BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005277
(704 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/680 (36%), Positives = 360/680 (52%), Gaps = 91/680 (13%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 190 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 248
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 249 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 308
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 309 ISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 365
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL KE EI+ E G+ K
Sbjct: 366 EANKSKVFFGLL------------------------KEPEIEVPLDDEDEEGENEEGKPK 401
Query: 281 LKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRN------RVHL 334
KK K + +K+ + + P P +P +P + L+ + N RV L
Sbjct: 402 KKKPKKDSIGSKSKKQD-------PNAPPQNRIP-LPELKDSDKLDKIMNMKETTKRVRL 453
Query: 335 SSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMA----KLGQQAVSS 390
LPS+ FYTF+N + GL ++ D SL+AGGF+DS+++VW + + +QA
Sbjct: 454 GPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDL 513
Query: 391 GLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWST 450
L + E I+ LY GHSGPVY ASFSP +++LSSS D T+RLWS
Sbjct: 514 SLIDKESDDVLERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Query: 451 KLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 510
+ LV YKGHNYPVWD QF+P G+YF S HDR AR+W+ D QPLRI AGHL+DV+C
Sbjct: 573 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 632
Query: 511 VRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH+ I SL SP+GR++A+G DG
Sbjct: 633 TRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 571 IMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGC 630
+++WD+ G V L GHT V +L RF
Sbjct: 693 VLLWDIGHGLMVGELKGHTDTVCSL--RF------------------------------- 719
Query: 631 ASCEGSLLASGSADCTVKLWDVTTSTKVLKTEE-KSGTNRLR--------SLKTLPTKST 681
S +G +LASGS D TV+LWD + + L+T++ + T + L T TKST
Sbjct: 720 -SRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKST 778
Query: 682 PVYSLQFSRRNLLFAAGALS 701
PV L F+RRNL+ AAGA S
Sbjct: 779 PVVHLHFTRRNLVLAAGAYS 798
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/681 (36%), Positives = 361/681 (53%), Gaps = 93/681 (13%)
Query: 42 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCF 101
+ + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +
Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMY 249
Query: 102 MDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIK 161
++LV H EA++FF F D E + DL+ L + H++ E R SK ++
Sbjct: 250 LELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLR 309
Query: 162 ICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAAN 220
I + SY+LL ++L + Q+ ++ I+ E + + G P S DA + +L G +A
Sbjct: 310 IYRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAG---EAKR 366
Query: 221 QINQKEVHWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKK 280
+ N+ +V +GLL KE EI+ E G+ K
Sbjct: 367 EANKSKVFFGLL------------------------KEPEIEVPLDDEDEEGENEEGKPK 402
Query: 281 LKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRN------RVHL 334
KK K + +K+ + + P P +P +P + L+ + N RV L
Sbjct: 403 KKKPKKDSIGSKSKKQD-------PNAPPQNRIP-LPELKDSDKLDKIMNMKETTKRVRL 454
Query: 335 SSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG--- 391
LPS+ FYTF+N + GL ++ D SL+AGGF+DS+++VW + ++V
Sbjct: 455 GPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDL 514
Query: 392 --LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
+ E+D E I+ LY GHSGPVY ASFSP +++LSSS D T+RLWS
Sbjct: 515 SLIDKESDDV-LERIMDEKTASELKILY-GHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 572
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ LV YKGHNYPVWD QF+P G+YF S HDR AR+W+ D QPLRI AGHL+DV+
Sbjct: 573 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVN 632
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
C R+H N NY+ATGS+D+TVRLWDV +G CVRIF GH+ I SL SP+GR++A+G DG
Sbjct: 633 CTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG 692
Query: 570 TIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFG 629
+++WD+ G V L GHT V +L RF
Sbjct: 693 RVLLWDIGHGLMVGELKGHTDTVCSL--RF------------------------------ 720
Query: 630 CASCEGSLLASGSADCTVKLWDVTTSTKVLKTEE-KSGTNRLR--------SLKTLPTKS 680
S +G +LASGS D TV+LWD + + L+T++ + T + L T TKS
Sbjct: 721 --SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKS 778
Query: 681 TPVYSLQFSRRNLLFAAGALS 701
TPV L F+RRNL+ AAGA S
Sbjct: 779 TPVVHLHFTRRNLVLAAGAYS 799
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/724 (32%), Positives = 366/724 (50%), Gaps = 135/724 (18%)
Query: 9 FVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQ 68
V YL KKG+S E L+ E + S + + ++ E+ D Y
Sbjct: 15 IVLDYLAKKGYSRTEAMLRLEASGSGVS-------------VEEKLKSIEETPDA---YT 58
Query: 69 DEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMH 128
Y+ LR W SSL+LYK EL +L+P+F+H +++L+++ H + A+ F+ F++DH +H
Sbjct: 59 HTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELFKDDHTDLH 118
Query: 129 LRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---TKMLGI 185
D++ L+ + PSH+ E A R +K + + +++LLL +L + S + ++ +
Sbjct: 119 DFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSNGGSIIIKL 178
Query: 186 INERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLEN------- 238
IN+ I+ + PG+P+ + + A IN++E G+ S E
Sbjct: 179 INQHIDIHIVPGRPTVLEN--------------AKVINEQE---GITGQSFERGDAQLQP 221
Query: 239 -RLEKTGLISDSEKA-----EGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAK 292
+L++ + + EK E E+ + D N + P +K+ +K NA
Sbjct: 222 VKLQQMPMDKEMEKIVEMDLEEEDMMHQNDPNNQSP-------KLLKEFRKLHEPNAEDA 274
Query: 293 TSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSS-AALPSVSFYTFINTH 351
SR + + P D+ +EVE ++D R+HL A+LPSV YTF +T+
Sbjct: 275 PSR---DYIPLPPHKGVDIL-----SEVEA--VKDWSKRLHLGPRASLPSVCMYTFHHTN 324
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK 411
N +NCA S D +++A GF +S +++W + K ++++ E+ +G
Sbjct: 325 NNMNCAEFSPDSTMIACGFQESYIRLWSI-KADKKSLPKSTSVEDS----------DGSV 373
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R + HSGPVY +FSP ++LS S D + RLWS LV YKGH PVWDV F
Sbjct: 374 RLLS----HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAF 429
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
P GHYFA++SHD+TA++WS D I PLR+ AGHLSDVDCV +H N Y+ TGSSDKT RL
Sbjct: 430 GPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRL 489
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WDV G VR+F GH + ++A++PDG MAS D +G I +WD+ +GR + + GH
Sbjct: 490 WDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGN 549
Query: 592 VWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWD 651
+++L++ S E ++L SG +DCTV+ WD
Sbjct: 550 IYSLSF----------------------------------SRESTVLVSGGSDCTVRAWD 575
Query: 652 V------------TTSTKVLKTEEKSGTNRLRSLKTLP-------TKSTPVYSLQFSRRN 692
V T + V K+ T + T P TK TP++++ F+RRN
Sbjct: 576 VFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNWSTSPDQMVALYTKQTPIFNVSFTRRN 635
Query: 693 LLFA 696
L A
Sbjct: 636 LCLA 639
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 244/787 (31%), Positives = 377/787 (47%), Gaps = 148/787 (18%)
Query: 9 FVATYLKKKGFSEAENALQAEIQRNKSSNN-----------------------------T 39
V YL KKG+ E L+AE R + N +
Sbjct: 63 IVLEYLNKKGYHRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKPIS 122
Query: 40 NPIDILN--DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVF 97
NP ++ + D E E + P Y YS L++W SSL++YK EL +++YP+F
Sbjct: 123 NPTNLSSKRDAEGGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIF 182
Query: 98 IHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSK 157
I+ F++LVAK + AR FF+ F D + H ++ +L V S H++E E A + + K
Sbjct: 183 IYLFLNLVAKNPVY-ARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHK 241
Query: 158 VNIKICQYSYELLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQD 217
I + + + LLL +L++ +S II+ IN + P S++ ++ I D
Sbjct: 242 YRITMSKTTLNLLLYFLNENESIGGSLIIS-VINQHLDPNIVESVTAREKLADGIKVLSD 300
Query: 218 AAN-------QINQKEVHWGLL--EDSLENRLEKTGLISDSEKAE-----------GENK 257
+ N ++N V G ++ +E I D ++ + G N
Sbjct: 301 SENGNGKQNLEMNSVPVKLGPFPKDEEFVKEIETELKIKDDQEKQLNQQTAGDNYSGANN 360
Query: 258 EAEIDENKKRPVEGGKQGASI--------------KKLKKDKAINATAKTSRLEANTVST 303
+ E K E K +K + + ++ K S L +
Sbjct: 361 RTLLQEYKAMNNEKFKDNTGDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDI 420
Query: 304 APRVKPDLALPVMPTEVEQSILEDLRNRVHLSSA--ALPSVSFYTFINTHNGLNCASISQ 361
P + P AL + ++E +++ R+ + L + ALPSV YTF NT+ ++C S
Sbjct: 421 LP-LPPKTALDL---KLEIQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSD 476
Query: 362 DGSLVAGGFSDSSLKVW--DMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQG 419
D + A GF DS +K+W D + L ++ +++ + ++G
Sbjct: 477 DCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVG------------- 523
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HSG VYS SFSP ++LS S D T+RLWS + LV YKGHN+PVWDV F+P GHYFA
Sbjct: 524 HSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFA 583
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
++SHD+TAR+WS D I PLRI AGHL+DVDCV +H N Y+ TGSSDKT R+WDVS+G+
Sbjct: 584 TASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDS 643
Query: 540 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH-TSCVWTLAYR 598
VR+F+GH + ++S+A+ PDGR++++G EDG I +WD+ +G+ + + GH + +++L+Y
Sbjct: 644 VRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSY- 702
Query: 599 FLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKV 658
S EG++L SG AD TV++WD+ +T
Sbjct: 703 ---------------------------------SKEGNVLISGGADHTVRVWDLKKATTE 729
Query: 659 LKTEEKSG------------------TNRLRS-------LKTLPTKSTPVYSLQFSRRNL 693
E R R+ + + TK TPV+ ++FSR NL
Sbjct: 730 PSAEPDEPFIGYLGDVTASINQDIKEYGRRRTVIPTSDLVASFYTKKTPVFKVKFSRSNL 789
Query: 694 LFAAGAL 700
A GA
Sbjct: 790 ALAGGAF 796
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 213/664 (32%), Positives = 336/664 (50%), Gaps = 78/664 (11%)
Query: 49 ELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKG 108
EL+KF +S D Y+ Y +LR++ SLD+YKHEL VLYP+ + + ++A G
Sbjct: 101 ELAKFID--DDSFDAQ-HYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASG 157
Query: 109 HIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYE 168
++A+ F ++ D + ++ L L + P L E + ++ K I++ + S+
Sbjct: 158 LREKAKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHS 217
Query: 169 LLLQYLHKTQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSN-QDAANQINQKEV 227
L +++ + + I+++ ++F G + + V GS+ +A Q N+ V
Sbjct: 218 LFKRHIQDRRQEVVADIVSKYLHFDTYEGMAR---NKLQCVATAGSHLGEAKRQDNKMRV 274
Query: 228 HWGLLEDSLENRLEKTGLISDSEKAEGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAI 287
++ GL+ E + + + K KK K
Sbjct: 275 YY--------------GLLK-----EVDFQTLTTPAPAPEEEDDDPDAPDRPKKKKPKKD 315
Query: 288 NATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLR---NRVHLSSAALPSVSF 344
+K S+ + N AP + + LP + + L+ LR R+ LS LPS F
Sbjct: 316 PLLSKKSKSDPN----APSIDR-IPLPELKDSDKLLKLKALREASKRLALSKDQLPSAVF 370
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQAVSSGLQGENDTTPRE 402
YT +N+H G+ CA IS D +++A GF DSS+++W + AKL + L+ + +
Sbjct: 371 YTVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADI 430
Query: 403 DIIGPNGRKRSYTL-YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG 461
++ + R T GH+GPVY +F+P + +LS S D+TIRLWS + +V Y+G
Sbjct: 431 NVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRG 490
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIA 521
H YPVWDV+F P G+YF S S+D+TAR+W+ D Q LR+ GHLSDVDCV++H N NY+A
Sbjct: 491 HVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVA 550
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
TGSSD+TVRLWD +G+ VR+ GH+ + SLA S GRY+ASG D I++WDL++G
Sbjct: 551 TGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSL 610
Query: 582 VTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASG 641
VT L+ HTS V T+ + S +G++LA+
Sbjct: 611 VTTLLRHTSTVTTITF----------------------------------SRDGTVLAAA 636
Query: 642 SADCTVKLWDVTTSTK-------VLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLL 694
D + LWD T+ + + + ++T P+K++P SL F+RRNLL
Sbjct: 637 GLDNNLTLWDFHKVTEDYISNHITVSHHQDENDEDVYLMRTFPSKNSPFVSLHFTRRNLL 696
Query: 695 FAAG 698
G
Sbjct: 697 MCVG 700
>sp|O74319|TAF73_SCHPO Transcription initiation factor TFIID subunit taf73
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf73 PE=1 SV=1
Length = 642
Score = 322 bits (824), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 224/700 (32%), Positives = 345/700 (49%), Gaps = 89/700 (12%)
Query: 8 EFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARY 67
+ V YL KKG+S E L+ EI SS P E + SE+ Y
Sbjct: 17 KIVLDYLFKKGYSRTEAMLRLEI----SSVGAIP------EEQQDWHIGASET------Y 60
Query: 68 QDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMM 127
Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE++
Sbjct: 61 VQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVL 120
Query: 128 HLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---STKMLG 184
H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++
Sbjct: 121 HGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIR 180
Query: 185 IINERINFQVSPGQPSSISD-DAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEKT 243
++N+ I+ +++ Q D + + V + ++ I+++E G E L+ +
Sbjct: 181 LLNQYIDIKITMPQVEGKEDPNVQAVYEMDEAKNEQTIISEQEGIPGHSEQLLDYNKQSI 240
Query: 244 GLISDSEKAEGENKEAEIDENKKRPVEGGKQGAS-IKKLKKDKAINATAKTSRLEANTVS 302
L E + E K + VEG + + I K+ T K + + +T+
Sbjct: 241 QLGLRPLSEEVVTTLKNLLEVKDKDVEGRNEALNKILHPAKNLVELLTEKENLINESTLE 300
Query: 303 TAPRVKPDLALPVMPTEVEQ-----SILEDLRNRVHLSSAAL-PSVSFYTFINTHNGLNC 356
+ D LP PT+++ S+LE +N + L A PSV YT NT + +NC
Sbjct: 301 SPS----DPPLP--PTKMKDIDYFVSLLESEQNSLILGKNATDPSVFMYTMHNTLSAVNC 354
Query: 357 ASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTL 416
A+ S D S+ A G +DSS+ ++ G Q + + +N+ + +IG
Sbjct: 355 AAFSDDASMFALGCADSSIHLYSSTNNGPQPL---VGSQNEPLQKSSLIG---------- 401
Query: 417 YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGH 476
H+ PV+ S SP +FILS S D RLWS + +V Y GHN P+WDVQF+P G+
Sbjct: 402 ---HTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGY 458
Query: 477 YFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSS 536
YFA++SHD+TAR+W ++ PLR+ GH +DVDCV +H N Y+ATGSSD T R+WDV +
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRT 518
Query: 537 GECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLA 596
G VR+F H S + +L MS DG +AS DE G I +WDL S + H+S V++L+
Sbjct: 519 GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLS 578
Query: 597 YRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTST 656
+ + + +L SG AD V WD+T
Sbjct: 579 FSY----------------------------------DNKILVSGGADTDVNFWDLTYRN 604
Query: 657 KVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFA 696
+ E+ L TK+T + +L F+RRN A
Sbjct: 605 NLSDGEQSP------LLFNFKTKNTIIQNLSFTRRNYCLA 638
>sp|Q8SQS4|TAF5_ENCCU Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=TAF5 PE=1 SV=1
Length = 556
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 191/632 (30%), Positives = 313/632 (49%), Gaps = 102/632 (16%)
Query: 71 YSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLR 130
Y L++W SLDL+K++LL +LYP+FIH + DL+ + EA+ FF +R DH
Sbjct: 23 YVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDH-YNKSE 81
Query: 131 DLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSTKMLGIINERI 190
++++ E + + H+ E FA++ ++SK ++ + +Y+++LL+ +L + T +L I+N+ +
Sbjct: 82 EIKQFESIYTVQHIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKILNQHL 141
Query: 191 NFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLLEDSLENRLEKTGLISDSE 250
+ +V G S +++ + D + +E +L D E
Sbjct: 142 DIKVYVGPKSEERPQGIETSVVDAEIDLTTFLVSRECEDAILGD---------------E 186
Query: 251 KAEGENKEAEIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPD 310
+ ++ E + + +K+ +++K ++ KP+
Sbjct: 187 QYRYDHLETYVLQLRKQ-----------REMKPKDSV-------------------YKPN 216
Query: 311 LALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
+ + E+E+ L+DL RV ++ LPS+ YT NT+ GL A IS D L+A GF
Sbjct: 217 ASQ--IHAEIEK--LKDLCKRVAVNKNNLPSICCYTIHNTYEGLTAAEISNDLKLMACGF 272
Query: 371 SDSSLKVWDMAK--LGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSAS 428
DS ++V+ + L + SS L + T E+ G SY L GHSGPVY
Sbjct: 273 KDSYVEVYSLTNESLKKLKSSSELAKSDIKTLNEEKFEEVGS--SYKLV-GHSGPVYGLK 329
Query: 429 FSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTAR 488
F F++SSS D T+ LWS L L YK H +PVW V P ++FAS + DR A
Sbjct: 330 FFSSNKFLVSSSQDCTVCLWSLDLLCLLAVYKAHAFPVWCVDVAPNDYFFASGAGDRQAI 389
Query: 489 IWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRS 548
+WS+ +P R++ LSDV V++H N +Y+ TGSSD VR+ D+S+ VRIF GH
Sbjct: 390 VWSVMTSKPERLIISSLSDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASVVRIFCGHTD 449
Query: 549 MILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYL 608
+ + +S G+++ASG +D T+++WD+ S + + +GH + V+
Sbjct: 450 TVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVF--------------- 494
Query: 609 KISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTN 668
S F FY GS+LAS AD +V+LWD +T+ K G
Sbjct: 495 ------SVSFCFY-------------GSVLASCGADNSVRLWD--------RTDHKGGC- 526
Query: 669 RLRSLKTLPTKSTPVYSLQFSRRNLLFAAGAL 700
L T TK+TP+ ++F RN++ G
Sbjct: 527 ----LGTYYTKNTPLLCVKFGYRNIISCTGPF 554
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 220/422 (52%), Gaps = 49/422 (11%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E +++ P++ P++ E +L++ RV +L +
Sbjct: 204 RTDYQLYASGGSSRTENSSLE-----PPEVPSPILQNEAALEVLQESIKRVKDGPPSLTT 258
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLGQQ---AVSSGLQGEN 396
+ FY F NT LN A IS D L+A GF +S +K+W + KL + +S ++
Sbjct: 259 ICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSEPHHVDTSRIRLAC 318
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
DT E+ N L +GH GPVYS F +LS S D +IR W N
Sbjct: 319 DTLEEEENEEDNTGTEMKIL-RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNT 377
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWDV +P YFAS SHDRTAR+WS DR PLRI AGHL+DVDCV++H N
Sbjct: 378 VLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +LSL+ SP+G+Y+AS ED + +WDL
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497
Query: 577 ASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGS 636
ASG L GHT + +LA+ S +
Sbjct: 498 ASGTLFKELRGHTDSITSLAF----------------------------------SPDSG 523
Query: 637 LLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFA 696
L+AS S D +V++WD+ ++ T + L + T + + V S+QF NLL
Sbjct: 524 LIASASMDNSVRVWDIRST--CCNTPADGSSGELVGVYT--GQMSNVLSVQFMACNLLLV 579
Query: 697 AG 698
G
Sbjct: 580 TG 581
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 142/612 (23%), Positives = 251/612 (41%), Gaps = 98/612 (16%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGP 64
QV V+ YLK++ + ++E L+ ++ +++ + + + + P
Sbjct: 8 QVQVAVSCYLKRRQYVDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANAVSAAPCQAEP 67
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFR--- 121
+Y+ ++ +LRS+ S Y E++ +LYP+F++ ++LV G +F++ F
Sbjct: 68 QQYEVQFGRLRSFLTDSDSQYSREVMPLLYPLFVYLHLNLVQSGPKSTVESFYSRFHGMF 127
Query: 122 -----EDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHK 176
+ + L+ Q ++ +LS L + +K +++ + SY L++YL
Sbjct: 128 LQNASQKDVIEQLQTTQTIQDILSNFQLR------AFLDNKYVVRLQEDSYNYLIRYLQS 181
Query: 177 TQSTKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQDAANQINQKEVHWGLL--ED 234
+T + ++ I+ V P + + D ++ GS++ + + EV +L E
Sbjct: 182 DNNTALCKVLAVHIHLDVQPAKRT----DYQLYASGGSSRTENSSLEPPEVPSPILQNEA 237
Query: 235 SLENRLEKTGLISDSEKA------------EGENKEAEIDENKKRPVEGGKQGASI---- 278
+LE E + D + E AEI + K + G + I
Sbjct: 238 ALEVLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKL-LAAGFDNSCIKLWS 296
Query: 279 ---KKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLS 335
KKLK + T++ RL +T+ + + T E IL R H
Sbjct: 297 LRSKKLKSEPHHVDTSRI-RLACDTLEEEENEEDN-------TGTEMKIL-----RGHCG 343
Query: 336 SAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE 395
P S ++ L+C+ D S++ WD+ + G
Sbjct: 344 ----PVYSTRFLADSSGLLSCS-------------EDMSIRYWDLGSFTNTVLYQG---- 382
Query: 396 NDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
H+ PV+ SP + S S D T RLWS
Sbjct: 383 ------------------------HAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYP 418
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
L Y GH V V+F+P +Y A+ S D+T R+WS + +R+ GH V + +
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSP 478
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
N Y+A+ D+ ++LWD++SG + GH I SLA SPD +AS D ++ +WD
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 538
Query: 576 LASGRCVTPLMG 587
+ S C TP G
Sbjct: 539 IRSTCCNTPADG 550
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 262 bits (670), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 214/422 (50%), Gaps = 49/422 (11%)
Query: 282 KKDKAINATAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPS 341
+ D + A+ +SR E N + PD+ P++ E +L++ RV +L +
Sbjct: 204 RTDYQLYASGSSSRSENNGLE-----PPDMPSPILQNEAALEVLQESIKRVKDGPPSLTT 258
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDM--AKLG---QQAVSSGLQGEN 396
+ FY F NT LN A IS D L+A GF +S +K+W + KL Q S +
Sbjct: 259 ICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLAC 318
Query: 397 DTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
D ED N L +GH GPVYS F +LS S D +IR W N
Sbjct: 319 DILEEEDDEDDNAGTEMKIL-RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNT 377
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
V Y+GH YPVWD+ +P YFAS SHDRTAR+WS DR PLRI AGHL+DVDCV++H N
Sbjct: 378 VLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN 437
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
NY+ATGS+DKTVRLW G VR+F GHR +LSLA SP+G+Y+AS ED + +WDL
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Query: 577 ASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGS 636
ASG L GHT + +L + S +
Sbjct: 498 ASGTLYKELRGHTDNITSLTF----------------------------------SPDSG 523
Query: 637 LLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFA 696
L+AS S D +V++WD+ + ++ L + T + + V S+QF NLL
Sbjct: 524 LIASASMDNSVRVWDIRNT--YCSAPADGSSSELVGVYT--GQMSNVLSVQFMACNLLLV 579
Query: 697 AG 698
G
Sbjct: 580 TG 581
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/584 (21%), Positives = 248/584 (42%), Gaps = 57/584 (9%)
Query: 5 QVVEFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGP 64
Q+ V+ YLK++ + +++ L+ ++ ++++ + + + + P
Sbjct: 8 QIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSAAPCQAEP 67
Query: 65 ARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDH 124
+Y+ ++ +LR++ S + HE++ +LYP+F++ ++LV +F++ F H
Sbjct: 68 QQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRF---H 124
Query: 125 EMMHLRDLQK--LEGVLSPSHLEEMEFAHSLR---HSKVNIKICQYSYELLLQYLHKTQS 179
M QK +E + + ++++ LR +K +++ + SY L++YL +
Sbjct: 125 GMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQSDNN 184
Query: 180 TKMLGIINERINFQVSPGQPSSISDDAEIVTLIGSNQ-----DAANQINQKEVHWGLLED 234
T + ++ I+ V P + + A + N D + I Q E +L++
Sbjct: 185 TALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALEVLQE 244
Query: 235 SLENRLEKTGLISDSEKAEGENKE-----AEIDENKKRPVEGGKQGASIKKLKKDKAINA 289
S++ + ++ N E AEI + K G S KL ++
Sbjct: 245 SIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDN--SCIKLWSLRSKKL 302
Query: 290 TAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFIN 349
++ +++ + + A + + E IL R H P S +
Sbjct: 303 KSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKIL-----RGHCG----PVYSTRFLAD 353
Query: 350 THNGLNCASISQDGSLV---AGGFSDSSL------KVWDMAKLGQQAVSSGLQGENDTTP 400
+ L+C S+D S+ G F+++ L VWD+ + G +D T
Sbjct: 354 SSGLLSC---SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFAS--GSHDRTA 408
Query: 401 REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
R + R +Y GH V F P +++ + S D T+RLWS + ++ +
Sbjct: 409 R---LWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT 465
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV + F+P G Y AS+ D+ ++W + + + GH ++ + + + I
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI 525
Query: 521 ATGSSDKTVRLWDV-----------SSGECVRIFIGHRSMILSL 553
A+ S D +VR+WD+ SS E V ++ G S +LS+
Sbjct: 526 ASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSV 569
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 175/347 (50%), Gaps = 30/347 (8%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG------------ 391
YT N +N + S DG+ +A G D ++++WD++ + G
Sbjct: 1151 LYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP 1210
Query: 392 -----LQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIR 446
G +D T R + + +QGH+ V S F+P G + S S+D T+R
Sbjct: 1211 DGSTLASGSSDQTVR---LWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVR 1267
Query: 447 LWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
LW + L ++GH V V FNP G AS S D+T R+W + + L GH S
Sbjct: 1268 LWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTS 1327
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V V + + +A+GS D+TVRLW +SSGEC+ F+GH + + S+ SPDG +ASG
Sbjct: 1328 WVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGS 1387
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR--FLLLVTNAYLKISD--KVSTGFLFYS 622
D T+ +W ++SG+C+ L GH + V ++ + LL + + + +S+G Y+
Sbjct: 1388 GDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYT 1447
Query: 623 L----TIIYFGCASCEGSLLASGSADCTVKLWDVTTS--TKVLKTEE 663
L + S +G +LASGS D T+KLWDV T K LK+E+
Sbjct: 1448 LHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSEK 1494
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 197/396 (49%), Gaps = 65/396 (16%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG-----LQGENDT 398
YT + + S DG+++A G D +++WD +SSG LQG +
Sbjct: 1067 LYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD--------ISSGNCLYTLQGYT-S 1117
Query: 399 TPREDIIGPNG-------------------RKRSYTLYQGHSGPVYSASFSPLGDFILSS 439
R + PNG +K YTL QGH+ V + +FSP G + S
Sbjct: 1118 WVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTL-QGHTNWVNAVAFSPDGATLASG 1176
Query: 440 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
S D T+RLW + L +GH V V FNP G AS S D+T R+W ++ + L
Sbjct: 1177 SGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLC 1236
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
GH S V+ V ++ + + +A+GSSDKTVRLWD+SS +C+ F GH + + S+A +PDG
Sbjct: 1237 TFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDG 1296
Query: 560 RYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR--FLLLVTNAYLKISD--KVS 615
+ASG D T+ +W+++S +C+ GHTS V ++ + +L + + + +S
Sbjct: 1297 SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSIS 1356
Query: 616 TGFLFYSL--------TIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGT 667
+G Y+ ++I+ S +G++LASGS D TV+LW +++
Sbjct: 1357 SGECLYTFLGHTNWVGSVIF----SPDGAILASGSGDQTVRLWSISSG------------ 1400
Query: 668 NRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
+ L TL + V S+ FS L A+G+ +T
Sbjct: 1401 ---KCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQT 1433
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 161/320 (50%), Gaps = 49/320 (15%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG 409
HN +N SQDG ++A G D ++++WD +SSG
Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWD--------ISSG------------------ 938
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ ++GH+ V S FSP + S S+D T+RLW L ++GH V+ V
Sbjct: 939 --QCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSV 996
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
FN G A+ S D+T R+W + Q I GH S V V + + +A+GS D+TV
Sbjct: 997 AFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTV 1056
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
RLWD+SSG C+ GH S + S+ SPDG +ASG +D + +WD++SG C+ L G+T
Sbjct: 1057 RLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYT 1116
Query: 590 SCVWTLAYRFLLLVTNAY----------LKISDKVSTGFLFYSL----TIIYFGCASCEG 635
S V RFL+ N +++ D +S+ Y+L + S +G
Sbjct: 1117 SWV-----RFLVFSPNGVTLANGSSDQIVRLWD-ISSKKCLYTLQGHTNWVNAVAFSPDG 1170
Query: 636 SLLASGSADCTVKLWDVTTS 655
+ LASGS D TV+LWD+++S
Sbjct: 1171 ATLASGSGDQTVRLWDISSS 1190
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 40/350 (11%)
Query: 341 SVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP 400
++++ F + + S DG L A G S ++ W+ A G++ ++
Sbjct: 854 NLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAAT-GKELLTC---------- 902
Query: 401 REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
+GH+ V S FS G + S S D T+RLW L +K
Sbjct: 903 -----------------KGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK 945
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH V V F+P AS S D+T R+W + + L I GH V V ++++ + +
Sbjct: 946 GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSML 1005
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
ATGS D+TVRLWD+SS +C IF GH S + S+ S DG +ASG +D T+ +WD++SG
Sbjct: 1006 ATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGN 1065
Query: 581 CVTPLMGHTSCVWTLAYR--FLLLVT---NAYLKISDKVSTGFLFYSL----TIIYFGCA 631
C+ L GHTSCV ++ + +L + + +++ D +S+G Y+L + + F
Sbjct: 1066 CLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD-ISSGNCLYTLQGYTSWVRFLVF 1124
Query: 632 SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKST 681
S G LA+GS+D V+LWD+ +S K L T + TN + ++ P +T
Sbjct: 1125 SPNGVTLANGSSDQIVRLWDI-SSKKCLYTLQGH-TNWVNAVAFSPDGAT 1172
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 184/386 (47%), Gaps = 45/386 (11%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSG------------ 391
Y F + + + DGS++A G D ++++WD++ + G
Sbjct: 983 LYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS 1042
Query: 392 -----LQGENDTTPR-EDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTI 445
G +D T R DI N YTL QGH+ V S FSP G + S D +
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCL---YTL-QGHTSCVRSVVFSPDGAMLASGGDDQIV 1098
Query: 446 RLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
RLW L +G+ V + F+P G A+ S D+ R+W + + L + GH
Sbjct: 1099 RLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHT 1158
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
+ V+ V + + +A+GS D+TVRLWD+SS +C+ I GH S + S+ +PDG +ASG
Sbjct: 1159 NWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASG 1218
Query: 566 DEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR-----FLLLVTNAYLKISDKVSTGFL- 619
D T+ +W++ S +C+ GHTS V ++ + ++ +++ D S+ L
Sbjct: 1219 SSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLH 1278
Query: 620 -FYSLTIIYFGCA-SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 677
F T A + +GS+LASGS D TV+LW++++S + L T
Sbjct: 1279 TFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSS---------------KCLHTFQ 1323
Query: 678 TKSTPVYSLQFSRRNLLFAAGALSKT 703
++ V S+ FS + A+G+ +T
Sbjct: 1324 GHTSWVSSVTFSPDGTMLASGSDDQT 1349
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 126/245 (51%), Gaps = 28/245 (11%)
Query: 341 SVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTP 400
S +TF N +N + + DGS++A G D ++++W+++
Sbjct: 1274 SKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISS------------------ 1315
Query: 401 REDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
+ +QGH+ V S +FSP G + S S D T+RLWS L +
Sbjct: 1316 ----------SKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFL 1365
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH V V F+P G AS S D+T R+WS+ + L + GH + V + + + +
Sbjct: 1366 GHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLL 1425
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+GS D+TVRLW++SSGEC+ GH + + S+A S DG +ASG +D TI +WD+ +G
Sbjct: 1426 ASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGE 1485
Query: 581 CVTPL 585
C+ L
Sbjct: 1486 CIKTL 1490
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 49/162 (30%)
Query: 542 IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLL 601
+F +L++A SPDG+ A+GD G + W+ A+G+ + GH S V
Sbjct: 859 VFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWV--------- 909
Query: 602 LVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKT 661
S GF S +G +LASGS D TV+LWD+++
Sbjct: 910 ------------NSVGF-------------SQDGKMLASGSDDQTVRLWDISSG------ 938
Query: 662 EEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
+ LKT ++ V S+ FS +L+ A+G+ +T
Sbjct: 939 ---------QCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQT 971
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 156/335 (46%), Gaps = 30/335 (8%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAK-LGQQAVSSGLQGENDT------TPREDIIGPNGR 410
+ S DG VA G D ++K+WD A G Q L+G + +P + +
Sbjct: 848 AFSADGQRVASGSDDKTIKIWDTASGTGTQT----LEGHGGSVWSVAFSPDRERVASGSD 903
Query: 411 KRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ ++ +GH G V S +FSP G + S S D TI++W
Sbjct: 904 DKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTL 963
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH V V F+P G AS S D+T +IW + + GH V V + +
Sbjct: 964 EGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR 1023
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+A+GS DKT+++WD +SG C + GH + S+ SPDG+ +ASG +D TI +WD SG
Sbjct: 1024 VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSG 1083
Query: 580 RCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVS---TGFLFYSLTIIYFGCA 631
C L GH VW++A+ R + +KI D S T L ++
Sbjct: 1084 TCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAF 1143
Query: 632 SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
S +G +ASGS D T+K+WD + T E G
Sbjct: 1144 SPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGG 1178
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 151/332 (45%), Gaps = 45/332 (13%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIG 406
+ H G + + S DG VA G D ++K+WD A SG +
Sbjct: 921 LEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAA--------SGTCTQT---------- 962
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
+GH V S +FSP G + S S D TI++W T +GH V
Sbjct: 963 ----------LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSV 1012
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
W V F+P G AS S D+T +IW + + GH V V + + +A+GS D
Sbjct: 1013 WSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDD 1072
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
T+++WD SG C + GH + S+A SPDG+ +ASG DGTI +WD ASG C L
Sbjct: 1073 HTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE 1132
Query: 587 GHTSCVWTLAY-----RFLLLVTNAYLKISDKVS-------TGFLFYSLTIIYFGCASCE 634
GH V ++A+ R + +KI D S G + ++ + S +
Sbjct: 1133 GHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAF----SPD 1188
Query: 635 GSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
G +ASGS+D T+K+WD + T E G
Sbjct: 1189 GQRVASGSSDKTIKIWDTASGTCTQTLEGHGG 1220
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S +FS G + S S D TI++W T +GH VW V F+P
Sbjct: 838 EGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRER 897
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D+T +IW + + GH V V + + +A+GS D T+++WD +SG
Sbjct: 898 VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASG 957
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
C + GH S +LS+A SPDG+ +ASG D TI +WD ASG C L GH VW++A+
Sbjct: 958 TCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAF 1017
Query: 598 -----RFLLLVTNAYLKISDKVS-------TGFLFYSLTIIYFGCASCEGSLLASGSADC 645
R + +KI D S G + ++++ S +G +ASGS D
Sbjct: 1018 SPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVF----SPDGQRVASGSDDH 1073
Query: 646 TVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
T+K+WD + T +TL V+S+ FS A+G++ T
Sbjct: 1074 TIKIWDAVSGT---------------CTQTLEGHGDSVWSVAFSPDGQRVASGSIDGT 1116
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 140/316 (44%), Gaps = 54/316 (17%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT------TPREDIIGPNGRK 411
+ S DG VA G D ++K+WD A + L+G + +P +
Sbjct: 974 AFSPDGQRVASGSGDKTIKIWDTAS---GTCTQTLEGHGGSVWSVAFSPDGQRVASGSDD 1030
Query: 412 RSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
++ ++ +GH G V S FSP G + S S D TI++W +
Sbjct: 1031 KTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE 1090
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH VW V F+P G AS S D T +IW + + GH V V + + +
Sbjct: 1091 GHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRV 1150
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+GS D T+++WD +SG C + GH + S+A SPDG+ +ASG D TI +WD ASG
Sbjct: 1151 ASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGT 1210
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
C L GH V ++A+ S +G +AS
Sbjct: 1211 CTQTLEGHGGWVQSVAF----------------------------------SPDGQRVAS 1236
Query: 641 GSADCTVKLWDVTTST 656
GS+D T+K+WD + T
Sbjct: 1237 GSSDNTIKIWDTASGT 1252
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 29/270 (10%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRS---- 413
+ S DG VA G D ++K+WD A + L+G + + P+G++ +
Sbjct: 1016 AFSPDGQRVASGSDDKTIKIWDTAS---GTCTQTLEGHGGWV-QSVVFSPDGQRVASGSD 1071
Query: 414 -YTL-------------YQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
+T+ +GH V+S +FSP G + S S D TI++W
Sbjct: 1072 DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTL 1131
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
+GH V V F+P G AS S D T +IW + + GH V V + +
Sbjct: 1132 EGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 1191
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+A+GSSDKT+++WD +SG C + GH + S+A SPDG+ +ASG D TI +WD ASG
Sbjct: 1192 VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASG 1251
Query: 580 RCVTPL-MGHTSCVWTLAYRFLLLVTNAYL 608
C L +G T+ + Y TNAY+
Sbjct: 1252 TCTQTLNVGSTATCLSFDY------TNAYI 1275
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 115/232 (49%), Gaps = 8/232 (3%)
Query: 443 TTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMA 502
+TI + + NA +GH V V F+ G AS S D+T +IW + +
Sbjct: 821 STISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLE 880
Query: 503 GHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYM 562
GH V V + + +A+GS DKT+++WD +SG C + GH + S+A SPDG+ +
Sbjct: 881 GHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV 940
Query: 563 ASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVS-- 615
ASG +D TI +WD ASG C L GH S V ++A+ R + +KI D S
Sbjct: 941 ASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT 1000
Query: 616 -TGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
T L ++ S +G +ASGS D T+K+WD + T E G
Sbjct: 1001 CTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGG 1052
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 348 INTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIG 406
+ H G ++ + S DG VA G D ++K+WD A SG +
Sbjct: 1131 LEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAA--------SGTCTQT---------- 1172
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
+GH G V S +FSP G + S S+D TI++W T +GH V
Sbjct: 1173 ----------LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWV 1222
Query: 467 WDVQFNPQGHYFASSSHDRTARIW 490
V F+P G AS S D T +IW
Sbjct: 1223 QSVAFSPDGQRVASGSSDNTIKIW 1246
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 161/362 (44%), Gaps = 77/362 (21%)
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR 401
+S F T + A+ S +G L+A +D ++VW+ V SG
Sbjct: 633 LSCCVFTETLGNILSAAFSPEGQLLATCDTDCHVRVWE--------VKSG---------- 674
Query: 402 EDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKG 461
+ + +GHS V FSP G+ + S AD ++LWS + + G
Sbjct: 675 ----------KLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTG 724
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIA 521
H + V+ V F+P G AS+S D+T ++W + L+ + GH V CV + + N +A
Sbjct: 725 HEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLA 784
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRC 581
+ ++D T++LWDVS G+C+R H + S+A S DG+ +ASG D TI +W+ +G C
Sbjct: 785 SSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGEC 844
Query: 582 VTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASG 641
+ +GHT+ V+++AY S + +L SG
Sbjct: 845 LKTYIGHTNSVYSIAY----------------------------------SPDSKILVSG 870
Query: 642 SADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALS 701
S D T+KLWD T +KTL + V S+ FS A +L
Sbjct: 871 SGDRTIKLWDCQTHI---------------CIKTLHGHTNEVCSVAFSPDGQTLACVSLD 915
Query: 702 KT 703
++
Sbjct: 916 QS 917
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 172/359 (47%), Gaps = 53/359 (14%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRS 413
+ C + S DG+ +A +D ++K+WD VS G +
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWD--------VSQG--------------------KC 802
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNP 473
+ H+G V S +FS G + S S D TI++W+ L Y GH V+ + ++P
Sbjct: 803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP 862
Query: 474 QGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
S S DRT ++W ++ + GH ++V V + + +A S D++VRLW+
Sbjct: 863 DSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWN 922
Query: 534 VSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVW 593
+G+C++ + G+ L +A SPD + +ASG D T+ +WD +G+ ++ L GHT ++
Sbjct: 923 CRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIY 982
Query: 594 TLAYR-----FLLLVTNAYLKISDKVSTGFLFYSLT----IIYFGCASCEGSLLASGSAD 644
+A+ T++ +++ + +STG F L +Y +G ++A+GSAD
Sbjct: 983 GIAFSPDSQTLASASTDSSVRLWN-ISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSAD 1041
Query: 645 CTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
CTVKLW+++T + LKTL S + + +S L A+ + ++
Sbjct: 1042 CTVKLWNISTG---------------QCLKTLSEHSDKILGMAWSPDGQLLASASADQS 1085
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 36/338 (10%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT------T 399
T+I N + + S D ++ G D ++K+WD L G + +
Sbjct: 847 TYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQT---HICIKTLHGHTNEVCSVAFS 903
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSA-----------SFSPLGDFILSSSADTTIRLW 448
P + +S L+ +G A +FSP + S S D T++LW
Sbjct: 904 PDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLW 963
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ + +GH ++ + F+P AS+S D + R+W++ Q +I+ H V
Sbjct: 964 DWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWV 1023
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
V +H IATGS+D TV+LW++S+G+C++ H IL +A SPDG+ +AS D
Sbjct: 1024 YAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASAD 1083
Query: 569 GTIMMWDLASGRCVTPLMGHTSCVWTLAYR-----FLLLVTNAYLKISD-------KVST 616
++ +WD +GRCV L GH++ V++ + T+ +KI D K T
Sbjct: 1084 QSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLT 1143
Query: 617 GFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTT 654
G + I + S +G +LAS S D TV++WDV T
Sbjct: 1144 GHTNWVFDIAF----SPDGKILASASHDQTVRIWDVNT 1177
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 30/329 (9%)
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT------TPREDII 405
N + + S DG +A D S+++W+ + GQ G D +P I+
Sbjct: 895 NEVCSVAFSPDGQTLACVSLDQSVRLWN-CRTGQ--CLKAWYGNTDWALPVAFSPDRQIL 951
Query: 406 GPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
++ L+ +GH+ +Y +FSP + S+S D+++RLW+
Sbjct: 952 ASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQ 1011
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
H V+ V F+PQG A+ S D T ++W++ Q L+ ++ H + + W
Sbjct: 1012 CFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWS 1071
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
+ +A+ S+D++VRLWD +G CV I GH + + S SP+G +A+ D T+ +W
Sbjct: 1072 PDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIW 1131
Query: 575 DLASGRCVTPLMGHTSCVWTLAY----RFLLLVT-NAYLKISDKVSTGFLFYSLT----I 625
D G+C+ L GHT+ V+ +A+ + L + + ++I D V+TG + +
Sbjct: 1132 DWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWD-VNTGKCHHICIGHTHL 1190
Query: 626 IYFGCASCEGSLLASGSADCTVKLWDVTT 654
+ S +G ++ASGS D TV++W+V T
Sbjct: 1191 VSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 118/223 (52%), Gaps = 28/223 (12%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSG 422
G ++A G +D ++K+W+++ G+ T E HS
Sbjct: 1032 GKIIATGSADCTVKLWNIST-----------GQCLKTLSE-----------------HSD 1063
Query: 423 PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSS 482
+ ++SP G + S+SAD ++RLW + +GH+ V+ F+P G A+ S
Sbjct: 1064 KILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCS 1123
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
D+T +IW + + L+ + GH + V + + + +A+ S D+TVR+WDV++G+C I
Sbjct: 1124 TDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHI 1183
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPL 585
IGH ++ S+A SPDG +ASG +D T+ +W++ +G C+ L
Sbjct: 1184 CIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQIL 1226
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 360 SQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQG 419
S DG L+A +D S+++WD R + +G
Sbjct: 1071 SPDGQLLASASADQSVRLWDCCT----------------------------GRCVGILRG 1102
Query: 420 HSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFA 479
HS VYSA FSP G+ I + S D T+++W + L GH V+D+ F+P G A
Sbjct: 1103 HSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILA 1162
Query: 480 SSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGEC 539
S+SHD+T RIW ++ + I GH V V + + +A+GS D+TVR+W+V +GEC
Sbjct: 1163 SASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGEC 1222
Query: 540 VRIFIGHR 547
++I R
Sbjct: 1223 LQILRAKR 1230
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 149/352 (42%), Gaps = 79/352 (22%)
Query: 352 NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK 411
+G+ SIS+DG +A G D ++K+W
Sbjct: 1073 DGVISISISRDGQTIASGSLDKTIKLWSR-----------------------------DG 1103
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R + GH VYS SFSP G I S +D TI+LW T L GH V +V F
Sbjct: 1104 RLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYF 1163
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+P G AS+S D + ++W Q L + GH + V VR+ + IA GS DKTV+L
Sbjct: 1164 SPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKL 1223
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
W G+ ++ GH+ + SL+ SPDG+ +AS D TI +W +A G+ V L GH
Sbjct: 1224 WHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDS 1283
Query: 592 VWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWD 651
VW + + S +G +AS S D T+KLW+
Sbjct: 1284 VWDVNF----------------------------------SSDGKAIASASRDNTIKLWN 1309
Query: 652 VTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
+ G L+T S VY++ F + + A+ +L T
Sbjct: 1310 ------------RHGIE----LETFTGHSGGVYAVNFLPDSNIIASASLDNT 1345
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 23/330 (6%)
Query: 342 VSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPR 401
+ TF G+ + D +++A D+++++W + V +G G +
Sbjct: 1313 IELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFL 1372
Query: 402 ED--IIGPNGRKRSYTLYQGHSG----------PVYSASFSPLGDFILSSSADTTIRLWS 449
D II G + L+ G +Y SF+P GD I S++AD T+++W
Sbjct: 1373 HDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWR 1432
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ L GH+ V V F+P G AS+S D T ++W++ + + + GH +V
Sbjct: 1433 VRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVF 1492
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
V + + IA+ S+DKT+RLWD SG ++ H ++ S+ +PDG +AS D
Sbjct: 1493 WVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADK 1552
Query: 570 TIMMWDLASGRCVTPLMGHTSCVWTLAY----RFLLLVT-NAYLKISDKVSTGFLFYSLT 624
T+ +W G + GH++ V++ ++ R++ + + +KI G L +L
Sbjct: 1553 TVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQ--IDGHLLTTLP 1610
Query: 625 IIYFGCASC----EGSLLASGSADCTVKLW 650
G S +G L SGS D T K+W
Sbjct: 1611 QHQAGVMSAIFSPDGKTLISGSLDTTTKIW 1640
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 167/377 (44%), Gaps = 74/377 (19%)
Query: 347 FINTHNG----LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---- 398
+ T NG +N S S DG +A +D ++K+W +A + L+G ND+
Sbjct: 1231 LLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIAD---GKLVKTLKGHNDSVWDV 1287
Query: 399 --TPREDIIGPNGRKRSYTL----------YQGHSGPVYSASFSPLGDFILSSSADTTIR 446
+ I R + L + GHSG VY+ +F P + I S+S D TIR
Sbjct: 1288 NFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIR 1347
Query: 447 LWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
LW L + L G N V+ V F G A++ D ++W L+ + G+ +
Sbjct: 1348 LWQRPLISPLEVLAG-NSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA 1406
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
+ + + + IA+ ++DKTV++W V G+ ++ IGH + + + SPDG+ +AS
Sbjct: 1407 -IYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASAS 1465
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTII 626
D T+ +W+++ G+ L GHT V+ +++
Sbjct: 1466 RDNTVKLWNVSDGKFKKTLKGHTDEVFWVSF----------------------------- 1496
Query: 627 YFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSL 686
S +G ++AS SAD T++LWD + + K+LP + VYS+
Sbjct: 1497 -----SPDGKIIASASADKTIRLWDSFSGNLI---------------KSLPAHNDLVYSV 1536
Query: 687 QFSRRNLLFAAGALSKT 703
F+ + A+ + KT
Sbjct: 1537 NFNPDGSMLASTSADKT 1553
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 40/275 (14%)
Query: 387 AVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIR 446
AV + L+ TT ++ + R R +GH V S S S G I S S D TI+
Sbjct: 1042 AVPNNLKLATVTTLQQALFEMQERNR----LEGHKDGVISISISRDGQTIASGSLDKTIK 1097
Query: 447 LWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLS 506
LWS + GH V+ V F+P G AS D+T ++W L+ + GH
Sbjct: 1098 LWS-RDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQ 1156
Query: 507 DVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGD 566
V+ V + + +A+ SSD +++LWD +SG+ + GH + ++++ SPDG+ +A+G
Sbjct: 1157 TVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGS 1216
Query: 567 EDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTII 626
ED T+ +W G+ + L GH V +L++
Sbjct: 1217 EDKTVKLWHRQDGKLLKTLNGHQDWVNSLSF----------------------------- 1247
Query: 627 YFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKT 661
S +G LAS SAD T+KLW + K++KT
Sbjct: 1248 -----SPDGKTLASASADKTIKLWRIADG-KLVKT 1276
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 545 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR-----F 599
GH+ ++S+++S DG+ +ASG D TI +W GR L GH V+++++
Sbjct: 1070 GHKDGVISISISRDGQTIASGSLDKTIKLWS-RDGRLFRTLNGHEDAVYSVSFSPDGQTI 1128
Query: 600 LLLVTNAYLKISDKVSTGFLFYSLT-------IIYFGCASCEGSLLASGSADCTVKLWDV 652
++ +K+ + S G L ++T +YF S +G LAS S+D ++KLWD
Sbjct: 1129 ASGGSDKTIKLW-QTSDGTLLKTITGHEQTVNNVYF---SPDGKNLASASSDHSIKLWDT 1184
Query: 653 TTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
T+ + L TL S V +++FS AAG+ KT
Sbjct: 1185 TSG---------------QLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKT 1220
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 133/286 (46%), Gaps = 50/286 (17%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V + +FSP G + S S D T+RLW ++GH + V D+ F+P G
Sbjct: 498 EGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSM 557
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D TAR+W++ ++ GH V V + + + +A+GS D T+RLWDV++G
Sbjct: 558 VASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATG 617
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
+ + ++SLA SPDG + G D T+ +WD+ASG + GHT V +A+
Sbjct: 618 KERDVLQAPAENVVSLAFSPDGSMLVHG-SDSTVHLWDVASGEALHTFEGHTDWVRAVAF 676
Query: 598 RFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTK 657
S +G+LLASGS D T++LWDV
Sbjct: 677 ----------------------------------SPDGALLASGSDDRTIRLWDVAAQ-- 700
Query: 658 VLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
EE + TL + PV+S+ F A+ + T
Sbjct: 701 ----EEHT---------TLEGHTEPVHSVAFHPEGTTLASASEDGT 733
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 15/249 (6%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQG---ENDTTP 400
+T + + + S DG+L+A G D+++++WD+A ++AV G + +P
Sbjct: 494 LHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSP 553
Query: 401 REDIIGPNGRKRSYTLY-----------QGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
++ R + L+ +GH+ VY+ +FSP G + S S D TIRLW
Sbjct: 554 DGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWD 613
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ V + F+P G S D T +W + + L GH V
Sbjct: 614 VATGKERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGEALHTFEGHTDWVR 672
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
V + + +A+GS D+T+RLWDV++ E GH + S+A P+G +AS EDG
Sbjct: 673 AVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDG 732
Query: 570 TIMMWDLAS 578
TI +W +A+
Sbjct: 733 TIRIWPIAT 741
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 36/202 (17%)
Query: 490 WSMDRIQPLR--------IMAGHLSDVDCV---------RWHINCNYIATGSSDKTVRLW 532
WS R+QP R +AG L+ V +W + + SS
Sbjct: 386 WSPPRVQPPRWKQLITKKPVAGILTAVATAGLVVSFLVWQWTLPETPLRPDSSTAPSESA 445
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
D RI R + ++A SP G +A G D I +WD+ASG + L GHT V
Sbjct: 446 DPHELNEPRILTTDREAV-AVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWV 504
Query: 593 WTLAYR--FLLLVT---NAYLKISD-------KVSTGFLFYSLTIIYFGCASCEGSLLAS 640
+A+ LL + +A +++ D V G Y L I + S +GS++AS
Sbjct: 505 RAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAF----SPDGSMVAS 560
Query: 641 GSADCTVKLWDVTTSTK--VLK 660
GS D T +LW+V T T+ VLK
Sbjct: 561 GSRDGTARLWNVATGTEHAVLK 582
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 28/106 (26%)
Query: 343 SFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
+ +TF + + + S DG+L+A G D ++++WD+A
Sbjct: 660 ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAA-------------------- 699
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
+ +T +GH+ PV+S +F P G + S+S D TIR+W
Sbjct: 700 --------QEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 143/287 (49%), Gaps = 23/287 (8%)
Query: 376 KVWDM-AKLGQ--QAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPL 432
KV D+ AKL + + SG + + +P E I P R Y+L GH P+ F P+
Sbjct: 62 KVMDLEAKLAEAEKEFQSGGPNKKERSPSEWIPRPPAR---YSL-SGHRSPITRVLFHPV 117
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
++S+S D TI++W + KGH V DV F+ QG AS S D T ++W
Sbjct: 118 YSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSADMTIKLWDF 177
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILS 552
+ ++ M GH +V V + N +++ + S DKT+++W++++G CV+ F GHR + +
Sbjct: 178 QTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRT 237
Query: 553 LAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISD 612
+ ++ DG +AS D T+ +W +A+ C L H V +A+ +
Sbjct: 238 VRVNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAW-------------AP 284
Query: 613 KVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVL 659
+ G + + G + G L SGS D T+K+WD++T ++
Sbjct: 285 ESCNGHVSEVMGAEKKGRS---GPFLLSGSRDKTIKMWDISTGVCIM 328
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 155/376 (41%), Gaps = 69/376 (18%)
Query: 253 EGENKEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVK-- 308
E KEAE+ ++ G K+ S+ +L+K K ++ AK + E S P K
Sbjct: 29 EAFQKEAEMPGEIEKKYTGLLEKKWTSVIRLQK-KVMDLEAKLAEAEKEFQSGGPNKKER 87
Query: 309 -PDLALPVMPTEVEQSILEDLRNRV--HLSSAALPSVS--------------FYTFINTH 351
P +P P S RV H + + S S F + H
Sbjct: 88 SPSEWIPRPPARYSLSGHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGH 147
Query: 352 -NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGR 410
+ + S Q G L+A +D ++K+WD EN T
Sbjct: 148 TDAVQDVSFDQQGKLLASCSADMTIKLWDFQTF-----------ENIKT----------- 185
Query: 411 KRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQ 470
GH V S F P GDF++S+S D TI++W + + GH V V+
Sbjct: 186 ------MHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVR 239
Query: 471 FNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI-NCN----------- 518
N G AS S+D+T R+W + + + H V+C+ W +CN
Sbjct: 240 VNQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECIAWAPESCNGHVSEVMGAEK 299
Query: 519 ------YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
++ +GS DKT+++WD+S+G C+ +GH + + + P G+Y+ S +D TI
Sbjct: 300 KGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIR 359
Query: 573 MWDLASGRCVTPLMGH 588
+WD + RC L H
Sbjct: 360 VWDYKNKRCQKTLEAH 375
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + N+ GH++ V V F P G +
Sbjct: 145 KGHTDAVQDVSFDQQGKLLASCSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDF 204
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + + +A+ S+D+TVR+W V++
Sbjct: 205 LISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQDGSLLASCSNDQTVRVWVVANK 264
Query: 538 ECVRIFIGHRSMILSLAMSPD------------------GRYMASGDEDGTIMMWDLASG 579
EC H ++ +A +P+ G ++ SG D TI MWD+++G
Sbjct: 265 ECKAELREHEHVVECIAWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTG 324
Query: 580 RCVTPLMGHTS----CVWTLAYRFLLLVT-NAYLKISD-------KVSTGFLFYSLTIIY 627
C+ L+GH + VW ++++ + + +++ D K + +I +
Sbjct: 325 VCIMTLVGHDNWVRGVVWHPGGKYIISASDDKTIRVWDYKNKRCQKTLEAHQHFCTSIDF 384
Query: 628 FGCASCEGSLLASGSADCTVKLWD 651
A + +GS D TVK+W+
Sbjct: 385 HRSA----PYVITGSVDQTVKVWE 404
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 136/291 (46%), Gaps = 47/291 (16%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R + H G V S++FSP G +L+ S D + W T+ L GH PV +F
Sbjct: 12 RRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRF 71
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+P GH FAS+S D T R+W + R + LR++ GH V+ V + + +A+G DK V L
Sbjct: 72 SPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVML 131
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WDV SG+ +R+ +GHR I S SP +A+G D T+ +WDL R VTP + H
Sbjct: 132 WDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDL---RMVTPAVSH--- 185
Query: 592 VWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWD 651
A S +S L YS + LLASGS D T+ +W
Sbjct: 186 -------------QALEGHSANISC--LCYSAS-----------GLLASGSWDKTIHIWK 219
Query: 652 VTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 702
TTS+ +++ L T V S+ FS L A+ S+
Sbjct: 220 PTTSSLLIQ---------------LKGHVTWVKSIAFSPDELWLASAGYSR 255
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 111/286 (38%), Gaps = 73/286 (25%)
Query: 347 FINTHNG-LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
F H G +N ++ S DG ++ G D + W+ + GQ G
Sbjct: 16 FFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWE-TRSGQLLWRLG-------------- 60
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
GH+GPV FSP G S+S D T+RLW L KGH
Sbjct: 61 -------------GHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRS 107
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD---------VDCV---RW 513
V V F+P AS D+ +W + Q LR++ GH V+C+ W
Sbjct: 108 VETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSW 167
Query: 514 --------------------------HINC------NYIATGSSDKTVRLWDVSSGECVR 541
+I+C +A+GS DKT+ +W ++ +
Sbjct: 168 DSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGSWDKTIHIWKPTTSSLLI 227
Query: 542 IFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG 587
GH + + S+A SPD ++AS + +WD +G+C+ L G
Sbjct: 228 QLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKG 273
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TPREDIIGPNGRKRSYT 415
S DG L A D ++++WD+A+ V G Q +T +P + G +
Sbjct: 71 FSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVM 130
Query: 416 LYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK---G 461
L+ GH + S+ FSP + + + S D+T+ +W ++ V ++ G
Sbjct: 131 LWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEG 190
Query: 462 HNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIA 521
H+ + + ++ G AS S D+T IW L + GH++ V + + + ++A
Sbjct: 191 HSANISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA 249
Query: 522 TGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 570
+ + V++WD ++G+C+ G + + A +PDG+ + SG D T
Sbjct: 250 SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQT 298
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 495 IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLA 554
++ ++ H +V+ + + + TGS D V W+ SG+ + GH +
Sbjct: 11 VRRVKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCR 70
Query: 555 MSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR--FLLLVTNAYLK--I 610
SPDG AS D T+ +WD+A +C+ L GH V T+++ L + + K +
Sbjct: 71 FSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVM 130
Query: 611 SDKVSTGFLFYSLTIIYFGCASCEGS----LLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
V +G + L S + S LA+GS D TV +WD+ T +
Sbjct: 131 LWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAV------- 183
Query: 667 TNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
S + L S + L +S LL A+G+ KT
Sbjct: 184 -----SHQALEGHSANISCLCYSASGLL-ASGSWDKT 214
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 413 SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
S+ +GHS + +S G + S S D TI +W ++ L+ KGH V + F+
Sbjct: 184 SHQALEGHSANISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFS 242
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVR 530
P + AS+ + R ++W + + L + G L + + + +G++D+T R
Sbjct: 243 PDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAADQTRR 300
>sp|Q7T394|LIS1A_DANRE Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3
Length = 410
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 38/275 (13%)
Query: 396 NDTTPREDIIGPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
N+ +I GP G+KR Y L GH PV F P+ I+S+S D T
Sbjct: 73 NEAKEEINIGGPIGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVIVSASEDAT 131
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
I++W + KGH V D+ F+ G AS S D T ++W + +R M GH
Sbjct: 132 IKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+V V N ++I + S DKT+++W+V++G CV+ F GHR + + + DG +AS
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIAS 251
Query: 565 GDEDGTIMMWDLASGRCVTPLMGHTSCVWTL------AYRFLLLVTNAYLKISDKVSTGF 618
D T+ +W +A+ C L H V + A+ +L T + K S K
Sbjct: 252 SSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGK----- 306
Query: 619 LFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVT 653
G L SGS D T+K+WDV+
Sbjct: 307 ---------------PGPFLLSGSRDKTIKMWDVS 326
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN------------------- 518
ASSS+D+T R+W + + + H V+C+ W
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPG 308
Query: 519 -YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
++ +GS DKT+++WDVS G C+ +GH + + + + P G+Y+ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC L H V +L +
Sbjct: 369 NKRCTKTLSAHEHFVTSLDF 388
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 45/244 (18%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++A+G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGY 225
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
CV GH W R + +G+L+AS
Sbjct: 226 CVKTFTGHRE--WVRMVR--------------------------------PNQDGTLIAS 251
Query: 641 GSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGAL 700
S D TV++W V +TK K E + + + + P + P +L A G+
Sbjct: 252 SSNDQTVRVWVV--ATKECKAELREHEHVVECISWAPESAHP---------TILEATGSE 300
Query: 701 SKTS 704
+K S
Sbjct: 301 TKKS 304
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 8/188 (4%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ + I
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVA---TKECKAELREHEHVV---ECI 282
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
T+ + +G S P G F+LS S D TI++W + L+ GH+
Sbjct: 283 SWAPESAHPTILEA-TGSETKKSGKP-GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V +P G Y S + D+T RIW + + ++ H V + +H Y+ TGS
Sbjct: 341 VRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 37/256 (14%)
Query: 372 DSSLKVWDMAKLGQQAVSSGLQGENDTTPREDI-IGPNGRKRS------------YTLYQ 418
D+S+KVWD + G+ L+G D+ +D+ P+G+ + +T+YQ
Sbjct: 143 DASIKVWDY-ETGE--FEHTLKGHTDSV--QDVAFDPSGKFLASCSADMQVKLWDFTIYQ 197
Query: 419 ------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
GH V S +F P GDF++S+S D TI++W + GH + V+ +
Sbjct: 198 CIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSVRPS 257
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI---NCN----------Y 519
P+G+ AS S+D T RIWS++ + ++ GH V+C+ W N N
Sbjct: 258 PEGNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSLL 317
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ +GS D+T+R WDV+ G C+ + IGH + + L P GR + S +D TI +WDL +
Sbjct: 318 LVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNR 377
Query: 580 RCVTPLMGHTSCVWTL 595
RC L H+ V +L
Sbjct: 378 RCHKTLNAHSHFVTSL 393
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 53/351 (15%)
Query: 385 QQAVSSGLQGE------NDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
Q A+ G+ G +D + R D+ +TL GH P+ F P + +S
Sbjct: 81 QNAIGFGVAGAAPGSGLSDRSDRRDVDAIPRPPAKFTL-TGHRSPITRVLFHPHYNVFVS 139
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPL 498
+S D +I++W + KGH V DV F+P G + AS S D ++W Q +
Sbjct: 140 ASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSADMQVKLWDFTIYQCI 199
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
+ + GH +V V + + +++ + S DKT+++W+VS+G C + FIGH I S+ SP+
Sbjct: 200 KTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSVRPSPE 259
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY---------------RFLLLV 603
G +AS D TI +W + S C L GH V +A+ LLLV
Sbjct: 260 GNLLASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSLLLV 319
Query: 604 TNAY---LKISDKVSTGFLFYSLT--------IIYFGCASCEGSLLASGSADCTVKLWDV 652
+ + ++ D V+ G + L +++ G LL S S D T+++WD+
Sbjct: 320 SGSRDRTIRFWD-VNIGICLFVLIGHDNWVRQLVFHP----HGRLLLSASDDKTIRVWDL 374
Query: 653 TTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 703
NR R KTL S V SL +R G++ +T
Sbjct: 375 --------------KNR-RCHKTLNAHSHFVTSLDVNRLAPYAITGSVDQT 410
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 17/189 (8%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TFI + S +G+L+A +D ++++W + Q V G E ++
Sbjct: 243 TFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIWSVESRECQVVLRG---------HEHVV 293
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFIL-SSSADTTIRLWSTKLNANLVCYKGHNY 464
+ H + S S +L S S D TIR W + L GH+
Sbjct: 294 -------ECIAWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDN 346
Query: 465 PVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGS 524
V + F+P G S+S D+T R+W + + + + H V + + Y TGS
Sbjct: 347 WVRQLVFHPHGRLLLSASDDKTIRVWDLKNRRCHKTLNAHSHFVTSLDVNRLAPYAITGS 406
Query: 525 SDKTVRLWD 533
D+T+ +WD
Sbjct: 407 VDQTIHIWD 415
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 31/324 (9%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK-- 411
L ++++ GS G D + K+WD A G++ + L+G + P G K
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTAS-GEEL--NTLEGHRNVVYAIAFNNPYGDKIA 151
Query: 412 ----------------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+ Y ++GH+ + SF+P + + S DTT +LW +
Sbjct: 152 TGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEE 211
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
+ +GH+ + + FN G + S D T +W D + + I+ GH +++ ++
Sbjct: 212 VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNW 271
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+C+ I TGS DKT +LWD ++G+CV GH IL G+ +A+ DGT ++
Sbjct: 272 DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 576 LASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVSTGFLFYSL---TIIY 627
A+ +C+ L GH + +++ L ++ +I D TG L T
Sbjct: 332 AATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWD-AQTGQCLQVLEGHTDEI 390
Query: 628 FGCA-SCEGSLLASGSADCTVKLW 650
F CA + +G+++ +GS D T ++W
Sbjct: 391 FSCAFNYKGNIVITGSKDNTCRIW 414
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 40/251 (15%)
Query: 409 GRKRSYTLY-----QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
G+ ++T Y + H P+ + + + G ++ S D T +LW T L +GH
Sbjct: 75 GQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHR 134
Query: 464 YPVWDVQFN-PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIAT 522
V+ + FN P G A+ S D+T ++WS++ + GH +++ C+ ++ +AT
Sbjct: 135 NVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
Query: 523 GSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCV 582
GS D T +LWD+ +GE V GH + I+SL+ + G + +G D T+++WD +GR V
Sbjct: 195 GSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Query: 583 TPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGS 642
L+GH + + + ++ + + SL+ +GS
Sbjct: 255 NILIGHCAEISSASFNW----------------------------------DCSLILTGS 280
Query: 643 ADCTVKLWDVT 653
D T KLWD T
Sbjct: 281 MDKTCKLWDAT 291
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
K H P+ +V N G F + S+DRT ++W + L + GH + V + + N Y
Sbjct: 89 KAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAF--NNPY 146
Query: 520 ---IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
IATGS DKT +LW V +G+C F GH + I+ L+ +P +A+G D T +WD+
Sbjct: 147 GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 577 ASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGS 636
+G V L GH++ + +L++ + G
Sbjct: 207 QNGEEVYTLRGHSAEIISLSF----------------------------------NTSGD 232
Query: 637 LLASGSADCTVKLWDVTTSTKV 658
+ +GS D TV +WD T KV
Sbjct: 233 RIITGSFDHTVVVWDADTGRKV 254
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 35/162 (21%)
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMS- 556
+++ H+ + V + + + TGS D+T +LWD +SGE + GHR+++ ++A +
Sbjct: 85 FKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNN 144
Query: 557 PDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVST 616
P G +A+G D T +W + +G+C GHT+ + L++
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF------------------- 185
Query: 617 GFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKV 658
+ + +L+A+GS D T KLWD+ +V
Sbjct: 186 ---------------NPQSTLVATGSMDTTAKLWDIQNGEEV 212
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 124/261 (47%), Gaps = 30/261 (11%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+E I P R Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 91 PKEWIPRPPER---YAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGH V D+ F+ G AS S D T ++W + +R M GH +V V N ++
Sbjct: 147 KGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W +AS
Sbjct: 207 IISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASK 266
Query: 580 RCVTPLMGHTSCVWTL------AYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASC 633
C L H V + A+ +L T++ K S K
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILDATSSESKKSGK-------------------- 306
Query: 634 EGSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 307 PGPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 36/266 (13%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V+S
Sbjct: 207 IISASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASK 266
Query: 538 ECVRIFIGHRSMILSLAMSPD--------------------GRYMASGDEDGTIMMWDLA 577
EC H ++ ++ +P+ G ++ SG D TI MWD++
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 578 SGRCVTPLMGHTSCVWTLAY----RFLLLVT-NAYLKISD-------KVSTGFLFYSLTI 625
+G C+ L+GH + V + + +F++ + L+I D K + ++
Sbjct: 327 TGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSL 386
Query: 626 IYFGCASCEGSLLASGSADCTVKLWD 651
+ A + +GS D TVK+W+
Sbjct: 387 DFHKAA----PYVVTGSVDQTVKVWE 408
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 42/251 (16%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------RKRSYT 415
G L+A +D ++K+WD G +D I PNG R ++
Sbjct: 162 GKLLASCSADMTIKLWDFQSFECIRTMHG----HDHNVSSVAIMPNGDHIISASRDKTMK 217
Query: 416 LYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+++ GH V + G I S S D T+R+W + H +
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEH 277
Query: 465 PVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
V + + P+ G + S S D+T ++W + L + GH
Sbjct: 278 VVECISWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V V +H +I T + DKT+R+WD + C++ H + SL Y+ +
Sbjct: 338 DNWVRGVLFHPGGKFIVTCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDFHKAAPYVVT 397
Query: 565 GDEDGTIMMWD 575
G D T+ +W+
Sbjct: 398 GSVDQTVKVWE 408
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 147/324 (45%), Gaps = 31/324 (9%)
Query: 354 LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK-- 411
L ++++ GS G D + K+WD A G++ + L+G + P G K
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTAS-GEELHT--LEGHRNVVYAIAFNNPYGDKIA 151
Query: 412 ----------------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNAN 455
+ Y ++GH+ + SF+P + + S DTT +LW +
Sbjct: 152 TGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEE 211
Query: 456 LVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI 515
+ GH+ + + FN G+ + S D T +W D + + + GH +++ ++
Sbjct: 212 VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNW 271
Query: 516 NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWD 575
+C+ I TGS DKT +LWD +G+CV GH IL G+ +A+ DGT ++
Sbjct: 272 DCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 576 LASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVSTGFLFYSL---TIIY 627
A+ CVT L GH + +++ R L ++ +I D TG L T
Sbjct: 332 AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD-AQTGQCLQVLEGHTDEI 390
Query: 628 FGCA-SCEGSLLASGSADCTVKLW 650
F CA + +G ++ +GS D T ++W
Sbjct: 391 FSCAFNYKGDIIITGSKDNTCRIW 414
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 133/263 (50%), Gaps = 11/263 (4%)
Query: 414 YTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF-N 472
+ + + H P+ + + + G ++ S D T +LW T L +GH V+ + F N
Sbjct: 85 FKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNN 144
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
P G A+ S D+T ++WS++ + GH +++ C+ ++ +ATGS D T +LW
Sbjct: 145 PYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLW 204
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
D+ SGE V GH + I+SL+ + G + +G D T+ +W+ +GR V L+GH + +
Sbjct: 205 DIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEI 264
Query: 593 WTLAYRF--LLLVTNAY---LKISDKVSTGFLFYSLT----IIYFGCASCEGSLLASGSA 643
+ + + L++T + K+ D V+ G +LT I C G L+A+ SA
Sbjct: 265 SSAVFNWDCSLILTGSMDKTCKLWDAVN-GKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 644 DCTVKLWDVTTSTKVLKTEEKSG 666
D T +++ T V K E G
Sbjct: 324 DGTARIFSAATRECVTKLEGHEG 346
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 18/247 (7%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGE-----NDT 398
++TF + C S + +LVA G D++ K+WD+ + +G E +T
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNT 229
Query: 399 TPREDIIGP-----------NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRL 447
+ I G GRK YTL GH + SA F+ IL+ S D T +L
Sbjct: 230 SGNRIITGSFDHTVTVWEADTGRK-VYTLI-GHCAEISSAVFNWDCSLILTGSMDKTCKL 287
Query: 448 WSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSD 507
W + GH+ + D F+ G A++S D TARI+S + + + GH +
Sbjct: 288 WDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGE 347
Query: 508 VDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDE 567
+ + ++ N + TGSSDKT R+WD +G+C+++ GH I S A + G + +G +
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSK 407
Query: 568 DGTIMMW 574
D T +W
Sbjct: 408 DNTCRIW 414
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Felis catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 58/288 (20%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTI 625
+ RC+ L H V +L + K + V TGF+ ++ +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFH----------KTAPYVVTGFVDQTVKV 406
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TG D+TV++W+
Sbjct: 396 VTGFVDQTVKVWE 408
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSTISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WD++T
Sbjct: 308 GPFLLSGSRDKTIKMWDIST 327
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WD+S+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSTISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------R 410
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 411 KRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +++ GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLR 499
+ H + V + + P+ G + S S D+T ++W + L
Sbjct: 273 REHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLM 332
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH + V V +H +I + + DKT+R+WD + C++ H + SL
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 560 RYMASGDEDGTIMMWD 575
Y+ +G D T+ +W+
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH + D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSIQDIPFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------RKRSYT 415
G L+A +D ++K+WD G + + + + G + I+ PNG R ++
Sbjct: 162 GKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASRDKTIK 217
Query: 416 LYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNY 464
+++ GH V + G I S S D T+R+W + H +
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 465 PVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
V + + P+ G + S S D+T ++W + L + GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V V +H +I + + DKT+R+WD + C++ H + SL Y+ +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT 397
Query: 565 GDEDGTIMMWD 575
G D T+ +W+
Sbjct: 398 GSVDQTVKVWE 408
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 126/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPVGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ +A+ IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESAHPTISE--ATGSENKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WD++T
Sbjct: 308 GPFLLSGSRDKTIKMWDIST 327
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S Q G L+A +D ++K+WD G + + +
Sbjct: 157 SFDQTGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D T+++W + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW-----HINCN-------------- 518
AS S+D+T R+W + + + H V+C+ W H +
Sbjct: 249 LASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPG 308
Query: 519 -YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
++ +GS DKT+++WD+S+G C+ +GH + + + P GR++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLSAHEHFVTSLDF 388
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P S+S D T ++W + R + GH V + + +
Sbjct: 106 GHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D T+ MW++A+G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY 225
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
CV GH W R + +G+LLAS
Sbjct: 226 CVKTFTGHRE--WVRMVR--------------------------------PNQDGTLLAS 251
Query: 641 GSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYS 685
S D TV++W V +TK K E + + + + P + P S
Sbjct: 252 CSNDQTVRVWVV--ATKECKAELREHEHVVECISWAPESAHPTIS 294
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A + + L+ + I
Sbjct: 229 TFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA---TKECKAELREHEHVV---ECI 282
Query: 406 GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
T+ + +G S P G F+LS S D TI++W L+ GH+
Sbjct: 283 SWAPESAHPTISEA-TGSENKKSGKP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNW 340
Query: 466 VWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSS 525
V V F+P G + S + D+T RIW + ++ ++ H V + +H Y+ TGS
Sbjct: 341 VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSV 400
Query: 526 DKTVRLWD 533
D+TV++W+
Sbjct: 401 DQTVKVWE 408
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 26/259 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++++S D TI++W +
Sbjct: 83 GPIGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + LR M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y ISD +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSTISD--ATGSETKR--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVT 653
G L SGS D T+K+WD++
Sbjct: 308 GPFLLSGSRDKTIKMWDIS 326
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WD+S G C+ +GH + + + P G+++ S +D TI +WD
Sbjct: 309 PFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P ++S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
CV GH W R + +G+L+AS
Sbjct: 226 CVKTFTGHRE--WVRMVR--------------------------------PNQDGTLIAS 251
Query: 641 GSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 680
S D TV++W V +TK K E + + + + P S
Sbjct: 252 CSNDQTVRVWVV--ATKECKAELREHEHVVECISWAPESS 289
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W + L+
Sbjct: 280 ECISWAPES---SYSTISDATGSETKRSGKP-GPFLLSGSRDKTIKMWDISIGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V VQF+P G + S + D+T RIW + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 42/256 (16%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------R 410
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECLRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 411 KRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +++ GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLR 499
+ H + V + + P+ G + S S D+T ++W + L
Sbjct: 273 REHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLM 332
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH + V V++H +I + + DKT+R+WD + C++ H + SL
Sbjct: 333 TLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 560 RYMASGDEDGTIMMWD 575
Y+ +G D T+ +W+
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + + DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S++ D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|Q4R8E7|WDR69_MACFA Outer row dynein assembly protein 16 homolog OS=Macaca fascicularis
GN=WDR69 PE=2 SV=1
Length = 415
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 147/321 (45%), Gaps = 31/321 (9%)
Query: 357 ASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK----- 411
++++ GS G D + K+WD A G++ + L+G + P G K
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTAS-GEEL--NTLEGHRNVVYAIAFNNPYGDKTATGS 154
Query: 412 -------------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVC 458
+ Y ++GH+ + SF+P + + S DTT +LW+ + +
Sbjct: 155 FDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQNGEEVCT 214
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+GH+ + + FN G + S D T +W D + I+ GH +++ ++ +C+
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCS 274
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
I TGS DKT LWD ++G+CV GH IL G+ +A+ DGT ++ A+
Sbjct: 275 LILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT 334
Query: 579 GRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVSTGFLFYSL---TIIYFGC 630
+C+ L GH + +++ R L ++ +I D TG L T F C
Sbjct: 335 RKCIAKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD-AQTGQCLQVLEGHTDEIFSC 393
Query: 631 A-SCEGSLLASGSADCTVKLW 650
+ +G+++ +GS D T ++W
Sbjct: 394 TFNYKGNIVITGSKDNTCRIW 414
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 409 GRKRSYTLY-----QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
G+ ++T Y + H P+ + + + G ++ S D T +LW T L +GH
Sbjct: 75 GQHSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHR 134
Query: 464 YPVWDVQF-NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIAT 522
V+ + F NP G A+ S D+T ++WS++ + GH +++ C+ ++ +AT
Sbjct: 135 NVVYAIAFNNPYGDKTATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVAT 194
Query: 523 GSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCV 582
GS D T +LW++ +GE V GH + I+SL+ + G + +G D T+++WD +G V
Sbjct: 195 GSMDTTAKLWNIQNGEEVCTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGGKV 254
Query: 583 TPLMGHTSCVWTLAYRF--LLLVTNAYLKISD--KVSTGFLFYSLT----IIYFGCASCE 634
L+GH + + + + + L++T + K + G +LT I C
Sbjct: 255 NILIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATNGKCVATLTGHDDEILDSCFDYT 314
Query: 635 GSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
G L+A+ SAD T +++ T + K E G
Sbjct: 315 GKLIATASADGTARIFSAATRKCIAKLEGHEG 346
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 16/246 (6%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQ------------AVSSG 391
++TF + C S + +LVA G D++ K+W++ G++ ++S
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWNIQN-GEEVCTLRGHSAEIISLSFN 228
Query: 392 LQGENDTTPRED---IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLW 448
G+ T D ++ + GH + SA F+ IL+ S D T LW
Sbjct: 229 TSGDRIITGSFDHTVVVWDADTGGKVNILIGHCAEISSALFNWDCSLILTGSMDKTCMLW 288
Query: 449 STKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDV 508
+ GH+ + D F+ G A++S D TARI+S + + + GH ++
Sbjct: 289 DATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEI 348
Query: 509 DCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDED 568
+ ++ N + TGSSDKT R+WD +G+C+++ GH I S + G + +G +D
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCTFNYKGNIVITGSKD 408
Query: 569 GTIMMW 574
T +W
Sbjct: 409 NTCRIW 414
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 24/257 (9%)
Query: 414 YTLYQGHSGPVYSASFS-PLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFN 472
+TL +GH VY+ +F+ P GD I++ S D T +LW KGH + + FN
Sbjct: 130 FTL-EGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFN 188
Query: 473 PQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
PQ A+ S D TA++W ++ Q +AGH +++ + ++ + I TGS D RLW
Sbjct: 189 PQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLW 248
Query: 533 DVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCV 592
DV +G+CV + GHR + S + G + SG D T +WD+ SGRC++ GHT V
Sbjct: 249 DVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEV 308
Query: 593 WTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASC---------------EGSL 637
+A+ + + + L+++LT + C +G+
Sbjct: 309 LDVAFD----AAGTKMVSASADGSARLYHTLTGV---CQHTLVGHEGEISKVAFNPQGTR 361
Query: 638 LASGSADCTVKLWDVTT 654
L + S+D T +LWD T
Sbjct: 362 LITASSDKTCRLWDCDT 378
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 38/244 (15%)
Query: 413 SYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
S+TL++ H P+ + +F+ GD ++ S D T ++W+T + +GH V+ +
Sbjct: 83 SFTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAI 142
Query: 470 QF-NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
F NP G + S D+T ++W Q + GH +++ C+ ++ IATGS D T
Sbjct: 143 AFNNPYGDKIVTGSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNT 202
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
+LWDV +G+ GHR+ I+SL + G + +G D +WD+ +G+CV L GH
Sbjct: 203 AKLWDVETGQERATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGH 262
Query: 589 TSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVK 648
V + + + G+L+ SGS DCT +
Sbjct: 263 RGEVSSTQFNY----------------------------------AGTLVVSGSIDCTSR 288
Query: 649 LWDV 652
LWDV
Sbjct: 289 LWDV 292
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 140/329 (42%), Gaps = 32/329 (9%)
Query: 355 NCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRK--- 411
NCA ++ G G D + KVW+ G++ + L+G + P G K
Sbjct: 99 NCA-FNKSGDRFITGSYDRTCKVWNTFT-GEEVFT--LEGHKNVVYAIAFNNPYGDKIVT 154
Query: 412 ---------------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANL 456
+ Y +GH + SF+P I + S D T +LW +
Sbjct: 155 GSFDKTCKLWDAYTGQLYYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQER 214
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
GH + + FN G + S D +R+W + Q + +++GH +V +++
Sbjct: 215 ATLAGHRAEIVSLGFNTGGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYA 274
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+ +GS D T RLWDV SG C+ + GH +L +A G M S DG+ ++
Sbjct: 275 GTLVVSGSIDCTSRLWDVRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHT 334
Query: 577 ASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVSTGFLFYSL---TIIYF 628
+G C L+GH + +A+ R + ++ ++ D TG L T F
Sbjct: 335 LTGVCQHTLVGHEGEISKVAFNPQGTRLITASSDKTCRLWD-CDTGECLQVLEGHTDEIF 393
Query: 629 GCA-SCEGSLLASGSADCTVKLWDVTTST 656
CA + EG + +GS D T ++W T++
Sbjct: 394 SCAFNYEGDFIITGSKDNTCRIWKALTAS 422
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 14/245 (5%)
Query: 344 FYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT---TP 400
+YT + C S + +++A G D++ K+WD+ ++A +G + E +
Sbjct: 172 YYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNT 231
Query: 401 REDIIGPNGRKRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
D+I L+ GH G V S F+ G ++S S D T RLW
Sbjct: 232 GGDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWD 291
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ L +GH V DV F+ G S+S D +AR++ + GH ++
Sbjct: 292 VRSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEIS 351
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
V ++ + T SSDKT RLWD +GEC+++ GH I S A + +G ++ +G +D
Sbjct: 352 KVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDN 411
Query: 570 TIMMW 574
T +W
Sbjct: 412 TCRIW 416
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 393 QGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKL 452
+G+ D PR+ P + GH + + F PL I+S+S D T+R+W
Sbjct: 85 RGKEDALPRQ----PEKH-----VLTGHRNCINAVRFHPLFSVIVSASEDATMRIWDFDS 135
Query: 453 NANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVR 512
KGH V D+ F+ G+ AS S D T ++W ++ + GH +V CVR
Sbjct: 136 GDFERTLKGHTNAVQDIDFDKSGNLLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVR 195
Query: 513 WHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIM 572
+ + + + + S DK++++W+ ++G C + GH + + +S DG +AS D T
Sbjct: 196 FLPSGDQLVSSSRDKSIKVWETATGYCTKTLTGHEDWVRKVIVSEDGTTLASCSNDQTAR 255
Query: 573 MWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCAS 632
+W+LA G C+ H+ V LAY +V +S FG
Sbjct: 256 VWNLAKGECLLTFREHSHVVECLAYSPANIVEVPGSLLSTPEGKAKAKAGAGGTSFG--- 312
Query: 633 CEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLP 677
+ LA+GS D T+K+W++ T + L+T N +RS+K P
Sbjct: 313 -QAGYLATGSRDKTIKIWELATG-RCLQT-YIGHDNWVRSIKFHP 354
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 164/380 (43%), Gaps = 89/380 (23%)
Query: 260 EIDENKKRPVEGGKQGASIKKLKKDKAINATAKTSRLEA--NTVSTAP--RVKPDLALPV 315
E+D K +E K+ S+ +L+K K ++ AK S+LE N P R K D ALP
Sbjct: 38 ELDPKLKGLLE--KKWTSVIRLQK-KVMDLEAKVSQLEEELNNGGRGPARRGKED-ALPR 93
Query: 316 MPTEVEQSILEDLRN-----RVHLSSAALPSVS--------------FYTFINTH-NGLN 355
P E+ +L RN R H + + S S F + H N +
Sbjct: 94 QP---EKHVLTGHRNCINAVRFHPLFSVIVSASEDATMRIWDFDSGDFERTLKGHTNAVQ 150
Query: 356 CASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYT 415
+ G+L+A +D ++K+WD D I T
Sbjct: 151 DIDFDKSGNLLASCSADLTIKLWDFQSF-------------------DCI--------KT 183
Query: 416 LYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQG 475
L+ GH V F P GD ++SSS D +I++W T GH V V + G
Sbjct: 184 LH-GHDHNVSCVRFLPSGDQLVSSSRDKSIKVWETATGYCTKTLTGHEDWVRKVIVSEDG 242
Query: 476 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI-------------------- 515
AS S+D+TAR+W++ + + L H V+C+ +
Sbjct: 243 TTLASCSNDQTARVWNLAKGECLLTFREHSHVVECLAYSPANIVEVPGSLLSTPEGKAKA 302
Query: 516 ----------NCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
Y+ATGS DKT+++W++++G C++ +IGH + + S+ P G+Y+ S
Sbjct: 303 KAGAGGTSFGQAGYLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPCGKYLISV 362
Query: 566 DEDGTIMMWDLASGRCVTPL 585
+D +I +WD+A GRC+ +
Sbjct: 363 GDDKSIRVWDIAQGRCIKTI 382
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 359 ISQDGSLVAGGFSDSSLKVWDMAKLGQQAVS----SGLQGENDTTPREDIIGPNGRKRSY 414
+S+DG+ +A +D + +VW++AK G+ ++ S + +P + P +
Sbjct: 238 VSEDGTTLASCSNDQTARVWNLAK-GECLLTFREHSHVVECLAYSPANIVEVPGSLLSTP 296
Query: 415 TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
SF G ++ + S D TI++W L Y GH+ V ++F+P
Sbjct: 297 EGKAKAKAGAGGTSFGQAG-YLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPC 355
Query: 475 GHYFASSSHDRTARIWSMDRIQPLR-IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLW 532
G Y S D++ R+W + + + ++ I H + C+ + + +IATG D +++W
Sbjct: 356 GKYLISVGDDKSIRVWDIAQGRCIKTINEAHSHFISCLDFCSHNPHIATGGVDDIIKIW 414
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 36/139 (25%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S Q G L A G D ++K+W++A R Y
Sbjct: 310 SFGQAGYL-ATGSRDKTIKIWELAT----------------------------GRCLQTY 340
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK----GHNYPVWDVQFNP 473
GH V S F P G +++S D +IR+W A C K H++ + + F
Sbjct: 341 IGHDNWVRSIKFHPCGKYLISVGDDKSIRVWDI---AQGRCIKTINEAHSHFISCLDFCS 397
Query: 474 QGHYFASSSHDRTARIWSM 492
+ A+ D +IW +
Sbjct: 398 HNPHIATGGVDDIIKIWKL 416
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 149/353 (42%), Gaps = 49/353 (13%)
Query: 347 FINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIG 406
F + + C S + +A G DS L VW M
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMK------------------------- 49
Query: 407 PNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPV 466
P R +T GH V +FSP G + S S D T+R+W + ++ H V
Sbjct: 50 PQSRAYRFT---GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATV 106
Query: 467 WDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSD 526
V F G F ++S D+T ++W+ R + L ++ H++ V C ++ + I + S D
Sbjct: 107 RSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDD 166
Query: 527 KTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLM 586
KTV+LWD SS ECV + H + + P G +A+ D T+ +WD+ + R +
Sbjct: 167 KTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQ 226
Query: 587 GHTSCVWTLAYR-----FLLLVTNAYLKISDKVSTGFLFYSL-------TIIYFGCASCE 634
H++ V L++ + +++ LKI D + G L Y+L T + F S
Sbjct: 227 LHSAAVNGLSFHPSGNYLITASSDSTLKILDLME-GRLLYTLHGHQGPATTVAF---SRT 282
Query: 635 GSLLASGSADCTVKLW----DVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 683
G ASG +D V +W D+ +V K T S+ LP PV
Sbjct: 283 GEYFASGGSDEQVMVWKSNFDIVDHGEVTKVPRPPAT-LASSMGNLPEVDFPV 334
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y F + + C + S G L+A G D ++++W G+ ++V
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 389 SSGLQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I+S+S D T
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKT 168
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + Y H V V F+P G A++ D T ++W + + L+ H
Sbjct: 169 VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T SSD T+++ D+ G + GH+ ++A S G Y AS
Sbjct: 229 SAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 289 GGSDEQVMVW 298
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH V CV + IN +A+GS D + +W + F GH+ + + SP
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDK 613
G +ASG D T+ +W T HT+ V ++ + F+ + +K+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 614 VSTGFLF-YSLTIIYFGCA--SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
FLF S I + CA S +G L+ S S D TVKLWD ++ V E G
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGG 188
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 26/259 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++++S D TI++W +
Sbjct: 83 GPIGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G AS S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N ++I + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y ISD +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSTISD--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVT 653
G L SGS D T+K+WD++
Sbjct: 308 GPFLLSGSRDKTIKMWDIS 326
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S G L+A +D ++K+WD G + + +
Sbjct: 157 SFDHSGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WD+S G C+ +GH + + + P G+++ S +D TI +WD
Sbjct: 309 PFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH PV V F+P ++S D T ++W + R + GH V + + + +
Sbjct: 106 GHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLL 165
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD EC+R GH + S+A+ P+G ++ S D TI MW++ +G
Sbjct: 166 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY 225
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
CV GH W R + +G+L+AS
Sbjct: 226 CVKTFTGHRE--WVRMVR--------------------------------PNQDGTLIAS 251
Query: 641 GSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKS 680
S D TV++W V +TK K E + + + + P S
Sbjct: 252 CSNDQTVRVWVV--ATKECKAELREHEHVVECISWAPESS 289
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W + L+
Sbjct: 280 ECISWAPES---SYSTISDATGSETKKSGKP-GPFLLSGSRDKTIKMWDISIGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V VQF+P G + S + D+T RIW + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
>sp|B5X3Z6|LIS1A_SALSA Lissencephaly-1 homolog A OS=Salmo salar GN=pafah1b1-1 PE=2 SV=1
Length = 410
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 122/260 (46%), Gaps = 30/260 (11%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+E I P + Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 91 PKEWIPRPPEK---YAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL 146
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGH V D+ F+ G AS S D T ++W + +R M GH +V V N ++
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W +AS
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASK 266
Query: 580 RCVTPLMGHTSCVWTL------AYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASC 633
C L H V + A+ +L T + K S K
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILEATGSESKKSGK-------------------- 306
Query: 634 EGSLLASGSADCTVKLWDVT 653
G L SGS D T+K+WDV+
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS 326
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 34/265 (12%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V SF G + S SAD TI+LW + + GH++ V V P G +
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
S+S D+T ++W + ++ GH V VR + + IA+ S+D+TVR+W V+S
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASK 266
Query: 538 ECVRIFIGHRSMILSLAMSPD--------------------GRYMASGDEDGTIMMWDLA 577
EC H ++ ++ +P+ G ++ SG D TI MWD++
Sbjct: 267 ECKAELREHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVS 326
Query: 578 SGRCVTPLMGHTSCVWTLAY----RFLL-LVTNAYLKISD------KVSTGFLFYSLTII 626
G C+ L+GH + V + +F+L + L+I D + G + +T +
Sbjct: 327 IGMCLMTLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCMKTLGAHEHFVTSL 386
Query: 627 YFGCASCEGSLLASGSADCTVKLWD 651
F + +GS D TVK+W+
Sbjct: 387 DF---HKNAPYVVTGSVDQTVKVWE 408
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------R 410
S G L+A +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHTGKLLASCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHIVSASR 212
Query: 411 KRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +++ GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVASKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLR 499
+ H + V + + P+ G + S S D+T ++W + L
Sbjct: 273 REHEHVVECISWAPESAHPTILEATGSESKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLM 332
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH + V + H +I + + DKT+R+WD + C++ H + SL +
Sbjct: 333 TLVGHDNWVRGMLVHPGGKFILSCADDKTLRIWDYKNKRCMKTLGAHEHFVTSLDFHKNA 392
Query: 560 RYMASGDEDGTIMMWD 575
Y+ +G D T+ +W+
Sbjct: 393 PYVVTGSVDQTVKVWE 408
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S V V +H + + + S D T+++WD +G+ R GH + ++ G+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDKVS 615
+AS D TI +WD C+ + GH V ++A + + +K+ + V+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE-VA 222
Query: 616 TGFLFYSLT----IIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLR 671
TG+ + T + + +G+L+AS S D TV++W V ++K K E + + +
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV--ASKECKAELREHEHVVE 280
Query: 672 SLKTLPTKSTPVYSLQFSRRNLLFAAGALSKTS 704
+ P + P +L A G+ SK S
Sbjct: 281 CISWAPESAHP---------TILEATGSESKKS 304
>sp|B5X3C4|LIS1B_SALSA Lissencephaly-1 homolog B OS=Salmo salar GN=pafah1b1-2 PE=2 SV=1
Length = 410
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 30/261 (11%)
Query: 400 PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
P+E I P R Y L GH PV F P+ +++SS D TI++W +
Sbjct: 91 PKEWIPRPPER---YAL-SGHRSPVTRVIFHPVFSVMVTSSEDATIKVWDYEAGDFERTL 146
Query: 460 KGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY 519
KGH V D+ F+ G AS S D T ++W + +R M GH +V V N ++
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 520 IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
I + S DKT+++W+V++G CV+ F GHR + + + DG +AS D T+ +W S
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSLIASCSNDQTVRVWVATSK 266
Query: 580 RCVTPLMGHTSCVWTLAYR------FLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASC 633
C L H V +A+ +L T++ K + K
Sbjct: 267 ECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGK-------------------- 306
Query: 634 EGSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WD++T
Sbjct: 307 SGPFLLSGSRDKTIKMWDIST 327
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 48/258 (18%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLY 417
S Q G L+A +D ++K+WD G + + +
Sbjct: 157 SFDQTGKLLASCSADMTIKLWDFQ--GFECIRT--------------------------M 188
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD I+S+S D TI++W + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGSL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN------------------- 518
AS S+D+T R+W + + H V+C+ W +
Sbjct: 249 IASCSNDQTVRVWVATSKECKAELREHEHVVECIAWAPDTAHPTILEATSSESKKNGKSG 308
Query: 519 -YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
++ +GS DKT+++WD+S+G C+ +GH + + + + P GR++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTL 595
+ RC+ L H V +L
Sbjct: 369 NKRCMKTLCAHEHFVTSL 386
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 32/200 (16%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDGSL+A +D +++VW V++ + + + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGSLIASCSNDQTVRVW---------VATSKECKAELREHEHVV 279
Query: 406 -----GPNGRK-------RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLN 453
P+ S + G SGP F+LS S D TI++W
Sbjct: 280 ECIAWAPDTAHPTILEATSSESKKNGKSGP-----------FLLSGSRDKTIKMWDISTG 328
Query: 454 ANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW 513
L+ GH+ V V +P G + S + D+T RIW + ++ + H V +
Sbjct: 329 MCLMTLVGHDNWVRGVLVHPGGRFIVSCADDKTLRIWDYKNKRCMKTLCAHEHFVTSLDM 388
Query: 514 HINCNYIATGSSDKTVRLWD 533
H Y+ TGS D+TV++W+
Sbjct: 389 HQTAPYVVTGSVDQTVKVWE 408
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 163/385 (42%), Gaps = 76/385 (19%)
Query: 249 SEKAEGENKEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAP- 305
S E KEA+I +R + G K+ S+ +L+K K + AK S E + AP
Sbjct: 27 SSALEAFRKEADISGEAERKIVGLLEKKWTSVIRLQK-KVMELEAKLSEAEKEVIEGAPS 85
Query: 306 RVK--PDLALPVMPTEVEQSILEDLRNRV--------HLSSAALPSVSFYTF-------- 347
R K P +P P + S RV LS++ + + F
Sbjct: 86 RAKRSPGEWIPRPPEKFSLSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERS 145
Query: 348 INTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIG 406
+ H + + + G L+A +D S+K+WD
Sbjct: 146 LKGHTSSVQDIAFDSQGKLLASCSADLSIKLWDF-------------------------- 179
Query: 407 PNGRKRSYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
++SY + GH V S +F P GD++LS+S D TI++W + Y GH
Sbjct: 180 ----QQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYSGHR 235
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW-------HIN 516
+ V+ + G+ FAS S D + RIWS++ + H V+C+ W HIN
Sbjct: 236 EWIRMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVECIAWAPDISTTHIN 295
Query: 517 -------------CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMA 563
++A+GS DKT+R+WDV G C+ + GH + + L P G+Y+
Sbjct: 296 EAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLV 355
Query: 564 SGDEDGTIMMWDLASGRCVTPLMGH 588
S +D TI +WDL + R + L H
Sbjct: 356 SASDDKTIRVWDLRNKRFMKTLYAH 380
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 15/235 (6%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH + F P +LS+S D I++W + KGH V D+ F+ QG
Sbjct: 106 GHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQGKLL 165
Query: 479 ASSSHDRTARIWSMDR-IQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
AS S D + ++W + ++ M GH +V V + +Y+ + S D+T+++W+V++G
Sbjct: 166 ASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATG 225
Query: 538 ECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY 597
CV+ + GHR I + + DG AS D +I +W + S C L H V +A+
Sbjct: 226 YCVKTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVECIAW 285
Query: 598 RFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDV 652
+ T+ G +G LASGS D T+++WDV
Sbjct: 286 APDISTTHINEAAGSDNKKGHH--------------QGPFLASGSRDKTIRVWDV 326
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 24/196 (12%)
Query: 348 INTHNG----LNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTT---- 399
+ T++G + + DG++ A D S+++W + + + L+ + T
Sbjct: 228 VKTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIW---SINSRDCKAELRAHDHTVECIA 284
Query: 400 --PREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLV 457
P N S H GP F+ S S D TIR+W + L
Sbjct: 285 WAPDISTTHINEAAGSDNKKGHHQGP-----------FLASGSRDKTIRVWDVGVGLCLF 333
Query: 458 CYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINC 517
GH+ V ++ F+P G Y S+S D+T R+W + + ++ + H V +H
Sbjct: 334 VLTGHDNWVRELTFHPGGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQHFCTSVDFHKKL 393
Query: 518 NYIATGSSDKTVRLWD 533
Y+ +GS D TV++W+
Sbjct: 394 PYVISGSVDNTVKVWE 409
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH + + V +H + + + S D +++WD +GE R GH S + +A G+
Sbjct: 104 LSGHRASITRVIFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDSQGK 163
Query: 561 YMASGDEDGTIMMWDL-ASGRCVTPLMGHTSCVWTLAY----RFLLLVTNAYLKISDKVS 615
+AS D +I +WD S CV ++GH V ++A+ ++L + +V+
Sbjct: 164 LLASCSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVA 223
Query: 616 TGFLFYSLT----IIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLR 671
TG+ + + I +G++ AS S D ++++W + +++ K E ++ + +
Sbjct: 224 TGYCVKTYSGHREWIRMVRVHMDGNIFASCSIDHSIRIWSI--NSRDCKAELRAHDHTVE 281
Query: 672 SLKTLPTKST 681
+ P ST
Sbjct: 282 CIAWAPDIST 291
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 22/284 (7%)
Query: 410 RKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDV 469
+ R+Y + GH V +FSP G + S S D T+R+W + ++ H V V
Sbjct: 51 QTRAYR-FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 470 QFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTV 529
F G F ++S D+T ++WS R + L ++ H++ V C ++ + I + S DKTV
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTV 169
Query: 530 RLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHT 589
+LWD +S ECV + H + + P G +A+ D T+ +WD+ + R + H+
Sbjct: 170 KLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 590 SCVWTLAYR-----FLLLVTNAYLKISDKVSTGFLFYSL-------TIIYFGCASCEGSL 637
+ V L++ + +++ LKI D + G L Y+L T + F S G
Sbjct: 230 AAVNALSFHPSGNYLVTASSDSTLKILDLME-GRLLYTLHGHQGPATTVAF---SRTGEY 285
Query: 638 LASGSADCTVKLW----DVTTSTKVLKTEEKSGTNRLRSLKTLP 677
ASG +D V +W D+ +VL+ + T R S TLP
Sbjct: 286 FASGGSDEQVMVWKSNFDIVDYGEVLRVQRPPAT-RASSSGTLP 328
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 340 PSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ-----------QAV 388
P Y F + + C + S G L+A G D ++++W G+ ++V
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 389 SSGLQGENDTTPRED----IIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTT 444
G++ T +D + + +K ++L Q H V A FSP G I+S+S D T
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKT 168
Query: 445 IRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGH 504
++LW + Y H V V F+P G A++ D T ++W + + L+ H
Sbjct: 169 VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Query: 505 LSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMAS 564
+ V+ + +H + NY+ T SSD T+++ D+ G + GH+ ++A S G Y AS
Sbjct: 229 SAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 565 GDEDGTIMMW 574
G D +M+W
Sbjct: 289 GGSDEQVMVW 298
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 8/176 (4%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH V V + +N +A+GS D + +W + F GH+ + + SP
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDK 613
G +ASG D T+ +W T HT+ V ++ + F+ + +K+
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 614 VSTGFLF-YSLTIIYFGCA--SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 666
FLF S I + CA S +G L+ S S D TVKLWD T+ V E G
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 17/251 (6%)
Query: 412 RSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQF 471
R+Y + GH + S FSP G I S+S D T+RLW + +K H V V F
Sbjct: 52 RAYR-FVGHKDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSF 110
Query: 472 NPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRL 531
+ G ++S D+T ++W++ R + L + H++ V C ++ + I + S DKT++L
Sbjct: 111 SGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKL 170
Query: 532 WDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSC 591
WD +S EC++ F H + + P G +A+ D T+ +WD+ + + H+
Sbjct: 171 WDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGV 230
Query: 592 VWTLAYR----FLLLVTN-AYLKISDKVSTGFLFYSL-------TIIYFGCASCEGSLLA 639
V +L++ +L+ +N + LK+ D + G L Y+L T + F S EG A
Sbjct: 231 VNSLSFHPSGNYLITASNDSTLKVLDLLE-GRLLYTLHGHQGPVTCVKF---SREGDFFA 286
Query: 640 SGSADCTVKLW 650
SG +D V +W
Sbjct: 287 SGGSDEQVMVW 297
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 366 VAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDT------TPREDIIGPNGRKRSY----- 414
+A G DS L VW+M Q + G D +P +I R ++
Sbjct: 33 LASGSMDSCLMVWNMKT---QMRAYRFVGHKDAILSVDFSPSGHLIASASRDKTVRLWVP 89
Query: 415 ------TLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWD 468
T ++ H+G V S SFS G ++++S D TI++W+ L H V
Sbjct: 90 SVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRC 149
Query: 469 VQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKT 528
+F+P G S+S D+T ++W + ++ H V+ V +H + IA ++D T
Sbjct: 150 AKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAATDNT 209
Query: 529 VRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGH 588
V++WD+ + ++ + H ++ SL+ P G Y+ + D T+ + DL GR + L GH
Sbjct: 210 VKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGH 269
Query: 589 ---TSCV 592
+CV
Sbjct: 270 QGPVTCV 276
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 29/190 (15%)
Query: 344 FYTFINTH-NGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPRE 402
F +N H N + CA S DG L+ D ++K+WD K ++ + S
Sbjct: 136 FLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWD--KTSRECIQS------------ 181
Query: 403 DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGH 462
+ H G V F P G I +++ D T+++W ++N + Y+ H
Sbjct: 182 --------------FCEHGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVH 227
Query: 463 NYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIAT 522
+ V + F+P G+Y ++S+D T ++ + + L + GH V CV++ ++ A+
Sbjct: 228 SGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFAS 287
Query: 523 GSSDKTVRLW 532
G SD+ V +W
Sbjct: 288 GGSDEQVMVW 297
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 113/279 (40%), Gaps = 41/279 (14%)
Query: 459 YKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCN 518
+KGH V V FN AS S D +W+M GH + V + + +
Sbjct: 14 FKGHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPSGH 73
Query: 519 YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLAS 578
IA+ S DKTVRLW S F H + S++ S DG+ + + +D TI +W +
Sbjct: 74 LIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHR 133
Query: 579 GRCVTPLMGHTSCVWTLAYRF----LLLVT---NAYLKISDKVS----TGFLFYSLTIIY 627
+ + L H + W +F L+V+ + +K+ DK S F + +
Sbjct: 134 QKFLFSLNQHIN--WVRCAKFSPDGRLIVSASDDKTIKLWDKTSRECIQSFCEHG-GFVN 190
Query: 628 FGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG-TNRL---------------- 670
F G+ +A+ + D TVK+WD+ + + + SG N L
Sbjct: 191 FVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDS 250
Query: 671 ----------RSLKTLPTKSTPVYSLQFSRRNLLFAAGA 699
R L TL PV ++FSR FA+G
Sbjct: 251 TLKVLDLLEGRLLYTLHGHQGPVTCVKFSREGDFFASGG 289
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 499 RIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPD 558
R GH V V ++ N +A+GS D + +W++ + F+GH+ ILS+ SP
Sbjct: 12 RHFKGHRDTVTAVDFNANTKQLASGSMDSCLMVWNMKTQMRAYRFVGHKDAILSVDFSPS 71
Query: 559 GRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-----RFLLLVTNAYLKISDK 613
G +AS D T+ +W + T HT V ++++ + + +K+
Sbjct: 72 GHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTV 131
Query: 614 VSTGFLF-YSLTIIYFGCA--SCEGSLLASGSADCTVKLWDVTT 654
FLF + I + CA S +G L+ S S D T+KLWD T+
Sbjct: 132 HRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTS 175
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 351 HNG-LNCASISQDGSLVAGGFSDSSLKVWD--MAKLGQQ-AVSSG--------------L 392
H G +N G+ +A +D+++KVWD M KL Q V SG +
Sbjct: 185 HGGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLI 244
Query: 393 QGENDTTPRE-DIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTK 451
ND+T + D++ GR YTL+ GH GPV FS GDF S +D + +W T
Sbjct: 245 TASNDSTLKVLDLL--EGRLL-YTLH-GHQGPVTCVKFSREGDFFASGGSDEQVMVWKTN 300
Query: 452 LNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLR 499
+A +YP D+ Q F S D T+ + D QP R
Sbjct: 301 FDAG-------SYP--DLLKYRQNDTFPSGG-DYTSIVQPADVHQPAR 338
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 14/237 (5%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH P+ F P+ + ++SSS D ++++W + +GH V D+ F+ G
Sbjct: 105 GHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGKLL 164
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
ASSS D T +IW + + GH +V V + + +++ + S DKT+++W+V++G
Sbjct: 165 ASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVATGY 224
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR 598
CV F GHR + +A++ DG MAS D T+ +W L+S C L GH V + +
Sbjct: 225 CVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHVVECI--K 282
Query: 599 FLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTS 655
+ N Y+ + S T + G S G LASGS D +K+WDVTT+
Sbjct: 283 WAPESCNRYINEA----------SGTEVPKGQKS--GPFLASGSRDRVIKIWDVTTA 327
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH V S F P GDF+LSSS D TI++W + ++GH V V G
Sbjct: 188 RGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSL 247
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHI-NCN------------------ 518
AS S+D+T RIWS+ + + GH V+C++W +CN
Sbjct: 248 MASCSNDQTVRIWSLSSKECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSG 307
Query: 519 -YIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
++A+GS D+ +++WDV++ C+ +GH + + LA G+Y+ S +D TI +W+L
Sbjct: 308 PFLASGSRDRVIKIWDVTTAVCLFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELR 367
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
RC L H V T+ +
Sbjct: 368 HKRCSKSLEAHNHFVTTIDF 387
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 34/265 (12%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
+GH+ V +F G + SSSAD T+++W + + +GH++ V V F P G +
Sbjct: 146 RGHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDF 205
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSG 537
SSS D+T ++W + + GH V V + + +A+ S+D+TVR+W +SS
Sbjct: 206 LLSSSRDKTIKMWEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSK 265
Query: 538 ECVRIFIGHRSMILSLAMSPD--------------------GRYMASGDEDGTIMMWDLA 577
EC GH ++ + +P+ G ++ASG D I +WD+
Sbjct: 266 ECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVT 325
Query: 578 SGRCVTPLMGHTSCVWTLAY----RFLLLVT-NAYLKISD----KVSTGFLFYS--LTII 626
+ C+ L+GH + V LA+ ++L + + +KI + + S ++ +T I
Sbjct: 326 TAVCLFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTI 385
Query: 627 YFGCASCEGSLLASGSADCTVKLWD 651
F +S + +GS D T+K+W+
Sbjct: 386 DFHRSS---PFVITGSVDLTIKVWE 407
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 501 MAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGR 560
++GH S + CV +H N + + S D ++++WD SG+ R GH + LA G+
Sbjct: 103 LSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGK 162
Query: 561 YMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY----RFLLLVTNAYLKISDKVST 616
+AS D T+ +WD + C L GH V ++ + FLL + +V+T
Sbjct: 163 LLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVAT 222
Query: 617 GFLFYSL----TIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRS 672
G+ Y+ + + +GSL+AS S D TV++W + S+K K E + + +
Sbjct: 223 GYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSL--SSKECKEELRGHEHVVEC 280
Query: 673 LKTLP 677
+K P
Sbjct: 281 IKWAP 285
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 40/250 (16%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTT------PREDIIGPNGRKRS--- 413
G L+A +D ++K+WD + L+G + P D + + R ++
Sbjct: 161 GKLLASSSADMTVKIWDFQTFECRMT---LRGHDHNVSSVCFLPSGDFLLSSSRDKTIKM 217
Query: 414 ------YTLY--QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYP 465
Y +Y +GH V + + G + S S D T+R+WS +GH +
Sbjct: 218 WEVATGYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHV 277
Query: 466 VWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLRIMAGHL 505
V +++ P+ G + AS S DR +IW + L + GH
Sbjct: 278 VECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVGHD 337
Query: 506 SDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASG 565
+ V + +H Y+ + S DKT+++W++ C + H + ++ ++ +G
Sbjct: 338 NWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFHRSSPFVITG 397
Query: 566 DEDGTIMMWD 575
D TI +W+
Sbjct: 398 SVDLTIKVWE 407
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 10/190 (5%)
Query: 345 YTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDI 404
Y F + +++ DGSL+A +D ++++W L + L+G E I
Sbjct: 227 YNFEGHREWVRRVAVASDGSLMASCSNDQTVRIW---SLSSKECKEELRGHEHVV--ECI 281
Query: 405 -IGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHN 463
P R G P S G F+ S S D I++W L GH+
Sbjct: 282 KWAPESCNRYINEASGTEVPKGQKS----GPFLASGSRDRVIKIWDVTTAVCLFSLVGHD 337
Query: 464 YPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATG 523
V + F+ G Y S+S D+T +IW + + + + H V + +H + ++ TG
Sbjct: 338 NWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFHRSSPFVITG 397
Query: 524 SSDKTVRLWD 533
S D T+++W+
Sbjct: 398 SVDLTIKVWE 407
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 15/141 (10%)
Query: 326 EDLRNRVHLSSA-ALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAK-- 382
E+LR H+ S +IN +G + G +A G D +K+WD+
Sbjct: 269 EELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAV 328
Query: 383 -----LGQQAVSSGLQ----GENDTTPREDI---IGPNGRKRSYTLYQGHSGPVYSASFS 430
+G GL G+ T+ +D I KR + H+ V + F
Sbjct: 329 CLFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFH 388
Query: 431 PLGDFILSSSADTTIRLWSTK 451
F+++ S D TI++W +
Sbjct: 389 RSSPFVITGSVDLTIKVWECR 409
>sp|B7PS00|LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes scapularis GN=IscW_ISCW007420
PE=3 SV=2
Length = 411
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 15/265 (5%)
Query: 390 SGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWS 449
SG +P E I P +RS L GH P+ F P+ ++S+S D +I++W
Sbjct: 79 SGTPSREKRSPTEWI--PRPPERSALL--GHRAPITRVLFHPVYSVVVSASEDASIKVWD 134
Query: 450 TKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVD 509
+ KGH V D+ F+ G + AS S D T ++W + LR M GH +V
Sbjct: 135 YETGDFERTIKGHTDSVQDIAFDHTGQFLASCSADMTIKLWDFKSYECLRTMHGHDHNVS 194
Query: 510 CVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDG 569
V + + +++ + S DK++++W+V++G CVR F GHR + + ++ DG +AS D
Sbjct: 195 SVCFLPSGDHVVSCSRDKSIKMWEVATGYCVRTFTGHRDWVRMVRVNSDGSLLASCSNDQ 254
Query: 570 TIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFG 629
T+ +W + + C L H V +A+ A+ ++ G S G
Sbjct: 255 TVRVWVVGTKECKLELREHDHVVECVAW------APAHAQL-----CGAAGDSNRRPGAG 303
Query: 630 CASCEGSLLASGSADCTVKLWDVTT 654
A G L SGS D T+K+WDV+T
Sbjct: 304 GAQGTGPFLVSGSRDKTIKVWDVST 328
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 180/460 (39%), Gaps = 101/460 (21%)
Query: 232 LEDSLENRLEKTGLISDSEKAEGENKEAEI--DENKKRPVEGGKQGASIKKLKKDKAINA 289
L ++ + L G + E E KE ++ D +KK K+ S+ +L+K K ++
Sbjct: 11 LNKAIADYLASNGFM---EALESFKKETDMPGDIDKKYAGLLEKKWTSVIRLQK-KVMDL 66
Query: 290 TAKTSRLEANTVSTAPRVKPDLALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFIN 349
+ + E +S P + +P E+S L R A + V F+
Sbjct: 67 EGRLAEAEKEYISGTPSREKRSPTEWIPRPPERSALLGHR-------APITRVLFHPVY- 118
Query: 350 THNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQ------------QAVSSGLQGEND 397
S+V D+S+KVWD + G Q ++ G+
Sbjct: 119 --------------SVVVSASEDASIKVWDY-ETGDFERTIKGHTDSVQDIAFDHTGQFL 163
Query: 398 TTPREDIIGPNGRKRSYTLYQ---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
+ D+ +SY + GH V S F P GD ++S S D +I++W
Sbjct: 164 ASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGY 223
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRW- 513
+ + GH V V+ N G AS S+D+T R+W + + + H V+CV W
Sbjct: 224 CVRTFTGHRDWVRMVRVNSDGSLLASCSNDQTVRVWVVGTKECKLELREHDHVVECVAWA 283
Query: 514 --HIN-CN-------------------YIATGSSDKTVRLWDVSSGECVRIFIGHRSMIL 551
H C ++ +GS DKT+++WDVS+G + +GH + +
Sbjct: 284 PAHAQLCGAAGDSNRRPGAGGAQGTGPFLVSGSRDKTIKVWDVSTGLALFTLVGHDNWVR 343
Query: 552 SLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKIS 611
+ P G+Y+ S +D T+ +W+LA RC L H+ +L + T Y+
Sbjct: 344 GVKFHPGGKYLLSASDDKTLRVWELAHQRCCKTLDAHSHFCTSLDFHR----TAPYV--- 396
Query: 612 DKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWD 651
+GS D TVK+W+
Sbjct: 397 ---------------------------VTGSVDQTVKVWE 409
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH P+ V F+P S+S D + ++W + R + GH V + + ++
Sbjct: 104 GHRAPITRVLFHPVYSVVVSASEDASIKVWDYETGDFERTIKGHTDSVQDIAFDHTGQFL 163
Query: 521 ATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGR 580
A+ S+D T++LWD S EC+R GH + S+ P G ++ S D +I MW++A+G
Sbjct: 164 ASCSADMTIKLWDFKSYECLRTMHGHDHNVSSVCFLPSGDHVVSCSRDKSIKMWEVATGY 223
Query: 581 CVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLAS 640
CV GH W R + +GSLLAS
Sbjct: 224 CVRTFTGHRD--WVRMVR--------------------------------VNSDGSLLAS 249
Query: 641 GSADCTVKLWDVTTSTKVLKTEE 663
S D TV++W V T L+ E
Sbjct: 250 CSNDQTVRVWVVGTKECKLELRE 272
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 152/300 (50%), Gaps = 30/300 (10%)
Query: 401 REDIIGPNGRKRSY---TLYQGHSGPVYSA-SFSPLGDFILSSSADTTIRLWSTKLNANL 456
R+ II N R R + +GH V + FS G+ I+S S D T+++WS L
Sbjct: 971 RQHIIEMNWRSRPVRKPKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCL 1028
Query: 457 VCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHIN 516
GH VW Q + G+ S S DRT ++W MD + + GH S V C+ H++
Sbjct: 1029 RTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCM--HLH 1084
Query: 517 CNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDL 576
+ + +GS D T+R+WD+ G C+ + +GH + + + DG+ + SG D + +W
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHP 1142
Query: 577 ASGRCVTPLMGHTSCVWTLAYRFLLLVTNAY---LKISDKVSTGFLFYSLTIIYFGCASC 633
C+ L GHT+ V++L + L +V+ + +++ D V TG ++L +
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWD-VETGNCKHTLMGHQSLTSGM 1201
Query: 634 E--GSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRR 691
E ++L SG+AD TVK+WD+TT + L+T SG N+ S V LQF+ R
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTG-QCLQT--LSGPNKHHSA---------VTCLQFNSR 1249
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 419 GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYF 478
GH+G V+S+ S G+ I+S S D T+++W A + +GH V + + G
Sbjct: 1033 GHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLH--GSKV 1088
Query: 479 ASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGE 538
S S D T R+W +++ L ++ GHL+ V CV++ + I +G+ D V++W E
Sbjct: 1089 VSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQE 1146
Query: 539 CVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYR 598
C+ GH + + SL DG ++ SG D +I +WD+ +G C LMGH S + R
Sbjct: 1147 CLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR 1204
Query: 599 FLLLVT---NAYLKISDKVSTGFLFYSLTII-----YFGCASCEGSLLASGSADCTVKLW 650
+LV+ ++ +K+ D ++TG +L+ C + + S D TVKLW
Sbjct: 1205 QNILVSGNADSTVKVWD-ITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLW 1263
Query: 651 DVTT 654
DV T
Sbjct: 1264 DVKT 1267
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 43/273 (15%)
Query: 363 GSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSG 422
G+++ G +D +LKVWDM A LQG T R L+
Sbjct: 1045 GNIIISGSTDRTLKVWDM---DSGACVHTLQGHTSTV------------RCMHLH----- 1084
Query: 423 PVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSS 482
G ++S S D T+R+W + + L GH V VQ++ G S +
Sbjct: 1085 ----------GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGA 1132
Query: 483 HDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRI 542
+D +IW +R + L + GH + V +++ + ++ +GS D ++R+WDV +G C
Sbjct: 1133 YDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHT 1190
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMG---HTSCVWTLAYRF 599
+GH+S+ + + + + SG+ D T+ +WD+ +G+C+ L G H S V L +
Sbjct: 1191 LMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS 1248
Query: 600 LLLVT---NAYLKISDKVSTGFLFYSLTIIYFG 629
+VT + +K+ D V TG +L + G
Sbjct: 1249 RFVVTSSDDGTVKLWD-VKTGDFIRNLVALDSG 1280
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 113/248 (45%), Gaps = 37/248 (14%)
Query: 363 GSLVAGGFSDSSLKVWDMAK-------LGQQAVSSGLQ--------GENDTTPREDIIGP 407
GS V G D++L+VWD+ + +G A +Q G D + I P
Sbjct: 1085 GSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVK--IWHP 1142
Query: 408 NGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVW 467
++ +TL QGH+ VYS F L ++S S DT+IR+W + GH
Sbjct: 1143 ERQECLHTL-QGHTNRVYSLQFDGL--HVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS 1199
Query: 468 DVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAG---HLSDVDCVRWHINCNYIATGS 524
++ + + S + D T ++W + Q L+ ++G H S V C+++ N ++ T S
Sbjct: 1200 GMEL--RQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQF--NSRFVVTSS 1255
Query: 525 SDKTVRLWDVSSGECVRIFI-----GHRSMILSLAMSPDGRYMASGDEDGT----IMMWD 575
D TV+LWDV +G+ +R + G ++ + + A G +GT +M+ D
Sbjct: 1256 DDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLD 1315
Query: 576 L-ASGRCV 582
G CV
Sbjct: 1316 FDVEGACV 1323
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 26/260 (10%)
Query: 406 GPNGRKR-----------SYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNA 454
GP G+KR Y L GH PV F P+ ++S+S D TI++W +
Sbjct: 83 GPLGQKRDPKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD 141
Query: 455 NLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWH 514
KGH V D+ F+ G S S D T ++W + +R M GH +V V
Sbjct: 142 FERTLKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIM 201
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
N +++ + S DKT+++W+V +G CV+ F GHR + + + DG +AS D T+ +W
Sbjct: 202 PNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 575 DLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCE 634
+A+ C L H V +++ ++Y IS+ +TG +
Sbjct: 262 VVATKECKAELREHEHVVECISW----APESSYSSISE--ATGSETKK--------SGKP 307
Query: 635 GSLLASGSADCTVKLWDVTT 654
G L SGS D T+K+WDV+T
Sbjct: 308 GPFLLSGSRDKTIKMWDVST 327
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 418 QGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHY 477
GH V S + P GD ++S+S D TI++W + + + GH V V+ N G
Sbjct: 189 HGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 478 FASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNY------------------ 519
AS S+D+T R+W + + + H V+C+ W +Y
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPG 308
Query: 520 --IATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLA 577
+ +GS DKT+++WDVS+G C+ +GH + + + G+++ S +D T+ +WD
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 578 SGRCVTPLMGHTSCVWTLAY 597
+ RC+ L H V +L +
Sbjct: 369 NKRCMKTLNAHEHFVTSLDF 388
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 346 TFINTHNGLNCASISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDII 405
TF + +QDG+L+A +D +++VW +A +A + E ++
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA---------ELREHEHVV 279
Query: 406 -----GPNGRKRSYTLYQGHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYK 460
P SY+ +G S P G F+LS S D TI++W L+
Sbjct: 280 ECISWAPES---SYSSISEATGSETKKSGKP-GPFLLSGSRDKTIKMWDVSTGMCLMTLV 335
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH+ V V F+ G + S + D+T R+W + ++ + H V + +H Y+
Sbjct: 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 521 ATGSSDKTVRLWD 533
TGS D+TV++W+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 42/256 (16%)
Query: 358 SISQDGSLVAGGFSDSSLKVWDMAKLGQQAVSSGLQGENDTTPREDIIGPNG-------R 410
S G L+ +D ++K+WD G + + + + G + I+ PNG R
Sbjct: 157 SFDHSGKLLTSCSADMTIKLWDFQ--GFECIRT-MHGHDHNVSSVAIM-PNGDHLVSASR 212
Query: 411 KRSYTLYQ-----------GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCY 459
++ +++ GH V + G I S S D T+R+W
Sbjct: 213 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272
Query: 460 KGHNYPVWDVQFNPQ--------------------GHYFASSSHDRTARIWSMDRIQPLR 499
+ H + V + + P+ G + S S D+T ++W + L
Sbjct: 273 REHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332
Query: 500 IMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDG 559
+ GH + V V +H +I + + DKT+R+WD + C++ H + SL
Sbjct: 333 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 392
Query: 560 RYMASGDEDGTIMMWD 575
Y+ +G D T+ +W+
Sbjct: 393 PYVVTGSVDQTVKVWE 408
>sp|Q291L9|LIS1_DROPS Lissencephaly-1 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=Lis-1 PE=3 SV=1
Length = 411
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 70/374 (18%)
Query: 257 KEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALP 314
KEA++ ++ G K+ S+ +L+K K + AK + E + AP
Sbjct: 35 KEADVSTESEKKFGGLLEKKWTSVIRLQK-KVMELEAKLTEAEKEVIEGAPTKNKRTPGE 93
Query: 315 VMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSS 374
+P E+ L R A++ V F+ L+ D++
Sbjct: 94 WIPRPPEKYSLTGHR-------ASITRVIFHPIFG---------------LMVSASEDAT 131
Query: 375 LKVWDMAKLGQQAVSSGLQGENDTTPREDI-IGPNGR----------------KRSYTLY 417
+K+WD + G+ S L+G D+ +D+ G+ ++SY
Sbjct: 132 IKIWDF-ETGEYERS--LKGHTDSV--QDVAFDSQGKLLASCSADLSIKLWDFQQSYECV 186
Query: 418 Q---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
+ GH V S +F P GD++LS+S D TI++W + Y GH V V+ + +
Sbjct: 187 KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV--------------------RWH 514
G FA+ S+D T R+W M+ + H V+C+ + H
Sbjct: 247 GSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGH 306
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++A+GS DKT+R+WDVS G C+ GH + + LA P G+Y+ S +D TI +W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 575 DLASGRCVTPLMGH 588
DL + RC+ L H
Sbjct: 367 DLRNKRCMKTLYAH 380
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 381 AKL--GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
AKL ++ V G +N TP E I P Y+L GH + F P+ ++S
Sbjct: 70 AKLTEAEKEVIEGAPTKNKRTPGEWIPRP---PEKYSL-TGHRASITRVIFHPIFGLMVS 125
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR-IQP 497
+S D TI++W + KGH V DV F+ QG AS S D + ++W + +
Sbjct: 126 ASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQSYEC 185
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++ M GH +V V + +Y+ + S D+T+++W+V++G CV+ + GHR + + +
Sbjct: 186 VKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTG 617
+G A+ D TI +W + S C L H V +A+ + G
Sbjct: 246 EGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 618 FLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVL 659
+G LASGS D T+++WDV+ +L
Sbjct: 306 HH--------------QGPFLASGSRDKTIRIWDVSVGLCLL 333
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G F+ S S D TIR+W + L+ GH+ V + F+P G Y S+S D+T R+W +
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ ++ + H + +H Y+ +GS D+TV++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 34/119 (28%)
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLL 602
GHR+ I + P M S ED TI +WD +G L GHT V +A+
Sbjct: 104 LTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF----- 158
Query: 603 VTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKT 661
+G LLAS SAD ++KLWD S + +KT
Sbjct: 159 -----------------------------DSQGKLLASCSADLSIKLWDFQQSYECVKT 188
>sp|B4GAJ1|LIS1_DROPE Lissencephaly-1 homolog OS=Drosophila persimilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 70/374 (18%)
Query: 257 KEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPDLALP 314
KEA++ ++ G K+ S+ +L+K K + AK + E + AP
Sbjct: 35 KEADVSTESEKKFGGLLEKKWTSVIRLQK-KVMELEAKLTEAEKEVIEGAPTKNKRTPGE 93
Query: 315 VMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGFSDSS 374
+P E+ L R A++ V F+ L+ D++
Sbjct: 94 WIPRPPEKYSLTGHR-------ASITRVIFHPIFG---------------LMVSASEDAT 131
Query: 375 LKVWDMAKLGQQAVSSGLQGENDTTPREDI-IGPNGR----------------KRSYTLY 417
+K+WD + G+ S L+G D+ +D+ G+ ++SY
Sbjct: 132 IKIWDF-ETGEYERS--LKGHTDSV--QDVAFDSQGKLLASCSADLSIKLWDFQQSYECV 186
Query: 418 Q---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
+ GH V S +F P GD++LS+S D TI++W + Y GH V V+ + +
Sbjct: 187 KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV--------------------RWH 514
G FA+ S+D T R+W M+ + H V+C+ + H
Sbjct: 247 GSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGH 306
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++A+GS DKT+R+WDVS G C+ GH + + LA P G+Y+ S +D TI +W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 575 DLASGRCVTPLMGH 588
DL + RC+ L H
Sbjct: 367 DLRNKRCMKTLYAH 380
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 381 AKL--GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
AKL ++ V G +N TP E I P Y+L GH + F P+ ++S
Sbjct: 70 AKLTEAEKEVIEGAPTKNKRTPGEWIPRP---PEKYSL-TGHRASITRVIFHPIFGLMVS 125
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR-IQP 497
+S D TI++W + KGH V DV F+ QG AS S D + ++W + +
Sbjct: 126 ASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDSQGKLLASCSADLSIKLWDFQQSYEC 185
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++ M GH +V V + +Y+ + S D+T+++W+V++G CV+ + GHR + + +
Sbjct: 186 VKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTG 617
+G A+ D TI +W + S C L H V +A+ + G
Sbjct: 246 EGSIFATCSNDHTIRVWLMNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 618 FLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVL 659
+G LASGS D T+++WDV+ +L
Sbjct: 306 HH--------------QGPFLASGSRDKTIRIWDVSVGLCLL 333
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G F+ S S D TIR+W + L+ GH+ V + F+P G Y S+S D+T R+W +
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ ++ + H + +H Y+ +GS D+TV++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 34/119 (28%)
Query: 543 FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLL 602
GHR+ I + P M S ED TI +WD +G L GHT V +A+
Sbjct: 104 LTGHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAF----- 158
Query: 603 VTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVLKT 661
+G LLAS SAD ++KLWD S + +KT
Sbjct: 159 -----------------------------DSQGKLLASCSADLSIKLWDFQQSYECVKT 188
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 62/374 (16%)
Query: 253 EGENKEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPD 310
E KEA++ ++ G K+ S+ +L+K K + AK + E + AP
Sbjct: 31 EAFRKEADLSTEAEKKFGGLLEKKWTSVIRLQK-KVMELEAKLTEAEKEVIEGAPTKNKR 89
Query: 311 LALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
+P E+ L R A++ V F+ L+
Sbjct: 90 TPGEWIPRPPEKYSLTGHR-------ASITRVIFHPIFG---------------LMVSAS 127
Query: 371 SDSSLKVWDMAKLGQ------------QAVSSGLQGENDTTPREDI-IGPNGRKRSYTLY 417
D+++K+WD + G+ Q V+ QG+ + D+ I ++SY
Sbjct: 128 EDATIKIWDF-ETGEYERTLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQSYECV 186
Query: 418 Q---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
+ GH V S +F P GD++LS+S D TI++W + Y GH V V+ + +
Sbjct: 187 KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV--------------------RWH 514
G FA+ S+D T R+W + + H V+C+ + H
Sbjct: 247 GSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGH 306
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++A+GS DKT+R+WDVS G+C+ GH + + LA P G+Y+ S +D TI +W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 575 DLASGRCVTPLMGH 588
DL + RC+ L H
Sbjct: 367 DLRNKRCMKTLYAH 380
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 21/282 (7%)
Query: 381 AKL--GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
AKL ++ V G +N TP E I P + Y+L GH + F P+ ++S
Sbjct: 70 AKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEK---YSL-TGHRASITRVIFHPIFGLMVS 125
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR-IQP 497
+S D TI++W + KGH V DV F+ QG S S D + ++W + +
Sbjct: 126 ASEDATIKIWDFETGEYERTLKGHTDSVQDVAFDAQGKLLVSCSADLSIKLWDFQQSYEC 185
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++ M GH +V V + +Y+ + S D+T+++W+V++G CV+ + GHR + + +
Sbjct: 186 VKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTG 617
+G A+ D TI +W S C L H V +A+ + G
Sbjct: 246 EGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 618 FLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVL 659
+G LASGS D T+++WDV+ +L
Sbjct: 306 HH--------------QGPFLASGSRDKTIRIWDVSVGQCLL 333
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH + V F+P S+S D T +IW + + R + GH V V + +
Sbjct: 106 GHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERTLKGHTDSVQDVAFDAQGKLL 165
Query: 521 ATGSSDKTVRLWDVS-SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
+ S+D +++LWD S ECV+ GH + S+A P G Y+ S D TI MW++A+G
Sbjct: 166 VSCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 580 RCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLA 639
CV GH W R + EGS+ A
Sbjct: 226 YCVKTYTGHRE--WVRMVRVHI--------------------------------EGSIFA 251
Query: 640 SGSADCTVKLWDVTTSTKVLKTE 662
+ S D T+++W T++K K E
Sbjct: 252 TCSNDHTIRVW--LTNSKDCKVE 272
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G F+ S S D TIR+W + L+ GH+ V + F+P G Y S+S D+T R+W +
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ ++ + H + +H Y+ +GS D+TV++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 162/374 (43%), Gaps = 62/374 (16%)
Query: 253 EGENKEAEIDENKKRPVEG--GKQGASIKKLKKDKAINATAKTSRLEANTVSTAPRVKPD 310
E KEA++ ++ G K+ S+ +L+K K + AK + E + AP
Sbjct: 31 EAFRKEADLSTEAEKKFGGLLEKKWTSVIRLQK-KVMELEAKLTEAEKEVIEGAPTKNKR 89
Query: 311 LALPVMPTEVEQSILEDLRNRVHLSSAALPSVSFYTFINTHNGLNCASISQDGSLVAGGF 370
+P E+ L R A++ V F+ L+
Sbjct: 90 TPGEWIPRPPEKYSLTGHR-------ASITRVIFHPIFG---------------LMVSAS 127
Query: 371 SDSSLKVWDMAKLGQ------------QAVSSGLQGENDTTPREDI-IGPNGRKRSYTLY 417
D+++K+WD + G+ Q V+ QG+ + D+ I ++SY
Sbjct: 128 EDATIKIWDF-ETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECV 186
Query: 418 Q---GHSGPVYSASFSPLGDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQ 474
+ GH V S +F P GD++LS+S D TI++W + Y GH V V+ + +
Sbjct: 187 KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 475 GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCV--------------------RWH 514
G FA+ S+D T R+W + + H V+C+ + H
Sbjct: 247 GSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGH 306
Query: 515 INCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMW 574
++A+GS DKT+R+WDVS G+C+ GH + + LA P G+Y+ S +D TI +W
Sbjct: 307 HQGPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Query: 575 DLASGRCVTPLMGH 588
DL + RC+ L H
Sbjct: 367 DLRNKRCMKTLYAH 380
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 21/282 (7%)
Query: 381 AKL--GQQAVSSGLQGENDTTPREDIIGPNGRKRSYTLYQGHSGPVYSASFSPLGDFILS 438
AKL ++ V G +N TP E I P + Y+L GH + F P+ ++S
Sbjct: 70 AKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEK---YSL-TGHRASITRVIFHPIFGLMVS 125
Query: 439 SSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDR-IQP 497
+S D TI++W + KGH V DV F+ QG AS S D + ++W + +
Sbjct: 126 ASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYEC 185
Query: 498 LRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWDVSSGECVRIFIGHRSMILSLAMSP 557
++ M GH +V V + +Y+ + S D+T+++W+V++G CV+ + GHR + + +
Sbjct: 186 VKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 558 DGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTG 617
+G A+ D TI +W S C L H V +A+ + G
Sbjct: 246 EGSIFATCSNDHTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 618 FLFYSLTIIYFGCASCEGSLLASGSADCTVKLWDVTTSTKVL 659
+G LASGS D T+++WDV+ +L
Sbjct: 306 HH--------------QGPFLASGSRDKTIRIWDVSVGQCLL 333
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
Query: 461 GHNYPVWDVQFNPQGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVRWHINCNYI 520
GH + V F+P S+S D T +IW + + R + GH V V + +
Sbjct: 106 GHRASITRVIFHPIFGLMVSASEDATIKIWDFETGEYERSLKGHTDSVQDVAFDAQGKLL 165
Query: 521 ATGSSDKTVRLWDVS-SGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASG 579
A+ S+D +++LWD S ECV+ GH + S+A P G Y+ S D TI MW++A+G
Sbjct: 166 ASCSADLSIKLWDFQQSYECVKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG 225
Query: 580 RCVTPLMGHTSCVWTLAYRFLLLVTNAYLKISDKVSTGFLFYSLTIIYFGCASCEGSLLA 639
CV GH W R + EGS+ A
Sbjct: 226 YCVKTYTGHRE--WVRMVRVHI--------------------------------EGSIFA 251
Query: 640 SGSADCTVKLWDVTTSTKVLKTE 662
+ S D T+++W T++K K E
Sbjct: 252 TCSNDHTIRVW--LTNSKDCKVE 272
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 433 GDFILSSSADTTIRLWSTKLNANLVCYKGHNYPVWDVQFNPQGHYFASSSHDRTARIWSM 492
G F+ S S D TIR+W + L+ GH+ V + F+P G Y S+S D+T R+W +
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 493 DRIQPLRIMAGHLSDVDCVRWHINCNYIATGSSDKTVRLWD 533
+ ++ + H + +H Y+ +GS D+TV++W+
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,207,780
Number of Sequences: 539616
Number of extensions: 11022834
Number of successful extensions: 55563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 651
Number of HSP's that attempted gapping in prelim test: 32433
Number of HSP's gapped (non-prelim): 11785
length of query: 704
length of database: 191,569,459
effective HSP length: 125
effective length of query: 579
effective length of database: 124,117,459
effective search space: 71864008761
effective search space used: 71864008761
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)