVPKGGKIERVAIYPSEFGKERMQREE 197
Query: 227 VRGP 230
V GP
Sbjct: 198 VEGP 201
Score = 99 (39.9 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 28 DSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTSK 86
D+RFA ++SDP+F+N + K+ +DSRF + + S DK G+ KN + ++
Sbjct: 12 DARFAGIYSDPKFKNTKTKDHKIKLDSRFSKKDLEVQHKSKV---DKYGRKIKNAQNNR 67
Score = 97 (39.2 bits), Expect = 7.1e-51, Sum P(4) = 7.1e-51
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 560 EDKIPTADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIREST 619
ED T D +DPRF +F FA+DPT P+FK + ++ + ++ ++ +++ + S
Sbjct: 538 EDTF-TPDLEDPRFKEVFEDHDFAIDPTQPEFKGTQAMSKILKERSKRVKNKKRKLGGSE 596
Query: 620 KIPTNAQMPSDD 631
TN ++D
Sbjct: 597 NNMTNNADDNED 608
Score = 43 (20.2 bits), Expect = 4.5e-45, Sum P(4) = 4.5e-45
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 49 KVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTSKSSLQ 90
K +D+RF +++D F ++ K K K + + SK L+
Sbjct: 8 KEGVDARFAGIYSDPKFKNTKT---KDHKIKLDSRFSKKDLE 46
Score = 42 (19.8 bits), Expect = 7.3e-24, Sum P(4) = 7.3e-24
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 328 FTKALQHSNVQLSWDDDEPDRVKTLKRK 355
FT AL+ N + S +D E ++ ++RK
Sbjct: 413 FTPALEGGNEKSS-EDKEETTIEKIRRK 439
>ASPGD|ASPL0000065711 [details] [associations]
symbol:AN7503 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR012580 Pfam:PF08159 GO:GO:0005634
EMBL:AACD01000129 EMBL:BN001304 eggNOG:COG5638 HOGENOM:HOG000182523
OMA:IKTKTEQ OrthoDB:EOG4CC79P RefSeq:XP_680772.1 STRING:Q5AW27
EnsemblFungi:CADANIAT00000602 GeneID:2869352 KEGG:ani:AN7503.2
Uniprot:Q5AW27
Length = 723
Score = 248 (92.4 bits), Expect = 1.7e-46, Sum P(4) = 1.7e-46
Identities = 72/239 (30%), Positives = 101/239 (42%)
Query: 253 KLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRFIPDTMEFKYP-P 311
+LR Y+ RLRYYYA++ S A ++Y DG E+ S+N DLRF+PD +F P
Sbjct: 284 QLRKYQLERLRYYYAILTFSSKEVAKHVYDNVDGAEYLSSANFFDLRFVPDDTDFSDDQP 343
Query: 312 RDVATEAPANYGGLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQ--VAELELKEF 369
RD P Y +F T ALQHS V+L+WD D+ R + R F + + E +LK +
Sbjct: 344 RDECERIPDGYQPNEFVTDALQHSKVKLTWDADDKSRKEAQARAFRGSRKDIDENDLKAY 403
Query: 370 LAXXXXXXXXXXX-NVAD------EXXXXXXXXXXXYRALLXXXXXXXXXXXXXXQ--DM 420
LA ++ D RALL +M
Sbjct: 404 LASDSSDDEEEGGVDIIDGIKGEGSKTSQKEEERKRMRALLGLSEEPASASKSDGPVGEM 463
Query: 421 EVTFNTGLEDISKRILEKKDKKSETIWEAYLXXXXXXXXXXXXXXXXXXDDEASDTDRE 479
EVTF +GL R +++ ET E YL D+A+D D +
Sbjct: 464 EVTFTSGLAGEPDRDTVFENEPEETTIEKYLRKERERKKRRKEKIKGNKGDDAADDDNK 522
Score = 178 (67.7 bits), Expect = 1.7e-46, Sum P(4) = 1.7e-46
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 168 IPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEV 227
+P + T+R+A+VN+DW +++A DL+ + SSF P G++ VAVYPSEFG +RM+ EE
Sbjct: 174 VP-VGEVTNRIAVVNLDWDNIRAEDLMAVFSSFTPTGGKVTKVAVYPSEFGKERMEREET 232
Query: 228 RGP 230
GP
Sbjct: 233 EGP 235
Score = 118 (46.6 bits), Expect = 1.7e-46, Sum P(4) = 1.7e-46
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
+ITD RFA++ +DPR++ K+ + V +D RF + DK F S A D+ G+ K
Sbjct: 20 VITDPRFANIQTDPRYRLPSKRHTHVKLDKRFAHILHDKEF-SRNAAVDRYGR-KLARDD 77
Query: 85 SKSSLQHYYR 94
+K L+ +YR
Sbjct: 78 TKKHLERFYR 87
Score = 100 (40.3 bits), Expect = 1.7e-46, Sum P(4) = 1.7e-46
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 557 VPDEDKIPTADYDDPRFSALFTSPLFALDPTDPQFK-RSAVYA-----RQIAQKKQKGDQ 610
VPD ++ D DPRFS LF + FA+DPT+P+FK S + A R+ + + +G
Sbjct: 626 VPDNFEM---DVGDPRFSRLFQNHEFAIDPTNPRFKPTSGMKALLEEGRKRRRDRDEGGD 682
Query: 611 REQVIRESTKIPTNAQMPSDDPDRHRHMKSDVSSLKRE 648
E R K ++ + D +K V +KR+
Sbjct: 683 EEDESRNGKKQKQRSKKSASAEDGTDDLKKLVEKVKRK 720
Score = 51 (23.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/95 (21%), Positives = 41/95 (43%)
Query: 556 EVPDEDKIPTADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVI 615
EV + + D+D+ R L + + PT + + AVY + +++ + ++ E
Sbjct: 178 EVTNRIAVVNLDWDNIRAEDLM-AVFSSFTPTGGKVTKVAVYPSEFGKERMEREETEGPP 236
Query: 616 RESTKIPTNAQMPSDDP-DRHRHMKSDVSSLKREN 649
RE T ++ D+ D + S+ K +N
Sbjct: 237 REI--FATQDEVNDDEEEDEDEELDSEEEEEKIKN 269
Score = 48 (22.0 bits), Expect = 4.0e-41, Sum P(4) = 4.0e-41
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 599 RQIAQKKQKGDQREQVIRESTKIPTNAQMPSDDP 632
+Q +KK KG Q+ E+ +P N +M DP
Sbjct: 608 KQARKKKGKGKQKG----EAAPVPDNFEMDVGDP 637
>DICTYBASE|DDB_G0269312 [details] [associations]
symbol:DDB_G0269312 "unknown" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR012580 Pfam:PF08159
dictyBase:DDB_G0269312 GO:GO:0005634 EMBL:AAFI02000005
GO:GO:0006364 eggNOG:COG5638 OMA:DMEITFT RefSeq:XP_645863.1
STRING:Q55EB8 EnsemblProtists:DDB0304439 GeneID:8616806
KEGG:ddi:DDB_G0269312 InParanoid:Q55EB8 ProtClustDB:CLSZ2846913
Uniprot:Q55EB8
Length = 836
Score = 272 (100.8 bits), Expect = 5.3e-45, Sum P(5) = 5.3e-45
Identities = 58/122 (47%), Positives = 76/122 (62%)
Query: 253 KLRAYEKSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRFIPDTMEFKYPPR 312
KLR YE S+LRYYYAVVEC S TA+ +Y C+G+E E ++N LDLRFIPD +F PR
Sbjct: 283 KLRQYELSKLRYYYAVVECSSIQTANKIYEECEGMEIEDTANVLDLRFIPDDQKFTNTPR 342
Query: 313 DVATEAPANY---GGLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQVAELELKEF 369
D TE PA+ GG F T L+ + V +WD D+ R K L + F+ E +L+ +
Sbjct: 343 DTCTELPASTDENGGFGFQTSILKGTAVDFTWDIDKT-RKKLLTKNFSKFDAREEDLRAY 401
Query: 370 LA 371
LA
Sbjct: 402 LA 403
Score = 130 (50.8 bits), Expect = 5.3e-45, Sum P(5) = 5.3e-45
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 168 IPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDG--QILSVAVYPSEFGIQRMKEE 225
+P D T R A++N DW ++ + L ++L+SF+P G I + +YPS+FG+++M E
Sbjct: 175 VPRGD-ATKRFAVLNCDWDNITSKQLFILLNSFVPSSGGGHIERITIYPSDFGLEQMARE 233
Query: 226 EVRGP 230
+ GP
Sbjct: 234 KSLGP 238
Score = 105 (42.0 bits), Expect = 5.3e-45, Sum P(5) = 5.3e-45
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 26 ITDSRFASVHSDPRFQNVPKQKSKVAIDSRF-DRMFTDKNFASSTAPFDKRGKPKKNLKT 84
ITD+RF +DP+F+ ++ V +D+RF D M ++ +F S AP D+ G+ N K
Sbjct: 19 ITDNRFKHAQNDPKFKMYRRKDKAVQLDNRFGDLMKSNSSFTSD-APIDEYGRKIVNKKI 77
Query: 85 SKSSLQHY 92
KS + Y
Sbjct: 78 DKSIKKTY 85
Score = 99 (39.9 bits), Expect = 5.3e-45, Sum P(5) = 5.3e-45
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKK-----QKGDQREQVIRESTKI 621
D RF ++F P +A+DPTDP+FKR+ + +KK +K + ++++ K+
Sbjct: 732 DNRFHSMFIDPAYAIDPTDPKFKRTTGMVEMLTEKKNRRKVEKEKEEKEILERRNKL 788
Score = 57 (25.1 bits), Expect = 5.3e-45, Sum P(5) = 5.3e-45
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 421 EVTFNTGLEDISKRILEKKDKKSE-TIWEAYL 451
E+ NT L ++ K++L++K+K+ ++ YL
Sbjct: 581 EMVINTNLNNVGKKLLKEKEKRENGNVFTDYL 612
Score = 39 (18.8 bits), Expect = 1.3e-18, Sum P(5) = 1.3e-18
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 342 DDDEPDRVKTLKRKFNADQVAEL 364
D + PD K LK D V E+
Sbjct: 560 DSETPDWAKDLKSDSEDDTVQEM 582
Score = 38 (18.4 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 313 DVATEAPANYGGLDFFTKALQHSNVQLSWDDDEPD 347
D+ +E YGG ++ + + DD E +
Sbjct: 134 DIESEKVIEYGGFEYNSDTESSDAEEFQGDDIEEE 168
>POMBASE|SPBC1734.01c [details] [associations]
symbol:esf1 "pre-rRNA processing protein Esf1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR012580 Pfam:PF08159
PomBase:SPBC1734.01c GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006364
eggNOG:COG5638 HOGENOM:HOG000182523 OMA:IKTKTEQ PIR:T40270
RefSeq:NP_595418.1 STRING:O74828 EnsemblFungi:SPBC1734.01c.1
GeneID:2540076 KEGG:spo:SPBC1734.01c OrthoDB:EOG4CC79P
NextBio:20801213 Uniprot:O74828
Length = 682
Score = 316 (116.3 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 81/253 (32%), Positives = 114/253 (45%)
Query: 200 FLPKDGQILSVAVYPSE-FGIQRMKEEEVRGPVGLFDSQXXXXXXXXXXXXXXXKLRAYE 258
F P D Q S ++ ++ FG + ++ D + KLR Y+
Sbjct: 239 FTPADNQPSSAELHEAQKFGFDNNESDQ--------DEEDALIEEDLGNEFDMVKLRQYQ 290
Query: 259 KSRLRYYYAVVECDSSATADYLYRACDGVEFERSSNKLDLRFIPDTMEFKYPP-RDVATE 317
RLRYYYAVVECDS TA +Y CDG E+E S+N DLRFIPD + F R+V T+
Sbjct: 291 LERLRYYYAVVECDSVRTAKVIYETCDGAEYETSANIYDLRFIPDDVTFDDDESREVCTK 350
Query: 318 APANYGGLDFFTKALQHSNVQLSWDDDEPDRVKTLKRKFNADQVAELELKEFLAXXXXXX 377
AP Y DF T ALQHS V+LSWD ++P R +K+ F + + +L+ ++A
Sbjct: 351 APEKYEPRDFVTDALQHSKVKLSWDAEDPHRKDLIKKAFTSQDIEDLDFSAYIASSESED 410
Query: 378 XXXXXNVADEXXXXXXXXXXXYRALLXXXXXXXXXXXXXXQDMEVTFNTGLEDISKRILE 437
+ ++A +MEVTF +G D+
Sbjct: 411 EDVDV-IRSRYQKLLSGDADDFQAN-SNPFEDDDKLEGANGEMEVTFTSGF-DVDNNA-- 465
Query: 438 KKDKKSETIWEAY 450
+K ET E Y
Sbjct: 466 NSSEKDETTIEKY 478
Score = 189 (71.6 bits), Expect = 1.0e-28, Sum P(3) = 1.0e-28
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 168 IPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEV 227
IP +ET+RLA+VNMDW +++AVDL V LSSF P G++L V++YPSEFG RM E V
Sbjct: 173 IPR-GSETNRLAVVNMDWDNLQAVDLFVALSSFCPPGGKLLKVSIYPSEFGKSRMAAEHV 231
Query: 228 RGP 230
+GP
Sbjct: 232 QGP 234
Score = 130 (50.8 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 25 IITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKT 84
++ D RF SVHSDPRF + + KV +D RF + DK+F +TA D+ G+P K
Sbjct: 19 VVADPRFQSVHSDPRFSRLKRGNFKVKVDERFKSLKEDKDF-KTTASVDRYGRPLNQDKA 77
Query: 85 SK 86
+K
Sbjct: 78 TK 79
Score = 123 (48.4 bits), Expect = 1.9e-44, Sum P(3) = 1.9e-44
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 566 ADYDDPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQ-KKQKGDQREQVIRESTKIPTN 624
AD DPRF+AL+T+ FALDPT+P FKR+ + + + +K++ +Q EQ ++
Sbjct: 598 ADVSDPRFAALYTNHNFALDPTNPHFKRTKTVEKIMDESRKRRSNQLEQTQDGKPELKIK 657
Query: 625 AQMPSDDPDRHRHMKSDVSSLKR 647
+ ++ D+ + + V S+KR
Sbjct: 658 KRK-AEKGDQRQELDRIVKSIKR 679
Score = 50 (22.7 bits), Expect = 4.1e-36, Sum P(3) = 4.1e-36
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 32 ASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTSKSSLQH 91
++V +DPRFQ+V D RF R+ NF K K K+ KT+ +S+
Sbjct: 17 SNVVADPRFQSVHS-------DPRFSRLKRG-NFKVKVDERFKSLKEDKDFKTT-ASVDR 67
Query: 92 YYR 94
Y R
Sbjct: 68 YGR 70
Score = 40 (19.1 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 25/132 (18%), Positives = 55/132 (41%)
Query: 559 DEDKIPTADYDDPRFSALFTSPLFALDPTDPQFKRSAV----YARQIAQKKQKGDQREQV 614
D+DK+ A+ + FTS F +D ++ Y R+ A++KQ+ + Q+
Sbjct: 440 DDDKLEGANGE---MEVTFTSG-FDVDNNANSSEKDETTIEKYKRKAAERKQRRKELRQL 495
Query: 615 --IRESTKIPTNAQMPSDDPDRHRHMKSDVSSLKRENHEXXXXXXXXXXXXXQIQLPSEP 672
++ ++ + DDP D S ++N + + +L +
Sbjct: 496 KKTKDDEGEGSDVDLGFDDPF---FKDKDASRNNKKNKKGKHTQIEDPTAASKEELENLV 552
Query: 673 KKDEGVQSKEVE 684
++DE S++++
Sbjct: 553 REDEN-DSEQLD 563
>WB|WBGene00010231 [details] [associations]
symbol:F58B3.4 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR012580
Pfam:PF08159 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 eggNOG:COG5638
GeneTree:ENSGT00390000004881 EMBL:Z73427 RefSeq:NP_502195.3
STRING:Q20969 PaxDb:Q20969 EnsemblMetazoa:F58B3.4 GeneID:178088
KEGG:cel:CELE_F58B3.4 UCSC:F58B3.4 CTD:178088 WormBase:F58B3.4
HOGENOM:HOG000017946 InParanoid:Q20969 OMA:DWEGEEK NextBio:899662
Uniprot:Q20969
Length = 601
Score = 294 (108.6 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 60/203 (29%), Positives = 108/203 (53%)
Query: 168 IPEIDNETHRLAIVNMDWRHVKAVDLLVILSSFLPKDGQILSVAVYPSEFGIQRMKEEEV 227
+ +++ ++RLA+ N++W + D+L+++ SF+P+ G ++SV +Y S+FG ++ +EE
Sbjct: 198 VDQVEWTSNRLAVCNLEWDTMNCEDILMLVKSFVPQGGSVISVGIYLSDFGKGQLSKEEK 257
Query: 228 RGPVGLFDSQXXXXXXXXXXXXXXXKLRAYEKSRLRYYYAVVECDSSATADYLYRACDGV 287
GP+ +R Y ++L+YYY+V+ DS +A +Y CDG
Sbjct: 258 TGPLLKLAKPVEEYKEDEMDDETRTAVREYLVNKLKYYYSVITFDSIPSAVAVYEECDGF 317
Query: 288 EFERSSNKLDLRFIPDTMEFKYPP-RDVATEAPAN---YGGLDFFTKALQHSNVQLSWDD 343
+FE + K+D+RFIPD M+F+ ++ N Y A+ + ++ WD+
Sbjct: 318 QFEETGLKMDMRFIPDDMDFEEDRVKEFLNAEDVNLTKYKAKKKSKSAIISTGAKILWDE 377
Query: 344 DEPDRVKTLKRKFNADQVAELEL 366
D+P R K FN D+ A +L
Sbjct: 378 DDPQRKKKFLEAFNGDEDAGKDL 400
Score = 107 (42.7 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 26 ITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAPFDKRGKPKKNLKTS 85
+ D RF+ + S+P F + + KV ID RF TD+ F S+ A D RG+ +K KT
Sbjct: 13 LNDERFSQIKSNPMFVGLKNSEKKVVIDKRFAAALTDERF-STRAKVDMRGRKQK--KTV 69
Query: 86 KSSLQHYY 93
+S+ Y
Sbjct: 70 GNSMLDLY 77
Score = 91 (37.1 bits), Expect = 3.9e-36, Sum P(3) = 3.9e-36
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTN-AQMP 628
D RFSALFT +A++P+ +FK S + +Q A++K KG VI TK P + Q
Sbjct: 532 DDRFSALFTDSAYAIEPSSKKFKGSLLVTKQ-AEQKSKGSST--VIE--TKKPEDLVQKL 586
Query: 629 SDDPDRHRHMKS 640
D+ KS
Sbjct: 587 KKQADKWNKKKS 598
Score = 49 (22.3 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 25 IITDSRFASVHSDPRFQNVPK-----QKSKVAI-DSRFDRMFTDKNFASSTAPFDKRGKP 78
++ D RFA+ +D RF K +K K + +S D +++ P K
Sbjct: 37 VVIDKRFAAALTDERFSTRAKVDMRGRKQKKTVGNSMLDLYELEED--EEVQPLKKEKIS 94
Query: 79 KKNLKTSKSSLQHYY 93
KK K L ++
Sbjct: 95 KKTTKDEDDELDDFF 109
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 342 DDDEPDRVKTLKRKFNADQVAELE 365
DDDE VK K+K + D E E
Sbjct: 454 DDDEEIGVKQKKKKGSDDDEDEKE 477
Score = 39 (18.8 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 471 DEASDTDREAIEEPDD 486
DE D D +A+E+ DD
Sbjct: 110 DEKDD-DEDALEDADD 124
>UNIPROTKB|H9L000 [details] [associations]
symbol:H9L000 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR012580 Pfam:PF08159 GO:GO:0005634
GeneTree:ENSGT00390000004881 EMBL:AADN02059221
Ensembl:ENSGALT00000021687 OMA:NVADTRF Uniprot:H9L000
Length = 144
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 570 DPRFSALFTSPLFALDPTDPQFKRSAVYARQIAQKKQKGDQREQVIRESTKIPTN 624
D RF A+FTSPLF +DP+DP FK++ R + +K ++ +Q++Q + E++K N
Sbjct: 52 DTRFQAMFTSPLFNVDPSDPNFKKTKAVERILEEKARRREQKQQDLHEASKEQEN 106
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 704 481 0.00080 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 611 (65 KB)
Total size of DFA: 270 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.77u 0.41s 35.18t Elapsed: 00:00:02
Total cpu time: 34.78u 0.41s 35.19t Elapsed: 00:00:02
Start: Tue May 21 07:19:52 2013 End: Tue May 21 07:19:54 2013